Psyllid ID: psy4974
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 345 | 2.2.26 [Sep-21-2011] | |||||||
| Q8R164 | 291 | Valacyclovir hydrolase OS | yes | N/A | 0.721 | 0.855 | 0.301 | 4e-35 | |
| Q86WA6 | 291 | Valacyclovir hydrolase OS | yes | N/A | 0.721 | 0.855 | 0.301 | 1e-34 | |
| A1JMX1 | 278 | Putative aminoacrylate hy | yes | N/A | 0.6 | 0.744 | 0.244 | 3e-05 | |
| A4VQH7 | 265 | Putative aminoacrylate hy | yes | N/A | 0.553 | 0.720 | 0.221 | 7e-05 | |
| C9Y0S4 | 267 | Putative aminoacrylate hy | yes | N/A | 0.489 | 0.632 | 0.244 | 0.0001 | |
| P23106 | 281 | 2-hydroxymuconate semiald | yes | N/A | 0.594 | 0.729 | 0.225 | 0.0002 | |
| Q52532 | 283 | 2-hydroxy-6-oxononadiened | N/A | N/A | 0.498 | 0.607 | 0.238 | 0.0002 | |
| B2JQW2 | 288 | 2-hydroxy-6-oxononadiened | yes | N/A | 0.489 | 0.586 | 0.235 | 0.0004 | |
| D4GEU7 | 275 | Putative aminoacrylate hy | yes | N/A | 0.669 | 0.84 | 0.232 | 0.0007 |
| >sp|Q8R164|BPHL_MOUSE Valacyclovir hydrolase OS=Mus musculus GN=Bphl PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 20/269 (7%)
Query: 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
T ++ G + + + G G + G+LG + F QL + + K FT + WDP
Sbjct: 40 TSAKVAVNGVHLHYQRVGEGEHAILLLPGMLGSGKTDFAPQLQSLNKKRFTLVAWDP--- 96
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLS 192
GYG S P R F P + E D A +L+K L +VSL GW DGG +
Sbjct: 97 ----------RGYGYSRPPDRDF-PRDFFERDAKDAVDLMKALQFKQVSLLGWSDGGITA 145
Query: 193 FVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS--EVLKAYDNDVNY 250
+ + KYP + K+VIWG +++T ++ R+++G+R +S WS AR E L YD Y
Sbjct: 146 LIAAAKYPSYIRKMVIWGANAYVTEEDSRIYQGIRDVSKWSEKARKPLEALYGYD----Y 201
Query: 251 ITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF 310
+ +VD ++ + N+ + LLP V P L+ H D +V LL +K
Sbjct: 202 LAKTCEDWVDGISQFKQLPEGNICRHLLPLVQCPTLIVHGEKDPLVPRFHADFLLQHVKG 261
Query: 311 CQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ + G H+ H++ FN + +F+
Sbjct: 262 SRLHLMPEGKHNLHLRFADEFNRLVEDFL 290
|
Serine hydrolase that catalyzes the hydrolytic activation of amino acid ester prodrugs of nucleoside analogs such as valacyclovir and valganciclovir. Activates valacyclovir to acyclovir. May play a role in detoxification processes. It is a specific alpha-amino acid ester hydrolase that prefers small, hydrophobic, and aromatic side chains and does not have a stringent requirement for the leaving group other than preferring a primary alcohol. Mus musculus (taxid: 10090) EC: 3EC: .EC: 1EC: .EC: -EC: .EC: - |
| >sp|Q86WA6|BPHL_HUMAN Valacyclovir hydrolase OS=Homo sapiens GN=BPHL PE=1 SV=1 | Back alignment and function description |
|---|
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 126/269 (46%), Gaps = 20/269 (7%)
Query: 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
T ++ G + + + G G + G+LG F QL + KLFT + WDP
Sbjct: 40 TSAKVAVNGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDP--- 96
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLS 192
GYG S P R F P + E D A +L+K L KVSL GW DGG +
Sbjct: 97 ----------RGYGHSRPPDRDF-PADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITA 145
Query: 193 FVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS--EVLKAYDNDVNY 250
+ + KYP +HK+VIWG +++T ++ ++EG+R +S WS R E L YD Y
Sbjct: 146 LIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYD----Y 201
Query: 251 ITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF 310
++VD + N+ + LLP V P L+ H D +V + +K
Sbjct: 202 FARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKG 261
Query: 311 CQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ + G H+ H++ FN+++ +F+
Sbjct: 262 SRLHLMPEGKHNLHLRFADEFNKLAEDFL 290
|
Serine hydrolase that catalyzes the hydrolytic activation of amino acid ester prodrugs of nucleoside analogs such as valacyclovir and valganciclovir. Activates valacyclovir to acyclovir. May play a role in detoxification processes. It is a specific alpha-amino acid ester hydrolase that prefers small, hydrophobic, and aromatic side chains and does not have a stringent requirement for the leaving group other than preferring a primary alcohol. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|A1JMX1|RUTD_YERE8 Putative aminoacrylate hydrolase RutD OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 30/237 (12%)
Query: 126 FWDPPGNVVLYLLGK-----TCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKV 180
FW P L LG+ T YG G +P Y D+A EL LL +
Sbjct: 28 FWQPQ----LSALGQHFRVITYDQYGTGRSAG--VIPSGYTL--ADMADELADLLASQHI 79
Query: 181 SLF---GWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRL---SNWSP 234
+ G GG + ++ +P V +LV + L R F + L S +
Sbjct: 80 ERYHFVGHALGGMIGLQLALSHPQCVERLVAINSWPVLDSQTRRCFHVRQDLLLNSGVAA 139
Query: 235 MARSEVLKAYDND-VNYITGIFNQ--------YVDMVNLI--FKSYGRNVYQELLPYVDV 283
R++ L Y D ++ T + Q + M NL+ + ++ +LP++
Sbjct: 140 YVRAQPLFLYPADWLSRNTLLLEQEEVQQIAHFQGMENLLRRLNALMNADFRSVLPHITT 199
Query: 284 PVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340
P L + DD++V Q+L L ++ Q S GGH+ + + + FN I +++L
Sbjct: 200 PTLALCATDDLLVPYPCSQALAELLPDGEWAQMSYGGHAMSVTNSEQFNGILLSYLL 256
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) (taxid: 393305) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|A4VQH7|RUTD_PSEU5 Putative aminoacrylate hydrolase RutD OS=Pseudomonas stutzeri (strain A1501) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 151 KGRSFVPFQYIEEDVDIAY-ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIW 209
K + +P Y E + + ELL LG+ + G GG + ++ P ++ LV
Sbjct: 52 KSPANLPAGYSIESMAVELLELLDTLGIRRCHFIGHALGGLVGLQIALLRPQLLQSLVPI 111
Query: 210 GTKSFLTIDNVRVFE-GMRRLSNWSPMA--RSEVLKAYD------------NDVNYITGI 254
S + R F ++ L + P A +++ L Y D +
Sbjct: 112 NAWSSPNPHSARCFAVRLKLLHDSGPAAYVQAQSLFLYPADWIAANSERLARDDAHALAH 171
Query: 255 FNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYY 314
F +++V I ++ E LP + P L+ + DD++V Q+ Q L + + Q
Sbjct: 172 FPPTMNLVRRIEALLAFDIEAE-LPRITTPTLLIANRDDMLVPWQRSQHLADNMPNAQLA 230
Query: 315 QFSSGGHSCHIKHGQVFNEISRNFILEE 342
+ GGH+ + + FN+I + + E+
Sbjct: 231 LLNYGGHASSVSDSEPFNQILLDHLAEQ 258
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Pseudomonas stutzeri (strain A1501) (taxid: 379731) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|C9Y0S4|RUTD_CROTZ Putative aminoacrylate hydrolase RutD OS=Cronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 80/213 (37%), Gaps = 44/213 (20%)
Query: 148 SLPKGRSFVPFQYIEEDVDIAYEL---LKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVH 204
+LP+G + D+A EL L L GV + ++ G GG + ++ YP V
Sbjct: 56 TLPEGYTLT---------DMAQELHRALALHGVQRYAVLGHALGGLVGLELALAYPRAVS 106
Query: 205 KLVIWGTKSFLTIDNVRVFEGMRRL-------------------SNWSP--MARSEVLKA 243
LVI L R F+ RL W+ R E +A
Sbjct: 107 ALVIINGWLSLGTWTRRCFDARERLLLDSGPAVYVAAQPLFLYPPQWAQENQPRLEAEEA 166
Query: 244 YDNDVNYITGIFNQYVDMVNLIFKSYGRNV--YQELLPYVDVPVLVFHSADDVMVSTQQV 301
N + NL+ + + Y+E V PV + + DDV+V
Sbjct: 167 LQN---------AHFQGTENLLRRLWALKTADYRERAARVTTPVQLICARDDVLVPWTCS 217
Query: 302 QSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEI 334
Q+L L + +SGGH+C++ Q FN +
Sbjct: 218 QALHEALPHSRLDVMTSGGHACNVTAPQRFNSL 250
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Cronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032) (taxid: 693216) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|P23106|XYLF_PSEPU 2-hydroxymuconate semialdehyde hydrolase OS=Pseudomonas putida GN=xylF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 90/235 (38%), Gaps = 30/235 (12%)
Query: 139 GKTCSGYGQSLPKGRSFVP----FQYIEEDVDIAYE----------LLKLLGVCKVSLFG 184
G T +G +S R P F Y E D Y +L LG+ + + G
Sbjct: 45 GPTGAGSFRSSQTRRVIAPDMLGFGYSERPADGKYSQARWVEHAIGVLDALGIQQGDIVG 104
Query: 185 WCDGGHLSFVFSMKYPHMVHKLVIWGT--KSFLTIDNVRVFEG-------MRRLSNWSPM 235
GG L+ ++++P V +LV+ G+ SF + G MRRL +
Sbjct: 105 NSFGGGLALALAIRHPERVRRLVLMGSVGVSFPITAGLETAWGYTPSLANMRRLLDLFAH 164
Query: 236 ARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQEL------LPYVDVPVLVFH 289
R+ V ++ Y I + + +F +N +L + + LV H
Sbjct: 165 DRTLVNDEL-AELRYQASIRPGFQESFAAMFPPPRQNGVDDLASNETDIRALPNETLVIH 223
Query: 290 SADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344
+D ++ Q +L + Q + F GH I+H + F + NF+ E +
Sbjct: 224 GREDRIIPLQASLTLAQWIPNAQLHVFGQCGHWTQIEHAERFARLVENFLAEADA 278
|
Catalyzes the conversion of 2-hydroxymuconate semialdehyde to 2-hydroxypent-2,4-dienoate. Pseudomonas putida (taxid: 303) EC: 3 EC: . EC: 7 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q52532|MHPC_PSESP 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Pseudomonas sp. GN=mhpC PE=3 SV=1 | Back alignment and function description |
|---|
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 17/189 (8%)
Query: 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF-------LTIDNV 220
A ++ LG+ + + G GG + ++ YP MV KLV+ G S + + +
Sbjct: 93 AKGVMDKLGIKRAHMIGNSMGGATAMRMAVDYPEMVGKLVMMGGGSVGGSTTTPMPTEGL 152
Query: 221 RVFEGMRR---LSNWSPMARSEVLKAYDNDVNYITGIFNQYV-------DMVNLIFKSYG 270
++ +G+ R + N M V I G F + + V + S G
Sbjct: 153 KLLQGLYRNPSMENLRKMLDIFVYAPSTLTEELINGRFENMMRRPEHLTNFVESLKASGG 212
Query: 271 RNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQV 330
R Y LLP + +P ++ DD V +L + + + FS GH +H
Sbjct: 213 RANYAHLLPTLTMPTMIIWGRDDRFVPLDLGLRMLWGMPDAELHVFSKCGHWAQWEHADK 272
Query: 331 FNEISRNFI 339
FN++ NF+
Sbjct: 273 FNQLVLNFL 281
|
Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6-oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid. Pseudomonas sp (taxid: 306) EC: 3 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|B2JQW2|MHPC_BURP8 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=mhpC PE=3 SV=1 | Back alignment and function description |
|---|
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 74/187 (39%), Gaps = 18/187 (9%)
Query: 171 LLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF-------LTIDNVRVF 223
+L LG+ + L G GGH + F++ YP V KLV+ G + + + +++
Sbjct: 100 VLDTLGIERAHLVGNSMGGHSAVAFALSYPERVGKLVLMGGGTGGPSQFVPMPTEGIKLL 159
Query: 224 EGMRR---LSNWSPMARSEVLKAYDNDVNYITGIFNQYV---DMVNLIFKSYGRNV---- 273
+G+ R L N M V A + + + D + KS N
Sbjct: 160 QGLYRDPTLENLKKMLNVFVYDASTMTEELMQTRLDNMLARRDHLENFVKSLTANPKQFP 219
Query: 274 -YQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFN 332
Y L + P LV DD V L+ L +++ F GH +H + FN
Sbjct: 220 DYGHRLNEIKAPALVIWGRDDRFVPLDVGLRLVWGLPNAEFHVFGRCGHWAQWEHAERFN 279
Query: 333 EISRNFI 339
++ +F+
Sbjct: 280 QMLLDFL 286
|
Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6-oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid. Burkholderia phymatum (strain DSM 17167 / STM815) (taxid: 391038) EC: 3 EC: . EC: 7 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|D4GEU7|RUTD_PANAM Putative aminoacrylate hydrolase RutD OS=Pantoea ananatis (strain LMG 20103) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 101/262 (38%), Gaps = 31/262 (11%)
Query: 100 YGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPG-------NVVLYLLGKTCSGYGQSLPKG 152
Y VLG+ +N+ + + + FW P VV+Y YG +G
Sbjct: 3 YKVLGQ-QNADAETVVLSSGLGGSGGFWQPQLAMLSAHFRVVVY------DQYGTGASQG 55
Query: 153 RSFVPFQYIEEDV-DIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGT 211
VP Y ED+ D LL L + + L G GG + +++YP ++ LV+
Sbjct: 56 S--VPAGYRMEDMADELAGLLNALNISRCHLVGHALGGIMGLHLALRYPALLQSLVVING 113
Query: 212 KSFLTIDNVRVFEGMRRL---SNWSPMARSEVLKAYDNDVNYITGIFNQ---------YV 259
+ L R F+ R L S +++ L Y D F Q +
Sbjct: 114 WTVLNSQTRRCFDVRRNLLLNSGVDAYVQAQPLFLYPGDWLSEHEAFLQEERQHQVANFQ 173
Query: 260 DMVNLI--FKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFS 317
M NL+ ++ + L V P L + DD++V L ++L ++ Q
Sbjct: 174 GMENLLHRLQALMDSDLTTSLKGVIAPTLALSAKDDLLVPWSCSADLASRLPHGEHLQMG 233
Query: 318 SGGHSCHIKHGQVFNEISRNFI 339
GGH+ + FN I +++
Sbjct: 234 YGGHAMSVTDPDTFNPILLDWL 255
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Pantoea ananatis (strain LMG 20103) (taxid: 706191) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 345 | ||||||
| 270001736 | 278 | hypothetical protein TcasGA2_TC000612 [T | 0.724 | 0.899 | 0.319 | 4e-37 | |
| 328696814 | 283 | PREDICTED: valacyclovir hydrolase-like [ | 0.750 | 0.915 | 0.290 | 3e-35 | |
| 322788700 | 294 | hypothetical protein SINV_05744 [Solenop | 0.739 | 0.867 | 0.276 | 3e-35 | |
| 50734100 | 285 | PREDICTED: valacyclovir hydrolase [Gallu | 0.773 | 0.936 | 0.283 | 4e-35 | |
| 383861416 | 295 | PREDICTED: valacyclovir hydrolase-like [ | 0.759 | 0.888 | 0.287 | 5e-35 | |
| 354502334 | 291 | PREDICTED: valacyclovir hydrolase-like [ | 0.721 | 0.855 | 0.308 | 6e-35 | |
| 291409427 | 291 | PREDICTED: biphenyl hydrolase-like [Oryc | 0.721 | 0.855 | 0.319 | 8e-35 | |
| 194765348 | 278 | GF22862 [Drosophila ananassae] gi|190615 | 0.750 | 0.931 | 0.283 | 2e-34 | |
| 326917049 | 289 | PREDICTED: valacyclovir hydrolase-like [ | 0.730 | 0.871 | 0.279 | 4e-34 | |
| 81295385 | 291 | valacyclovir hydrolase precursor [Rattus | 0.727 | 0.862 | 0.295 | 4e-34 |
| >gi|270001736|gb|EEZ98183.1| hypothetical protein TcasGA2_TC000612 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 137/266 (51%), Gaps = 16/266 (6%)
Query: 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNV 133
E + G I ++K G G + + G LG I + FK Q+ D FT I WDPPG
Sbjct: 26 EQVTKVNGQTINYVKTGQGNRNVLCFPGALGTIWSDFKPQINDLDKGKFTVIAWDPPG-- 83
Query: 134 VLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSF 193
YG S P R+F ++ E D D A++ ++ LGV K SL GW DGG S
Sbjct: 84 -----------YGFSRPPERNFC-LEFYENDADTAHDFMQHLGVKKFSLLGWSDGGISSM 131
Query: 194 VFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITG 253
+ + KYP V KLVIWG S++ D + +E +R +S WS ++ ++K Y +
Sbjct: 132 ILAAKYPQSVEKLVIWGANSYVIPDEIESYEKIRDISKWSDKMKAPLIKLYTE--AGLQK 189
Query: 254 IFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQY 313
++N + D V +++ N+ +E+L + P L+ H D MV+++ L + + +
Sbjct: 190 MWNDWCDAVTEMYEKNHGNICKEILDQIKCPTLILHGDKDPMVASEHPTYLESHIAGARL 249
Query: 314 YQFSSGGHSCHIKHGQVFNEISRNFI 339
Y+F G H+ H+++ FN+I +F+
Sbjct: 250 YRFPDGKHNIHLRYAPEFNKIVTDFL 275
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328696814|ref|XP_001947430.2| PREDICTED: valacyclovir hydrolase-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 16/275 (5%)
Query: 68 HQDVFTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFW 127
H + + I +I ++K G+G Q L G LG I FK Q+ + + +T + W
Sbjct: 24 HAMIEKQTKIKINNIEINYLKVGNGPQTLLLLPGALGSIFTDFKPQIETLNREKYTIVAW 83
Query: 128 DPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCD 187
DPPG YG S P R F P + D D A L+K L + K SL GW D
Sbjct: 84 DPPG-------------YGFSRPPDRDFSP-GFFYRDADYAISLMKSLQIDKYSLLGWSD 129
Query: 188 GGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDND 247
GG + + + K V KL++WG+ +++T ++ ++E +R + WSP R + Y
Sbjct: 130 GGITALIMASKAVDSVEKLIVWGSNAYVTEKDIELYEKIRDVQKWSPRMRQPFIDLYGE- 188
Query: 248 VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQ 307
Y + +N +V+ +I K G ++ +E L +D P L+ H A D +V + L +
Sbjct: 189 -KYFSDTWNAWVNSFQIILKENGGDICREALSKIDAPTLILHGAQDPLVPMEHPVHLHKK 247
Query: 308 LKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342
+K+ + G H+ H+++ ++FN +F+ E+
Sbjct: 248 IKYGSLEIYPEGKHNIHLRYAELFNSAVDDFLAED 282
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322788700|gb|EFZ14293.1| hypothetical protein SINV_05744 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 139/271 (51%), Gaps = 16/271 (5%)
Query: 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNV 133
E + +I + + G G + G LG I FK Q+ + T + WDPPG
Sbjct: 39 ERKIKVDDTEINYARVGRGDHPVLLLPGALGTIWTDFKPQMEGLNADKLTIVSWDPPG-- 96
Query: 134 VLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSF 193
YG+S P R+F P + + D A+ L+K LG K SL GW DGG S
Sbjct: 97 -----------YGKSRPPDRTF-PDDFFQRDAAYAHNLMKTLGYSKFSLIGWSDGGITSL 144
Query: 194 VFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITG 253
+ + YP + ++V++G +++ D +++E +R ++ WS R+ +++ Y D Y +
Sbjct: 145 LLASAYPDSIRRMVVFGANAYIHPDETKIYESIRDINKWSEKMRTPMIQIYGKD--YFSK 202
Query: 254 IFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQY 313
+++ ++D V +++ N+ +E+LP + P L+ H A D MV + L + +
Sbjct: 203 MWSDWIDGVLRLYEKQNGNLCKEVLPNIKCPTLIIHGAKDAMVLPEHPIYLKQNISNSKL 262
Query: 314 YQFSSGGHSCHIKHGQVFNEISRNFILEENK 344
+ F G H+ H+++ + FN++ +F+L+++K
Sbjct: 263 HIFEKGAHNLHLRYAEEFNKLVMDFLLDQSK 293
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|50734100|ref|XP_418972.1| PREDICTED: valacyclovir hydrolase [Gallus gallus] | Back alignment and taxonomy information |
|---|
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 140/286 (48%), Gaps = 19/286 (6%)
Query: 54 TLLDTQLPSRTDFIHQDVFTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQ 113
LL T+ P+ + + T + G ++ + + G G+ + G+LG + F Q
Sbjct: 18 ALLTTRGPAAS---YGTSITSAKIQVNGVNLHYQQTGEGSHAVLLLPGMLGSGQTDFGPQ 74
Query: 114 LTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173
L + + KLFT + WDP GYGQS+P R F P + E D A +L++
Sbjct: 75 LKSMNKKLFTIVAWDP-------------RGYGQSIPPSRDFPP-DFFERDAKDAVDLMQ 120
Query: 174 LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWS 233
L K SL GW DGG + + + KYP ++HKLV+WG + +T ++VR++ G+R +S WS
Sbjct: 121 ALKFKKFSLLGWSDGGITALIAAAKYPALIHKLVVWGANASVTQEDVRIYNGIRDVSKWS 180
Query: 234 PMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADD 293
+ + + Y + Y +VD + + G ++ Q+LLP++ P L+ H D
Sbjct: 181 EKVKKPLEELYGH--KYFAETCEAWVDGIARFAEKPGGSICQQLLPHIQCPTLIIHGEKD 238
Query: 294 VMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+V + + +K + + G H+ H++ + FN F+
Sbjct: 239 PLVPRFHAEYIHEHIKGSRLHLMPEGKHNLHLRFAEEFNREVEEFL 284
|
Source: Gallus gallus Species: Gallus gallus Genus: Gallus Family: Phasianidae Order: Galliformes Class: Aves Phylum: Chordata Superkingdom: Eukaryota |
| >gi|383861416|ref|XP_003706182.1| PREDICTED: valacyclovir hydrolase-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 140/278 (50%), Gaps = 16/278 (5%)
Query: 64 TDFIHQDVFTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFT 123
+ I + E ++ G +I ++K G+G + G++G I N F Q+ D K FT
Sbjct: 34 SSMILNNATEERKINVDGININYLKVGTGEHPILLLPGIMGTIWNDFGPQVKNLDRKKFT 93
Query: 124 SIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLF 183
I WDPPG YG+S P RSF Y++ D A L+KLLG K SL
Sbjct: 94 LIAWDPPG-------------YGKSRPPERSFTD-DYLQRDAITARNLMKLLGYTKFSLL 139
Query: 184 GWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKA 243
GW DGG+ S + + +P V K++ S++T++ V +++ ++ + NWS R+ +L
Sbjct: 140 GWSDGGNTSLLLASMFPENVRKMIGIAPHSYMTLEEVNIYKKLKNIDNWSEKMRTPILAV 199
Query: 244 YDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQS 303
Y + Y + +VDMV +++ ++ ++ L + P L+ + D +V +
Sbjct: 200 YGAE--YFRKTCSDWVDMVERVYEKQNGDICRQSLAKIKCPTLIVYGNKDAIVVPEHPVY 257
Query: 304 LLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341
L + + F +GGHS H+++ + FN+++ F+ E
Sbjct: 258 LKEHIAGAKLEIFENGGHSLHLRYPEKFNDLATRFLTE 295
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|354502334|ref|XP_003513242.1| PREDICTED: valacyclovir hydrolase-like [Cricetulus griseus] gi|344259035|gb|EGW15139.1| Valacyclovir hydrolase [Cricetulus griseus] | Back alignment and taxonomy information |
|---|
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
T ++ G + + + G G + G+LG F QL + + K FT + WDP
Sbjct: 40 TSAKVAVNGVHLHYQRTGEGEHAVLLLPGMLGSGSTDFAPQLQSLNKKRFTVVAWDP--- 96
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLS 192
GYGQS P R F P + E D A +L+K+L +VSL GW DGG +
Sbjct: 97 ----------RGYGQSRPPDRDF-PQDFFERDAKDAVDLMKVLQFKQVSLLGWSDGGITA 145
Query: 193 FVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS--EVLKAYDNDVNY 250
+ + KYP +HK+VIWG +++T ++ R+++G+R +S WS AR E L YD Y
Sbjct: 146 LIAAAKYPSYIHKMVIWGANAYVTEEDSRIYQGIRDVSKWSEKARKPLEALYGYD----Y 201
Query: 251 ITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF 310
++VD +N N+ + LLP V P L+ H D +V L +K
Sbjct: 202 FAKTCEKWVDGINQFKHLPDGNICRHLLPLVQCPTLIVHGEKDPLVPRFHADFLHKHVKG 261
Query: 311 CQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ + G H+ H++ FN+++ +F+
Sbjct: 262 SRLHLMPEGKHNLHLRFANEFNKLAEDFL 290
|
Source: Cricetulus griseus Species: Cricetulus griseus Genus: Cricetulus Family: Cricetidae Order: Rodentia Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|291409427|ref|XP_002721010.1| PREDICTED: biphenyl hydrolase-like [Oryctolagus cuniculus] | Back alignment and taxonomy information |
|---|
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 127/269 (47%), Gaps = 20/269 (7%)
Query: 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
T ++ G + + + G G + G+LG F QL KLFT + WDP
Sbjct: 40 TSAKVAVNGVHLHYQRTGEGEHAVLLLPGMLGSGETDFGPQLKNLSKKLFTVVAWDP--- 96
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLS 192
GYG S P R F P + E D A +L+K L KVSL GW DGG +
Sbjct: 97 ----------RGYGHSRPPDRDF-PVDFFERDARDAIDLMKALQFKKVSLLGWSDGGITA 145
Query: 193 FVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS--EVLKAYDNDVNY 250
+ + KYP V K+VIWG +++T ++VR+++G+R +S WS AR E L YD Y
Sbjct: 146 LIAAAKYPSYVRKMVIWGANAYVTDEDVRIYQGIRDVSKWSEKARKPLEALYGYD----Y 201
Query: 251 ITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF 310
Q+VD + + N+ Q LLP V P L+ H D +V L +K
Sbjct: 202 FAKTCEQWVDGIQQFKRLPDGNICQHLLPLVQCPTLIVHGEKDPLVPRFHADFLHEHVKG 261
Query: 311 CQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ + G H+ H++ FN++ +F+
Sbjct: 262 SRLHLMPEGKHNLHLRFANEFNKLVEDFL 290
|
Source: Oryctolagus cuniculus Species: Oryctolagus cuniculus Genus: Oryctolagus Family: Leporidae Order: Lagomorpha Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|194765348|ref|XP_001964789.1| GF22862 [Drosophila ananassae] gi|190615061|gb|EDV30585.1| GF22862 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 136/279 (48%), Gaps = 20/279 (7%)
Query: 63 RTDFIHQDVFTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKL- 121
R+ F+++ + TE + G D+ ++ GSG + L G LG FK Q+ PKL
Sbjct: 10 RSPFLNRMLHTERKVRVNGADLNIVESGSGNRSLLLMPGALGSAWTDFKPQIEQL-PKLL 68
Query: 122 --FTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCK 179
+T I WDPPG YG+S+P R F ++ ED A +L++ L K
Sbjct: 69 PEYTIIAWDPPG-------------YGKSVPPKRQFG-LEFFREDAKAAVDLMRALDRPK 114
Query: 180 VSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSE 239
S+ GW DGG + + + +Y V +L IWG ++L D V+ +R +S WSP R
Sbjct: 115 FSILGWSDGGITALIVAGRYAEAVDRLAIWGAGAYLNADEVKALRNIRDVSKWSPRMREP 174
Query: 240 VLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ 299
+ K Y V+ ++ ++VD + + + + V P + H D M++ +
Sbjct: 175 MEKVY--GVDRFAQLWGEWVDAACAFYDQRDGDFCRNEVEQVKAPTFILHGKKDPMIAAE 232
Query: 300 QVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNF 338
+ L +L +Y++F G H+ H+++ + FN++ +F
Sbjct: 233 HIPWLKERLPKAKYHEFPEGKHNIHLRYAEDFNKLVADF 271
|
Source: Drosophila ananassae Species: Drosophila ananassae Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|326917049|ref|XP_003204817.1| PREDICTED: valacyclovir hydrolase-like [Meleagris gallopavo] | Back alignment and taxonomy information |
|---|
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 132/268 (49%), Gaps = 16/268 (5%)
Query: 72 FTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPG 131
T + G ++ + + G G+ + G+LG + F QL + + +LFT + WDP
Sbjct: 37 ITSAKIQVNGVNLHYQQTGEGSHAVLLLPGMLGSGQTDFGPQLKSMNKQLFTIVAWDP-- 94
Query: 132 NVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHL 191
GYGQS+P R F P + E D A +L++ L K SL GW DGG
Sbjct: 95 -----------RGYGQSIPPSRDFPP-DFFERDAKDAVDLMQALKFKKFSLLGWSDGGIT 142
Query: 192 SFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYI 251
+ + + KYP ++HK+V+WG + +T ++VR++ G+R +S WS + + + Y + Y
Sbjct: 143 ALIAAAKYPALIHKMVVWGANASVTQEDVRIYNGIRDVSKWSEKVKKPLEELYGH--KYF 200
Query: 252 TGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFC 311
+VD + + G ++ Q+LLP++ P L+ H D +V + + +K
Sbjct: 201 AETCEAWVDGIARFAEKSGGSICQQLLPHIKCPTLIIHGEKDPLVPRFHAEYIHEHIKGS 260
Query: 312 QYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ + G H+ H++ + FN F+
Sbjct: 261 RLHLMPEGKHNLHLRFAEEFNREVEEFL 288
|
Source: Meleagris gallopavo Species: Meleagris gallopavo Genus: Meleagris Family: Phasianidae Order: Galliformes Class: Aves Phylum: Chordata Superkingdom: Eukaryota |
| >gi|81295385|ref|NP_001032283.1| valacyclovir hydrolase precursor [Rattus norvegicus] gi|77748370|gb|AAI05909.1| Biphenyl hydrolase-like (serine hydrolase) [Rattus norvegicus] | Back alignment and taxonomy information |
|---|
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 129/267 (48%), Gaps = 16/267 (5%)
Query: 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
T ++ G + + + G G + G+LG + F QL + + K FT + WDP
Sbjct: 40 TSAKAAVNGIHLHYQRVGEGEHAVLLLPGMLGSGKTDFAPQLQSLNKKRFTLVAWDP--- 96
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLS 192
GYG+S P R F P + E D A +L+K L +VSL GW DGG +
Sbjct: 97 ----------RGYGESRPPDRDF-PRDFFERDAKDAVDLMKALQFKQVSLLGWSDGGITA 145
Query: 193 FVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYIT 252
+ + KYP + K+VIWG +++T ++ R+++G+R +S WS AR + Y +D Y
Sbjct: 146 LIAAAKYPSYIRKMVIWGANAYVTEEDSRIYQGIRDVSKWSEKARKPLEALYGHD--YFA 203
Query: 253 GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQ 312
++VD +N N+ + LLP + P L+ H D +V LL +K +
Sbjct: 204 KTCEKWVDGINQFKHLPDGNICRHLLPLIQCPTLIVHGEKDPLVPRFHADFLLEHVKGSR 263
Query: 313 YYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ G H+ H++ FN + +F+
Sbjct: 264 LHLMPEGKHNLHLRFADEFNRLVEDFL 290
|
Source: Rattus norvegicus Species: Rattus norvegicus Genus: Rattus Family: Muridae Order: Rodentia Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 345 | ||||||
| UNIPROTKB|F1P4C6 | 292 | BPHL "Uncharacterized protein" | 0.727 | 0.859 | 0.288 | 4.6e-34 | |
| RGD|1307572 | 291 | Bphl "biphenyl hydrolase-like | 0.713 | 0.845 | 0.297 | 2.5e-33 | |
| MGI|MGI:1915271 | 291 | Bphl "biphenyl hydrolase-like | 0.724 | 0.859 | 0.302 | 8.5e-33 | |
| UNIPROTKB|Q86WA6 | 291 | BPHL "Valacyclovir hydrolase" | 0.727 | 0.862 | 0.295 | 3.7e-32 | |
| UNIPROTKB|E2RGI0 | 291 | BPHL "Uncharacterized protein" | 0.713 | 0.845 | 0.290 | 6e-32 | |
| FB|FBgn0038974 | 278 | CG5377 [Drosophila melanogaste | 0.768 | 0.953 | 0.263 | 1.1e-30 | |
| UNIPROTKB|F1RWY7 | 298 | BPHL "Uncharacterized protein" | 0.724 | 0.838 | 0.257 | 1.1e-23 | |
| UNIPROTKB|B4DML3 | 211 | BPHL "cDNA FLJ58913, highly si | 0.457 | 0.748 | 0.337 | 3.8e-23 | |
| UNIPROTKB|Q49AI2 | 194 | BPHL "BPHL protein" [Homo sapi | 0.457 | 0.814 | 0.337 | 3.8e-23 | |
| UNIPROTKB|Q81WT1 | 257 | BAS3601 "Hydrolase, alpha/beta | 0.513 | 0.688 | 0.223 | 0.00021 |
| UNIPROTKB|F1P4C6 BPHL "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 77/267 (28%), Positives = 132/267 (49%)
Query: 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
T + G ++ + + G G+ + G+LG + F QL + + KLFT + WDP
Sbjct: 41 TSAKIQVNGVNLHYQQTGEGSHAVLLLPGMLGSGQTDFGPQLKSMNKKLFTIVAWDP--- 97
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLS 192
GYGQS+P R F P + E D A +L++ L K SL GW DGG +
Sbjct: 98 ----------RGYGQSIPPSRDFPP-DFFERDAKDAVDLMQALKFKKFSLLGWSDGGITA 146
Query: 193 FVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYIT 252
+ + KYP ++HKLV+WG + +T ++VR++ G+R +S WS + + + Y + Y
Sbjct: 147 LIAAAKYPALIHKLVVWGANASVTQEDVRIYNGIRDVSKWSEKVKKPLEELYGH--KYFA 204
Query: 253 GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQ 312
+VD + + G ++ Q+LLP++ P L+ H D +V + + +K +
Sbjct: 205 ETCEAWVDGIARFAEKPGGSICQQLLPHIQCPTLIIHGEKDPLVPRFHAEYIHEHIKGSR 264
Query: 313 YYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ G H+ H++ + FN F+
Sbjct: 265 LHLMPEGKHNLHLRFAEEFNREVEEFL 291
|
|
| RGD|1307572 Bphl "biphenyl hydrolase-like (serine hydrolase)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 78/262 (29%), Positives = 128/262 (48%)
Query: 78 SIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYL 137
++ G + + + G G + G+LG + F QL + + K FT + WDP
Sbjct: 45 AVNGIHLHYQRVGEGEHAVLLLPGMLGSGKTDFAPQLQSLNKKRFTLVAWDP-------- 96
Query: 138 LGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSM 197
GYG+S P R F P + E D A +L+K L +VSL GW DGG + + +
Sbjct: 97 -----RGYGESRPPDRDF-PRDFFERDAKDAVDLMKALQFKQVSLLGWSDGGITALIAAA 150
Query: 198 KYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQ 257
KYP + K+VIWG +++T ++ R+++G+R +S WS AR + Y +D Y +
Sbjct: 151 KYPSYIRKMVIWGANAYVTEEDSRIYQGIRDVSKWSEKARKPLEALYGHD--YFAKTCEK 208
Query: 258 YVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFS 317
+VD +N N+ + LLP + P L+ H D +V LL +K + +
Sbjct: 209 WVDGINQFKHLPDGNICRHLLPLIQCPTLIVHGEKDPLVPRFHADFLLEHVKGSRLHLMP 268
Query: 318 SGGHSCHIKHGQVFNEISRNFI 339
G H+ H++ FN + +F+
Sbjct: 269 EGKHNLHLRFADEFNRLVEDFL 290
|
|
| MGI|MGI:1915271 Bphl "biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 81/268 (30%), Positives = 129/268 (48%)
Query: 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
T ++ G + + + G G + G+LG + F QL + + K FT + WDP
Sbjct: 40 TSAKVAVNGVHLHYQRVGEGEHAILLLPGMLGSGKTDFAPQLQSLNKKRFTLVAWDP--- 96
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLS 192
GYG S P R F P + E D A +L+K L +VSL GW DGG +
Sbjct: 97 ----------RGYGYSRPPDRDF-PRDFFERDAKDAVDLMKALQFKQVSLLGWSDGGITA 145
Query: 193 FVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYIT 252
+ + KYP + K+VIWG +++T ++ R+++G+R +S WS AR + Y D Y+
Sbjct: 146 LIAAAKYPSYIRKMVIWGANAYVTEEDSRIYQGIRDVSKWSEKARKPLEALYGYD--YLA 203
Query: 253 GIFNQYVDMVNLIFKSYGR-NVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFC 311
+VD ++ FK N+ + LLP V P L+ H D +V LL +K
Sbjct: 204 KTCEDWVDGISQ-FKQLPEGNICRHLLPLVQCPTLIVHGEKDPLVPRFHADFLLQHVKGS 262
Query: 312 QYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ + G H+ H++ FN + +F+
Sbjct: 263 RLHLMPEGKHNLHLRFADEFNRLVEDFL 290
|
|
| UNIPROTKB|Q86WA6 BPHL "Valacyclovir hydrolase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 79/267 (29%), Positives = 125/267 (46%)
Query: 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
T ++ G + + + G G + G+LG F QL + KLFT + WDP
Sbjct: 40 TSAKVAVNGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDP--- 96
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLS 192
GYG S P R F P + E D A +L+K L KVSL GW DGG +
Sbjct: 97 ----------RGYGHSRPPDRDF-PADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITA 145
Query: 193 FVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYIT 252
+ + KYP +HK+VIWG +++T ++ ++EG+R +S WS R + Y D Y
Sbjct: 146 LIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYD--YFA 203
Query: 253 GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQ 312
++VD + N+ + LLP V P L+ H D +V + +K +
Sbjct: 204 RTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSR 263
Query: 313 YYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ G H+ H++ FN+++ +F+
Sbjct: 264 LHLMPEGKHNLHLRFADEFNKLAEDFL 290
|
|
| UNIPROTKB|E2RGI0 BPHL "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 76/262 (29%), Positives = 127/262 (48%)
Query: 78 SIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYL 137
++ G + + + G G + G+LG + F Q+ + KLFT + WDP
Sbjct: 45 AVNGVHLHYQQTGEGEHAVLLLPGMLGSGKTDFGPQIKNLNKKLFTVVAWDP-------- 96
Query: 138 LGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSM 197
GYG S P R F P ++E D A +L+K L KVSL GW DGG + + +
Sbjct: 97 -----RGYGHSRPPDRDF-PMDFLERDAKDAVDLMKTLNFKKVSLLGWSDGGITALIAAA 150
Query: 198 KYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQ 257
KYP ++K+VIWG +++T ++ ++++G+R +S WS R + Y D Y +
Sbjct: 151 KYPLYINKMVIWGANAYVTDEDEKIYQGIRDVSKWSEKTRKPLETLYGYD--YFAKTCEK 208
Query: 258 YVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFS 317
+VD + N+ + LLP V P L+ H D +V V + +K + +
Sbjct: 209 WVDGMQQFKHLPDGNICRHLLPLVQCPTLIVHGEKDPLVPRPHVDFIHKHVKGSRLHLMP 268
Query: 318 SGGHSCHIKHGQVFNEISRNFI 339
G H+ H++ FN++ +F+
Sbjct: 269 EGKHNLHLRFADEFNKLVEDFL 290
|
|
| FB|FBgn0038974 CG5377 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 75/285 (26%), Positives = 136/285 (47%)
Query: 62 SRTDFIHQDVFTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKL 121
+R+ + + TE + G D+ ++ GSG + L G LG F+ Q+ PKL
Sbjct: 11 ARSPITRRLLHTERKVRVNGSDLNIVESGSGERSLLLMPGALGSSWTDFRPQIEQL-PKL 69
Query: 122 F---TSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVC 178
T I WDPPG YG+S+P R F ++ ED A +L++ L
Sbjct: 70 LPGHTIIAWDPPG-------------YGKSVPPQRKF-GLEFFREDAQAAVDLMRALDRP 115
Query: 179 KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS 238
+ S+ GW DGG + + + ++ V +L IWG ++L D V+ + +R ++ WSP R
Sbjct: 116 RFSILGWSDGGITALIVAGRHAEAVDRLAIWGAGAYLNADEVKALKNIRDVAKWSPRMRE 175
Query: 239 EVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST 298
+ K Y V ++ ++VD + + + + + +P + H D M++
Sbjct: 176 PMEKVYG--VERFPQLWAEWVDAACAFYDQRNGDFCRTEVEKIKIPTFILHGKKDPMIAA 233
Query: 299 QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343
+ + L +L +YY+F G H+ H+++ + FN++ +F + N
Sbjct: 234 EHIPWLRERLPHAEYYEFPEGKHNIHLRYAEEFNKLVADFFNKNN 278
|
|
| UNIPROTKB|F1RWY7 BPHL "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 69/268 (25%), Positives = 119/268 (44%)
Query: 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
T ++ G + +++ G G + G+LG F Q+ A + KLFT + WDP
Sbjct: 40 TSARVAVNGVHLHYLQTGEGEHAVLLLPGMLGSGETDFGPQIEALNKKLFTVVAWDP--- 96
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLS 192
GYG+S P R F P ++ E D + A L+K L + GW +GG S
Sbjct: 97 ----------RGYGRSRPPDRDF-PREFFERDAEDAIGLMKSLHFLLLGSCGWGEGGITS 145
Query: 193 FVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYIT 252
+ Y + V+W S+ + + ++G+R +S WS R + Y D Y
Sbjct: 146 ITLAASYKFCITSNVLWAAGSYSSDLDRGWYQGIRDVSKWSERTRKPLEALYGFD--YFA 203
Query: 253 GIFNQYVDMVNLIFKSYGR-NVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFC 311
++VD + + FK N+ + LLP V P L+ H D +V + ++
Sbjct: 204 RTCEKWVDGI-MQFKRLPEGNICRHLLPLVQCPTLIVHGEKDPLVPRFHADYIHEHVRGS 262
Query: 312 QYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ + G H+ H++ FN+++ +F+
Sbjct: 263 RLHLMPEGKHNLHLRFADEFNKLAEDFL 290
|
|
| UNIPROTKB|B4DML3 BPHL "cDNA FLJ58913, highly similar to Valacyclovir hydrolase (EC 3.1.-.-)" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 58/172 (33%), Positives = 85/172 (49%)
Query: 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
T ++ G + + + G G + G+LG F QL + KLFT + WDP
Sbjct: 40 TSAKVAVNGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDP--- 96
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLS 192
GYG S P R F P + E D A +L+K L KVSL GW DGG +
Sbjct: 97 ----------RGYGHSRPPDRDF-PADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITA 145
Query: 193 FVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAY 244
+ + KYP +HK+VIWG +++T ++ ++EG+R +S WS R + Y
Sbjct: 146 LIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALY 197
|
|
| UNIPROTKB|Q49AI2 BPHL "BPHL protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 58/172 (33%), Positives = 85/172 (49%)
Query: 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
T ++ G + + + G G + G+LG F QL + KLFT + WDP
Sbjct: 23 TSAKVAVNGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDP--- 79
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLS 192
GYG S P R F P + E D A +L+K L KVSL GW DGG +
Sbjct: 80 ----------RGYGHSRPPDRDF-PADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITA 128
Query: 193 FVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAY 244
+ + KYP +HK+VIWG +++T ++ ++EG+R +S WS R + Y
Sbjct: 129 LIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALY 180
|
|
| UNIPROTKB|Q81WT1 BAS3601 "Hydrolase, alpha/beta fold family" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
|---|
Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
Identities = 42/188 (22%), Positives = 83/188 (44%)
Query: 162 EEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN-- 219
+E V++ YEL K L + KV + G G + F+++YP V L+I +L ++
Sbjct: 66 KEYVNVLYELCKYLKLQKVVICGLSKGARVGIDFAIQYPDFVSSLIIVNAFPYLEPEDRK 125
Query: 220 --VRVFEGMRRLSNWSPMARS--EVLKAYDNDVNYITGIFN--QYVDMVNL--IFKSYGR 271
+ V++ + N A + E + N+V + G + Q ++ V++ +F
Sbjct: 126 KRLEVYDLLSLHDNGKKWADTLLEEMGVASNEV-IVRGFYQSLQSINPVHIQRLFAELVD 184
Query: 272 NVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVF 331
+ LL + L+ +D V + V+ +LK + +F + GH +++ F
Sbjct: 185 YDQRPLLLNISCSTLIIRGENDDFVPEKYVREFERRLKNTTFIEFKNSGHLPYLEQPSSF 244
Query: 332 NEISRNFI 339
N F+
Sbjct: 245 NMTVEKFL 252
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q86WA6 | BPHL_HUMAN | 3, ., 1, ., -, ., - | 0.3011 | 0.7217 | 0.8556 | yes | N/A |
| Q8R164 | BPHL_MOUSE | 3, ., 1, ., -, ., - | 0.3011 | 0.7217 | 0.8556 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 345 | |||
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 5e-15 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 6e-13 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 9e-04 | |
| TIGR03611 | 248 | TIGR03611, RutD, pyrimidine utilization protein D | 0.003 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 73.9 bits (180), Expect = 5e-15
Identities = 46/296 (15%), Positives = 80/296 (27%), Gaps = 52/296 (17%)
Query: 76 FFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKL--FTSIFWDPPGNV 133
+ G + + + G G L +G G ++ + I D G
Sbjct: 4 LLAADGVRLAYREAGGGGPPLVLLHGFPGSSSV-WRPVFKVLPALAARYRVIAPDLRG-- 60
Query: 134 VLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSF 193
GRS + D LL LG+ KV L G GG ++
Sbjct: 61 -----------------HGRSDPAGYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVAL 103
Query: 194 VFSMKYPHMVHKLVI---------WGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAY 244
++++P V LV+ + L A + +L A
Sbjct: 104 ALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAAL 163
Query: 245 DNDVNYITGIFNQYVDMVNL--------------------IFKSYGRNVYQELLPYVDVP 284
+ + + + L + VP
Sbjct: 164 GLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVP 223
Query: 285 VLVFHSADDVMVSTQQVQSLLNQLKF-CQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
L+ H DD +V + + L L + GH H++ + F F+
Sbjct: 224 TLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFL 279
|
Length = 282 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 6e-13
Identities = 40/191 (20%), Positives = 61/191 (31%), Gaps = 37/191 (19%)
Query: 144 GYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMV 203
G+G S +E+D LL LG+ V L G GG ++ + + P V
Sbjct: 34 GHGDS---DGPPRTPYSLEDDAADLAALLDALGLGPVVLVGHSLGGAVALAAAARRPERV 90
Query: 204 HKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVN 263
LV+ + L A +L+A
Sbjct: 91 AGLVLISP----------PLRDLEELLAADAAALLALLRAA------------------- 121
Query: 264 LIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSC 323
+E L + VPVLV H DD +V + + L L + GH
Sbjct: 122 -----LLDADLREALARLTVPVLVIHGEDDPLVPPEAARRLAEALPGAELVVLPGAGHLP 176
Query: 324 HIKHGQVFNEI 334
H++H + E
Sbjct: 177 HLEHPEEVAEA 187
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 9e-04
Identities = 39/216 (18%), Positives = 65/216 (30%), Gaps = 27/216 (12%)
Query: 144 GYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMV 203
G+G+S + F + ++ + LL LG+ KV+L G GG ++ ++ KYP V
Sbjct: 10 GFGRS-SPPKDFADY-RFDDLAEDLEALLDALGLDKVNLVGHSMGGLIALAYAAKYPDRV 67
Query: 204 HKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVN 263
LV+ GT + + G I V+
Sbjct: 68 KALVLVGTVHPAGLSSPLTPRGNLLGLLLDNFFNRLYDSVEALLGRAIKQFQALGRPFVS 127
Query: 264 LIFKSYGRNVYQ-------------------------ELLPYVDVPVLVFHSADDVMVST 298
K + + L +DVP L+ DD +V
Sbjct: 128 DFLKQFELSSLIRFGETLALDGLLGYALGYDLVWDRSAALKDIDVPTLIIWGDDDPLVPP 187
Query: 299 QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEI 334
+ L Q GH ++ E+
Sbjct: 188 DASEKLAALFPNAQLVVIDDAGHLAQLEKPDEVAEL 223
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|211851 TIGR03611, RutD, pyrimidine utilization protein D | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.003
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 284 PVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNE 333
PVL+ + DD++V L L Q GGH+ ++ + FN
Sbjct: 199 PVLLIAARDDMLVPYTCSLRLAAALPNAQLKLLPYGGHASNVTDPETFNR 248
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. Length = 248 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 345 | |||
| KOG2984|consensus | 277 | 100.0 | ||
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| KOG4178|consensus | 322 | 100.0 | ||
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| PLN02578 | 354 | hydrolase | 99.98 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.98 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.97 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.97 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.97 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.97 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.97 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.97 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.97 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.97 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.97 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.97 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.97 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.97 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.97 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.97 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.97 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.96 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.96 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.96 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.96 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.96 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.96 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.96 | |
| KOG4409|consensus | 365 | 99.96 | ||
| KOG1454|consensus | 326 | 99.95 | ||
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.95 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.95 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.95 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.95 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.94 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.94 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.94 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.93 | |
| PLN02511 | 388 | hydrolase | 99.93 | |
| KOG1455|consensus | 313 | 99.93 | ||
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.93 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.92 | |
| KOG2382|consensus | 315 | 99.92 | ||
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.92 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.91 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.91 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.89 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.88 | |
| PRK10566 | 249 | esterase; Provisional | 99.87 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.87 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.87 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.86 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.85 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.83 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.82 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.81 | |
| KOG1552|consensus | 258 | 99.8 | ||
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.79 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.78 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.77 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.76 | |
| KOG2564|consensus | 343 | 99.76 | ||
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.76 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.75 | |
| KOG4391|consensus | 300 | 99.75 | ||
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.75 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.74 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.73 | |
| KOG4667|consensus | 269 | 99.72 | ||
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.72 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.71 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.7 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.7 | |
| PLN00021 | 313 | chlorophyllase | 99.69 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.65 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.65 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.64 | |
| KOG1838|consensus | 409 | 99.64 | ||
| KOG2931|consensus | 326 | 99.63 | ||
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.62 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.62 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.61 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.6 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.58 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.57 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.55 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.53 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.53 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.52 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.52 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.52 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.47 | |
| PRK10115 | 686 | protease 2; Provisional | 99.46 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.46 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.46 | |
| KOG2624|consensus | 403 | 99.44 | ||
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.44 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.42 | |
| KOG2565|consensus | 469 | 99.41 | ||
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.41 | |
| KOG3043|consensus | 242 | 99.41 | ||
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.41 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.39 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.37 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.34 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.32 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.31 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.3 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.29 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.29 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.29 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.26 | |
| KOG2112|consensus | 206 | 99.22 | ||
| KOG2551|consensus | 230 | 99.21 | ||
| KOG2100|consensus | 755 | 99.2 | ||
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.2 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.19 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.15 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 99.15 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.14 | |
| KOG3975|consensus | 301 | 99.14 | ||
| KOG1515|consensus | 336 | 99.12 | ||
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.11 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.1 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.1 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 99.09 | |
| KOG2281|consensus | 867 | 99.07 | ||
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.05 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.04 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.04 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 99.02 | |
| KOG4627|consensus | 270 | 98.99 | ||
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.95 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.9 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.89 | |
| KOG1553|consensus | 517 | 98.81 | ||
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.76 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.76 | |
| KOG3847|consensus | 399 | 98.75 | ||
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.75 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.74 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.73 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.72 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.65 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.63 | |
| KOG3253|consensus | 784 | 98.6 | ||
| KOG4840|consensus | 299 | 98.6 | ||
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.59 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.58 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.49 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 98.46 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.42 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 98.39 | |
| KOG3101|consensus | 283 | 98.36 | ||
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.33 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.32 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.29 | |
| KOG1551|consensus | 371 | 98.29 | ||
| PLN02606 | 306 | palmitoyl-protein thioesterase | 98.26 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.24 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.17 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.15 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.02 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 98.02 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 98.0 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 97.95 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 97.95 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.91 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 97.88 | |
| PLN02209 | 437 | serine carboxypeptidase | 97.85 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.8 | |
| KOG3724|consensus | 973 | 97.78 | ||
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 97.69 | |
| KOG2541|consensus | 296 | 97.66 | ||
| KOG1282|consensus | 454 | 97.65 | ||
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 97.61 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.61 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 97.58 | |
| KOG3967|consensus | 297 | 97.54 | ||
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 97.51 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 97.49 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 97.48 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 97.44 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 97.34 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 97.33 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 97.24 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 97.19 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.13 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 97.12 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 97.09 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 96.99 | |
| KOG2183|consensus | 492 | 96.91 | ||
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 96.85 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 96.63 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.62 | |
| KOG2237|consensus | 712 | 96.5 | ||
| KOG1202|consensus | 2376 | 96.41 | ||
| KOG2369|consensus | 473 | 96.39 | ||
| KOG2521|consensus | 350 | 96.34 | ||
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 96.12 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 96.09 | |
| PLN02162 | 475 | triacylglycerol lipase | 95.81 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 95.78 | |
| PLN00413 | 479 | triacylglycerol lipase | 95.7 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 95.62 | |
| PLN02454 | 414 | triacylglycerol lipase | 95.31 | |
| KOG1516|consensus | 545 | 95.3 | ||
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 95.28 | |
| PLN02571 | 413 | triacylglycerol lipase | 95.18 | |
| KOG2182|consensus | 514 | 95.12 | ||
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 95.06 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 94.94 | |
| KOG4372|consensus | 405 | 94.91 | ||
| PLN02408 | 365 | phospholipase A1 | 94.88 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 94.86 | |
| PLN02934 | 515 | triacylglycerol lipase | 94.72 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 94.63 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 94.54 | |
| PLN02324 | 415 | triacylglycerol lipase | 94.29 | |
| PLN02310 | 405 | triacylglycerol lipase | 94.26 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 94.0 | |
| PLN02753 | 531 | triacylglycerol lipase | 93.72 | |
| PLN02802 | 509 | triacylglycerol lipase | 93.69 | |
| PLN02719 | 518 | triacylglycerol lipase | 93.34 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 93.15 | |
| PLN02761 | 527 | lipase class 3 family protein | 93.09 | |
| KOG2029|consensus | 697 | 92.71 | ||
| KOG4569|consensus | 336 | 91.87 | ||
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 91.72 | |
| PF09949 | 100 | DUF2183: Uncharacterized conserved protein (DUF218 | 91.07 | |
| PLN02847 | 633 | triacylglycerol lipase | 90.76 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 90.4 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 89.63 | |
| KOG4540|consensus | 425 | 89.63 | ||
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 87.91 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 84.81 | |
| COG1448 | 396 | TyrB Aspartate/tyrosine/aromatic aminotransferase | 83.59 | |
| KOG1283|consensus | 414 | 82.38 | ||
| KOG4388|consensus | 880 | 80.36 |
| >KOG2984|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=233.85 Aligned_cols=257 Identities=25% Similarity=0.527 Sum_probs=240.6
Q ss_pred CcceeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCC
Q psy4974 70 DVFTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQS 148 (345)
Q Consensus 70 ~~~~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s 148 (345)
...++..+.++|.+|.|...|.|+..|+++.|..|+.+..|.+.+..|.+. -++|+++|.|| +|.|
T Consensus 19 ~~~te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpG-------------YG~S 85 (277)
T KOG2984|consen 19 SDYTESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPG-------------YGTS 85 (277)
T ss_pred chhhhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCC-------------CCCC
Confidence 334477788999999999999998899999999999888999888777554 49999999999 9999
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHh
Q psy4974 149 LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRR 228 (345)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 228 (345)
.+|.+.+ ..+.+.+++++...+++++..+++.++|+|-||..|+..|+++++.|.++|++++....+......+..++.
T Consensus 86 rPP~Rkf-~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRd 164 (277)
T KOG2984|consen 86 RPPERKF-EVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRD 164 (277)
T ss_pred CCCcccc-hHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHH
Confidence 9999999 888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc
Q psy4974 229 LSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL 308 (345)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~ 308 (345)
...|.+..++.+...|+.+ .+...|..|.+.+.++....+...+...+++++||+|+++|..|++++....-.+....
T Consensus 165 v~kWs~r~R~P~e~~Yg~e--~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~ 242 (277)
T KOG2984|consen 165 VNKWSARGRQPYEDHYGPE--TFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK 242 (277)
T ss_pred HhhhhhhhcchHHHhcCHH--HHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhc
Confidence 9999999999999999999 99999999999999999888888889999999999999999999999988888888888
Q ss_pred CCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 309 KFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 309 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+.+++.+++.++|.+++..+++|+..+.+||+++
T Consensus 243 ~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 243 SLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred ccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999875
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=248.58 Aligned_cols=254 Identities=16% Similarity=0.184 Sum_probs=179.4
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
..+++++|..++|...|++.|+|||+||+++++ ..|..+++.|+++ |+|+++|+|| ||.|+.+..
T Consensus 10 ~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~-~~w~~~~~~L~~~-~~vi~~DlpG-------------~G~S~~~~~ 74 (294)
T PLN02824 10 TRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNA-DHWRKNTPVLAKS-HRVYAIDLLG-------------YGYSDKPNP 74 (294)
T ss_pred CceEEEcCeEEEEEEcCCCCCeEEEECCCCCCh-hHHHHHHHHHHhC-CeEEEEcCCC-------------CCCCCCCcc
Confidence 678889999999999986447999999999995 9999999999988 8999999999 999976531
Q ss_pred C-C--CCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCC------chhHHHHH
Q psy4974 154 S-F--VPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLT------IDNVRVFE 224 (345)
Q Consensus 154 ~-~--~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~------~~~~~~~~ 224 (345)
. . ....+++++++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++..... ........
T Consensus 75 ~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~ 154 (294)
T PLN02824 75 RSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIK 154 (294)
T ss_pred ccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHH
Confidence 1 0 0123788999999999999999999999999999999999999999999999999854211 00011111
Q ss_pred HhHhccCC------------C-hhhHHHHHHHcccCCchhhhhHHHH---------HHHHHHHHHhhCchhhhccCCCCC
Q psy4974 225 GMRRLSNW------------S-PMARSEVLKAYDNDVNYITGIFNQY---------VDMVNLIFKSYGRNVYQELLPYVD 282 (345)
Q Consensus 225 ~~~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~i~ 282 (345)
.+...... . ......+...+...........+.+ ...+..+............+.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 234 (294)
T PLN02824 155 AFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVK 234 (294)
T ss_pred HHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcC
Confidence 11110000 0 0001111111111100001111111 011111111111112234577899
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 283 VPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 283 ~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+|+|+|+|++|.++|.+.++.+.+..++.++++++++||++++|+|+++++.|.+||+++
T Consensus 235 ~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 235 CPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred CCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 999999999999999999999888888889999999999999999999999999999763
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=241.74 Aligned_cols=255 Identities=17% Similarity=0.183 Sum_probs=176.3
Q ss_pred CCcceeeeEEEcC-----ceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCcc
Q psy4974 69 QDVFTEGFFSIKG-----CDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTC 142 (345)
Q Consensus 69 ~~~~~~~~~~~~g-----~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~ 142 (345)
...+...++++++ .+++|...|++ .|+|||+||++++. ..|..+++.|++.||+|+++|+||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~-~~w~~~~~~L~~~gy~vi~~Dl~G----------- 83 (302)
T PRK00870 16 DYPFAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWS-YLYRKMIPILAAAGHRVIAPDLIG----------- 83 (302)
T ss_pred CCCCCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCch-hhHHHHHHHHHhCCCEEEEECCCC-----------
Confidence 3444578888888 89999998862 36999999999885 999999999987789999999999
Q ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch-hHH
Q psy4974 143 SGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID-NVR 221 (345)
Q Consensus 143 ~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~ 221 (345)
||.|+.+... ...+++++++++.+++++++.++++++||||||.+|+.+|.++|++|+++|++++....... ...
T Consensus 84 --~G~S~~~~~~--~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 159 (302)
T PRK00870 84 --FGRSDKPTRR--EDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPD 159 (302)
T ss_pred --CCCCCCCCCc--ccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchH
Confidence 9999765422 11267889999999999999999999999999999999999999999999999875322111 011
Q ss_pred HHHHhHhccCCChh--------------hHHHHHHHcccCCchhhhhHHHHHHHHHHHHH-------hhCchhhhccCCC
Q psy4974 222 VFEGMRRLSNWSPM--------------ARSEVLKAYDNDVNYITGIFNQYVDMVNLIFK-------SYGRNVYQELLPY 280 (345)
Q Consensus 222 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~ 280 (345)
.+..........+. ........+... +....+............ ..........+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (302)
T PRK00870 160 AFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAP--FPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLER 237 (302)
T ss_pred HHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcc--cCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhc
Confidence 11111110000000 000000111000 000000000000000000 0000112345678
Q ss_pred CCCCEEEEEeCCCCCCChHHHHHHHhhcCCcE---EEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 281 VDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQ---YYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 281 i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+++|+++|+|++|.++|... +.+.+.+++.+ +.+++++||++++|+|+++++.|.+||.++
T Consensus 238 i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 238 WDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred CCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 99999999999999999766 88888888776 889999999999999999999999999764
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-32 Score=236.03 Aligned_cols=249 Identities=19% Similarity=0.246 Sum_probs=175.2
Q ss_pred eeeEEEcCceEEEEEc--CCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKY--GSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~--g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
.++++++|.+++|... ++++++|||+||++++. ..|..+++.|.+. |+|+++|+|| ||.|+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~-~~w~~~~~~L~~~-~~vi~~Dl~G-------------~G~S~~~ 68 (276)
T TIGR02240 4 FRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANL-ELVFPFIEALDPD-LEVIAFDVPG-------------VGGSSTP 68 (276)
T ss_pred EEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcch-HHHHHHHHHhccC-ceEEEECCCC-------------CCCCCCC
Confidence 4567789999999775 34557999999999995 8999999999886 9999999999 9999866
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc--hhHHHHHHhHhc
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI--DNVRVFEGMRRL 229 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~ 229 (345)
...+ +++++++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++...... ............
T Consensus 69 ~~~~----~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 144 (276)
T TIGR02240 69 RHPY----RFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASP 144 (276)
T ss_pred CCcC----cHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCc
Confidence 5444 6788899999999999999999999999999999999999999999999998764211 111111000000
Q ss_pred cCC-Ch-hhHHHHHHHcccCCchhhhhHHHHHH---------HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCCh
Q psy4974 230 SNW-SP-MARSEVLKAYDNDVNYITGIFNQYVD---------MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST 298 (345)
Q Consensus 230 ~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~ 298 (345)
... .. .........+................ ......... .......+.++++|+|+|+|++|+++|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~v~~ 223 (276)
T TIGR02240 145 RRYIQPSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGL-GWTSIHWLHKIQQPTLVLAGDDDPIIPL 223 (276)
T ss_pred hhhhccccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHc-CCchhhHhhcCCCCEEEEEeCCCCcCCH
Confidence 000 00 00000000111000000000000000 000111111 1112345778999999999999999999
Q ss_pred HHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 299 QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+..+.+.+.++++++++++ +||+++.++|+++++.|.+|+++..
T Consensus 224 ~~~~~l~~~~~~~~~~~i~-~gH~~~~e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 224 INMRLLAWRIPNAELHIID-DGHLFLITRAEAVAPIIMKFLAEER 267 (276)
T ss_pred HHHHHHHHhCCCCEEEEEc-CCCchhhccHHHHHHHHHHHHHHhh
Confidence 9999999999999999997 5999999999999999999998754
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-32 Score=238.01 Aligned_cols=250 Identities=14% Similarity=0.143 Sum_probs=174.2
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
...++++|.+++|...|++ |+|||+||++++. ..|..+++.|+++ ++|+++|+|| ||.|+.+..
T Consensus 9 ~~~~~~~g~~i~y~~~G~g-~~vvllHG~~~~~-~~w~~~~~~L~~~-~~via~D~~G-------------~G~S~~~~~ 72 (295)
T PRK03592 9 MRRVEVLGSRMAYIETGEG-DPIVFLHGNPTSS-YLWRNIIPHLAGL-GRCLAPDLIG-------------MGASDKPDI 72 (295)
T ss_pred ceEEEECCEEEEEEEeCCC-CEEEEECCCCCCH-HHHHHHHHHHhhC-CEEEEEcCCC-------------CCCCCCCCC
Confidence 5667889999999999976 5999999999995 9999999999998 6999999999 999987765
Q ss_pred CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch------hHHHHHHhH
Q psy4974 154 SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID------NVRVFEGMR 227 (345)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~------~~~~~~~~~ 227 (345)
.+ ++.++++++.+++++++.++++++||||||.+|+.+|.++|++|+++|++++....... ....+..+.
T Consensus 73 ~~----~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (295)
T PRK03592 73 DY----TFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALR 148 (295)
T ss_pred CC----CHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHh
Confidence 55 67888999999999999999999999999999999999999999999999984332110 001111111
Q ss_pred hccCCChh---hHHHHHHHcccCC--chhhhhHHHHH---------HHHHHHHHhhC-----------chhhhccCCCCC
Q psy4974 228 RLSNWSPM---ARSEVLKAYDNDV--NYITGIFNQYV---------DMVNLIFKSYG-----------RNVYQELLPYVD 282 (345)
Q Consensus 228 ~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~~~~~-----------~~~~~~~l~~i~ 282 (345)
........ ........+.... .........+. .....++.... ..+....+.+++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 228 (295)
T PRK03592 149 SPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSD 228 (295)
T ss_pred CcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCC
Confidence 10000000 0000111111100 00000000000 00111111000 011234467889
Q ss_pred CCEEEEEeCCCCCCChHHHHHH-HhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 283 VPVLVFHSADDVMVSTQQVQSL-LNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 283 ~Pvl~i~G~~D~~v~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+|+|+|+|++|.++++....++ .+..+++++.+++++||+++.|+|+++++.|.+|+++..
T Consensus 229 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 229 VPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred CCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhc
Confidence 9999999999999954444444 555678999999999999999999999999999998764
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-31 Score=239.36 Aligned_cols=251 Identities=17% Similarity=0.190 Sum_probs=173.4
Q ss_pred eeeEEEcCc-eEEEEEcCCC-----CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCC
Q psy4974 74 EGFFSIKGC-DIRFIKYGSG-----AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQ 147 (345)
Q Consensus 74 ~~~~~~~g~-~l~~~~~g~~-----~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~ 147 (345)
..++..+|. +++|.+.|++ .|+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~-~~w~~~~~~L~~~-~~via~Dl~G-------------~G~ 127 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASI-PHWRRNIGVLAKN-YTVYAIDLLG-------------FGA 127 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCH-HHHHHHHHHHhcC-CEEEEECCCC-------------CCC
Confidence 466777787 9999998865 36999999999994 9999999999875 9999999999 999
Q ss_pred CCCCCC-CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHH-hCCcccceeeEeccCCCCCchh--HHHH
Q psy4974 148 SLPKGR-SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSM-KYPHMVHKLVIWGTKSFLTIDN--VRVF 223 (345)
Q Consensus 148 s~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~~--~~~~ 223 (345)
|+.+.. .| +++++++++.++++.++.++++|+||||||.+++.++. .+|++|+++|++++........ ....
T Consensus 128 S~~~~~~~~----~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~ 203 (360)
T PLN02679 128 SDKPPGFSY----TMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWR 203 (360)
T ss_pred CCCCCCccc----cHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHH
Confidence 976542 34 67888999999999999999999999999999999887 4799999999999865321110 0000
Q ss_pred -H-------HhHhccC---C----------ChhhHHHHHHHcccCCchhhhhHHHH---------HHHHHHHHHhhCchh
Q psy4974 224 -E-------GMRRLSN---W----------SPMARSEVLKAYDNDVNYITGIFNQY---------VDMVNLIFKSYGRNV 273 (345)
Q Consensus 224 -~-------~~~~~~~---~----------~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 273 (345)
. ....... . .......+...+.............+ ...+..........+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (360)
T PLN02679 204 IKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPN 283 (360)
T ss_pred HhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCC
Confidence 0 0000000 0 00011111111111100000011100 111111111111122
Q ss_pred hhccCCCCCCCEEEEEeCCCCCCChHH-----HHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 274 YQELLPYVDVPVLVFHSADDVMVSTQQ-----VQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 274 ~~~~l~~i~~Pvl~i~G~~D~~v~~~~-----~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
....+.++++|+|+|+|++|.++|... .+.+.+.++++++++++++||++++|+|+++++.|.+||++..
T Consensus 284 ~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 284 PIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred HHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 345577899999999999999998753 3456677899999999999999999999999999999998653
|
|
| >KOG4178|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=225.31 Aligned_cols=257 Identities=17% Similarity=0.164 Sum_probs=181.9
Q ss_pred CCcceeeeEEEcCceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCC
Q psy4974 69 QDVFTEGFFSIKGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQ 147 (345)
Q Consensus 69 ~~~~~~~~~~~~g~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~ 147 (345)
....+..+++.+|+.++|.+.|.+ .|.|+++||++.+ +.+|+.++..|+..||+|+++|+|| +|.
T Consensus 19 ~~~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~-wyswr~q~~~la~~~~rviA~DlrG-------------yG~ 84 (322)
T KOG4178|consen 19 LSAISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPES-WYSWRHQIPGLASRGYRVIAPDLRG-------------YGF 84 (322)
T ss_pred hhhcceeeEEEccEEEEEEeecCCCCCEEEEEccCCcc-chhhhhhhhhhhhcceEEEecCCCC-------------CCC
Confidence 344568889999999999998854 4899999999999 6999999999999999999999999 999
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHH-HHHh
Q psy4974 148 SLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRV-FEGM 226 (345)
Q Consensus 148 s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~ 226 (345)
|+.|... +..++..++.++..+++.++.++++++||+||+.+|..+|..+|++|+++|+++.....+...... ....
T Consensus 85 Sd~P~~~--~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~ 162 (322)
T KOG4178|consen 85 SDAPPHI--SEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAI 162 (322)
T ss_pred CCCCCCc--ceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccc
Confidence 9987653 223788999999999999999999999999999999999999999999999999866522111100 0000
Q ss_pred Hh----------ccC----CChhhHHHHHH-HcccCC--------------chh-hhh------------HHHHHHHHHH
Q psy4974 227 RR----------LSN----WSPMARSEVLK-AYDNDV--------------NYI-TGI------------FNQYVDMVNL 264 (345)
Q Consensus 227 ~~----------~~~----~~~~~~~~~~~-~~~~~~--------------~~~-~~~------------~~~~~~~~~~ 264 (345)
.. ... ......+.+.. .+.... .+. ... +...+...+.
T Consensus 163 f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn 242 (322)
T KOG4178|consen 163 FGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRN 242 (322)
T ss_pred cCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHH
Confidence 00 000 00000000111 110000 000 000 0011111112
Q ss_pred HHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH-HHHHHHhhcCCc-EEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 265 IFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ-QVQSLLNQLKFC-QYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 265 ~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~-~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+.+.+. .....+.++.+|+++|+|+.|.+.+.. ....+.+.+++. +.++++++||+++.|+|+++++++.+||++.
T Consensus 243 ~~r~w~--a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 243 FRRNWE--AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred HhhCch--hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 222211 224456788999999999999988755 555566666765 7889999999999999999999999999875
Q ss_pred c
Q psy4974 343 N 343 (345)
Q Consensus 343 ~ 343 (345)
.
T Consensus 321 ~ 321 (322)
T KOG4178|consen 321 S 321 (322)
T ss_pred c
Confidence 4
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-31 Score=226.20 Aligned_cols=233 Identities=18% Similarity=0.212 Sum_probs=160.8
Q ss_pred eEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchH
Q psy4974 83 DIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIE 162 (345)
Q Consensus 83 ~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~ 162 (345)
.++|...|+++|+|||+||++++. ..|..+++.|.+. |+|+++|+|| ||.|+.+. .+ +++
T Consensus 3 ~~~y~~~G~g~~~ivllHG~~~~~-~~w~~~~~~L~~~-~~vi~~Dl~G-------------~G~S~~~~-~~----~~~ 62 (256)
T PRK10349 3 NIWWQTKGQGNVHLVLLHGWGLNA-EVWRCIDEELSSH-FTLHLVDLPG-------------FGRSRGFG-AL----SLA 62 (256)
T ss_pred ccchhhcCCCCCeEEEECCCCCCh-hHHHHHHHHHhcC-CEEEEecCCC-------------CCCCCCCC-CC----CHH
Confidence 377888888877899999999995 9999999999887 9999999999 99997542 23 555
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch------hHHHHHHhHh-ccCCChh
Q psy4974 163 EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID------NVRVFEGMRR-LSNWSPM 235 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~------~~~~~~~~~~-~~~~~~~ 235 (345)
++++++. .+..++++++||||||.+|+.+|.++|++|+++|++++.+..... .......+.. +......
T Consensus 63 ~~~~~l~----~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (256)
T PRK10349 63 DMAEAVL----QQAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQR 138 (256)
T ss_pred HHHHHHH----hcCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHH
Confidence 6565554 346689999999999999999999999999999999885432110 0011111110 0000000
Q ss_pred hHHHHHHH--cccCCchhhhhHHHHHH-----------HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHH
Q psy4974 236 ARSEVLKA--YDNDVNYITGIFNQYVD-----------MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQ 302 (345)
Q Consensus 236 ~~~~~~~~--~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~ 302 (345)
....+... +... ........+.. .+..........+....+.++++|+|+++|++|.++|.+.++
T Consensus 139 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~ 216 (256)
T PRK10349 139 TVERFLALQTMGTE--TARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVP 216 (256)
T ss_pred HHHHHHHHHHccCc--hHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHH
Confidence 01111000 1111 00100000000 011111111222345667889999999999999999999999
Q ss_pred HHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 303 SLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
.+.+.++++++++++++||++++|+|++|++.+.+|-.+
T Consensus 217 ~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 217 MLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred HHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999998543
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.9e-30 Score=231.59 Aligned_cols=245 Identities=15% Similarity=0.223 Sum_probs=175.1
Q ss_pred eeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS 154 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~ 154 (345)
.++..+|..++|...|++ |+|||+||++++ ...|..+++.|++. |+|+++|+|| ||.|+.+...
T Consensus 69 ~~~~~~~~~i~Y~~~g~g-~~vvliHG~~~~-~~~w~~~~~~l~~~-~~v~~~D~~G-------------~G~S~~~~~~ 132 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGEG-LPIVLIHGFGAS-AFHWRYNIPELAKK-YKVYALDLLG-------------FGWSDKALIE 132 (354)
T ss_pred eEEEECCEEEEEEEcCCC-CeEEEECCCCCC-HHHHHHHHHHHhcC-CEEEEECCCC-------------CCCCCCcccc
Confidence 556778999999998876 589999999999 49999999999876 9999999999 9999877655
Q ss_pred CCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH----------HH--
Q psy4974 155 FVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV----------RV-- 222 (345)
Q Consensus 155 ~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~----------~~-- 222 (345)
| +...+++++.++++.+..++++++|||+||.+|+.+|.++|++|+++|++++......... ..
T Consensus 133 ~----~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (354)
T PLN02578 133 Y----DAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLT 208 (354)
T ss_pred c----CHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhh
Confidence 5 6677789999999999889999999999999999999999999999999987543221110 00
Q ss_pred ---HHHhHhc------------cCCChhhHHHHHHHcccCC---chhhhh----------HHHHHHHHHHHHHhhCchhh
Q psy4974 223 ---FEGMRRL------------SNWSPMARSEVLKAYDNDV---NYITGI----------FNQYVDMVNLIFKSYGRNVY 274 (345)
Q Consensus 223 ---~~~~~~~------------~~~~~~~~~~~~~~~~~~~---~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 274 (345)
....... ..............+.... .+.... ...+...+...+........
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (354)
T PLN02578 209 RFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTL 288 (354)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCH
Confidence 0000000 0000000011111111110 000000 00001111111111122334
Q ss_pred hccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 275 QELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 275 ~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.+.+.++++|+++|+|++|.++|.+.++.+.+.+++.+++++ ++||+++.|+|+++++.|.+|++
T Consensus 289 ~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 289 DSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred HHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 556788999999999999999999999999999999999999 59999999999999999999985
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.1e-30 Score=224.34 Aligned_cols=243 Identities=19% Similarity=0.236 Sum_probs=163.9
Q ss_pred CceEEEEEcCCCCceEEEEcCcCCCchhhHHH---HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 81 GCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKK---QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 81 g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
+..++|...|++ |+|||+||++++. ..|.. .+..|.+.||+|+++|+|| ||.|+.+.... .
T Consensus 19 ~~~~~y~~~g~~-~~ivllHG~~~~~-~~~~~~~~~~~~l~~~~~~vi~~D~~G-------------~G~S~~~~~~~-~ 82 (282)
T TIGR03343 19 NFRIHYNEAGNG-EAVIMLHGGGPGA-GGWSNYYRNIGPFVDAGYRVILKDSPG-------------FNKSDAVVMDE-Q 82 (282)
T ss_pred ceeEEEEecCCC-CeEEEECCCCCch-hhHHHHHHHHHHHHhCCCEEEEECCCC-------------CCCCCCCcCcc-c
Confidence 577999998866 5899999998874 66654 3455666689999999999 99997653221 1
Q ss_pred ccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc----hhHHHHHHhHhc-cCC
Q psy4974 158 FQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI----DNVRVFEGMRRL-SNW 232 (345)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~----~~~~~~~~~~~~-~~~ 232 (345)
.....++++.++++.++.++++++||||||.+++.+|.++|++++++|++++...... ............ ...
T Consensus 83 --~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (282)
T TIGR03343 83 --RGLVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEP 160 (282)
T ss_pred --ccchhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCC
Confidence 1124578899999999999999999999999999999999999999999997532111 000111111110 011
Q ss_pred ChhhHHHHHHHcccCCchhhh-----hHHHH---HHHHHHHHHh-----hCchhhhccCCCCCCCEEEEEeCCCCCCChH
Q psy4974 233 SPMARSEVLKAYDNDVNYITG-----IFNQY---VDMVNLIFKS-----YGRNVYQELLPYVDVPVLVFHSADDVMVSTQ 299 (345)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~-----~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~ 299 (345)
...........+......... .+... .......... ....+....+.++++|+|+++|++|.+++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~ 240 (282)
T TIGR03343 161 SYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLD 240 (282)
T ss_pred CHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCch
Confidence 011111111111000000010 00000 0011111110 1112234457789999999999999999999
Q ss_pred HHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 300 QVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
.++++++.+|++++++++++||+++.|+|+++++.|.+||++
T Consensus 241 ~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 241 HGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred hHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999963
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=223.76 Aligned_cols=248 Identities=13% Similarity=0.160 Sum_probs=175.0
Q ss_pred eeeEEEcCceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
..++++++..++|.+.|+. .|+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+.+.
T Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~-~~~~~~~~~l~~~-~~vi~~D~~G-------------~G~S~~~~ 72 (278)
T TIGR03056 8 SRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGAST-HSWRDLMPPLARS-FRVVAPDLPG-------------HGFTRAPF 72 (278)
T ss_pred cceeeECCEEEEEEecCCCCCCeEEEEcCCCCCH-HHHHHHHHHHhhC-cEEEeecCCC-------------CCCCCCcc
Confidence 5778899999999998863 47999999999995 9999999999875 9999999999 99997655
Q ss_pred C-CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH----HHHHHhH
Q psy4974 153 R-SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV----RVFEGMR 227 (345)
Q Consensus 153 ~-~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~----~~~~~~~ 227 (345)
. .+ +++.+++++.+++++++.++++|+||||||.+++.+|.++|++++++|++++......... .......
T Consensus 73 ~~~~----~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 148 (278)
T TIGR03056 73 RFRF----TLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVL 148 (278)
T ss_pred ccCC----CHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhh
Confidence 4 33 7888899999999999989999999999999999999999999999999987543211000 0000000
Q ss_pred hccCCChhh-------HHHHHHHcccCCchhhh-hHHHH---------HHHHHHHHHhhCchhhhccCCCCCCCEEEEEe
Q psy4974 228 RLSNWSPMA-------RSEVLKAYDNDVNYITG-IFNQY---------VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHS 290 (345)
Q Consensus 228 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G 290 (345)
......... .......+......... ....+ ...................++++++|+++++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g 228 (278)
T TIGR03056 149 ACNPFTPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAG 228 (278)
T ss_pred hhcccchHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEe
Confidence 000000000 00000000000000000 00000 00011111111111223456788999999999
Q ss_pred CCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 291 ADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 291 ~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
++|.++|.+..+.+.+.+++++++.++++||+++.++|+++++.|.+|++
T Consensus 229 ~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 229 EEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred CCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-30 Score=230.81 Aligned_cols=254 Identities=17% Similarity=0.246 Sum_probs=169.3
Q ss_pred EEEcCceEEEEEcCCC--------CceEEEEcCcCCCchhhHH--HHHHhh-------CCCCeEEEEeCCCCchhhhccC
Q psy4974 77 FSIKGCDIRFIKYGSG--------AQVLFFTYGVLGEIRNSFK--KQLTAF-------DPKLFTSIFWDPPGNVVLYLLG 139 (345)
Q Consensus 77 ~~~~g~~l~~~~~g~~--------~p~vv~lHG~~~~~~~~~~--~~~~~L-------~~~G~~vi~~D~~G~~~~~~~g 139 (345)
...+|.+++|...|++ .|+|||+||++++. ..|. .+.+.| ..++|+|+++|+||
T Consensus 45 ~~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~-~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~G-------- 115 (360)
T PRK06489 45 ETLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSG-KSFLSPTFAGELFGPGQPLDASKYFIILPDGIG-------- 115 (360)
T ss_pred CCcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCch-hhhccchhHHHhcCCCCcccccCCEEEEeCCCC--------
Confidence 3568999999999874 47999999999984 6775 454444 13459999999999
Q ss_pred CccCCCCCCCCCCCCCC---CccchHHHHHHHHHH-HHHhCCccEE-EEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 140 KTCSGYGQSLPKGRSFV---PFQYIEEDVDIAYEL-LKLLGVCKVS-LFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 140 ~~~~~~G~s~~~~~~~~---~~~~~~~~~~~~~~~-l~~~~~~~i~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
||.|+.+...+. ...++++.++++.++ ++++++++++ |+||||||.+|+.+|.++|++|+++|++++.+.
T Consensus 116 -----hG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~ 190 (360)
T PRK06489 116 -----HGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPT 190 (360)
T ss_pred -----CCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcc
Confidence 999976543200 122677888888875 4889999985 899999999999999999999999999988643
Q ss_pred CCchhHH-H----HHHhHhccCC-----C--hhhHHHHHHHc--------------ccCCchhhhhHHHHHH--------
Q psy4974 215 LTIDNVR-V----FEGMRRLSNW-----S--PMARSEVLKAY--------------DNDVNYITGIFNQYVD-------- 260 (345)
Q Consensus 215 ~~~~~~~-~----~~~~~~~~~~-----~--~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~-------- 260 (345)
....... . .........+ . ..........+ ..........++....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (360)
T PRK06489 191 EMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADAN 270 (360)
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHH
Confidence 2111111 0 1111111100 0 00000000000 0000000111111110
Q ss_pred HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHH--HHHHhhcCCcEEEEeCCC----CCcccccChHHHHHH
Q psy4974 261 MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQV--QSLLNQLKFCQYYQFSSG----GHSCHIKHGQVFNEI 334 (345)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~--~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~ 334 (345)
.+...+......+....+.+|++|+|+|+|++|.++|.+.+ +.+++.+|++++++++++ ||.++ ++|+++++.
T Consensus 271 ~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~ 349 (360)
T PRK06489 271 DFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAY 349 (360)
T ss_pred HHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHH
Confidence 11111111122334566788999999999999999998865 788999999999999986 99997 899999999
Q ss_pred HHHHHHhhccC
Q psy4974 335 SRNFILEENKT 345 (345)
Q Consensus 335 i~~fl~~~~k~ 345 (345)
|.+||++..|.
T Consensus 350 i~~FL~~~~~~ 360 (360)
T PRK06489 350 LAEFLAQVPKR 360 (360)
T ss_pred HHHHHHhcccC
Confidence 99999988763
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-30 Score=222.51 Aligned_cols=249 Identities=15% Similarity=0.149 Sum_probs=169.3
Q ss_pred cceeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 71 VFTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 71 ~~~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
.++..+++++|.+++|...|++ |+|||+||++.+. ..|..+++.|.+. |+|+++|+|| ||.|+.
T Consensus 13 ~~~~~~~~~~~~~i~y~~~G~~-~~iv~lHG~~~~~-~~~~~~~~~l~~~-~~vi~~D~~G-------------~G~S~~ 76 (286)
T PRK03204 13 PFESRWFDSSRGRIHYIDEGTG-PPILLCHGNPTWS-FLYRDIIVALRDR-FRCVAPDYLG-------------FGLSER 76 (286)
T ss_pred cccceEEEcCCcEEEEEECCCC-CEEEEECCCCccH-HHHHHHHHHHhCC-cEEEEECCCC-------------CCCCCC
Confidence 3557888999999999999876 6999999999884 8999999999876 9999999999 999976
Q ss_pred CCC-CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch-hHHHHHHhHh
Q psy4974 151 KGR-SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID-NVRVFEGMRR 228 (345)
Q Consensus 151 ~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~ 228 (345)
+.. .+ ++++.++++.+++++++.++++++||||||.+++.+|..+|++|+++|++++....... ....+.....
T Consensus 77 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 152 (286)
T PRK03204 77 PSGFGY----QIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMS 152 (286)
T ss_pred CCcccc----CHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhc
Confidence 542 33 67888999999999999999999999999999999999999999999998875432211 1111111000
Q ss_pred ccCCChh-h-HHHH-HHHcccCC--chhhhhHHH---------HHHHHHHHHHhhC--c---hhhhccCC--CCCCCEEE
Q psy4974 229 LSNWSPM-A-RSEV-LKAYDNDV--NYITGIFNQ---------YVDMVNLIFKSYG--R---NVYQELLP--YVDVPVLV 287 (345)
Q Consensus 229 ~~~~~~~-~-~~~~-~~~~~~~~--~~~~~~~~~---------~~~~~~~~~~~~~--~---~~~~~~l~--~i~~Pvl~ 287 (345)
....... . .... ...+.... ......... ....+........ . ......+. .+++|+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ptli 232 (286)
T PRK03204 153 SPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLL 232 (286)
T ss_pred cccchhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEE
Confidence 0000000 0 0000 11110000 000000000 0001100000000 0 00011111 12899999
Q ss_pred EEeCCCCCCCh-HHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHH
Q psy4974 288 FHSADDVMVST-QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 288 i~G~~D~~v~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
|+|++|.++++ ...+.+.+.+|+.++++++++||++++|+|+++++.|.+||
T Consensus 233 I~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 233 VWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred EecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 99999998854 46788999999999999999999999999999999999997
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-30 Score=221.73 Aligned_cols=229 Identities=17% Similarity=0.162 Sum_probs=158.5
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC-CCCCccchHHHHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR-SFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~-~~~~~~~~~~~~~~~~~~l~ 173 (345)
+|||+||++.+. ..|..+++.|.+.||+|+++|+|| ||.|+.+.. .+ +++++++++.++++
T Consensus 5 ~vvllHG~~~~~-~~w~~~~~~L~~~~~~via~Dl~G-------------~G~S~~~~~~~~----~~~~~a~dl~~~l~ 66 (255)
T PLN02965 5 HFVFVHGASHGA-WCWYKLATLLDAAGFKSTCVDLTG-------------AGISLTDSNTVS----SSDQYNRPLFALLS 66 (255)
T ss_pred EEEEECCCCCCc-CcHHHHHHHHhhCCceEEEecCCc-------------CCCCCCCccccC----CHHHHHHHHHHHHH
Confidence 699999999985 999999999977789999999999 999975432 33 67888999999999
Q ss_pred HhCC-ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch--hHHH---HHHhHhccCC-------Ch----hh
Q psy4974 174 LLGV-CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID--NVRV---FEGMRRLSNW-------SP----MA 236 (345)
Q Consensus 174 ~~~~-~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~---~~~~~~~~~~-------~~----~~ 236 (345)
.++. ++++++||||||.+++.+|.++|++|+++|++++....... .... .......... .. ..
T Consensus 67 ~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (255)
T PLN02965 67 DLPPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMM 146 (255)
T ss_pred hcCCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhc
Confidence 9987 49999999999999999999999999999999986321110 0110 0000000000 00 00
Q ss_pred HH-HHHHHcccCCchhhhhHHHHHHHHHH-HHHhh-CchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEE
Q psy4974 237 RS-EVLKAYDNDVNYITGIFNQYVDMVNL-IFKSY-GRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQY 313 (345)
Q Consensus 237 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~ 313 (345)
.. .....+.... .. .........+.. ..... ...+....+..+++|+++|+|++|.++|+...+.+.+.++++++
T Consensus 147 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~ 224 (255)
T PLN02965 147 KPEFVRHYYYNQS-PL-EDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQT 224 (255)
T ss_pred CHHHHHHHHhcCC-CH-HHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceE
Confidence 00 1101110110 00 000000000000 00000 00011224456899999999999999999999999999999999
Q ss_pred EEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 314 YQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 314 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
++++++||++++|+|+++++.|.+|++...
T Consensus 225 ~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 225 YVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred EEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998654
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=230.00 Aligned_cols=252 Identities=11% Similarity=0.169 Sum_probs=170.6
Q ss_pred eeeeEEEcCceEEEEEcCCC----CceEEEEcCcCCCchhhHHH-HHHhhC---CCCeEEEEeCCCCchhhhccCCccCC
Q psy4974 73 TEGFFSIKGCDIRFIKYGSG----AQVLFFTYGVLGEIRNSFKK-QLTAFD---PKLFTSIFWDPPGNVVLYLLGKTCSG 144 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~g~~----~p~vv~lHG~~~~~~~~~~~-~~~~L~---~~G~~vi~~D~~G~~~~~~~g~~~~~ 144 (345)
...+...++..++|...++. +|+|||+||++++. ..|.. +++.|. +.+|+|+++|+||
T Consensus 177 ~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl~G------------- 242 (481)
T PLN03087 177 CTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDLLG------------- 242 (481)
T ss_pred eeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECCCC-------------
Confidence 35677788899999998753 36999999999995 88975 445555 3579999999999
Q ss_pred CCCCCCCCC-CCCCccchHHHHHHHH-HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHH
Q psy4974 145 YGQSLPKGR-SFVPFQYIEEDVDIAY-ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRV 222 (345)
Q Consensus 145 ~G~s~~~~~-~~~~~~~~~~~~~~~~-~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 222 (345)
||.|+.+.. .| +++++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++..........
T Consensus 243 ~G~S~~p~~~~y----tl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~ 318 (481)
T PLN03087 243 FGRSPKPADSLY----TLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQA 318 (481)
T ss_pred CCCCcCCCCCcC----CHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhH
Confidence 999976532 23 6788888884 78999999999999999999999999999999999999999865433221111
Q ss_pred ----HHHhHhccCCCh-----hhHHHH---HHHc----ccCCchhhh---h-----HHH-HHH------------HHHHH
Q psy4974 223 ----FEGMRRLSNWSP-----MARSEV---LKAY----DNDVNYITG---I-----FNQ-YVD------------MVNLI 265 (345)
Q Consensus 223 ----~~~~~~~~~~~~-----~~~~~~---~~~~----~~~~~~~~~---~-----~~~-~~~------------~~~~~ 265 (345)
.........+.. ...... .... ......... . ... ... .+...
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~ 398 (481)
T PLN03087 319 TQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNI 398 (481)
T ss_pred HHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHH
Confidence 111000011110 000000 0000 000000000 0 000 000 00000
Q ss_pred HHhh---CchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccc-cChHHHHHHHHHHHHh
Q psy4974 266 FKSY---GRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHI-KHGQVFNEISRNFILE 341 (345)
Q Consensus 266 ~~~~---~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 341 (345)
.... ........+.++++|+|+|+|++|.++|++..+.+++.+|++++++++++||++++ ++|+++++.|.+|.+.
T Consensus 399 i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 399 ICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 0000 00011122336899999999999999999999999999999999999999999886 9999999999999865
Q ss_pred h
Q psy4974 342 E 342 (345)
Q Consensus 342 ~ 342 (345)
.
T Consensus 479 ~ 479 (481)
T PLN03087 479 S 479 (481)
T ss_pred c
Confidence 3
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-29 Score=224.51 Aligned_cols=244 Identities=13% Similarity=0.128 Sum_probs=167.6
Q ss_pred EEEcCceEEEEEcCC----CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 77 FSIKGCDIRFIKYGS----GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 77 ~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
++.+|.+++|..+++ .+++|||+||++++....|..+++.|+++||+|+++|+|| ||.|+.+.
T Consensus 67 ~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G-------------~G~S~~~~ 133 (349)
T PLN02385 67 VNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPG-------------FGLSEGLH 133 (349)
T ss_pred EcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCC-------------CCCCCCCC
Confidence 345899999998763 3468999999988852457889999998899999999999 99997543
Q ss_pred CCCCCccchHHHHHHHHHHHHHhCCc------cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch-----h-H
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLLGVC------KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID-----N-V 220 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~~~------~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-----~-~ 220 (345)
. ...+++++++++.++++.+..+ +++|+||||||.+|+.++.++|++++++|+++|....... . .
T Consensus 134 ~---~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~ 210 (349)
T PLN02385 134 G---YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVL 210 (349)
T ss_pred C---CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHH
Confidence 2 2236778899999888876532 7999999999999999999999999999999986542211 0 0
Q ss_pred HHHHHhHhc-cCC---Ch----------hhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEE
Q psy4974 221 RVFEGMRRL-SNW---SP----------MARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVL 286 (345)
Q Consensus 221 ~~~~~~~~~-~~~---~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 286 (345)
.....+... ..+ .. ........ +... ..... .........+.. ..+....+.++++|+|
T Consensus 211 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~--~~~~~~~~~l~~--~~~~~~~l~~i~~P~L 283 (349)
T PLN02385 211 QILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAE-YNVI--AYKDK--PRLRTAVELLRT--TQEIEMQLEEVSLPLL 283 (349)
T ss_pred HHHHHHHHHCCCceecCCCccccccccCHHHHHHhh-cCcc--eeCCC--cchHHHHHHHHH--HHHHHHhcccCCCCEE
Confidence 111111110 000 00 00000000 0000 00000 000011111111 1123455778999999
Q ss_pred EEEeCCCCCCChHHHHHHHhhc--CCcEEEEeCCCCCcccccChHH----HHHHHHHHHHhhc
Q psy4974 287 VFHSADDVMVSTQQVQSLLNQL--KFCQYYQFSSGGHSCHIKHGQV----FNEISRNFILEEN 343 (345)
Q Consensus 287 ~i~G~~D~~v~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~~~~ 343 (345)
+|+|++|.++|.+.++.+.+.+ ++.++++++++||+++.++|++ +.+.|.+||+++.
T Consensus 284 ii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 284 ILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred EEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 9999999999999999999887 4689999999999999999886 8888999998764
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-29 Score=214.48 Aligned_cols=226 Identities=15% Similarity=0.183 Sum_probs=159.3
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
++|+|||+||++++. ..|..++..|++. |+|+++|+|| ||.|..+. .+ +++++++++.++
T Consensus 15 ~~~~iv~lhG~~~~~-~~~~~~~~~l~~~-~~vi~~D~~G-------------~G~s~~~~-~~----~~~~~~~d~~~~ 74 (255)
T PRK10673 15 NNSPIVLVHGLFGSL-DNLGVLARDLVND-HDIIQVDMRN-------------HGLSPRDP-VM----NYPAMAQDLLDT 74 (255)
T ss_pred CCCCEEEECCCCCch-hHHHHHHHHHhhC-CeEEEECCCC-------------CCCCCCCC-CC----CHHHHHHHHHHH
Confidence 347999999999995 8999999999876 9999999999 99997543 34 678889999999
Q ss_pred HHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc--hhHHHHHHhHhccCCChh----hHHHHHHHcc
Q psy4974 172 LKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI--DNVRVFEGMRRLSNWSPM----ARSEVLKAYD 245 (345)
Q Consensus 172 l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 245 (345)
++.++.++++++||||||.+|+.+|.++|++|+++|++++.+.... .....+..+......... ....+...+.
T Consensus 75 l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
T PRK10673 75 LDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLN 154 (255)
T ss_pred HHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999976443211 111111111111000000 0000111110
Q ss_pred cCCchhh--------hhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeC
Q psy4974 246 NDVNYIT--------GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFS 317 (345)
Q Consensus 246 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~ 317 (345)
.. .... ..+..........+.. ......++.+++|+|+|+|++|..++.+..+.+.+.++++++.+++
T Consensus 155 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~ 230 (255)
T PRK10673 155 EE-GVIQFLLKSFVDGEWRFNVPVLWDQYPH---IVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIA 230 (255)
T ss_pred CH-HHHHHHHhcCCcceeEeeHHHHHHhHHH---HhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeC
Confidence 00 0000 0000000000011111 1112346678999999999999999999999999999999999999
Q ss_pred CCCCcccccChHHHHHHHHHHHHh
Q psy4974 318 SGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 318 ~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
++||++++++|+++++.|.+||.+
T Consensus 231 ~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 231 GAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCeeeccCHHHHHHHHHHHHhc
Confidence 999999999999999999999975
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-29 Score=212.89 Aligned_cols=237 Identities=18% Similarity=0.253 Sum_probs=166.3
Q ss_pred EEEEEcCC--CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccch
Q psy4974 84 IRFIKYGS--GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYI 161 (345)
Q Consensus 84 l~~~~~g~--~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~ 161 (345)
++|...|+ ++|+||++||++++. ..|..+++.|.. ||+|+++|+|| ||.|+.+...+ ++
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~-~~~~~~~~~l~~-~~~v~~~d~~G-------------~G~s~~~~~~~----~~ 62 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDL-RMWDPVLPALTP-DFRVLRYDKRG-------------HGLSDAPEGPY----SI 62 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccch-hhHHHHHHHhhc-ccEEEEecCCC-------------CCCCCCCCCCC----CH
Confidence 56776765 457899999999884 999999999975 69999999999 99997655444 67
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCC-Chhh-HHH
Q psy4974 162 EEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNW-SPMA-RSE 239 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~ 239 (345)
++.++++.++++.++.++++++|||+||.+++.+|.++|++++++|++++......... ........... .... ...
T Consensus 63 ~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 141 (251)
T TIGR02427 63 EDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPES-WNARIAAVRAEGLAALADAV 141 (251)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhh-HHHHHhhhhhccHHHHHHHH
Confidence 88899999999999989999999999999999999999999999999987654322111 11110000000 0000 001
Q ss_pred HHHHcccCC----chhhhhHHHH-----HHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC
Q psy4974 240 VLKAYDNDV----NYITGIFNQY-----VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF 310 (345)
Q Consensus 240 ~~~~~~~~~----~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~ 310 (345)
+..++.... ......+... ...+..........+....+.++++|+++++|++|.++|.+..+.+.+.+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~ 221 (251)
T TIGR02427 142 LERWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPG 221 (251)
T ss_pred HHHHcccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCC
Confidence 111111110 0000000000 0011111112222233455678899999999999999999999999999999
Q ss_pred cEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 311 CQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 311 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.++++++++||++++++|+++.+.+.+||+
T Consensus 222 ~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 222 ARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred ceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 999999999999999999999999999984
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-29 Score=213.38 Aligned_cols=237 Identities=21% Similarity=0.267 Sum_probs=165.1
Q ss_pred EEEEEcCC---CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccc
Q psy4974 84 IRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY 160 (345)
Q Consensus 84 l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~ 160 (345)
++|...|+ +.|+||++||++++. ..|..+++.|.+. |+|+++|+|| ||.|..+.. ...+
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~-~~~~~~~~~l~~~-~~vi~~D~~G-------------~G~S~~~~~---~~~~ 62 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSG-SYWAPQLDVLTQR-FHVVTYDHRG-------------TGRSPGELP---PGYS 62 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcch-hHHHHHHHHHHhc-cEEEEEcCCC-------------CCCCCCCCc---ccCC
Confidence 35666663 457999999999995 9999999888765 9999999999 999975432 2226
Q ss_pred hHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh-HhccCCC-hhhHH
Q psy4974 161 IEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM-RRLSNWS-PMARS 238 (345)
Q Consensus 161 ~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~ 238 (345)
+++.++++.++++.++.++++++||||||.+|+.+|.++|++|+++|++++...........+... ....... .....
T Consensus 63 ~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (257)
T TIGR03611 63 IAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVH 142 (257)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhh
Confidence 788899999999999999999999999999999999999999999999998655432221111100 0000000 00000
Q ss_pred HHHH-HcccCCchhhhh----HHH---------HHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHH
Q psy4974 239 EVLK-AYDNDVNYITGI----FNQ---------YVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSL 304 (345)
Q Consensus 239 ~~~~-~~~~~~~~~~~~----~~~---------~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~ 304 (345)
.... .+... +.... ... ...............+....+.++++|+++++|++|.++|.+.++.+
T Consensus 143 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 220 (257)
T TIGR03611 143 AQALFLYPAD--WISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRL 220 (257)
T ss_pred hhhhhhcccc--HhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHH
Confidence 0000 00000 00000 000 00001111111112233456778899999999999999999999999
Q ss_pred HhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 305 LNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 305 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.+.+++.+++.++++||++++++|+++++.|.+||+
T Consensus 221 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 221 AAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred HHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999996
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-29 Score=220.78 Aligned_cols=250 Identities=12% Similarity=0.143 Sum_probs=170.0
Q ss_pred eeeEEEcCceEEEEEcCC--CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS--GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~--~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
..++..+|.+++|..++. ++++||++||++++. ..|..++..|.+.||+|+++|+|| ||.|+.+
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~-~~y~~~~~~l~~~g~~v~~~D~~G-------------~G~S~~~ 98 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESY-VKYAELAYDLFHLGYDVLIIDHRG-------------QGRSGRL 98 (330)
T ss_pred eEEEcCCCCEEEEEEccCCCCCcEEEEECCccchH-HHHHHHHHHHHHCCCeEEEEcCCC-------------CCCCCCC
Confidence 556667999999999863 446899999998884 889999988988899999999999 9999754
Q ss_pred CCCC--CCccchHHHHHHHHHHHHHh----CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH-----
Q psy4974 152 GRSF--VPFQYIEEDVDIAYELLKLL----GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV----- 220 (345)
Q Consensus 152 ~~~~--~~~~~~~~~~~~~~~~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~----- 220 (345)
.... ....+++++++++.++++.+ +..+++++||||||.+++.+|.++|+.++++|+++|.........
T Consensus 99 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~ 178 (330)
T PRK10749 99 LDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMAR 178 (330)
T ss_pred CCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHH
Confidence 2210 01236788899999988876 567999999999999999999999999999999998654221110
Q ss_pred HHHHHhHhc-----------cCCC------------hhhHHHHHHHcccCCch-h-hhhHHHHHHHHHHHHHhhCchhhh
Q psy4974 221 RVFEGMRRL-----------SNWS------------PMARSEVLKAYDNDVNY-I-TGIFNQYVDMVNLIFKSYGRNVYQ 275 (345)
Q Consensus 221 ~~~~~~~~~-----------~~~~------------~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 275 (345)
......... ..+. ........+.+...+.. . ..... +....... .....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~ 252 (330)
T PRK10749 179 RILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYH-WVRESILA-----GEQVL 252 (330)
T ss_pred HHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHH-HHHHHHHH-----HHHHH
Confidence 001111000 0000 00000111111111000 0 00011 11110000 01123
Q ss_pred ccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc-------CCcEEEEeCCCCCcccccCh---HHHHHHHHHHHHhhc
Q psy4974 276 ELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL-------KFCQYYQFSSGGHSCHIKHG---QVFNEISRNFILEEN 343 (345)
Q Consensus 276 ~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~~ 343 (345)
..+.++++|+|+|+|++|.+++++.++.+++.+ +++++++++++||.++.|.+ +.+.+.|.+||++++
T Consensus 253 ~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~~ 330 (330)
T PRK10749 253 AGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRHN 330 (330)
T ss_pred hhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhcC
Confidence 456788999999999999999999888888765 34589999999999998765 678899999998763
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-28 Score=213.07 Aligned_cols=247 Identities=13% Similarity=0.166 Sum_probs=167.5
Q ss_pred eeEEEcCceEEEEEcCCC---CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGSG---AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~~---~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
.++..+|..++|..+.++ ++.|+++||+++++ ..|..+++.|++.||+|+++|+|| ||.|+..
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~-~~~~~~~~~l~~~g~~via~D~~G-------------~G~S~~~ 69 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHS-GRYEELAENISSLGILVFSHDHIG-------------HGRSNGE 69 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCcccc-chHHHHHHHHHhCCCEEEEccCCC-------------CCCCCCc
Confidence 455669999999876542 34666779999985 999999999999899999999999 9999653
Q ss_pred CCCCCCccchHHHHHHHHHHHHHh----CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh-HHH-HHH
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLL----GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN-VRV-FEG 225 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~-~~~ 225 (345)
. + ....+.+.++++.+.++.+ ...+++++||||||.+|+.+|.++|++++++|+++|........ ... ...
T Consensus 70 ~--~-~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~ 146 (276)
T PHA02857 70 K--M-MIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAK 146 (276)
T ss_pred c--C-CcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHH
Confidence 2 2 4456667777777776654 34589999999999999999999999999999999865422110 000 000
Q ss_pred hHhc--cC-----CChhh----HHHHHHHcccCCchh-hhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCC
Q psy4974 226 MRRL--SN-----WSPMA----RSEVLKAYDNDVNYI-TGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADD 293 (345)
Q Consensus 226 ~~~~--~~-----~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D 293 (345)
.... .. +.... ...... +..+.... ......+....... .......+.++++|+|+++|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~i~~Pvliv~G~~D 220 (276)
T PHA02857 147 LMGIFYPNKIVGKLCPESVSRDMDEVYK-YQYDPLVNHEKIKAGFASQVLKA-----TNKVRKIIPKIKTPILILQGTNN 220 (276)
T ss_pred HHHHhCCCCccCCCCHhhccCCHHHHHH-HhcCCCccCCCccHHHHHHHHHH-----HHHHHHhcccCCCCEEEEecCCC
Confidence 0000 00 00000 000000 00000000 00011111111111 11224567789999999999999
Q ss_pred CCCChHHHHHHHhhc-CCcEEEEeCCCCCcccccCh---HHHHHHHHHHHHhhcc
Q psy4974 294 VMVSTQQVQSLLNQL-KFCQYYQFSSGGHSCHIKHG---QVFNEISRNFILEENK 344 (345)
Q Consensus 294 ~~v~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~~k 344 (345)
.++|++.++.+.+.+ +++++.+++++||.++.|.+ +++.+.+.+||+.+.|
T Consensus 221 ~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~~ 275 (276)
T PHA02857 221 EISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRVK 275 (276)
T ss_pred CcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhcc
Confidence 999999999998887 46899999999999998865 5788999999988654
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-29 Score=222.81 Aligned_cols=253 Identities=17% Similarity=0.208 Sum_probs=168.0
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchh-----------hHHHHHH---hhCCCCeEEEEeCCCCchhhhccC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRN-----------SFKKQLT---AFDPKLFTSIFWDPPGNVVLYLLG 139 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~-----------~~~~~~~---~L~~~G~~vi~~D~~G~~~~~~~g 139 (345)
..+...+|..++|...|++.+++||+||++++... .|..++. .|...+|+|+++|+||
T Consensus 38 ~~~~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G-------- 109 (343)
T PRK08775 38 MRHAGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIG-------- 109 (343)
T ss_pred ecCCCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCC--------
Confidence 44556689999999999633467888777776422 6888886 5743359999999999
Q ss_pred CccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccE-EEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch
Q psy4974 140 KTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKV-SLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID 218 (345)
Q Consensus 140 ~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 218 (345)
||.|. ...+ ++.++++++.++++.++++++ +++||||||++|+.+|.++|++|+++|++++.......
T Consensus 110 -----~g~s~--~~~~----~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~ 178 (343)
T PRK08775 110 -----ADGSL--DVPI----DTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPY 178 (343)
T ss_pred -----CCCCC--CCCC----CHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHH
Confidence 99874 2234 567889999999999999775 79999999999999999999999999999986543221
Q ss_pred hHHHHH---HhHhccCC---C-h--hh-----------HHHHHHHcccCCch----hhhhHHHHHHHHH-H---------
Q psy4974 219 NVRVFE---GMRRLSNW---S-P--MA-----------RSEVLKAYDNDVNY----ITGIFNQYVDMVN-L--------- 264 (345)
Q Consensus 219 ~~~~~~---~~~~~~~~---~-~--~~-----------~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~--------- 264 (345)
...... ........ . . .. ...+...+...... .......+..... .
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 258 (343)
T PRK08775 179 AAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNA 258 (343)
T ss_pred HHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhH
Confidence 111111 00000000 0 0 00 00011111111000 0000111111000 0
Q ss_pred HHHhhCchhh-hccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc-CCcEEEEeCC-CCCcccccChHHHHHHHHHHHHh
Q psy4974 265 IFKSYGRNVY-QELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL-KFCQYYQFSS-GGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 265 ~~~~~~~~~~-~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
........+. ...+.++++|+|+|+|++|.++|.+..+.+.+.+ ++++++++++ +||.+++|+|++|++.|.+||++
T Consensus 259 ~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 259 YLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRS 338 (343)
T ss_pred HHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHh
Confidence 0000000001 2236789999999999999999999889998888 6899999985 99999999999999999999987
Q ss_pred hccC
Q psy4974 342 ENKT 345 (345)
Q Consensus 342 ~~k~ 345 (345)
...|
T Consensus 339 ~~~~ 342 (343)
T PRK08775 339 TGET 342 (343)
T ss_pred cccc
Confidence 6543
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-28 Score=213.20 Aligned_cols=251 Identities=20% Similarity=0.224 Sum_probs=167.3
Q ss_pred eeeEEEcCceEEEEEcCC-C-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS-G-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~-~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
+.++++++..+.|...+. + +++|||+||+++++...|..+...|.+.||+|+++|+|| +|.|..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G-------------~G~s~~~ 70 (288)
T TIGR01250 4 EGIITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLG-------------CGYSDQP 70 (288)
T ss_pred cceecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCC-------------CCCCCCC
Confidence 346677888888887663 3 479999999877754566767777776689999999999 9999755
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccC
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSN 231 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 231 (345)
.... ...+++++++++.++++.++.++++++||||||.+++.+|..+|++++++|++++.................+..
T Consensus 71 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 149 (288)
T TIGR01250 71 DDSD-ELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPP 149 (288)
T ss_pred Cccc-ccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcCh
Confidence 3221 123678889999999999999999999999999999999999999999999998765432221111000000000
Q ss_pred --------------CC-hhhHHHHHHHcc----cCCchhhhhHHHHHHHH-HHHHH------------hhCchhhhccCC
Q psy4974 232 --------------WS-PMARSEVLKAYD----NDVNYITGIFNQYVDMV-NLIFK------------SYGRNVYQELLP 279 (345)
Q Consensus 232 --------------~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~------------~~~~~~~~~~l~ 279 (345)
+. ..........+. ... ............. ...+. .....+....+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 228 (288)
T TIGR01250 150 EVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTR-KWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLS 228 (288)
T ss_pred hHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccc-cchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhh
Confidence 00 000000000000 000 0000000000000 00000 001112334567
Q ss_pred CCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 280 YVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 280 ~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
++++|+++++|++|.+ ++...+.+.+.+++.++++++++||+.+.++|+++++.|.+||+
T Consensus 229 ~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 229 EIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred ccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 8899999999999985 56788889988899999999999999999999999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-28 Score=216.54 Aligned_cols=246 Identities=15% Similarity=0.145 Sum_probs=168.3
Q ss_pred EEEcCceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC
Q psy4974 77 FSIKGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF 155 (345)
Q Consensus 77 ~~~~g~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~ 155 (345)
+..+|.+++|.+.|++ .|+|||+||++++. ..|+.+++.|++. |+|+++|+|| ||.|+.+....
T Consensus 110 ~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~-~~w~~~~~~L~~~-~~Via~DlpG-------------~G~S~~p~~~~ 174 (383)
T PLN03084 110 ASSDLFRWFCVESGSNNNPPVLLIHGFPSQA-YSYRKVLPVLSKN-YHAIAFDWLG-------------FGFSDKPQPGY 174 (383)
T ss_pred EcCCceEEEEEecCCCCCCeEEEECCCCCCH-HHHHHHHHHHhcC-CEEEEECCCC-------------CCCCCCCcccc
Confidence 4568899999999863 47999999999995 9999999999875 9999999999 99998764321
Q ss_pred CCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch-hHHHHHHhHh-----c
Q psy4974 156 VPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID-NVRVFEGMRR-----L 229 (345)
Q Consensus 156 ~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~-----~ 229 (345)
....+++++++++.++++++++++++|+|||+||.+++.+|.++|++|+++|+++++...... .......+.. .
T Consensus 175 ~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~ 254 (383)
T PLN03084 175 GFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEI 254 (383)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhh
Confidence 011278889999999999999999999999999999999999999999999999987542110 0111110000 0
Q ss_pred cCCChhh--------------HHHHHHHcccCCchhhhh-HHHHHHHHHHHHHhhCc---hhhhcc--CCCCCCCEEEEE
Q psy4974 230 SNWSPMA--------------RSEVLKAYDNDVNYITGI-FNQYVDMVNLIFKSYGR---NVYQEL--LPYVDVPVLVFH 289 (345)
Q Consensus 230 ~~~~~~~--------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~--l~~i~~Pvl~i~ 289 (345)
....... .......+... +.... .......+...+..... ...... ...+++|+++|+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~ 332 (383)
T PLN03084 255 FSQDPLRASDKALTSCGPYAMKEDDAMVYRRP--YLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCW 332 (383)
T ss_pred hhcchHHHHhhhhcccCccCCCHHHHHHHhcc--ccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEe
Confidence 0000000 00000000000 00000 00000111111110000 001111 135799999999
Q ss_pred eCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 290 SADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 290 G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
|+.|.+++.+..+.+++. ++.++++++++||+++.|+|+++++.|.+||.
T Consensus 333 G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 333 GLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred eCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 999999999888888887 58899999999999999999999999999986
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-29 Score=210.56 Aligned_cols=220 Identities=25% Similarity=0.354 Sum_probs=158.5
Q ss_pred EEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh
Q psy4974 96 LFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLL 175 (345)
Q Consensus 96 vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~ 175 (345)
|||+||++++. ..|..+++.|+ +||+|+++|+|| +|.|+.+.. + ...++++.++++.++++++
T Consensus 1 vv~~hG~~~~~-~~~~~~~~~l~-~~~~v~~~d~~G-------------~G~s~~~~~-~-~~~~~~~~~~~l~~~l~~~ 63 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESWDPLAEALA-RGYRVIAFDLPG-------------HGRSDPPPD-Y-SPYSIEDYAEDLAELLDAL 63 (228)
T ss_dssp EEEE-STTTTG-GGGHHHHHHHH-TTSEEEEEECTT-------------STTSSSHSS-G-SGGSHHHHHHHHHHHHHHT
T ss_pred eEEECCCCCCH-HHHHHHHHHHh-CCCEEEEEecCC-------------ccccccccc-c-CCcchhhhhhhhhhccccc
Confidence 79999999995 99999999996 679999999999 999976653 2 3447889999999999999
Q ss_pred CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh--HHHHHHhHhccCCChh-----hHHHHHHHcccCC
Q psy4974 176 GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN--VRVFEGMRRLSNWSPM-----ARSEVLKAYDNDV 248 (345)
Q Consensus 176 ~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 248 (345)
+.++++++|||+||.+++.++.++|++|+++|++++........ ......+..+...... ....+...+...
T Consensus 64 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 142 (228)
T PF12697_consen 64 GIKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGD- 142 (228)
T ss_dssp TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH-
T ss_pred ccccccccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccc-
Confidence 99999999999999999999999999999999999987643222 1111111111100000 011111111111
Q ss_pred chhhhhHHHHHHHHHHHHHh-hCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 249 NYITGIFNQYVDMVNLIFKS-YGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
............+...+.. ....+....+..+++|+++++|++|.+++.+..+.+.+.++++++++++++||++++++
T Consensus 143 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 221 (228)
T PF12697_consen 143 -EPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQ 221 (228)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHS
T ss_pred -cccccccccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHC
Confidence 1222222222222222222 12233345567779999999999999999999999999999999999999999999999
Q ss_pred hHHHHHH
Q psy4974 328 GQVFNEI 334 (345)
Q Consensus 328 ~~~~~~~ 334 (345)
|++++++
T Consensus 222 p~~~~~a 228 (228)
T PF12697_consen 222 PDEVAEA 228 (228)
T ss_dssp HHHHHHH
T ss_pred HHHHhcC
Confidence 9999874
|
... |
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-28 Score=217.70 Aligned_cols=255 Identities=13% Similarity=0.206 Sum_probs=163.6
Q ss_pred eeeEEEcCceEEEEEcCC----CCceEEEEcCcCCCchhhHHHHH---HhhCCCCeEEEEeCCCCchhhhccCCccCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS----GAQVLFFTYGVLGEIRNSFKKQL---TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYG 146 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~~~~~~---~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G 146 (345)
+.-.+++|.+++|...|+ ++|+||++||++++. ..|..++ +.|...+|+|+++|+|| ||
T Consensus 18 ~~g~~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~-~~~~~~~~~~~~l~~~~~~vi~~D~~G-------------~G 83 (339)
T PRK07581 18 QSGATLPDARLAYKTYGTLNAAKDNAILYPTWYSGTH-QDNEWLIGPGRALDPEKYFIIIPNMFG-------------NG 83 (339)
T ss_pred cCCCCcCCceEEEEecCccCCCCCCEEEEeCCCCCCc-ccchhhccCCCccCcCceEEEEecCCC-------------CC
Confidence 344567899999999986 234566666666563 5665554 46765569999999999 99
Q ss_pred CCCCCCC---CCCCccc-----hHHHHHHHH-HHHHHhCCccE-EEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCC
Q psy4974 147 QSLPKGR---SFVPFQY-----IEEDVDIAY-ELLKLLGVCKV-SLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLT 216 (345)
Q Consensus 147 ~s~~~~~---~~~~~~~-----~~~~~~~~~-~~l~~~~~~~i-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 216 (345)
.|+.+.. .| +.+. +.+.+.... .++++++++++ +|+||||||.+|+.+|.++|++|+++|++++.....
T Consensus 84 ~S~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~ 162 (339)
T PRK07581 84 LSSSPSNTPAPF-NAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTT 162 (339)
T ss_pred CCCCCCCCCCCC-CCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCC
Confidence 9975542 23 3322 333333322 36678999995 799999999999999999999999999998766533
Q ss_pred chhHHHHHHh----HhccCCC--------hhhHHH----HH------HHcccCC--ch----hhhhHHHHH---------
Q psy4974 217 IDNVRVFEGM----RRLSNWS--------PMARSE----VL------KAYDNDV--NY----ITGIFNQYV--------- 259 (345)
Q Consensus 217 ~~~~~~~~~~----~~~~~~~--------~~~~~~----~~------~~~~~~~--~~----~~~~~~~~~--------- 259 (345)
.......... ..-..|. ...... .. ..+.... .. .........
T Consensus 163 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (339)
T PRK07581 163 PHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDP 242 (339)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCc
Confidence 2211111111 0000110 000000 00 0000000 00 000000000
Q ss_pred HHHHHHHHhh------C----chhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCC-CCCcccccCh
Q psy4974 260 DMVNLIFKSY------G----RNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSS-GGHSCHIKHG 328 (345)
Q Consensus 260 ~~~~~~~~~~------~----~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~ 328 (345)
......+... . ..+....+.++++|+|+|+|++|.++|+..++.+.+.+++++++++++ +||+.+++++
T Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~ 322 (339)
T PRK07581 243 NNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQN 322 (339)
T ss_pred ccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCc
Confidence 0011111000 0 113456678899999999999999999999999999999999999998 8999999999
Q ss_pred HHHHHHHHHHHHhhc
Q psy4974 329 QVFNEISRNFILEEN 343 (345)
Q Consensus 329 ~~~~~~i~~fl~~~~ 343 (345)
+++++.|.+||++..
T Consensus 323 ~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 323 PADIAFIDAALKELL 337 (339)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998753
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-28 Score=206.41 Aligned_cols=224 Identities=18% Similarity=0.244 Sum_probs=151.6
Q ss_pred CCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 90 GSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 90 g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
|+++|+|||+||++++. ..|..+++.|.+. |+|+++|+|| +|.|.... .+ ++++.++++.
T Consensus 1 g~g~~~iv~~HG~~~~~-~~~~~~~~~l~~~-~~vi~~d~~G-------------~G~s~~~~-~~----~~~~~~~~~~ 60 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNA-EVFRCLDEELSAH-FTLHLVDLPG-------------HGRSRGFG-PL----SLADAAEAIA 60 (245)
T ss_pred CCCCceEEEEcCCCCch-hhHHHHHHhhccC-eEEEEecCCc-------------CccCCCCC-Cc----CHHHHHHHHH
Confidence 34557999999999995 9999999999875 9999999999 99986432 22 5666666655
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh-------HHHHHHhHh-ccC-CChhhHHHH
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN-------VRVFEGMRR-LSN-WSPMARSEV 240 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-------~~~~~~~~~-~~~-~~~~~~~~~ 240 (345)
+.+ .++++++||||||.+++.+|.++|++++++|++++.+...... ......... ... .........
T Consensus 61 ~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (245)
T TIGR01738 61 AQA----PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFL 136 (245)
T ss_pred HhC----CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHH
Confidence 443 3699999999999999999999999999999998765321110 001111000 000 000000000
Q ss_pred H-HHcccCCchhhhhHHHH-----------HHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc
Q psy4974 241 L-KAYDNDVNYITGIFNQY-----------VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL 308 (345)
Q Consensus 241 ~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~ 308 (345)
. ..+... ......... ...+...+......+....+.++++|+++++|++|.++|.+..+.+.+.+
T Consensus 137 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~ 214 (245)
T TIGR01738 137 ALQTLGTP--TARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA 214 (245)
T ss_pred HHHHhcCC--ccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC
Confidence 0 001110 000000000 01111112222223334567789999999999999999999999999999
Q ss_pred CCcEEEEeCCCCCcccccChHHHHHHHHHHH
Q psy4974 309 KFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 309 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
+++++++++++||++++|+|+++++.|.+|+
T Consensus 215 ~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 215 PHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 9999999999999999999999999999986
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=213.06 Aligned_cols=247 Identities=14% Similarity=0.126 Sum_probs=162.7
Q ss_pred eeEEEcCceEEEEEcCC-----CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGS-----GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~-----~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
.+...+|.+++|..+++ .+++|||+||++.+....|..++..|+++||+|+++|+|| ||.|+
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rG-------------hG~S~ 102 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEG-------------HGRSE 102 (330)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCC-------------CCCCC
Confidence 33445999999987642 2357999999986632467777888998899999999999 99996
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHhCC------ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh----
Q psy4974 150 PKGRSFVPFQYIEEDVDIAYELLKLLGV------CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN---- 219 (345)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~---- 219 (345)
.... ...+++..++|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|+++|........
T Consensus 103 ~~~~---~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 179 (330)
T PLN02298 103 GLRA---YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPW 179 (330)
T ss_pred Cccc---cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCch
Confidence 4332 123567778888888887643 379999999999999999999999999999999865432110
Q ss_pred --HHHHHHhHhcc-CC--Ch-------hhHHH-HHHHcccCC-chhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCE
Q psy4974 220 --VRVFEGMRRLS-NW--SP-------MARSE-VLKAYDNDV-NYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPV 285 (345)
Q Consensus 220 --~~~~~~~~~~~-~~--~~-------~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 285 (345)
......+.... .. .. ..... ......... .+.......+...+.... ......+.++++|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~Pv 254 (330)
T PLN02298 180 PIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVT-----DYLGKKLKDVSIPF 254 (330)
T ss_pred HHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHH-----HHHHHhhhhcCCCE
Confidence 00001111000 00 00 00000 000000000 000000000111111110 11245577889999
Q ss_pred EEEEeCCCCCCChHHHHHHHhhcC--CcEEEEeCCCCCcccccChH----HHHHHHHHHHHhh
Q psy4974 286 LVFHSADDVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCHIKHGQ----VFNEISRNFILEE 342 (345)
Q Consensus 286 l~i~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~~ 342 (345)
|+++|++|.++|.+.++.+++.++ +.+++++++++|.++.++|+ ++.+.+.+||.+.
T Consensus 255 Lii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 255 IVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred EEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988774 78999999999999998875 4677888998765
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-28 Score=218.04 Aligned_cols=252 Identities=17% Similarity=0.259 Sum_probs=167.7
Q ss_pred eEEEcCceEEEEEcCC----CCceEEEEcCcCCCchh----------hHHHHH---HhhCCCCeEEEEeCCCCchhhhcc
Q psy4974 76 FFSIKGCDIRFIKYGS----GAQVLFFTYGVLGEIRN----------SFKKQL---TAFDPKLFTSIFWDPPGNVVLYLL 138 (345)
Q Consensus 76 ~~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~----------~~~~~~---~~L~~~G~~vi~~D~~G~~~~~~~ 138 (345)
-..++|.+|+|..+|+ +.++|||+||++++... .|..++ ..|..++|+|+++|+||
T Consensus 10 g~~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G------- 82 (351)
T TIGR01392 10 GGVLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLG------- 82 (351)
T ss_pred CCccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCC-------
Confidence 3456899999999984 34799999999997422 477775 25655679999999999
Q ss_pred CCccCCC-CCCCCC-----CC-CCC---CccchHHHHHHHHHHHHHhCCcc-EEEEEeChhHHHHHHHHHhCCcccceee
Q psy4974 139 GKTCSGY-GQSLPK-----GR-SFV---PFQYIEEDVDIAYELLKLLGVCK-VSLFGWCDGGHLSFVFSMKYPHMVHKLV 207 (345)
Q Consensus 139 g~~~~~~-G~s~~~-----~~-~~~---~~~~~~~~~~~~~~~l~~~~~~~-i~lvGhS~Gg~ia~~~a~~~p~~v~~lv 207 (345)
+ +.++.+ .. .+. ...+++++++++.++++++++++ ++++||||||.+++.+|.++|++|+++|
T Consensus 83 ------~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lv 156 (351)
T TIGR01392 83 ------GCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIV 156 (351)
T ss_pred ------CCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEE
Confidence 6 223221 11 010 12368899999999999999998 9999999999999999999999999999
Q ss_pred EeccCCCCCchhHHHHH----HhHhccCCC---------h--hh-------------HHHHHHHcccCCchh--h-----
Q psy4974 208 IWGTKSFLTIDNVRVFE----GMRRLSNWS---------P--MA-------------RSEVLKAYDNDVNYI--T----- 252 (345)
Q Consensus 208 l~~~~~~~~~~~~~~~~----~~~~~~~~~---------~--~~-------------~~~~~~~~~~~~~~~--~----- 252 (345)
++++............. .+.....+. + .. ...+...+....... .
T Consensus 157 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 236 (351)
T TIGR01392 157 VLATSARHSAWCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFD 236 (351)
T ss_pred EEccCCcCCHHHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccC
Confidence 99987654432211111 111000000 0 00 001111121110000 0
Q ss_pred --hhHHHHH--------H--------HHHHHHHhhCc----hhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC
Q psy4974 253 --GIFNQYV--------D--------MVNLIFKSYGR----NVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF 310 (345)
Q Consensus 253 --~~~~~~~--------~--------~~~~~~~~~~~----~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~ 310 (345)
...+.+. . .....+..... .+..+.+.+|++|+|+|+|++|.++|+..++.+++.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~ 316 (351)
T TIGR01392 237 TRFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPA 316 (351)
T ss_pred ccchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhh
Confidence 0001111 0 00111111110 123567889999999999999999999999999999998
Q ss_pred cEEE-----EeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 311 CQYY-----QFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 311 ~~~~-----~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.++. +++++||.+++++|+++++.|.+||+
T Consensus 317 ~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 317 AGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred cCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 7665 56789999999999999999999984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=204.17 Aligned_cols=222 Identities=15% Similarity=0.166 Sum_probs=148.9
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
.|+|||+||++++. ..|..+++.|+ +|+|+++|+|| ||.|+.+.. .+++++++++.+++
T Consensus 2 ~p~vvllHG~~~~~-~~w~~~~~~l~--~~~vi~~D~~G-------------~G~S~~~~~-----~~~~~~~~~l~~~l 60 (242)
T PRK11126 2 LPWLVFLHGLLGSG-QDWQPVGEALP--DYPRLYIDLPG-------------HGGSAAISV-----DGFADVSRLLSQTL 60 (242)
T ss_pred CCEEEEECCCCCCh-HHHHHHHHHcC--CCCEEEecCCC-------------CCCCCCccc-----cCHHHHHHHHHHHH
Confidence 46899999999995 99999999884 49999999999 999976532 27888999999999
Q ss_pred HHhCCccEEEEEeChhHHHHHHHHHhCCcc-cceeeEeccCCCCCchhHHHHHHhH---hccCCC-hhhHHHHHHHcccC
Q psy4974 173 KLLGVCKVSLFGWCDGGHLSFVFSMKYPHM-VHKLVIWGTKSFLTIDNVRVFEGMR---RLSNWS-PMARSEVLKAYDND 247 (345)
Q Consensus 173 ~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~ 247 (345)
+.++.++++++||||||.+|+.+|.++|+. |++++++++................ ...... ......+..++...
T Consensus 61 ~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (242)
T PRK11126 61 QSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQP 140 (242)
T ss_pred HHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcc
Confidence 999999999999999999999999998654 9999999876543322111110000 000000 00111111111100
Q ss_pred --CchhhhhHHHHH--------HHHHHHHHhh---CchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEE
Q psy4974 248 --VNYITGIFNQYV--------DMVNLIFKSY---GRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYY 314 (345)
Q Consensus 248 --~~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~ 314 (345)
............ .....++... ...+....+.++++|+++++|++|..+. .+.+. .+++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~~~~~ 214 (242)
T PRK11126 141 VFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-LALPLH 214 (242)
T ss_pred hhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-hcCeEE
Confidence 000000011000 0111111111 1223455678899999999999998553 22333 378999
Q ss_pred EeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 315 QFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 315 ~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+++++||+++.|+|+++++.|.+||+.
T Consensus 215 ~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 215 VIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred EeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 999999999999999999999999964
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=216.78 Aligned_cols=254 Identities=15% Similarity=0.297 Sum_probs=169.7
Q ss_pred eeEEEcCceEEEEEcCC----CCceEEEEcCcCCCchhh-------------HHHHHH---hhCCCCeEEEEeCCCCchh
Q psy4974 75 GFFSIKGCDIRFIKYGS----GAQVLFFTYGVLGEIRNS-------------FKKQLT---AFDPKLFTSIFWDPPGNVV 134 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~-------------~~~~~~---~L~~~G~~vi~~D~~G~~~ 134 (345)
.-..++|.+++|..+|+ +.|+|||+||++++. .. |..++. .|..++|+|+++|++|
T Consensus 26 ~g~~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~-~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G--- 101 (379)
T PRK00175 26 SGAVLPPVELAYETYGTLNADRSNAVLICHALTGDH-HVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLG--- 101 (379)
T ss_pred CCCCcCCceEEEEeccccCCCCCCEEEEeCCcCCch-hhcccccccCCCCcchhhccCCCCccCccceEEEeccCCC---
Confidence 34566889999999985 247999999999995 53 666652 4434469999999998
Q ss_pred hhccCCccCCC-CCCCCCC-------C----CCCCccchHHHHHHHHHHHHHhCCcc-EEEEEeChhHHHHHHHHHhCCc
Q psy4974 135 LYLLGKTCSGY-GQSLPKG-------R----SFVPFQYIEEDVDIAYELLKLLGVCK-VSLFGWCDGGHLSFVFSMKYPH 201 (345)
Q Consensus 135 ~~~~g~~~~~~-G~s~~~~-------~----~~~~~~~~~~~~~~~~~~l~~~~~~~-i~lvGhS~Gg~ia~~~a~~~p~ 201 (345)
+ |.|+.+. . .+ ...+++++++++.++++++++++ ++++||||||.+++.+|.++|+
T Consensus 102 ----------~~~~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~ 170 (379)
T PRK00175 102 ----------GCKGSTGPSSINPDTGKPYGSDF-PVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPD 170 (379)
T ss_pred ----------CCCCCCCCCCCCCCCCCcccCCC-CcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChH
Confidence 4 4443221 0 11 12378899999999999999999 5899999999999999999999
Q ss_pred ccceeeEeccCCCCCchhHHHH----HHhHhccCCC----------hh----h-----------HHHHHHHcccCCc--h
Q psy4974 202 MVHKLVIWGTKSFLTIDNVRVF----EGMRRLSNWS----------PM----A-----------RSEVLKAYDNDVN--Y 250 (345)
Q Consensus 202 ~v~~lvl~~~~~~~~~~~~~~~----~~~~~~~~~~----------~~----~-----------~~~~~~~~~~~~~--~ 250 (345)
+|+++|++++............ ..+.....|. +. . ...+...+..... .
T Consensus 171 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~ 250 (379)
T PRK00175 171 RVRSALVIASSARLSAQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGE 250 (379)
T ss_pred hhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccc
Confidence 9999999998765433211111 1111100000 00 0 0011111211100 0
Q ss_pred h------hhhHHHHHH----------------HHHHHHHhhCc-----hhhhccCCCCCCCEEEEEeCCCCCCChHHHHH
Q psy4974 251 I------TGIFNQYVD----------------MVNLIFKSYGR-----NVYQELLPYVDVPVLVFHSADDVMVSTQQVQS 303 (345)
Q Consensus 251 ~------~~~~~~~~~----------------~~~~~~~~~~~-----~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~ 303 (345)
. ....+.+.. .....+..... .+....+.+|++|+|+|+|++|.++|++.++.
T Consensus 251 ~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~ 330 (379)
T PRK00175 251 LPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSRE 330 (379)
T ss_pred cccCCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHH
Confidence 0 000111110 00111111110 12456778999999999999999999999999
Q ss_pred HHhhcCCc----EEEEeC-CCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 304 LLNQLKFC----QYYQFS-SGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 304 ~~~~~~~~----~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+++.++++ ++++++ ++||+.++|+|+++++.|.+||.+..
T Consensus 331 la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 331 IVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred HHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 99999876 777775 89999999999999999999998754
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-27 Score=205.90 Aligned_cols=242 Identities=14% Similarity=0.116 Sum_probs=163.5
Q ss_pred EcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCc
Q psy4974 79 IKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPF 158 (345)
Q Consensus 79 ~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~ 158 (345)
-+|-+++|...+..+|+|||+||++++. ..|..+...|.+.||+|+++|+|| ||.|..... ..
T Consensus 4 ~~~~~~~~~~~~~~~p~vvliHG~~~~~-~~w~~~~~~L~~~g~~vi~~dl~g-------------~G~s~~~~~---~~ 66 (273)
T PLN02211 4 ENGEEVTDMKPNRQPPHFVLIHGISGGS-WCWYKIRCLMENSGYKVTCIDLKS-------------AGIDQSDAD---SV 66 (273)
T ss_pred ccccccccccccCCCCeEEEECCCCCCc-CcHHHHHHHHHhCCCEEEEecccC-------------CCCCCCCcc---cC
Confidence 3788888888655667999999999995 899999999988889999999999 998753322 12
Q ss_pred cchHHHHHHHHHHHHHhC-CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch-h-HHHHHHhHhcc---C-
Q psy4974 159 QYIEEDVDIAYELLKLLG-VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID-N-VRVFEGMRRLS---N- 231 (345)
Q Consensus 159 ~~~~~~~~~~~~~l~~~~-~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~-~~~~~~~~~~~---~- 231 (345)
.+++++++++.++++.++ .++++|+||||||.++..++..+|++|+++|++++....... . ........... .
T Consensus 67 ~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 146 (273)
T PLN02211 67 TTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDV 146 (273)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccc
Confidence 378888999999999885 579999999999999999999999999999999875331111 0 00000000000 0
Q ss_pred ----CC---------hhhHHH-HHHHcccCCchhhhhHHHHHHHHHH--HHHhhCchhhhccCCCC-CCCEEEEEeCCCC
Q psy4974 232 ----WS---------PMARSE-VLKAYDNDVNYITGIFNQYVDMVNL--IFKSYGRNVYQELLPYV-DVPVLVFHSADDV 294 (345)
Q Consensus 232 ----~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~i-~~Pvl~i~G~~D~ 294 (345)
+. ...... ....+... .......+...... ...............++ ++|+++|.|++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~ 223 (273)
T PLN02211 147 YELGFGLGPDQPPTSAIIKKEFRRKILYQM---SPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDH 223 (273)
T ss_pred eeeeeccCCCCCCceeeeCHHHHHHHHhcC---CCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCC
Confidence 00 000000 00010000 00000000000000 00001111111223344 7899999999999
Q ss_pred CCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 295 MVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 295 ~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
.+|++..+.+.+.+++.+++.++ +||.+++++|+++++.|.++...
T Consensus 224 ~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 224 VVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred CCCHHHHHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 99999999999999988999996 89999999999999999988754
|
|
| >KOG4409|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-27 Score=199.56 Aligned_cols=251 Identities=19% Similarity=0.269 Sum_probs=164.8
Q ss_pred eeeEEE-cCceEEEEEcC---CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC
Q psy4974 74 EGFFSI-KGCDIRFIKYG---SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 74 ~~~~~~-~g~~l~~~~~g---~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
..++.+ ++..++..... ..++++|+|||+|++. ..|..-.+.|++. ++|+++|++| +|.|+
T Consensus 67 ~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~-g~f~~Nf~~La~~-~~vyaiDllG-------------~G~SS 131 (365)
T KOG4409|consen 67 KKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGL-GLFFRNFDDLAKI-RNVYAIDLLG-------------FGRSS 131 (365)
T ss_pred eeeeecCCCceeEEEeecccccCCCcEEEEeccchhH-HHHHHhhhhhhhc-CceEEecccC-------------CCCCC
Confidence 344444 44445444332 3457999999999995 9999999999996 9999999999 99999
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch-h--------H
Q psy4974 150 PKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID-N--------V 220 (345)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~--------~ 220 (345)
.|.-..........+++.++++....++++.+|+|||+||++|..||.+||++|+.|||++|....... . .
T Consensus 132 RP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~ 211 (365)
T KOG4409|consen 132 RPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPP 211 (365)
T ss_pred CCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCCh
Confidence 886544122234567899999999999999999999999999999999999999999999998765422 1 1
Q ss_pred HHH-------------HHhHhccCCChhhH----HHHHHHcccCCchhhhhHHHHH-----------HHHHHHHHh--hC
Q psy4974 221 RVF-------------EGMRRLSNWSPMAR----SEVLKAYDNDVNYITGIFNQYV-----------DMVNLIFKS--YG 270 (345)
Q Consensus 221 ~~~-------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~--~~ 270 (345)
.++ ..++....+.+... ......+... ...+..-+++ ..+..++.. +.
T Consensus 212 ~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~--~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~A 289 (365)
T KOG4409|consen 212 EWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSL--IEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWA 289 (365)
T ss_pred HHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhcccc--chhHHHHHHHHHhcCCCCcHHHHHHHHHhccchh
Confidence 111 11111112221111 1111111110 0011101110 011111111 11
Q ss_pred chhhhccCCCC--CCCEEEEEeCCCCCCChHHHHHHHhhc--CCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 271 RNVYQELLPYV--DVPVLVFHSADDVMVSTQQVQSLLNQL--KFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 271 ~~~~~~~l~~i--~~Pvl~i~G~~D~~v~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
...+.+.+..+ +||+++|+|++|- ++.....++.+.+ ..++.++++++||+..+++|+.|++.+.++++..
T Consensus 290 r~Pm~~r~~~l~~~~pv~fiyG~~dW-mD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 290 RRPMIQRLRELKKDVPVTFIYGDRDW-MDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred hhhHHHHHHhhccCCCEEEEecCccc-ccchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 12233334444 4999999999995 4555666666543 3589999999999999999999999999998753
|
|
| >KOG1454|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=210.61 Aligned_cols=235 Identities=19% Similarity=0.279 Sum_probs=161.0
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
.+|+||++||++++. ..|+.++..|.+. |+.|+++|++| +|.++..+.. ...+..+.++.+..
T Consensus 57 ~~~pvlllHGF~~~~-~~w~~~~~~L~~~~~~~v~aiDl~G-------------~g~~s~~~~~--~~y~~~~~v~~i~~ 120 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASS-FSWRRVVPLLSKAKGLRVLAIDLPG-------------HGYSSPLPRG--PLYTLRELVELIRR 120 (326)
T ss_pred CCCcEEEeccccCCc-ccHhhhccccccccceEEEEEecCC-------------CCcCCCCCCC--CceehhHHHHHHHH
Confidence 457999999999985 9999999999877 69999999999 9955433322 22367788888999
Q ss_pred HHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceee---EeccCCCCCchhHHHHH-HhH----hccCCChhhHHHHHH
Q psy4974 171 LLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLV---IWGTKSFLTIDNVRVFE-GMR----RLSNWSPMARSEVLK 242 (345)
Q Consensus 171 ~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lv---l~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~ 242 (345)
+......++++++|||+||.+|+.+|+.+|+.|++++ ++++............. .+. ....+.+........
T Consensus 121 ~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 200 (326)
T KOG1454|consen 121 FVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVR 200 (326)
T ss_pred HHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchh
Confidence 9998888899999999999999999999999999999 66665554333322111 111 011111110000000
Q ss_pred HcccC----C----chhhhhHHHHHH-------------HHHHHHHhhCc--hhhhccCCCCC-CCEEEEEeCCCCCCCh
Q psy4974 243 AYDND----V----NYITGIFNQYVD-------------MVNLIFKSYGR--NVYQELLPYVD-VPVLVFHSADDVMVST 298 (345)
Q Consensus 243 ~~~~~----~----~~~~~~~~~~~~-------------~~~~~~~~~~~--~~~~~~l~~i~-~Pvl~i~G~~D~~v~~ 298 (345)
.+... . ......+..... ....++..... ......+.++. ||+|+++|++|+++|.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~ 280 (326)
T KOG1454|consen 201 LVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPL 280 (326)
T ss_pred heeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCH
Confidence 00000 0 000000111110 00111111111 22233455666 9999999999999999
Q ss_pred HHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 299 QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+.+..+.+.+|++++++++++||.+++|.|+++++.|..|+.+.
T Consensus 281 ~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 281 ELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred HHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999865
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=209.80 Aligned_cols=244 Identities=17% Similarity=0.241 Sum_probs=168.0
Q ss_pred eeEEEcCceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
..+..++..++|...+++ .|+|||+||++++. ..|..+...|.+. |+|+++|+|| ||.|.....
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g-------------~G~s~~~~~ 176 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDL-NNWLFNHAALAAG-RPVIALDLPG-------------HGASSKAVG 176 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCcc-chHHHHHHHHhcC-CEEEEEcCCC-------------CCCCCCCCC
Confidence 445678888999888753 47999999999995 9999999999876 9999999999 999965443
Q ss_pred CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCC
Q psy4974 154 SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWS 233 (345)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (345)
.. +++++++++.++++.++.++++++|||+||.+|+.+|..+|+++.++|++++..............+.... ..
T Consensus 177 ~~----~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~-~~ 251 (371)
T PRK14875 177 AG----SLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAE-SR 251 (371)
T ss_pred CC----CHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhccc-ch
Confidence 33 67888999999999999889999999999999999999999999999999886543322111111111000 00
Q ss_pred hhhHHHHHHHcccCCchhhhhHHHH---------HHHHHHHHHh-----hCchhhhccCCCCCCCEEEEEeCCCCCCChH
Q psy4974 234 PMARSEVLKAYDNDVNYITGIFNQY---------VDMVNLIFKS-----YGRNVYQELLPYVDVPVLVFHSADDVMVSTQ 299 (345)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~-----~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~ 299 (345)
......+...+.............. ...+...... ....+....+.++++|+++++|++|.++|.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~ 331 (371)
T PRK14875 252 RELKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAA 331 (371)
T ss_pred hHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHH
Confidence 0011111111111000000000000 0001111000 0112334456778999999999999999987
Q ss_pred HHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 300 QVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
..+.+. ++.++.+++++||++++++|+++++.|.+||++
T Consensus 332 ~~~~l~---~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 332 HAQGLP---DGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred HHhhcc---CCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 665443 468999999999999999999999999999975
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=196.62 Aligned_cols=227 Identities=19% Similarity=0.262 Sum_probs=153.8
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH-HHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI-AYELL 172 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~-~~~~l 172 (345)
|+||++||++++. ..|..+++.|+ +||+|+++|+|| +|.|+.+... ...++++.+++ +..++
T Consensus 2 ~~vv~~hG~~~~~-~~~~~~~~~L~-~~~~v~~~d~~g-------------~G~s~~~~~~--~~~~~~~~~~~~~~~~~ 64 (251)
T TIGR03695 2 PVLVFLHGFLGSG-ADWQALIELLG-PHFRCLAIDLPG-------------HGSSQSPDEI--ERYDFEEAAQDILATLL 64 (251)
T ss_pred CEEEEEcCCCCch-hhHHHHHHHhc-ccCeEEEEcCCC-------------CCCCCCCCcc--ChhhHHHHHHHHHHHHH
Confidence 6899999999995 99999999998 679999999999 9999765432 33467788888 77788
Q ss_pred HHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh------HhccCCChhhHHHHHHHc--
Q psy4974 173 KLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM------RRLSNWSPMARSEVLKAY-- 244 (345)
Q Consensus 173 ~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-- 244 (345)
+.++.++++++|||+||.+|+.+|.++|+.|++++++++............... ..+... ........++
T Consensus 65 ~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 142 (251)
T TIGR03695 65 DQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQE--GLEAFLDDWYQQ 142 (251)
T ss_pred HHcCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhc--CccHHHHHHhcC
Confidence 888888999999999999999999999999999999998654332211110000 000000 0000000000
Q ss_pred ---ccCCchhhhhHHHH--------HHHHHHHHH---hhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC
Q psy4974 245 ---DNDVNYITGIFNQY--------VDMVNLIFK---SYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF 310 (345)
Q Consensus 245 ---~~~~~~~~~~~~~~--------~~~~~~~~~---~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~ 310 (345)
.............. ...+...+. ..........+.++++|+++++|++|..++ +..+.+.+..++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~ 221 (251)
T TIGR03695 143 PLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPN 221 (251)
T ss_pred ceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCC
Confidence 00000000000000 000111111 011112234467789999999999998764 567778888899
Q ss_pred cEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 311 CQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 311 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.++++++++||++++++|+++.+.|.+||+
T Consensus 222 ~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 222 LTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred CcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 999999999999999999999999999984
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-25 Score=204.38 Aligned_cols=245 Identities=18% Similarity=0.207 Sum_probs=155.0
Q ss_pred eEEEEEcC--CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccc
Q psy4974 83 DIRFIKYG--SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY 160 (345)
Q Consensus 83 ~l~~~~~g--~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~ 160 (345)
.+++.... ...|+|||+||++++. ..|...+..|++. |+|+++|+|| ||.|+.+...+.+...
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~-~~~~~~~~~L~~~-~~vi~~D~rG-------------~G~S~~~~~~~~~~~~ 157 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQ-GFFFRNFDALASR-FRVIAIDQLG-------------WGGSSRPDFTCKSTEE 157 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcch-hHHHHHHHHHHhC-CEEEEECCCC-------------CCCCCCCCcccccHHH
Confidence 44444332 2347999999999884 8888888889876 9999999999 9999765432201111
Q ss_pred h-HHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH--HHHH--------HhH--
Q psy4974 161 I-EEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV--RVFE--------GMR-- 227 (345)
Q Consensus 161 ~-~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~--------~~~-- 227 (345)
. +..++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|+++|......... .... .+.
T Consensus 158 ~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (402)
T PLN02894 158 TEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNH 237 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHH
Confidence 2 23466777888888989999999999999999999999999999999998654322111 0000 000
Q ss_pred -------------hccCCChhhH-HHHHHHcccCC---ch---hhhhHHHHHHH----------HHHHHHh---hCchhh
Q psy4974 228 -------------RLSNWSPMAR-SEVLKAYDNDV---NY---ITGIFNQYVDM----------VNLIFKS---YGRNVY 274 (345)
Q Consensus 228 -------------~~~~~~~~~~-~~~~~~~~~~~---~~---~~~~~~~~~~~----------~~~~~~~---~~~~~~ 274 (345)
....+.+... ......+.... .. .......+... ....... ....+.
T Consensus 238 ~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (402)
T PLN02894 238 LWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPL 317 (402)
T ss_pred HhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchH
Confidence 0000000000 00001111000 00 00001011000 0001100 112344
Q ss_pred hccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-CcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 275 QELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 275 ~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
...+.++++|+++|+|++|.+.+ .....+.+..+ .+++++++++||+++.|+|++|++.|.+|++...
T Consensus 318 ~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 318 LESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYL 386 (402)
T ss_pred hhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhc
Confidence 55678899999999999998776 45555555553 5889999999999999999999999999987654
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-25 Score=200.77 Aligned_cols=239 Identities=13% Similarity=0.117 Sum_probs=159.9
Q ss_pred cCceEEEEEcCC----CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC
Q psy4974 80 KGCDIRFIKYGS----GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF 155 (345)
Q Consensus 80 ~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~ 155 (345)
++..+++..+.+ .+++||++||++++. ..|..+++.|+++||+|+++|+|| ||.|+....
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~-~~~~~~a~~L~~~Gy~V~~~D~rG-------------hG~S~~~~~-- 182 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHS-GRYLHFAKQLTSCGFGVYAMDWIG-------------HGGSDGLHG-- 182 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHH-HHHHHHHHHHHHCCCEEEEeCCCC-------------CCCCCCCCC--
Confidence 667888877643 346899999999885 889999999998899999999999 999975432
Q ss_pred CCccchHHHHHHHHHHHHHhCC----ccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCCCCchhH--HHHHHh
Q psy4974 156 VPFQYIEEDVDIAYELLKLLGV----CKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSFLTIDNV--RVFEGM 226 (345)
Q Consensus 156 ~~~~~~~~~~~~~~~~l~~~~~----~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~--~~~~~~ 226 (345)
...+++..++|+.++++.+.. .+++++||||||.+++.++. +| ++++++|+.+|......... .....+
T Consensus 183 -~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l 260 (395)
T PLN02652 183 -YVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPI 260 (395)
T ss_pred -CCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHH
Confidence 122566677788877777642 37999999999999998775 55 47999999998754332111 011000
Q ss_pred -Hhc-cCC--Ch---------hhHHHHHHHcccCCchhh-hhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCC
Q psy4974 227 -RRL-SNW--SP---------MARSEVLKAYDNDVNYIT-GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSAD 292 (345)
Q Consensus 227 -~~~-~~~--~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~ 292 (345)
... ..+ .. .........+.... ... .........+.... ......+.++++|+|+++|++
T Consensus 261 ~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~-~~~g~i~~~~~~~~~~~~-----~~l~~~L~~I~vPvLIi~G~~ 334 (395)
T PLN02652 261 FSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPL-VYTGPIRVRTGHEILRIS-----SYLTRNFKSVTVPFMVLHGTA 334 (395)
T ss_pred HHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCC-cccCCchHHHHHHHHHHH-----HHHHhhcccCCCCEEEEEeCC
Confidence 000 000 00 00011111111110 000 00000111111110 112456778999999999999
Q ss_pred CCCCChHHHHHHHhhcC--CcEEEEeCCCCCccccc-ChHHHHHHHHHHHHhh
Q psy4974 293 DVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCHIK-HGQVFNEISRNFILEE 342 (345)
Q Consensus 293 D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~ 342 (345)
|.++|++.++.+++.++ +.+++++++++|.++.+ +++++.+.+.+||+++
T Consensus 335 D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 335 DRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred CCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 99999999999988864 47899999999998776 7999999999999865
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-25 Score=195.69 Aligned_cols=247 Identities=14% Similarity=0.183 Sum_probs=156.7
Q ss_pred eeeEEE-cCceEEEEEcCC-CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 74 EGFFSI-KGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 74 ~~~~~~-~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
..++.. +|.+++|...|+ +.++|||+||++++. ..+ .+...+...+|+|+++|+|| ||.|+.+
T Consensus 6 ~~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~-~~~-~~~~~~~~~~~~vi~~D~~G-------------~G~S~~~ 70 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSG-TDP-GCRRFFDPETYRIVLFDQRG-------------CGKSTPH 70 (306)
T ss_pred CCeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCC-CCH-HHHhccCccCCEEEEECCCC-------------CCCCCCC
Confidence 455665 689999999885 236899999988774 333 34455555679999999999 9999755
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH-----------
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV----------- 220 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~----------- 220 (345)
... ...+..+.++++..+++.++.++++++||||||.+++.++.++|++|+++|++++....+....
T Consensus 71 ~~~--~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 148 (306)
T TIGR01249 71 ACL--EENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIY 148 (306)
T ss_pred CCc--ccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhC
Confidence 322 1225678899999999999999999999999999999999999999999999987654221110
Q ss_pred -HHHHHhH-hccCCC--hhhHHHHHHHcccCC-c---hhhhhHHHHH------------------------HHHHHHHHh
Q psy4974 221 -RVFEGMR-RLSNWS--PMARSEVLKAYDNDV-N---YITGIFNQYV------------------------DMVNLIFKS 268 (345)
Q Consensus 221 -~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~-~---~~~~~~~~~~------------------------~~~~~~~~~ 268 (345)
..+.... ...... ......+...+.... . .....+..+. ..+...+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (306)
T TIGR01249 149 PDAWQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFV 228 (306)
T ss_pred HHHHHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHH
Confidence 0000000 000000 011111111111110 0 0000111111 000000000
Q ss_pred ----hC-chhhhccCCCC-CCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 269 ----YG-RNVYQELLPYV-DVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 269 ----~~-~~~~~~~l~~i-~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.. .......+.++ ++|+|+|+|++|.++|.+.++.+++.+++.++++++++||.++.+ +..+.|.+|+.
T Consensus 229 ~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~i~~~~~ 303 (306)
T TIGR01249 229 NKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEAELKVTNNAGHSAFDP---NNLAALVHALE 303 (306)
T ss_pred HhchhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCCCCh---HHHHHHHHHHH
Confidence 00 11123455666 699999999999999999999999999999999999999998632 23355555544
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-25 Score=191.57 Aligned_cols=251 Identities=16% Similarity=0.186 Sum_probs=176.9
Q ss_pred eeeEEEcCceEEEEEcCCCC---ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGA---QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~---p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
..+...+|..++|..+.... .+||++||.+.++ ..|..++..|..+||.|+++|+|| ||.|..
T Consensus 12 ~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~-~ry~~la~~l~~~G~~V~~~D~RG-------------hG~S~r 77 (298)
T COG2267 12 GYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHS-GRYEELADDLAARGFDVYALDLRG-------------HGRSPR 77 (298)
T ss_pred ceeecCCCceEEEEeecCCCCCCcEEEEecCchHHH-HHHHHHHHHHHhCCCEEEEecCCC-------------CCCCCC
Confidence 56667799999999885432 4899999999996 999999999999999999999999 999973
Q ss_pred -CCCCCCCccchHHHHHHHHHHHHHhC----CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc--hhHHHH
Q psy4974 151 -KGRSFVPFQYIEEDVDIAYELLKLLG----VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI--DNVRVF 223 (345)
Q Consensus 151 -~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~ 223 (345)
... ...++.++.+++..+++... ..+++++||||||.+++.++.+++..|+++|+.+|...... ......
T Consensus 78 ~~rg---~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~ 154 (298)
T COG2267 78 GQRG---HVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILA 154 (298)
T ss_pred CCcC---CchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHH
Confidence 322 34458888889988888775 35999999999999999999999999999999999877663 111111
Q ss_pred HHh-HhccCC------Ch-----------hhHHHHHHHcccCCc-hhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCC
Q psy4974 224 EGM-RRLSNW------SP-----------MARSEVLKAYDNDVN-YITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVP 284 (345)
Q Consensus 224 ~~~-~~~~~~------~~-----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 284 (345)
... .....+ .. .......+.+..++. ........|......... .........+++|
T Consensus 155 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~----~~~~~~~~~~~~P 230 (298)
T COG2267 155 RLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGR----VPALRDAPAIALP 230 (298)
T ss_pred HHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhc----ccchhccccccCC
Confidence 100 000000 00 001112222332221 112222233333322222 1123345678899
Q ss_pred EEEEEeCCCCCCC-hHHHHHHHhhc--CCcEEEEeCCCCCcccccC-h--HHHHHHHHHHHHhhccC
Q psy4974 285 VLVFHSADDVMVS-TQQVQSLLNQL--KFCQYYQFSSGGHSCHIKH-G--QVFNEISRNFILEENKT 345 (345)
Q Consensus 285 vl~i~G~~D~~v~-~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~-~--~~~~~~i~~fl~~~~k~ 345 (345)
+|+++|++|.+++ .+...++.+.. ++.++++++|+.|.++.|. . +++.+.+.+||.+..++
T Consensus 231 vLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 231 VLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALPS 297 (298)
T ss_pred EEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhccC
Confidence 9999999999999 67777776665 5678999999999998863 4 78999999999987653
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-25 Score=174.55 Aligned_cols=222 Identities=16% Similarity=0.178 Sum_probs=155.4
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
..|+||||+.|++ ...+.+.++|.++||+|.+|.+|| ||.....--.. +..+|.+.+.+..+.+.
T Consensus 16 ~AVLllHGFTGt~-~Dvr~Lgr~L~e~GyTv~aP~ypG-------------HG~~~e~fl~t-~~~DW~~~v~d~Y~~L~ 80 (243)
T COG1647 16 RAVLLLHGFTGTP-RDVRMLGRYLNENGYTVYAPRYPG-------------HGTLPEDFLKT-TPRDWWEDVEDGYRDLK 80 (243)
T ss_pred EEEEEEeccCCCc-HHHHHHHHHHHHCCceEecCCCCC-------------CCCCHHHHhcC-CHHHHHHHHHHHHHHHH
Confidence 4899999999996 999999999999999999999999 99874322222 33344444555556666
Q ss_pred HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHH---HHHHhHhccCCChhhHHHHHHHcccCCch
Q psy4974 174 LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVR---VFEGMRRLSNWSPMARSEVLKAYDNDVNY 250 (345)
Q Consensus 174 ~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
..+.+.|.++|.||||.+|+.+|.++| ++++|.++++......... .....+..........+.+.+.+..-
T Consensus 81 ~~gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~--- 155 (243)
T COG1647 81 EAGYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSY--- 155 (243)
T ss_pred HcCCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHh---
Confidence 668889999999999999999999998 9999999987663322211 11111222222211122211111110
Q ss_pred hhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC--CcEEEEeCCCCCcccc-cC
Q psy4974 251 ITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCHI-KH 327 (345)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-~~ 327 (345)
...+......+..+++. ....+..|..|++++.|.+|+++|.+.+..+.+.+. +.++.+++++||.+-. ++
T Consensus 156 -~~~~~~~~~~~~~~i~~-----~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~E 229 (243)
T COG1647 156 -KDTPMTTTAQLKKLIKD-----ARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKE 229 (243)
T ss_pred -hcchHHHHHHHHHHHHH-----HHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchh
Confidence 01111112222222222 245577889999999999999999999999998874 5699999999999877 56
Q ss_pred hHHHHHHHHHHHHh
Q psy4974 328 GQVFNEISRNFILE 341 (345)
Q Consensus 328 ~~~~~~~i~~fl~~ 341 (345)
.+.+.+.+..||+.
T Consensus 230 rd~v~e~V~~FL~~ 243 (243)
T COG1647 230 RDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHHHHHHhhC
Confidence 89999999999963
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.1e-25 Score=227.36 Aligned_cols=243 Identities=19% Similarity=0.255 Sum_probs=162.8
Q ss_pred EEEEEcCC--CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC-----CCC
Q psy4974 84 IRFIKYGS--GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR-----SFV 156 (345)
Q Consensus 84 l~~~~~g~--~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~-----~~~ 156 (345)
++|...|+ ..|+|||+||++++. ..|..++..|.+. |+|+++|+|| ||.|..... ..
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~-~~w~~~~~~L~~~-~rVi~~Dl~G-------------~G~S~~~~~~~~~~~~- 1423 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTG-EDWIPIMKAISGS-ARCISIDLPG-------------HGGSKIQNHAKETQTE- 1423 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCH-HHHHHHHHHHhCC-CEEEEEcCCC-------------CCCCCCcccccccccc-
Confidence 45556664 347999999999995 8999999999876 9999999999 999865421 00
Q ss_pred CccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHh--ccC-C-
Q psy4974 157 PFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRR--LSN-W- 232 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~~-~- 232 (345)
...+++..++++.+++++++.++++|+||||||.+|+.++.++|++|+++|++++.+............... ... .
T Consensus 1424 ~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~ 1503 (1655)
T PLN02980 1424 PTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLI 1503 (1655)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHH
Confidence 122678889999999999999999999999999999999999999999999998765432211111100000 000 0
Q ss_pred ChhhHHHHHHHcccC-------CchhhhhHHHH-----HHHHHHHHHh---hCchhhhccCCCCCCCEEEEEeCCCCCCC
Q psy4974 233 SPMARSEVLKAYDND-------VNYITGIFNQY-----VDMVNLIFKS---YGRNVYQELLPYVDVPVLVFHSADDVMVS 297 (345)
Q Consensus 233 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~ 297 (345)
..........++... ........... ...+...+.. ....+....+.++++|+|+|+|++|.+++
T Consensus 1504 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~ 1583 (1655)
T PLN02980 1504 DHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK 1583 (1655)
T ss_pred hhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH
Confidence 000001111111110 00000000000 0011111111 11223456688999999999999999875
Q ss_pred hHHHHHHHhhcCC------------cEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 298 TQQVQSLLNQLKF------------CQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 298 ~~~~~~~~~~~~~------------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+.++++.+.+++ +++++++++||++++|+|+++++.|.+||.+..
T Consensus 1584 -~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1584 -QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred -HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 566677776665 489999999999999999999999999998754
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.6e-25 Score=199.22 Aligned_cols=252 Identities=14% Similarity=0.196 Sum_probs=151.5
Q ss_pred eeeEEE-cCceEEEE--E-----cCCCCceEEEEcCcCCCchhhH-HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCC
Q psy4974 74 EGFFSI-KGCDIRFI--K-----YGSGAQVLFFTYGVLGEIRNSF-KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSG 144 (345)
Q Consensus 74 ~~~~~~-~g~~l~~~--~-----~g~~~p~vv~lHG~~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~ 144 (345)
...+.. ||..+.+- . ....+|+||++||+++++...| ..++..+.++||+|+++|+||
T Consensus 73 re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG------------- 139 (388)
T PLN02511 73 RECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRG------------- 139 (388)
T ss_pred EEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCC-------------
Confidence 334444 67666542 1 1234578999999988753445 456666767789999999999
Q ss_pred CCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC----ccEEEEEeChhHHHHHHHHHhCCcc--cceeeEeccCCCCCch
Q psy4974 145 YGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGV----CKVSLFGWCDGGHLSFVFSMKYPHM--VHKLVIWGTKSFLTID 218 (345)
Q Consensus 145 ~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~i~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~ 218 (345)
||.|......+ . ....++|+.++++.+.. .+++++||||||.+++.++.++|++ |.++++++++......
T Consensus 140 ~G~s~~~~~~~-~---~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~ 215 (388)
T PLN02511 140 CADSPVTTPQF-Y---SASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIA 215 (388)
T ss_pred CCCCCCCCcCE-E---cCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHH
Confidence 99997543332 1 12335555555555543 5899999999999999999999887 8888888765542111
Q ss_pred hHHHHHHhHhcc-C-CChhhHHHH---HHHcccCCc-h----h--hhhHHHHHHHHHHHH-------HhhCchhhhccCC
Q psy4974 219 NVRVFEGMRRLS-N-WSPMARSEV---LKAYDNDVN-Y----I--TGIFNQYVDMVNLIF-------KSYGRNVYQELLP 279 (345)
Q Consensus 219 ~~~~~~~~~~~~-~-~~~~~~~~~---~~~~~~~~~-~----~--~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~ 279 (345)
............ . ......... ...+..... + . ......+.+.+.... ..+...+....+.
T Consensus 216 ~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~ 295 (388)
T PLN02511 216 DEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIK 295 (388)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhc
Confidence 100000000000 0 000000000 000000000 0 0 001111111111110 0011122345688
Q ss_pred CCCCCEEEEEeCCCCCCChHHH-HHHHhhcCCcEEEEeCCCCCcccccChHH------HHHHHHHHHHhh
Q psy4974 280 YVDVPVLVFHSADDVMVSTQQV-QSLLNQLKFCQYYQFSSGGHSCHIKHGQV------FNEISRNFILEE 342 (345)
Q Consensus 280 ~i~~Pvl~i~G~~D~~v~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~~~~------~~~~i~~fl~~~ 342 (345)
+|++|+|+|+|++|+++|.+.. ....+..+++++++++++||..++|.|+. +.+.+.+||+..
T Consensus 296 ~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 296 HVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred cCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHH
Confidence 8999999999999999997654 45667789999999999999999999876 589999999754
|
|
| >KOG1455|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-24 Score=177.16 Aligned_cols=247 Identities=15% Similarity=0.169 Sum_probs=170.8
Q ss_pred eEEEcCceEEEEEcCC-----CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 76 FFSIKGCDIRFIKYGS-----GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 76 ~~~~~g~~l~~~~~g~-----~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
+...+|..+++..|-+ .+..|+++||+++.+...|..++..|+..||.|+++|++| ||.|+.
T Consensus 32 ~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~G-------------hG~SdG 98 (313)
T KOG1455|consen 32 FTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEG-------------HGRSDG 98 (313)
T ss_pred EEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccC-------------CCcCCC
Confidence 3444899999888743 1237999999998855888999999999999999999999 999985
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCC------ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh-----
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGV------CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN----- 219 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~----- 219 (345)
... .+.+++..++|+...++.... .+.+++||||||.+++.++.+.|+...++|+++|.....+..
T Consensus 99 l~~---yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~ 175 (313)
T KOG1455|consen 99 LHA---YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPP 175 (313)
T ss_pred Ccc---cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcH
Confidence 443 345778889999988886421 389999999999999999999999999999999966543221
Q ss_pred -HHHHHHhHh-ccCCC---------hhhHHH-HHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEE
Q psy4974 220 -VRVFEGMRR-LSNWS---------PMARSE-VLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLV 287 (345)
Q Consensus 220 -~~~~~~~~~-~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~ 287 (345)
......+.. +..|. ...+.. .......++...... -.+.....+++. ..+....+.++++|+++
T Consensus 176 v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~--pRl~T~~ElLr~--~~~le~~l~~vtvPfli 251 (313)
T KOG1455|consen 176 VISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGK--PRLKTAYELLRV--TADLEKNLNEVTVPFLI 251 (313)
T ss_pred HHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCC--ccHHHHHHHHHH--HHHHHHhcccccccEEE
Confidence 111111111 11221 001111 111111111000000 001111111111 12346678899999999
Q ss_pred EEeCCCCCCChHHHHHHHhhcC--CcEEEEeCCCCCcccc----cChHHHHHHHHHHHHhh
Q psy4974 288 FHSADDVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCHI----KHGQVFNEISRNFILEE 342 (345)
Q Consensus 288 i~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~~ 342 (345)
+||++|.++.+..++.+.+..+ +.++++|||+-|..+. |+-+.+...|.+||+++
T Consensus 252 lHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 252 LHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred EecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999999999999874 6799999999999875 34467788899999864
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-24 Score=204.20 Aligned_cols=249 Identities=13% Similarity=0.089 Sum_probs=159.6
Q ss_pred eeeEEEcCceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
..++..+|.+++|...|+. .|+|||+||++++. ..|..+++.|. .||+|+++|+|| ||.|+.+.
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~-~~w~~~~~~L~-~~~~Vi~~D~~G-------------~G~S~~~~ 69 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNH-EVWDGVAPLLA-DRFRVVAYDVRG-------------AGRSSAPK 69 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchH-HHHHHHHHHhh-cceEEEEecCCC-------------CCCCCCCC
Confidence 5566779999999998853 47999999999995 99999999995 469999999999 99997543
Q ss_pred CCCCCccchHHHHHHHHHHHHHhCCcc-EEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCCCCchhHHHHH-----
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLLGVCK-VSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSFLTIDNVRVFE----- 224 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~----- 224 (345)
.. ...+++++++++.+++++++.++ ++|+||||||.+++.++.+. ++++..++.++++.... ......
T Consensus 70 ~~--~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~ 145 (582)
T PRK05855 70 RT--AAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDH--VGFWLRSGLRR 145 (582)
T ss_pred cc--cccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHH--HHHHHhhcccc
Confidence 22 11268889999999999998765 99999999999998887762 34455554444322100 000000
Q ss_pred --------HhHhccC-----------CChh-----hHHHHHHHcccCCchhhhh-H-----HHHHHHHHHHHHhhCchhh
Q psy4974 225 --------GMRRLSN-----------WSPM-----ARSEVLKAYDNDVNYITGI-F-----NQYVDMVNLIFKSYGRNVY 274 (345)
Q Consensus 225 --------~~~~~~~-----------~~~~-----~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~ 274 (345)
....... .... ........+.......... . ...................
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (582)
T PRK05855 146 PTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLS 225 (582)
T ss_pred cchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhc
Confidence 0000000 0000 0000000000000000000 0 0000000000000001111
Q ss_pred hccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 275 QELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 275 ~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
...+..+++|+++|+|++|.++|....+.+.+.+++.++++++ +||+++.|+|+++.+.|.+|+.+.
T Consensus 226 ~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~ 292 (582)
T PRK05855 226 RPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAV 292 (582)
T ss_pred cCccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHhc
Confidence 2234558999999999999999999999998888888888886 799999999999999999999864
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-23 Score=187.32 Aligned_cols=261 Identities=20% Similarity=0.293 Sum_probs=169.9
Q ss_pred EEcCceEEEEEcCC----CCceEEEEcCcCCCchh------------hHHHHH---HhhCCCCeEEEEeCCCCchhhhcc
Q psy4974 78 SIKGCDIRFIKYGS----GAQVLFFTYGVLGEIRN------------SFKKQL---TAFDPKLFTSIFWDPPGNVVLYLL 138 (345)
Q Consensus 78 ~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~------------~~~~~~---~~L~~~G~~vi~~D~~G~~~~~~~ 138 (345)
.+...+|.|..+|. +.++||++|++.++++. -|..++ ..|..+-|.||++|..|++..+.-
T Consensus 37 ~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p 116 (389)
T PRK06765 37 TIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDP 116 (389)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCC
Confidence 45778999999985 23699999999886321 266665 235444599999999993322111
Q ss_pred --CCc---c--CCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEE-EEEeChhHHHHHHHHHhCCcccceeeEec
Q psy4974 139 --GKT---C--SGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVS-LFGWCDGGHLSFVFSMKYPHMVHKLVIWG 210 (345)
Q Consensus 139 --g~~---~--~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 210 (345)
|.| + +++|.+... .+ +..++.++++++.+++++++++++. ++||||||++|+.+|.++|++|+++|+++
T Consensus 117 ~~g~tgp~s~~p~tg~~~~~--~f-P~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia 193 (389)
T PRK06765 117 NVITTGPASINPKTGKPYGM--DF-PVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVI 193 (389)
T ss_pred CCCCCCCCCCCcCCCCccCC--CC-CcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEe
Confidence 111 1 222322111 24 4458899999999999999999987 99999999999999999999999999998
Q ss_pred cCCCCCchh-HHHHHH----hHhccCCC---------h-h----hH----------HHHHHHcccCC--chh-------h
Q psy4974 211 TKSFLTIDN-VRVFEG----MRRLSNWS---------P-M----AR----------SEVLKAYDNDV--NYI-------T 252 (345)
Q Consensus 211 ~~~~~~~~~-~~~~~~----~~~~~~~~---------~-~----~~----------~~~~~~~~~~~--~~~-------~ 252 (345)
+........ ...... +..-..|. + . .+ ..+...+.... ... .
T Consensus 194 ~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~ 273 (389)
T PRK06765 194 GNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTL 273 (389)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccch
Confidence 876654433 222221 11111110 0 0 00 00111111100 000 0
Q ss_pred hhHHHHHHHH-------------HHHHHhhCc-------hhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC---
Q psy4974 253 GIFNQYVDMV-------------NLIFKSYGR-------NVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK--- 309 (345)
Q Consensus 253 ~~~~~~~~~~-------------~~~~~~~~~-------~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~--- 309 (345)
...+.++... ..+.+.... .+..+.+.++++|+|+|+|+.|.++|++..+.+.+.++
T Consensus 274 ~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~ 353 (389)
T PRK06765 274 TSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQG 353 (389)
T ss_pred hhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcC
Confidence 0111221111 111111111 13456678899999999999999999999999998886
Q ss_pred -CcEEEEeCC-CCCcccccChHHHHHHHHHHHHh
Q psy4974 310 -FCQYYQFSS-GGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 310 -~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+++++++++ +||..++++|+++++.|.+||++
T Consensus 354 ~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 354 KYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 689999985 89999999999999999999975
|
|
| >KOG2382|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=178.04 Aligned_cols=232 Identities=16% Similarity=0.188 Sum_probs=167.4
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
..|+++++||+.|+. ..|+.+...|+.. |..|+++|.|. ||.|.... ..+..++++++..
T Consensus 51 ~~Pp~i~lHGl~GS~-~Nw~sv~k~Ls~~l~~~v~~vd~Rn-------------HG~Sp~~~-----~h~~~~ma~dv~~ 111 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSK-ENWRSVAKNLSRKLGRDVYAVDVRN-------------HGSSPKIT-----VHNYEAMAEDVKL 111 (315)
T ss_pred CCCceEEecccccCC-CCHHHHHHHhcccccCceEEEeccc-------------CCCCcccc-----ccCHHHHHHHHHH
Confidence 448999999999995 9999999999876 78999999999 99996542 2257888999999
Q ss_pred HHHHhC----CccEEEEEeChhH-HHHHHHHHhCCcccceeeEeccCCC-CCc---hhHHHHHHhHhccCC---Chhh--
Q psy4974 171 LLKLLG----VCKVSLFGWCDGG-HLSFVFSMKYPHMVHKLVIWGTKSF-LTI---DNVRVFEGMRRLSNW---SPMA-- 236 (345)
Q Consensus 171 ~l~~~~----~~~i~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~-~~~---~~~~~~~~~~~~~~~---~~~~-- 236 (345)
+++..+ ..+++++|||||| .+++..+...|+.+..+|+++-.+. ... .....+..+...... ....
T Consensus 112 Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke 191 (315)
T KOG2382|consen 112 FIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKE 191 (315)
T ss_pred HHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHH
Confidence 999874 5699999999999 7888888889999999999986553 221 222333333333222 1111
Q ss_pred --------------HHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccC--CCCCCCEEEEEeCCCCCCChHH
Q psy4974 237 --------------RSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELL--PYVDVPVLVFHSADDVMVSTQQ 300 (345)
Q Consensus 237 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~Pvl~i~G~~D~~v~~~~ 300 (345)
.+.+...+.+...-....|.-....+...+..+....++..+ .....||+++.|.++..++.+.
T Consensus 192 ~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~ 271 (315)
T KOG2382|consen 192 ALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEH 271 (315)
T ss_pred HHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhH
Confidence 111112222111011222223334444444443222233333 5567899999999999999999
Q ss_pred HHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 301 VQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
...+.+.+|++++..++++||++|.|+|+.+.+.|.+|+.+.
T Consensus 272 ~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 272 YPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred HHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999998764
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=7e-23 Score=175.38 Aligned_cols=224 Identities=15% Similarity=0.178 Sum_probs=143.4
Q ss_pred eeeEEE-cCceEEEEEcCC------CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCC-
Q psy4974 74 EGFFSI-KGCDIRFIKYGS------GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGY- 145 (345)
Q Consensus 74 ~~~~~~-~g~~l~~~~~g~------~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~- 145 (345)
.+.+.. +|..|+-....+ ..++||++||+++. ...+..+++.|+++||.|+.+|.+| +
T Consensus 11 ~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~-~~~~~~~A~~La~~G~~vLrfD~rg-------------~~ 76 (307)
T PRK13604 11 DHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARR-MDHFAGLAEYLSSNGFHVIRYDSLH-------------HV 76 (307)
T ss_pred hheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCC-hHHHHHHHHHHHHCCCEEEEecCCC-------------CC
Confidence 455555 788887544322 22689999999998 4779999999999999999999998 8
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHH
Q psy4974 146 GQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEG 225 (345)
Q Consensus 146 G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 225 (345)
|.|+..-..+ +......++..+.++++..+.+++.|+||||||.+|+..|... .++++|+.+|..............
T Consensus 77 GeS~G~~~~~-t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~ 153 (307)
T PRK13604 77 GLSSGTIDEF-TMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGY 153 (307)
T ss_pred CCCCCccccC-cccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhc
Confidence 8886554444 3334444555556666666677999999999999997777643 399999999987754222211110
Q ss_pred hHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHh--hCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHH
Q psy4974 226 MRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKS--YGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQS 303 (345)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~ 303 (345)
....++......... +... .+. ...+. ...+.. .......+...++++|+|+|||++|.+||.+.++.
T Consensus 154 --~~~~~p~~~lp~~~d-~~g~--~l~--~~~f~---~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~ 223 (307)
T PRK13604 154 --DYLSLPIDELPEDLD-FEGH--NLG--SEVFV---TDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVID 223 (307)
T ss_pred --ccccCcccccccccc-cccc--ccc--HHHHH---HHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHH
Confidence 000000000000000 0000 000 00111 111100 00112234456678999999999999999999999
Q ss_pred HHhhcC--CcEEEEeCCCCCccc
Q psy4974 304 LLNQLK--FCQYYQFSSGGHSCH 324 (345)
Q Consensus 304 ~~~~~~--~~~~~~~~~~gH~~~ 324 (345)
+.+.++ ++++++++|++|.+.
T Consensus 224 l~e~~~s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 224 LLDSIRSEQCKLYSLIGSSHDLG 246 (307)
T ss_pred HHHHhccCCcEEEEeCCCccccC
Confidence 999875 689999999999876
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.9e-23 Score=182.85 Aligned_cols=243 Identities=14% Similarity=0.147 Sum_probs=156.3
Q ss_pred EcCceEEEEEcCC--CCceEEEEcCcCCCchhhH-------------------------HHHHHhhCCCCeEEEEeCCCC
Q psy4974 79 IKGCDIRFIKYGS--GAQVLFFTYGVLGEIRNSF-------------------------KKQLTAFDPKLFTSIFWDPPG 131 (345)
Q Consensus 79 ~~g~~l~~~~~g~--~~p~vv~lHG~~~~~~~~~-------------------------~~~~~~L~~~G~~vi~~D~~G 131 (345)
.+|..|++..+.. .+.+|+++||++++....| ..+++.|.++||.|+++|+||
T Consensus 5 ~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rG 84 (332)
T TIGR01607 5 KDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQG 84 (332)
T ss_pred CCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccc
Confidence 4788898888753 3358999999998853222 467899999999999999999
Q ss_pred chhhhccCCccCCCCCCCCCCC-CCCCccchHHHHHHHHHHHHHhC------------------------CccEEEEEeC
Q psy4974 132 NVVLYLLGKTCSGYGQSLPKGR-SFVPFQYIEEDVDIAYELLKLLG------------------------VCKVSLFGWC 186 (345)
Q Consensus 132 ~~~~~~~g~~~~~~G~s~~~~~-~~~~~~~~~~~~~~~~~~l~~~~------------------------~~~i~lvGhS 186 (345)
||.|..... .. ...++++.++|+.++++.+. ..|++|+|||
T Consensus 85 -------------HG~S~~~~~~~g-~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhS 150 (332)
T TIGR01607 85 -------------HGESDGLQNLRG-HINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLS 150 (332)
T ss_pred -------------cCCCcccccccc-chhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeecc
Confidence 999875422 11 23578888888888887642 2479999999
Q ss_pred hhHHHHHHHHHhCCc--------ccceeeEeccCCCCCch-----------hHHHHHHhHhc-cCCC--h---h-hHHHH
Q psy4974 187 DGGHLSFVFSMKYPH--------MVHKLVIWGTKSFLTID-----------NVRVFEGMRRL-SNWS--P---M-ARSEV 240 (345)
Q Consensus 187 ~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~-----------~~~~~~~~~~~-~~~~--~---~-~~~~~ 240 (345)
|||.+++.++..++. .++++|+++|....... .......+... .... . . .....
T Consensus 151 mGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 230 (332)
T TIGR01607 151 MGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYV 230 (332)
T ss_pred CccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhh
Confidence 999999999876542 58999988886432110 00111111111 0000 0 0 00011
Q ss_pred HHHcccCCchhh-hhHHHHHHHHHHHHHhhCchhhhccCCCC--CCCEEEEEeCCCCCCChHHHHHHHhhc--CCcEEEE
Q psy4974 241 LKAYDNDVNYIT-GIFNQYVDMVNLIFKSYGRNVYQELLPYV--DVPVLVFHSADDVMVSTQQVQSLLNQL--KFCQYYQ 315 (345)
Q Consensus 241 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvl~i~G~~D~~v~~~~~~~~~~~~--~~~~~~~ 315 (345)
...+..++.... .....+...+....... ...+..+ ++|+|+++|++|.+++.+.++.+.+.. ++.++++
T Consensus 231 ~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~-----~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~ 305 (332)
T TIGR01607 231 NDIIKFDKFRYDGGITFNLASELIKATDTL-----DCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHT 305 (332)
T ss_pred hhHHhcCccccCCcccHHHHHHHHHHHHHH-----HhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEE
Confidence 122222211111 11112222222221111 1123334 789999999999999999999888765 4689999
Q ss_pred eCCCCCcccccC-hHHHHHHHHHHHH
Q psy4974 316 FSSGGHSCHIKH-GQVFNEISRNFIL 340 (345)
Q Consensus 316 ~~~~gH~~~~~~-~~~~~~~i~~fl~ 340 (345)
+++++|.++.|. ++++.+.|.+||+
T Consensus 306 ~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 306 LEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred ECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 999999999874 6899999999986
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=5e-22 Score=181.19 Aligned_cols=215 Identities=10% Similarity=0.032 Sum_probs=140.3
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|+||++||+.+.....|..+++.|+++||.|+++|+|| +|.|....... ........+.+++.
T Consensus 195 P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG-------------~G~s~~~~~~~----d~~~~~~avld~l~ 257 (414)
T PRK05077 195 PTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPS-------------VGFSSKWKLTQ----DSSLLHQAVLNALP 257 (414)
T ss_pred cEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCC-------------CCCCCCCCccc----cHHHHHHHHHHHHH
Confidence 55555555544422578888899999999999999999 99985432111 23334455666665
Q ss_pred Hh---CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCch
Q psy4974 174 LL---GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNY 250 (345)
Q Consensus 174 ~~---~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
.. +.+++.++|||+||++|+.+|..+|++|+++|++++.............. ........+...+...
T Consensus 258 ~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~------~p~~~~~~la~~lg~~--- 328 (414)
T PRK05077 258 NVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQ------VPEMYLDVLASRLGMH--- 328 (414)
T ss_pred hCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhh------chHHHHHHHHHHhCCC---
Confidence 54 45789999999999999999999999999999999875321111111110 0001111111111111
Q ss_pred hhhhHHHHHHHHHHHHHhhCchhhhccC-CCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChH
Q psy4974 251 ITGIFNQYVDMVNLIFKSYGRNVYQELL-PYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQ 329 (345)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 329 (345)
.......... +..+... ....+ .++++|+|+|+|++|.++|.+.++.+.+..++.++++++++ ++.+.++
T Consensus 329 -~~~~~~l~~~----l~~~sl~-~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~ 399 (414)
T PRK05077 329 -DASDEALRVE----LNRYSLK-VQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFD 399 (414)
T ss_pred -CCChHHHHHH----hhhccch-hhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHH
Confidence 0011111111 1111100 01112 56899999999999999999999999999999999999976 4557899
Q ss_pred HHHHHHHHHHHhhc
Q psy4974 330 VFNEISRNFILEEN 343 (345)
Q Consensus 330 ~~~~~i~~fl~~~~ 343 (345)
++.+.+.+||+++.
T Consensus 400 ~~~~~i~~wL~~~l 413 (414)
T PRK05077 400 KALQEISDWLEDRL 413 (414)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998753
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=173.90 Aligned_cols=236 Identities=15% Similarity=0.186 Sum_probs=140.5
Q ss_pred CceEEEEcCcCCCchh-hHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC-CCCCCCccchHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRN-SFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK-GRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~-~~~~~~~~~~~~~~~~~~~ 170 (345)
+|+||++||++++... .+..+++.|.++||+|+++|+|| ||.+... ...+ .....++....+..
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG-------------~g~~~~~~~~~~-~~~~~~D~~~~i~~ 123 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRG-------------CSGEPNRLHRIY-HSGETEDARFFLRW 123 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCC-------------CCCCccCCcceE-CCCchHHHHHHHHH
Confidence 4799999999887423 34568889999999999999999 9877432 2222 22223333333333
Q ss_pred HHHHhCCccEEEEEeChhHHHHHHHHHhCCcc--cceeeEeccCCCCCchhHHHHHHhHhcc-C-CChhhHHHHHH---H
Q psy4974 171 LLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHM--VHKLVIWGTKSFLTIDNVRVFEGMRRLS-N-WSPMARSEVLK---A 243 (345)
Q Consensus 171 ~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~---~ 243 (345)
+.+.++..+++++||||||.++..++..+++. +.++|+++++.................. . +.......... .
T Consensus 124 l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 203 (324)
T PRK10985 124 LQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAA 203 (324)
T ss_pred HHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44446667999999999999888888776543 8899999887653221111100000000 0 00000000000 0
Q ss_pred cccCCc----hhh--hhHHHHHHHH-------HHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC
Q psy4974 244 YDNDVN----YIT--GIFNQYVDMV-------NLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF 310 (345)
Q Consensus 244 ~~~~~~----~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~ 310 (345)
+..... ... .....+-+.+ ......+...+....+.++++|+++|+|++|++++.+....+.+..++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~ 283 (324)
T PRK10985 204 YPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPN 283 (324)
T ss_pred ccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCC
Confidence 000000 000 0000000000 001111112223456788999999999999999998888777777788
Q ss_pred cEEEEeCCCCCcccccCh-----HHHHHHHHHHHHhh
Q psy4974 311 CQYYQFSSGGHSCHIKHG-----QVFNEISRNFILEE 342 (345)
Q Consensus 311 ~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~~ 342 (345)
.++.+++++||+.+++.. ....+.+.+|++..
T Consensus 284 ~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 284 VEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred eEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 999999999999998742 35667788888654
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.9e-21 Score=164.38 Aligned_cols=225 Identities=12% Similarity=0.057 Sum_probs=134.3
Q ss_pred CceEEEEcCcCCC---chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGE---IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 93 ~p~vv~lHG~~~~---~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
+++||++||+++. ....|..+++.|+++||.|+++|+|| ||.|.... . ++.+..+++.
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G-------------~G~S~~~~--~----~~~~~~~d~~ 86 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRG-------------MGDSEGEN--L----GFEGIDADIA 86 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCC-------------CCCCCCCC--C----CHHHHHHHHH
Confidence 3578888887642 13457778899999999999999999 99986432 2 3444455555
Q ss_pred HHHHHh-----CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHH-HHHHhHhccCCChhhHHHHHHH
Q psy4974 170 ELLKLL-----GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVR-VFEGMRRLSNWSPMARSEVLKA 243 (345)
Q Consensus 170 ~~l~~~-----~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
+.++.+ +.++++++|||+||.+++.+|.. +++|+++|+++|.......... ............. ......
T Consensus 87 ~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 162 (274)
T TIGR03100 87 AAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSA---DFWRKL 162 (274)
T ss_pred HHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHHHHHhCh---HHHHHh
Confidence 555554 56789999999999999999865 4689999999987542221111 1100000000000 000111
Q ss_pred cccCCchhhhhHHHHHHHHHHHHHh-------hCchhhhccCCCCCCCEEEEEeCCCCCCChHH-----HHHHHhhc--C
Q psy4974 244 YDNDVNYITGIFNQYVDMVNLIFKS-------YGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ-----VQSLLNQL--K 309 (345)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~-----~~~~~~~~--~ 309 (345)
..... -+..........+...... .........+..+++|+++++|..|...+... ...+.+.+ +
T Consensus 163 ~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~ 241 (274)
T TIGR03100 163 LSGEV-NLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDP 241 (274)
T ss_pred cCCCc-cHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcC
Confidence 11110 0000011111110000000 00112234455679999999999998764221 14455544 7
Q ss_pred CcEEEEeCCCCCccccc-ChHHHHHHHHHHHHh
Q psy4974 310 FCQYYQFSSGGHSCHIK-HGQVFNEISRNFILE 341 (345)
Q Consensus 310 ~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 341 (345)
++++..+++++|++..+ .++++.+.|.+||++
T Consensus 242 ~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 242 GIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred CeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 89999999999998555 459999999999963
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-20 Score=160.82 Aligned_cols=214 Identities=14% Similarity=0.131 Sum_probs=129.2
Q ss_pred EEEEEcCC---CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccc
Q psy4974 84 IRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY 160 (345)
Q Consensus 84 l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~ 160 (345)
++|...+. ..|+||++||++++. ..|..++..|+++||.|+++|+|| ||.+....... ....
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g-------------~G~~~~~~~~~-~~~~ 79 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSK-LVYSYFAVALAQAGFRVIMPDAPM-------------HGARFSGDEAR-RLNH 79 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCccc-chHHHHHHHHHhCCCEEEEecCCc-------------ccccCCCcccc-chhh
Confidence 44545432 237999999999884 889999999999999999999999 98763221111 1111
Q ss_pred ----hHHHHHHHHHHHHH------hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc
Q psy4974 161 ----IEEDVDIAYELLKL------LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS 230 (345)
Q Consensus 161 ----~~~~~~~~~~~l~~------~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 230 (345)
..+..+++.++++. ++.++++++|||+||.+++.++.++|+....++++++... . ......
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~---- 150 (249)
T PRK10566 80 FWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-T----SLARTL---- 150 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-H----HHHHHh----
Confidence 11122333333322 2346899999999999999999988864334444433211 0 000000
Q ss_pred CCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCC-CCCEEEEEeCCCCCCChHHHHHHHhhcC
Q psy4974 231 NWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYV-DVPVLVFHSADDVMVSTQQVQSLLNQLK 309 (345)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvl~i~G~~D~~v~~~~~~~~~~~~~ 309 (345)
+.......... ....... .......+....+.++ ++|+|+++|++|.++|.+.++.+.+.++
T Consensus 151 -------------~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~ 213 (249)
T PRK10566 151 -------------FPPLIPETAAQ-QAEFNNI---VAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALR 213 (249)
T ss_pred -------------ccccccccccc-HHHHHHH---HHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHH
Confidence 00000000000 0001111 1111111223334555 6899999999999999999999988774
Q ss_pred ------CcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 310 ------FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 310 ------~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
++++..++++||.+. ....+.+.+||++.
T Consensus 214 ~~g~~~~~~~~~~~~~~H~~~----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 214 ERGLDKNLTCLWEPGVRHRIT----PEALDAGVAFFRQH 248 (249)
T ss_pred hcCCCcceEEEecCCCCCccC----HHHHHHHHHHHHhh
Confidence 257778999999864 34568889998764
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-20 Score=169.03 Aligned_cols=259 Identities=14% Similarity=0.119 Sum_probs=157.8
Q ss_pred CCcceeeeEEE-cCceEEEEEcC--------CCCceEEEEcCcCCCchhhHH------HHHHhhCCCCeEEEEeCCCCch
Q psy4974 69 QDVFTEGFFSI-KGCDIRFIKYG--------SGAQVLFFTYGVLGEIRNSFK------KQLTAFDPKLFTSIFWDPPGNV 133 (345)
Q Consensus 69 ~~~~~~~~~~~-~g~~l~~~~~g--------~~~p~vv~lHG~~~~~~~~~~------~~~~~L~~~G~~vi~~D~~G~~ 133 (345)
+...+++.++. ||..|...... .++|+|+++||+++++ ..|. .++..|+++||+|+++|+||
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss-~~w~~~~~~~sla~~La~~GydV~l~n~RG-- 117 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAG-DAWFLNSPEQSLGFILADHGFDVWVGNVRG-- 117 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccc-cceeecCcccchHHHHHhCCCCcccccccc--
Confidence 44455666655 89888877642 1247999999998885 7763 35567888999999999999
Q ss_pred hhhccCCccCCCCCCCC------CCCCCCCccchHHHH-HHHHHHHHHh---CCccEEEEEeChhHHHHHHHHHhCCc--
Q psy4974 134 VLYLLGKTCSGYGQSLP------KGRSFVPFQYIEEDV-DIAYELLKLL---GVCKVSLFGWCDGGHLSFVFSMKYPH-- 201 (345)
Q Consensus 134 ~~~~~g~~~~~~G~s~~------~~~~~~~~~~~~~~~-~~~~~~l~~~---~~~~i~lvGhS~Gg~ia~~~a~~~p~-- 201 (345)
++.|.. ....+++ -++++.+ .|+.++++.+ ..++++++|||+||.+++.++ .+|+
T Consensus 118 -----------~~~s~gh~~~~~~~~~fw~-~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~ 184 (395)
T PLN02872 118 -----------TRWSYGHVTLSEKDKEFWD-WSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVV 184 (395)
T ss_pred -----------cccccCCCCCCccchhccC-CcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHH
Confidence 664421 1111101 1566666 6777777765 347999999999999998555 5675
Q ss_pred -ccceeeEeccCCCCCchhHHHHHH--------hH-hc--cCC--ChhhHHHHHH---------------HcccCCchhh
Q psy4974 202 -MVHKLVIWGTKSFLTIDNVRVFEG--------MR-RL--SNW--SPMARSEVLK---------------AYDNDVNYIT 252 (345)
Q Consensus 202 -~v~~lvl~~~~~~~~~~~~~~~~~--------~~-~~--~~~--~~~~~~~~~~---------------~~~~~~~~~~ 252 (345)
+|+.+++++|.............. +. .+ ... .......+.. +.+.+..+..
T Consensus 185 ~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~ 264 (395)
T PLN02872 185 EMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNA 264 (395)
T ss_pred HHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccch
Confidence 689999999976543221111100 00 00 000 0000111111 1111100000
Q ss_pred hhHHHH---------HHHHHH---HH----------------HhhC-chhhhccCCCC--CCCEEEEEeCCCCCCChHHH
Q psy4974 253 GIFNQY---------VDMVNL---IF----------------KSYG-RNVYQELLPYV--DVPVLVFHSADDVMVSTQQV 301 (345)
Q Consensus 253 ~~~~~~---------~~~~~~---~~----------------~~~~-~~~~~~~l~~i--~~Pvl~i~G~~D~~v~~~~~ 301 (345)
...... .+.+.. .. ..+. ...+.-.+.++ ++|+++++|++|.+++++..
T Consensus 265 ~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv 344 (395)
T PLN02872 265 SRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDV 344 (395)
T ss_pred hhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHH
Confidence 000000 000000 00 0010 11122345666 57999999999999999999
Q ss_pred HHHHhhcCC-cEEEEeCCCCCcc---cccChHHHHHHHHHHHHhhc
Q psy4974 302 QSLLNQLKF-CQYYQFSSGGHSC---HIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 302 ~~~~~~~~~-~~~~~~~~~gH~~---~~~~~~~~~~~i~~fl~~~~ 343 (345)
+.+.+.+++ .+++.+++++|.. ..+.|+++.+.|.+||++..
T Consensus 345 ~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 345 EHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred HHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 999999987 6888899999963 34789999999999998654
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.87 E-value=6e-21 Score=161.40 Aligned_cols=202 Identities=24% Similarity=0.318 Sum_probs=131.9
Q ss_pred eEEEEeCCCCchhhhccCCccCCCCCCCCC-CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC
Q psy4974 122 FTSIFWDPPGNVVLYLLGKTCSGYGQSLPK-GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP 200 (345)
Q Consensus 122 ~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p 200 (345)
|+|+++|+|| +|.|++. ...+ ...+..+.++++..+++.++.++++++||||||.+++.+|..+|
T Consensus 1 f~vi~~d~rG-------------~g~S~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p 66 (230)
T PF00561_consen 1 FDVILFDLRG-------------FGYSSPHWDPDF-PDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYP 66 (230)
T ss_dssp EEEEEEECTT-------------STTSSSCCGSGS-CTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSG
T ss_pred CEEEEEeCCC-------------CCCCCCCccCCc-ccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCc
Confidence 7899999999 9999840 1222 33478889999999999999999999999999999999999999
Q ss_pred cccceeeEeccCCC----CC-chhHH-HH-HHhHh-ccC-CC---hhhHHHHH---HHcccC--Cchhhh-hHHHHHH--
Q psy4974 201 HMVHKLVIWGTKSF----LT-IDNVR-VF-EGMRR-LSN-WS---PMARSEVL---KAYDND--VNYITG-IFNQYVD-- 260 (345)
Q Consensus 201 ~~v~~lvl~~~~~~----~~-~~~~~-~~-~~~~~-~~~-~~---~~~~~~~~---~~~~~~--~~~~~~-~~~~~~~-- 260 (345)
++|+++|++++... .. ..... .. ..... ... .. ........ ..+... ...... ....+..
T Consensus 67 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (230)
T PF00561_consen 67 ERVKKLVLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFA 146 (230)
T ss_dssp GGEEEEEEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTC
T ss_pred hhhcCcEEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHH
Confidence 99999999999631 00 00000 00 00000 000 00 00000000 000000 000000 0001100
Q ss_pred ---HHHH----HHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHH
Q psy4974 261 ---MVNL----IFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNE 333 (345)
Q Consensus 261 ---~~~~----~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 333 (345)
.... ........+....+.++++|+++++|++|.++|++....+.+.+|+.++++++++||+.++++|+++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~ 226 (230)
T PF00561_consen 147 ETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNE 226 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHH
T ss_pred HHHHHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhh
Confidence 0000 111122223355667899999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q psy4974 334 ISRN 337 (345)
Q Consensus 334 ~i~~ 337 (345)
.|.+
T Consensus 227 ~i~~ 230 (230)
T PF00561_consen 227 IIIK 230 (230)
T ss_dssp HHH-
T ss_pred hhcC
Confidence 8863
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-20 Score=153.23 Aligned_cols=184 Identities=13% Similarity=0.123 Sum_probs=125.0
Q ss_pred ceEEEEcCcCCCchhhHHH--HHHhhCCC--CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKK--QLTAFDPK--LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~--~~~~L~~~--G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
|+||++||++++. ..|.. +.+.|.+. +|+|+++|+|| |+ ++.++.+.
T Consensus 2 p~illlHGf~ss~-~~~~~~~~~~~l~~~~~~~~v~~~dl~g-------------~~---------------~~~~~~l~ 52 (190)
T PRK11071 2 STLLYLHGFNSSP-RSAKATLLKNWLAQHHPDIEMIVPQLPP-------------YP---------------ADAAELLE 52 (190)
T ss_pred CeEEEECCCCCCc-chHHHHHHHHHHHHhCCCCeEEeCCCCC-------------CH---------------HHHHHHHH
Confidence 5899999999995 88874 34556442 59999999999 63 23477888
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCc
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVN 249 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (345)
+++++++.++++++||||||.+|+.+|.++|. .+|+++|+.... ...... ..... ..+....
T Consensus 53 ~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~----~~~~~~---~~~~~-------~~~~~~~- 114 (190)
T PRK11071 53 SLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVRPF----ELLTDY---LGENE-------NPYTGQQ- 114 (190)
T ss_pred HHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCCHH----HHHHHh---cCCcc-------cccCCCc-
Confidence 89999998999999999999999999999983 468888865411 111100 00000 0000000
Q ss_pred hhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChH
Q psy4974 250 YITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQ 329 (345)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 329 (345)
+. ........... . + ...+. .++|+++++|++|+++|.+.+.++.+. ++.++++|++|.+ ...+
T Consensus 115 ~~--~~~~~~~d~~~----~---~-~~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~---~~~~~~~ggdH~f--~~~~ 178 (190)
T PRK11071 115 YV--LESRHIYDLKV----M---Q-IDPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA---CRQTVEEGGNHAF--VGFE 178 (190)
T ss_pred EE--EcHHHHHHHHh----c---C-CccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh---cceEEECCCCcch--hhHH
Confidence 00 00111111111 1 1 11233 678999999999999999999999985 4677889999987 4458
Q ss_pred HHHHHHHHHHH
Q psy4974 330 VFNEISRNFIL 340 (345)
Q Consensus 330 ~~~~~i~~fl~ 340 (345)
++.+.+.+|+.
T Consensus 179 ~~~~~i~~fl~ 189 (190)
T PRK11071 179 RYFNQIVDFLG 189 (190)
T ss_pred HhHHHHHHHhc
Confidence 88999999974
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-19 Score=163.10 Aligned_cols=240 Identities=13% Similarity=0.121 Sum_probs=145.2
Q ss_pred cCceEEEEEcC---CCCceEEEEcCcCCCchhh-----HHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 80 KGCDIRFIKYG---SGAQVLFFTYGVLGEIRNS-----FKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 80 ~g~~l~~~~~g---~~~p~vv~lHG~~~~~~~~-----~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
+...++.+... ..+++||++||+..+. .. ++.+++.|.++||+|+++|++| +|.+..
T Consensus 46 ~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~-~~~d~~~~~~~~~~L~~~G~~V~~~D~~g-------------~g~s~~- 110 (350)
T TIGR01836 46 DKVVLYRYTPVKDNTHKTPLLIVYALVNRP-YMLDLQEDRSLVRGLLERGQDVYLIDWGY-------------PDRADR- 110 (350)
T ss_pred CcEEEEEecCCCCcCCCCcEEEeccccccc-eeccCCCCchHHHHHHHCCCeEEEEeCCC-------------CCHHHh-
Confidence 44555544332 1235899999986553 44 3679999999999999999999 887642
Q ss_pred CCCCCCccchH-H-HHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHH--H----
Q psy4974 152 GRSFVPFQYIE-E-DVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRV--F---- 223 (345)
Q Consensus 152 ~~~~~~~~~~~-~-~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--~---- 223 (345)
.+ +...+. + ..+.+..+.+..+.++++++||||||.+++.++..+|++|+++|+++++.......... .
T Consensus 111 --~~-~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~ 187 (350)
T TIGR01836 111 --YL-TLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHV 187 (350)
T ss_pred --cC-CHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhcccc
Confidence 22 222221 1 22334455566677899999999999999999999999999999999876543221000 0
Q ss_pred ---HHhHhccCCChhhHHHHHHHc---------------------------------ccCCchhhhhHHHHHHHHHHHHH
Q psy4974 224 ---EGMRRLSNWSPMARSEVLKAY---------------------------------DNDVNYITGIFNQYVDMVNLIFK 267 (345)
Q Consensus 224 ---~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 267 (345)
.........+..........+ ..........+.++ +...+.
T Consensus 188 ~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~---~~~~~~ 264 (350)
T TIGR01836 188 DIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQF---VKDFYQ 264 (350)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHH---HHHHHh
Confidence 000000001110000000000 00000000111111 111111
Q ss_pred hhC---ch----hhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC--cEEEEeCCCCCcccccC---hHHHHHHH
Q psy4974 268 SYG---RN----VYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF--CQYYQFSSGGHSCHIKH---GQVFNEIS 335 (345)
Q Consensus 268 ~~~---~~----~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~---~~~~~~~i 335 (345)
... .. .....+.++++|+++++|++|.++|++.++.+.+.++. .++++++ +||..++.+ ++++.+.|
T Consensus 265 ~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i 343 (350)
T TIGR01836 265 QNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAI 343 (350)
T ss_pred cCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHH
Confidence 110 00 01223567899999999999999999999999998863 5667776 899887754 47899999
Q ss_pred HHHHHh
Q psy4974 336 RNFILE 341 (345)
Q Consensus 336 ~~fl~~ 341 (345)
.+||.+
T Consensus 344 ~~wl~~ 349 (350)
T TIGR01836 344 GKWLQA 349 (350)
T ss_pred HHHHHh
Confidence 999976
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-19 Score=141.57 Aligned_cols=142 Identities=22% Similarity=0.313 Sum_probs=112.1
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH-H
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL-K 173 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l-~ 173 (345)
+||++||++++. ..|..+++.|+++||.|+.+|+|+ +|.+. .... ++++.+.+ .
T Consensus 1 ~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~~~~~-------------~~~~~-------~~~~----~~~~~~~~~~ 55 (145)
T PF12695_consen 1 VVVLLHGWGGSR-RDYQPLAEALAEQGYAVVAFDYPG-------------HGDSD-------GADA----VERVLADIRA 55 (145)
T ss_dssp EEEEECTTTTTT-HHHHHHHHHHHHTTEEEEEESCTT-------------STTSH-------HSHH----HHHHHHHHHH
T ss_pred CEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEecCC-------------CCccc-------hhHH----HHHHHHHHHh
Confidence 689999999995 889999999999999999999999 87761 1112 22333222 1
Q ss_pred -HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhh
Q psy4974 174 -LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYIT 252 (345)
Q Consensus 174 -~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (345)
..+.++++++|||+||.+++.++.+. .+++++|++++...
T Consensus 56 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~-------------------------------------- 96 (145)
T PF12695_consen 56 GYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD-------------------------------------- 96 (145)
T ss_dssp HHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESSG--------------------------------------
T ss_pred hcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCccc--------------------------------------
Confidence 23667999999999999999999988 68999999999211
Q ss_pred hhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-CcEEEEeCCCCCc
Q psy4974 253 GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-FCQYYQFSSGGHS 322 (345)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH~ 322 (345)
...+...++|+++++|++|.+++.+..+.+.+.++ +.+++++++++|+
T Consensus 97 ----------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ----------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ----------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ----------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 11133456799999999999999999999988887 5799999999995
|
... |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-18 Score=161.46 Aligned_cols=221 Identities=10% Similarity=0.010 Sum_probs=139.0
Q ss_pred CceEEEEcCcCCCchhhHH-----HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFK-----KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~-----~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
++|||++||+.... ..|. .++++|.++||+|+++|++| +|.+..... + +....+...+.
T Consensus 188 ~~PlLiVp~~i~k~-yilDL~p~~Slv~~L~~qGf~V~~iDwrg-------------pg~s~~~~~-~-ddY~~~~i~~a 251 (532)
T TIGR01838 188 KTPLLIVPPWINKY-YILDLRPQNSLVRWLVEQGHTVFVISWRN-------------PDASQADKT-F-DDYIRDGVIAA 251 (532)
T ss_pred CCcEEEECcccccc-eeeecccchHHHHHHHHCCcEEEEEECCC-------------CCcccccCC-h-hhhHHHHHHHH
Confidence 47999999998774 7774 79999999999999999999 998743321 1 11122334566
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHH----HHHHhC-CcccceeeEeccCCCCCchhHH----------HHH-HhHhccC
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSF----VFSMKY-PHMVHKLVIWGTKSFLTIDNVR----------VFE-GMRRLSN 231 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~~----------~~~-~~~~~~~ 231 (345)
+..+.+..+.++++++||||||.++. .+++.. +++|++++++++...+...... ..+ .+.....
T Consensus 252 l~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~ 331 (532)
T TIGR01838 252 LEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGY 331 (532)
T ss_pred HHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCC
Confidence 66777778889999999999999852 245554 7789999999987664422110 011 1111111
Q ss_pred CChhhHHHHHHHcccC--------------CchhhhhHHHH------------HHHHHHHHHhhC-------chhhhccC
Q psy4974 232 WSPMARSEVLKAYDND--------------VNYITGIFNQY------------VDMVNLIFKSYG-------RNVYQELL 278 (345)
Q Consensus 232 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~------------~~~~~~~~~~~~-------~~~~~~~l 278 (345)
...........++... ..........| .+.+..++.... .......+
T Consensus 332 lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL 411 (532)
T TIGR01838 332 LDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDL 411 (532)
T ss_pred CCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecch
Confidence 1111111111111110 00000000111 111222221111 11224567
Q ss_pred CCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChH
Q psy4974 279 PYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQ 329 (345)
Q Consensus 279 ~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 329 (345)
.+|++|+++++|++|.++|.+.+..+.+.+++.+..+++++||..++++|.
T Consensus 412 ~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 412 SKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred hhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 789999999999999999999999999999998999999999999988764
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=6e-18 Score=145.04 Aligned_cols=239 Identities=18% Similarity=0.257 Sum_probs=149.6
Q ss_pred cCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhC---CCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 80 KGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFD---PKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 80 ~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~---~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
.+..+.|...+...|+++++||++++. ..|......+. .. |+++++|+|| ||.|. .. .+
T Consensus 8 ~~~~~~~~~~~~~~~~i~~~hg~~~~~-~~~~~~~~~~~~~~~~-~~~~~~d~~g-------------~g~s~-~~-~~- 69 (282)
T COG0596 8 DGVRLAYREAGGGGPPLVLLHGFPGSS-SVWRPVFKVLPALAAR-YRVIAPDLRG-------------HGRSD-PA-GY- 69 (282)
T ss_pred CCeEEEEeecCCCCCeEEEeCCCCCch-hhhHHHHHHhhccccc-eEEEEecccC-------------CCCCC-cc-cc-
Confidence 445566666655456999999999994 77777333332 24 9999999999 99996 11 12
Q ss_pred CccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCC-----------chhHHHHHH
Q psy4974 157 PFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLT-----------IDNVRVFEG 225 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-----------~~~~~~~~~ 225 (345)
.....++++..+++.++..+++++|||+||.+++.++.++|++++++|++++..... .........
T Consensus 70 ---~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (282)
T COG0596 70 ---SLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALAD 146 (282)
T ss_pred ---cHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhh
Confidence 233348889999999998899999999999999999999999999999999765410 000000000
Q ss_pred hHhccCCChhhHHHHHHH--cccC--------Cchhh-hhHHHH---HHHHH-----HHHHhhCchhhhccCCCCCCCEE
Q psy4974 226 MRRLSNWSPMARSEVLKA--YDND--------VNYIT-GIFNQY---VDMVN-----LIFKSYGRNVYQELLPYVDVPVL 286 (345)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~--~~~~--------~~~~~-~~~~~~---~~~~~-----~~~~~~~~~~~~~~l~~i~~Pvl 286 (345)
...... ........... .... ..... ...... ..... ..............+..+++|++
T Consensus 147 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 225 (282)
T COG0596 147 LLLGLD-AAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTL 225 (282)
T ss_pred hhhccc-hhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeE
Confidence 000000 00000000000 0000 00000 000000 00000 00000000012344567789999
Q ss_pred EEEeCCCCCCChHHHHHHHhhcCC-cEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 287 VFHSADDVMVSTQQVQSLLNQLKF-CQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 287 ~i~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
+++|++|.+.|......+.+..++ .++.+++++||+.+.++|+.+.+.+.+|+.
T Consensus 226 ~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 226 IIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred EEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 999999977776666777777775 899999999999999999999999988543
|
|
| >KOG1552|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-18 Score=142.16 Aligned_cols=190 Identities=18% Similarity=0.221 Sum_probs=138.4
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
.+++++.||.... ......+...|..+ +++|+++|++| +|.|...+.+. ...++++.+.++
T Consensus 60 ~~~lly~hGNa~D-lgq~~~~~~~l~~~ln~nv~~~DYSG-------------yG~S~G~psE~----n~y~Di~avye~ 121 (258)
T KOG1552|consen 60 HPTLLYSHGNAAD-LGQMVELFKELSIFLNCNVVSYDYSG-------------YGRSSGKPSER----NLYADIKAVYEW 121 (258)
T ss_pred ceEEEEcCCcccc-hHHHHHHHHHHhhcccceEEEEeccc-------------ccccCCCcccc----cchhhHHHHHHH
Confidence 3799999999666 34444555556552 59999999999 99998766544 455556666666
Q ss_pred HHHhC--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCc
Q psy4974 172 LKLLG--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVN 249 (345)
Q Consensus 172 l~~~~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (345)
+++-. .++++|+|+|+|...++.+|.+.| +.++||.+|........ +...
T Consensus 122 Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~------------------------~~~~-- 173 (258)
T KOG1552|consen 122 LRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVA------------------------FPDT-- 173 (258)
T ss_pred HHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhh------------------------ccCc--
Confidence 66543 579999999999999999999998 99999999965521100 0000
Q ss_pred hhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCc-EEEEeCCCCCcccccCh
Q psy4974 250 YITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFC-QYYQFSSGGHSCHIKHG 328 (345)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~ 328 (345)
... . + .+.....+..+.++||+|++||++|.+++.....++.+..++. +-.++.|+||.-. +..
T Consensus 174 ~~~-~---~----------~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~-~~~ 238 (258)
T KOG1552|consen 174 KTT-Y---C----------FDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDI-ELY 238 (258)
T ss_pred ceE-E---e----------eccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCccc-ccC
Confidence 000 0 0 0001115567788999999999999999999999999999764 7778889999866 556
Q ss_pred HHHHHHHHHHHHhhc
Q psy4974 329 QVFNEISRNFILEEN 343 (345)
Q Consensus 329 ~~~~~~i~~fl~~~~ 343 (345)
.++.+.+.+|+....
T Consensus 239 ~~yi~~l~~f~~~~~ 253 (258)
T KOG1552|consen 239 PEYIEHLRRFISSVL 253 (258)
T ss_pred HHHHHHHHHHHHHhc
Confidence 677788888887543
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=7e-18 Score=170.53 Aligned_cols=231 Identities=10% Similarity=0.091 Sum_probs=142.3
Q ss_pred CceEEEEcCcCCCchhhHHHH-----HHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQ-----LTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~-----~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
.+||||+||++.+. ..|+.. ++.|.++||+|+++|+ | .++.+...+ ..++.+++..
T Consensus 67 ~~plllvhg~~~~~-~~~d~~~~~s~v~~L~~~g~~v~~~d~-G---------------~~~~~~~~~--~~~l~~~i~~ 127 (994)
T PRK07868 67 GPPVLMVHPMMMSA-DMWDVTRDDGAVGILHRAGLDPWVIDF-G---------------SPDKVEGGM--ERNLADHVVA 127 (994)
T ss_pred CCcEEEECCCCCCc-cceecCCcccHHHHHHHCCCEEEEEcC-C---------------CCChhHcCc--cCCHHHHHHH
Confidence 37999999999985 999864 7889899999999995 3 343332211 1255566655
Q ss_pred HHHHHHH---hCCccEEEEEeChhHHHHHHHHHhC-CcccceeeEeccCCCCCch---h-H-HH-H-------HHhHhcc
Q psy4974 168 AYELLKL---LGVCKVSLFGWCDGGHLSFVFSMKY-PHMVHKLVIWGTKSFLTID---N-V-RV-F-------EGMRRLS 230 (345)
Q Consensus 168 ~~~~l~~---~~~~~i~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~---~-~-~~-~-------~~~~~~~ 230 (345)
+.+.++. ...++++++||||||.+++.+++.+ +++|+++|+++++...... . . .. . ..+....
T Consensus 128 l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (994)
T PRK07868 128 LSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRL 207 (994)
T ss_pred HHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcC
Confidence 5555543 3446899999999999999988755 5689999998876432211 0 0 00 0 0000000
Q ss_pred CCChhh-------------HH---HHHHHcccCCchhh--hhHHH------H--------HHHHHHHHHhhCc----hhh
Q psy4974 231 NWSPMA-------------RS---EVLKAYDNDVNYIT--GIFNQ------Y--------VDMVNLIFKSYGR----NVY 274 (345)
Q Consensus 231 ~~~~~~-------------~~---~~~~~~~~~~~~~~--~~~~~------~--------~~~~~~~~~~~~~----~~~ 274 (345)
..+... .. .+.+.+.... +.. ...+. | .+.+..++..... ...
T Consensus 208 ~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~-~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~ 286 (994)
T PRK07868 208 DIPGWMARTGFQMLDPVKTAKARVDFLRQLHDRE-ALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAI 286 (994)
T ss_pred CCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchh-hhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEE
Confidence 000000 00 0011111110 100 00000 1 1111122111000 011
Q ss_pred ---hccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEE-EEeCCCCCcccc---cChHHHHHHHHHHHHhhc
Q psy4974 275 ---QELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQY-YQFSSGGHSCHI---KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 275 ---~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---~~~~~~~~~i~~fl~~~~ 343 (345)
...+.++++|+|+|+|++|.++|++..+.+.+.+++.++ .+++++||+.++ ..++++...|.+||.++.
T Consensus 287 ~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 287 NGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred CCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 124789999999999999999999999999999999887 677899999877 457889999999998764
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-16 Score=130.47 Aligned_cols=216 Identities=17% Similarity=0.161 Sum_probs=153.0
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
++.++++|-.||++ ..|+.+...|... +.++++++|| +|..-... ...+++++++.+...+
T Consensus 7 ~~~L~cfP~AGGsa-~~fr~W~~~lp~~-iel~avqlPG-------------R~~r~~ep----~~~di~~Lad~la~el 67 (244)
T COG3208 7 RLRLFCFPHAGGSA-SLFRSWSRRLPAD-IELLAVQLPG-------------RGDRFGEP----LLTDIESLADELANEL 67 (244)
T ss_pred CceEEEecCCCCCH-HHHHHHHhhCCch-hheeeecCCC-------------cccccCCc----ccccHHHHHHHHHHHh
Confidence 35799999999996 9999999999887 9999999999 77653322 3447888888888776
Q ss_pred H-HhCCccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCCCCc--------hhHHHHHHhHhccCCChhhHHHH
Q psy4974 173 K-LLGVCKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSFLTI--------DNVRVFEGMRRLSNWSPMARSEV 240 (345)
Q Consensus 173 ~-~~~~~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
. -..-+++.++||||||++|.++|.+.. ..+.++++.+..+.... ........+..+...++...
T Consensus 68 ~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~l--- 144 (244)
T COG3208 68 LPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELL--- 144 (244)
T ss_pred ccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHh---
Confidence 6 344468999999999999999998742 22667777766444111 11122222222222211110
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-CcEEEEeCCC
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-FCQYYQFSSG 319 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~ 319 (345)
.-.+...-.+..+++-+.....+.+... ..++||+.++.|++|..+..+....|.+... ..++.+++ +
T Consensus 145 ---------ed~El~~l~LPilRAD~~~~e~Y~~~~~-~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-G 213 (244)
T COG3208 145 ---------EDPELMALFLPILRADFRALESYRYPPP-APLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-G 213 (244)
T ss_pred ---------cCHHHHHHHHHHHHHHHHHhcccccCCC-CCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-C
Confidence 0122233344555555555555544444 5689999999999999999999999998876 67999997 8
Q ss_pred CCcccccChHHHHHHHHHHHHh
Q psy4974 320 GHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 320 gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
||+...++.+++.+.|.+.+..
T Consensus 214 gHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 214 GHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred cceehhhhHHHHHHHHHHHhhh
Confidence 9999999999999999998853
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=139.82 Aligned_cols=182 Identities=13% Similarity=0.115 Sum_probs=115.9
Q ss_pred CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCC--C--CCCCCCCCccchHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS--L--PKGRSFVPFQYIEEDVD 166 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s--~--~~~~~~~~~~~~~~~~~ 166 (345)
+..|+||++||++++. ..|..+++.|.+.++.+..++++|.... +.. -|.+ + ...... ....+.+..+
T Consensus 14 ~~~~~vIlLHG~G~~~-~~~~~l~~~l~~~~~~~~~i~~~g~~~~---~~~---~g~~W~~~~~~~~~~-~~~~~~~~~~ 85 (232)
T PRK11460 14 PAQQLLLLFHGVGDNP-VAMGEIGSWFAPAFPDALVVSVGGPEPS---GNG---AGRQWFSVQGITEDN-RQARVAAIMP 85 (232)
T ss_pred CCCcEEEEEeCCCCCh-HHHHHHHHHHHHHCCCCEEECCCCCCCc---CCC---CCcccccCCCCCccc-hHHHHHHHHH
Confidence 3457999999999995 9999999999876555555555551000 000 0100 0 000000 1112223333
Q ss_pred HHHHHH----HHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHH
Q psy4974 167 IAYELL----KLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEV 240 (345)
Q Consensus 167 ~~~~~l----~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
.+.+++ +..++ ++++++|||+||.+++.++.++|+.+.+++.+++.....
T Consensus 86 ~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~------------------------ 141 (232)
T PRK11460 86 TFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL------------------------ 141 (232)
T ss_pred HHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc------------------------
Confidence 333333 33343 489999999999999999999988778787765521100
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEEEe
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYYQF 316 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~~~ 316 (345)
. .....+.|++++||++|.++|.+.++++.+.+. +++++++
T Consensus 142 ----~-------------------------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~ 186 (232)
T PRK11460 142 ----P-------------------------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIV 186 (232)
T ss_pred ----c-------------------------------ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 0 001236799999999999999998888887763 4688889
Q ss_pred CCCCCcccccChHHHHHHHHHHH
Q psy4974 317 SSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 317 ~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
+++||.+..+..+.+.+.+.++|
T Consensus 187 ~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 187 EDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHc
Confidence 99999987555555555555554
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.3e-16 Score=135.84 Aligned_cols=255 Identities=18% Similarity=0.307 Sum_probs=168.0
Q ss_pred EEcCceEEEEEcCCC----CceEEEEcCcCCCc--hh--------hHHHHH---HhhCCCCeEEEEeCCCCchhhhccCC
Q psy4974 78 SIKGCDIRFIKYGSG----AQVLFFTYGVLGEI--RN--------SFKKQL---TAFDPKLFTSIFWDPPGNVVLYLLGK 140 (345)
Q Consensus 78 ~~~g~~l~~~~~g~~----~p~vv~lHG~~~~~--~~--------~~~~~~---~~L~~~G~~vi~~D~~G~~~~~~~g~ 140 (345)
.+.+..|.|+.+|+- ...|+++|++.++. .. -|..++ ..+...-|.||++|..|+ |.-
T Consensus 32 ~l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~-----c~G 106 (368)
T COG2021 32 VLSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGG-----CKG 106 (368)
T ss_pred cccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCC-----CCC
Confidence 457889999999852 24899999999852 12 455555 234444599999999991 100
Q ss_pred ccCCCCCCCCCC------CCCCCccchHHHHHHHHHHHHHhCCccEE-EEEeChhHHHHHHHHHhCCcccceeeEeccCC
Q psy4974 141 TCSGYGQSLPKG------RSFVPFQYIEEDVDIAYELLKLLGVCKVS-LFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 141 ~~~~~G~s~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 213 (345)
+ .|.++..+ ..| +.-++.+++..-..+++++|++++. +||-||||+.|+.++..+|++|.++|.+++..
T Consensus 107 S---tgP~s~~p~g~~yg~~F-P~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~ 182 (368)
T COG2021 107 S---TGPSSINPGGKPYGSDF-PVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAA 182 (368)
T ss_pred C---CCCCCcCCCCCccccCC-CcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccc
Confidence 0 11222111 234 5557888888888899999999988 99999999999999999999999999999977
Q ss_pred CCCchhHHHHHHhHh----ccCCC---------h---------------hhHHHHHHHcccCC---chh----hhhHHHH
Q psy4974 214 FLTIDNVRVFEGMRR----LSNWS---------P---------------MARSEVLKAYDNDV---NYI----TGIFNQY 258 (345)
Q Consensus 214 ~~~~~~~~~~~~~~~----~~~~~---------~---------------~~~~~~~~~~~~~~---~~~----~~~~~~~ 258 (345)
........+....+. -..|. + .....+.+.+.... ... ....+.+
T Consensus 183 r~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESY 262 (368)
T COG2021 183 RLSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESY 262 (368)
T ss_pred cCCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHH
Confidence 665554433332222 12221 0 01112222232210 000 0111222
Q ss_pred HHHHH-------------HHHHhhCch-------hhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcE-EEEeC
Q psy4974 259 VDMVN-------------LIFKSYGRN-------VYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQ-YYQFS 317 (345)
Q Consensus 259 ~~~~~-------------~~~~~~~~~-------~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~-~~~~~ 317 (345)
++..- .+.+..+.. +....+.++++|++++.-+.|.+.|++..+.+.+.++.+. +.+++
T Consensus 263 L~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~ 342 (368)
T COG2021 263 LDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREID 342 (368)
T ss_pred HHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEec
Confidence 22111 111111122 2344478899999999999999999999999999998765 66664
Q ss_pred -CCCCcccccChHHHHHHHHHHHHh
Q psy4974 318 -SGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 318 -~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
..||..++.+.+.+...|.+||+.
T Consensus 343 S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 343 SPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred CCCCchhhhcchhhhhHHHHHHhhc
Confidence 579999999899999999999975
|
|
| >KOG2564|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.6e-17 Score=134.23 Aligned_cols=217 Identities=13% Similarity=0.094 Sum_probs=135.8
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCC-CCCCccchHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR-SFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~-~~~~~~~~~~~~~~~~~ 170 (345)
.|.++++||++.+. -.|..++..|... ..+|+++|+|| ||++.-.+. ++ +.+.++.|+.+
T Consensus 74 gpil~l~HG~G~S~-LSfA~~a~el~s~~~~r~~a~DlRg-------------HGeTk~~~e~dl----S~eT~~KD~~~ 135 (343)
T KOG2564|consen 74 GPILLLLHGGGSSA-LSFAIFASELKSKIRCRCLALDLRG-------------HGETKVENEDDL----SLETMSKDFGA 135 (343)
T ss_pred ccEEEEeecCcccc-hhHHHHHHHHHhhcceeEEEeeccc-------------cCccccCChhhc----CHHHHHHHHHH
Confidence 37899999999995 9999999888664 47889999999 999964433 33 67778999999
Q ss_pred HHHHhC---CccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCCCCchhHHHH-HHhHhccCCChhhHHHH----
Q psy4974 171 LLKLLG---VCKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSFLTIDNVRVF-EGMRRLSNWSPMARSEV---- 240 (345)
Q Consensus 171 ~l~~~~---~~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---- 240 (345)
+++.+= ..+|+||||||||.+|.+.|... |. +.+++.++-.-.........+ ..++......+.....+
T Consensus 136 ~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAmeAL~~m~~fL~~rP~~F~Si~~Ai~W~v 214 (343)
T KOG2564|consen 136 VIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAMEALNSMQHFLRNRPKSFKSIEDAIEWHV 214 (343)
T ss_pred HHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHHHHHHHHHHHHhcCCccccchhhHHHHHh
Confidence 988863 34899999999999999877653 54 889999887543211111111 01111000000000000
Q ss_pred ---------------HHHcccCC-----------chhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCC
Q psy4974 241 ---------------LKAYDNDV-----------NYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDV 294 (345)
Q Consensus 241 ---------------~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~ 294 (345)
...+.... ......|..|...+.. .+-..++|-++|.+..|.
T Consensus 215 ~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~------------~Fl~~p~~klLilAg~d~ 282 (343)
T KOG2564|consen 215 RSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSD------------KFLGLPVPKLLILAGVDR 282 (343)
T ss_pred ccccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHHhhhhh------------HhhCCCccceeEEecccc
Confidence 00000000 0112233333333332 233457787888777775
Q ss_pred CCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 295 MVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 295 ~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
.-..- .+-+.-...++.+++.+||+.+.+.|..+++.+..|+.++.
T Consensus 283 LDkdL---tiGQMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 283 LDKDL---TIGQMQGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred cCcce---eeeeeccceeeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 32210 01111124688999999999999999999999999997763
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.7e-16 Score=138.19 Aligned_cols=188 Identities=13% Similarity=0.153 Sum_probs=114.3
Q ss_pred CCceEEEEcCcCCCchhhHHH---HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCC-----C---------------
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKK---QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQ-----S--------------- 148 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~-----s--------------- 148 (345)
+.|+|+++||++++. ..|.. +...+...|+.|+.+|..+ +|. +
T Consensus 46 ~~Pvv~~lHG~~~~~-~~~~~~~~~~~~~~~~g~~Vv~pd~~~-------------~g~~~~~~~~~~~~~~~~~~~~~~ 111 (283)
T PLN02442 46 KVPVLYWLSGLTCTD-ENFIQKSGAQRAAAARGIALVAPDTSP-------------RGLNVEGEADSWDFGVGAGFYLNA 111 (283)
T ss_pred CCCEEEEecCCCcCh-HHHHHhhhHHHHHhhcCeEEEecCCCC-------------CCCCCCCCccccccCCCcceeecc
Confidence 448999999999884 66643 3456677799999999876 431 0
Q ss_pred CCCC-CCCCCc-c-chHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHH
Q psy4974 149 LPKG-RSFVPF-Q-YIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEG 225 (345)
Q Consensus 149 ~~~~-~~~~~~-~-~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 225 (345)
.... ..+ .. . ..++..+.+....+.++.++++++||||||..|+.++.++|+++++++++++..........
T Consensus 112 ~~~~~~~~-~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~---- 186 (283)
T PLN02442 112 TQEKWKNW-RMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWG---- 186 (283)
T ss_pred ccCCCccc-chhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchh----
Confidence 0000 000 00 0 12333344444455567789999999999999999999999999999999987542211000
Q ss_pred hHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH-HHHHH
Q psy4974 226 MRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ-QVQSL 304 (345)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~-~~~~~ 304 (345)
...+...+... ...+. ..........+...++|+++++|++|.+++.. ..+.+
T Consensus 187 -----------~~~~~~~~g~~----~~~~~-----------~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~ 240 (283)
T PLN02442 187 -----------QKAFTNYLGSD----KADWE-----------EYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENF 240 (283)
T ss_pred -----------hHHHHHHcCCC----hhhHH-----------HcChhhhhhhccccCCCEEEEECCCCccccccccHHHH
Confidence 00011111111 00011 11111122334456889999999999998852 23333
Q ss_pred Hhhc----CCcEEEEeCCCCCccc
Q psy4974 305 LNQL----KFCQYYQFSSGGHSCH 324 (345)
Q Consensus 305 ~~~~----~~~~~~~~~~~gH~~~ 324 (345)
.+.+ .++++.++++++|..+
T Consensus 241 ~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 241 EEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred HHHHHHcCCCeEEEEeCCCCccHH
Confidence 3322 3578999999999765
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.5e-16 Score=132.08 Aligned_cols=234 Identities=16% Similarity=0.192 Sum_probs=155.8
Q ss_pred eEEEEEcC-CCC--ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCcc
Q psy4974 83 DIRFIKYG-SGA--QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQ 159 (345)
Q Consensus 83 ~l~~~~~g-~~~--p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~ 159 (345)
+-.|.+.. ++. .+||-+||.+|+ +..|+.+.+.|.+.|++++.+++|| +|.++.+... ..
T Consensus 22 ~a~y~D~~~~gs~~gTVv~~hGsPGS-H~DFkYi~~~l~~~~iR~I~iN~PG-------------f~~t~~~~~~---~~ 84 (297)
T PF06342_consen 22 QAVYEDSLPSGSPLGTVVAFHGSPGS-HNDFKYIRPPLDEAGIRFIGINYPG-------------FGFTPGYPDQ---QY 84 (297)
T ss_pred EEEEEecCCCCCCceeEEEecCCCCC-ccchhhhhhHHHHcCeEEEEeCCCC-------------CCCCCCCccc---cc
Confidence 34455543 333 389999999999 6999999999999999999999999 9999765432 12
Q ss_pred chHHHHHHHHHHHHHhCCc-cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHh---ccCC-Ch
Q psy4974 160 YIEEDVDIAYELLKLLGVC-KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRR---LSNW-SP 234 (345)
Q Consensus 160 ~~~~~~~~~~~~l~~~~~~-~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~---~~~~-~~ 234 (345)
+-++....+.++++.++++ +++++|||.||-.|+.+|..+| ..++++++|+........+.+..+.. +... +.
T Consensus 85 ~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~ 162 (297)
T PF06342_consen 85 TNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPR 162 (297)
T ss_pred ChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhH
Confidence 5567788899999999986 7889999999999999999986 78999999988766544433222221 1111 11
Q ss_pred hhHHHH----HHHcccCCchhhhhHHHHHHHHHHHHHh--hCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc
Q psy4974 235 MARSEV----LKAYDNDVNYITGIFNQYVDMVNLIFKS--YGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL 308 (345)
Q Consensus 235 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~ 308 (345)
.....+ .++++-. -..-+.....++.+... .......+.+.+-++|+++++|.+|.++..+...+.+..+
T Consensus 163 ~~~~~i~~~~y~~iG~K----V~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f 238 (297)
T PF06342_consen 163 FIINAIMYFYYRMIGFK----VSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF 238 (297)
T ss_pred HHHHHHHHHHHHHhCee----ecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh
Confidence 111111 1111111 00012222222222211 1112335556666799999999999998876666654432
Q ss_pred C---------------------------CcEEEEeCCCCCcccccChHHHHHHHHHHH
Q psy4974 309 K---------------------------FCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 309 ~---------------------------~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
. ....+.|.+.||+.+-.+++-+++.+...|
T Consensus 239 ~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 239 KGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMF 296 (297)
T ss_pred CCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhh
Confidence 1 112456777899998888888888887765
|
|
| >KOG4391|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-17 Score=131.48 Aligned_cols=214 Identities=14% Similarity=0.138 Sum_probs=146.3
Q ss_pred cCceEEEEE--cCCCCceEEEEcCcCCCchhhHHHHHHhh-CCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 80 KGCDIRFIK--YGSGAQVLFFTYGVLGEIRNSFKKQLTAF-DPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 80 ~g~~l~~~~--~g~~~p~vv~lHG~~~~~~~~~~~~~~~L-~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
|.+++.... ..+..|+++++|+..|+. ...-+.+..+ ...+.+|+.+++|| +|.|+..+.+-
T Consensus 63 D~vtL~a~~~~~E~S~pTlLyfh~NAGNm-Ghr~~i~~~fy~~l~mnv~ivsYRG-------------YG~S~GspsE~- 127 (300)
T KOG4391|consen 63 DKVTLDAYLMLSESSRPTLLYFHANAGNM-GHRLPIARVFYVNLKMNVLIVSYRG-------------YGKSEGSPSEE- 127 (300)
T ss_pred cceeEeeeeecccCCCceEEEEccCCCcc-cchhhHHHHHHHHcCceEEEEEeec-------------cccCCCCcccc-
Confidence 566665332 334668999999999995 5555555443 33469999999999 99998665432
Q ss_pred CccchHHHHHHHHHHHHHh---CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCC
Q psy4974 157 PFQYIEEDVDIAYELLKLL---GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWS 233 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~---~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (345)
.+.-+++.+.+.+..- ...+++++|.|+||.+|+.+|+++.+++.++|+-++....+........
T Consensus 128 ---GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~--------- 195 (300)
T KOG4391|consen 128 ---GLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVF--------- 195 (300)
T ss_pred ---ceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheec---------
Confidence 3444455555555432 3458999999999999999999999999999999887665332211100
Q ss_pred hhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC--Cc
Q psy4974 234 PMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK--FC 311 (345)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~--~~ 311 (345)
+...+.+..+..+ ..+. . ...+...+.|+|++.|..|.+||+...+++.+.++ ..
T Consensus 196 p~~~k~i~~lc~k-----------------n~~~---S---~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~K 252 (300)
T KOG4391|consen 196 PFPMKYIPLLCYK-----------------NKWL---S---YRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTK 252 (300)
T ss_pred cchhhHHHHHHHH-----------------hhhc---c---hhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhh
Confidence 0000000000000 0000 0 22234567899999999999999999999999987 46
Q ss_pred EEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 312 QYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 312 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
++.+||++.|.--.- -+-..++|.+||.+..+
T Consensus 253 rl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 253 RLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVVK 284 (300)
T ss_pred hheeCCCCccCceEE-eccHHHHHHHHHHHhcc
Confidence 899999999985543 35677899999988764
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.7e-17 Score=135.74 Aligned_cols=197 Identities=17% Similarity=0.192 Sum_probs=117.9
Q ss_pred HHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC--CCCCCCCCccchHHHHHHHHHHHHHh--CCccEEEEEe
Q psy4974 110 FKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL--PKGRSFVPFQYIEEDVDIAYELLKLL--GVCKVSLFGW 185 (345)
Q Consensus 110 ~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~--~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~i~lvGh 185 (345)
|......|+++||.|+.+|+|| ++++|..- ...... ....+++..+.+..+++.. +.+++.++||
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rG----------s~g~g~~~~~~~~~~~-~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~ 71 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRG----------SGGYGKDFHEAGRGDW-GQADVDDVVAAIEYLIKQYYIDPDRIGIMGH 71 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TT----------SSSSHHHHHHTTTTGT-THHHHHHHHHHHHHHHHTTSEEEEEEEEEEE
T ss_pred eeHHHHHHHhCCEEEEEEcCCC----------CCccchhHHHhhhccc-cccchhhHHHHHHHHhccccccceeEEEEcc
Confidence 4456778889999999999999 22222210 011111 1112333333333333332 2358999999
Q ss_pred ChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHH-HHHHHcccCCchhhhhHHHHHHHHHH
Q psy4974 186 CDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS-EVLKAYDNDVNYITGIFNQYVDMVNL 264 (345)
Q Consensus 186 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (345)
|+||++++.++.++|+++++++..++........... . . ... ..... ... .. .. ..+..
T Consensus 72 S~GG~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~~~~--------~--~-~~~~~~~~~-~~~--~~---~~---~~~~~ 131 (213)
T PF00326_consen 72 SYGGYLALLAATQHPDRFKAAVAGAGVSDLFSYYGTT--------D--I-YTKAEYLEY-GDP--WD---NP---EFYRE 131 (213)
T ss_dssp THHHHHHHHHHHHTCCGSSEEEEESE-SSTTCSBHHT--------C--C-HHHGHHHHH-SST--TT---SH---HHHHH
T ss_pred cccccccchhhcccceeeeeeeccceecchhcccccc--------c--c-ccccccccc-Ccc--ch---hh---hhhhh
Confidence 9999999999999999999999999876543222110 0 0 000 00110 000 00 00 00001
Q ss_pred HHHhhCchhhhccCCC--CCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEEEeCCCCCcccc-cChHHHHHHHHH
Q psy4974 265 IFKSYGRNVYQELLPY--VDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYYQFSSGGHSCHI-KHGQVFNEISRN 337 (345)
Q Consensus 265 ~~~~~~~~~~~~~l~~--i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-~~~~~~~~~i~~ 337 (345)
.. ....+.+ +++|+|++||++|..||.+.+..+.+.+. ++++++++++||.+.. +...+..+.+.+
T Consensus 132 ~s-------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~ 204 (213)
T PF00326_consen 132 LS-------PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILD 204 (213)
T ss_dssp HH-------HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHH
T ss_pred hc-------cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHH
Confidence 00 0112223 78999999999999999998888877763 5799999999996553 556688899999
Q ss_pred HHHhhcc
Q psy4974 338 FILEENK 344 (345)
Q Consensus 338 fl~~~~k 344 (345)
||++..|
T Consensus 205 f~~~~l~ 211 (213)
T PF00326_consen 205 FFDKYLK 211 (213)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9998764
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=153.55 Aligned_cols=227 Identities=15% Similarity=0.142 Sum_probs=146.0
Q ss_pred cCceEEEEEcCC-----CC--ceEEEEcCcCCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC--
Q psy4974 80 KGCDIRFIKYGS-----GA--QVLFFTYGVLGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL-- 149 (345)
Q Consensus 80 ~g~~l~~~~~g~-----~~--p~vv~lHG~~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~-- 149 (345)
+|.+++.....+ ++ |+||++||++... ...|....+.|+.+||.|+.+++|| +.|+|..-
T Consensus 374 dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RG----------S~GyG~~F~~ 443 (620)
T COG1506 374 DGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRG----------STGYGREFAD 443 (620)
T ss_pred CCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCC----------CCccHHHHHH
Confidence 788888665432 12 7999999998662 1346777888999999999999999 33344331
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHhCC---ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh
Q psy4974 150 PKGRSFVPFQYIEEDVDIAYELLKLLGV---CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM 226 (345)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 226 (345)
.....+ ....+++..+.+. ++...+. +++.|+|||.||++++..+.+.| .+++.+...+.........
T Consensus 444 ~~~~~~-g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~------ 514 (620)
T COG1506 444 AIRGDW-GGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFG------ 514 (620)
T ss_pred hhhhcc-CCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhcc------
Confidence 112222 2334555555555 5555442 38999999999999999999888 6777776666443211000
Q ss_pred HhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHh
Q psy4974 227 RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLN 306 (345)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~ 306 (345)
......+.......... +. -... +..........++++|+|+|||++|..||.+++.++.+
T Consensus 515 ----~~~~~~~~~~~~~~~~~-------~~-----~~~~---~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~ 575 (620)
T COG1506 515 ----ESTEGLRFDPEENGGGP-------PE-----DREK---YEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVD 575 (620)
T ss_pred ----ccchhhcCCHHHhCCCc-------cc-----ChHH---HHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHH
Confidence 00000000000000000 00 0000 11111234466889999999999999999999999887
Q ss_pred hcC----CcEEEEeCCCCCcccc-cChHHHHHHHHHHHHhhcc
Q psy4974 307 QLK----FCQYYQFSSGGHSCHI-KHGQVFNEISRNFILEENK 344 (345)
Q Consensus 307 ~~~----~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~k 344 (345)
.+. +++++++|+.+|.+.. ++...+.+.+.+|+.++.+
T Consensus 576 aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 576 ALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred HHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 773 5799999999999876 5567788999999988765
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-16 Score=133.92 Aligned_cols=235 Identities=14% Similarity=0.110 Sum_probs=130.5
Q ss_pred CceEEEEcCcCCCchhhH-HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC-CCCCCCccchHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSF-KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK-GRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~-~~~~~~~~~~~~~~~~~~~ 170 (345)
.|.||++||+.|++...| +.+.+.+.++||.|++++.|| ++.+... +.-| .....++.+..+..
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rg-------------cs~~~n~~p~~y-h~G~t~D~~~~l~~ 140 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRG-------------CSGEANTSPRLY-HSGETEDIRFFLDW 140 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEeccc-------------ccCCcccCccee-cccchhHHHHHHHH
Confidence 379999999998865555 557788999999999999999 8877542 2223 22223333333333
Q ss_pred HHHHhCCccEEEEEeChhH-HHHHHHHHhCCc-ccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHccc--
Q psy4974 171 LLKLLGVCKVSLFGWCDGG-HLSFVFSMKYPH-MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDN-- 246 (345)
Q Consensus 171 ~l~~~~~~~i~lvGhS~Gg-~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 246 (345)
+.......++..+|.|+|| +++..++.+-.+ .+.+.+.++.+..........-.... ...+.......+.+....
T Consensus 141 l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s-~~ly~r~l~~~L~~~~~~kl 219 (345)
T COG0429 141 LKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFS-LRLYSRYLLRNLKRNAARKL 219 (345)
T ss_pred HHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchh-hhhhHHHHHHHHHHHHHHHH
Confidence 3333456699999999999 555555544321 24555544443322111100000000 000000000000000000
Q ss_pred --CCchhhhhHHHHHHHHH-----------------HHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHh-
Q psy4974 247 --DVNYITGIFNQYVDMVN-----------------LIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLN- 306 (345)
Q Consensus 247 --~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~- 306 (345)
-...........++.+. .....+........+++|.+|+|+|++.+|++++++..-....
T Consensus 220 ~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~ 299 (345)
T COG0429 220 KELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEM 299 (345)
T ss_pred HhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhc
Confidence 00001111111111111 1112222233466788999999999999999999866655555
Q ss_pred hcCCcEEEEeCCCCCccccc----ChH-HHHHHHHHHHHhh
Q psy4974 307 QLKFCQYYQFSSGGHSCHIK----HGQ-VFNEISRNFILEE 342 (345)
Q Consensus 307 ~~~~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~~~ 342 (345)
..|++.+.+-+.+||..++. +|. ...+.+.+||+..
T Consensus 300 ~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 300 LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 55788999999999998876 343 4567777887653
|
|
| >KOG4667|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-16 Score=124.75 Aligned_cols=213 Identities=14% Similarity=0.200 Sum_probs=135.9
Q ss_pred cCCCCceEEEEcCcCCCchh-hHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 89 YGSGAQVLFFTYGVLGEIRN-SFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 89 ~g~~~p~vv~lHG~~~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
.|+. ..+|++||+-++... ....++..|.+.|+.++.+|++| .|+|+.. + .+..+...++|
T Consensus 30 tgs~-e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~G-------------nGeS~gs---f-~~Gn~~~eadD 91 (269)
T KOG4667|consen 30 TGST-EIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSG-------------NGESEGS---F-YYGNYNTEADD 91 (269)
T ss_pred cCCc-eEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecC-------------CCCcCCc---c-ccCcccchHHH
Confidence 3444 499999999887323 34456788999999999999999 9999543 2 33345556788
Q ss_pred HHHHHHHhCCc-c--EEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH-----HHHHHhHhccCCChhhHHH
Q psy4974 168 AYELLKLLGVC-K--VSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV-----RVFEGMRRLSNWSPMARSE 239 (345)
Q Consensus 168 ~~~~l~~~~~~-~--i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 239 (345)
+..+++.+.-. . -+++|||-||.+++.+|.++++ +..+|-+++......... ..++++..-..|.
T Consensus 92 L~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid------ 164 (269)
T KOG4667|consen 92 LHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFID------ 164 (269)
T ss_pred HHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHHHhCCcee------
Confidence 88888887532 2 3589999999999999999976 778887777554322211 0111111111110
Q ss_pred HHHHcccCCchhhhhH--HHHHHHHHHHHHhhCchhhhccCC--CCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEE
Q psy4974 240 VLKAYDNDVNYITGIF--NQYVDMVNLIFKSYGRNVYQELLP--YVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQ 315 (345)
Q Consensus 240 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~--~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~ 315 (345)
+.....-+...| +..++.+. .+..+... ..+||||-+||..|.+||.+.+.++++.+|+.++.+
T Consensus 165 ----~~~rkG~y~~rvt~eSlmdrLn--------td~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~i 232 (269)
T KOG4667|consen 165 ----VGPRKGKYGYRVTEESLMDRLN--------TDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEI 232 (269)
T ss_pred ----cCcccCCcCceecHHHHHHHHh--------chhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEE
Confidence 000000000000 00011111 11122222 246999999999999999999999999999999999
Q ss_pred eCCCCCcccccChHHHHHHHHHHH
Q psy4974 316 FSSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 316 ~~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
++|+.|..... ..+.......|.
T Consensus 233 IEgADHnyt~~-q~~l~~lgl~f~ 255 (269)
T KOG4667|consen 233 IEGADHNYTGH-QSQLVSLGLEFI 255 (269)
T ss_pred ecCCCcCccch-hhhHhhhcceeE
Confidence 99999987643 233334444443
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-16 Score=135.40 Aligned_cols=106 Identities=20% Similarity=0.120 Sum_probs=84.9
Q ss_pred CceEEEEcCcCCC---chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGE---IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 93 ~p~vv~lHG~~~~---~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
.++||++||+++. ....|..+++.|+++||.|+++|+|| ||.|....... ++..+++|+.
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G-------------~G~S~g~~~~~----~~~~~~~Dv~ 87 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYG-------------CGDSAGDFAAA----RWDVWKEDVA 87 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCC-------------CCCCCCccccC----CHHHHHHHHH
Confidence 3689999999864 13567888999998999999999999 99996543333 4445555554
Q ss_pred ---HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 170 ---ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 170 ---~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
+++++.+.++++++||||||.+++.+|.++|++++++|+++|....
T Consensus 88 ~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g 136 (266)
T TIGR03101 88 AAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSG 136 (266)
T ss_pred HHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccch
Confidence 4556666789999999999999999999999999999999987653
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.2e-15 Score=129.91 Aligned_cols=202 Identities=13% Similarity=0.120 Sum_probs=117.9
Q ss_pred CceEEEEcCcCCCchhhHHHH--HHhh-CCCCeEEEEeCC--CCchhhhccCCccCCCCCCCCC----------------
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQ--LTAF-DPKLFTSIFWDP--PGNVVLYLLGKTCSGYGQSLPK---------------- 151 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~--~~~L-~~~G~~vi~~D~--~G~~~~~~~g~~~~~~G~s~~~---------------- 151 (345)
.|+|+++||++++. ..|... +..+ .+.|+.|+++|. +| +|.+...
T Consensus 42 ~P~vvllHG~~~~~-~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g-------------~~~~~~~~~w~~g~~~~~~~d~~ 107 (275)
T TIGR02821 42 VPVLWYLSGLTCTH-ENFMIKAGAQRFAAEHGLALVAPDTSPRG-------------TGIAGEDDAWDFGKGAGFYVDAT 107 (275)
T ss_pred CCEEEEccCCCCCc-cHHHhhhHHHHHHhhcCcEEEEeCCCCCc-------------CCCCCCcccccccCCccccccCC
Confidence 47999999999884 777432 3344 456899999998 44 3322110
Q ss_pred CCCCCCccch-HHHHHHHHHHHHH---hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhH
Q psy4974 152 GRSFVPFQYI-EEDVDIAYELLKL---LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMR 227 (345)
Q Consensus 152 ~~~~~~~~~~-~~~~~~~~~~l~~---~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 227 (345)
.........+ ...++++..+++. ++.++++++||||||.+|+.++.++|+.+++++++++........
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~-------- 179 (275)
T TIGR02821 108 EEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCP-------- 179 (275)
T ss_pred cCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCc--------
Confidence 0000000022 2335677777776 345689999999999999999999999999999998875432110
Q ss_pred hccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCCh-HHHHHHHh
Q psy4974 228 RLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST-QQVQSLLN 306 (345)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~-~~~~~~~~ 306 (345)
+. ...+...+..+. ..+.. .......... ....|+++++|+.|..++. .....+.+
T Consensus 180 ----~~---~~~~~~~l~~~~----~~~~~-----------~~~~~~~~~~-~~~~plli~~G~~D~~v~~~~~~~~~~~ 236 (275)
T TIGR02821 180 ----WG---QKAFSAYLGADE----AAWRS-----------YDASLLVADG-GRHSTILIDQGTADQFLDEQLRPDAFEQ 236 (275)
T ss_pred ----ch---HHHHHHHhcccc----cchhh-----------cchHHHHhhc-ccCCCeeEeecCCCcccCccccHHHHHH
Confidence 00 011111111110 00000 0000001111 2356999999999999997 34444444
Q ss_pred hc----CCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 307 QL----KFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 307 ~~----~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
.+ ..+++.++++++|.... -..+.+...+|..+
T Consensus 237 ~l~~~g~~v~~~~~~g~~H~f~~--~~~~~~~~~~~~~~ 273 (275)
T TIGR02821 237 ACRAAGQALTLRRQAGYDHSYYF--IASFIADHLRHHAE 273 (275)
T ss_pred HHHHcCCCeEEEEeCCCCccchh--HHHhHHHHHHHHHh
Confidence 33 35788999999997653 23344444455443
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.7e-15 Score=125.71 Aligned_cols=194 Identities=16% Similarity=0.166 Sum_probs=111.8
Q ss_pred cCCCCceEEEEcCcCCCchhhHHHHHH-hhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC-C-CCCCCCCccchHHHH
Q psy4974 89 YGSGAQVLFFTYGVLGEIRNSFKKQLT-AFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL-P-KGRSFVPFQYIEEDV 165 (345)
Q Consensus 89 ~g~~~p~vv~lHG~~~~~~~~~~~~~~-~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~-~-~~~~~~~~~~~~~~~ 165 (345)
.++..++||++||+|++. ..|..+.. .+......++.++-|........|.....+..-. . +.... +...+.+.+
T Consensus 10 ~~~~~~lvi~LHG~G~~~-~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~-~~~~i~~s~ 87 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSE-DLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPE-DEAGIEESA 87 (216)
T ss_dssp SST-SEEEEEE--TTS-H-HHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB--HHHHHHHH
T ss_pred CCCCceEEEEECCCCCCc-chhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhh-hHHHHHHHH
Confidence 344558999999999995 77776665 3333458888887654111111222000011110 0 11111 233445555
Q ss_pred HHHHHHHHHh-----CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHH
Q psy4974 166 DIAYELLKLL-----GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEV 240 (345)
Q Consensus 166 ~~~~~~l~~~-----~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
+.+.++++.. ..++++++|+|+||.+|+.++.++|+.+.++|++++.........
T Consensus 88 ~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~-------------------- 147 (216)
T PF02230_consen 88 ERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELE-------------------- 147 (216)
T ss_dssp HHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCH--------------------
T ss_pred HHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccc--------------------
Confidence 5566665542 345899999999999999999999999999999998654211000
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEEEEe
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQYYQF 316 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~~~~ 316 (345)
.. ..... ++|++++||++|+++|.+.++...+.+ .++++..+
T Consensus 148 -----~~---------------------------~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~ 193 (216)
T PF02230_consen 148 -----DR---------------------------PEALA--KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEY 193 (216)
T ss_dssp -----CC---------------------------HCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEE
T ss_pred -----cc---------------------------ccccC--CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEc
Confidence 00 11111 689999999999999988877777666 35789999
Q ss_pred CCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 317 SSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 317 ~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+++||.+. .+..+.+.+||+++
T Consensus 194 ~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 194 PGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp TT-SSS------HHHHHHHHHHHHHH
T ss_pred CCCCCCCC----HHHHHHHHHHHhhh
Confidence 99999875 44556677777653
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.1e-15 Score=125.19 Aligned_cols=251 Identities=14% Similarity=0.176 Sum_probs=148.5
Q ss_pred eeEEEcCceEEEEEcCC---CCceEEEEcCcCCCchhhHHHHH-----HhhCCCCeEEEEeCCCCchhhhccCCccCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQL-----TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYG 146 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~-----~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G 146 (345)
+.++..-..+++...|+ ++|++|-.|..|-+....|..+. +.+.++ |.|+-+|.|| +.
T Consensus 2 h~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPG-------------qe 67 (283)
T PF03096_consen 2 HDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPG-------------QE 67 (283)
T ss_dssp EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TT-------------TS
T ss_pred ceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCC-------------CC
Confidence 34555556777777774 36899999999988433376664 456666 9999999999 76
Q ss_pred CCCC-CCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHH
Q psy4974 147 QSLP-KGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEG 225 (345)
Q Consensus 147 ~s~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 225 (345)
.-.. -+..| .+.+++++++++..++++++++.++-+|--.||++...+|..+|++|.++||+++..............
T Consensus 68 ~ga~~~p~~y-~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K 146 (283)
T PF03096_consen 68 EGAATLPEGY-QYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQK 146 (283)
T ss_dssp TT-----TT------HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHH
T ss_pred CCcccccccc-cccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHH
Confidence 5432 23455 677899999999999999999999999999999999999999999999999999977654444333333
Q ss_pred hHh----ccCCChhhHHHHH-HHcccCCc-hhhhhHHHHH---------HHHHHHHHhh-CchhhhccCCCCCCCEEEEE
Q psy4974 226 MRR----LSNWSPMARSEVL-KAYDNDVN-YITGIFNQYV---------DMVNLIFKSY-GRNVYQELLPYVDVPVLVFH 289 (345)
Q Consensus 226 ~~~----~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~---------~~~~~~~~~~-~~~~~~~~l~~i~~Pvl~i~ 289 (345)
+.. ...+.....+.+. ..|+.... ...+..+.+. ..+..++..+ .+.++....+...||+|++.
T Consensus 147 ~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvv 226 (283)
T PF03096_consen 147 LSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVV 226 (283)
T ss_dssp HH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEE
T ss_pred HhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEE
Confidence 221 1223333333322 23332210 0011111111 1222222222 33455556677789999999
Q ss_pred eCCCCCCChHHHHHHHhhcC--CcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 290 SADDVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 290 G~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
|+..+.. +.+.++..++. ..++..++++|=.+..|+|+++++.+.=||...
T Consensus 227 G~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 227 GDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp ETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred ecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 9998765 35567777763 578999999999999999999999999999753
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=134.13 Aligned_cols=172 Identities=15% Similarity=0.115 Sum_probs=113.1
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
.|+||++||++.+. ..|..+++.|+++||.|+++|++| ++.... .. ...+..+..+++.+.+
T Consensus 52 ~PvVv~lHG~~~~~-~~y~~l~~~Las~G~~VvapD~~g-------------~~~~~~---~~-~i~d~~~~~~~l~~~l 113 (313)
T PLN00021 52 YPVLLFLHGYLLYN-SFYSQLLQHIASHGFIVVAPQLYT-------------LAGPDG---TD-EIKDAAAVINWLSSGL 113 (313)
T ss_pred CCEEEEECCCCCCc-ccHHHHHHHHHhCCCEEEEecCCC-------------cCCCCc---hh-hHHHHHHHHHHHHhhh
Confidence 37999999999984 889999999999999999999998 653311 11 2222223333333322
Q ss_pred HH-------hCCccEEEEEeChhHHHHHHHHHhCCc-----ccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHH
Q psy4974 173 KL-------LGVCKVSLFGWCDGGHLSFVFSMKYPH-----MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEV 240 (345)
Q Consensus 173 ~~-------~~~~~i~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
+. .+.++++++|||+||.+|+.+|..+++ +++++|+++|......... ..+..
T Consensus 114 ~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~-----------~~p~i---- 178 (313)
T PLN00021 114 AAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQ-----------TPPPV---- 178 (313)
T ss_pred hhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccC-----------CCCcc----
Confidence 22 234689999999999999999998864 5899999998654211000 00000
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCC-----C----CChH-HHHHHHhhcC-
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDV-----M----VSTQ-QVQSLLNQLK- 309 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~-----~----v~~~-~~~~~~~~~~- 309 (345)
+ .+......+.+|+|++.+..|. . .|.. ...++++.++
T Consensus 179 ---l----------------------------~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~ 227 (313)
T PLN00021 179 ---L----------------------------TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA 227 (313)
T ss_pred ---c----------------------------ccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC
Confidence 0 0011122368999999999763 2 2233 3366666664
Q ss_pred CcEEEEeCCCCCcccccCh
Q psy4974 310 FCQYYQFSSGGHSCHIKHG 328 (345)
Q Consensus 310 ~~~~~~~~~~gH~~~~~~~ 328 (345)
.+.+.+++++||+-++++.
T Consensus 228 ~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 228 PAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred CeeeeeecCCCcceeecCC
Confidence 6788889999999887544
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.8e-14 Score=118.49 Aligned_cols=215 Identities=18% Similarity=0.202 Sum_probs=135.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
++|+|+|+++|+. ..|..+++.|...++.|++++.+| .+.... ...+++++++...+.+.
T Consensus 1 ~~lf~~p~~gG~~-~~y~~la~~l~~~~~~v~~i~~~~-------------~~~~~~------~~~si~~la~~y~~~I~ 60 (229)
T PF00975_consen 1 RPLFCFPPAGGSA-SSYRPLARALPDDVIGVYGIEYPG-------------RGDDEP------PPDSIEELASRYAEAIR 60 (229)
T ss_dssp -EEEEESSTTCSG-GGGHHHHHHHTTTEEEEEEECSTT-------------SCTTSH------EESSHHHHHHHHHHHHH
T ss_pred CeEEEEcCCccCH-HHHHHHHHhCCCCeEEEEEEecCC-------------CCCCCC------CCCCHHHHHHHHHHHhh
Confidence 3899999999995 999999999988569999999999 762211 34478889998888777
Q ss_pred HhCCc-cEEEEEeChhHHHHHHHHHhC---CcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccC--
Q psy4974 174 LLGVC-KVSLFGWCDGGHLSFVFSMKY---PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDND-- 247 (345)
Q Consensus 174 ~~~~~-~i~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 247 (345)
....+ ++.|+|||+||.+|+.+|.+. ...+..++++++................. .....+.......
T Consensus 61 ~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 134 (229)
T PF00975_consen 61 ARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDE------QFIEELRRIGGTPDA 134 (229)
T ss_dssp HHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHH------HHHHHHHHHCHHHHH
T ss_pred hhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHH------HHHHHHHHhcCCchh
Confidence 76655 999999999999999999864 34589999999765432111111100000 0111111111000
Q ss_pred CchhhhhHHHHHHHHHHHHHhhCchhhhccCCCC---CCCEEEEEeCCCCCCChH---HHHHHHhhcC-CcEEEEeCCCC
Q psy4974 248 VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYV---DVPVLVFHSADDVMVSTQ---QVQSLLNQLK-FCQYYQFSSGG 320 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i---~~Pvl~i~G~~D~~v~~~---~~~~~~~~~~-~~~~~~~~~~g 320 (345)
.......+......+........... .... .+|.++.....|...... ....+.+..+ ..+++.++ ++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~-G~ 209 (229)
T PF00975_consen 135 SLEDEELLARLLRALRDDFQALENYS----IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP-GD 209 (229)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTCS-----TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-SE
T ss_pred hhcCHHHHHHHHHHHHHHHHHHhhcc----CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-CC
Confidence 00111122222233222222221111 1112 457889999999887755 3444676665 45788887 79
Q ss_pred Cccccc-ChHHHHHHHHHHH
Q psy4974 321 HSCHIK-HGQVFNEISRNFI 339 (345)
Q Consensus 321 H~~~~~-~~~~~~~~i~~fl 339 (345)
|+.++. +..++++.|.++|
T Consensus 210 H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 210 HFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp TTGHHSTTHHHHHHHHHHHH
T ss_pred CcEecchHHHHHHHHHhccC
Confidence 999887 7788888888876
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-14 Score=128.56 Aligned_cols=233 Identities=12% Similarity=0.094 Sum_probs=129.0
Q ss_pred eeeEEEcCceEEEEE-c--CCCCceEEEEcCcCCCchhh-HHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIK-Y--GSGAQVLFFTYGVLGEIRNS-FKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~-~--g~~~p~vv~lHG~~~~~~~~-~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
.-.+.+.|..|.... . ++++.|+|++.|+.++-... |..+.++|.++|+.++++|.|| .|.|.
T Consensus 167 ~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG-------------~G~s~ 233 (411)
T PF06500_consen 167 EVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPG-------------QGESP 233 (411)
T ss_dssp EEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TT-------------SGGGT
T ss_pred EEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCC-------------Ccccc
Confidence 444555665555332 2 23333444444544553445 4555577889999999999999 99885
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHhC---CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh
Q psy4974 150 PKGRSFVPFQYIEEDVDIAYELLKLLG---VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM 226 (345)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 226 (345)
... + +. +.+...+.+.+++.... ..+|.++|.|+||++|.++|...+++++++|.++++...--...
T Consensus 234 ~~~--l-~~-D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~------ 303 (411)
T PF06500_consen 234 KWP--L-TQ-DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDP------ 303 (411)
T ss_dssp TT---S--S--CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-H------
T ss_pred cCC--C-Cc-CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccH------
Confidence 332 2 22 22344566666666653 34899999999999999999988889999999999765322111
Q ss_pred HhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccC--CCCCCCEEEEEeCCCCCCChHHHHHH
Q psy4974 227 RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELL--PYVDVPVLVFHSADDVMVSTQQVQSL 304 (345)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~Pvl~i~G~~D~~v~~~~~~~~ 304 (345)
......+......+...++... . ..+. +......+... ....+ .+.++|+|.+.+++|+++|.+..+.+
T Consensus 304 ~~~~~~P~my~d~LA~rlG~~~--~--~~~~----l~~el~~~SLk-~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~li 374 (411)
T PF06500_consen 304 EWQQRVPDMYLDVLASRLGMAA--V--SDES----LRGELNKFSLK-TQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLI 374 (411)
T ss_dssp HHHTTS-HHHHHHHHHHCT-SC--E---HHH----HHHHGGGGSTT-TTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHhCCcc--C--CHHH----HHHHHHhcCcc-hhccccCCCCCcceEEeecCCCCCCCHHHHHHH
Confidence 1112223333334444444331 0 0111 11111111110 12234 56789999999999999999999999
Q ss_pred HhhcCCcEEEEeCCCC-CcccccChHHHHHHHHHHHHhh
Q psy4974 305 LNQLKFCQYYQFSSGG-HSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 305 ~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+..-.+.+...++... |.. -+.-...+.+||++.
T Consensus 375 a~~s~~gk~~~~~~~~~~~g----y~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 375 AESSTDGKALRIPSKPLHMG----YPQALDEIYKWLEDK 409 (411)
T ss_dssp HHTBTT-EEEEE-SSSHHHH----HHHHHHHHHHHHHHH
T ss_pred HhcCCCCceeecCCCccccc----hHHHHHHHHHHHHHh
Confidence 9887778888887544 322 235667778888754
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-14 Score=121.35 Aligned_cols=173 Identities=12% Similarity=0.055 Sum_probs=99.9
Q ss_pred CCceEEEEcCcCCCchhhHH---HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC------CccchH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFK---KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV------PFQYIE 162 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~---~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~------~~~~~~ 162 (345)
..|+||++||++++. ..+. .+...+.+.||.|+++|++| ++.+.....-+. ......
T Consensus 12 ~~P~vv~lHG~~~~~-~~~~~~~~~~~~a~~~g~~Vv~Pd~~g-------------~~~~~~~~~~~~~~~~~~~~~~~~ 77 (212)
T TIGR01840 12 PRALVLALHGCGQTA-SAYVIDWGWKAAADRYGFVLVAPEQTS-------------YNSSNNCWDWFFTHHRARGTGEVE 77 (212)
T ss_pred CCCEEEEeCCCCCCH-HHHhhhcChHHHHHhCCeEEEecCCcC-------------ccccCCCCCCCCccccCCCCccHH
Confidence 458999999999884 5554 24445555799999999999 653321100000 001112
Q ss_pred HHHHHHHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHH
Q psy4974 163 EDVDIAYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEV 240 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
+..+.+..+.+..++ ++++|+|||+||.+++.++.++|+.+.+++.+++.......... ...
T Consensus 78 ~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~--~~~-------------- 141 (212)
T TIGR01840 78 SLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSI--SAT-------------- 141 (212)
T ss_pred HHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccch--hhH--------------
Confidence 222222233333333 48999999999999999999999999999988876543221100 000
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK 309 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~ 309 (345)
... .. ......+.+..... .........|++++||++|.+||.+.++.+.+.+.
T Consensus 142 ~~~-~~-----~~~~~~~~~~~~~~---------~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 142 PQM-CT-----AATAASVCRLVRGM---------QSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred hhc-CC-----CCCHHHHHHHHhcc---------CCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 000 00 00011111111110 01122233457899999999999998888887763
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >KOG1838|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.7e-14 Score=124.67 Aligned_cols=243 Identities=14% Similarity=0.203 Sum_probs=139.2
Q ss_pred ceeeeEEE-cCceEEEE--EcC--------CCCceEEEEcCcCCCchhhH-HHHHHhhCCCCeEEEEeCCCCchhhhccC
Q psy4974 72 FTEGFFSI-KGCDIRFI--KYG--------SGAQVLFFTYGVLGEIRNSF-KKQLTAFDPKLFTSIFWDPPGNVVLYLLG 139 (345)
Q Consensus 72 ~~~~~~~~-~g~~l~~~--~~g--------~~~p~vv~lHG~~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~~~~~~~g 139 (345)
.+..+++. ||..+.+- ... ...|.||++||+.+++.+.| +.++..+.++||+|++++.||
T Consensus 93 y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG-------- 164 (409)
T KOG1838|consen 93 YTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRG-------- 164 (409)
T ss_pred ceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCC--------
Confidence 34556666 77666542 111 23489999999998865665 557777888899999999999
Q ss_pred CccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCc---ccceeeEeccCCCC-
Q psy4974 140 KTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH---MVHKLVIWGTKSFL- 215 (345)
Q Consensus 140 ~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~- 215 (345)
+|.+.-......+....++....+..+.+.....++..+|.||||.+...|..+..+ .+.++++++|.-..
T Consensus 165 -----~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~ 239 (409)
T KOG1838|consen 165 -----LGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLA 239 (409)
T ss_pred -----CCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhh
Confidence 998875443221444444444444444445566689999999999999998877543 35566666664432
Q ss_pred -Cch-----hHHHHHHhHhc--cCCChhhHHHHH-HHcccCCchhhhhHHHHHHHH-------HHHHHhhCchhhhccCC
Q psy4974 216 -TID-----NVRVFEGMRRL--SNWSPMARSEVL-KAYDNDVNYITGIFNQYVDMV-------NLIFKSYGRNVYQELLP 279 (345)
Q Consensus 216 -~~~-----~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~ 279 (345)
... ....+..+... .......+..+. +....+........++.-+.+ ...-..+........+.
T Consensus 240 ~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~ 319 (409)
T KOG1838|consen 240 ASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVD 319 (409)
T ss_pred hhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcc
Confidence 000 00111111000 000000000000 000000000000111111111 11112233334567788
Q ss_pred CCCCCEEEEEeCCCCCCChH-HHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 280 YVDVPVLVFHSADDVMVSTQ-QVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 280 ~i~~Pvl~i~G~~D~~v~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
+|++|+|+|.+.+|+++|.. .-.......|++-+++-..+||..++|.
T Consensus 320 ~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 320 KIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred cccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 99999999999999999973 4444555567888888889999998876
|
|
| >KOG2931|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-13 Score=114.16 Aligned_cols=251 Identities=15% Similarity=0.192 Sum_probs=166.7
Q ss_pred eeeEEEcCceEEEEEcCC---CCceEEEEcCcCCCchhhHHHHH-----HhhCCCCeEEEEeCCCCchhhhccCCccCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQL-----TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGY 145 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~-----~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~ 145 (345)
++.+...-..+++..+|+ ++|++|-.|..+.+....|..+. ..+.++ |.|+-+|.|| +
T Consensus 24 e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PG-------------q 89 (326)
T KOG2931|consen 24 EHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPG-------------Q 89 (326)
T ss_pred eeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCc-------------c
Confidence 555555556677777764 35789999999988534466553 456677 9999999999 7
Q ss_pred CCCC-CCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHH
Q psy4974 146 GQSL-PKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFE 224 (345)
Q Consensus 146 G~s~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 224 (345)
-... .-+.+| .+.++++.++++..++++++.+.++-+|--.|++|..++|..+|++|-++||+++.+...........
T Consensus 90 e~gAp~~p~~y-~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~ 168 (326)
T KOG2931|consen 90 EDGAPSFPEGY-PYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYN 168 (326)
T ss_pred ccCCccCCCCC-CCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHH
Confidence 5443 234556 67799999999999999999999999999999999999999999999999999987665433332222
Q ss_pred HhH----hccCCChhhHHHH-HHHcccCCc-hhhhhHHHHHH---------HHHHHHHhhC-chhhhccCC----CCCCC
Q psy4974 225 GMR----RLSNWSPMARSEV-LKAYDNDVN-YITGIFNQYVD---------MVNLIFKSYG-RNVYQELLP----YVDVP 284 (345)
Q Consensus 225 ~~~----~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~-~~~~~~~l~----~i~~P 284 (345)
.+. ....+.......+ ...|+++.. -..++.+.+.. .+..++..+. +.++..... .++||
T Consensus 169 K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~ 248 (326)
T KOG2931|consen 169 KVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCP 248 (326)
T ss_pred HHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCcccccc
Confidence 221 1111112222222 223333310 01112222211 2222222222 122222222 45699
Q ss_pred EEEEEeCCCCCCChHHHHHHHhhcC--CcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 285 VLVFHSADDVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 285 vl~i~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+|++.|++.+.+. ...+....+. +..+..+.++|-.+..++|.++.+.+.=|+..
T Consensus 249 vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 249 VLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred EEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 9999999987664 4555555552 57888999999999989999999999999864
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.2e-14 Score=120.53 Aligned_cols=178 Identities=16% Similarity=0.175 Sum_probs=112.5
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccc--------hHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY--------IEED 164 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~--------~~~~ 164 (345)
.|.||++|++.|-. ...+.+++.|+++||.|+++|+-+ -.......... .... .+..
T Consensus 14 ~~~Vvv~~d~~G~~-~~~~~~ad~lA~~Gy~v~~pD~f~-------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 78 (218)
T PF01738_consen 14 RPAVVVIHDIFGLN-PNIRDLADRLAEEGYVVLAPDLFG-------------GRGAPPSDPEE-AFAAMRELFAPRPEQV 78 (218)
T ss_dssp EEEEEEE-BTTBS--HHHHHHHHHHHHTT-EEEEE-CCC-------------CTS--CCCHHC-HHHHHHHCHHHSHHHH
T ss_pred CCEEEEEcCCCCCc-hHHHHHHHHHHhcCCCEEeccccc-------------CCCCCccchhh-HHHHHHHHHhhhHHHH
Confidence 47999999999984 777889999999999999999865 22100111000 0001 1233
Q ss_pred HHHHHHHHHHh---C---CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHH
Q psy4974 165 VDIAYELLKLL---G---VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS 238 (345)
Q Consensus 165 ~~~~~~~l~~~---~---~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (345)
.+++.+.++.+ . .++|.++|+|+||.+++.+|... +.+++.|..-|.....
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~---------------------- 135 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPP---------------------- 135 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGG----------------------
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCC----------------------
Confidence 44554444443 3 34899999999999999999887 5799998887721100
Q ss_pred HHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEEE
Q psy4974 239 EVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQYY 314 (345)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~~ 314 (345)
.......++++|+++++|++|+.++.+..+.+.+.+ ...+++
T Consensus 136 ----------------------------------~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (218)
T PF01738_consen 136 ----------------------------------PPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVH 181 (218)
T ss_dssp ----------------------------------GHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEE
T ss_pred ----------------------------------cchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEE
Confidence 002224457899999999999999988777776665 468999
Q ss_pred EeCCCCCcccccCh--------HHHHHHHHHHHHhh
Q psy4974 315 QFSSGGHSCHIKHG--------QVFNEISRNFILEE 342 (345)
Q Consensus 315 ~~~~~gH~~~~~~~--------~~~~~~i~~fl~~~ 342 (345)
+|+|++|-+..... ++..+.+.+||+++
T Consensus 182 ~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 182 VYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp EETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred ECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 99999998766322 34557788888764
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.2e-13 Score=119.64 Aligned_cols=240 Identities=16% Similarity=0.099 Sum_probs=124.2
Q ss_pred eeEEEcCceEEEEE---c-CCCC-ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhh-----ccCCccCC
Q psy4974 75 GFFSIKGCDIRFIK---Y-GSGA-QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLY-----LLGKTCSG 144 (345)
Q Consensus 75 ~~~~~~g~~l~~~~---~-g~~~-p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~-----~~g~~~~~ 144 (345)
.+...+|..|+-.. . +.++ |.||.+||.++.. ..|...+. ++.+||.|+.+|.||++... ..+.+..+
T Consensus 60 ~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~-~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g 137 (320)
T PF05448_consen 60 SFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRS-GDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKG 137 (320)
T ss_dssp EEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--G-GGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSS
T ss_pred EEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCC-CCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCcc
Confidence 33344676666322 2 2233 7999999999984 66665543 56778999999999944211 01111111
Q ss_pred C---CCCCCCCCCCCCccchHHHHHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 145 Y---GQSLPKGRSFVPFQYIEEDVDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 145 ~---G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
| |..+. .+.+ .+.....|....++.+ +.++|.+.|.|+||.+++.+|+..+ +|++++...|...-
T Consensus 138 ~~~~g~~~~-~e~~----yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d 211 (320)
T PF05448_consen 138 HITRGIDDN-PEDY----YYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD 211 (320)
T ss_dssp STTTTTTS--TTT-----HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS
T ss_pred HHhcCccCc-hHHH----HHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc
Confidence 1 11110 1111 2333334444433332 2348999999999999999999886 69999988875431
Q ss_pred CchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCC
Q psy4974 216 TIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVM 295 (345)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~ 295 (345)
-. ..+..... ...-.......+..... .......+......|......+|+||+++-.|-.|.+
T Consensus 212 ~~---~~~~~~~~--~~~y~~~~~~~~~~d~~-----------~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~ 275 (320)
T PF05448_consen 212 FR---RALELRAD--EGPYPEIRRYFRWRDPH-----------HEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPV 275 (320)
T ss_dssp HH---HHHHHT----STTTHHHHHHHHHHSCT-----------HCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SS
T ss_pred hh---hhhhcCCc--cccHHHHHHHHhccCCC-----------cccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCC
Confidence 10 00000000 00000000111100011 0111222222333444556678899999999999999
Q ss_pred CChHHHHHHHhhcC-CcEEEEeCCCCCcccccChHHH-HHHHHHHHHhh
Q psy4974 296 VSTQQVQSLLNQLK-FCQYYQFSSGGHSCHIKHGQVF-NEISRNFILEE 342 (345)
Q Consensus 296 v~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~-~~~i~~fl~~~ 342 (345)
+|+...-...+.++ ..++.+++..||.. +.++ .+...+||.++
T Consensus 276 cPP~t~fA~yN~i~~~K~l~vyp~~~He~----~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 276 CPPSTQFAAYNAIPGPKELVVYPEYGHEY----GPEFQEDKQLNFLKEH 320 (320)
T ss_dssp S-HHHHHHHHCC--SSEEEEEETT--SST----THHHHHHHHHHHHHH-
T ss_pred CCchhHHHHHhccCCCeeEEeccCcCCCc----hhhHHHHHHHHHHhcC
Confidence 99999999999986 57999999999954 4444 77788888764
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.5e-14 Score=124.15 Aligned_cols=217 Identities=13% Similarity=0.056 Sum_probs=123.9
Q ss_pred CCceEEEEcCcC---CCchhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 92 GAQVLFFTYGVL---GEIRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 92 ~~p~vv~lHG~~---~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
+.|+||++||++ ++ ...|..++..|+. .|+.|+.+|+|. ......+. ...+..+..+.
T Consensus 80 ~~p~vv~~HGGg~~~g~-~~~~~~~~~~la~~~g~~Vv~vdYrl-------------ape~~~p~----~~~D~~~a~~~ 141 (318)
T PRK10162 80 SQATLFYLHGGGFILGN-LDTHDRIMRLLASYSGCTVIGIDYTL-------------SPEARFPQ----AIEEIVAVCCY 141 (318)
T ss_pred CCCEEEEEeCCcccCCC-chhhhHHHHHHHHHcCCEEEEecCCC-------------CCCCCCCC----cHHHHHHHHHH
Confidence 347899999977 44 3678888888876 489999999998 43221111 11122223334
Q ss_pred HHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhC------CcccceeeEeccCCCCCchhHHHHHHhHhcc-CCChhhHH
Q psy4974 168 AYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKY------PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS-NWSPMARS 238 (345)
Q Consensus 168 ~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 238 (345)
+.+..+.+++ ++++|+|+|+||.+|+.++... +..+.+++++.|......... ........ .+......
T Consensus 142 l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s--~~~~~~~~~~l~~~~~~ 219 (318)
T PRK10162 142 FHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVS--RRLLGGVWDGLTQQDLQ 219 (318)
T ss_pred HHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChh--HHHhCCCccccCHHHHH
Confidence 4444445655 4899999999999999988753 357899999988655321110 00000000 01111111
Q ss_pred HHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEEE
Q psy4974 239 EVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQYY 314 (345)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~~ 314 (345)
.+...|..+. .. ............+...-.|+++++|+.|.+.+ ..+.+++.+ -.++++
T Consensus 220 ~~~~~y~~~~--------------~~-~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~ 282 (318)
T PRK10162 220 MYEEAYLSND--------------AD-RESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFK 282 (318)
T ss_pred HHHHHhCCCc--------------cc-cCCcccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEE
Confidence 1111111100 00 00000000001121122599999999999876 444555444 357999
Q ss_pred EeCCCCCcccc-----cChHHHHHHHHHHHHhhccC
Q psy4974 315 QFSSGGHSCHI-----KHGQVFNEISRNFILEENKT 345 (345)
Q Consensus 315 ~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~~k~ 345 (345)
++++..|.+.. +...+..+.+.+||++..+|
T Consensus 283 ~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~~ 318 (318)
T PRK10162 283 LYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLKT 318 (318)
T ss_pred EECCCceehhhccCchHHHHHHHHHHHHHHHHHhcC
Confidence 99999997643 23456778888999887665
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=7e-14 Score=114.15 Aligned_cols=178 Identities=18% Similarity=0.221 Sum_probs=119.9
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccc----hHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY----IEEDVDI 167 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~----~~~~~~~ 167 (345)
..|+||++||+|++ ...+.++.+.+..+ +.++.+--+- ..-|.. -..+......| +.+. ...+++.
T Consensus 17 ~~~~iilLHG~Ggd-e~~~~~~~~~~~P~-~~~is~rG~v----~~~g~~---~~f~~~~~~~~-d~edl~~~~~~~~~~ 86 (207)
T COG0400 17 AAPLLILLHGLGGD-ELDLVPLPELILPN-ATLVSPRGPV----AENGGP---RFFRRYDEGSF-DQEDLDLETEKLAEF 86 (207)
T ss_pred CCcEEEEEecCCCC-hhhhhhhhhhcCCC-CeEEcCCCCc----cccCcc---cceeecCCCcc-chhhHHHHHHHHHHH
Confidence 33689999999999 48888877777776 7776653221 111110 00111112223 2222 2334555
Q ss_pred HHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcc
Q psy4974 168 AYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYD 245 (345)
Q Consensus 168 ~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
+..+.++.++ ++++++|+|.||.+++.+..++|+.++++|++++.......
T Consensus 87 l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~--------------------------- 139 (207)
T COG0400 87 LEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE--------------------------- 139 (207)
T ss_pred HHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc---------------------------
Confidence 5566666666 69999999999999999999999999999999997664211
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEEEeCCCCC
Q psy4974 246 NDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYYQFSSGGH 321 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~~~gH 321 (345)
.....-..|+++++|+.|+++|...+.++.+.+. +++...++ +||
T Consensus 140 ------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH 188 (207)
T COG0400 140 ------------------------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGH 188 (207)
T ss_pred ------------------------------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCC
Confidence 0011235799999999999999988888877663 57888888 999
Q ss_pred cccccChHHHHHHHHHHHHh
Q psy4974 322 SCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 322 ~~~~~~~~~~~~~i~~fl~~ 341 (345)
.+. .+-.+.+.+|+.+
T Consensus 189 ~i~----~e~~~~~~~wl~~ 204 (207)
T COG0400 189 EIP----PEELEAARSWLAN 204 (207)
T ss_pred cCC----HHHHHHHHHHHHh
Confidence 775 3444555667654
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-13 Score=107.49 Aligned_cols=181 Identities=15% Similarity=0.113 Sum_probs=125.9
Q ss_pred eEEEEEcC-CCCceEEEEcC-----cCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 83 DIRFIKYG-SGAQVLFFTYG-----VLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 83 ~l~~~~~g-~~~p~vv~lHG-----~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
...|.... +..|..|++|. +..+ ......++..|.+.||.++.+|+|| .|.|...-+.
T Consensus 17 e~~~~~~~~~~~~iAli~HPHPl~gGtm~-nkvv~~la~~l~~~G~atlRfNfRg-------------VG~S~G~fD~-- 80 (210)
T COG2945 17 EGRYEPAKTPAAPIALICHPHPLFGGTMN-NKVVQTLARALVKRGFATLRFNFRG-------------VGRSQGEFDN-- 80 (210)
T ss_pred eeccCCCCCCCCceEEecCCCccccCccC-CHHHHHHHHHHHhCCceEEeecccc-------------cccccCcccC--
Confidence 33344333 34467778775 2233 2556677888999999999999999 9999654332
Q ss_pred CccchHHHHHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCCh
Q psy4974 157 PFQYIEEDVDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSP 234 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (345)
.... .+++..+.++++....+ .+.+.|+|+|+++++.+|.+.|+ ....+.+.|.....
T Consensus 81 GiGE-~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~------------------ 140 (210)
T COG2945 81 GIGE-LEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY------------------ 140 (210)
T ss_pred Ccch-HHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch------------------
Confidence 2222 23344455555555433 34689999999999999999875 44444444433210
Q ss_pred hhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEE
Q psy4974 235 MARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYY 314 (345)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~ 314 (345)
+ ...+....+|.++|+|+.|.+++.....++++. ...+++
T Consensus 141 ------------d---------------------------fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i 180 (210)
T COG2945 141 ------------D---------------------------FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVI 180 (210)
T ss_pred ------------h---------------------------hhhccCCCCCceeEecChhhhhcHHHHHHhhcC-CCCceE
Confidence 0 122445678999999999999999888888887 467888
Q ss_pred EeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 315 QFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 315 ~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
++++++|+++ .+-..+.+.+.+||.
T Consensus 181 ~i~~a~HFF~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 181 TIPGADHFFH-GKLIELRDTIADFLE 205 (210)
T ss_pred EecCCCceec-ccHHHHHHHHHHHhh
Confidence 9999999988 446788899999984
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.3e-13 Score=118.94 Aligned_cols=230 Identities=12% Similarity=0.130 Sum_probs=144.7
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|+||++..+.+.....-+.+++.|.+ |+.|+..|+.. -+..+.....+ +++++++.+.+.++
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~-------------p~~vp~~~~~f----~ldDYi~~l~~~i~ 164 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVN-------------ARMVPLSAGKF----DLEDYIDYLIEFIR 164 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCC-------------CCCCchhcCCC----CHHHHHHHHHHHHH
Confidence 69999999987743445778899988 89999999877 65443445666 67777888889999
Q ss_pred HhCCccEEEEEeChhHHHHHHHHHhC-----CcccceeeEeccCCCCCch--hHHHH------HHhHhc-----------
Q psy4974 174 LLGVCKVSLFGWCDGGHLSFVFSMKY-----PHMVHKLVIWGTKSFLTID--NVRVF------EGMRRL----------- 229 (345)
Q Consensus 174 ~~~~~~i~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~--~~~~~------~~~~~~----------- 229 (345)
.+|.+ ++++|+|+||..++.+++.. |.+++++++++++...... ....+ ......
T Consensus 165 ~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g 243 (406)
T TIGR01849 165 FLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPG 243 (406)
T ss_pred HhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccC
Confidence 99877 99999999999977666554 6679999999987765432 11111 001100
Q ss_pred -c--CCChhhHHH-------------HHH---Hcc-cCCchhhh---hHH-----------HHHHHHHHHHHhhCch---
Q psy4974 230 -S--NWSPMARSE-------------VLK---AYD-NDVNYITG---IFN-----------QYVDMVNLIFKSYGRN--- 272 (345)
Q Consensus 230 -~--~~~~~~~~~-------------~~~---~~~-~~~~~~~~---~~~-----------~~~~~~~~~~~~~~~~--- 272 (345)
. ..+...... ... .+. .+...... .++ .+.+.+...+......
T Consensus 244 ~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~ 323 (406)
T TIGR01849 244 AGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGK 323 (406)
T ss_pred CCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCc
Confidence 0 011111100 010 110 00000000 000 1112222222211100
Q ss_pred ----hhhccCCCCC-CCEEEEEeCCCCCCChHHHHHHHhhc---C--CcEEEEeCCCCCccccc---ChHHHHHHHHHHH
Q psy4974 273 ----VYQELLPYVD-VPVLVFHSADDVMVSTQQVQSLLNQL---K--FCQYYQFSSGGHSCHIK---HGQVFNEISRNFI 339 (345)
Q Consensus 273 ----~~~~~l~~i~-~Pvl~i~G~~D~~v~~~~~~~~~~~~---~--~~~~~~~~~~gH~~~~~---~~~~~~~~i~~fl 339 (345)
.-.-.+.+|+ +|+|.+.|++|.++|+..+..+.+.+ + +.+....+++||+..+. -++++...|.+||
T Consensus 324 l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl 403 (406)
T TIGR01849 324 FIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFI 403 (406)
T ss_pred EEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHH
Confidence 0122356788 99999999999999999999988874 4 34567777899997773 4678889999999
Q ss_pred Hhh
Q psy4974 340 LEE 342 (345)
Q Consensus 340 ~~~ 342 (345)
.++
T Consensus 404 ~~~ 406 (406)
T TIGR01849 404 RRN 406 (406)
T ss_pred HhC
Confidence 763
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.7e-12 Score=119.52 Aligned_cols=208 Identities=13% Similarity=0.020 Sum_probs=125.5
Q ss_pred ceEEEEcCcCCCchhhH-----HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSF-----KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
+|||+++.+... ...| +.++++|.++||+|+.+|+++ -+.. ...+ +++++++.+
T Consensus 216 ~PLLIVPp~INK-~YIlDL~P~~SlVr~lv~qG~~VflIsW~n-------------P~~~---~r~~----~ldDYv~~i 274 (560)
T TIGR01839 216 RPLLVVPPQINK-FYIFDLSPEKSFVQYCLKNQLQVFIISWRN-------------PDKA---HREW----GLSTYVDAL 274 (560)
T ss_pred CcEEEechhhhh-hheeecCCcchHHHHHHHcCCeEEEEeCCC-------------CChh---hcCC----CHHHHHHHH
Confidence 699999999755 3555 578999999999999999988 6555 2334 445555555
Q ss_pred HHHHHHh----CCccEEEEEeChhHHHHHH----HHHhCCc-ccceeeEeccCCCCCchh-HH------HH---H-HhHh
Q psy4974 169 YELLKLL----GVCKVSLFGWCDGGHLSFV----FSMKYPH-MVHKLVIWGTKSFLTIDN-VR------VF---E-GMRR 228 (345)
Q Consensus 169 ~~~l~~~----~~~~i~lvGhS~Gg~ia~~----~a~~~p~-~v~~lvl~~~~~~~~~~~-~~------~~---~-~~~~ 228 (345)
.+.++.+ +.+++.++|||+||.++.. +++++++ +|++++++.+...+.... .. .. + .+..
T Consensus 275 ~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~ 354 (560)
T TIGR01839 275 KEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQ 354 (560)
T ss_pred HHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHh
Confidence 5544443 6679999999999999886 7788885 799999998876654211 00 01 1 1111
Q ss_pred ccCCChhhHHHHHHHcccCCc--------------hhhhhHHHH-----------HHHHHHHHHhhCc--------hhhh
Q psy4974 229 LSNWSPMARSEVLKAYDNDVN--------------YITGIFNQY-----------VDMVNLIFKSYGR--------NVYQ 275 (345)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~-----------~~~~~~~~~~~~~--------~~~~ 275 (345)
..............++..... -.......| ...+..++..... ..-.
T Consensus 355 ~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~ 434 (560)
T TIGR01839 355 AGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTP 434 (560)
T ss_pred cCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEECCEE
Confidence 111111111111111111100 000001111 1111222211110 0112
Q ss_pred ccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-CcEEEEeCCCCCcc
Q psy4974 276 ELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-FCQYYQFSSGGHSC 323 (345)
Q Consensus 276 ~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH~~ 323 (345)
-.+.+|+||++++.|.+|.++|++.+..+.+.+. +.+++.. .+||..
T Consensus 435 idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~-~gGHIg 482 (560)
T TIGR01839 435 IDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLS-NSGHIQ 482 (560)
T ss_pred echhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEec-CCCccc
Confidence 3467899999999999999999999999998886 4566555 488963
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.6e-12 Score=109.64 Aligned_cols=180 Identities=15% Similarity=0.162 Sum_probs=128.4
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC-C--CCCC----ccchHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG-R--SFVP----FQYIEEDVD 166 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~-~--~~~~----~~~~~~~~~ 166 (345)
|.||++|++.|- ....+.+++.|+..||.|+++|+-++ .|.+.... . .... .....+...
T Consensus 28 P~VIv~hei~Gl-~~~i~~~a~rlA~~Gy~v~~Pdl~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (236)
T COG0412 28 PGVIVLHEIFGL-NPHIRDVARRLAKAGYVVLAPDLYGR------------QGDPTDIEDEPAELETGLVERVDPAEVLA 94 (236)
T ss_pred CEEEEEecccCC-chHHHHHHHHHHhCCcEEEechhhcc------------CCCCCcccccHHHHhhhhhccCCHHHHHH
Confidence 899999999998 48999999999999999999998661 22221111 0 0000 011234455
Q ss_pred HHHHHHHHh---C---CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHH
Q psy4974 167 IAYELLKLL---G---VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEV 240 (345)
Q Consensus 167 ~~~~~l~~~---~---~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
++.+.++.+ . .++|.++|+||||.+++.++.+.| .+++.+..-+......
T Consensus 95 d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~----------------------- 150 (236)
T COG0412 95 DIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD----------------------- 150 (236)
T ss_pred HHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc-----------------------
Confidence 555554444 3 457999999999999999999887 6888888877544210
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEEEe
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYYQF 316 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~~~ 316 (345)
.....++++|+|+.+|+.|..+|......+.+.+. ..++.++
T Consensus 151 ----------------------------------~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y 196 (236)
T COG0412 151 ----------------------------------TADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIY 196 (236)
T ss_pred ----------------------------------ccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEe
Confidence 11144689999999999999999887777776663 4688999
Q ss_pred CCCCCcccccC-----------hHHHHHHHHHHHHhhcc
Q psy4974 317 SSGGHSCHIKH-----------GQVFNEISRNFILEENK 344 (345)
Q Consensus 317 ~~~gH~~~~~~-----------~~~~~~~i~~fl~~~~k 344 (345)
+++.|.++-+. .+.-.+.+.+||++...
T Consensus 197 ~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 197 PGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 99989877432 13456778888887653
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.5e-14 Score=110.84 Aligned_cols=155 Identities=14% Similarity=0.057 Sum_probs=103.5
Q ss_pred EEEEcCcCCCchhhHHHHH-HhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHH
Q psy4974 96 LFFTYGVLGEIRNSFKKQL-TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKL 174 (345)
Q Consensus 96 vv~lHG~~~~~~~~~~~~~-~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~ 174 (345)
|+++||+++++...|.... +.|... ++|-.+|+-. | ..+++.+.+.+.+..
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~~-------------------P--------~~~~W~~~l~~~i~~ 52 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWDN-------------------P--------DLDEWVQALDQAIDA 52 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--TS-----------------------------HHHHHHHHHHCCHC
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccCC-------------------C--------CHHHHHHHHHHHHhh
Confidence 6899999999767787755 567666 7777665422 1 466677777777766
Q ss_pred hCCccEEEEEeChhHHHHHHHH-HhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhh
Q psy4974 175 LGVCKVSLFGWCDGGHLSFVFS-MKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITG 253 (345)
Q Consensus 175 ~~~~~i~lvGhS~Gg~ia~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (345)
.. +++++||||+|+..++.++ .....+|++++|++|+....... ......
T Consensus 53 ~~-~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~-----~~~~~~----------------------- 103 (171)
T PF06821_consen 53 ID-EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEP-----FPPELD----------------------- 103 (171)
T ss_dssp -T-TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHC-----CTCGGC-----------------------
T ss_pred cC-CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccc-----hhhhcc-----------------------
Confidence 54 5799999999999999999 66778999999999975420000 000000
Q ss_pred hHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCccccc
Q psy4974 254 IFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIK 326 (345)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 326 (345)
.. .......+.+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+...+
T Consensus 104 -----------------~f-~~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 104 -----------------GF-TPLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp -----------------CC-TTSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSGGG
T ss_pred -----------------cc-ccCcccccCCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCccccc
Confidence 00 00112234567799999999999999999999998 89999999999987654
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-12 Score=105.55 Aligned_cols=177 Identities=16% Similarity=0.152 Sum_probs=110.1
Q ss_pred EEEEcCcCCCchhhHH--HHHHhhCCCC--eEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 96 LFFTYGVLGEIRNSFK--KQLTAFDPKL--FTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 96 vv~lHG~~~~~~~~~~--~~~~~L~~~G--~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
|+++||+.+++ .+.. .+.+.+++.+ ..+.++|++. ...+..+.+.++
T Consensus 2 ilYlHGF~Ssp-~S~Ka~~l~~~~~~~~~~~~~~~p~l~~----------------------------~p~~a~~~l~~~ 52 (187)
T PF05728_consen 2 ILYLHGFNSSP-QSFKAQALKQYFAEHGPDIQYPCPDLPP----------------------------FPEEAIAQLEQL 52 (187)
T ss_pred eEEecCCCCCC-CCHHHHHHHHHHHHhCCCceEECCCCCc----------------------------CHHHHHHHHHHH
Confidence 79999999985 4443 3445565543 5677777666 334456777888
Q ss_pred HHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchh
Q psy4974 172 LKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYI 251 (345)
Q Consensus 172 l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (345)
++....+.+.|+|.||||+.|..+|.+++ +++ |+++|+..+...... .++......
T Consensus 53 i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~---------------------~iG~~~~~~ 108 (187)
T PF05728_consen 53 IEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQD---------------------YIGEQTNPY 108 (187)
T ss_pred HHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHH---------------------hhCccccCC
Confidence 88887777999999999999999999885 445 899997764322111 111110000
Q ss_pred -hhhH---HHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 252 -TGIF---NQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 252 -~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
...+ ......+.. . ......-..++++++++.|.+++.+.+ .+.+.++..++.+|++|-+. +
T Consensus 109 ~~e~~~~~~~~~~~l~~----l-----~~~~~~~~~~~lvll~~~DEvLd~~~a---~~~~~~~~~~i~~ggdH~f~--~ 174 (187)
T PF05728_consen 109 TGESYELTEEHIEELKA----L-----EVPYPTNPERYLVLLQTGDEVLDYREA---VAKYRGCAQIIEEGGDHSFQ--D 174 (187)
T ss_pred CCccceechHhhhhcce----E-----eccccCCCccEEEEEecCCcccCHHHH---HHHhcCceEEEEeCCCCCCc--c
Confidence 0000 001111000 0 001123357999999999999997544 33344556667788999764 4
Q ss_pred hHHHHHHHHHHH
Q psy4974 328 GQVFNEISRNFI 339 (345)
Q Consensus 328 ~~~~~~~i~~fl 339 (345)
-++....|.+|+
T Consensus 175 f~~~l~~i~~f~ 186 (187)
T PF05728_consen 175 FEEYLPQIIAFL 186 (187)
T ss_pred HHHHHHHHHHhh
Confidence 567777888886
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.6e-13 Score=124.00 Aligned_cols=110 Identities=13% Similarity=0.057 Sum_probs=81.5
Q ss_pred EcCCCCceEEEEcCcCCCc-hhhHHH-HHHhhC--CCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHH
Q psy4974 88 KYGSGAQVLFFTYGVLGEI-RNSFKK-QLTAFD--PKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEE 163 (345)
Q Consensus 88 ~~g~~~p~vv~lHG~~~~~-~~~~~~-~~~~L~--~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~ 163 (345)
......|++|++||++++. ...|.. ++..|. +..++|+++|++| +|.+..+... .....
T Consensus 36 ~Fn~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g-------------~g~s~y~~a~----~~t~~ 98 (442)
T TIGR03230 36 NFNHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLS-------------RAQQHYPTSA----AYTKL 98 (442)
T ss_pred CcCCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCC-------------cCCCCCcccc----ccHHH
Confidence 3444568999999998753 256775 555553 2249999999999 9987544321 12344
Q ss_pred HHHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 164 DVDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 164 ~~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.++++.++++.+ +.++++|+||||||.+|..++...|++|.++++++|+..
T Consensus 99 vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 99 VGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred HHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 455566665543 367999999999999999999999999999999999754
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.5e-14 Score=121.59 Aligned_cols=117 Identities=10% Similarity=0.028 Sum_probs=82.7
Q ss_pred CceEEEEEcCCCCceEEEEcCcCCCchhhHHH-HHH-hhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCc
Q psy4974 81 GCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKK-QLT-AFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPF 158 (345)
Q Consensus 81 g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~-~~~-~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~ 158 (345)
+..+.+.......|++|++||++++....|.. +.. .|...+++|+++|+++ ++.+..+. ..
T Consensus 24 ~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~-------------~~~~~y~~----a~ 86 (275)
T cd00707 24 PSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGR-------------GANPNYPQ----AV 86 (275)
T ss_pred hhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECcc-------------ccccChHH----HH
Confidence 45666666777778999999999884256654 344 3444569999999999 73322111 11
Q ss_pred cchHHHHHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 159 QYIEEDVDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 159 ~~~~~~~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.......+++.++++.+ +.++++++||||||.+|..++.++|++|+++++++|+..
T Consensus 87 ~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 87 NNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 12333344444444443 346899999999999999999999999999999998755
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.9e-13 Score=106.40 Aligned_cols=241 Identities=12% Similarity=0.106 Sum_probs=141.0
Q ss_pred EcCceEEEEEcCC-CC-ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 79 IKGCDIRFIKYGS-GA-QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 79 ~~g~~l~~~~~g~-~~-p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
.||+.+....+.. ++ +-.+++-|..+-.+..|+.++..++..||.|+.+|+|| .|.|.+....-
T Consensus 13 ~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG-------------~g~S~p~~~~~- 78 (281)
T COG4757 13 PDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRG-------------IGQSRPASLSG- 78 (281)
T ss_pred CCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEeccc-------------ccCCCcccccc-
Confidence 3777777665532 22 33555555555546889999999999999999999999 99997654321
Q ss_pred CccchHHHHH-HHHHHHH----HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhc--
Q psy4974 157 PFQYIEEDVD-IAYELLK----LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRL-- 229 (345)
Q Consensus 157 ~~~~~~~~~~-~~~~~l~----~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-- 229 (345)
....+.+++. |+.+.++ .+.-.+...+|||+||.+.-.+. +++ +..+....+........... .+.+...
T Consensus 79 ~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~-~~~l~~~~l 155 (281)
T COG4757 79 SQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGL-RERLGAVLL 155 (281)
T ss_pred CccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccchhh-hhcccceee
Confidence 1113333322 3333333 33445899999999998765554 344 55555555554442221111 0111111
Q ss_pred --------cCCChhhHHHHHHHcccCCchhhh---hHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCCh
Q psy4974 230 --------SNWSPMARSEVLKAYDNDVNYITG---IFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST 298 (345)
Q Consensus 230 --------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~ 298 (345)
..|...+...+ ++...+.... .|..|...-...+.......+.+....+++|+.++...+|+.+|+
T Consensus 156 ~~lv~p~lt~w~g~~p~~l---~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~ 232 (281)
T COG4757 156 WNLVGPPLTFWKGYMPKDL---LGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPP 232 (281)
T ss_pred ccccccchhhccccCcHhh---cCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCH
Confidence 11111111111 1111112222 233333222222222222234556677899999999999999999
Q ss_pred HHHHHHHhhcCCcE--EEEeCC----CCCcccccCh-HHHHHHHHHHH
Q psy4974 299 QQVQSLLNQLKFCQ--YYQFSS----GGHSCHIKHG-QVFNEISRNFI 339 (345)
Q Consensus 299 ~~~~~~~~~~~~~~--~~~~~~----~gH~~~~~~~-~~~~~~i~~fl 339 (345)
...+.+.+..+++. ...++. -||+-..-++ |.+.+.+.+|+
T Consensus 233 As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 233 ASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 99999999887764 444443 4999887776 77888888776
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.7e-12 Score=123.45 Aligned_cols=211 Identities=17% Similarity=0.153 Sum_probs=130.9
Q ss_pred EcCceEEE-EEc------CCCCceEEEEcCcCCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 79 IKGCDIRF-IKY------GSGAQVLFFTYGVLGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 79 ~~g~~l~~-~~~------g~~~p~vv~lHG~~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
.||.+|.+ ..+ ....|+||++||+.+.+ ...|......|.++||.|+.++.|| ++++|..-.
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RG----------s~g~G~~w~ 493 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRG----------GGELGQQWY 493 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCC----------CCccCHHHH
Confidence 48888775 222 12348999999988763 2446666678888999999999999 444554311
Q ss_pred CC--CCCCCccchHHHHHHHHHHHHHh--CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh
Q psy4974 151 KG--RSFVPFQYIEEDVDIAYELLKLL--GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM 226 (345)
Q Consensus 151 ~~--~~~~~~~~~~~~~~~~~~~l~~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 226 (345)
.. ... ...++++.++.+..+++.- ..+++.+.|.|.||+++..++.++|++++++|+..|..........
T Consensus 494 ~~g~~~~-k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~----- 567 (686)
T PRK10115 494 EDGKFLK-KKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLD----- 567 (686)
T ss_pred Hhhhhhc-CCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhccc-----
Confidence 11 111 1235556666565555542 2358999999999999999999999999999999887653211000
Q ss_pred HhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCC-EEEEEeCCCCCCChHHHHHHH
Q psy4974 227 RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVP-VLVFHSADDVMVSTQQVQSLL 305 (345)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vl~i~G~~D~~v~~~~~~~~~ 305 (345)
..+.. ..... ..++.. .. ......+..+ .+...+.+++.| +|+++|.+|..||+..+.++.
T Consensus 568 ~~~p~----~~~~~-~e~G~p--~~--------~~~~~~l~~~---SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~ 629 (686)
T PRK10115 568 ESIPL----TTGEF-EEWGNP--QD--------PQYYEYMKSY---SPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWV 629 (686)
T ss_pred CCCCC----ChhHH-HHhCCC--CC--------HHHHHHHHHc---CchhccCccCCCceeEEecCCCCCcCchHHHHHH
Confidence 00000 00011 111111 00 0011111111 123445667889 567799999999999888888
Q ss_pred hhcC----CcEEEEe---CCCCCcc
Q psy4974 306 NQLK----FCQYYQF---SSGGHSC 323 (345)
Q Consensus 306 ~~~~----~~~~~~~---~~~gH~~ 323 (345)
..+. +.+.+++ +++||..
T Consensus 630 a~Lr~~~~~~~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 630 AKLRELKTDDHLLLLCTDMDSGHGG 654 (686)
T ss_pred HHHHhcCCCCceEEEEecCCCCCCC
Confidence 7763 4566777 8999984
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-11 Score=93.54 Aligned_cols=189 Identities=14% Similarity=0.106 Sum_probs=129.0
Q ss_pred CCCCceEEEEcCcCCCch-hhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 90 GSGAQVLFFTYGVLGEIR-NSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 90 g~~~p~vv~lHG~~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
|+..-+||+-||.+++.. ......+..|+..|+.|..+++|. +..++.|...+++.. -..-.++...+
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpY--------ma~Rrtg~rkPp~~~---~t~~~~~~~~~ 79 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPY--------MAARRTGRRKPPPGS---GTLNPEYIVAI 79 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecch--------hhhccccCCCCcCcc---ccCCHHHHHHH
Confidence 333348899999988731 456678889999999999999876 333334533333321 11234456666
Q ss_pred HHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCC
Q psy4974 169 YELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDV 248 (345)
Q Consensus 169 ~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (345)
.++...+.-.+.++-|+||||.++.+++...-..|+++++++=+...+....+
T Consensus 80 aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~--------------------------- 132 (213)
T COG3571 80 AQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQ--------------------------- 132 (213)
T ss_pred HHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCccc---------------------------
Confidence 67777776669999999999999999988765569999999865443321100
Q ss_pred chhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccc---
Q psy4974 249 NYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHI--- 325 (345)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~--- 325 (345)
.-.+.+..+++|+|+++|+.|++-..+...... ..+..++++++++.|..--
T Consensus 133 ------------------------~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~-ls~~iev~wl~~adHDLkp~k~ 187 (213)
T COG3571 133 ------------------------LRTEHLTGLKTPTLITQGTRDEFGTRDEVAGYA-LSDPIEVVWLEDADHDLKPRKL 187 (213)
T ss_pred ------------------------chhhhccCCCCCeEEeecccccccCHHHHHhhh-cCCceEEEEeccCccccccccc
Confidence 004457788999999999999987755442222 2256799999999997422
Q ss_pred -------cChHHHHHHHHHHHHh
Q psy4974 326 -------KHGQVFNEISRNFILE 341 (345)
Q Consensus 326 -------~~~~~~~~~i~~fl~~ 341 (345)
++-...++.|..|+..
T Consensus 188 vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 188 VSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred cccccHHHHHHHHHHHHHHHHhh
Confidence 2334566777777764
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.4e-12 Score=101.80 Aligned_cols=223 Identities=13% Similarity=0.177 Sum_probs=114.9
Q ss_pred eeeEEE-cCceEEEEEcCC------CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCC-
Q psy4974 74 EGFFSI-KGCDIRFIKYGS------GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGY- 145 (345)
Q Consensus 74 ~~~~~~-~g~~l~~~~~g~------~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~- 145 (345)
.+.+.+ +|..|+..+..+ ..++||+-+|++-.. ..|..++.+|+.+||+|+.+|.-. |
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrm-dh~agLA~YL~~NGFhViRyDsl~-------------Hv 69 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRM-DHFAGLAEYLSANGFHVIRYDSLN-------------HV 69 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGG-GGGHHHHHHHHTTT--EEEE---B---------------
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHH-HHHHHHHHHHhhCCeEEEeccccc-------------cc
Confidence 456666 778888766532 236899999998885 999999999999999999999776 5
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHH
Q psy4974 146 GQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEG 225 (345)
Q Consensus 146 G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 225 (345)
|.|+..-..| ++....+....+.++++..|..++.|+.-|+.|-+|+..|.+. .+.-+|..-+.........+.+..
T Consensus 70 GlSsG~I~ef-tms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~TLe~al~~ 146 (294)
T PF02273_consen 70 GLSSGDINEF-TMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDTLEKALGY 146 (294)
T ss_dssp ------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHHHHHHSS
T ss_pred cCCCCChhhc-chHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHHHHHHhcc
Confidence 8898877777 6555556666677778888889999999999999999999853 366666655544432221111100
Q ss_pred hHhccCCChhhHHHHHHHcccCCchhhh--hHHHHHH-HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHH
Q psy4974 226 MRRLSNWSPMARSEVLKAYDNDVNYITG--IFNQYVD-MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQ 302 (345)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~ 302 (345)
.-+..+.... +...++..- ..+.+.. .+...+. ........++.+.+|++.+++++|.+|......
T Consensus 147 -Dyl~~~i~~l--------p~dldfeGh~l~~~vFv~dc~e~~w~--~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~ 215 (294)
T PF02273_consen 147 -DYLQLPIEQL--------PEDLDFEGHNLGAEVFVTDCFEHGWD--DLDSTINDMKRLSIPFIAFTANDDDWVKQSEVE 215 (294)
T ss_dssp --GGGS-GGG----------SEEEETTEEEEHHHHHHHHHHTT-S--SHHHHHHHHTT--S-EEEEEETT-TTS-HHHHH
T ss_pred -chhhcchhhC--------CCcccccccccchHHHHHHHHHcCCc--cchhHHHHHhhCCCCEEEEEeCCCccccHHHHH
Confidence 0000000000 000000000 0001111 1111110 011124456778999999999999999999888
Q ss_pred HHHhhcC--CcEEEEeCCCCCccc
Q psy4974 303 SLLNQLK--FCQYYQFSSGGHSCH 324 (345)
Q Consensus 303 ~~~~~~~--~~~~~~~~~~gH~~~ 324 (345)
++...+. .++++.++|++|..-
T Consensus 216 ~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 216 ELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp HHHTT-TT--EEEEEETT-SS-TT
T ss_pred HHHHhcCCCceeEEEecCccchhh
Confidence 8888663 578899999999765
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >KOG2624|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.4e-12 Score=112.28 Aligned_cols=265 Identities=13% Similarity=0.070 Sum_probs=153.3
Q ss_pred CCcceeeeEEE-cCceEEEEEc--C-CCCceEEEEcCcCCCchhhHHH------HHHhhCCCCeEEEEeCCCCchhhhcc
Q psy4974 69 QDVFTEGFFSI-KGCDIRFIKY--G-SGAQVLFFTYGVLGEIRNSFKK------QLTAFDPKLFTSIFWDPPGNVVLYLL 138 (345)
Q Consensus 69 ~~~~~~~~~~~-~g~~l~~~~~--g-~~~p~vv~lHG~~~~~~~~~~~------~~~~L~~~G~~vi~~D~~G~~~~~~~ 138 (345)
+.+.+++.++. ||+-+..... + ..+|+|++.||+.+++ ..|.. ++-.|+++||+|+.-+.|| +.|.+
T Consensus 45 gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS-~~Wv~n~p~~sLaf~LadaGYDVWLgN~RG--n~ySr 121 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASS-SSWVLNGPEQSLAFLLADAGYDVWLGNNRG--NTYSR 121 (403)
T ss_pred CCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeecccccc-ccceecCccccHHHHHHHcCCceeeecCcC--cccch
Confidence 45555666655 8886665543 2 4458999999999996 88843 4556889999999999999 33333
Q ss_pred CCccCCCCCC-CCCCCCCCCccchHHH-----HHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCc---ccceeeEe
Q psy4974 139 GKTCSGYGQS-LPKGRSFVPFQYIEED-----VDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH---MVHKLVIW 209 (345)
Q Consensus 139 g~~~~~~G~s-~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~ 209 (345)
.+.. ...+ ...-..| ++.++ .+.+.-+++.-+.++++.+|||.|+.....++...|+ +|+.++++
T Consensus 122 ~h~~--l~~~~~~~FW~F----S~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aL 195 (403)
T KOG2624|consen 122 KHKK--LSPSSDKEFWDF----SWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIAL 195 (403)
T ss_pred hhcc--cCCcCCcceeec----chhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeee
Confidence 3320 1111 1112223 34443 3334444555577899999999999999998888765 79999999
Q ss_pred ccCCCCCch---hHHHHHH-------hHhccCCCh-----hhHHHHHHHcccCCchhhh---------------hHHHH-
Q psy4974 210 GTKSFLTID---NVRVFEG-------MRRLSNWSP-----MARSEVLKAYDNDVNYITG---------------IFNQY- 258 (345)
Q Consensus 210 ~~~~~~~~~---~~~~~~~-------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~---------------~~~~~- 258 (345)
+|+...... ....... +..+..... ...+.+............. .+...
T Consensus 196 AP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~ 275 (403)
T KOG2624|consen 196 APAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTL 275 (403)
T ss_pred cchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcc
Confidence 998854311 1111100 111111000 0000011111110000000 00000
Q ss_pred -------------HHHHHHHHH--------------------hhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHH
Q psy4974 259 -------------VDMVNLIFK--------------------SYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLL 305 (345)
Q Consensus 259 -------------~~~~~~~~~--------------------~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~ 305 (345)
.+.+..+.. ......+...+.++++|+.+.+|++|.++.++....+.
T Consensus 276 ~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~ 355 (403)
T KOG2624|consen 276 LPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILL 355 (403)
T ss_pred cchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHH
Confidence 011111110 00111233446678999999999999999999999888
Q ss_pred hhcCCcEEEE---eCCCCCcccc---cChHHHHHHHHHHHHhh
Q psy4974 306 NQLKFCQYYQ---FSSGGHSCHI---KHGQVFNEISRNFILEE 342 (345)
Q Consensus 306 ~~~~~~~~~~---~~~~gH~~~~---~~~~~~~~~i~~fl~~~ 342 (345)
...+++.... +++=.|.-++ +-++++.+.|.+.++..
T Consensus 356 ~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 356 LVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLF 398 (403)
T ss_pred HhcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhh
Confidence 8877654422 6777886444 45889999999888754
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.7e-12 Score=106.72 Aligned_cols=239 Identities=13% Similarity=0.042 Sum_probs=135.3
Q ss_pred eEEEcCceEEEEE----cC-CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 76 FFSIKGCDIRFIK----YG-SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 76 ~~~~~g~~l~~~~----~g-~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
+...+|.+|.-.. .+ ...|.||-.||.+++. ..|..++. ++..||.|+.+|.||++.... -..++..|.+.+
T Consensus 61 f~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~-g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~-dt~~~p~~~s~p 137 (321)
T COG3458 61 FTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRG-GEWHDMLH-WAVAGYAVFVMDVRGQGSSSQ-DTADPPGGPSDP 137 (321)
T ss_pred EeccCCceEEEEEEeecccCCccceEEEEeeccCCC-CCcccccc-ccccceeEEEEecccCCCccc-cCCCCCCCCcCC
Confidence 3344666666332 22 2338999999999995 78877664 556689999999999322211 000011111100
Q ss_pred -------C--CCCCCCccchHHHHHHHHHH--HHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh
Q psy4974 151 -------K--GRSFVPFQYIEEDVDIAYEL--LKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN 219 (345)
Q Consensus 151 -------~--~~~~~~~~~~~~~~~~~~~~--l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 219 (345)
. ...|.-..-+.+.++.+..+ +.....++|.+.|.|.||.+++.+++..| +|+++++.-|...--+..
T Consensus 138 G~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r~ 216 (321)
T COG3458 138 GFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPRA 216 (321)
T ss_pred ceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchhh
Confidence 0 01110011122223333222 22234468999999999999999988775 799998887754311100
Q ss_pred HHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH
Q psy4974 220 VRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ 299 (345)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~ 299 (345)
+..........+...+.... ..-...+......+..+...++++|+|+..|-.|+++|+.
T Consensus 217 ---------i~~~~~~~ydei~~y~k~h~-----------~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPs 276 (321)
T COG3458 217 ---------IELATEGPYDEIQTYFKRHD-----------PKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPS 276 (321)
T ss_pred ---------eeecccCcHHHHHHHHHhcC-----------chHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCCh
Confidence 00001111112222222210 0011222222333445556788999999999999999999
Q ss_pred HHHHHHhhcCC-cEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 300 QVQSLLNQLKF-CQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 300 ~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
..-...+.++. .++.+++.-+|.-. |.-..+.+..|++.
T Consensus 277 tqFA~yN~l~~~K~i~iy~~~aHe~~---p~~~~~~~~~~l~~ 316 (321)
T COG3458 277 TQFAAYNALTTSKTIEIYPYFAHEGG---PGFQSRQQVHFLKI 316 (321)
T ss_pred hhHHHhhcccCCceEEEeeccccccC---cchhHHHHHHHHHh
Confidence 99999998874 56677776677544 44555556667654
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.4e-12 Score=121.09 Aligned_cols=111 Identities=18% Similarity=0.187 Sum_probs=86.2
Q ss_pred eeeEEEcCceEEEEEcCCCC----------ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGA----------QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCS 143 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~----------p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~ 143 (345)
..++..++..+.|...+.+. |+||++||++++ ...|..+++.|.++||+|+++|+||
T Consensus 420 ~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~-~~~~~~lA~~La~~Gy~VIaiDlpG------------ 486 (792)
T TIGR03502 420 VLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGA-KENALAFAGTLAAAGVATIAIDHPL------------ 486 (792)
T ss_pred eEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCC-HHHHHHHHHHHHhCCcEEEEeCCCC------------
Confidence 35556688888777755442 489999999999 4999999999998899999999999
Q ss_pred CCCCCCCC---------CC---CCCC-------ccchHHHHHHHHHHHHHhC----------------CccEEEEEeChh
Q psy4974 144 GYGQSLPK---------GR---SFVP-------FQYIEEDVDIAYELLKLLG----------------VCKVSLFGWCDG 188 (345)
Q Consensus 144 ~~G~s~~~---------~~---~~~~-------~~~~~~~~~~~~~~l~~~~----------------~~~i~lvGhS~G 188 (345)
||.|... .. .|.. .+.+.+.+.|+..+...++ ..+++++|||||
T Consensus 487 -HG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLG 565 (792)
T TIGR03502 487 -HGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLG 565 (792)
T ss_pred -CCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHH
Confidence 8888432 11 1101 1467888888888877765 248999999999
Q ss_pred HHHHHHHHHh
Q psy4974 189 GHLSFVFSMK 198 (345)
Q Consensus 189 g~ia~~~a~~ 198 (345)
|.+++.++..
T Consensus 566 giig~~~~~~ 575 (792)
T TIGR03502 566 GIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHh
Confidence 9999999875
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >KOG2565|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.4e-11 Score=104.11 Aligned_cols=123 Identities=22% Similarity=0.215 Sum_probs=98.6
Q ss_pred eeEEEcCceEEEEEcCCC-------CceEEEEcCcCCCchhhHHHHHHhhCCC---C------eEEEEeCCCCchhhhcc
Q psy4974 75 GFFSIKGCDIRFIKYGSG-------AQVLFFTYGVLGEIRNSFKKQLTAFDPK---L------FTSIFWDPPGNVVLYLL 138 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~~-------~p~vv~lHG~~~~~~~~~~~~~~~L~~~---G------~~vi~~D~~G~~~~~~~ 138 (345)
-..++.|.+||+...... ..|++++|||+|+. +.|..+++.|.+. | |.|+++.+||
T Consensus 127 ykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv-~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPG------- 198 (469)
T KOG2565|consen 127 YKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSV-REFYKFIPLLTDPKRHGNESDYAFEVIAPSLPG------- 198 (469)
T ss_pred hhhhhcceeEEEEEecCCccccCCcccceEEecCCCchH-HHHHhhhhhhcCccccCCccceeEEEeccCCCC-------
Confidence 345678999998865321 14899999999995 8888888888654 3 8999999999
Q ss_pred CCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 139 GKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 139 g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
+|.|+.+... .+ ...+.|.-+..++-.+|.+++.|-|-.||+.|+..+|..+|+.|.++-+--+...
T Consensus 199 ------ygwSd~~sk~--GF-n~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~ 265 (469)
T KOG2565|consen 199 ------YGWSDAPSKT--GF-NAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVN 265 (469)
T ss_pred ------cccCcCCccC--Cc-cHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccC
Confidence 9999877542 22 4556677778888899999999999999999999999999999998876555433
|
|
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.5e-12 Score=108.64 Aligned_cols=224 Identities=16% Similarity=0.144 Sum_probs=83.5
Q ss_pred ceEEEEcCcCCCc--hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEI--RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 94 p~vv~lHG~~~~~--~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
..||||.|++..- -.....+++.|.+.||.|+-+.++. +-.|+|.+ +++.+++++.++
T Consensus 34 ~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsS---------Sy~G~G~~-----------SL~~D~~eI~~~ 93 (303)
T PF08538_consen 34 NALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSS---------SYSGWGTS-----------SLDRDVEEIAQL 93 (303)
T ss_dssp SEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GG---------GBTTS-S-------------HHHHHHHHHHH
T ss_pred cEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecC---------ccCCcCcc-----------hhhhHHHHHHHH
Confidence 4899999988752 2446778899988889999998765 11114433 677777777766
Q ss_pred HHH---h-----CCccEEEEEeChhHHHHHHHHHhCC-----cccceeeEeccCCCCCchhHH-----HHHHh----Hhc
Q psy4974 172 LKL---L-----GVCKVSLFGWCDGGHLSFVFSMKYP-----HMVHKLVIWGTKSFLTIDNVR-----VFEGM----RRL 229 (345)
Q Consensus 172 l~~---~-----~~~~i~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~-----~~~~~----~~~ 229 (345)
++. . +.++|+|+|||.|+.-+++|+.... ..|+++||-+|.......... .+..+ +.+
T Consensus 94 v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~ 173 (303)
T PF08538_consen 94 VEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKEL 173 (303)
T ss_dssp HHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHH
T ss_pred HHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHH
Confidence 654 3 3568999999999999999987652 569999999998764322211 11111 100
Q ss_pred ---cCCChhhHHHHHHHcccCCchhhhhHHHHHH-----HHHHHH-HhhCchhhhccCCCCCCCEEEEEeCCCCCCChH-
Q psy4974 230 ---SNWSPMARSEVLKAYDNDVNYITGIFNQYVD-----MVNLIF-KSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ- 299 (345)
Q Consensus 230 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~- 299 (345)
.+....+..........+ .+-...+|.. .-..++ .......+...+..+.+|+|++.+.+|..||..
T Consensus 174 i~~g~~~~~lp~~~~~~~~~~---~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~v 250 (303)
T PF08538_consen 174 IAEGKGDEILPREFTPLVFYD---TPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWV 250 (303)
T ss_dssp HHCT-TT-GG----GGTTT-S---S---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT------
T ss_pred HHcCCCCceeeccccccccCC---CcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccc
Confidence 000000000000000000 0000011110 000111 112223445667788899999999999999864
Q ss_pred HHHHHHhhcCC--------cEEEEeCCCCCcccccCh----HHHHHHHHHHHH
Q psy4974 300 QVQSLLNQLKF--------CQYYQFSSGGHSCHIKHG----QVFNEISRNFIL 340 (345)
Q Consensus 300 ~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~~----~~~~~~i~~fl~ 340 (345)
..+.+.+++.. ..-.++||++|.+--+.. +.+.+.+..||+
T Consensus 251 dk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 251 DKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -----------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 22334443321 124589999999865432 357788888874
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >KOG3043|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.1e-11 Score=99.22 Aligned_cols=196 Identities=19% Similarity=0.147 Sum_probs=134.1
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC-CC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP-KG 152 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~-~~ 152 (345)
....+++|.+-++.-..+.+..||+|--+.|.....-+..+..++.+||.|+.+|+-. | --.+.. ..
T Consensus 20 g~~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~-------G-----dp~~~~~~~ 87 (242)
T KOG3043|consen 20 GREEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFR-------G-----DPWSPSLQK 87 (242)
T ss_pred CceEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhc-------C-----CCCCCCCCh
Confidence 3455677777776655555557888888777754557888999999999999999855 1 101110 00
Q ss_pred -------CCCCCccchHHHHHHHHHHHHHhC-CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHH
Q psy4974 153 -------RSFVPFQYIEEDVDIAYELLKLLG-VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFE 224 (345)
Q Consensus 153 -------~~~~~~~~~~~~~~~~~~~l~~~~-~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 224 (345)
... +..........+..+++.-+ ..+|.++|+||||-++..+....| .+.+.+.+-|....
T Consensus 88 ~~~~~w~~~~-~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d--------- 156 (242)
T KOG3043|consen 88 SERPEWMKGH-SPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD--------- 156 (242)
T ss_pred hhhHHHHhcC-CcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC---------
Confidence 011 11122333445555566555 568999999999999998888877 67777777664331
Q ss_pred HhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHH
Q psy4974 225 GMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSL 304 (345)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~ 304 (345)
......+++|++++.|+.|.++|++....+
T Consensus 157 --------------------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ 186 (242)
T KOG3043|consen 157 --------------------------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAW 186 (242)
T ss_pred --------------------------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHH
Confidence 223456789999999999999999888887
Q ss_pred HhhcC-----CcEEEEeCCCCCcccc-----cCh------HHHHHHHHHHHHhh
Q psy4974 305 LNQLK-----FCQYYQFSSGGHSCHI-----KHG------QVFNEISRNFILEE 342 (345)
Q Consensus 305 ~~~~~-----~~~~~~~~~~gH~~~~-----~~~------~~~~~~i~~fl~~~ 342 (345)
.+.+. ..++.+|++.+|-++. +.| ++..+.+..||+..
T Consensus 187 ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 187 EEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred HHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 77764 2478999999997663 233 34556677777654
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.41 E-value=5e-12 Score=120.42 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=84.2
Q ss_pred cCceEEEEEc---CC-CCceEEEEcCcCCCch--hhH-HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 80 KGCDIRFIKY---GS-GAQVLFFTYGVLGEIR--NSF-KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 80 ~g~~l~~~~~---g~-~~p~vv~lHG~~~~~~--~~~-~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
+|.+|++..+ +. ..|+||++||++.+.. ..+ ......|.++||.|+++|+|| +|.|....
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG-------------~g~S~g~~ 71 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRG-------------RGASEGEF 71 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccc-------------cccCCCce
Confidence 6777875443 22 3379999999987631 112 224467888899999999999 99997553
Q ss_pred CCCCCccchHHHHHHHHHHHHHhC-----CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLLG-----VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~-----~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
..+ . ...++|+.++++.+. ..++.++|||+||.+++.+|..+|+.++++|..++...
T Consensus 72 ~~~-~----~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 72 DLL-G----SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred Eec-C----cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 322 2 234555555555442 24899999999999999999999999999998887654
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.5e-12 Score=105.81 Aligned_cols=214 Identities=18% Similarity=0.140 Sum_probs=121.6
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhC-CCC--eEEEEeCCCCchhhhccCCccCCCCCCCCCC--CCCC-Cc-cchHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFD-PKL--FTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG--RSFV-PF-QYIEEDVD 166 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~-~~G--~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~--~~~~-~~-~~~~~~~~ 166 (345)
.|.||+||++++. ..+..++..+. +.| -.++.++.--.|.+.+.|.- ......|- -.|. .. .++...+.
T Consensus 12 tPTifihG~~gt~-~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~---~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 12 TPTIFIHGYGGTA-NSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKL---SKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp EEEEEE--TTGGC-CCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES------TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CcEEEECCCCCCh-hHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeec---CCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 5899999999994 99999999996 654 34444444344466666665 22222111 0000 11 25666677
Q ss_pred HHHHHHHHh----CCccEEEEEeChhHHHHHHHHHhCCc-----ccceeeEeccCCCCCchhHHHHHHhHhccCCChhhH
Q psy4974 167 IAYELLKLL----GVCKVSLFGWCDGGHLSFVFSMKYPH-----MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMAR 237 (345)
Q Consensus 167 ~~~~~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (345)
++..++..+ +++++.+|||||||..++.++..+.. .+.++|.++++............ ...+..-.+
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~-~~~~~~~gp--- 163 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQN-QNDLNKNGP--- 163 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TT-TT-CSTT-B---
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccch-hhhhcccCC---
Confidence 777666655 67899999999999999999887531 58999999986653211100000 000000000
Q ss_pred HHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeC------CCCCCChHHHHHHHhhcCC-
Q psy4974 238 SEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSA------DDVMVSTQQVQSLLNQLKF- 310 (345)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~------~D~~v~~~~~~~~~~~~~~- 310 (345)
.. ....+..+.... ...++ -++.||-|.|+ .|..||...+..+...+.+
T Consensus 164 ---------------~~---~~~~y~~l~~~~-----~~~~p-~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~ 219 (255)
T PF06028_consen 164 ---------------KS---MTPMYQDLLKNR-----RKNFP-KNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNR 219 (255)
T ss_dssp ---------------SS-----HHHHHHHHTH-----GGGST-TT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTT
T ss_pred ---------------cc---cCHHHHHHHHHH-----HhhCC-CCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcc
Confidence 00 011111111110 11122 25789999998 7899999988888877753
Q ss_pred ---cEEEEeCC--CCCcccccChHHHHHHHHHHHH
Q psy4974 311 ---CQYYQFSS--GGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 311 ---~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.+-.++.| +.|.-..|++ ++.+.|.+||=
T Consensus 220 ~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 220 AKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp SSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred cCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 34455654 6898777754 77799999983
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.2e-10 Score=100.13 Aligned_cols=214 Identities=12% Similarity=0.078 Sum_probs=126.7
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCC---CeEEEEeCCCCchhhhccCCccCCCCCCCCCC---CCCCCccchHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPK---LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG---RSFVPFQYIEEDVDI 167 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~---G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~---~~~~~~~~~~~~~~~ 167 (345)
+.+++|+|.+|-. ..|..++..|.+. .+.|+++.+.| |-.++... ... ...+++++++.
T Consensus 3 ~li~~IPGNPGlv-~fY~~Fl~~L~~~l~~~~~i~~ish~G-------------h~~~~~~~~~~~~~-~~~sL~~QI~h 67 (266)
T PF10230_consen 3 PLIVFIPGNPGLV-EFYEEFLSALYEKLNPQFEILGISHAG-------------HSTSPSNSKFSPNG-RLFSLQDQIEH 67 (266)
T ss_pred EEEEEECCCCChH-HHHHHHHHHHHHhCCCCCeeEEecCCC-------------CcCCcccccccCCC-CccCHHHHHHH
Confidence 5799999999995 9999988777633 59999999999 86664431 011 33377777777
Q ss_pred HHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCCCCchhHHH--HHH-h---------
Q psy4974 168 AYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSFLTIDNVRV--FEG-M--------- 226 (345)
Q Consensus 168 ~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~--~~~-~--------- 226 (345)
..++++++ ...+++|+|||.|+++++++..+.+ .+|.+++++-|........... +.. +
T Consensus 68 k~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~~~~~~~~~~~~ 147 (266)
T PF10230_consen 68 KIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTPLLFSPPPLVWL 147 (266)
T ss_pred HHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchhHHHHHHHhhccHHHHH
Confidence 66666654 2348999999999999999999998 7899999998865422211111 111 0
Q ss_pred -----HhccCCChhhHHHHHHHcccCC-chhh---------hhHHHHHHHHHHHHHhhCc---hhhhccCCCCCCCEEEE
Q psy4974 227 -----RRLSNWSPMARSEVLKAYDNDV-NYIT---------GIFNQYVDMVNLIFKSYGR---NVYQELLPYVDVPVLVF 288 (345)
Q Consensus 227 -----~~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~Pvl~i 288 (345)
......+......+...+.... .... ....+.+.....-+..... .........-...+.++
T Consensus 148 ~~~~~~l~~~lP~~~~~~lv~~~~~~~~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~~~d~~~~~~~~~~~~~kl~f~ 227 (266)
T PF10230_consen 148 ASFLSFLLSLLPESVLRWLVRWVMGFPPPAVEATTKFLLSPRVVRQALYMARDEMREIREDDNDELIKHHNENGDKLWFY 227 (266)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHcCCChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHccCcchHHHHHHhccCCCEEEEE
Confidence 0011222223333333322221 0000 0011111111111111111 11122222226789999
Q ss_pred EeCCCCCCChHHHHHHHhhcCC--cEEEEe-CCCCCc
Q psy4974 289 HSADDVMVSTQQVQSLLNQLKF--CQYYQF-SSGGHS 322 (345)
Q Consensus 289 ~G~~D~~v~~~~~~~~~~~~~~--~~~~~~-~~~gH~ 322 (345)
+|.+|.+||.+..+++.+.+++ .++.+- ++..|.
T Consensus 228 fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~~~i~Ha 264 (266)
T PF10230_consen 228 FGQNDHWVPNETRDELIERYPGHEPDVVVDEEGIPHA 264 (266)
T ss_pred EeCCCCCCCHHHHHHHHHHcCCCCCeEEEecCCCCCC
Confidence 9999999999999999999983 333322 455564
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.3e-11 Score=100.87 Aligned_cols=171 Identities=15% Similarity=0.153 Sum_probs=109.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|++||+||+... ...|..++++++..||-|+++|+.. .+.. .... ......+..+++.+=++
T Consensus 18 PVv~f~~G~~~~-~s~Ys~ll~hvAShGyIVV~~d~~~-------------~~~~---~~~~-~~~~~~~vi~Wl~~~L~ 79 (259)
T PF12740_consen 18 PVVLFLHGFLLI-NSWYSQLLEHVASHGYIVVAPDLYS-------------IGGP---DDTD-EVASAAEVIDWLAKGLE 79 (259)
T ss_pred CEEEEeCCcCCC-HHHHHHHHHHHHhCceEEEEecccc-------------cCCC---Ccch-hHHHHHHHHHHHHhcch
Confidence 899999999976 4779999999999999999999655 3321 1111 22233333443332111
Q ss_pred -Hh------CCccEEEEEeChhHHHHHHHHHhC-----CcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHH
Q psy4974 174 -LL------GVCKVSLFGWCDGGHLSFVFSMKY-----PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVL 241 (345)
Q Consensus 174 -~~------~~~~i~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
.+ +..++.|.|||.||-+|..++..+ +.+++++++++|......... ..+..
T Consensus 80 ~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~-----------~~P~v----- 143 (259)
T PF12740_consen 80 SKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQ-----------TEPPV----- 143 (259)
T ss_pred hhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccC-----------CCCcc-----
Confidence 12 344899999999999999999887 558999999999874221100 00000
Q ss_pred HHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCC---------CC-hHHHHHHHhhcC-C
Q psy4974 242 KAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVM---------VS-TQQVQSLLNQLK-F 310 (345)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~---------v~-~~~~~~~~~~~~-~ 310 (345)
..+...--+.++|+++|...-+.. .| -..-+++.+..+ .
T Consensus 144 ------------------------------~~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p 193 (259)
T PF12740_consen 144 ------------------------------LTYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPP 193 (259)
T ss_pred ------------------------------ccCcccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCC
Confidence 000111123468999997776642 22 235666666664 4
Q ss_pred cEEEEeCCCCCcccccCh
Q psy4974 311 CQYYQFSSGGHSCHIKHG 328 (345)
Q Consensus 311 ~~~~~~~~~gH~~~~~~~ 328 (345)
+...+..+.||+-+++..
T Consensus 194 ~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 194 SWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred EEEEEeCCCCchHhhcCC
Confidence 566677899999888655
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.9e-10 Score=89.06 Aligned_cols=172 Identities=12% Similarity=0.059 Sum_probs=116.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHh-hCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTA-FDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~-L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
+.+|++||+.+|+...|....+. |.. +-.+++.. . ....++++++.+.+.+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~~-------------w-----------~~P~~~dWi~~l~~~v 54 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQDD-------------W-----------EAPVLDDWIARLEKEV 54 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccCC-------------C-----------CCCCHHHHHHHHHHHH
Confidence 46899999999977888775532 221 22333323 1 2226777788888777
Q ss_pred HHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhh
Q psy4974 173 KLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYIT 252 (345)
Q Consensus 173 ~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (345)
... .++++||+||+|+.+++.++......|.++++++|+........ ......+.
T Consensus 55 ~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~-----------------~~~~~tf~------- 109 (181)
T COG3545 55 NAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIR-----------------PKHLMTFD------- 109 (181)
T ss_pred hcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccc-----------------hhhccccC-------
Confidence 776 35799999999999999999987778999999999754321000 00000000
Q ss_pred hhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccc---cChH
Q psy4974 253 GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHI---KHGQ 329 (345)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~ 329 (345)
.....+..-|.+++.+.+|++++.+.++.+++.+ +..++...++||.--. ..-.
T Consensus 110 ----------------------~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w-gs~lv~~g~~GHiN~~sG~g~wp 166 (181)
T COG3545 110 ----------------------PIPREPLPFPSVVVASRNDPYVSYEHAEDLANAW-GSALVDVGEGGHINAESGFGPWP 166 (181)
T ss_pred ----------------------CCccccCCCceeEEEecCCCCCCHHHHHHHHHhc-cHhheecccccccchhhcCCCcH
Confidence 1112234569999999999999999999999987 5677788889997433 2234
Q ss_pred HHHHHHHHHHHh
Q psy4974 330 VFNEISRNFILE 341 (345)
Q Consensus 330 ~~~~~i~~fl~~ 341 (345)
+....+.+++.+
T Consensus 167 eg~~~l~~~~s~ 178 (181)
T COG3545 167 EGYALLAQLLSR 178 (181)
T ss_pred HHHHHHHHHhhh
Confidence 555566666554
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2e-10 Score=96.85 Aligned_cols=100 Identities=19% Similarity=0.298 Sum_probs=84.1
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|+|+++|+.+|.. ..|..+...|... ..|+.++.|| ++.-.. ...+++++++...+.+.
T Consensus 1 ~pLF~fhp~~G~~-~~~~~L~~~l~~~-~~v~~l~a~g-------------~~~~~~------~~~~l~~~a~~yv~~Ir 59 (257)
T COG3319 1 PPLFCFHPAGGSV-LAYAPLAAALGPL-LPVYGLQAPG-------------YGAGEQ------PFASLDDMAAAYVAAIR 59 (257)
T ss_pred CCEEEEcCCCCcH-HHHHHHHHHhccC-ceeeccccCc-------------cccccc------ccCCHHHHHHHHHHHHH
Confidence 5899999999995 9999999999998 9999999999 875322 33378888888887777
Q ss_pred HhCC-ccEEEEEeChhHHHHHHHHHhC---CcccceeeEeccCCC
Q psy4974 174 LLGV-CKVSLFGWCDGGHLSFVFSMKY---PHMVHKLVIWGTKSF 214 (345)
Q Consensus 174 ~~~~-~~i~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~ 214 (345)
.... .+++|+|||+||.+|..+|.+. .+.|..++++++...
T Consensus 60 ~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 60 RVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 6643 4999999999999999999874 457999999999877
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.5e-10 Score=121.68 Aligned_cols=207 Identities=14% Similarity=0.057 Sum_probs=124.3
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
++++++||++++. ..|..+.+.|... +.|+++|.|| ++... ... .+++++++++.+.++
T Consensus 1069 ~~l~~lh~~~g~~-~~~~~l~~~l~~~-~~v~~~~~~g-------------~~~~~--~~~----~~l~~la~~~~~~i~ 1127 (1296)
T PRK10252 1069 PTLFCFHPASGFA-WQFSVLSRYLDPQ-WSIYGIQSPR-------------PDGPM--QTA----TSLDEVCEAHLATLL 1127 (1296)
T ss_pred CCeEEecCCCCch-HHHHHHHHhcCCC-CcEEEEECCC-------------CCCCC--CCC----CCHHHHHHHHHHHHH
Confidence 6899999999995 9999999999876 9999999999 87652 222 278888999998888
Q ss_pred HhCC-ccEEEEEeChhHHHHHHHHHh---CCcccceeeEeccCCCCCchhHHH-HHHhH-hccCCChhhHHHHHHHcccC
Q psy4974 174 LLGV-CKVSLFGWCDGGHLSFVFSMK---YPHMVHKLVIWGTKSFLTIDNVRV-FEGMR-RLSNWSPMARSEVLKAYDND 247 (345)
Q Consensus 174 ~~~~-~~i~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 247 (345)
.+.. .+++++|||+||.+|..+|.+ .++++..++++++........... ..... ....................
T Consensus 1128 ~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1207 (1296)
T PRK10252 1128 EQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGS 1207 (1296)
T ss_pred hhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhcc
Confidence 7654 489999999999999999986 477899999998743311000000 00000 00000000000001000000
Q ss_pred CchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 248 VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
............+..... .........+.+|++++.++.|..........+.+...+.+...++ ++|+.++..
T Consensus 1208 --~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~v~-g~H~~~~~~ 1280 (1296)
T PRK10252 1208 --LSTELFTTIEGNYADAVR----LLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWIAELDVYRQD-CAHVDIISP 1280 (1296)
T ss_pred --ccHHHHHHHHHHHHHHHH----HHHhccCCcccCceEEEEcCCCCcccCCcccchhhhcCCCEEEECC-CCHHHHCCc
Confidence 011111111111111111 1111223556789999999998755544444455444566777775 899987754
Q ss_pred h
Q psy4974 328 G 328 (345)
Q Consensus 328 ~ 328 (345)
+
T Consensus 1281 ~ 1281 (1296)
T PRK10252 1281 E 1281 (1296)
T ss_pred H
Confidence 3
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.2e-10 Score=100.72 Aligned_cols=228 Identities=15% Similarity=0.185 Sum_probs=132.2
Q ss_pred CCceEEEEcCcCCCchhhHH--HH-HHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchH------
Q psy4974 92 GAQVLFFTYGVLGEIRNSFK--KQ-LTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIE------ 162 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~--~~-~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~------ 162 (345)
.+|.+|.++|.|+.. .|+ .+ +..|.++|+..+.+..|- ||...+.......+.+..
T Consensus 91 ~rp~~IhLagTGDh~--f~rR~~l~a~pLl~~gi~s~~le~Py-------------yg~RkP~~Q~~s~l~~VsDl~~~g 155 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHG--FWRRRRLMARPLLKEGIASLILENPY-------------YGQRKPKDQRRSSLRNVSDLFVMG 155 (348)
T ss_pred CCceEEEecCCCccc--hhhhhhhhhhHHHHcCcceEEEeccc-------------ccccChhHhhcccccchhHHHHHH
Confidence 357889999998873 442 23 677777799999999999 987754432110111111
Q ss_pred ----HHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHH
Q psy4974 163 ----EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS 238 (345)
Q Consensus 163 ----~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (345)
..+..+..+++..|..++.+.|.||||.+|...|...|..+..+-++++.........-.+ .....|.....+
T Consensus 156 ~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvl---s~~i~W~~L~~q 232 (348)
T PF09752_consen 156 RATILESRALLHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVL---SNSINWDALEKQ 232 (348)
T ss_pred hHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhh---hcCCCHHHHHHH
Confidence 1234455666666888999999999999999999999987777666665433211110000 000011000000
Q ss_pred -------HHHHHcccCCc-------hhhhhHHHHHHHHHHHHHhhCchhhhccC-CCCCCCEEEEEeCCCCCCChHHHHH
Q psy4974 239 -------EVLKAYDNDVN-------YITGIFNQYVDMVNLIFKSYGRNVYQELL-PYVDVPVLVFHSADDVMVSTQQVQS 303 (345)
Q Consensus 239 -------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~Pvl~i~G~~D~~v~~~~~~~ 303 (345)
........... .......+....+...+...... .+.. +.-.-.+.++.+++|.+||......
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l--~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~ 310 (348)
T PF09752_consen 233 FEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHL--TNFPVPVDPSAIIFVAAKNDAYVPRHGVLS 310 (348)
T ss_pred hcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccc--cccCCCCCCCcEEEEEecCceEechhhcch
Confidence 00000000000 00000011112222222221110 1111 1112358999999999999988889
Q ss_pred HHhhcCCcEEEEeCCCCCcc-cccChHHHHHHHHHHHH
Q psy4974 304 LLNQLKFCQYYQFSSGGHSC-HIKHGQVFNEISRNFIL 340 (345)
Q Consensus 304 ~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~ 340 (345)
+.+..|++++..++ +||.. ++-+.+.+.++|.+-++
T Consensus 311 Lq~~WPGsEvR~l~-gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 311 LQEIWPGSEVRYLP-GGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred HHHhCCCCeEEEec-CCcEEEeeechHHHHHHHHHHhh
Confidence 99999999999998 59974 44677888888887664
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.9e-10 Score=112.46 Aligned_cols=211 Identities=13% Similarity=0.079 Sum_probs=118.0
Q ss_pred HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhC----------------
Q psy4974 113 QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLG---------------- 176 (345)
Q Consensus 113 ~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------------- 176 (345)
+.++|.++||.|+..|.|| .|.|+.....+ . .+..++..++++.+.
T Consensus 271 ~~~~~~~rGYaVV~~D~RG-------------tg~SeG~~~~~-~----~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~k 332 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIG-------------TRGSDGCPTTG-D----YQEIESMKAVIDWLNGRATAYTDRTRGKEVK 332 (767)
T ss_pred HHHHHHhCCeEEEEEcCCC-------------CCCCCCcCccC-C----HHHHHHHHHHHHHHhhCCccccccccccccc
Confidence 4578889999999999999 99997653322 1 223334433333332
Q ss_pred ----CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHH-HcccC---C
Q psy4974 177 ----VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLK-AYDND---V 248 (345)
Q Consensus 177 ----~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~ 248 (345)
..+|.++|.|+||.+++.+|...|+.++++|..++.......... .........+.......+.. .+... .
T Consensus 333 q~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~-~G~~~~~~g~~ged~d~l~~~~~~r~~~~~ 411 (767)
T PRK05371 333 ADWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRE-NGLVRAPGGYQGEDLDVLAELTYSRNLLAG 411 (767)
T ss_pred cCCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhc-CCceeccCCcCCcchhhHHHHhhhcccCcc
Confidence 359999999999999999999888889999988776442110000 00000000110000000000 00000 0
Q ss_pred c--hhhhhHHHHHHHHHHHHH--------hhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEE
Q psy4974 249 N--YITGIFNQYVDMVNLIFK--------SYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYY 314 (345)
Q Consensus 249 ~--~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~ 314 (345)
. .....++.....+..... .+...++...+.++++|+|+++|..|..++...+.++.+.+. ..++.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~ 491 (767)
T PRK05371 412 DYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLF 491 (767)
T ss_pred hhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEE
Confidence 0 000111111111111110 011223345567899999999999999999877766666653 34555
Q ss_pred EeCCCCCcccc-cChHHHHHHHHHHHHhhc
Q psy4974 315 QFSSGGHSCHI-KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 315 ~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~ 343 (345)
+. .++|.... ..+.++.+.+.+||....
T Consensus 492 l~-~g~H~~~~~~~~~d~~e~~~~Wfd~~L 520 (767)
T PRK05371 492 LH-QGGHVYPNNWQSIDFRDTMNAWFTHKL 520 (767)
T ss_pred Ee-CCCccCCCchhHHHHHHHHHHHHHhcc
Confidence 44 57886443 345677788888887654
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.4e-11 Score=100.56 Aligned_cols=190 Identities=15% Similarity=0.079 Sum_probs=98.5
Q ss_pred EEEEcCcCCC--chhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 96 LFFTYGVLGE--IRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 96 vv~lHG~~~~--~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
||++||++.. .......++..+++ .|+.|+.+|+|- .. ...+ ...+++..+.+..++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl-------------~p-----~~~~--p~~~~D~~~a~~~l~ 60 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRL-------------AP-----EAPF--PAALEDVKAAYRWLL 60 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE----------------TT-----TSST--THHHHHHHHHHHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccc-------------cc-----cccc--cccccccccceeeec
Confidence 7999998754 12333445566654 799999999988 32 2222 112333333344444
Q ss_pred HH-----hCCccEEEEEeChhHHHHHHHHHhCCc----ccceeeEeccCCCC-CchhHHHH--HHhHhccCCChhhHHHH
Q psy4974 173 KL-----LGVCKVSLFGWCDGGHLSFVFSMKYPH----MVHKLVIWGTKSFL-TIDNVRVF--EGMRRLSNWSPMARSEV 240 (345)
Q Consensus 173 ~~-----~~~~~i~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~ 240 (345)
+. .+.++|+|+|+|.||.+|+.++....+ .++++++++|.... ........ ........+.......+
T Consensus 61 ~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (211)
T PF07859_consen 61 KNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWF 140 (211)
T ss_dssp HTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHH
T ss_pred cccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccc
Confidence 44 334599999999999999999976433 48999999997644 11111111 01111011111111111
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhc-cCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEEEE
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQE-LLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQYYQ 315 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~~~ 315 (345)
...+... ... .......... .++. -.|+++++|+.|.+++ ....+.+.+ .++++++
T Consensus 141 ~~~~~~~--~~~--------------~~~~~sp~~~~~~~~-~Pp~~i~~g~~D~l~~--~~~~~~~~L~~~gv~v~~~~ 201 (211)
T PF07859_consen 141 WKLYLPG--SDR--------------DDPLASPLNASDLKG-LPPTLIIHGEDDVLVD--DSLRFAEKLKKAGVDVELHV 201 (211)
T ss_dssp HHHHHST--GGT--------------TSTTTSGGGSSCCTT-CHEEEEEEETTSTTHH--HHHHHHHHHHHTT-EEEEEE
T ss_pred ccccccc--ccc--------------ccccccccccccccc-CCCeeeeccccccchH--HHHHHHHHHHHCCCCEEEEE
Confidence 1111100 000 0000000111 1222 2399999999998764 445555544 3578999
Q ss_pred eCCCCCccc
Q psy4974 316 FSSGGHSCH 324 (345)
Q Consensus 316 ~~~~gH~~~ 324 (345)
+++++|.+.
T Consensus 202 ~~g~~H~f~ 210 (211)
T PF07859_consen 202 YPGMPHGFF 210 (211)
T ss_dssp ETTEETTGG
T ss_pred ECCCeEEee
Confidence 999999765
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.1e-11 Score=83.05 Aligned_cols=76 Identities=13% Similarity=0.219 Sum_probs=63.5
Q ss_pred CceEEEEEcCCC---CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 81 GCDIRFIKYGSG---AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 81 g~~l~~~~~g~~---~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
|.+|+++.+.+. +.+|+++||.+.++ ..|..+++.|+++||.|+++|+|| ||.|+.... .
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~-~ry~~~a~~L~~~G~~V~~~D~rG-------------hG~S~g~rg---~ 63 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHS-GRYAHLAEFLAEQGYAVFAYDHRG-------------HGRSEGKRG---H 63 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHH-HHHHHHHHHHHhCCCEEEEECCCc-------------CCCCCCccc---c
Confidence 567888887543 35899999999996 899999999999999999999999 999975433 4
Q ss_pred ccchHHHHHHHHHHHH
Q psy4974 158 FQYIEEDVDIAYELLK 173 (345)
Q Consensus 158 ~~~~~~~~~~~~~~l~ 173 (345)
..+++++++|+..+++
T Consensus 64 ~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 64 IDSFDDYVDDLHQFIQ 79 (79)
T ss_pred cCCHHHHHHHHHHHhC
Confidence 5578888999988763
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >KOG2112|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.6e-10 Score=89.07 Aligned_cols=186 Identities=13% Similarity=0.115 Sum_probs=125.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC--CCCCCCCccchHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP--KGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~--~~~~~~~~~~~~~~~~~~~~~ 171 (345)
.+||++||.+.+. ..|..+++.|.......+++..|-+.+..+.|.-...+.+--. ..... +...+...++.+..+
T Consensus 4 atIi~LHglGDsg-~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~-d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 4 ATIIFLHGLGDSG-SGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPE-DEEGLHRAADNIANL 81 (206)
T ss_pred EEEEEEecCCCCC-ccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccch-hhhHHHHHHHHHHHH
Confidence 4899999999995 9999888888777799999998887777777775433322110 00111 233455556667777
Q ss_pred HHHh---C--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHccc
Q psy4974 172 LKLL---G--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDN 246 (345)
Q Consensus 172 l~~~---~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (345)
+++. + ..+|.+-|+|+||.+|++.+..+|..+.+++...+........ +..
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~------------------------~~~ 137 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG------------------------LPG 137 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh------------------------ccC
Confidence 6654 3 3478999999999999999999987777777665543311000 000
Q ss_pred CCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEEEEeCCCCCc
Q psy4974 247 DVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQYYQFSSGGHS 322 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~~~~~~~gH~ 322 (345)
. ....+ ..|++..||+.|++||....+...+.+ ..++++.+++.+|.
T Consensus 138 ~---------------------------~~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~ 188 (206)
T KOG2112|consen 138 W---------------------------LPGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHS 188 (206)
T ss_pred C---------------------------ccccC--cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccc
Confidence 0 00011 679999999999999987666665554 24788999999998
Q ss_pred ccccChHHHHHH
Q psy4974 323 CHIKHGQVFNEI 334 (345)
Q Consensus 323 ~~~~~~~~~~~~ 334 (345)
...++-+++...
T Consensus 189 ~~~~e~~~~~~~ 200 (206)
T KOG2112|consen 189 TSPQELDDLKSW 200 (206)
T ss_pred ccHHHHHHHHHH
Confidence 875444444333
|
|
| >KOG2551|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.4e-09 Score=87.46 Aligned_cols=186 Identities=17% Similarity=0.186 Sum_probs=113.8
Q ss_pred CceEEEEcCcCCCchhhHHH----HHHhhCCCCeEEEEeCCCCchhhhccCCc---------cC------CCCCCCCCCC
Q psy4974 93 AQVLFFTYGVLGEIRNSFKK----QLTAFDPKLFTSIFWDPPGNVVLYLLGKT---------CS------GYGQSLPKGR 153 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~----~~~~L~~~G~~vi~~D~~G~~~~~~~g~~---------~~------~~G~s~~~~~ 153 (345)
++-|+|+||+--+. ..|.. +...|.+. +..+.+|-|-.-. -.+.+ +. .+|.-.....
T Consensus 5 k~rvLcLHGfrQsg-~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~--~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~ 80 (230)
T KOG2551|consen 5 KLRVLCLHGFRQSG-KVFSEKTGSLRKLLKKL-AELVFPDAPHELP--KADLPDSEREKKFDAPPDVEQNRYGWFSNNEA 80 (230)
T ss_pred CceEEEecchhhcc-HHHHHHhhhHHHHHHhh-heEEecCCCccCC--cccCCcccccccccCCcccccchhhhhccccc
Confidence 46799999999885 66654 33445555 7777777663000 00000 00 0111000000
Q ss_pred CCCCccchHHHHHHHHHHHHHhCCccE-EEEEeChhHHHHHHHHHhC--C------cccceeeEeccCCCCCchhHHHHH
Q psy4974 154 SFVPFQYIEEDVDIAYELLKLLGVCKV-SLFGWCDGGHLSFVFSMKY--P------HMVHKLVIWGTKSFLTIDNVRVFE 224 (345)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~l~~~~~~~i-~lvGhS~Gg~ia~~~a~~~--p------~~v~~lvl~~~~~~~~~~~~~~~~ 224 (345)
.......+++-.+.+.+.+...| |+ .|+|+|.|+.++..++... . ..++-+|++++........
T Consensus 81 ~~~~~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~----- 153 (230)
T KOG2551|consen 81 SFTEYFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKL----- 153 (230)
T ss_pred ccccccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchh-----
Confidence 00012234555677777777766 55 4999999999999888721 1 1357777777754421000
Q ss_pred HhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHH
Q psy4974 225 GMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSL 304 (345)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~ 304 (345)
+-......+++|.|-|.|+.|.++|...+..+
T Consensus 154 ------------------------------------------------~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L 185 (230)
T KOG2551|consen 154 ------------------------------------------------DESAYKRPLSTPSLHIFGETDTIVPSERSEQL 185 (230)
T ss_pred ------------------------------------------------hhhhhccCCCCCeeEEecccceeecchHHHHH
Confidence 00112346899999999999999999999999
Q ss_pred HhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 305 LNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 305 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
++.+++..++.-+ +||.+.-.. ...+.|.+||.
T Consensus 186 ~~~~~~a~vl~Hp-ggH~VP~~~--~~~~~i~~fi~ 218 (230)
T KOG2551|consen 186 AESFKDATVLEHP-GGHIVPNKA--KYKEKIADFIQ 218 (230)
T ss_pred HHhcCCCeEEecC-CCccCCCch--HHHHHHHHHHH
Confidence 9999998655555 899987544 45555555554
|
|
| >KOG2100|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.4e-10 Score=108.98 Aligned_cols=223 Identities=17% Similarity=0.222 Sum_probs=136.6
Q ss_pred eeEEEcCceEEEEEcCC------CC-ceEEEEcCcCCCc------hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCc
Q psy4974 75 GFFSIKGCDIRFIKYGS------GA-QVLFFTYGVLGEI------RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKT 141 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~------~~-p~vv~lHG~~~~~------~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~ 141 (345)
..+..+|...++...-+ .+ |.+|.+||++++- .-.|... .....|+.|+.+|.||
T Consensus 501 ~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RG---------- 568 (755)
T KOG2100|consen 501 GKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRG---------- 568 (755)
T ss_pred EEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCC----------
Confidence 34455888887775432 22 7889999999741 1234333 4567799999999999
Q ss_pred cCCCCCCC--CCCCCCCCccchHHHHHHHHHHHHHh--CCccEEEEEeChhHHHHHHHHHhCCcc-cceeeEeccCCCCC
Q psy4974 142 CSGYGQSL--PKGRSFVPFQYIEEDVDIAYELLKLL--GVCKVSLFGWCDGGHLSFVFSMKYPHM-VHKLVIWGTKSFLT 216 (345)
Q Consensus 142 ~~~~G~s~--~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~ 216 (345)
+.++|..- ...+.. .....++....+..+++.. +.+++.|+|+|.||++++.++...|+. ++..+.++|.....
T Consensus 569 s~~~G~~~~~~~~~~l-G~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 569 SGGYGWDFRSALPRNL-GDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL 647 (755)
T ss_pred cCCcchhHHHHhhhhc-CCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee
Confidence 23333331 111222 2224455555555555544 334899999999999999999998855 45559999987643
Q ss_pred chhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCE-EEEEeCCCCC
Q psy4974 217 IDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPV-LVFHSADDVM 295 (345)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv-l~i~G~~D~~ 295 (345)
........ + .++.. ...... + ........+..++.|. |++||+.|..
T Consensus 648 -~yds~~te-r---------------ymg~p----~~~~~~--------y---~e~~~~~~~~~~~~~~~LliHGt~Ddn 695 (755)
T KOG2100|consen 648 -YYDSTYTE-R---------------YMGLP----SENDKG--------Y---EESSVSSPANNIKTPKLLLIHGTEDDN 695 (755)
T ss_pred -eecccccH-h---------------hcCCC----ccccch--------h---hhccccchhhhhccCCEEEEEcCCcCC
Confidence 11100000 0 00000 000000 0 0111122334445455 9999999999
Q ss_pred CChHHHHHHHhhcC----CcEEEEeCCCCCcccccCh-HHHHHHHHHHHHhh
Q psy4974 296 VSTQQVQSLLNQLK----FCQYYQFSSGGHSCHIKHG-QVFNEISRNFILEE 342 (345)
Q Consensus 296 v~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~-~~~~~~i~~fl~~~ 342 (345)
|+.+.+..+.+.+. ..+..++|+.+|.+..-.. ..+...+..|+...
T Consensus 696 Vh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 696 VHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDC 747 (755)
T ss_pred cCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHH
Confidence 99988888887763 3688999999999876433 66778888888744
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.1e-10 Score=98.84 Aligned_cols=211 Identities=11% Similarity=0.057 Sum_probs=126.1
Q ss_pred CceEEEEcCcCCCchhhH-----HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccc-h-HHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSF-----KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY-I-EEDV 165 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~-~-~~~~ 165 (345)
++|++++|.+... ...| ..++..|.++|..|+.+++++ -..+.. .. ..++ + +...
T Consensus 107 ~~PlLiVpP~iNk-~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~n-------------Pd~~~~---~~-~~edYi~e~l~ 168 (445)
T COG3243 107 KRPLLIVPPWINK-FYILDLSPEKSLVRWLLEQGLDVFVISWRN-------------PDASLA---AK-NLEDYILEGLS 168 (445)
T ss_pred CCceEeeccccCc-eeEEeCCCCccHHHHHHHcCCceEEEeccC-------------chHhhh---hc-cHHHHHHHHHH
Confidence 3689999998665 2444 457888999999999999988 444422 11 1111 1 3334
Q ss_pred HHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcc-cceeeEeccCCCCCchh-------HHHH----HHhHhccCCC
Q psy4974 166 DIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHM-VHKLVIWGTKSFLTIDN-------VRVF----EGMRRLSNWS 233 (345)
Q Consensus 166 ~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~-------~~~~----~~~~~~~~~~ 233 (345)
+.+..+.+..+.++|.++|+|.||.++..+++.++.+ |+.++++.+...+.... .... ..+......+
T Consensus 169 ~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lp 248 (445)
T COG3243 169 EAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILP 248 (445)
T ss_pred HHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCC
Confidence 5555666667889999999999999999998888877 99999988755433211 0001 1111111111
Q ss_pred hhhHHHHHHHcccCC-----------------------------chhhhhHHHHHHHHHHHHHhh---C----chhhhcc
Q psy4974 234 PMARSEVLKAYDNDV-----------------------------NYITGIFNQYVDMVNLIFKSY---G----RNVYQEL 277 (345)
Q Consensus 234 ~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~ 277 (345)
.........++.... .+.......++ +..+... . -....-.
T Consensus 249 g~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~L---rn~y~~N~l~~g~~~v~G~~Vd 325 (445)
T COG3243 249 GWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYL---RNFYLENRLIRGGLEVSGTMVD 325 (445)
T ss_pred hHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHH---HHHHHhChhhccceEECCEEec
Confidence 111111111111111 01111111111 1111110 0 0112334
Q ss_pred CCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC-cEEEEeCCCCCcccc
Q psy4974 278 LPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF-CQYYQFSSGGHSCHI 325 (345)
Q Consensus 278 l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~ 325 (345)
+.+|+||++.+.|++|.++|.+.....+..+++ ++++.. ++||....
T Consensus 326 L~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~-~sGHIa~v 373 (445)
T COG3243 326 LGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLS-RSGHIAGV 373 (445)
T ss_pred hhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEe-cCceEEEE
Confidence 678999999999999999999999999999887 445444 69998655
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.9e-10 Score=95.80 Aligned_cols=175 Identities=16% Similarity=0.182 Sum_probs=89.4
Q ss_pred CceEEEEcCcCCCchhhHHHHH----HhhCCCCeEEEEeCCCCchh--hhcc------------CCccCCCCCCCCCCCC
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQL----TAFDPKLFTSIFWDPPGNVV--LYLL------------GKTCSGYGQSLPKGRS 154 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~----~~L~~~G~~vi~~D~~G~~~--~~~~------------g~~~~~~G~s~~~~~~ 154 (345)
++.|+||||++.++ ..++... ..|.+.++..+.+|-|-... --+. ....+.+-.... ..
T Consensus 4 k~riLcLHG~~~na-~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~--~~ 80 (212)
T PF03959_consen 4 KPRILCLHGYGQNA-EIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDD--DD 80 (212)
T ss_dssp --EEEEE--TT--H-HHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S---S
T ss_pred CceEEEeCCCCcCH-HHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCC--Cc
Confidence 46899999999995 7776654 44544259999988665110 0000 000000111100 01
Q ss_pred CCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC--------CcccceeeEeccCCCCCchhHHHHHHh
Q psy4974 155 FVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY--------PHMVHKLVIWGTKSFLTIDNVRVFEGM 226 (345)
Q Consensus 155 ~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~~~~~~~~~~~~~~ 226 (345)
. ....+++..+.+.++++..+. =..|+|+|.||.+|..++... ...++-+|++++.......
T Consensus 81 ~-~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~-------- 150 (212)
T PF03959_consen 81 H-EYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD-------- 150 (212)
T ss_dssp G-GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE---------
T ss_pred c-cccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh--------
Confidence 1 233566667777787777662 346999999999998888542 1247888888876542211
Q ss_pred HhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHh
Q psy4974 227 RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLN 306 (345)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~ 306 (345)
+... . ....|++|+|.|+|.+|.+++++.++.+.+
T Consensus 151 -----------------~~~~---------------------------~-~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~ 185 (212)
T PF03959_consen 151 -----------------YQEL---------------------------Y-DEPKISIPTLHVIGENDPVVPPERSEALAE 185 (212)
T ss_dssp -----------------GTTT---------------------------T---TT---EEEEEEETT-SSS-HHHHHHHHH
T ss_pred -----------------hhhh---------------------------h-ccccCCCCeEEEEeCCCCCcchHHHHHHHH
Confidence 0000 0 234579999999999999999999999999
Q ss_pred hcCC-cEEEEeCCCCCccccc
Q psy4974 307 QLKF-CQYYQFSSGGHSCHIK 326 (345)
Q Consensus 307 ~~~~-~~~~~~~~~gH~~~~~ 326 (345)
.+.+ .+++..+ +||.+...
T Consensus 186 ~~~~~~~v~~h~-gGH~vP~~ 205 (212)
T PF03959_consen 186 MFDPDARVIEHD-GGHHVPRK 205 (212)
T ss_dssp HHHHHEEEEEES-SSSS----
T ss_pred hccCCcEEEEEC-CCCcCcCC
Confidence 8876 6776675 89988754
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.8e-09 Score=87.44 Aligned_cols=113 Identities=11% Similarity=0.148 Sum_probs=68.9
Q ss_pred CceEEEEcCcCCCchhhHHHH--HHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQ--LTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~--~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
.|.||++||.+.+. ..+... ...|++ +||-|+.++...+.+. + .|..+....... ..........-+.
T Consensus 16 ~PLVv~LHG~~~~a-~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~---~-~cw~w~~~~~~~----g~~d~~~i~~lv~ 86 (220)
T PF10503_consen 16 VPLVVVLHGCGQSA-EDFAAGSGWNALADREGFIVVYPEQSRRANP---Q-GCWNWFSDDQQR----GGGDVAFIAALVD 86 (220)
T ss_pred CCEEEEeCCCCCCH-HHHHhhcCHHHHhhcCCeEEEcccccccCCC---C-Cccccccccccc----CccchhhHHHHHH
Confidence 47999999999985 555432 234554 4899999986431100 0 111110000000 1111111222233
Q ss_pred HHHHHhCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 170 ELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 170 ~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.+..+.+++ +|++.|+|.||.++..++..+|+.+.++...++...
T Consensus 87 ~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 87 YVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred hHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 444454544 899999999999999999999999999988887655
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.4e-08 Score=80.37 Aligned_cols=118 Identities=15% Similarity=0.077 Sum_probs=74.8
Q ss_pred ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHH
Q psy4974 178 CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQ 257 (345)
Q Consensus 178 ~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (345)
+++.|||+|+||+.|..+|.++. + ..|+++|+..+.... ....+...+ .......
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~P~~~L---------------------~~~ig~~~~-y~~~~~~ 114 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLFPEENM---------------------EGKIDRPEE-YADIATK 114 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCChHHHH---------------------HHHhCCCcc-hhhhhHH
Confidence 57999999999999999999985 3 678889987642111 111111111 1112222
Q ss_pred HHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCc-EEEEeCCCCCcccccChHHHHHHHH
Q psy4974 258 YVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFC-QYYQFSSGGHSCHIKHGQVFNEISR 336 (345)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~ 336 (345)
.++.+. ..-+-..+++..+.|++.+...+..... ++ +..+.+|++|-+ ++-++....|.
T Consensus 115 h~~eL~---------------~~~p~r~~vllq~gDEvLDyr~a~~~y~---~~y~~~v~~GGdH~f--~~fe~~l~~I~ 174 (180)
T PRK04940 115 CVTNFR---------------EKNRDRCLVILSRNDEVLDSQRTAEELH---PYYEIVWDEEQTHKF--KNISPHLQRIK 174 (180)
T ss_pred HHHHhh---------------hcCcccEEEEEeCCCcccCHHHHHHHhc---cCceEEEECCCCCCC--CCHHHHHHHHH
Confidence 222222 1123346899999999998766655443 44 688888888865 34566788888
Q ss_pred HHHH
Q psy4974 337 NFIL 340 (345)
Q Consensus 337 ~fl~ 340 (345)
+|+.
T Consensus 175 ~F~~ 178 (180)
T PRK04940 175 AFKT 178 (180)
T ss_pred HHHh
Confidence 8884
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.5e-10 Score=88.53 Aligned_cols=181 Identities=15% Similarity=0.061 Sum_probs=111.9
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKL 174 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~ 174 (345)
.+||+.|=+|-. ..=..+++.|+++|+.|+.+|-+- |-.+.+.+. +...+..+.+..+.++
T Consensus 4 ~~v~~SGDgGw~-~~d~~~a~~l~~~G~~VvGvdsl~-------------Yfw~~rtP~-----~~a~Dl~~~i~~y~~~ 64 (192)
T PF06057_consen 4 LAVFFSGDGGWR-DLDKQIAEALAKQGVPVVGVDSLR-------------YFWSERTPE-----QTAADLARIIRHYRAR 64 (192)
T ss_pred EEEEEeCCCCch-hhhHHHHHHHHHCCCeEEEechHH-------------HHhhhCCHH-----HHHHHHHHHHHHHHHH
Confidence 578888876663 455668899999999999999777 555533221 1222333333344555
Q ss_pred hCCccEEEEEeChhHHHHHHHHHhCC----cccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCch
Q psy4974 175 LGVCKVSLFGWCDGGHLSFVFSMKYP----HMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNY 250 (345)
Q Consensus 175 ~~~~~i~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
.+.++++|+|+|+|+-+......+.| ++|+.++|+++.....-.. ....++...
T Consensus 65 w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFei-------------------hv~~wlg~~--- 122 (192)
T PF06057_consen 65 WGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEI-------------------HVSGWLGMG--- 122 (192)
T ss_pred hCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEE-------------------EhhhhcCCC---
Confidence 67789999999999988887777776 4799999999865422100 000111111
Q ss_pred hhhhHHHHHHHHHHHHHhhCchhhhccCCCCC-CCEEEEEeCCCCC--CChHHHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 251 ITGIFNQYVDMVNLIFKSYGRNVYQELLPYVD-VPVLVFHSADDVM--VSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~Pvl~i~G~~D~~--v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
......+....+.+++ .|++.|+|+++.- +| .+. .++.+.+.+| +||.+- ++
T Consensus 123 ----------------~~~~~~~~~pei~~l~~~~v~CiyG~~E~d~~cp-----~l~--~~~~~~i~lp-GgHHfd-~d 177 (192)
T PF06057_consen 123 ----------------GDDAAYPVIPEIAKLPPAPVQCIYGEDEDDSLCP-----SLR--QPGVEVIALP-GGHHFD-GD 177 (192)
T ss_pred ----------------CCcccCCchHHHHhCCCCeEEEEEcCCCCCCcCc-----ccc--CCCcEEEEcC-CCcCCC-CC
Confidence 0000011222333443 5999999987753 33 111 2578999998 566554 45
Q ss_pred hHHHHHHHHHHHHh
Q psy4974 328 GQVFNEISRNFILE 341 (345)
Q Consensus 328 ~~~~~~~i~~fl~~ 341 (345)
-+++++.|.+-|+.
T Consensus 178 y~~La~~Il~~l~~ 191 (192)
T PF06057_consen 178 YDALAKRILDALKA 191 (192)
T ss_pred HHHHHHHHHHHHhc
Confidence 67777877776653
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >KOG3975|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=2e-08 Score=81.84 Aligned_cols=245 Identities=11% Similarity=0.061 Sum_probs=142.6
Q ss_pred eeeEEEcCceEEEEEc-------CCCCceEEEEcCcCCCchhhHHHHHHhhCCC-C--eEEEEeCCCCchhhhccCCccC
Q psy4974 74 EGFFSIKGCDIRFIKY-------GSGAQVLFFTYGVLGEIRNSFKKQLTAFDPK-L--FTSIFWDPPGNVVLYLLGKTCS 143 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~-------g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~-G--~~vi~~D~~G~~~~~~~g~~~~ 143 (345)
+.++..+|.++..... +..++.++++.|.+|.. ..|.+++..|..+ + +.++.+-..|
T Consensus 3 e~~~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~-gFY~~F~~~L~~~l~~r~~~wtIsh~~------------ 69 (301)
T KOG3975|consen 3 EKEYTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLL-GFYTEFARHLHLNLIDRLPVWTISHAG------------ 69 (301)
T ss_pred ceeeeecCCcccceeeeeeeccCCCCceEEEEecCCCCch-hHHHHHHHHHHHhcccccceeEEeccc------------
Confidence 4455555555444332 34557899999999995 8888888776443 1 5688887777
Q ss_pred CCCCCC---CC---CCCCCCccchHHHHHHHHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhCC--cccceeeEeccCC
Q psy4974 144 GYGQSL---PK---GRSFVPFQYIEEDVDIAYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYP--HMVHKLVIWGTKS 213 (345)
Q Consensus 144 ~~G~s~---~~---~~~~~~~~~~~~~~~~~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~ 213 (345)
|-.-+ .. .... +.-+++++++.-.++++..-. .+++++|||.|+++.+.+..... -.|.+++++-|..
T Consensus 70 -H~~~P~sl~~~~s~~~~-eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 70 -HALMPASLREDHSHTNE-EIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred -cccCCcccccccccccc-cccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 64332 11 1111 233677888888888887643 38999999999999999886432 3577888777643
Q ss_pred CCCchhH------HHHHHhH------h--ccC-CChhhHHHHHHHcccCCchhhhhHHHH----------------HHHH
Q psy4974 214 FLTIDNV------RVFEGMR------R--LSN-WSPMARSEVLKAYDNDVNYITGIFNQY----------------VDMV 262 (345)
Q Consensus 214 ~~~~~~~------~~~~~~~------~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~ 262 (345)
......+ .....+. . ... .+...+..+.+.+.............. -+++
T Consensus 148 erM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm 227 (301)
T KOG3975|consen 148 ERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEM 227 (301)
T ss_pred HHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHH
Confidence 2111000 0000000 0 001 111222222222211110111111000 0011
Q ss_pred HHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCc--EEEEeCCCCCcccccChHHHHHHHHHHH
Q psy4974 263 NLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFC--QYYQFSSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~--~~~~~~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
..... ...+.+.+-.+-+.+.+|..|.+||.+....+.+.+|.. ++-+ ++..|.+...+.+..+..+.+.+
T Consensus 228 ~eV~~-----~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 228 EEVTT-----RDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred HHHHH-----hHHHHHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 11111 012223344567899999999999999999999999864 4444 67999999999999888888765
|
|
| >KOG1515|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.8e-09 Score=94.79 Aligned_cols=216 Identities=15% Similarity=0.027 Sum_probs=122.9
Q ss_pred CceEEEEcCcCCC----chhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLGE----IRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~~----~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
.|.||++||+|.. ....|..+...++. .+..|+++|+|- - |+..+ + ..+++-.+.
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL-------------A-----PEh~~-P-a~y~D~~~A 149 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL-------------A-----PEHPF-P-AAYDDGWAA 149 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc-------------C-----CCCCC-C-ccchHHHHH
Confidence 4799999998753 13567777777744 479999999988 2 22222 2 234555555
Q ss_pred HHHHHHH------hCCccEEEEEeChhHHHHHHHHHhC------CcccceeeEeccCCCCCchhHHHHHHhHhcc-CCCh
Q psy4974 168 AYELLKL------LGVCKVSLFGWCDGGHLSFVFSMKY------PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS-NWSP 234 (345)
Q Consensus 168 ~~~~l~~------~~~~~i~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~ 234 (345)
+..+.++ .+.++++|+|-|.||.+|..+|.+. +.++++.|++-|............+...... ....
T Consensus 150 l~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~ 229 (336)
T KOG1515|consen 150 LKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELAR 229 (336)
T ss_pred HHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchhH
Confidence 5555553 2445899999999999999988763 3579999999997764433322222111111 0000
Q ss_pred hhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhh----hccCCCCCC-CEEEEEeCCCCCCCh--HHHHHHHhh
Q psy4974 235 MARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVY----QELLPYVDV-PVLVFHSADDVMVST--QQVQSLLNQ 307 (345)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~i~~-Pvl~i~G~~D~~v~~--~~~~~~~~~ 307 (345)
.......+.+-++. .. ......-.+. .....-..+ |++++.++.|.+... ..++++.+.
T Consensus 230 ~~~~~~w~~~lP~~--~~------------~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~ 295 (336)
T KOG1515|consen 230 PKIDKWWRLLLPNG--KT------------DLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKA 295 (336)
T ss_pred HHHHHHHHHhCCCC--CC------------CcCCccccccccccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHc
Confidence 01111111111110 00 0000000000 111222334 599999999987652 233444333
Q ss_pred cCCcEEEEeCCCCCcccccCh-----HHHHHHHHHHHHhh
Q psy4974 308 LKFCQYYQFSSGGHSCHIKHG-----QVFNEISRNFILEE 342 (345)
Q Consensus 308 ~~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~~ 342 (345)
--.+++..++++.|.++.-.+ .++.+.+.+|+.+.
T Consensus 296 Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 296 GVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 234567789999998776443 46778888888764
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.6e-09 Score=91.26 Aligned_cols=104 Identities=16% Similarity=0.147 Sum_probs=68.2
Q ss_pred ceEEEEcCcCCCchhhHHHH---H------HhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQ---L------TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEED 164 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~---~------~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~ 164 (345)
|+||..|+.+.......... . ..|.++||.|+..|.|| .|.|....... ....
T Consensus 21 P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG-------------~g~S~G~~~~~-----~~~e 82 (272)
T PF02129_consen 21 PVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRG-------------TGGSEGEFDPM-----SPNE 82 (272)
T ss_dssp EEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TT-------------STTS-S-B-TT-----SHHH
T ss_pred cEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcc-------------cccCCCccccC-----ChhH
Confidence 78999999986521222211 1 12888999999999999 99996554331 2333
Q ss_pred HHHHH---HHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 165 VDIAY---ELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 165 ~~~~~---~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
++|.. +++..... .+|.++|.|++|..++.+|...|..+++++...+....
T Consensus 83 ~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 83 AQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred HHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 44444 44444333 28999999999999999999888889999998775543
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.7e-10 Score=101.12 Aligned_cols=170 Identities=14% Similarity=0.125 Sum_probs=83.3
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCC-chhhhc--cCCccCCCC--CCCCCC------CCCCCcc---
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPG-NVVLYL--LGKTCSGYG--QSLPKG------RSFVPFQ--- 159 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G-~~~~~~--~g~~~~~~G--~s~~~~------~~~~~~~--- 159 (345)
|+|||-||++++ +..|..++..|+.+||-|+++|.|. |..+.+ ......... ...... .......
T Consensus 101 PvvIFSHGlgg~-R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T PF03403_consen 101 PVVIFSHGLGGS-RTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFE 179 (379)
T ss_dssp EEEEEE--TT---TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHH
T ss_pred CEEEEeCCCCcc-hhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHH
Confidence 899999999999 6999999999999999999999995 211111 111100000 000000 0000000
Q ss_pred ----chHHHHHHHHHHHHHh--------------------------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEe
Q psy4974 160 ----YIEEDVDIAYELLKLL--------------------------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIW 209 (345)
Q Consensus 160 ----~~~~~~~~~~~~l~~~--------------------------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 209 (345)
.++..+.++..+++.+ +.+++.++|||+||..++..+.+. .++++.|++
T Consensus 180 ~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~L 258 (379)
T PF03403_consen 180 LRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILL 258 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEe
Confidence 0111122333232221 134799999999999999988776 579999999
Q ss_pred ccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEE
Q psy4974 210 GTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFH 289 (345)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~ 289 (345)
++...+-. .+....++.|+|+|.
T Consensus 259 D~W~~Pl~---------------------------------------------------------~~~~~~i~~P~L~In 281 (379)
T PF03403_consen 259 DPWMFPLG---------------------------------------------------------DEIYSKIPQPLLFIN 281 (379)
T ss_dssp S---TTS----------------------------------------------------------GGGGGG--S-EEEEE
T ss_pred CCcccCCC---------------------------------------------------------cccccCCCCCEEEEE
Confidence 99754210 001134678999998
Q ss_pred eCCCCCCChHHHHHHHhh---cCCcEEEEeCCCCCccc
Q psy4974 290 SADDVMVSTQQVQSLLNQ---LKFCQYYQFSSGGHSCH 324 (345)
Q Consensus 290 G~~D~~v~~~~~~~~~~~---~~~~~~~~~~~~gH~~~ 324 (345)
++. +........+.+. -++..++.+.|+.|..+
T Consensus 282 Se~--f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~ 317 (379)
T PF03403_consen 282 SES--FQWWENIFRMKKVISNNKESRMLTIKGTAHLSF 317 (379)
T ss_dssp ETT--T--HHHHHHHHTT--TTS-EEEEEETT--GGGG
T ss_pred Ccc--cCChhhHHHHHHHhccCCCcEEEEECCCcCCCc
Confidence 774 2333333333332 24568889999999743
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1e-08 Score=91.03 Aligned_cols=212 Identities=14% Similarity=0.031 Sum_probs=112.7
Q ss_pred CceEEEEcCcCCC--chhhH-HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGE--IRNSF-KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 93 ~p~vv~lHG~~~~--~~~~~-~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
.|+||++||++.. +.... ..+...+...|+.|+.+|+|- - |...| +. .+++..+.+.
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrl-------------a-----Pe~~~-p~-~~~d~~~a~~ 138 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRL-------------A-----PEHPF-PA-ALEDAYAAYR 138 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCC-------------C-----CCCCC-Cc-hHHHHHHHHH
Confidence 4799999998743 12334 444555666799999999998 2 22222 11 2333333333
Q ss_pred HHHHH---hC--CccEEEEEeChhHHHHHHHHHhCCc----ccceeeEeccCCCCCchhHHHHHHhHhccCCChhh-HHH
Q psy4974 170 ELLKL---LG--VCKVSLFGWCDGGHLSFVFSMKYPH----MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMA-RSE 239 (345)
Q Consensus 170 ~~l~~---~~--~~~i~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 239 (345)
.+.++ ++ .++|.++|+|.||.+++.++....+ ...+.+++.|...... ....+........+.... ...
T Consensus 139 ~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~~~~~~~~~~~~~~~~ 217 (312)
T COG0657 139 WLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPGYGEADLLDAAAILAW 217 (312)
T ss_pred HHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhhcCCccccCHHHHHHH
Confidence 33333 34 4589999999999999998876543 4788899998766543 111111111000011110 101
Q ss_pred HHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCC--hHHHHHHHhhcCCcEEEEeC
Q psy4974 240 VLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVS--TQQVQSLLNQLKFCQYYQFS 317 (345)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~--~~~~~~~~~~~~~~~~~~~~ 317 (345)
+...+......... ...... ....+.. -.|+++++|+.|.+.+ ...++++.+.-..+++..++
T Consensus 218 ~~~~~~~~~~~~~~-------------p~~spl-~~~~~~~-lPP~~i~~a~~D~l~~~~~~~a~~L~~agv~~~~~~~~ 282 (312)
T COG0657 218 FADLYLGAAPDRED-------------PEASPL-ASDDLSG-LPPTLIQTAEFDPLRDEGEAYAERLRAAGVPVELRVYP 282 (312)
T ss_pred HHHHhCcCccccCC-------------CccCcc-ccccccC-CCCEEEEecCCCcchhHHHHHHHHHHHcCCeEEEEEeC
Confidence 11111111000000 000000 0111233 3589999999999988 22334444443456889999
Q ss_pred CCCCcccccChH---HHHHHHHHHHH
Q psy4974 318 SGGHSCHIKHGQ---VFNEISRNFIL 340 (345)
Q Consensus 318 ~~gH~~~~~~~~---~~~~~i~~fl~ 340 (345)
++.|.+...... .....+.+|+.
T Consensus 283 g~~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 283 GMIHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred CcceeccccCcHHHHHHHHHHHHHHH
Confidence 999966443322 22345555555
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.8e-10 Score=90.31 Aligned_cols=104 Identities=14% Similarity=0.110 Sum_probs=74.7
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|.|+|+||+.-.. ..|..++.+++.+||-|+++++-. - .. +...- .++...+.++++..-+.
T Consensus 47 PVilF~HG~~l~n-s~Ys~lL~HIASHGfIVVAPQl~~-------------~--~~-p~~~~-Ei~~aa~V~~WL~~gL~ 108 (307)
T PF07224_consen 47 PVILFLHGFNLYN-SFYSQLLAHIASHGFIVVAPQLYT-------------L--FP-PDGQD-EIKSAASVINWLPEGLQ 108 (307)
T ss_pred cEEEEeechhhhh-HHHHHHHHHHhhcCeEEEechhhc-------------c--cC-CCchH-HHHHHHHHHHHHHhhhh
Confidence 7999999998884 899999999999999999999855 2 21 22111 22233333344433333
Q ss_pred Hh-------CCccEEEEEeChhHHHHHHHHHhCC--cccceeeEeccCCCC
Q psy4974 174 LL-------GVCKVSLFGWCDGGHLSFVFSMKYP--HMVHKLVIWGTKSFL 215 (345)
Q Consensus 174 ~~-------~~~~i~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~ 215 (345)
.+ +..++.++|||.||-.|..+|..+. -.+.++|.++|....
T Consensus 109 ~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 109 HVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred hhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 32 2458999999999999999998763 248899999997664
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG2281|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.3e-09 Score=99.56 Aligned_cols=209 Identities=19% Similarity=0.221 Sum_probs=128.1
Q ss_pred CceEEEEcCcCCC--chhhHH--HH--HHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC--CCCCCCCCccchHHH
Q psy4974 93 AQVLFFTYGVLGE--IRNSFK--KQ--LTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL--PKGRSFVPFQYIEED 164 (345)
Q Consensus 93 ~p~vv~lHG~~~~--~~~~~~--~~--~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~--~~~~~~~~~~~~~~~ 164 (345)
-|+++++-|+++- ....|. .. ...|+..||.|+.+|-||+-+ .|.-- .-.... ..-.+++.
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~h----------RGlkFE~~ik~km-GqVE~eDQ 710 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAH----------RGLKFESHIKKKM-GQVEVEDQ 710 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccc----------cchhhHHHHhhcc-Ceeeehhh
Confidence 3899999999874 112232 22 356888999999999999211 01100 000011 22246777
Q ss_pred HHHHHHHHHHhC---CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHH
Q psy4974 165 VDIAYELLKLLG---VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVL 241 (345)
Q Consensus 165 ~~~~~~~l~~~~---~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
++.+.-+.++.| .++|.+-|||.||+++++...++|+-++..|.-+|......... ... .
T Consensus 711 Veglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDT--------------gYT---E 773 (867)
T KOG2281|consen 711 VEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDT--------------GYT---E 773 (867)
T ss_pred HHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecc--------------cch---h
Confidence 888888888775 46999999999999999999999987777776666543211000 000 0
Q ss_pred HHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEEEEeC
Q psy4974 242 KAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQYYQFS 317 (345)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~~~~~ 317 (345)
+.++.. ... ..-+....-....+.++.-+-..|++||--|.-|.......+.+.+ +..++.+||
T Consensus 774 RYMg~P----~~n--------E~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP 841 (867)
T KOG2281|consen 774 RYMGYP----DNN--------EHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFP 841 (867)
T ss_pred hhcCCC----ccc--------hhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEcc
Confidence 000000 000 0000000000113334444556899999999999877766666554 456999999
Q ss_pred CCCCcccc-cChHHHHHHHHHHHHh
Q psy4974 318 SGGHSCHI-KHGQVFNEISRNFILE 341 (345)
Q Consensus 318 ~~gH~~~~-~~~~~~~~~i~~fl~~ 341 (345)
+--|.+-. |...-....+..||++
T Consensus 842 ~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 842 NERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred ccccccCCCccchhHHHHHHHHHhh
Confidence 99998765 4456677788888875
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=4e-09 Score=88.09 Aligned_cols=153 Identities=19% Similarity=0.281 Sum_probs=97.8
Q ss_pred cCceEEEEEcCC-----CC---ceEEEEcCcCCCchhhHHHHHH-------hhCCCCeEEEEeCC-CCchhhhccCCccC
Q psy4974 80 KGCDIRFIKYGS-----GA---QVLFFTYGVLGEIRNSFKKQLT-------AFDPKLFTSIFWDP-PGNVVLYLLGKTCS 143 (345)
Q Consensus 80 ~g~~l~~~~~g~-----~~---p~vv~lHG~~~~~~~~~~~~~~-------~L~~~G~~vi~~D~-~G~~~~~~~g~~~~ 143 (345)
.|.++.|+.+-+ ++ |.+||+||.+..+......+.. ...+.++-|+++.+ +=
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~i------------ 237 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPI------------ 237 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccc------------
Confidence 567788876532 22 7899999998765344433322 22233456666663 22
Q ss_pred CCCCCCCCCCCCCCccchHHHHHHHH-HHHHHhCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH
Q psy4974 144 GYGQSLPKGRSFVPFQYIEEDVDIAY-ELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV 220 (345)
Q Consensus 144 ~~G~s~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 220 (345)
+..++.. +........+.+. .+.++.+++ +|+++|.|+||+-++.++.++|+.+.+.+++++......
T Consensus 238 -f~d~e~~-----t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~--- 308 (387)
T COG4099 238 -FADSEEK-----TLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVY--- 308 (387)
T ss_pred -ccccccc-----cchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhh---
Confidence 2233221 1112333344444 344555555 899999999999999999999999999999988654100
Q ss_pred HHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHH
Q psy4974 221 RVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ 300 (345)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~ 300 (345)
....+ -+.|+.++|+.+|+++|.+.
T Consensus 309 -----------------------------------------------------lv~~l--k~~piWvfhs~dDkv~Pv~n 333 (387)
T COG4099 309 -----------------------------------------------------LVRTL--KKAPIWVFHSSDDKVIPVSN 333 (387)
T ss_pred -----------------------------------------------------hhhhh--ccCceEEEEecCCCccccCc
Confidence 01111 25799999999999999877
Q ss_pred HHHHHhhc
Q psy4974 301 VQSLLNQL 308 (345)
Q Consensus 301 ~~~~~~~~ 308 (345)
++-+.+.+
T Consensus 334 Srv~y~~l 341 (387)
T COG4099 334 SRVLYERL 341 (387)
T ss_pred ceeehHHH
Confidence 66655554
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=9e-08 Score=88.82 Aligned_cols=125 Identities=19% Similarity=0.252 Sum_probs=80.9
Q ss_pred eeeeEEEc----CceEEEEEcC-----CCCceEEEEcCcCCCchhhHHHHHH------------------hhCCCCeEEE
Q psy4974 73 TEGFFSIK----GCDIRFIKYG-----SGAQVLFFTYGVLGEIRNSFKKQLT------------------AFDPKLFTSI 125 (345)
Q Consensus 73 ~~~~~~~~----g~~l~~~~~g-----~~~p~vv~lHG~~~~~~~~~~~~~~------------------~L~~~G~~vi 125 (345)
...++.++ +..++|.-.. ...|.||+++|++|++ ..+-.+.+ .+.+. ..++
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~s-s~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l 125 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCS-SMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVI 125 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHH-HHHhhhccCCCeEEeCCCCceeECCcccccc-cCeE
Confidence 36778874 3566665432 2348999999999985 44422210 12223 6789
Q ss_pred EeCCC-CchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh-------CCccEEEEEeChhHHHHHHHHH
Q psy4974 126 FWDPP-GNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLL-------GVCKVSLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 126 ~~D~~-G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~i~lvGhS~Gg~ia~~~a~ 197 (345)
.+|.| | +|.|......+ ..+.++.++++.++++.+ ...+++|+|||+||.++..+|.
T Consensus 126 ~iDqP~G-------------~G~S~~~~~~~--~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~ 190 (462)
T PTZ00472 126 YVDQPAG-------------VGFSYADKADY--DHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAY 190 (462)
T ss_pred EEeCCCC-------------cCcccCCCCCC--CCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHH
Confidence 99975 7 77775433322 123456677777776643 3469999999999999888876
Q ss_pred hC----------CcccceeeEeccCCC
Q psy4974 198 KY----------PHMVHKLVIWGTKSF 214 (345)
Q Consensus 198 ~~----------p~~v~~lvl~~~~~~ 214 (345)
+. .-.++++++-++...
T Consensus 191 ~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 191 RINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred HHHhhccccCCceeeeEEEEEeccccC
Confidence 52 124788888887543
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.4e-09 Score=88.10 Aligned_cols=104 Identities=18% Similarity=0.131 Sum_probs=69.0
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhC--------CCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccc-hHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFD--------PKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY-IEED 164 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~--------~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~-~~~~ 164 (345)
.+|||+||.+|+ ...|+.+...+. ...++++++|+.. ....- ... .+.. .+..
T Consensus 5 ~pVlFIhG~~Gs-~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~-------------~~s~~-~g~---~l~~q~~~~ 66 (225)
T PF07819_consen 5 IPVLFIHGNAGS-YKQVRSLASELQRKALLNDNSSHFDFFTVDFNE-------------ELSAF-HGR---TLQRQAEFL 66 (225)
T ss_pred CEEEEECcCCCC-HhHHHHHHHHHhhhhhhccCccceeEEEeccCc-------------ccccc-ccc---cHHHHHHHH
Confidence 599999999999 488877765552 1248899999877 32110 111 1111 1222
Q ss_pred HHHHHHHHHHh-----CCccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCCC
Q psy4974 165 VDIAYELLKLL-----GVCKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSFL 215 (345)
Q Consensus 165 ~~~~~~~l~~~-----~~~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~ 215 (345)
.+.+..+++.+ +.++++||||||||.+|..++...+ +.|+.+|.++++...
T Consensus 67 ~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 67 AEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred HHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 33444555555 4569999999999999988876543 479999999987653
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.9e-10 Score=97.96 Aligned_cols=205 Identities=15% Similarity=0.060 Sum_probs=111.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC---CCCccchHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS---FVPFQYIEEDVDIAYE 170 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~---~~~~~~~~~~~~~~~~ 170 (345)
|.|++-||.++. ...|..+++.|++.||.|.++|.|| +..|........ | ....+.+...++..
T Consensus 72 PlvvlshG~Gs~-~~~f~~~A~~lAs~Gf~Va~~~hpg-----------s~~~~~~~~~~~~~~~-~p~~~~erp~dis~ 138 (365)
T COG4188 72 PLVVLSHGSGSY-VTGFAWLAEHLASYGFVVAAPDHPG-----------SNAGGAPAAYAGPGSY-APAEWWERPLDISA 138 (365)
T ss_pred CeEEecCCCCCC-ccchhhhHHHHhhCceEEEeccCCC-----------cccccCChhhcCCccc-chhhhhcccccHHH
Confidence 789999999999 5999999999999999999999999 223333211110 1 11111122222222
Q ss_pred HHH-------------HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeE--------eccCCCCCchhHHHHHHhHhc
Q psy4974 171 LLK-------------LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVI--------WGTKSFLTIDNVRVFEGMRRL 229 (345)
Q Consensus 171 ~l~-------------~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl--------~~~~~~~~~~~~~~~~~~~~~ 229 (345)
+++ ++...+|.++|||+||+.++.++....+-.....- ..+..... +... ...
T Consensus 139 lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~----~~l~--q~~ 212 (365)
T COG4188 139 LLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNG----RLLN--QCA 212 (365)
T ss_pred HHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcCh----hhhc--ccc
Confidence 222 22345899999999999999988765431111111 11111000 0000 000
Q ss_pred cCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH-HHHHHHhhc
Q psy4974 230 SNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ-QVQSLLNQL 308 (345)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~-~~~~~~~~~ 308 (345)
..+.. .....+... . .......-.......-...+.+++.|++++.|..|.+.|.. ........+
T Consensus 213 av~~~----~~~~~~rDp------r----iravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l 278 (365)
T COG4188 213 AVWLP----RQAYDLRDP------R----IRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYL 278 (365)
T ss_pred ccccc----hhhhccccc------c----ceeeeeccCCcccccccccceeeecceeeecccccccCCcccccccccccC
Confidence 00000 000000000 0 00000000000011114456788999999999999977743 455556667
Q ss_pred CCc--EEEEeCCCCCcccccChHHH
Q psy4974 309 KFC--QYYQFSSGGHSCHIKHGQVF 331 (345)
Q Consensus 309 ~~~--~~~~~~~~gH~~~~~~~~~~ 331 (345)
++. -+..++++.|+.+++-.++.
T Consensus 279 ~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 279 PGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred CcchhheeecCCCccccccccCccc
Confidence 765 67788999999998766553
|
|
| >KOG4627|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.2e-09 Score=82.80 Aligned_cols=183 Identities=15% Similarity=0.054 Sum_probs=110.3
Q ss_pred CCceEEEEcCcCCC--chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGE--IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 92 ~~p~vv~lHG~~~~--~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
..|..||+||+-.. .+......+..+.++||+|..++ ++.+..... -..++.+...-+.
T Consensus 66 ~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvg----------------Y~l~~q~ht---L~qt~~~~~~gv~ 126 (270)
T KOG4627|consen 66 QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVG----------------YNLCPQVHT---LEQTMTQFTHGVN 126 (270)
T ss_pred CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEec----------------cCcCccccc---HHHHHHHHHHHHH
Confidence 34699999996432 12333345556667789999986 455532210 1113334444444
Q ss_pred HHHHHhC-CccEEEEEeChhHHHHHHHHHh-CCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccC
Q psy4974 170 ELLKLLG-VCKVSLFGWCDGGHLSFVFSMK-YPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDND 247 (345)
Q Consensus 170 ~~l~~~~-~~~i~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
-+++... .+.+.+-|||.|+.+|+.+..+ +..+|.+++++++........ ... +..+
T Consensus 127 filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~--------~te-------------~g~d 185 (270)
T KOG4627|consen 127 FILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELS--------NTE-------------SGND 185 (270)
T ss_pred HHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHh--------CCc-------------cccc
Confidence 4455543 3467788999999999987765 345799999988865521100 000 0000
Q ss_pred CchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 248 VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
+. ...+..+. ...+ ...+..++.|+|++.|.+|.---.+..+.++..+..+++..+++.+|+-.+++
T Consensus 186 ---lg-Lt~~~ae~--------~Scd-l~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 186 ---LG-LTERNAES--------VSCD-LWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred ---cC-cccchhhh--------cCcc-HHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHH
Confidence 00 00000000 0000 23355678999999999997555678888888888899999999999977654
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.95 E-value=7e-08 Score=80.08 Aligned_cols=201 Identities=12% Similarity=0.114 Sum_probs=112.9
Q ss_pred EEcCcC--CCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH-H
Q psy4974 98 FTYGVL--GEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK-L 174 (345)
Q Consensus 98 ~lHG~~--~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~-~ 174 (345)
++|+.+ ++ ...|..+...|... +.|+++|.+| ++.+..... +++..++.+...+. .
T Consensus 2 ~~~~~~~~~~-~~~~~~~~~~l~~~-~~v~~~~~~g-------------~~~~~~~~~------~~~~~~~~~~~~l~~~ 60 (212)
T smart00824 2 CFPSTAAPSG-PHEYARLAAALRGR-RDVSALPLPG-------------FGPGEPLPA------SADALVEAQAEAVLRA 60 (212)
T ss_pred ccCCCCCCCc-HHHHHHHHHhcCCC-ccEEEecCCC-------------CCCCCCCCC------CHHHHHHHHHHHHHHh
Confidence 456544 55 38899999999876 9999999999 876543321 45555655554433 3
Q ss_pred hCCccEEEEEeChhHHHHHHHHHhC---CcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchh
Q psy4974 175 LGVCKVSLFGWCDGGHLSFVFSMKY---PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYI 251 (345)
Q Consensus 175 ~~~~~i~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (345)
....+++++|||+||.++..++.+. ++.+.+++++++............ ......+.......
T Consensus 61 ~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~---- 126 (212)
T smart00824 61 AGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYPPGDPAPEGWL----------PELLRGVFEREDSF---- 126 (212)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCCCCCccchhhH----------HHHHHHHHhhhccc----
Confidence 3456899999999999999988863 456899998887543221110000 00000000000000
Q ss_pred hhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCC-ChHHHHHHHhhc-CCcEEEEeCCCCCcccc-cCh
Q psy4974 252 TGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMV-STQQVQSLLNQL-KFCQYYQFSSGGHSCHI-KHG 328 (345)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v-~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~-~~~ 328 (345)
..........+...+..... .....+.+|+.++.+++|... +......+.... ...+...++ ++|+.++ +++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~-g~H~~~~~~~~ 201 (212)
T smart00824 127 VPMDDARLTAMGAYLRLFGG----WTPGPVAAPTLLVRASEPLAEWPDEDPDGWRAHWPLPHTVVDVP-GDHFTMMEEHA 201 (212)
T ss_pred ccccchhhhHHHHHHHHhcc----CCCCCCCCCEEEEeccCCCCCCCCCCcccccCCCCCCceeEEcc-CchHHHHHHhH
Confidence 00000011111111111111 112356789999999998654 222223344433 356777887 7888764 556
Q ss_pred HHHHHHHHHH
Q psy4974 329 QVFNEISRNF 338 (345)
Q Consensus 329 ~~~~~~i~~f 338 (345)
..+.+.+..|
T Consensus 202 ~~~~~~~~~~ 211 (212)
T smart00824 202 AATARAVHDW 211 (212)
T ss_pred HHHHHHHHhh
Confidence 6666666655
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.7e-09 Score=88.85 Aligned_cols=148 Identities=13% Similarity=0.162 Sum_probs=67.1
Q ss_pred HHHHHHHHHHh---CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHH
Q psy4974 165 VDIAYELLKLL---GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVL 241 (345)
Q Consensus 165 ~~~~~~~l~~~---~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
.+...+++... ..++|.|+|.|.||-+|+.+|..+| .|+++|.++|.................+..+.......
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~-- 82 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKF-- 82 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG---
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhc--
Confidence 34445555544 2358999999999999999999998 79999999986653211100000000000000000000
Q ss_pred HHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH-HHHHHHhhc-----C-CcEEE
Q psy4974 242 KAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ-QVQSLLNQL-----K-FCQYY 314 (345)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~-~~~~~~~~~-----~-~~~~~ 314 (345)
...... ... .+. ..... .........-.+.++++|+|+|.|++|.+.|.. .++.+.+++ + +.+++
T Consensus 83 ~~~~~~--~~~-~~~----~~~~~-~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l 154 (213)
T PF08840_consen 83 SWNEPG--LLR-SRY----AFELA-DDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHL 154 (213)
T ss_dssp EE-TTS---EE--TT-----B--T-TTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEE
T ss_pred eecCCc--cee-hhh----hhhcc-cccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEE
Confidence 000000 000 000 00000 000000111235578999999999999999854 444444433 2 46888
Q ss_pred EeCCCCCcc
Q psy4974 315 QFSSGGHSC 323 (345)
Q Consensus 315 ~~~~~gH~~ 323 (345)
.|+++||.+
T Consensus 155 ~Y~~aGH~i 163 (213)
T PF08840_consen 155 SYPGAGHLI 163 (213)
T ss_dssp EETTB-S--
T ss_pred EcCCCCcee
Confidence 999999985
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.4e-09 Score=89.77 Aligned_cols=91 Identities=11% Similarity=0.084 Sum_probs=55.7
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeE---EEEeCCCCchhhhccCCccCCCCCCCCCC-CCCCCccchHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFT---SIFWDPPGNVVLYLLGKTCSGYGQSLPKG-RSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~---vi~~D~~G~~~~~~~g~~~~~~G~s~~~~-~~~~~~~~~~~~~~~~~ 169 (345)
.||||+||.+++....|..+.+.|.++||. |+++++-. ........ ... ..++..+..+.+.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~-------------~~~~~~~~~~~~-~~~~~~~l~~fI~ 67 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGS-------------GNGSPSVQNAHM-SCESAKQLRAFID 67 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S--------------CCHHTHHHHHHB--HHHHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCC-------------CCCCCccccccc-chhhHHHHHHHHH
Confidence 389999999995469999999999999999 89999744 21111000 000 1122334555566
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
+++..-+. +|.||||||||.++..+....
T Consensus 68 ~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 68 AVLAYTGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHT---EEEEEETCHHHHHHHHHHHC
T ss_pred HHHHhhCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 66777788 999999999999999887643
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >KOG1553|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.1e-08 Score=87.05 Aligned_cols=103 Identities=19% Similarity=0.326 Sum_probs=71.6
Q ss_pred CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
+|+..|||+-|..|-- +. - ....-.+.||.|+.+++|| ++.|...+.+. .+ ...++.+.+
T Consensus 241 ngq~LvIC~EGNAGFY-Ev-G-~m~tP~~lgYsvLGwNhPG-------------FagSTG~P~p~---n~-~nA~DaVvQ 300 (517)
T KOG1553|consen 241 NGQDLVICFEGNAGFY-EV-G-VMNTPAQLGYSVLGWNHPG-------------FAGSTGLPYPV---NT-LNAADAVVQ 300 (517)
T ss_pred CCceEEEEecCCccce-Ee-e-eecChHHhCceeeccCCCC-------------ccccCCCCCcc---cc-hHHHHHHHH
Confidence 4556788888876641 11 1 1122234589999999999 99997654332 22 223444444
Q ss_pred H-HHHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 171 L-LKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 171 ~-l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
+ +..++. +.|+|.|||.||..+..+|..+|+ |+++|+-++...
T Consensus 301 fAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDD 346 (517)
T KOG1553|consen 301 FAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDD 346 (517)
T ss_pred HHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhh
Confidence 4 556664 589999999999999999999996 999999887544
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.76 E-value=5.7e-07 Score=76.63 Aligned_cols=214 Identities=14% Similarity=0.176 Sum_probs=121.1
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKL 174 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~ 174 (345)
|+|++-||.+..........+...+.|++++.+-.+- .....+. ..+...++.+.+.+..
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~-------------~~~~~~~-------~~~~~~~~~l~~~l~~ 60 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPP-------------ADFFWPS-------KRLAPAADKLLELLSD 60 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCH-------------HHHeeec-------cchHHHHHHHHHHhhh
Confidence 5778889988855555566665556889999987665 2111110 1344556666666665
Q ss_pred hCCc---cEEEEEeChhHHHHHHHHHh---------CC-cccceeeEeccCCCCCc-hhHHHHHHhHhccCCChh----h
Q psy4974 175 LGVC---KVSLFGWCDGGHLSFVFSMK---------YP-HMVHKLVIWGTKSFLTI-DNVRVFEGMRRLSNWSPM----A 236 (345)
Q Consensus 175 ~~~~---~i~lvGhS~Gg~ia~~~a~~---------~p-~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~ 236 (345)
.... ++.+-.+|.||...+..... .+ .+++++|+-+++..... .....+... +...... .
T Consensus 61 ~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 138 (240)
T PF05705_consen 61 SQSASPPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAA--LPKSSPRWFVPL 138 (240)
T ss_pred hccCCCCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHH--cCccchhhHHHH
Confidence 4433 79999999988766554331 11 24889998887755433 111111111 1111000 0
Q ss_pred HHHHHHHcccCCchhhhh---HHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----
Q psy4974 237 RSEVLKAYDNDVNYITGI---FNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK---- 309 (345)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~---- 309 (345)
.......+... ..... ...........+. ........+|-|+++++.|.+++.+..++..+...
T Consensus 139 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~ 209 (240)
T PF05705_consen 139 WPLLQFLLRLS--IISYFIFGYPDVQEYYRRALN-------DFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGW 209 (240)
T ss_pred HHHHHHHHHHH--HHHHHHhcCCcHHHHHHHHHh-------hhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCC
Confidence 00000000000 00000 0000011111111 11123456899999999999999988777766543
Q ss_pred CcEEEEeCCCCCcccc-cChHHHHHHHHHHH
Q psy4974 310 FCQYYQFSSGGHSCHI-KHGQVFNEISRNFI 339 (345)
Q Consensus 310 ~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 339 (345)
+++...++++.|..|+ ++|++..+.+.+|+
T Consensus 210 ~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 210 DVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred eEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 3678889999999888 68999999999885
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.76 E-value=5e-08 Score=89.21 Aligned_cols=93 Identities=13% Similarity=0.055 Sum_probs=70.6
Q ss_pred hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeC
Q psy4974 107 RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWC 186 (345)
Q Consensus 107 ~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS 186 (345)
...|..+++.|.+.||.+ ..|++| +|.+.+..... ...++++.+.+.++.+..+.++++|+|||
T Consensus 107 ~~~~~~li~~L~~~GY~~-~~dL~g-------------~gYDwR~~~~~--~~~~~~Lk~lIe~~~~~~g~~kV~LVGHS 170 (440)
T PLN02733 107 VYYFHDMIEQLIKWGYKE-GKTLFG-------------FGYDFRQSNRL--PETMDGLKKKLETVYKASGGKKVNIISHS 170 (440)
T ss_pred HHHHHHHHHHHHHcCCcc-CCCccc-------------CCCCccccccH--HHHHHHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 489999999999999766 899999 99886543211 11234445555566666677899999999
Q ss_pred hhHHHHHHHHHhCCcc----cceeeEeccCCCC
Q psy4974 187 DGGHLSFVFSMKYPHM----VHKLVIWGTKSFL 215 (345)
Q Consensus 187 ~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~ 215 (345)
|||.++..++..+|+. |+++|+++++...
T Consensus 171 MGGlva~~fl~~~p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 171 MGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HhHHHHHHHHHHCCHhHHhHhccEEEECCCCCC
Confidence 9999999999888763 7899999876543
|
|
| >KOG3847|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.5e-08 Score=81.53 Aligned_cols=184 Identities=13% Similarity=0.095 Sum_probs=106.9
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCC--C---CCC-------CCCCCCCCcc--
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGY--G---QSL-------PKGRSFVPFQ-- 159 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~--G---~s~-------~~~~~~~~~~-- 159 (345)
|.+||-||++++ +..|..+...|+.+||-|.+++.|-++-. +-...-..| + .+. ..+..+ .+.
T Consensus 119 PvvvFSHGLggs-Rt~YSa~c~~LAShG~VVaavEHRD~SA~-~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef-~irNe 195 (399)
T KOG3847|consen 119 PVVVFSHGLGGS-RTLYSAYCTSLASHGFVVAAVEHRDRSAC-WTYVLKEKHENEPLVEQWIKIRLVEANEKEF-HIRNE 195 (399)
T ss_pred cEEEEecccccc-hhhHHHHhhhHhhCceEEEEeecccCcce-eEEEecccccCCcccccceEeeeeccCceeE-EeeCH
Confidence 899999999999 69999999999999999999999882110 000000000 0 000 000001 000
Q ss_pred chH---HHHHHHHHHHHHhC------------------------CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccC
Q psy4974 160 YIE---EDVDIAYELLKLLG------------------------VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTK 212 (345)
Q Consensus 160 ~~~---~~~~~~~~~l~~~~------------------------~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 212 (345)
... +.+..+..++++++ -.++.++|||+||..++...+.+ .+++..|+++..
T Consensus 196 qv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~W 274 (399)
T KOG3847|consen 196 QVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeeeeee
Confidence 011 11222233343321 12688999999999988877665 458888888875
Q ss_pred CCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCC
Q psy4974 213 SFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSAD 292 (345)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~ 292 (345)
..+-. .....+++.|+++|.-++
T Consensus 275 M~Pl~---------------------------------------------------------~~~~~~arqP~~finv~~ 297 (399)
T KOG3847|consen 275 MFPLD---------------------------------------------------------QLQYSQARQPTLFINVED 297 (399)
T ss_pred ecccc---------------------------------------------------------hhhhhhccCCeEEEEccc
Confidence 44210 222345677999988432
Q ss_pred CCCCChHHHHHHHh---hcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 293 DVMVSTQQVQSLLN---QLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 293 D~~v~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
+--.+....+.+ ...+..++.+.|+=|-.+-+.|-.+-++|.++|.
T Consensus 298 --fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~ 346 (399)
T KOG3847|consen 298 --FQWNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFK 346 (399)
T ss_pred --ccchhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHHHHHhc
Confidence 222233333333 3334577888888887666666555555555553
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.6e-08 Score=85.34 Aligned_cols=105 Identities=11% Similarity=0.075 Sum_probs=58.7
Q ss_pred ceEEEEcCcCCCchhh--------------H----HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC
Q psy4974 94 QVLFFTYGVLGEIRNS--------------F----KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF 155 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~--------------~----~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~ 155 (345)
|.||++||-++.. +. + ..+...|+++||.|+++|.+| +|+........
T Consensus 116 PAVL~lHgHg~~K-e~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g-------------~GER~~~e~~~ 181 (390)
T PF12715_consen 116 PAVLCLHGHGGGK-EKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALG-------------FGERGDMEGAA 181 (390)
T ss_dssp EEEEEE--TT--H-HHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TT-------------SGGG-SSCCCT
T ss_pred CEEEEeCCCCCCc-ccccCCcccccccchhhccccccHHHHHHhCCCEEEEEcccc-------------ccccccccccc
Confidence 7999999977652 22 1 235678999999999999999 98875433211
Q ss_pred CC-ccchHHH---------------HHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCC
Q psy4974 156 VP-FQYIEED---------------VDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 156 ~~-~~~~~~~---------------~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 213 (345)
.. ..+.... +-+....++.+ ..++|.++|+||||..++.+|+.. ++|++.|..+-..
T Consensus 182 ~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l~ 260 (390)
T PF12715_consen 182 QGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYLC 260 (390)
T ss_dssp TTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B-
T ss_pred cccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhhh
Confidence 00 0011111 11122233333 235899999999999999999887 5788888766543
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.9e-06 Score=74.29 Aligned_cols=88 Identities=15% Similarity=0.090 Sum_probs=55.8
Q ss_pred ceEEEEcCcCCCchhhH-------HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSF-------KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVD 166 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~-------~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~ 166 (345)
.-|++.-|.++.- +.. ..+.+...+.|.+|+.+++|| .|.|..... ..++....+
T Consensus 138 RWiL~s~GNg~~~-E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpG-------------Vg~S~G~~s----~~dLv~~~~ 199 (365)
T PF05677_consen 138 RWILVSNGNGECY-ENRAMLDYKDDWIQRFAKELGANVLVFNYPG-------------VGSSTGPPS----RKDLVKDYQ 199 (365)
T ss_pred cEEEEEcCChHHh-hhhhhhccccHHHHHHHHHcCCcEEEECCCc-------------cccCCCCCC----HHHHHHHHH
Confidence 4788888877662 330 122233333478999999999 999965542 123333334
Q ss_pred HHHHHHHH--hC--CccEEEEEeChhHHHHHHHHHhC
Q psy4974 167 IAYELLKL--LG--VCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 167 ~~~~~l~~--~~--~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
.+.+++.. .| .+.+++.|||+||.++..++.++
T Consensus 200 a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 200 ACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 44444432 12 35899999999999988866654
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.73 E-value=9.3e-07 Score=77.17 Aligned_cols=59 Identities=19% Similarity=0.316 Sum_probs=41.8
Q ss_pred CCCCEEEEEeCCCCCCChHHHHHHHhhc-----CCcEEEEeCCCCCcccc-cChHHHHHHHHHHH
Q psy4974 281 VDVPVLVFHSADDVMVSTQQVQSLLNQL-----KFCQYYQFSSGGHSCHI-KHGQVFNEISRNFI 339 (345)
Q Consensus 281 i~~Pvl~i~G~~D~~v~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 339 (345)
.+.|+++.+|..|.++|....+.+.+.+ .++++..+++.+|.... .......++|.+-|
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRF 282 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHH
Confidence 3689999999999999988777776554 35788888999997643 22333334444444
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.1e-07 Score=74.10 Aligned_cols=210 Identities=16% Similarity=0.092 Sum_probs=114.5
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCC-----eEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC--C-CccchHHHHH
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKL-----FTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF--V-PFQYIEEDVD 166 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G-----~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~--~-~~~~~~~~~~ 166 (345)
|.|||||.+|+. .+...++..|.+.+ --++.+|--| -+...|+. --.+..|--.+ + ...+..++..
T Consensus 47 PTIfIhGsgG~a-sS~~~Mv~ql~~~~~~~~e~Lt~~V~~dg--slk~tGk~---~Kd~~nP~I~~gfe~n~~s~~~~s~ 120 (288)
T COG4814 47 PTIFIHGSGGTA-SSLNGMVNQLLPDYKAGTESLTMTVDVDG--SLKVTGKI---SKDAKNPIIEFGFEDNTASGLDQSK 120 (288)
T ss_pred ceEEEecCCCCh-hHHHHHHHHhhhcccccccceEEEEcCCC--cEEEeeee---cccCCCCeEEEEEecCcCchhhHHH
Confidence 899999999995 99999998888763 2355566555 34444544 11111111100 0 1112333344
Q ss_pred HHHHH----HHHhCCccEEEEEeChhHHHHHHHHHhCCc-----ccceeeEeccCCCCCchhHHHHHHhHhccCCChh-h
Q psy4974 167 IAYEL----LKLLGVCKVSLFGWCDGGHLSFVFSMKYPH-----MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPM-A 236 (345)
Q Consensus 167 ~~~~~----l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 236 (345)
++..+ -++.+++++.++||||||.-...|+..+.. .+.++|.++++....... .-+.+..+..-.+. .
T Consensus 121 wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~--~de~v~~v~~~~~~~~ 198 (288)
T COG4814 121 WLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLV--PDETVTDVLKDGPGLI 198 (288)
T ss_pred HHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccC--CCcchheeeccCcccc
Confidence 44433 345678899999999999988888876531 489999998866511000 00000000000000 0
Q ss_pred HHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCC------CCCCChHHHHHHHhhcCC
Q psy4974 237 RSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSAD------DVMVSTQQVQSLLNQLKF 310 (345)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~------D~~v~~~~~~~~~~~~~~ 310 (345)
...... .+... ...+ .-+..+|+|.|+- |..||...+..+...+++
T Consensus 199 ~t~y~~------------------y~~~n---------~k~v-~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~ 250 (288)
T COG4814 199 KTPYYD------------------YIAKN---------YKKV-SPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKK 250 (288)
T ss_pred CcHHHH------------------HHHhc---------ceeC-CCCcEEEEEecccccCCcCCCceechHhHHHHHHhcc
Confidence 000000 00000 0111 1246799999985 456777766666665542
Q ss_pred ---c-E--EEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 311 ---C-Q--YYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 311 ---~-~--~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+ . +..=+++.|.-+.|+| .+.+.+..||-+
T Consensus 251 ~~ksy~e~~~~Gk~a~Hs~lhen~-~v~~yv~~FLw~ 286 (288)
T COG4814 251 NGKSYIESLYKGKDARHSKLHENP-TVAKYVKNFLWE 286 (288)
T ss_pred CcceeEEEeeeCCcchhhccCCCh-hHHHHHHHHhhc
Confidence 2 1 2233458898877765 455777888754
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.6e-07 Score=76.94 Aligned_cols=132 Identities=16% Similarity=0.170 Sum_probs=86.1
Q ss_pred eeeEEEcCceEEEEEcC-----CCCceEEEEcCcCCCchhhHHHHH--HhhCC-CCeEEEEeC-CCCchhhhccCCccCC
Q psy4974 74 EGFFSIKGCDIRFIKYG-----SGAQVLFFTYGVLGEIRNSFKKQL--TAFDP-KLFTSIFWD-PPGNVVLYLLGKTCSG 144 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g-----~~~p~vv~lHG~~~~~~~~~~~~~--~~L~~-~G~~vi~~D-~~G~~~~~~~g~~~~~ 144 (345)
...+.++|....|..+- +++|.||++||..++. ..+.... +.|++ +||-|+.+| ++++-+.--|++.
T Consensus 37 ~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sg-ag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~--- 112 (312)
T COG3509 37 VASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSG-AGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNW--- 112 (312)
T ss_pred ccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCCh-HHhhcccchhhhhcccCcEEECcCccccccCCCccccc---
Confidence 34456677666665442 3447999999999984 5544433 44444 489999996 3331112223333
Q ss_pred CCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCC
Q psy4974 145 YGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 145 ~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 213 (345)
+|.++... ..+....+.+.+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 113 ~~p~~~~~----g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 113 FGPADRRR----GVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CCcccccC----CccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 33332121 3334444455556667777777 89999999999999999999999999998887754
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.5e-08 Score=85.18 Aligned_cols=106 Identities=10% Similarity=0.042 Sum_probs=62.9
Q ss_pred CCCceEEEEcCcCCCc-hhhHHH-HHH-hhCC--CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC-CccchHHH
Q psy4974 91 SGAQVLFFTYGVLGEI-RNSFKK-QLT-AFDP--KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV-PFQYIEED 164 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~-~~~~~~-~~~-~L~~--~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~-~~~~~~~~ 164 (345)
..+|++|++|||.++. ...|.. +.+ .|.. .+++|+++|+.. . .+ ..|. ........
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~-------------~-a~----~~Y~~a~~n~~~v 130 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSR-------------G-AS----NNYPQAVANTRLV 130 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HH-------------H-HS----S-HHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchh-------------h-cc----ccccchhhhHHHH
Confidence 4568999999999885 345644 444 4555 469999999855 2 11 1120 01112222
Q ss_pred HHHHHHHHH----Hh--CCccEEEEEeChhHHHHHHHHHhCCc--ccceeeEeccCCC
Q psy4974 165 VDIAYELLK----LL--GVCKVSLFGWCDGGHLSFVFSMKYPH--MVHKLVIWGTKSF 214 (345)
Q Consensus 165 ~~~~~~~l~----~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 214 (345)
.+.+..++. .. ..++++|||||+||.+|-.++..... +|.++..++|+..
T Consensus 131 g~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 131 GRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 233333332 33 35699999999999999999988776 8999999999765
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >KOG3253|consensus | Back alignment and domain information |
|---|
Probab=98.60 E-value=8.1e-07 Score=81.26 Aligned_cols=158 Identities=15% Similarity=0.098 Sum_probs=104.7
Q ss_pred CceEEEEcCcCC----Cc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLG----EI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~----~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
.|.++++||.+. +. .+.|........+. ..|.++|++. + .|. . .+...++.
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gev-vev~tfdl~n---------~---igG-------~----nI~h~ae~ 231 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEV-VEVPTFDLNN---------P---IGG-------A----NIKHAAEY 231 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhcee-eeeccccccC---------C---CCC-------c----chHHHHHH
Confidence 368899999881 11 23444455444444 7788888876 0 121 1 33334444
Q ss_pred HHHHHH--------HhCCccEEEEEeChhHHHHHHHHHhCC-cccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHH
Q psy4974 168 AYELLK--------LLGVCKVSLFGWCDGGHLSFVFSMKYP-HMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS 238 (345)
Q Consensus 168 ~~~~l~--------~~~~~~i~lvGhS~Gg~ia~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (345)
+..+.+ ++...+|+|+|+|||+.++.+.+.... ..|+++|+++-+........
T Consensus 232 ~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr------------------ 293 (784)
T KOG3253|consen 232 SVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR------------------ 293 (784)
T ss_pred HHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc------------------
Confidence 444433 234568999999999888888776543 34889998875443211100
Q ss_pred HHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-CcEEEEeC
Q psy4974 239 EVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-FCQYYQFS 317 (345)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~ 317 (345)
....+.+-.++.|+|++.|.+|..+++...++++++.. ..+++++.
T Consensus 294 ---------------------------------girDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~ 340 (784)
T KOG3253|consen 294 ---------------------------------GIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIG 340 (784)
T ss_pred ---------------------------------CCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEec
Confidence 00023345678899999999999999999999998874 57899999
Q ss_pred CCCCcccc
Q psy4974 318 SGGHSCHI 325 (345)
Q Consensus 318 ~~gH~~~~ 325 (345)
+++|.+-.
T Consensus 341 ~adhsmai 348 (784)
T KOG3253|consen 341 GADHSMAI 348 (784)
T ss_pred CCCccccC
Confidence 99998754
|
|
| >KOG4840|consensus | Back alignment and domain information |
|---|
Probab=98.60 E-value=2e-06 Score=69.20 Aligned_cols=102 Identities=13% Similarity=0.049 Sum_probs=75.6
Q ss_pred ceEEEEcCcCCC--chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGE--IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 94 p~vv~lHG~~~~--~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
-.|||+-|++.. ....-..+..+|.+.+|.++-+.++. + ...| ...++.+.++++..+
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~S-------------s------y~G~-Gt~slk~D~edl~~l 96 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRS-------------S------YNGY-GTFSLKDDVEDLKCL 96 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccc-------------c------cccc-ccccccccHHHHHHH
Confidence 478888888765 22445667889999999999998876 1 1112 223677779999999
Q ss_pred HHHhCC----ccEEEEEeChhHHHHHHHHHh--CCcccceeeEeccCCCC
Q psy4974 172 LKLLGV----CKVSLFGWCDGGHLSFVFSMK--YPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 172 l~~~~~----~~i~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~ 215 (345)
+++++. .+|+|+|||.|+.-.++|..+ .+..+++.|+.+|....
T Consensus 97 ~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 97 LEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred HHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 997753 289999999999888887743 35678889999887653
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.4e-05 Score=72.66 Aligned_cols=56 Identities=21% Similarity=0.355 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHHHHh---C--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 160 YIEEDVDIAYELLKLL---G--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 160 ~~~~~~~~~~~~l~~~---~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
++++.+....++++.+ . ..+.+|+|-|.||+.++.+|+.+|+.+.-+|+-+++...
T Consensus 117 Tl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 117 TLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSY 177 (581)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccc
Confidence 5666666555555554 1 238999999999999999999999999888888775543
|
Their function is unknown. |
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.3e-05 Score=74.23 Aligned_cols=127 Identities=14% Similarity=0.144 Sum_probs=77.0
Q ss_pred eeeeEEEc---CceEEEEEcC-----CCCceEEEEcCcCCCchhhHHHHHHh-------------------hCCCCeEEE
Q psy4974 73 TEGFFSIK---GCDIRFIKYG-----SGAQVLFFTYGVLGEIRNSFKKQLTA-------------------FDPKLFTSI 125 (345)
Q Consensus 73 ~~~~~~~~---g~~l~~~~~g-----~~~p~vv~lHG~~~~~~~~~~~~~~~-------------------L~~~G~~vi 125 (345)
...++.++ +..++|.-.. +.+|.||++.|++|++ ..+-.+.+. +.+. .+++
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~S-S~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l 89 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCS-SMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLL 89 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB--THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEE
T ss_pred EEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceec-cccccccccCceEEeecccccccccccccccc-cceE
Confidence 35677776 5677765432 2448999999999986 666433210 1122 6789
Q ss_pred EeCCC-CchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh-------CCccEEEEEeChhHHHHHHHHH
Q psy4974 126 FWDPP-GNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLL-------GVCKVSLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 126 ~~D~~-G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~i~lvGhS~Gg~ia~~~a~ 197 (345)
.+|.| | .|.|......- ...+.++.++++.+++..+ ...+++|.|-|.||..+..+|.
T Consensus 90 ~iD~PvG-------------tGfS~~~~~~~-~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~ 155 (415)
T PF00450_consen 90 FIDQPVG-------------TGFSYGNDPSD-YVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALAS 155 (415)
T ss_dssp EE--STT-------------STT-EESSGGG-GS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHH
T ss_pred EEeecCc-------------eEEeecccccc-ccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHH
Confidence 99955 7 77775433221 1224566677777666654 3458999999999988777665
Q ss_pred h----C------CcccceeeEeccCCCC
Q psy4974 198 K----Y------PHMVHKLVIWGTKSFL 215 (345)
Q Consensus 198 ~----~------p~~v~~lvl~~~~~~~ 215 (345)
. . +-.++++++.++....
T Consensus 156 ~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 156 YILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred hhhhccccccccccccccceecCccccc
Confidence 3 2 2358899998886654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.7e-05 Score=68.59 Aligned_cols=216 Identities=11% Similarity=0.023 Sum_probs=118.7
Q ss_pred eeeEEEcCceEE--EEEcCCCC--ceEEEEcCcCCCch--hhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCcc-----
Q psy4974 74 EGFFSIKGCDIR--FIKYGSGA--QVLFFTYGVLGEIR--NSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTC----- 142 (345)
Q Consensus 74 ~~~~~~~g~~l~--~~~~g~~~--p~vv~lHG~~~~~~--~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~----- 142 (345)
..++..++.++- |+.+..++ -.||++||.+.+.. ..-..+...|.+.|++.+++.+|.-...+.-....
T Consensus 64 ~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~ 143 (310)
T PF12048_consen 64 VQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEV 143 (310)
T ss_pred cEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCC
Confidence 344555444332 33333332 38999999988731 33455667888999999999887700000000000
Q ss_pred CCCCCC--CCCCCC-----------CC-CccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCc-ccceee
Q psy4974 143 SGYGQS--LPKGRS-----------FV-PFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH-MVHKLV 207 (345)
Q Consensus 143 ~~~G~s--~~~~~~-----------~~-~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~-~v~~lv 207 (345)
..-+.. +.+... +. ....+....+.+.+++...+..+++|+||+.|+..++.+....+. .++++|
T Consensus 144 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV 223 (310)
T PF12048_consen 144 PSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALV 223 (310)
T ss_pred CCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEE
Confidence 000000 000000 00 000111223334444555566679999999999999998888753 589999
Q ss_pred EeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEE
Q psy4974 208 IWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLV 287 (345)
Q Consensus 208 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~ 287 (345)
++++........ ..+.+.+.++++|||=
T Consensus 224 ~I~a~~p~~~~n----------------------------------------------------~~l~~~la~l~iPvLD 251 (310)
T PF12048_consen 224 LINAYWPQPDRN----------------------------------------------------PALAEQLAQLKIPVLD 251 (310)
T ss_pred EEeCCCCcchhh----------------------------------------------------hhHHHHhhccCCCEEE
Confidence 999965532110 1113345667899999
Q ss_pred EEeCCCCCCChH--HHHHHHhhc--CCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 288 FHSADDVMVSTQ--QVQSLLNQL--KFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 288 i~G~~D~~v~~~--~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
|++.....+-.. .-+...++. ++.+...+.+..|...- ..+.+.+.|..||+.+
T Consensus 252 i~~~~~~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~-~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 252 IYSADNPASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSG-WQEQLLRRIRGWLKRH 309 (310)
T ss_pred EecCCChHHHHHHHHHHHHHHhccCCCceeEecCCCCCChhh-HHHHHHHHHHHHHHhh
Confidence 998873322211 112222222 24566667666664432 2334889999999864
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=4e-06 Score=76.69 Aligned_cols=105 Identities=8% Similarity=0.009 Sum_probs=64.2
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCC----eEEEEeCCCCchhhhccCCccCCC-CCCCCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKL----FTSIFWDPPGNVVLYLLGKTCSGY-GQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G----~~vi~~D~~G~~~~~~~g~~~~~~-G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
-|+|+++||............+..|.++| ..++.+|... . .++. .-.. .......++++
T Consensus 209 ~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~-------------~~~R~~--el~~-~~~f~~~l~~e 272 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAID-------------TTHRSQ--ELPC-NADFWLAVQQE 272 (411)
T ss_pred CCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCC-------------cccccc--cCCc-hHHHHHHHHHH
Confidence 37899999954321111223444554444 4567887533 1 1110 0000 11122334566
Q ss_pred HHHHHHHh-----CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCC
Q psy4974 168 AYELLKLL-----GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 168 ~~~~l~~~-----~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 213 (345)
+.-++++. +.++.+|+|+||||..|+.++.++|+.+.+++.+++..
T Consensus 273 LlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 273 LLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 66666553 23478999999999999999999999999999999864
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.5e-06 Score=71.94 Aligned_cols=106 Identities=11% Similarity=0.134 Sum_probs=64.8
Q ss_pred CCceEEEEcCcCCCchhhHHH---HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKK---QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.+..+||+||+..+....... +...+.-. -.++.+.+|+ .|.-.. -.. +......-...+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~-~~~i~FsWPS-------------~g~~~~--Y~~-d~~~a~~s~~~l 79 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFP-GVVILFSWPS-------------DGSLLG--YFY-DRESARFSGPAL 79 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCC-ceEEEEEcCC-------------CCChhh--hhh-hhhhHHHHHHHH
Confidence 446999999998883222222 33333333 3899999999 654211 000 111222334444
Q ss_pred HHHHHHh----CCccEEEEEeChhHHHHHHHHHhC----C-----cccceeeEeccCCC
Q psy4974 169 YELLKLL----GVCKVSLFGWCDGGHLSFVFSMKY----P-----HMVHKLVIWGTKSF 214 (345)
Q Consensus 169 ~~~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~----p-----~~v~~lvl~~~~~~ 214 (345)
.+++..+ +.++|+|++||||+.+.+.+.... + .++..+|+++|-..
T Consensus 80 ~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 80 ARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred HHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 4444443 567999999999999988876541 1 25778888887554
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.1e-05 Score=60.60 Aligned_cols=89 Identities=15% Similarity=0.126 Sum_probs=60.0
Q ss_pred EEEEcCcCCCchhhHHHH--HHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 96 LFFTYGVLGEIRNSFKKQ--LTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 96 vv~lHG~~~~~~~~~~~~--~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|+++||+.+|+ ...... .+.+.+. .. - .+.+.+.... +....++.+..++.
T Consensus 2 ilYlHGFnSSP-~shka~l~~q~~~~~-~~-------~-------------i~y~~p~l~h-----~p~~a~~ele~~i~ 54 (191)
T COG3150 2 ILYLHGFNSSP-GSHKAVLLLQFIDED-VR-------D-------------IEYSTPHLPH-----DPQQALKELEKAVQ 54 (191)
T ss_pred eEEEecCCCCc-ccHHHHHHHHHHhcc-cc-------c-------------eeeecCCCCC-----CHHHHHHHHHHHHH
Confidence 79999999985 555443 2444443 22 2 2222221111 45667888888898
Q ss_pred HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 174 LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 174 ~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
..+.+...|+|-|+||+.|..++.++. +++ |+++|...
T Consensus 55 ~~~~~~p~ivGssLGGY~At~l~~~~G--ira-v~~NPav~ 92 (191)
T COG3150 55 ELGDESPLIVGSSLGGYYATWLGFLCG--IRA-VVFNPAVR 92 (191)
T ss_pred HcCCCCceEEeecchHHHHHHHHHHhC--Chh-hhcCCCcC
Confidence 888778999999999999999999875 444 45566544
|
|
| >KOG3101|consensus | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.6e-06 Score=69.23 Aligned_cols=197 Identities=16% Similarity=0.205 Sum_probs=103.6
Q ss_pred CceEEEEcCcCCCchhhHHH---HHHhhCCCCeEEEEeCC--CCchhhhccCCc-cCCCCCCC-----CCCCCCC-Cccc
Q psy4974 93 AQVLFFTYGVLGEIRNSFKK---QLTAFDPKLFTSIFWDP--PGNVVLYLLGKT-CSGYGQSL-----PKGRSFV-PFQY 160 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~---~~~~L~~~G~~vi~~D~--~G~~~~~~~g~~-~~~~G~s~-----~~~~~~~-~~~~ 160 (345)
-|++.++.|+.+.. ..|.. +-+.-+++|+.|+++|- || +-..|-. +-.+|.-. ...++|. ...-
T Consensus 44 ~P~lf~LSGLTCT~-~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG---~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrM 119 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTH-ENFIEKSGFQQQASKHGLAVVAPDTSPRG---VEVAGDDESWDFGQGAGFYVNATQEPWAKHYRM 119 (283)
T ss_pred CceEEEecCCcccc-hhhHhhhhHHHhHhhcCeEEECCCCCCCc---cccCCCcccccccCCceeEEecccchHhhhhhH
Confidence 38999999999884 55533 22344567999999994 44 1111110 00011100 0001110 0011
Q ss_pred hHHHHHHHHHHHHH----hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhh
Q psy4974 161 IEEDVDIAYELLKL----LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMA 236 (345)
Q Consensus 161 ~~~~~~~~~~~l~~----~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (345)
++-.++.+.+++.. +...++.|.||||||.=|+..+.+.|.+.+.+-..+|...+..-. | -
T Consensus 120 YdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cp------------W---G 184 (283)
T KOG3101|consen 120 YDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCP------------W---G 184 (283)
T ss_pred HHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCc------------c---h
Confidence 22224444555542 223479999999999999999999999999888888765532111 0 0
Q ss_pred HHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCCh----HHHHHHHhhc--CC
Q psy4974 237 RSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST----QQVQSLLNQL--KF 310 (345)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~----~~~~~~~~~~--~~ 310 (345)
...+...++.+ ...+..++...+..........+|+=.|+.|.+.+. +...+..+.. ..
T Consensus 185 qKAf~gYLG~~---------------ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~ 249 (283)
T KOG3101|consen 185 QKAFTGYLGDN---------------KAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAP 249 (283)
T ss_pred HHHhhcccCCC---------------hHHHhhcchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhcccccc
Confidence 11111111111 112222222233444455566789999999987662 2222222211 12
Q ss_pred cEEEEeCCCCCcc
Q psy4974 311 CQYYQFSSGGHSC 323 (345)
Q Consensus 311 ~~~~~~~~~gH~~ 323 (345)
+.+...+|-.|..
T Consensus 250 v~~r~~~gyDHSY 262 (283)
T KOG3101|consen 250 VVFRLQEGYDHSY 262 (283)
T ss_pred EEEEeecCCCcce
Confidence 4556667778864
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.9e-06 Score=76.89 Aligned_cols=103 Identities=19% Similarity=0.090 Sum_probs=79.7
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeE---EEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFT---SIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~---vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
-+++++||++++ ...|..+...+...|+. ++.+++++ - .. ... ....-++....+.+
T Consensus 60 ~pivlVhG~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------~-~~--~~~---~~~~~~ql~~~V~~ 119 (336)
T COG1075 60 EPIVLVHGLGGG-YGNFLPLDYRLAILGWLTNGVYAFELSG-------------G-DG--TYS---LAVRGEQLFAYVDE 119 (336)
T ss_pred ceEEEEccCcCC-cchhhhhhhhhcchHHHhcccccccccc-------------c-CC--Ccc---ccccHHHHHHHHHH
Confidence 489999999777 48898888888888887 89999887 3 11 111 11134455666667
Q ss_pred HHHHhCCccEEEEEeChhHHHHHHHHHhCC--cccceeeEeccCCCCC
Q psy4974 171 LLKLLGVCKVSLFGWCDGGHLSFVFSMKYP--HMVHKLVIWGTKSFLT 216 (345)
Q Consensus 171 ~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~~ 216 (345)
.+...+.+++.|+||||||.+...++...+ .+|+.++.++++-...
T Consensus 120 ~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 120 VLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred HHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 777778889999999999999999999887 7899999999876543
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.5e-05 Score=70.69 Aligned_cols=119 Identities=15% Similarity=0.132 Sum_probs=75.8
Q ss_pred cCceEEEEEcC-----CCCceEEEEcCcCCCc---hhhH---HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCC
Q psy4974 80 KGCDIRFIKYG-----SGAQVLFFTYGVLGEI---RNSF---KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS 148 (345)
Q Consensus 80 ~g~~l~~~~~g-----~~~p~vv~lHG~~~~~---~~~~---~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s 148 (345)
+...++....+ +.+|+||++||+|-.- .... ..+...|. . ..++++|+.- .. |
T Consensus 104 d~~s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~-~SILvLDYsL-------------t~-~ 167 (374)
T PF10340_consen 104 DSQSYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-E-VSILVLDYSL-------------TS-S 167 (374)
T ss_pred ccceEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-C-CeEEEEeccc-------------cc-c
Confidence 34445555532 2358999999987541 1111 22334444 3 6999999865 21 0
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC-----cccceeeEeccCCCCC
Q psy4974 149 LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP-----HMVHKLVIWGTKSFLT 216 (345)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~ 216 (345)
......| + ..+.+.++....+++..|.+.|+|+|-|.||.+++.+.+... ...+++|+++|.....
T Consensus 168 ~~~~~~y-P-tQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 168 DEHGHKY-P-TQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred ccCCCcC-c-hHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 1112222 2 245666777777787778889999999999999988775421 2368999999977654
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.29 E-value=5.4e-05 Score=62.08 Aligned_cols=182 Identities=13% Similarity=0.178 Sum_probs=98.6
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEE-EEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTS-IFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~v-i~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
+..|||+.||+.+. ..+..+. +. .++.| +++|+|. . +.+ . +
T Consensus 11 ~~LilfF~GWg~d~-~~f~hL~--~~-~~~D~l~~yDYr~-------------l-----------~~d-~-----~---- 52 (213)
T PF04301_consen 11 KELILFFAGWGMDP-SPFSHLI--LP-ENYDVLICYDYRD-------------L-----------DFD-F-----D---- 52 (213)
T ss_pred CeEEEEEecCCCCh-HHhhhcc--CC-CCccEEEEecCcc-------------c-----------ccc-c-----c----
Confidence 45899999999884 6665542 22 23554 5678776 2 110 0 0
Q ss_pred HHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch----hHHHHHHhHhccCCChhhHHHHHHHcccC
Q psy4974 172 LKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID----NVRVFEGMRRLSNWSPMARSEVLKAYDND 247 (345)
Q Consensus 172 l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
+ -+.+.+.|||+|||-++|..+....| ++..|.+++...+... .+..+... +..+.+..+..+.+.+...
T Consensus 53 ~--~~y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~Pid~~~GIpp~iF~~T--l~~l~ee~~~kF~rrmcg~ 126 (213)
T PF04301_consen 53 L--SGYREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPYPIDDEYGIPPAIFAGT--LENLSEENLQKFNRRMCGD 126 (213)
T ss_pred c--ccCceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCCCcCCCCCCCHHHHHHH--HHhCCHHHHHHHHHHhcCC
Confidence 1 13579999999999999988766543 6667777765543221 12222221 1223333333343333222
Q ss_pred Cchh-------hh-hHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCC
Q psy4974 248 VNYI-------TG-IFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSG 319 (345)
Q Consensus 248 ~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~ 319 (345)
.... .. ..+....++...+....... ....-.=...+.|++|.++|++..+..-+.. +.+..++ +
T Consensus 127 ~~~~~~f~~~~~r~~~~elk~EL~~l~~~~~~~~----~~~~~~wd~aiIg~~D~IFpp~nQ~~~W~~~--~~~~~~~-~ 199 (213)
T PF04301_consen 127 KELLEKFQSFPPRRSFEELKEELAALYEFIKKNP----PADLFHWDKAIIGKKDRIFPPENQKRAWQGR--CTIVEID-A 199 (213)
T ss_pred chhhHHhhcCCcCCCHHHHHHHHHHHHHHHhccC----CCCCccccEEEEcCCCEEeCHHHHHHHHhCc--CcEEEec-C
Confidence 1000 11 12333344444433221110 0000012358899999999998887777643 4566675 8
Q ss_pred CCcccc
Q psy4974 320 GHSCHI 325 (345)
Q Consensus 320 gH~~~~ 325 (345)
+|+++.
T Consensus 200 ~Hy~F~ 205 (213)
T PF04301_consen 200 PHYPFF 205 (213)
T ss_pred CCcCch
Confidence 999864
|
|
| >KOG1551|consensus | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.5e-05 Score=64.68 Aligned_cols=227 Identities=13% Similarity=0.119 Sum_probs=119.3
Q ss_pred ceEEEEcCcCCCchhhHH-HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH-----
Q psy4974 94 QVLFFTYGVLGEIRNSFK-KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI----- 167 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~-~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~----- 167 (345)
+..+++-|-+++. ..=+ -+...+.++|...+.++-|- ||+..++..-. ..-+.+.|
T Consensus 114 ~KOG~~a~tgdh~-y~rr~~L~~p~~k~~i~tmvle~pf-------------Ygqr~p~~q~~----~~Le~vtDlf~mG 175 (371)
T KOG1551|consen 114 DLCLSWALTGDHV-YTRRLVLSKPINKREIATMVLEKPF-------------YGQRVPEEQII----HMLEYVTDLFKMG 175 (371)
T ss_pred CeeEEEeecCCce-eEeeeeecCchhhhcchheeeeccc-------------ccccCCHHHHH----HHHHHHHHHHHhh
Confidence 4666666666553 2212 23345556678888999999 88875443110 11111111
Q ss_pred ---HHHHH------HHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHH----HHHHhHhccCCCh
Q psy4974 168 ---AYELL------KLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVR----VFEGMRRLSNWSP 234 (345)
Q Consensus 168 ---~~~~l------~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~----~~~~~~~~~~~~~ 234 (345)
|.+.. ...|..+..++|-||||.+|......++..|.-+=++++.......... ....+.....-
T Consensus 176 ~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~-- 253 (371)
T KOG1551|consen 176 RATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQT-- 253 (371)
T ss_pred HHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhhhhhhhhHHHHhhccC--
Confidence 11211 2235669999999999999999998776656655555543221111100 01111111100
Q ss_pred hhHHHHHHHcccCCchhhhh---HHHHHHHHHHHHHhhCchhhhccCCCCCC-----CEEEEEeCCCCCCChHHHHHHHh
Q psy4974 235 MARSEVLKAYDNDVNYITGI---FNQYVDMVNLIFKSYGRNVYQELLPYVDV-----PVLVFHSADDVMVSTQQVQSLLN 306 (345)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-----Pvl~i~G~~D~~v~~~~~~~~~~ 306 (345)
.......+...... +.... .+.-.++...+++..-.. ...+....+ -+.++.+++|..+|......+.+
T Consensus 254 t~~~~~~~r~p~Q~-~~~~~~~~srn~~~E~~~~Mr~vmd~--~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~ 330 (371)
T KOG1551|consen 254 TNKSGYTSRNPAQS-YHLLSKEQSRNSRKESLIFMRGVMDE--CTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQE 330 (371)
T ss_pred cchhhhhhhCchhh-HHHHHHHhhhcchHHHHHHHHHHHHh--hchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHH
Confidence 00000000000000 00000 000001111111111000 011222222 26788899999999988899999
Q ss_pred hcCCcEEEEeCCCCCcc-cccChHHHHHHHHHHHHhhcc
Q psy4974 307 QLKFCQYYQFSSGGHSC-HIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 307 ~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~~k 344 (345)
..|++++..++ +||.. .+-+-+.+.++|.+-|++.+|
T Consensus 331 ~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 331 IWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred hCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhhhh
Confidence 99999999998 89974 446678999999999987654
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.9e-05 Score=67.73 Aligned_cols=97 Identities=15% Similarity=0.096 Sum_probs=62.1
Q ss_pred ceEEEEcCcCC--CchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 94 QVLFFTYGVLG--EIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 94 p~vv~lHG~~~--~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
.|||++||+++ +. ..+..+.+.+.+. |..+..+. .| -+.. .. -+..+.+.++.+.+
T Consensus 27 ~PvViwHGlgD~~~~-~~~~~~~~~i~~~~~~pg~~v~-ig-------------~~~~----~s--~~~~~~~Qv~~vce 85 (306)
T PLN02606 27 VPFVLFHGFGGECSN-GKVSNLTQFLINHSGYPGTCVE-IG-------------NGVQ----DS--LFMPLRQQASIACE 85 (306)
T ss_pred CCEEEECCCCcccCC-chHHHHHHHHHhCCCCCeEEEE-EC-------------CCcc----cc--cccCHHHHHHHHHH
Confidence 48999999994 43 5666676666422 55444444 34 2211 11 11234444444443
Q ss_pred HHHH---hCCccEEEEEeChhHHHHHHHHHhCCc--ccceeeEeccC
Q psy4974 171 LLKL---LGVCKVSLFGWCDGGHLSFVFSMKYPH--MVHKLVIWGTK 212 (345)
Q Consensus 171 ~l~~---~~~~~i~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 212 (345)
-+.. +. +-++++|+|.||.++-.++.+.|+ .|+.+|.++++
T Consensus 86 ~l~~~~~L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 86 KIKQMKELS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred HHhcchhhc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 3333 22 369999999999999999999876 59999999874
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.5e-06 Score=70.41 Aligned_cols=85 Identities=16% Similarity=0.165 Sum_probs=48.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCC--CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHH----HH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPK--LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDV----DI 167 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~--G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~----~~ 167 (345)
-.|||+||+.|+. ..|..+...+... .+.-..+...+ +... ... +.+.++..+ +.
T Consensus 5 hLvV~vHGL~G~~-~d~~~~~~~l~~~~~~~~~~~i~~~~-------------~~~n--~~~---T~~gI~~~g~rL~~e 65 (217)
T PF05057_consen 5 HLVVFVHGLWGNP-ADMRYLKNHLEKIPEDLPNARIVVLG-------------YSNN--EFK---TFDGIDVCGERLAEE 65 (217)
T ss_pred EEEEEeCCCCCCH-HHHHHHHHHHHHhhhhcchhhhhhhc-------------cccc--ccc---cchhhHHHHHHHHHH
Confidence 4899999999995 8888777666551 12211222222 1111 011 222344444 44
Q ss_pred HHHHHHHhCC--ccEEEEEeChhHHHHHHHHH
Q psy4974 168 AYELLKLLGV--CKVSLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 168 ~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~ 197 (345)
+.+.++.... .++.+|||||||.++-.+..
T Consensus 66 I~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 66 ILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHhccccccccccceEEEecccHHHHHHHHH
Confidence 4444444343 38999999999999876554
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.0001 Score=68.58 Aligned_cols=125 Identities=16% Similarity=0.031 Sum_probs=82.6
Q ss_pred eeEEE-cCceEEEEEcCC---CC-ceEEEEcCcCCCch--hhH--HHHHH---hhCCCCeEEEEeCCCCchhhhccCCcc
Q psy4974 75 GFFSI-KGCDIRFIKYGS---GA-QVLFFTYGVLGEIR--NSF--KKQLT---AFDPKLFTSIFWDPPGNVVLYLLGKTC 142 (345)
Q Consensus 75 ~~~~~-~g~~l~~~~~g~---~~-p~vv~lHG~~~~~~--~~~--~~~~~---~L~~~G~~vi~~D~~G~~~~~~~g~~~ 142 (345)
..+.. ||++|+...+-+ ++ |+++..+-++-... ..+ ....+ .++.+||.|+..|.||
T Consensus 22 v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG----------- 90 (563)
T COG2936 22 VMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRG----------- 90 (563)
T ss_pred eeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccc-----------
Confidence 33444 999998666532 33 77777772221110 011 11233 6888999999999999
Q ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 143 SGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 143 ~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.|.|+..-..+ ... -.++..|+++++.+... .+|..+|.|++|...+.+|+..|.-+++++.+.+...
T Consensus 91 --~~~SeG~~~~~-~~~-E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 91 --RGGSEGVFDPE-SSR-EAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred --cccCCccccee-ccc-cccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 99997655443 111 12234455566555433 4899999999999999999998888899888877554
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.15 E-value=3.3e-05 Score=67.54 Aligned_cols=66 Identities=17% Similarity=0.204 Sum_probs=52.3
Q ss_pred CCCCC-CCEEEEEeCCCCCCChHHHHHHHhhcCC--cEEEEeCCCCCcccccChH---HHHHHHHHHHHhhc
Q psy4974 278 LPYVD-VPVLVFHSADDVMVSTQQVQSLLNQLKF--CQYYQFSSGGHSCHIKHGQ---VFNEISRNFILEEN 343 (345)
Q Consensus 278 l~~i~-~Pvl~i~G~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~---~~~~~i~~fl~~~~ 343 (345)
+..+. +|+|+++|.+|.++|...+..+...... .+...+++++|........ +..+.+.+|+.+..
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 33444 7999999999999999999888887755 5777888999988764433 67888999988754
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.02 E-value=4.6e-05 Score=66.35 Aligned_cols=107 Identities=14% Similarity=0.159 Sum_probs=64.7
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCC--eEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKL--FTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G--~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
++..+||+||++-+-...-...++-....| ...+.+-+|. -|.- -.-.| +-++...-..++.
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS-------------~g~l--~~Yn~-DreS~~~Sr~aLe 178 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPS-------------RGSL--LGYNY-DRESTNYSRPALE 178 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCC-------------CCee--eeccc-chhhhhhhHHHHH
Confidence 445899999997762233333443333333 6678888888 3321 11111 2223333344444
Q ss_pred HHHHHh----CCccEEEEEeChhHHHHHHHHHhC--------CcccceeeEeccCCC
Q psy4974 170 ELLKLL----GVCKVSLFGWCDGGHLSFVFSMKY--------PHMVHKLVIWGTKSF 214 (345)
Q Consensus 170 ~~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~~ 214 (345)
.+++.+ ..++|+|++||||.++++....+. +.+++.+|+-+|-..
T Consensus 179 ~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 179 RLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred HHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 444443 466899999999999999877652 346788888877554
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00045 Score=59.49 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=61.8
Q ss_pred ceEEEEcCcCCCch-hhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIR-NSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 94 p~vv~lHG~~~~~~-~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
.|+|+.||+|++.. .....+.+.+.+. |..+.++.. | .+ ....| +..+.+.++.+.+-
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g---------------~~--~~~s~--~~~~~~Qve~vce~ 85 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-G---------------NG--VGDSW--LMPLTQQAEIACEK 85 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-C---------------CC--ccccc--eeCHHHHHHHHHHH
Confidence 48999999998731 2334444444332 566666653 3 22 11222 22344444444443
Q ss_pred HHH---hCCccEEEEEeChhHHHHHHHHHhCCc--ccceeeEeccC
Q psy4974 172 LKL---LGVCKVSLFGWCDGGHLSFVFSMKYPH--MVHKLVIWGTK 212 (345)
Q Consensus 172 l~~---~~~~~i~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 212 (345)
+.. +. +-++++|+|.||.++-.++.+.|+ .|+.+|.++++
T Consensus 86 l~~~~~l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 86 VKQMKELS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred Hhhchhhh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 333 22 369999999999999999999876 59999999874
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.00 E-value=3e-05 Score=56.47 Aligned_cols=60 Identities=13% Similarity=0.298 Sum_probs=54.5
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
..|+|++.++.|+++|.+.++.+++.+++++++.+++.||........-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 589999999999999999999999999999999999999998865557778899999974
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00027 Score=63.08 Aligned_cols=157 Identities=13% Similarity=0.111 Sum_probs=97.8
Q ss_pred HHHHHHHh---CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc-CCChhhHHHHHHH
Q psy4974 168 AYELLKLL---GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS-NWSPMARSEVLKA 243 (345)
Q Consensus 168 ~~~~l~~~---~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 243 (345)
+.+++++. .++++++.|.|==|..++..|+ ...||++++-+.-... ..........+... .|...+......-
T Consensus 159 vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~L--N~~~~l~h~y~~yG~~ws~a~~dY~~~g 235 (367)
T PF10142_consen 159 VQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVL--NMKANLEHQYRSYGGNWSFAFQDYYNEG 235 (367)
T ss_pred HHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccC--CcHHHHHHHHHHhCCCCccchhhhhHhC
Confidence 33455544 5779999999999999999988 4467888875543222 11112222233333 3333322222211
Q ss_pred cccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC-cEEEEeCCCCCc
Q psy4974 244 YDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF-CQYYQFSSGGHS 322 (345)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~gH~ 322 (345)
+... + ....+..+....+...+. .++.+|-++|.|..|++..+.....+...+|+ ..+..+|+++|.
T Consensus 236 i~~~------l---~tp~f~~L~~ivDP~~Y~---~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~ 303 (367)
T PF10142_consen 236 ITQQ------L---DTPEFDKLMQIVDPYSYR---DRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHS 303 (367)
T ss_pred chhh------c---CCHHHHHHHHhcCHHHHH---HhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcc
Confidence 1111 0 011222233333333333 44588999999999999999999999999985 567788999998
Q ss_pred ccccChHHHHHHHHHHHHhh
Q psy4974 323 CHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 323 ~~~~~~~~~~~~i~~fl~~~ 342 (345)
... ..+.+.+..|+...
T Consensus 304 ~~~---~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 304 LIG---SDVVQSLRAFYNRI 320 (367)
T ss_pred cch---HHHHHHHHHHHHHH
Confidence 875 67777888888653
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.012 Score=54.33 Aligned_cols=60 Identities=15% Similarity=0.257 Sum_probs=47.9
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhhcC------------------------C-cEEEEeCCCCCcccccChHHHHHHHH
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQLK------------------------F-CQYYQFSSGGHSCHIKHGQVFNEISR 336 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~~~~~~~~~~i~ 336 (345)
..+||+..|+.|.+|+.-..+.+.+.+. + .+++.+.+|||... .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 4799999999999999877777655431 1 35667788999996 68999999999
Q ss_pred HHHHhh
Q psy4974 337 NFILEE 342 (345)
Q Consensus 337 ~fl~~~ 342 (345)
.|+...
T Consensus 426 ~Fi~~~ 431 (433)
T PLN03016 426 RWISGQ 431 (433)
T ss_pred HHHcCC
Confidence 999653
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.91 E-value=2e-05 Score=67.56 Aligned_cols=52 Identities=8% Similarity=0.125 Sum_probs=40.8
Q ss_pred HHHHHHHHHHH-hCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 164 DVDIAYELLKL-LGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 164 ~~~~~~~~l~~-~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
..+++..+++. +... +..|+|+||||..|+.++.++|+.+.++++++|....
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 34566655554 3322 3799999999999999999999999999999987553
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=97.88 E-value=7.5e-05 Score=70.74 Aligned_cols=110 Identities=11% Similarity=0.109 Sum_probs=64.7
Q ss_pred CCceEEEEcCcCCC--chhhHHHHHHhhCC-C-CeEEEEeCCC-CchhhhccCCccCCCCCCCC--CCCCCCCccchHHH
Q psy4974 92 GAQVLFFTYGVLGE--IRNSFKKQLTAFDP-K-LFTSIFWDPP-GNVVLYLLGKTCSGYGQSLP--KGRSFVPFQYIEED 164 (345)
Q Consensus 92 ~~p~vv~lHG~~~~--~~~~~~~~~~~L~~-~-G~~vi~~D~~-G~~~~~~~g~~~~~~G~s~~--~~~~~~~~~~~~~~ 164 (345)
..|+||+|||++-. +...+ ....|.. . |+.|+.+++| | ..| +..+.. ....+ .+.+....
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg-----~~g-----~~~~~~~~~~~n~-g~~D~~~a 160 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLG-----VLG-----FLSTGDIELPGNY-GLKDQRLA 160 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEeccccc-----ccc-----cccCCCCCCCcch-hHHHHHHH
Confidence 34899999997532 01221 1122322 2 4999999999 4 001 222211 11222 22233334
Q ss_pred HHHHHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 165 VDIAYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 165 ~~~~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
.+++.+.+..++. ++|.|+|+|.||..+..++... +..++++|+.++...
T Consensus 161 l~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 161 LKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 4555555666654 4899999999999988877652 346888888887544
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0081 Score=55.55 Aligned_cols=59 Identities=17% Similarity=0.278 Sum_probs=47.6
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhhc------------------------CC-cEEEEeCCCCCcccccChHHHHHHHH
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQL------------------------KF-CQYYQFSSGGHSCHIKHGQVFNEISR 336 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~~------------------------~~-~~~~~~~~~gH~~~~~~~~~~~~~i~ 336 (345)
.++||+..|+.|.+|+....+.+.+.+ .+ .+++.+.+|||... .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 479999999999999987777765544 12 45667788999995 69999999999
Q ss_pred HHHHh
Q psy4974 337 NFILE 341 (345)
Q Consensus 337 ~fl~~ 341 (345)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0002 Score=65.35 Aligned_cols=113 Identities=18% Similarity=0.147 Sum_probs=67.1
Q ss_pred EcCceEEEEEcCCCCceEEEEc-CcCCCchhhHHHHHHhhCCCCeE------EEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 79 IKGCDIRFIKYGSGAQVLFFTY-GVLGEIRNSFKKQLTAFDPKLFT------SIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 79 ~~g~~l~~~~~g~~~p~vv~lH-G~~~~~~~~~~~~~~~L~~~G~~------vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
..|+.+.....|... .|-.+- ..... ...|..+++.|.+.||. ..-+|+|- +..
T Consensus 37 ~~gv~i~~~~~g~~~-~i~~ld~~~~~~-~~~~~~li~~L~~~GY~~~~~l~~~pYDWR~----------------~~~- 97 (389)
T PF02450_consen 37 DPGVEIRVPGFGGTS-GIEYLDPSFITG-YWYFAKLIENLEKLGYDRGKDLFAAPYDWRL----------------SPA- 97 (389)
T ss_pred CCCceeecCCCCcee-eeeecccccccc-cchHHHHHHHHHhcCcccCCEEEEEeechhh----------------chh-
Confidence 356666655555211 233332 22222 24899999999887764 22268776 100
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCc------ccceeeEeccCCCC
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH------MVHKLVIWGTKSFL 215 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~------~v~~lvl~~~~~~~ 215 (345)
. ....+..+.+.+.+..+. ..++++|+||||||.++..+....+. .|+++|.++++...
T Consensus 98 ~----~~~~~~~lk~~ie~~~~~-~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 98 E----RDEYFTKLKQLIEEAYKK-NGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred h----HHHHHHHHHHHHHHHHHh-cCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 0 001222333333333332 35799999999999999998887643 49999999986553
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >KOG3724|consensus | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00039 Score=66.24 Aligned_cols=100 Identities=14% Similarity=0.131 Sum_probs=57.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhC----------------CCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFD----------------PKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~----------------~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
-||+||+|..|+ ...-+.++.... ...|+.+++|+-+ +- ..+ .
T Consensus 90 IPVLFIPGNAGS-yKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE---------------e~----tAm-~ 148 (973)
T KOG3724|consen 90 IPVLFIPGNAGS-YKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE---------------EF----TAM-H 148 (973)
T ss_pred ceEEEecCCCCc-hHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc---------------hh----hhh-c
Confidence 389999999999 366666553322 1126677777644 10 011 1
Q ss_pred ccchHHHHHHHHH----HHHHhCC---------ccEEEEEeChhHHHHHHHHHh---CCcccceeeEeccCCC
Q psy4974 158 FQYIEEDVDIAYE----LLKLLGV---------CKVSLFGWCDGGHLSFVFSMK---YPHMVHKLVIWGTKSF 214 (345)
Q Consensus 158 ~~~~~~~~~~~~~----~l~~~~~---------~~i~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~ 214 (345)
...+.++++.+.+ +++.... ..++|+||||||.+|..++.. .++.|.-++..+++-.
T Consensus 149 G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 149 GHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred cHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 1233344333332 3332221 249999999999999887753 2345666666665443
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00016 Score=65.75 Aligned_cols=119 Identities=10% Similarity=0.027 Sum_probs=70.1
Q ss_pred CCCceEEEEcCcCCCc--hhhHHHHHHhhCCCC-eEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEI--RNSFKKQLTAFDPKL-FTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~--~~~~~~~~~~L~~~G-~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
++.|++|+|||++-.. ......-...|+++| +-|+++++|-.--=+|.... ++..+...... .+.+.....++
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~---~~~~~~~~~n~-Gl~DqilALkW 167 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSS---LDTEDAFASNL-GLLDQILALKW 167 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhh---ccccccccccc-cHHHHHHHHHH
Confidence 3458999999976321 122112235677887 99999998850000111111 22111111222 22233333566
Q ss_pred HHHHHHHhCCc--cEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCC
Q psy4974 168 AYELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSF 214 (345)
Q Consensus 168 ~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~ 214 (345)
+.+-++++|-+ .|.|+|+|.||+.++.+.+- | ..++++|+.++...
T Consensus 168 V~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 168 VRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 66777788755 79999999999988776653 4 35788888888765
|
|
| >KOG2541|consensus | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00035 Score=58.27 Aligned_cols=98 Identities=16% Similarity=0.173 Sum_probs=66.5
Q ss_pred ceEEEEcCcCCCchhh--HHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNS--FKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~--~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
.|+|++||.+++. .. ...+.+.+.+. |..|+++|. | -| . ... .+....+.++.+.+
T Consensus 24 ~P~ii~HGigd~c-~~~~~~~~~q~l~~~~g~~v~~lei-g-------------~g--~--~~s--~l~pl~~Qv~~~ce 82 (296)
T KOG2541|consen 24 VPVIVWHGIGDSC-SSLSMANLTQLLEELPGSPVYCLEI-G-------------DG--I--KDS--SLMPLWEQVDVACE 82 (296)
T ss_pred CCEEEEeccCccc-ccchHHHHHHHHHhCCCCeeEEEEe-c-------------CC--c--chh--hhccHHHHHHHHHH
Confidence 4899999999874 43 56666666555 789999996 4 33 0 111 22344555555555
Q ss_pred HHHHhC--CccEEEEEeChhHHHHHHHHHhCC-cccceeeEeccC
Q psy4974 171 LLKLLG--VCKVSLFGWCDGGHLSFVFSMKYP-HMVHKLVIWGTK 212 (345)
Q Consensus 171 ~l~~~~--~~~i~lvGhS~Gg~ia~~~a~~~p-~~v~~lvl~~~~ 212 (345)
.++... .+-++++|.|.||.++-.++...+ ..|+.+|.++++
T Consensus 83 ~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 83 KVKQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred HHhcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 554332 246899999999999999998754 358899988864
|
|
| >KOG1282|consensus | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.018 Score=53.08 Aligned_cols=60 Identities=15% Similarity=0.219 Sum_probs=48.1
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHhhc---------C----------------CcEEEEeCCCCCcccccChHHHHHHHHH
Q psy4974 283 VPVLVFHSADDVMVSTQQVQSLLNQL---------K----------------FCQYYQFSSGGHSCHIKHGQVFNEISRN 337 (345)
Q Consensus 283 ~Pvl~i~G~~D~~v~~~~~~~~~~~~---------~----------------~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 337 (345)
.++++..|+.|.++|.-..+.+.+.+ | +..+..+.|+||.+..++|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 68999999999999987666654332 1 1234677899999999999999999999
Q ss_pred HHHhh
Q psy4974 338 FILEE 342 (345)
Q Consensus 338 fl~~~ 342 (345)
||...
T Consensus 444 fl~g~ 448 (454)
T KOG1282|consen 444 FLNGQ 448 (454)
T ss_pred HHcCC
Confidence 99764
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00056 Score=63.41 Aligned_cols=224 Identities=16% Similarity=0.161 Sum_probs=121.0
Q ss_pred cCceEEEEEcCC-----CCceEEEEcCcCCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC---C
Q psy4974 80 KGCDIRFIKYGS-----GAQVLFFTYGVLGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL---P 150 (345)
Q Consensus 80 ~g~~l~~~~~g~-----~~p~vv~lHG~~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~---~ 150 (345)
||.+|.|...++ ..|++|+--|+..-+ ...|......+-++|...+..+.|| -+++|..= .
T Consensus 403 DGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRG----------GGEfGp~WH~Aa 472 (648)
T COG1505 403 DGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRG----------GGEFGPEWHQAG 472 (648)
T ss_pred CCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEeccc----------CCccCHHHHHHH
Confidence 999999987642 246777766655432 1345555566667888888899999 11122110 0
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCC---ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhH
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGV---CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMR 227 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 227 (345)
.... ....+++...-+..++++ ++ +++.+.|-|-||.+.-.+..++|+.+.++|+--|...+-.. ..+.
T Consensus 473 ~k~n--rq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRY-----h~l~ 544 (648)
T COG1505 473 MKEN--KQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRY-----HLLT 544 (648)
T ss_pred hhhc--chhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhh-----cccc
Confidence 0000 111233334333333332 43 48899999999999988889999988888876664432110 0000
Q ss_pred hccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCC--CCCCEEEEEeCCCCCCChHHHHHHH
Q psy4974 228 RLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPY--VDVPVLVFHSADDVMVSTQQVQSLL 305 (345)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~Pvl~i~G~~D~~v~~~~~~~~~ 305 (345)
.-..| + .-|+.. -.+. ....+..+.. ...++. .=-|+|+-.+..|.-|.+.++++++
T Consensus 545 aG~sW-------~-~EYG~P--d~P~--------d~~~l~~YSP---y~nl~~g~kYP~~LITTs~~DDRVHPaHarKfa 603 (648)
T COG1505 545 AGSSW-------I-AEYGNP--DDPE--------DRAFLLAYSP---YHNLKPGQKYPPTLITTSLHDDRVHPAHARKFA 603 (648)
T ss_pred cchhh-------H-hhcCCC--CCHH--------HHHHHHhcCc---hhcCCccccCCCeEEEcccccccccchHHHHHH
Confidence 00000 0 111111 0000 1111111211 122221 1148999999999988888999988
Q ss_pred hhcCC--c--EEEEeCCCCCcccccChH--HHHHHHHHHHHhh
Q psy4974 306 NQLKF--C--QYYQFSSGGHSCHIKHGQ--VFNEISRNFILEE 342 (345)
Q Consensus 306 ~~~~~--~--~~~~~~~~gH~~~~~~~~--~~~~~i~~fl~~~ 342 (345)
..+.. . -+.+=.++||..--...+ .-...+..||.+.
T Consensus 604 a~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~ 646 (648)
T COG1505 604 AKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRT 646 (648)
T ss_pred HHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHh
Confidence 87742 2 233334689986544332 2334455666543
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00041 Score=64.60 Aligned_cols=106 Identities=19% Similarity=0.249 Sum_probs=65.5
Q ss_pred eEEEEcCcCCCchhhH--HHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCC----CCCCCccchHHHHHH
Q psy4974 95 VLFFTYGVLGEIRNSF--KKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG----RSFVPFQYIEEDVDI 167 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~--~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~----~~~~~~~~~~~~~~~ 167 (345)
||++.-|+-+.....| ..+...|+++ |-.++++++|- +|.|.+.. ... ..-+.++..+|
T Consensus 30 pifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRy-------------YG~S~P~~~~s~~nL-~yLt~~QALaD 95 (434)
T PF05577_consen 30 PIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRY-------------YGKSQPFGDLSTENL-RYLTSEQALAD 95 (434)
T ss_dssp EEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TT-------------STTB-TTGGGGGSTT-TC-SHHHHHHH
T ss_pred CEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhh-------------hcCCCCccccchhhH-HhcCHHHHHHH
Confidence 4555556655531222 2244455554 78999999999 99996532 122 23356777788
Q ss_pred HHHHHHHhC-------CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 168 AYELLKLLG-------VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 168 ~~~~l~~~~-------~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
+..+++.+. ..|++++|-|.||.+|..+-.++|+.|.+.+.-+++..
T Consensus 96 ~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 96 LAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred HHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 887776653 13899999999999999999999999999998887654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.016 Score=49.23 Aligned_cols=103 Identities=13% Similarity=0.166 Sum_probs=73.1
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|.|+++-...|+-....+...+.|... ..|+.-|+-. --.-+...+.| +++++.+.+.+.+.
T Consensus 104 PkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~d-------------Ar~Vp~~~G~F----dldDYIdyvie~~~ 165 (415)
T COG4553 104 PKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVD-------------ARMVPLEAGHF----DLDDYIDYVIEMIN 165 (415)
T ss_pred CeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccc-------------cceeecccCCc----cHHHHHHHHHHHHH
Confidence 567777777666335667777888776 7888888766 33333345556 67778999999999
Q ss_pred HhCCccEEEEEeChhH-----HHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 174 LLGVCKVSLFGWCDGG-----HLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 174 ~~~~~~i~lvGhS~Gg-----~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
.+|.+ +++++-|.=+ .++++.+...|.....+++++++...
T Consensus 166 ~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 166 FLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred HhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 99965 7888888764 44555555567778899999887653
|
|
| >KOG3967|consensus | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00055 Score=55.04 Aligned_cols=110 Identities=10% Similarity=0.137 Sum_probs=66.7
Q ss_pred CceEEEEcCcCCCchhhHHH---------------HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 93 AQVLFFTYGVLGEIRNSFKK---------------QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~---------------~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
+..+|+|||.|--....|.. .++.-.+.||.|+..+.-- +..+-.+...+..|
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~----------~~kfye~k~np~ky-- 168 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNR----------ERKFYEKKRNPQKY-- 168 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCch----------hhhhhhcccCcchh--
Confidence 34899999988653355632 2344446689999887531 11122221122222
Q ss_pred ccchHHHHHHHH-HHHHHhCCccEEEEEeChhHHHHHHHHHhCCc--ccceeeEeccCCC
Q psy4974 158 FQYIEEDVDIAY-ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH--MVHKLVIWGTKSF 214 (345)
Q Consensus 158 ~~~~~~~~~~~~-~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 214 (345)
..+-.+.+..+- .++.-...+.+.++.||.||...+.+..++|+ +|.++.+.+++..
T Consensus 169 irt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~ 228 (297)
T KOG3967|consen 169 IRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMG 228 (297)
T ss_pred ccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccccc
Confidence 112223333222 33444456789999999999999999999874 6778888777644
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0016 Score=58.21 Aligned_cols=36 Identities=14% Similarity=0.210 Sum_probs=31.2
Q ss_pred cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 179 KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 179 ~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
|++++|+|.||++|...|.-.|..+++++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999998888876665544
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0016 Score=57.94 Aligned_cols=113 Identities=13% Similarity=0.152 Sum_probs=86.4
Q ss_pred eEEEEEcCCCCceEEEEcCcCCCchhhH-HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccch
Q psy4974 83 DIRFIKYGSGAQVLFFTYGVLGEIRNSF-KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYI 161 (345)
Q Consensus 83 ~l~~~~~g~~~p~vv~lHG~~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~ 161 (345)
++...+.+...|+|+..-|.+.+. ... ......|. -+-+.+++|- ++.|.+.+.++ ..-++
T Consensus 53 RvtLlHk~~drPtV~~T~GY~~~~-~p~r~Ept~Lld---~NQl~vEhRf-------------F~~SrP~p~DW-~~Lti 114 (448)
T PF05576_consen 53 RVTLLHKDFDRPTVLYTEGYNVST-SPRRSEPTQLLD---GNQLSVEHRF-------------FGPSRPEPADW-SYLTI 114 (448)
T ss_pred EEEEEEcCCCCCeEEEecCccccc-CccccchhHhhc---cceEEEEEee-------------ccCCCCCCCCc-ccccH
Confidence 455556666778999999987763 322 23333332 4678899999 99999888888 77788
Q ss_pred HHHHHHHHHHHHHhC---CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCC
Q psy4974 162 EEDVDIAYELLKLLG---VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~---~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 213 (345)
.+.+.|..++++++. ..+.+-.|-|=||+.++.+=.-+|+.|++.|.--.+.
T Consensus 115 ~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 115 WQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred hHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 888999888887764 3478889999999999998888999999988765543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00051 Score=60.32 Aligned_cols=38 Identities=13% Similarity=0.129 Sum_probs=34.3
Q ss_pred cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCC
Q psy4974 179 KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLT 216 (345)
Q Consensus 179 ~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 216 (345)
+..|+||||||.=|+.+|.++|++++.+..+++.....
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 68999999999999999999999999999988876644
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.026 Score=47.22 Aligned_cols=101 Identities=13% Similarity=0.057 Sum_probs=58.1
Q ss_pred eEEEEcCcC--CCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 95 VLFFTYGVL--GEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 95 ~vv~lHG~~--~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
+|=|+-|.. ..+.-.|+.+++.|+++||.|++.-+.- |.. .... ....+.+.-..+..+.
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~--------------tfD---H~~~-A~~~~~~f~~~~~~L~ 80 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV--------------TFD---HQAI-AREVWERFERCLRALQ 80 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC--------------CCc---HHHH-HHHHHHHHHHHHHHHH
Confidence 344444422 2356789999999999999999987643 100 0000 0001111111222222
Q ss_pred HHhCC----ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCC
Q psy4974 173 KLLGV----CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 173 ~~~~~----~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 213 (345)
+..+. -+++-+|||+|+-+-+.+...++..-++.|+++-..
T Consensus 81 ~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN 125 (250)
T PF07082_consen 81 KRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNN 125 (250)
T ss_pred HhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEecCC
Confidence 22222 267889999999988888877765556777776543
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00061 Score=60.21 Aligned_cols=85 Identities=21% Similarity=0.131 Sum_probs=59.2
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
...-||+.|=||- +..=+.+.+.|+++|+.|+.+|-.- |-.+.+ +-++.++|+..++
T Consensus 260 d~~av~~SGDGGW-r~lDk~v~~~l~~~gvpVvGvdsLR-------------YfW~~r---------tPe~~a~Dl~r~i 316 (456)
T COG3946 260 DTVAVFYSGDGGW-RDLDKEVAEALQKQGVPVVGVDSLR-------------YFWSER---------TPEQIAADLSRLI 316 (456)
T ss_pred ceEEEEEecCCch-hhhhHHHHHHHHHCCCceeeeehhh-------------hhhccC---------CHHHHHHHHHHHH
Confidence 3456777776665 3555668899999999999999655 444433 2344466666555
Q ss_pred HH----hCCccEEEEEeChhHHHHHHHHHhCC
Q psy4974 173 KL----LGVCKVSLFGWCDGGHLSFVFSMKYP 200 (345)
Q Consensus 173 ~~----~~~~~i~lvGhS~Gg~ia~~~a~~~p 200 (345)
+. .+..++.|+|+|+|+-+.-..-.+.|
T Consensus 317 ~~y~~~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 317 RFYARRWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHHHHhhCcceEEEEeecccchhhHHHHHhCC
Confidence 54 56679999999999988766555555
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00044 Score=59.00 Aligned_cols=102 Identities=16% Similarity=0.119 Sum_probs=52.2
Q ss_pred ceEEEEcCcCCCch--hhHH---HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIR--NSFK---KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 94 p~vv~lHG~~~~~~--~~~~---~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.|||+.||++++.. ..+. .+++.... |.-|.+++.-. +.++..... -+..+.+.++.+
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~P-G~yV~si~ig~--------------~~~~D~~~s--~f~~v~~Qv~~v 68 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHP-GTYVHSIEIGN--------------DPSEDVENS--FFGNVNDQVEQV 68 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHST-T--EEE--SSS--------------SHHHHHHHH--HHSHHHHHHHHH
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCC-CceEEEEEECC--------------Ccchhhhhh--HHHHHHHHHHHH
Confidence 48999999997521 2333 34444433 67888888622 211000000 112344555555
Q ss_pred HHHHHHhC--CccEEEEEeChhHHHHHHHHHhCCc-ccceeeEeccC
Q psy4974 169 YELLKLLG--VCKVSLFGWCDGGHLSFVFSMKYPH-MVHKLVIWGTK 212 (345)
Q Consensus 169 ~~~l~~~~--~~~i~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~ 212 (345)
.+.+.... .+-++++|+|.||.++-.++.+.|+ .|+.+|.++++
T Consensus 69 c~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 69 CEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp HHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred HHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 55555422 1469999999999999999999864 69999999874
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.11 Score=46.27 Aligned_cols=59 Identities=15% Similarity=0.252 Sum_probs=47.0
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhhcC------------------------C-cEEEEeCCCCCcccccChHHHHHHHH
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQLK------------------------F-CQYYQFSSGGHSCHIKHGQVFNEISR 336 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~~~~~~~~~~i~ 336 (345)
.++||+..|+.|.+|+.-..+.+.+.+. + .+++.+.+|||+.. .+|++..+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4799999999999999776666655441 1 45566778999996 58999999999
Q ss_pred HHHHh
Q psy4974 337 NFILE 341 (345)
Q Consensus 337 ~fl~~ 341 (345)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99965
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.017 Score=44.50 Aligned_cols=179 Identities=12% Similarity=0.178 Sum_probs=92.6
Q ss_pred eEEEEcCcCCCchhhHHHHHHhhCCCCeE-EEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEIRNSFKKQLTAFDPKLFT-SIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~~~~~L~~~G~~-vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
.||++-||+..+ ..+..++ +.++ +. ++++|+.. . .-++ ++.
T Consensus 13 LIvyFaGwgtpp-s~v~HLi--lpeN-~dl~lcYDY~d-------------l------~ldf-Dfs-------------- 54 (214)
T COG2830 13 LIVYFAGWGTPP-SAVNHLI--LPEN-HDLLLCYDYQD-------------L------NLDF-DFS-------------- 54 (214)
T ss_pred EEEEEecCCCCH-HHHhhcc--CCCC-CcEEEEeehhh-------------c------Cccc-chh--------------
Confidence 788888887775 6666553 4444 54 56888877 3 2222 111
Q ss_pred HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh----HHHHHHhHhccCCChhhHHHHHHHcccCC-
Q psy4974 174 LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN----VRVFEGMRRLSNWSPMARSEVLKAYDNDV- 248 (345)
Q Consensus 174 ~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (345)
..+.+.++++|||-.+|-++....+ ++..+.+++........ ...+... +.......+-.+.+.+..+.
T Consensus 55 --Ay~hirlvAwSMGVwvAeR~lqg~~--lksatAiNGTgLpcDds~GIp~AIF~gT--L~nl~e~nr~kFerricg~k~ 128 (214)
T COG2830 55 --AYRHIRLVAWSMGVWVAERVLQGIR--LKSATAINGTGLPCDDSFGIPPAIFKGT--LENLTENNRLKFERRICGDKA 128 (214)
T ss_pred --hhhhhhhhhhhHHHHHHHHHHhhcc--ccceeeecCCCCCccccCCCCHHHHHHH--HhccchhhHHHHHHHHhcccc
Confidence 1246789999999999999887764 67777777644322211 1222211 11222222222222222211
Q ss_pred ------chhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCc
Q psy4974 249 ------NYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHS 322 (345)
Q Consensus 249 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~ 322 (345)
.+...-....-..+...+.......-.+.+. =.-.+.|++|.+.|+.....+.+. .+.+..+. ++|+
T Consensus 129 ~l~~yq~f~~rp~~eIh~El~alfa~i~Qdrr~dli~----W~ka~v~skDkIFpp~nq~ayw~~--rc~v~ei~-g~H~ 201 (214)
T COG2830 129 SLEDYQIFPARPFLEIHQELTALFAMIQQDRRTDLIL----WDKAYVGSKDKIFPPANQHAYWNA--RCAVIEIN-GEHY 201 (214)
T ss_pred cchhhhccCcChHHHHHHHHHHHHHHHhhhhhhhhhh----hhhhhccCCCcccCCcchhhhhcc--ceeEEEec-Ccce
Confidence 0111112222223333332222111011111 112567899999998877666553 46777785 7887
Q ss_pred cc
Q psy4974 323 CH 324 (345)
Q Consensus 323 ~~ 324 (345)
.+
T Consensus 202 ~F 203 (214)
T COG2830 202 LF 203 (214)
T ss_pred EE
Confidence 54
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0014 Score=51.50 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=31.1
Q ss_pred CCccEEEEEeChhHHHHHHHHHhCCc----ccceeeEeccCCC
Q psy4974 176 GVCKVSLFGWCDGGHLSFVFSMKYPH----MVHKLVIWGTKSF 214 (345)
Q Consensus 176 ~~~~i~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~ 214 (345)
...+++++|||+||.+|..++..... .+..++.++++..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 55799999999999999998887644 4667777777654
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.028 Score=53.20 Aligned_cols=109 Identities=17% Similarity=0.138 Sum_probs=70.4
Q ss_pred CceEEEEcCcCCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCC----CCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS----LPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s----~~~~~~~~~~~~~~~~~~~ 167 (345)
.|.++.--|.-|.+ ...|....-.|.++||--...-.|| |.- .|.. .+... -..++.+..+.
T Consensus 448 ~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRG-------Gge---lG~~WYe~GK~l~---K~NTf~DFIa~ 514 (682)
T COG1770 448 APLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRG-------GGE---LGRAWYEDGKLLN---KKNTFTDFIAA 514 (682)
T ss_pred CcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeec-------ccc---cChHHHHhhhhhh---ccccHHHHHHH
Confidence 36777777765552 2344444445677887766667777 111 1211 01111 12256666666
Q ss_pred HHHHHHHh--CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 168 AYELLKLL--GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 168 ~~~~l~~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
...+++.- ..+.++++|-|.||+++-..+...|+.++++|+--|...
T Consensus 515 a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 515 ARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred HHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 66665542 234799999999999999999999999999998888655
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.00062 Score=65.15 Aligned_cols=115 Identities=10% Similarity=0.044 Sum_probs=59.3
Q ss_pred CceEEEEcCcCCCch-h--hHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIR-N--SFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~-~--~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
.|++|+|||++-... . ....-...++.++.-||.+++|= -.-|+.+ .+....+...+ .+.+.....+++.
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRl----g~~Gfl~--~~~~~~~~gN~-Gl~Dq~~AL~WV~ 197 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRL----GAFGFLS--LGDLDAPSGNY-GLLDQRLALKWVQ 197 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE--------HHHHH-B--SSSTTSHBSTH-HHHHHHHHHHHHH
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccc----ccccccc--ccccccCchhh-hhhhhHHHHHHHH
Confidence 389999999764310 1 12222233445679999999985 1111110 01111111333 2222333344555
Q ss_pred HHHHHhCCc--cEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 170 ELLKLLGVC--KVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 170 ~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
+-+..+|-+ +|.|+|||.||..+....... ...++++|+.++...
T Consensus 198 ~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 198 DNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 556666644 899999999998877766542 246999999998543
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0024 Score=49.20 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 163 EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
...+.+.++++..+..++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 3455566666666656899999999999999888763
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >KOG2183|consensus | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0045 Score=55.02 Aligned_cols=106 Identities=30% Similarity=0.443 Sum_probs=70.7
Q ss_pred CCCceEEEEcCcCCCchhhHHH---HHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC-------CCCcc
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFKK---QLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS-------FVPFQ 159 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~~---~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~-------~~~~~ 159 (345)
.+.-||+|.-|.-|+. +.|.. ++-.++++ +--++..+.|- +|+|-+-... . ..-
T Consensus 78 ~g~gPIffYtGNEGdi-e~Fa~ntGFm~D~Ap~~~AllVFaEHRy-------------YGeS~PFG~~s~k~~~hl-gyL 142 (492)
T KOG2183|consen 78 KGEGPIFFYTGNEGDI-EWFANNTGFMWDLAPELKALLVFAEHRY-------------YGESLPFGSQSYKDARHL-GYL 142 (492)
T ss_pred CCCCceEEEeCCcccH-HHHHhccchHHhhhHhhCceEEEeehhc-------------cccCCCCcchhccChhhh-ccc
Confidence 3434899998987773 44432 22333333 56788999999 9988543221 1 222
Q ss_pred chHHHHHHHHHHHHHhC------CccEEEEEeChhHHHHHHHHHhCCcccceeeEecc
Q psy4974 160 YIEEDVDIAYELLKLLG------VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGT 211 (345)
Q Consensus 160 ~~~~~~~~~~~~l~~~~------~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 211 (345)
+.++...|...++..+. ..+++.+|-|.||++|..+=.++|+.|.+...-+.
T Consensus 143 tseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSA 200 (492)
T KOG2183|consen 143 TSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASA 200 (492)
T ss_pred cHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccC
Confidence 34455556666665553 23899999999999999999999998877665554
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.012 Score=49.67 Aligned_cols=38 Identities=13% Similarity=0.304 Sum_probs=34.2
Q ss_pred CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 177 VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 177 ~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.++-.|+|||+||.+++.....+|+.+...++++|...
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 34789999999999999999999999999999998654
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0056 Score=51.21 Aligned_cols=50 Identities=16% Similarity=0.220 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC----cccceeeEeccCCCC
Q psy4974 165 VDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP----HMVHKLVIWGTKSFL 215 (345)
Q Consensus 165 ~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~~~~ 215 (345)
++.+..+++..+ .++.+.|||.||.+|..+|...+ ++|.++...+++...
T Consensus 72 ~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 72 LAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 444555555554 36999999999999999988743 478888888887653
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0051 Score=57.72 Aligned_cols=90 Identities=7% Similarity=-0.095 Sum_probs=52.5
Q ss_pred hhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH----HhCCccEEEE
Q psy4974 108 NSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK----LLGVCKVSLF 183 (345)
Q Consensus 108 ~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~i~lv 183 (345)
..|..+++.|++.||. .-++.| ....-+.... ..+..+++...+..+++ .-+-+|++|+
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~g-------------APYDWRls~~--~le~rd~YF~rLK~lIE~ay~~nggkKVVLV 218 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYM-------------AAYDWRLSFQ--NTEVRDQTLSRLKSNIELMVATNGGKKVVVV 218 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceee-------------cccccccCcc--chhhhhHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 5678999999998886 344444 2111000000 01111222233333333 2235799999
Q ss_pred EeChhHHHHHHHHHhCC---------------cccceeeEeccCCC
Q psy4974 184 GWCDGGHLSFVFSMKYP---------------HMVHKLVIWGTKSF 214 (345)
Q Consensus 184 GhS~Gg~ia~~~a~~~p---------------~~v~~lvl~~~~~~ 214 (345)
||||||.+++.+..... ..|+++|.++++..
T Consensus 219 ~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 219 PHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred EeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccC
Confidence 99999999999765321 24788999888644
|
|
| >KOG2237|consensus | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.023 Score=53.44 Aligned_cols=113 Identities=17% Similarity=0.195 Sum_probs=70.7
Q ss_pred CCceEEEEcCcCCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC-CccchHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV-PFQYIEEDVDIAY 169 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~-~~~~~~~~~~~~~ 169 (345)
.+|.+|..+|+.+-+ ...|+.-.--|.+.|+.....|.|| |- ++|..-...+... -...+.+....+.
T Consensus 469 ~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRG-------GG---e~G~~WHk~G~lakKqN~f~Dfia~Ae 538 (712)
T KOG2237|consen 469 SKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRG-------GG---EYGEQWHKDGRLAKKQNSFDDFIACAE 538 (712)
T ss_pred CCceEEEEecccceeeccccccceeEEEecceEEEEEeecc-------Cc---ccccchhhccchhhhcccHHHHHHHHH
Confidence 347788888765542 2445544444556889888999999 11 1333211111000 1224444454444
Q ss_pred HHHHHh--CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 170 ELLKLL--GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 170 ~~l~~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.++++- ...+..+.|.|.||.++..++-++|+.+.++|+-.|...
T Consensus 539 yLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 539 YLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred HHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 444431 234899999999999999999999999999888776544
|
|
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.19 Score=51.06 Aligned_cols=99 Identities=17% Similarity=0.267 Sum_probs=68.4
Q ss_pred CCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 90 GSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 90 g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
.+..|+++|+|..-|.. ..+..++..|. .|- ||.... +.- +.+++++.+....
T Consensus 2120 ~se~~~~Ffv~pIEG~t-t~l~~la~rle----------~Pa-------------YglQ~T--~~v-P~dSies~A~~yi 2172 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFT-TALESLASRLE----------IPA-------------YGLQCT--EAV-PLDSIESLAAYYI 2172 (2376)
T ss_pred cccCCceEEEeccccch-HHHHHHHhhcC----------Ccc-------------hhhhcc--ccC-CcchHHHHHHHHH
Confidence 34557999999998884 67776665543 233 443321 111 5567888888777
Q ss_pred HHHHHhCC-ccEEEEEeChhHHHHHHHHHhCC--cccceeeEeccCCCC
Q psy4974 170 ELLKLLGV-CKVSLFGWCDGGHLSFVFSMKYP--HMVHKLVIWGTKSFL 215 (345)
Q Consensus 170 ~~l~~~~~-~~i~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~ 215 (345)
.-++++.. .++.++|+|+|+.++..+|.... +....+|++++.+..
T Consensus 2173 rqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2173 RQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred HHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 77777654 48999999999999999987642 335669999886543
|
|
| >KOG2369|consensus | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0049 Score=55.89 Aligned_cols=88 Identities=17% Similarity=0.097 Sum_probs=56.3
Q ss_pred hhhHHHHHHhhCCCCeE------EEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccE
Q psy4974 107 RNSFKKQLTAFDPKLFT------SIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKV 180 (345)
Q Consensus 107 ~~~~~~~~~~L~~~G~~------vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 180 (345)
...|..+++.|..-||. -..+|+|- |-...+. ....+.++...++...+.-|.+|+
T Consensus 123 y~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl----------------s~~~~e~--rd~yl~kLK~~iE~~~~~~G~kkV 184 (473)
T KOG2369|consen 123 YWYWHELIENLVGIGYERGKTLFGAPYDWRL----------------SYHNSEE--RDQYLSKLKKKIETMYKLNGGKKV 184 (473)
T ss_pred hHHHHHHHHHHHhhCcccCceeeccccchhh----------------ccCChhH--HHHHHHHHHHHHHHHHHHcCCCce
Confidence 35888999999887776 34567665 1111110 111233444444444444466899
Q ss_pred EEEEeChhHHHHHHHHHhCCc--------ccceeeEeccC
Q psy4974 181 SLFGWCDGGHLSFVFSMKYPH--------MVHKLVIWGTK 212 (345)
Q Consensus 181 ~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~ 212 (345)
+|++|||||.+.+++...+++ -|++++-++++
T Consensus 185 vlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 185 VLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred EEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCch
Confidence 999999999999999988765 26666666653
|
|
| >KOG2521|consensus | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.058 Score=47.89 Aligned_cols=232 Identities=11% Similarity=0.104 Sum_probs=116.3
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
...+||++=||.|..............+.||.++.+-.|. +-..-.... ...+.......+.++
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~-------------~~~~~~~s~---~~~sl~~~~~~l~~L 100 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPC-------------PSVFLSASR---RILSLSLASTRLSEL 100 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcc-------------ccccccccc---ccchhhHHHHHHHHH
Confidence 3337777778888743444455566677799999999888 433211111 111333445666677
Q ss_pred HHHhC--CccEEEEEeChhHHHHHHHH---Hh-C-C---cccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHH
Q psy4974 172 LKLLG--VCKVSLFGWCDGGHLSFVFS---MK-Y-P---HMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVL 241 (345)
Q Consensus 172 l~~~~--~~~i~lvGhS~Gg~ia~~~a---~~-~-p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
+.... ..+++.--+|+||...+... .. + | +...++++.+.+............ ..............
T Consensus 101 ~~~~~~~~~pi~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~---~~~~~~~~~~~~~~ 177 (350)
T KOG2521|consen 101 LSDYNSDPCPIIFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAV---SFSSPPDDYVARWA 177 (350)
T ss_pred hhhccCCcCceEEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhccee---ccccCchhhHHHHH
Confidence 76665 44778889999997655433 11 2 2 345566666654432111100000 00000000000000
Q ss_pred H-HcccCCc-hhhhh-HHHHHHHHHH---HHHhhCc-hhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----C
Q psy4974 242 K-AYDNDVN-YITGI-FNQYVDMVNL---IFKSYGR-NVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----F 310 (345)
Q Consensus 242 ~-~~~~~~~-~~~~~-~~~~~~~~~~---~~~~~~~-~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~ 310 (345)
+ .+..... +.... -......+.. +...... +.+...-.....+.+.+.+..|.++|....+++.+... +
T Consensus 178 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~ 257 (350)
T KOG2521|consen 178 RLNYHITLLTMAGNEGGAYLLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVN 257 (350)
T ss_pred hcCeEEEEEEeeecccchhhhhhhhhccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCce
Confidence 0 0000000 00000 0000000000 0000000 00111122235578899999999999988888754432 3
Q ss_pred cEEEEeCCCCCcccc-cChHHHHHHHHHHHHhh
Q psy4974 311 CQYYQFSSGGHSCHI-KHGQVFNEISRNFILEE 342 (345)
Q Consensus 311 ~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 342 (345)
++.+-+.++-|..+. ..|..+.+...+|++..
T Consensus 258 v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 258 VKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred EEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 455667789998877 57999999999999754
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.015 Score=42.69 Aligned_cols=39 Identities=33% Similarity=0.321 Sum_probs=24.7
Q ss_pred eeeEEEcCceEEEEEcCC---CCceEEEEcCcCCCchhhHHHH
Q psy4974 74 EGFFSIKGCDIRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQ 113 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~ 113 (345)
...++++|..||+....+ +..||||+|||+||- ..|..+
T Consensus 70 hf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf-~Ef~~v 111 (112)
T PF06441_consen 70 HFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSF-LEFLKV 111 (112)
T ss_dssp EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--G-GGGHHH
T ss_pred CeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccH-HhHHhh
Confidence 555678999999987643 335999999999994 666554
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.011 Score=49.76 Aligned_cols=28 Identities=25% Similarity=0.352 Sum_probs=21.6
Q ss_pred HHHhCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 172 LKLLGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 172 l~~~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
+++....++++.|||+||.+|..++...
T Consensus 122 ~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 122 LKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 3333445899999999999999888753
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.042 Score=50.35 Aligned_cols=35 Identities=23% Similarity=0.158 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHH
Q psy4974 163 EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~ 197 (345)
+..+.+.+++.+....++++.|||+||.+|..+|.
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 33445555666655568999999999999998765
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.048 Score=42.62 Aligned_cols=37 Identities=16% Similarity=0.179 Sum_probs=33.2
Q ss_pred ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 178 CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 178 ~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
....+-|-||||+.|..+.-++|+...++|.+++...
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 4567889999999999999999999999999998655
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.05 Score=49.98 Aligned_cols=52 Identities=17% Similarity=0.195 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHh----C----CcccceeeEeccCCC
Q psy4974 163 EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMK----Y----PHMVHKLVIWGTKSF 214 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~----~----p~~v~~lvl~~~~~~ 214 (345)
+..+.+.++++.....++++.|||+||.+|..+|.. . ..++.++...+.+-.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 456667777777766689999999999999988752 1 123445566655433
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.12 Score=45.63 Aligned_cols=157 Identities=13% Similarity=0.173 Sum_probs=85.8
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc-CCChhhHHHHHHHcccCC
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS-NWSPMARSEVLKAYDNDV 248 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 248 (345)
..+.++.++.+.+-|-|--|+.++..|...| +|.++|-...-.. ..........+... .|+........+-..+.
T Consensus 226 ~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDp-rv~aIvp~v~D~L--ni~a~L~hiyrsYGgnwpi~l~pyyaegi~er- 301 (507)
T COG4287 226 DELEQVEIKGFMVTGASKRGWTTWLTAIADP-RVFAIVPFVYDNL--NIEAQLLHIYRSYGGNWPIKLAPYYAEGIDER- 301 (507)
T ss_pred hhhhheeeeeEEEeccccchHHHHHHHhcCc-chhhhhhhHHhhc--ccHHHHHHHHHhhCCCCCcccchhHhhhHHHh-
Confidence 4455567788999999999999999888776 5666653222111 00111111111111 22222221111111111
Q ss_pred chhhhhHHHHHHHHHHHHHhhCchhh--hccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCc-EEEEeCCCCCcccc
Q psy4974 249 NYITGIFNQYVDMVNLIFKSYGRNVY--QELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFC-QYYQFSSGGHSCHI 325 (345)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~ 325 (345)
.-...+ .......+...+ .....++..|-.++.|+.|.+.++..+....+.+|+. .+..+|+..|...
T Consensus 302 -l~tp~f-------kqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~- 372 (507)
T COG4287 302 -LETPLF-------KQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI- 372 (507)
T ss_pred -hcCHHH-------HHHHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh-
Confidence 001111 111111111111 1112456789999999999999999999999999975 5667899999876
Q ss_pred cChHHHHHHHHHHHHh
Q psy4974 326 KHGQVFNEISRNFILE 341 (345)
Q Consensus 326 ~~~~~~~~~i~~fl~~ 341 (345)
++.+.+.+..|+++
T Consensus 373 --n~~i~esl~~flnr 386 (507)
T COG4287 373 --NQFIKESLEPFLNR 386 (507)
T ss_pred --HHHHHHHHHHHHHH
Confidence 44555556666543
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.031 Score=50.61 Aligned_cols=34 Identities=21% Similarity=0.183 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHh
Q psy4974 165 VDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 165 ~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~ 198 (345)
...+..+++..... +|++.|||+||.+|+.+|..
T Consensus 213 l~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 213 LAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 44445555555434 49999999999999998854
|
|
| >KOG1516|consensus | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.074 Score=51.15 Aligned_cols=114 Identities=15% Similarity=0.087 Sum_probs=64.2
Q ss_pred CceEEEEcCcCCCc--hhhH--HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEI--RNSF--KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 93 ~p~vv~lHG~~~~~--~~~~--~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.|++|++||++-.. ...+ ......+.....-|+.+.+|= =+-|+.+ .|.+.. ...+ .+.+.....+++
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRL----G~lGF~s--t~d~~~-~gN~-gl~Dq~~AL~wv 183 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRL----GPLGFLS--TGDSAA-PGNL-GLFDQLLALRWV 183 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccc----eeceeee--cCCCCC-CCcc-cHHHHHHHHHHH
Confidence 58999999986431 1222 112223334347788888764 0112210 222222 3444 333333334555
Q ss_pred HHHHHHhCC--ccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 169 YELLKLLGV--CKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 169 ~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
.+-+...|- ++|.|+|||.||..+..+.... ...+.++|..++...
T Consensus 184 ~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 184 KDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred HHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 566666664 4899999999999887766531 245677777776544
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.076 Score=42.53 Aligned_cols=54 Identities=13% Similarity=0.118 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHHHhC-----CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 161 IEEDVDIAYELLKLLG-----VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 161 ~~~~~~~~~~~l~~~~-----~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
-++-+..+..+++.+. ..++.++|||+|+.++-..+...+..+..+|+++++..
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 3445666667766553 23789999999999998888776678999999987654
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.033 Score=50.51 Aligned_cols=37 Identities=11% Similarity=0.154 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHh
Q psy4974 162 EEDVDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~ 198 (345)
++..+++..+++....+ ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 44556666777665433 68999999999999998864
|
|
| >KOG2182|consensus | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.15 Score=46.79 Aligned_cols=83 Identities=24% Similarity=0.231 Sum_probs=63.1
Q ss_pred CCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC----CCCCccchHHHHHHHHHHHHHhCC-------ccEEEEEeC
Q psy4974 118 DPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR----SFVPFQYIEEDVDIAYELLKLLGV-------CKVSLFGWC 186 (345)
Q Consensus 118 ~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~-------~~i~lvGhS 186 (345)
++.|-.|+.+++|- +|.|.+-.. .. ..-+..+...|+.++++++.. .|.+.+|-|
T Consensus 115 kkfgA~v~~lEHRF-------------YG~S~P~~~~st~nl-k~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgS 180 (514)
T KOG2182|consen 115 KKFGATVFQLEHRF-------------YGQSSPIGDLSTSNL-KYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGS 180 (514)
T ss_pred HHhCCeeEEeeeec-------------cccCCCCCCCcccch-hhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCC
Confidence 34478999999999 998854321 11 223456667888888887642 289999999
Q ss_pred hhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 187 DGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 187 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.-|.++..+=.++|+.+.+.|.-+++..
T Consensus 181 YsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 181 YSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred chhHHHHHHHHhCchhheeeccccccee
Confidence 9999999999999999988887776544
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.053 Score=35.22 Aligned_cols=41 Identities=10% Similarity=0.122 Sum_probs=21.4
Q ss_pred CCcceeeeEEE-cCceEEEEEcC--C-------CCceEEEEcCcCCCchhhH
Q psy4974 69 QDVFTEGFFSI-KGCDIRFIKYG--S-------GAQVLFFTYGVLGEIRNSF 110 (345)
Q Consensus 69 ~~~~~~~~~~~-~g~~l~~~~~g--~-------~~p~vv~lHG~~~~~~~~~ 110 (345)
+...+++.+.. ||+-|...... . .+|+|++.||+.+++ ..|
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss-~~w 59 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSS-DDW 59 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--G-GGG
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccCh-HHH
Confidence 34445666666 88887765432 2 347999999999996 777
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.068 Score=43.11 Aligned_cols=48 Identities=15% Similarity=0.132 Sum_probs=34.6
Q ss_pred HHHHHHHHhCCccEEEEEeChhHHHHHHHHHh--C----CcccceeeEeccCCC
Q psy4974 167 IAYELLKLLGVCKVSLFGWCDGGHLSFVFSMK--Y----PHMVHKLVIWGTKSF 214 (345)
Q Consensus 167 ~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~--~----p~~v~~lvl~~~~~~ 214 (345)
.+.+....-.-.+++|+|+|.|+.++..++.. . .++|.++++++-+..
T Consensus 70 ~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 70 LIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 33333344445599999999999999998877 2 357899999887654
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >KOG4372|consensus | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.03 Score=50.02 Aligned_cols=102 Identities=15% Similarity=0.083 Sum_probs=54.7
Q ss_pred cCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCC-CCCCCCCCCc
Q psy4974 80 KGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS-LPKGRSFVPF 158 (345)
Q Consensus 80 ~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s-~~~~~~~~~~ 158 (345)
+..++.+....+++-.+|+.||+.+.....|...+...... +.=..+..+| +-.. ....... ..
T Consensus 67 ~~w~~p~~~~~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g-------------~~~~~~~T~~Gv-~~ 131 (405)
T KOG4372|consen 67 DLWDLPYSFPTKPKHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRG-------------KMNNMCQTFDGV-DV 131 (405)
T ss_pred ccccCCcccccCCceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeec-------------cccchhhccccc-ee
Confidence 44444442222232489999999883247787777766655 2222333344 1111 1001000 00
Q ss_pred cchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHH
Q psy4974 159 QYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 159 ~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~ 197 (345)
-=+..++++.+.+....++++..+|||+||.++..+..
T Consensus 132 -lG~Rla~~~~e~~~~~si~kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 132 -LGERLAEEVKETLYDYSIEKISFVGHSLGGLVARYAIG 169 (405)
T ss_pred -eecccHHHHhhhhhccccceeeeeeeecCCeeeeEEEE
Confidence 01223445555555555789999999999998765443
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.046 Score=48.81 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHh
Q psy4974 164 DVDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 164 ~~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~ 198 (345)
..+.+..+++..+.+ +|++.|||+||.+|..+|..
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 345566666665533 58999999999999988865
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.16 Score=43.74 Aligned_cols=36 Identities=17% Similarity=0.165 Sum_probs=32.6
Q ss_pred cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 179 KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 179 ~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.-+|+|-|+||.+++..+..+|+.+..++..+|...
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 568999999999999999999999999998888655
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.053 Score=50.22 Aligned_cols=36 Identities=25% Similarity=0.208 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHH
Q psy4974 162 EEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~ 197 (345)
.+....+.+++++....++++.|||+||.+|..+|.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 345566667777766669999999999999998874
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.078 Score=43.43 Aligned_cols=39 Identities=10% Similarity=-0.084 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHHHHhCC-ccEEEEEeChhHHHHHHHHHhC
Q psy4974 161 IEEDVDIAYELLKLLGV-CKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 161 ~~~~~~~~~~~l~~~~~-~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
+.+..+....++++.+. ++++|+|||.|+.+...+....
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 44556666677887754 4999999999999999988764
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.16 Score=45.27 Aligned_cols=41 Identities=20% Similarity=0.330 Sum_probs=31.9
Q ss_pred CCccEEEEEeChhHHHHHHHHHhCCc-----ccceeeEeccCCCCC
Q psy4974 176 GVCKVSLFGWCDGGHLSFVFSMKYPH-----MVHKLVIWGTKSFLT 216 (345)
Q Consensus 176 ~~~~i~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~ 216 (345)
+.+|+.|+|||+|+.+...+.....+ .|..+++++.+....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 66699999999999998876655433 389999998776643
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.076 Score=48.15 Aligned_cols=35 Identities=17% Similarity=0.131 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHh
Q psy4974 164 DVDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 164 ~~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~ 198 (345)
..+.+..+++....+ +|++.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 345566677765532 69999999999999988853
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.2 Score=45.45 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhC---C-ccEEEEEeChhHHHHHHHHHh
Q psy4974 162 EEDVDIAYELLKLLG---V-CKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~---~-~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
++..+.+.++++.+. . .++.+.|||+||.+|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344556666666552 1 379999999999999988753
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=94.00 E-value=4 Score=37.93 Aligned_cols=106 Identities=16% Similarity=0.207 Sum_probs=64.1
Q ss_pred EEEEcCCC-CceEEEEcCcCCCchhhHHH--HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccch
Q psy4974 85 RFIKYGSG-AQVLFFTYGVLGEIRNSFKK--QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYI 161 (345)
Q Consensus 85 ~~~~~g~~-~p~vv~lHG~~~~~~~~~~~--~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~ 161 (345)
+|...|+= +|..|.+.|.-.. +.|+. +.+.|..- -.+.-|.|- -|.+--.. .+.+
T Consensus 280 yYFnPGD~KPPL~VYFSGyR~a--EGFEgy~MMk~Lg~P--fLL~~DpRl-------------eGGaFYlG-----s~ey 337 (511)
T TIGR03712 280 YYFNPGDFKPPLNVYFSGYRPA--EGFEGYFMMKRLGAP--FLLIGDPRL-------------EGGAFYLG-----SDEY 337 (511)
T ss_pred EecCCcCCCCCeEEeeccCccc--CcchhHHHHHhcCCC--eEEeecccc-------------ccceeeeC-----cHHH
Confidence 34445553 3567888887653 44433 33444332 344557776 44442111 1123
Q ss_pred HHH-HHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 162 EED-VDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 162 ~~~-~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
++. .+-+.+.++.++.+ .++|-|-|||..-|+.++++.. ..++|+--|...
T Consensus 338 E~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~N 391 (511)
T TIGR03712 338 EQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVN 391 (511)
T ss_pred HHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccc
Confidence 333 45555778888876 7999999999999999998863 456666555443
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.11 Score=48.40 Aligned_cols=37 Identities=19% Similarity=0.259 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhCC-----ccEEEEEeChhHHHHHHHHHh
Q psy4974 162 EEDVDIAYELLKLLGV-----CKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~~-----~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
++..+.+..+++..+. -+|.+.|||+||.+|...|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 3445556666666532 389999999999999998853
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.11 Score=48.16 Aligned_cols=35 Identities=14% Similarity=0.153 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHh
Q psy4974 164 DVDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 164 ~~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~ 198 (345)
..+.+..+++...-+ +|++.|||+||.+|...|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344555666655432 68999999999999988764
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.14 Score=47.63 Aligned_cols=36 Identities=17% Similarity=0.256 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhCC-----ccEEEEEeChhHHHHHHHHHh
Q psy4974 163 EDVDIAYELLKLLGV-----CKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~-----~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
+..+.+..+++.... .+|.+.|||+||.+|...|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344555566665532 279999999999999998753
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.14 Score=47.59 Aligned_cols=36 Identities=14% Similarity=0.303 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhC---C-ccEEEEEeChhHHHHHHHHHh
Q psy4974 163 EDVDIAYELLKLLG---V-CKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 163 ~~~~~~~~~l~~~~---~-~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
+..+++..+++.+. . .++.+.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34556666666553 1 269999999999999988854
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.15 Score=47.46 Aligned_cols=36 Identities=19% Similarity=0.296 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHhC-----C-ccEEEEEeChhHHHHHHHHH
Q psy4974 162 EEDVDIAYELLKLLG-----V-CKVSLFGWCDGGHLSFVFSM 197 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~-----~-~~i~lvGhS~Gg~ia~~~a~ 197 (345)
++..+.+..+++..+ . -+|.+.|||+||.+|...|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 344556666666552 1 27999999999999998875
|
|
| >KOG2029|consensus | Back alignment and domain information |
|---|
Probab=92.71 E-value=0.52 Score=44.39 Aligned_cols=49 Identities=16% Similarity=0.221 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhC---CccEEEEEeChhHHHHHHHHHh-----CCc------ccceeeEeccCC
Q psy4974 165 VDIAYELLKLLG---VCKVSLFGWCDGGHLSFVFSMK-----YPH------MVHKLVIWGTKS 213 (345)
Q Consensus 165 ~~~~~~~l~~~~---~~~i~lvGhS~Gg~ia~~~a~~-----~p~------~v~~lvl~~~~~ 213 (345)
...+.+.+.+.+ -++|+.+||||||.++=.+... .|+ .-+++|+++.+-
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 334444444433 3489999999999887665443 232 356778777653
|
|
| >KOG4569|consensus | Back alignment and domain information |
|---|
Probab=91.87 E-value=0.27 Score=43.97 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHh
Q psy4974 162 EEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
..+.+++..+++...--++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 3455666777777775689999999999999988864
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=91.72 E-value=0.38 Score=38.77 Aligned_cols=61 Identities=15% Similarity=0.100 Sum_probs=45.6
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhh---cCC--cEEEEeCCCCCcccccC---hHHHHHHHHHHHHhh
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQ---LKF--CQYYQFSSGGHSCHIKH---GQVFNEISRNFILEE 342 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~---~~~--~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~~ 342 (345)
++++|-|-|+.|.++...+....... +|. ...++.+++||+....- .+++...|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 46788899999999987655555444 442 36677889999977653 478889999998763
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function | Back alignment and domain information |
|---|
Probab=91.07 E-value=1.8 Score=31.12 Aligned_cols=89 Identities=17% Similarity=0.079 Sum_probs=59.1
Q ss_pred CCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEE
Q psy4974 104 GEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLF 183 (345)
Q Consensus 104 ~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lv 183 (345)
.+++..|..+.+.+..+||..=.+.++. +|.+-... + .....+.-...+..+++.+...+++++
T Consensus 7 ~SPwnly~~l~~Fl~~~~~P~G~~~Lr~-------------~~~~~~~~--~-~~~~~~~K~~~i~~i~~~fP~~kfiLI 70 (100)
T PF09949_consen 7 NSPWNLYPFLRDFLRRNGFPAGPLLLRD-------------YGPSLSGL--F-KSGAEEHKRDNIERILRDFPERKFILI 70 (100)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCceEccc-------------CCcccccc--c-cCCchhHHHHHHHHHHHHCCCCcEEEE
Confidence 3445666777777777777766677776 64442111 0 111112446678888999988899999
Q ss_pred EeChhH--HHHHHHHHhCCcccceeeE
Q psy4974 184 GWCDGG--HLSFVFSMKYPHMVHKLVI 208 (345)
Q Consensus 184 GhS~Gg--~ia~~~a~~~p~~v~~lvl 208 (345)
|-|--. -+-..+|.++|++|.++.+
T Consensus 71 GDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 71 GDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred eeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 998655 3445578889999988765
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.76 E-value=0.44 Score=45.15 Aligned_cols=21 Identities=19% Similarity=0.362 Sum_probs=18.3
Q ss_pred ccEEEEEeChhHHHHHHHHHh
Q psy4974 178 CKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 178 ~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 389999999999999887764
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.40 E-value=2.3 Score=39.57 Aligned_cols=103 Identities=20% Similarity=0.145 Sum_probs=58.4
Q ss_pred CceEEEEcCcCCCchhhHHHHHHh-------------------hCCCCeEEEEeC-CCCchhhhccCCccCCCCCCCC--
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTA-------------------FDPKLFTSIFWD-PPGNVVLYLLGKTCSGYGQSLP-- 150 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~-------------------L~~~G~~vi~~D-~~G~~~~~~~g~~~~~~G~s~~-- 150 (345)
+|.++++.|++|++ ..|-.+.+. +.+. -.++.+| .-| -|.|..
T Consensus 101 rPvi~wlNGGPGcS-S~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvG-------------TGfS~a~~ 165 (498)
T COG2939 101 RPVIFWLNGGPGCS-SVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVG-------------TGFSRALG 165 (498)
T ss_pred CceEEEecCCCChH-hhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcc-------------cCcccccc
Confidence 47999999999996 666554321 0011 3577788 446 666653
Q ss_pred CCCCCCCccchHHHHHHHH----HHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCc---ccceeeEecc
Q psy4974 151 KGRSFVPFQYIEEDVDIAY----ELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPH---MVHKLVIWGT 211 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~----~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~ 211 (345)
.+..- +.....+++..+. +.+.+..- .+.+|+|-|.||.-+..+|...-+ ..++++.+.+
T Consensus 166 ~e~~~-d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlss 234 (498)
T COG2939 166 DEKKK-DFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSS 234 (498)
T ss_pred ccccc-chhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeee
Confidence 22111 2222222232222 22223332 389999999999988888765333 2566666554
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=89.63 E-value=0.75 Score=39.26 Aligned_cols=40 Identities=10% Similarity=0.267 Sum_probs=27.8
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEecc
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGT 211 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 211 (345)
.+.+...-.++.+.|||+||.+|..+..++. +-.+.+-+|
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 4444445558999999999999999888764 333444443
|
|
| >KOG4540|consensus | Back alignment and domain information |
|---|
Probab=89.63 E-value=0.75 Score=39.26 Aligned_cols=40 Identities=10% Similarity=0.267 Sum_probs=27.8
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEecc
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGT 211 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 211 (345)
.+.+...-.++.+.|||+||.+|..+..++. +-.+.+-+|
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 4444445558999999999999999888764 333444443
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=87.91 E-value=3 Score=34.99 Aligned_cols=53 Identities=15% Similarity=0.197 Sum_probs=32.4
Q ss_pred chHHHHHHHHHHHHH-h-CCccEEEEEeChhHHHHHHHHHhCC------cccceeeEeccC
Q psy4974 160 YIEEDVDIAYELLKL-L-GVCKVSLFGWCDGGHLSFVFSMKYP------HMVHKLVIWGTK 212 (345)
Q Consensus 160 ~~~~~~~~~~~~l~~-~-~~~~i~lvGhS~Gg~ia~~~a~~~p------~~v~~lvl~~~~ 212 (345)
+..+-++.+.+.++. . .-++++++|+|+|+.++...+.+.- ...-.+|+++-+
T Consensus 28 Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNP 88 (225)
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCC
Confidence 344444555544444 1 2368999999999999888776531 123356666544
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=84.81 E-value=1.4 Score=41.60 Aligned_cols=60 Identities=10% Similarity=0.145 Sum_probs=45.7
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHhhc----C--------CcEEEEeCCCCCccccc--ChHHHHHHHHHHHHhh
Q psy4974 283 VPVLVFHSADDVMVSTQQVQSLLNQL----K--------FCQYYQFSSGGHSCHIK--HGQVFNEISRNFILEE 342 (345)
Q Consensus 283 ~Pvl~i~G~~D~~v~~~~~~~~~~~~----~--------~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~ 342 (345)
-.+++.||..|.++|+.....+.+++ . -.++..+||.+|+.--. .+-.....|.+|.++-
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 57999999999999987766665544 1 14788999999986443 4556788899998753
|
It also includes several bacterial homologues of unknown function. |
| >COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.59 E-value=22 Score=32.12 Aligned_cols=86 Identities=13% Similarity=0.069 Sum_probs=60.1
Q ss_pred eEEEEcCcCCC------chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 95 VLFFTYGVLGE------IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 95 ~vv~lHG~~~~------~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.||++||-+.+ ....|..+++.+.++| .+-.+|..- .|..+ .+++++..+
T Consensus 173 ~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AY-------------QGF~~----------GleeDa~~l 228 (396)
T COG1448 173 SVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAY-------------QGFAD----------GLEEDAYAL 228 (396)
T ss_pred CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhh-------------hhhcc----------chHHHHHHH
Confidence 69999997655 2588999999998884 445566554 43331 356667767
Q ss_pred HHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccC
Q psy4974 169 YELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTK 212 (345)
Q Consensus 169 ~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 212 (345)
..++.... -.++..|+.=.+++ |.+||-++.+++..
T Consensus 229 R~~a~~~~---~~lva~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 229 RLFAEVGP---ELLVASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred HHHHHhCC---cEEEEehhhhhhhh-----hhhccceeEEEeCC
Confidence 76666533 38888888777665 56889999988663
|
|
| >KOG1283|consensus | Back alignment and domain information |
|---|
Probab=82.38 E-value=5.9 Score=34.74 Aligned_cols=107 Identities=18% Similarity=0.142 Sum_probs=68.4
Q ss_pred CCceEEEEcCcCCCchhh---HHHHHH-----------hhCCCCeEEEEeCCC-CchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 92 GAQVLFFTYGVLGEIRNS---FKKQLT-----------AFDPKLFTSIFWDPP-GNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~---~~~~~~-----------~L~~~G~~vi~~D~~-G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
.+|..+.+.|.++.+... |+++-+ .|.. ..++.+|-| | -|.|-.....+
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVG-------------aGfSyVdg~~~- 93 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVG-------------AGFSYVDGSSA- 93 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCc-------------CceeeecCccc-
Confidence 346788898888764222 333221 1222 467888866 5 66664443333
Q ss_pred CccchHHHHHHHHHHHHHh-------CCccEEEEEeChhHHHHHHHHHhCCc---------ccceeeEeccCCC
Q psy4974 157 PFQYIEEDVDIAYELLKLL-------GVCKVSLFGWCDGGHLSFVFSMKYPH---------MVHKLVIWGTKSF 214 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~-------~~~~i~lvGhS~Gg~ia~~~a~~~p~---------~v~~lvl~~~~~~ 214 (345)
...+..+.+.|+.++++.+ ...|++|+.-|.||-+|..++...-+ .+.+++|-++...
T Consensus 94 Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 94 YTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred ccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 3345677889999998875 23489999999999999888765322 3456676666544
|
|
| >KOG4388|consensus | Back alignment and domain information |
|---|
Probab=80.36 E-value=12 Score=35.60 Aligned_cols=100 Identities=19% Similarity=0.143 Sum_probs=54.1
Q ss_pred eEEEEcCcCCCc--hhhHHHHHHhhC-CCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEI--RNSFKKQLTAFD-PKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 95 ~vv~lHG~~~~~--~~~~~~~~~~L~-~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
.|+-+||+|--. ...-+..++.++ ..|+.|+.+|+-- .|..+| +- ..++..-..-.+
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSL------------------APEaPF-PR-aleEv~fAYcW~ 457 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSL------------------APEAPF-PR-ALEEVFFAYCWA 457 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeecc------------------CCCCCC-Cc-HHHHHHHHHHHH
Confidence 578889987431 022222222222 2369999999744 233333 22 122222111222
Q ss_pred H---HHhCC--ccEEEEEeChhHHHHHHHHHh----CCcccceeeEeccCCC
Q psy4974 172 L---KLLGV--CKVSLFGWCDGGHLSFVFSMK----YPHMVHKLVIWGTKSF 214 (345)
Q Consensus 172 l---~~~~~--~~i~lvGhS~Gg~ia~~~a~~----~p~~v~~lvl~~~~~~ 214 (345)
+ ..+|. ++|+++|-|.||.+.+-.|.+ .-...+++++.-++.-
T Consensus 458 inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl 509 (880)
T KOG4388|consen 458 INNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTL 509 (880)
T ss_pred hcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhh
Confidence 2 33443 599999999999875554443 3334578888776543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 345 | ||||
| 2ocl_A | 254 | Crystal Structure Of Valacyclovir Hydrolase S122a M | 6e-36 | ||
| 2ocg_A | 254 | Crystal Structure Of Human Valacyclovir Hydrolase L | 8e-36 | ||
| 2ock_A | 254 | Crystal Structure Of Valacyclovir Hydrolase D123n M | 3e-35 | ||
| 1u2e_A | 289 | Crystal Structure Of The C-C Bond Hydrolase Mhpc Le | 8e-05 |
| >pdb|2OCL|A Chain A, Crystal Structure Of Valacyclovir Hydrolase S122a Mutant Length = 254 | Back alignment and structure |
|
| >pdb|2OCG|A Chain A, Crystal Structure Of Human Valacyclovir Hydrolase Length = 254 | Back alignment and structure |
|
| >pdb|2OCK|A Chain A, Crystal Structure Of Valacyclovir Hydrolase D123n Mutant Length = 254 | Back alignment and structure |
|
| >pdb|1U2E|A Chain A, Crystal Structure Of The C-C Bond Hydrolase Mhpc Length = 289 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 345 | |||
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 1e-46 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 4e-18 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 7e-17 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 9e-17 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 1e-15 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 3e-14 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 7e-14 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 8e-14 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 1e-13 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 3e-13 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 4e-13 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 2e-12 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 9e-12 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 2e-11 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 2e-11 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 2e-11 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 3e-11 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 6e-11 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 8e-11 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 2e-10 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 5e-10 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 1e-09 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 6e-09 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 5e-08 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 5e-08 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 6e-08 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 7e-08 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 9e-08 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 1e-07 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 3e-07 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 3e-07 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 8e-07 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 2e-06 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 2e-06 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 3e-06 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 4e-06 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 4e-06 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 4e-06 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 5e-06 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 6e-06 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 6e-06 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 9e-06 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 1e-05 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 1e-05 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 3e-05 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 4e-05 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 6e-05 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 8e-05 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 8e-05 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 9e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 1e-04 | |
| 3rix_A | 550 | Luciferase, luciferin 4-monooxygenase; oxidoreduct | 2e-04 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 3e-04 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 5e-04 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 5e-04 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 6e-04 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 7e-04 |
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 1e-46
Identities = 79/267 (29%), Positives = 125/267 (46%), Gaps = 16/267 (5%)
Query: 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
T ++ G + + + G G + G+LG F QL + KLFT + WDP G
Sbjct: 3 TSAKVAVNGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRG- 61
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLS 192
YG S P R F P + E D A +L+K L KVSL GW DGG +
Sbjct: 62 ------------YGHSRPPDRDF-PADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITA 108
Query: 193 FVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYIT 252
+ + KYP +HK+VIWG +++T ++ ++EG+R +S WS R + Y D Y
Sbjct: 109 LIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYD--YFA 166
Query: 253 GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQ 312
++VD + N+ + LLP V P L+ H D +V + +K +
Sbjct: 167 RTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSR 226
Query: 313 YYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ G H+ H++ FN+++ +F+
Sbjct: 227 LHLMPEGKHNLHLRFADEFNKLAEDFL 253
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 4e-18
Identities = 32/200 (16%), Positives = 66/200 (33%), Gaps = 14/200 (7%)
Query: 144 GYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMV 203
G+G + P + + DV YE LK G K+++ G GG S P +
Sbjct: 53 GHGVPPEELVHTGPDDWWQ-DVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--I 109
Query: 204 HKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVN 263
+V ++ + + + + + +
Sbjct: 110 EGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQE 169
Query: 264 LIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK--FCQYYQFSSGGH 321
LI +V ++ L + P V + D M++ + N+++ Q + GH
Sbjct: 170 LI-----ADV-RDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGH 223
Query: 322 SCHI--KHGQVFNEISRNFI 339
+ + Q+ +I F+
Sbjct: 224 VITLDQEKDQLHEDI-YAFL 242
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 7e-17
Identities = 36/266 (13%), Positives = 91/266 (34%), Gaps = 29/266 (10%)
Query: 81 GCDIRFIKYGSGA--QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLL 138
+ ++ G+ L F +G F + + + I D G
Sbjct: 2 NAMLHYVHVGNKKSPNTLLFVHGSGCN-LKIFGELEKYL--EDYNCILLDLKG------- 51
Query: 139 GKTCSGYGQS-LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSM 197
+G+S + + YI+ + ++L G+ GG + ++
Sbjct: 52 ------HGESKGQCPSTV--YGYIDNVANFITNSEVTKHQKNITLIGYSMGGAIVLGVAL 103
Query: 198 KYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQ 257
K V K+V + + E + + + + +L+ N ++ + +
Sbjct: 104 KKLPNVRKVVSLSGGARFDKLDKDFMEKIYH----NQLDNNYLLECIGGIDNPLSEKYFE 159
Query: 258 YVDMVNLI----FKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQY 313
++ I + + L +D+PV + D+++ + + + +++ +
Sbjct: 160 TLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVENSEL 219
Query: 314 YQFSSGGHSCHIKHGQVFNEISRNFI 339
F +G H + + + E +NFI
Sbjct: 220 KIFETGKHFLLVVNAKGVAEEIKNFI 245
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 9e-17
Identities = 55/289 (19%), Positives = 104/289 (35%), Gaps = 46/289 (15%)
Query: 72 FTEGFFSIKGCDIRFIKYGSGAQVLF---FTYGVLGEIRNSFKKQLTAFDPKLFTSIFWD 128
+ E F + G + R+++ G G V+ G E +++ + + I D
Sbjct: 16 YVERFVNAGGVETRYLEAGKGQPVILIHGGGAGAESE--GNWRNVIPILARH-YRVIAMD 72
Query: 129 PPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY-IEEDVDIAYELLKLLGV-CKVSLFGWC 186
G +G++ + +Y + + ++ +K + KVS+ G
Sbjct: 73 MLG-------------FGKT-----AKPDIEYTQDRRIRHLHDFIKAMNFDGKVSIVGNS 114
Query: 187 DGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS--EVLKAY 244
GG S+ + +V+ LV+ G+ + + E +R + N+ ++KA
Sbjct: 115 MGGATGLGVSVLHSELVNALVLMGSAGLVV----EIHEDLRPIINYDFTREGMVHLVKAL 170
Query: 245 DNDVNYIT--------------GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHS 290
ND I YV + I + G E + V VP LV
Sbjct: 171 TNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQG 230
Query: 291 ADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
DD +V + L+ + Y GH I+H + F + +F+
Sbjct: 231 KDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLSFL 279
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 1e-15
Identities = 44/298 (14%), Positives = 88/298 (29%), Gaps = 54/298 (18%)
Query: 72 FTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPG 131
+T + G G L T+ E ++ F ++ + G
Sbjct: 3 WTTNIIKTPRGKFEYFLKGEG-PPLCVTHL-YSEYNDNGNTFANPF-TDHYSVYLVNLKG 59
Query: 132 NVVLYLLGKTCSGYGQS-LPKGRSFVPFQY-IEEDVDIAYELLKLLGVCKVSLFGWCDGG 189
G S K S +Y + E + + + L + K G GG
Sbjct: 60 -------------CGNSDSAKNDS----EYSMTETIKDLEAIREALYINKWGFAGHSAGG 102
Query: 190 HLSFVFSMKYPHMVHKLVIWGTKSF---------------------------LTIDNVRV 222
L+ V++ + + K+++ G + L D+
Sbjct: 103 MLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQ 162
Query: 223 FEGMRRLSNWSPM--ARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPY 280
E W+ M E L+ N + N+ + +K Y ++ L +
Sbjct: 163 EERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYD---VRQKLKF 219
Query: 281 VDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNF 338
V +P ++ DV + N + +F H+ ++ FN+ +
Sbjct: 220 VKIPSFIYCGKHDVQCPYIFSCEIANLIPNATLTKFEESNHNPFVEEIDKFNQFVNDT 277
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 3e-14
Identities = 34/277 (12%), Positives = 81/277 (29%), Gaps = 35/277 (12%)
Query: 79 IKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAF-DPKLFTSIFWDPPGNVVLYL 137
+ +I + GSG + F +G+ + ++ + + I+ D PG
Sbjct: 8 LTRSNISYFSIGSG-TPIIFLHGLSLDKQS-TCLFFEPLSNVGQYQRIYLDLPG------ 59
Query: 138 LGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSM 197
G S P P + + +++G + L+G GG+L+ +
Sbjct: 60 -------MGNSDPIS----PSTSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAF 108
Query: 198 KYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSN--WSPMARSEVLKAYDNDVNYITGIF 255
+ + + + L + +V +
Sbjct: 109 HLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQAW 168
Query: 256 NQYVDMVNLIFKSYGRNVYQELLPYV-------------DVPVLVFHSADDVMVSTQQVQ 302
+ Y +++ + + +L P + +D +V Q+
Sbjct: 169 HDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQL 228
Query: 303 SLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
L+N + + + GH+ I + F+
Sbjct: 229 KLINHNENGEIVLLNRTGHNLMIDQREAVGFHFDLFL 265
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 7e-14
Identities = 58/281 (20%), Positives = 103/281 (36%), Gaps = 38/281 (13%)
Query: 80 KGCDIRFIKYGSGAQVLFFTYGVLGEIRN--SFKKQLTAFDPKLFTSIFWDPPGNVVLYL 137
K I F G G + + +G +F + + + I D PG
Sbjct: 23 KTLRIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPG------ 76
Query: 138 LGKTCSGYGQSLPKGRSFVPFQY-IEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFS 196
+G+S V + + I ++ L + K+ L G GGH S F+
Sbjct: 77 -------WGKSDS----VVNSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFT 125
Query: 197 MKYPHMVHKLVIWGTKSF-LTIDNVRVFEGMRRLSNWSPMARSEVLKAYDN----DVNYI 251
+K+P V KLV+ G + +++ EG++RL+ E LK + D + +
Sbjct: 126 LKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDL 185
Query: 252 TG-IFNQYVDMVNL-------IFKSYGRNV-----YQELLPYVDVPVLVFHSADDVMVST 298
T +F ++ + KS N + L + L+ +D V
Sbjct: 186 TDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPM 245
Query: 299 QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
LL+ + + + F GH +H FN++ NF+
Sbjct: 246 DAGLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVLNFL 286
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 8e-14
Identities = 40/204 (19%), Positives = 70/204 (34%), Gaps = 14/204 (6%)
Query: 152 GRSF--VPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIW 209
G S Y D+ + L L + K + G GG + P + KLV
Sbjct: 54 GLSPREPVMNYPAMAQDLV-DTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAI 112
Query: 210 GT--KSFLTIDNVRVFEGMRRLSNWSPMARSEV---LKAYDNDVNYITGIFNQYVDM--- 261
+ + +F + +S R + ++ + N+ I + +VD
Sbjct: 113 DIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWR 172
Query: 262 --VNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSG 319
V +++ Y V E +P D P L + VS Q LL Q + + +
Sbjct: 173 FNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGA 232
Query: 320 GHSCHIKHGQVFNEISRNFILEEN 343
GH H + R + L ++
Sbjct: 233 GHWVHAEKPDAVLRAIRRY-LNDH 255
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 1e-13
Identities = 49/291 (16%), Positives = 95/291 (32%), Gaps = 52/291 (17%)
Query: 76 FFSIKGCDIRFIKYGSGAQVLF---FTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
G + G G V+ GV +++ + A + I D G
Sbjct: 9 SILAAGVLTNYHDVGEGQPVILIHGSGPGVSAYA--NWRLTIPALSKF-YRVIAPDMVG- 64
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQY-IEEDVDIAYELLKLLGVCKVSLFGWCDGGHL 191
+G + + Y + VD ++ L + K + G GG L
Sbjct: 65 ------------FGFTDRP----ENYNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGL 108
Query: 192 SFVFSMKYPHMVHKLVI---WGTKSFLTIDNVRVFEGMRRLSNWSPMARS--EVLKAYDN 246
+ +++Y V ++V+ GT+ +T EG+ + ++P + +L +
Sbjct: 109 AIATALRYSERVDRMVLMGAAGTRFDVT-------EGLNAVWGYTPSIENMRNLLDIFAY 161
Query: 247 DVNYIT--------------GIFNQYVDMVNLIFKSYGRNV--YQELLPYVDVPVLVFHS 290
D + +T G + M + + + E + + L+ H
Sbjct: 162 DRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHG 221
Query: 291 ADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341
+D +V L + Q + F GH I+ FN + F E
Sbjct: 222 REDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 272
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 3e-13
Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 19/212 (8%)
Query: 132 NVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHL 191
V L L G+G + F V+ Y LK + + G GG L
Sbjct: 69 TVCLPRL----KGHGTH-YEDMERTTFHDWVASVEEGYGWLKQRC-QTIFVTGLSMGGTL 122
Query: 192 SFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYI 251
+ + +P + + I + G L + S++ ++ Y
Sbjct: 123 TLYLAEHHPDICGIVPINA--AVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYE 180
Query: 252 TGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL--K 309
+ + L+ + L + P L+F S +D +V + +
Sbjct: 181 KTPTASLLQLARLM-----AQT-KAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISST 234
Query: 310 FCQYYQFSSGGH--SCHIKHGQVFNEISRNFI 339
+ + + H + + F
Sbjct: 235 EKEIVRLRNSYHVATLDYDQPMIIERSLE-FF 265
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 4e-13
Identities = 52/277 (18%), Positives = 91/277 (32%), Gaps = 40/277 (14%)
Query: 89 YGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS 148
G G + + +G G +N ++ L K FT I +D G GQS
Sbjct: 24 TGGGEKTVLLAHG-FGCDQNMWRFMLPEL-EKQFTVIVFDYVG-------------SGQS 68
Query: 149 LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVI 208
+ S + +E E+L L + VS+ G ++ + S + + +
Sbjct: 69 DLESFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITM 128
Query: 209 WGT---KSFLTIDNV-----RVFEGMRRL--SNWSPMARSEVLKAYDND-----VNYITG 253
D V E + L N+ A + ++G
Sbjct: 129 ICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASHSSELIGELSG 188
Query: 254 IFNQ-----YVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL 308
F F S Y+ LL + P L+F SA D + S + Q + +
Sbjct: 189 SFCTTDPIVAKTFAKATFFS----DYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENI 244
Query: 309 KFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENKT 345
Q + GH H+ + + +F ++ N+T
Sbjct: 245 PNSQLELIQAEGHCLHMTDAGLITPLLIHF-IQNNQT 280
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 2e-12
Identities = 46/219 (21%), Positives = 83/219 (37%), Gaps = 29/219 (13%)
Query: 144 GYGQSLPKGRSFVPFQYIEED-VDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHM 202
GYG S + L LG+ +V L G GG + F++ YP
Sbjct: 75 GYGHSDKR----AEHGQFNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPAR 130
Query: 203 VHKLVIWGTKSF-LTIDNVRVFEGMRRLSNWSPMARSEVLKA------YDNDVNYITG-I 254
+LV+ G + + EG++RLS +S E L+A YD ++ IT +
Sbjct: 131 AGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNL--ITPEL 188
Query: 255 FNQYVDMVNL---------IFKSYGRNVYQ-----ELLPYVDVPVLVFHSADDVMVSTQQ 300
+Q + + + KS+ ++ + + PVL+ +D +
Sbjct: 189 VDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDG 248
Query: 301 VQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
L + Q + F GH ++ FN+++ F+
Sbjct: 249 ALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTIEFL 287
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 63.8 bits (155), Expect = 9e-12
Identities = 27/273 (9%), Positives = 61/273 (22%), Gaps = 39/273 (14%)
Query: 86 FIKYGSGAQVLFFTYGV-LGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSG 144
+ + G F G ++F + + D P
Sbjct: 34 YTCHREGNPCFVFLSGAGFFSTADNFANIIDKLPDS-IGILTIDAPN------------- 79
Query: 145 YGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVH 204
G S ++ V + + + + L GG + +
Sbjct: 80 SGYSPVSNQANVGLRDWVNAI---LMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACL 136
Query: 205 KLVIWGTKSFLTIDN--------------VRVFEGMRRLSNWSPMAR----SEVLKAYDN 246
+ + + ++ RL+ ++R S+ K
Sbjct: 137 GFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWR 196
Query: 247 DVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLN 306
+Y N + + + + +P +VF + LN
Sbjct: 197 GYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISEKIPSIVFSESFR--EKEYLESEYLN 254
Query: 307 QLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ + H H E +
Sbjct: 255 KHTQTKLILC-GQHHYLHWSETNSILEKVEQLL 286
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 2e-11
Identities = 40/278 (14%), Positives = 89/278 (32%), Gaps = 45/278 (16%)
Query: 90 GSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS- 148
QVL F +G L + ++ + F + I D PG +G+
Sbjct: 13 VETNQVLVFLHGFLSD-SRTYHNHIEKFTDN-YHVITIDLPG-------------HGEDQ 57
Query: 149 LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVI 208
++ + + +L ++LFG+ GG ++ +++ + L++
Sbjct: 58 SSMDETW----NFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLIL 113
Query: 209 WGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKS 268
T + + E + + ++ + ND +F +++ I
Sbjct: 114 ESTSPGIK-EEANQLERRLVDDARAKVLDIAGIELFVNDW-EKLPLFQSQLELPVEIQHQ 171
Query: 269 YGRNVYQ----------------------ELLPYVDVPVLVFHSADDVMVSTQQVQSLLN 306
+ L + VP L+ D Q + + N
Sbjct: 172 IRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKF-VQIAKKMAN 230
Query: 307 QLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344
+ + S+ GH+ H++ F+ + F+ EE
Sbjct: 231 LIPNSKCKLISATGHTIHVEDSDEFDTMILGFLKEEQN 268
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 2e-11
Identities = 45/285 (15%), Positives = 86/285 (30%), Gaps = 39/285 (13%)
Query: 75 GFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVV 134
G + GSG + F G G ++ + AF+ I +D G
Sbjct: 2 GHMTSILSRNHVKVKGSGKASIMFAPG-FGCDQSVWNAVAPAFEED-HRVILFDYVG--- 56
Query: 135 LYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFV 194
G S + +Q ++ ++ + L + + G G + +
Sbjct: 57 ----------SGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGML 106
Query: 195 FSMKYPHMVHKLVIWGT---KSFLTIDNVR-----VFEGMRRL--SNWSPMARSEVLKAY 244
S++ P + LV+ G + G+ + N+ A
Sbjct: 107 ASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVL 166
Query: 245 DND-----VNYITGIFNQ-----YVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDV 294
+ + F F S R E L V VP L+ ADD+
Sbjct: 167 NQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHR----EDLSKVTVPSLILQCADDI 222
Query: 295 MVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ + + L + Q + GH H+ H ++ +++
Sbjct: 223 IAPATVGKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLIGDYL 267
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-11
Identities = 36/220 (16%), Positives = 66/220 (30%), Gaps = 25/220 (11%)
Query: 144 GYGQS-LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFG--WCDGGHLSFVFSMKYP 200
G+GQS P+ ++ V+ L+ G+ K + G GG ++ ++ P
Sbjct: 68 GFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSM--GGAVTLQLVVEAP 125
Query: 201 HMVHKLVIWGT------------KSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDV 248
K+ + G+ L R L + + E + V
Sbjct: 126 ERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSF-VYDPENFPGMEEIV 184
Query: 249 NYITGIFNQ--YVDMVNLIFKSYGRNV-----YQELLPYVDVPVLVFHSADDVMVSTQQV 301
+ N + ++F+S + L + VLVFH D +V
Sbjct: 185 KSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTS 244
Query: 302 QSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341
L LK + GH ++ +
Sbjct: 245 LYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 3e-11
Identities = 50/311 (16%), Positives = 98/311 (31%), Gaps = 50/311 (16%)
Query: 54 TLLDTQLPSRTDFIHQDVFTEGFFSIKGCDIRFIKYGSGAQVLF---FTYGVLGEIRNSF 110
T L S+ F+ +I + + G+G V+ G G +++
Sbjct: 2 TALTESSTSK--FV-----KINEKGFSDFNIHYNEAGNGETVIMLHGGGPGAGGW--SNY 52
Query: 111 KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170
+ + F + I D PG + +S + Q +
Sbjct: 53 YRNVGPFVDAGYRVILKDSPG-------------FNKS---DAVVMDEQRGLVNARAVKG 96
Query: 171 LLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL-TIDNVRVFEGMRRL 229
L+ L + + L G GG + F+++YP + KL++ G ++ EG++ L
Sbjct: 97 LMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLL 156
Query: 230 SNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRN----------------- 272
E LK Y + + +++ +++ R
Sbjct: 157 FKLYAEPSYETLKQMLQVFLYDQSLITE--ELLQGRWEAIQRQPEHLKNFLISAQKAPLS 214
Query: 273 --VYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQV 330
L + + DD V LL + + + FS G +H
Sbjct: 215 TWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGAWAQWEHADE 274
Query: 331 FNEISRNFILE 341
FN + +F+
Sbjct: 275 FNRLVIDFLRH 285
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 61.1 bits (148), Expect = 6e-11
Identities = 26/202 (12%), Positives = 49/202 (24%), Gaps = 21/202 (10%)
Query: 144 GYGQSLP-KGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHM 202
G+G P + + A + KV +FG GG + P +
Sbjct: 59 GHGTVEPLDILTKGNPDIWWAESSAAVAHMTAKYA-KVFVFGLSLGGIFAMKALETLPGI 117
Query: 203 VHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMV 262
V V F N E + + I +
Sbjct: 118 TAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQLAAIDQFATTV- 176
Query: 263 NLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL---KFCQYYQFSSG 319
L V P + + D +V + L + L ++ +
Sbjct: 177 ------------AADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDA 224
Query: 320 GHSCHIKHG--QVFNEISRNFI 339
H + + ++ F+
Sbjct: 225 KHVITVNSAHHALEEDVIA-FM 245
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 8e-11
Identities = 47/293 (16%), Positives = 99/293 (33%), Gaps = 45/293 (15%)
Query: 72 FTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPG 131
T G + +I + +G+G + + +G S++ Q+ A + I +D G
Sbjct: 7 ITVGTENQAPIEIYYEDHGTG-KPVVLIHG-WPLSGRSWEYQVPALVEAGYRVITYDRRG 64
Query: 132 NVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHL 191
+G+S + + D+ +LL+ L + V+L G+ GG
Sbjct: 65 -------------FGKSSQPWEGYEYDTFTS---DLH-QLLEQLELQNVTLVGFSMGGGE 107
Query: 192 SF-VFSMKYPHMVHKLVIWGT--KSFLTIDN-------VRVFEGMRR--LSNWSPMARSE 239
S + K+V G ++ E + +++ E
Sbjct: 108 VARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLD-E 166
Query: 240 VLK---AYDNDVNYITGIFNQYVDMVNL---------IFKSYGRNVYQELLPYVDVPVLV 287
K A + + ++ F Y + ++ + +++ L ++P L+
Sbjct: 167 FTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLI 226
Query: 288 FHSADDVMVSTQQVQSLLNQL-KFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
H D V + L ++ + G H + H + FNE F+
Sbjct: 227 IHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEALLLFL 279
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 2e-10
Identities = 45/281 (16%), Positives = 89/281 (31%), Gaps = 42/281 (14%)
Query: 79 IKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLL 138
+ ++ + G+G V+F G G R Q+ AF + I +D G
Sbjct: 30 FRVINLAYDDNGTGDPVVFIA-GRGGAGRTWHPHQVPAFLAAGYRCITFDNRG------- 81
Query: 139 GKTCSGYGQS-LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSM 197
G + +G + + V L++ L + + G G ++ +
Sbjct: 82 ------IGATENAEGFT------TQTMVADTAALIETLDIAPARVVGVSMGAFIAQELMV 129
Query: 198 KYPHMVHKLVIWGTKSFLT--------IDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVN 249
P +V V+ T+ L + G++ + AR+ +L+ +
Sbjct: 130 VAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPP--TYDARARLLENFSRKTL 187
Query: 250 YITGIFNQYVDMVNLI----FKSYGRNV-------YQELLPYVDVPVLVFHSADDVMVST 298
++ M ++ + + PVLV ADDV+
Sbjct: 188 NDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPP 247
Query: 299 QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ + + L +Y Q GH + + N F
Sbjct: 248 YLGREVADALPNGRYLQIPDAGHLGFFERPEAVNTAMLKFF 288
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 5e-10
Identities = 40/284 (14%), Positives = 78/284 (27%), Gaps = 40/284 (14%)
Query: 72 FTEGFFSIKGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPP 130
+ S + I G A L +G L + + + K + + D
Sbjct: 45 CKSFYISTRFGQTHVIASGPEDAPPLVLLHGALFSSTM-WYPNIADWSSK-YRTYAVDII 102
Query: 131 GNVVLYLLGKTCSGYGQS-LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGG 189
G +P+ + + ++ LG+ K + G GG
Sbjct: 103 G-------------DKNKSIPEN----VSGTRTDYANWLLDVFDNLGIEKSHMIGLSLGG 145
Query: 190 HLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVF---------EGMRRLSNW----SPMA 236
+ F ++ P V I + + G+ NW +
Sbjct: 146 LHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETFLNWMMNDQNVL 205
Query: 237 RSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMV 296
+K + V + G N N + E L VP+L+ +V+
Sbjct: 206 HPIFVKQFKAGVMWQDGSRN-----PNPNADGFPYVFTDEELRSARVPILLLLGEHEVIY 260
Query: 297 S-TQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ + + + + GH ++ NE F
Sbjct: 261 DPHSALHRASSFVPDIEAEVIKNAGHVLSMEQPTYVNERVMRFF 304
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 1e-09
Identities = 56/288 (19%), Positives = 98/288 (34%), Gaps = 43/288 (14%)
Query: 76 FFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVL 135
F + G I + +GSG Q + F++G +S++ Q+ + + I D G
Sbjct: 3 FTTRDGTQIYYKDWGSG-QPIVFSHG-WPLNADSWESQMIFLAAQGYRVIAHDRRG---- 56
Query: 136 YLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVF 195
+G+S + S +D+ +L++ L + LFG+ GG +
Sbjct: 57 ---------HGRS-SQPWSGNDMDTYADDLA---QLIEHLDLRDAVLFGFSTGGGEVARY 103
Query: 196 SMKY-PHMVHKLVIWGTKSFLTID--------NVRVFEGMRR--LSNWSPMARSEVLKAY 244
++ V K + L + + VF+G+R+ L++ S + + +
Sbjct: 104 IGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPF 163
Query: 245 DNDVNYITGIFNQYVD-MVNLIFKSYGRNVYQ-----------ELLPYVDVPVLVFHSAD 292
VD + +N Y E L +DVP LV H
Sbjct: 164 FGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDA 223
Query: 293 DVMVSTQQVQSLLNQL-KFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
D +V + L K +S H H N FI
Sbjct: 224 DQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFI 271
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 6e-09
Identities = 48/284 (16%), Positives = 92/284 (32%), Gaps = 44/284 (15%)
Query: 81 GCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGK 140
G +I + +G G + + F +G ++++ QL A + I D G
Sbjct: 8 GVEIFYKDWGQG-RPVVFIHG-WPLNGDAWQDQLKAVVDAGYRGIAHDRRG--------- 56
Query: 141 TCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSF-VFSMKY 199
+G S P + + + D+ +LL L + V+L GG
Sbjct: 57 ----HGHSTPVWDGYDFDTFAD---DLN-DLLTDLDLRDVTLVAHSMGGGELARYVGRHG 108
Query: 200 PHMVHKLVIWGT--KSFLTIDN------VRVFEGMRR--LSNWSPMAR--SEVLKAYDND 247
+ V+ + D VF+ ++ L+ S + +E + +
Sbjct: 109 TGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRP 168
Query: 248 VNYITGIFNQYVDMVNL---------IFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST 298
N +T + + ++G + E L D+P LV H DD +V
Sbjct: 169 GNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPI 228
Query: 299 QQVQSLLNQL-KFCQYYQFSSGGHSCHIK--HGQVFNEISRNFI 339
Q+ + + H + + FN F+
Sbjct: 229 DATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFL 272
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 5e-08
Identities = 41/288 (14%), Positives = 84/288 (29%), Gaps = 43/288 (14%)
Query: 74 EGFFSIKGCDIRFIKYG-SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
G+ + ++ G LF +G G ++ L + + F +++D G
Sbjct: 5 IGYVPVGEAELYVEDVGPVEGPALFVLHGGPGGNAYVLREGLQDY-LEGFRVVYFDQRG- 62
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQY-IEEDVDIAYELLKLLGVCKVSLFG--WCDGG 189
G+SL + P + ++ V+ L + LGV + L + G
Sbjct: 63 ------------SGRSLELPQD--PRLFTVDALVEDTLLLAEALGVERFGLLAHGF--GA 106
Query: 190 HLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSN------WSPMARSEVLKA 243
++ ++P +++ +F + + R E
Sbjct: 107 VVALEVLRRFPQAEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEENLKEALKREEPKAL 166
Query: 244 YDNDVN-------------YITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHS 290
+D + GI + + R Y L P+ V
Sbjct: 167 FDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPLYVLVG 226
Query: 291 ADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNF 338
D S + + ++L+ GH I + F E +
Sbjct: 227 ERD-GTSYPYAEEVASRLR-APIRVLPEAGHYLWIDAPEAFEEAFKEA 272
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 5e-08
Identities = 41/234 (17%), Positives = 79/234 (33%), Gaps = 43/234 (18%)
Query: 144 GYGQS-LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHM 202
G+ +S P + Q + LL+ LGV + S+ G GG L+ +++ YP
Sbjct: 83 GFCKSSKPAHYQYSFQQLAA---NTH-ALLERLGVARASVIGHSMGGMLATRYALLYPRQ 138
Query: 203 VHKLVI---WGTKSFLTIDN--VRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQ 257
V +LV+ G + + + V + RR S + +A + F++
Sbjct: 139 VERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPE-FDR 197
Query: 258 YVDMVNLIFKSYGRNVY----------------QELLPYVDVPVLVFHSADDVMVSTQQV 301
+V M +++ GR L + +P L+ D +
Sbjct: 198 WVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDA 257
Query: 302 QSLLNQLKFCQYYQ----------------FSSGGHSCHIKHGQVFNEISRNFI 339
+ + Y Q F GH+ I+ + F++ +
Sbjct: 258 APAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQAPERFHQALLEGL 311
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 6e-08
Identities = 48/317 (15%), Positives = 108/317 (34%), Gaps = 77/317 (24%)
Query: 72 FTEGFFSIKGCDIRFIKYGSGAQ---VLF------FTYGVLGEIRNSFKKQLTAFDPKLF 122
E + + G I + + + ++ ++ + L +
Sbjct: 5 CIENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSH--------DYLLSLRDMTKEGI 56
Query: 123 TSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK-LLGVCKVS 181
T +F+D G G+S +S Y E+ + L L G KV
Sbjct: 57 TVLFYDQFGC-------------GRSEEPDQSKFTIDYGVEEAE---ALRSKLFGNEKVF 100
Query: 182 LFG--WCDGGHLSFVFSMKYPHMVHKLVIWGT--KSFLTIDNV-RVFEGM---------- 226
L G + GG L+ +++KY + L++ G LT+ + R+ + +
Sbjct: 101 LMGSSY--GGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKK 158
Query: 227 --RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQ--------- 275
S +P + V Y ++ + +++ + + RNVY+
Sbjct: 159 YGSSGSYENPEYQEAVNYFYH---QHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFT 215
Query: 276 -----------ELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCH 324
+ + + +P L+ D V+ + + ++ + + F H
Sbjct: 216 ITGTIKDWDITDKISAIKIPTLITVGEYD-EVTPNVARVIHEKIAGSELHVFRDCSHLTM 274
Query: 325 IKHGQVFNEISRNFILE 341
+ + +N++ +FIL+
Sbjct: 275 WEDREGYNKLLSDFILK 291
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 7e-08
Identities = 56/289 (19%), Positives = 106/289 (36%), Gaps = 47/289 (16%)
Query: 76 FFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVL 135
F + G I F +GSG + + F++G L + + ++ Q+ + + +I +D G
Sbjct: 3 FVAKDGTQIYFKDWGSG-KPVLFSHGWLLD-ADMWEYQMEYLSSRGYRTIAFDRRG---- 56
Query: 136 YLLGKTCSGYGQSLPKGRSFVPFQYIEEDV---DIAYELLKLLGVCKVSLFGWCDGGHLS 192
+G+S + + Y D DIA +L++ L + +V+L G+ GG
Sbjct: 57 ---------FGRS---DQPWTGNDY---DTFADDIA-QLIEHLDLKEVTLVGFSMGGGDV 100
Query: 193 F-VFSMKYPHMVHKLVIWGTKSFL---TIDN-----VRVFEGMRR--LSNWSPMARSEVL 241
+ V LV+ G + L D + VF + L + +
Sbjct: 101 ARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNA 160
Query: 242 KAY-DNDVNYITGIFNQYVDMVNL---------IFKSYGRNVYQELLPYVDVPVLVFHSA 291
Y N ++ + L ++ ++ + +DVP LV H
Sbjct: 161 PFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGD 220
Query: 292 DDVMVSTQQVQSLLNQL-KFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
D +V + + +L K + + H + H Q NE F+
Sbjct: 221 GDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFL 269
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 9e-08
Identities = 44/279 (15%), Positives = 78/279 (27%), Gaps = 50/279 (17%)
Query: 83 DIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTC 142
+I + G G L +G G ++ FT D PG
Sbjct: 3 NIWWQTKGQGNVHLVLLHG-WGLNAEVWRCIDEELSSH-FTLHLVDLPG----------- 49
Query: 143 SGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHM 202
+G+S + + + + K GW GG ++ ++ +P
Sbjct: 50 --FGRSRG-----FGALSLADMAE----AVLQQAPDKAIWLGWSLGGLVASQIALTHPER 98
Query: 203 VHKLVIWGT---------------------KSFLTIDNVRVFEGMRRLSNWSPMARSEVL 241
V LV + + L+ D R E L +
Sbjct: 99 VRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDA 158
Query: 242 KAYDNDVNYITGIFNQ-YVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ 300
+A V + + ++ R + L V +P L + D +V +
Sbjct: 159 RALKKTVLALPMPEVDVLNGGLEILKTVDLR----QPLQNVSMPFLRLYGYLDGLVPRKV 214
Query: 301 VQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
V L + Y F+ H+ I H F +
Sbjct: 215 VPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALK 253
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 1e-07
Identities = 50/291 (17%), Positives = 85/291 (29%), Gaps = 45/291 (15%)
Query: 70 DVFTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDP 129
D F I + + GSG ++ F +G + F+ + + FT+I D
Sbjct: 46 DHFISRRVDIGRITLNVREKGSG-PLMLFFHG-ITSNSAVFEPLMIRLSDR-FTTIAVDQ 102
Query: 130 PGNVVLYLLGKTCSGYGQSLPKGRS-FVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDG 188
G +G S K + + Y + DIA L++ L L G G
Sbjct: 103 RG-------------HGLS-DKPETGYEANDYAD---DIA-GLIRTLARGHAILVGHSLG 144
Query: 189 GHLSFVFSMKYPHMVHKLVI--------------------WGTKSFLTIDNVRVFEGMRR 228
S + KYP +V +V G++ F I V + R
Sbjct: 145 ARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIKAVEAYLAGRY 204
Query: 229 LSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVF 288
+ + R Y + + + R+ V PVL+
Sbjct: 205 PNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARG---LRSDLVPAYRDVTKPVLIV 261
Query: 289 HSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+VS + H + ++ + NFI
Sbjct: 262 RGESSKLVSAAALAKTSRLRPDLPVVVVPGADHYVNEVSPEITLKAITNFI 312
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 50.5 bits (120), Expect = 3e-07
Identities = 27/212 (12%), Positives = 60/212 (28%), Gaps = 20/212 (9%)
Query: 144 GYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMV 203
G + P + +++ D+ +L+ L + G G ++ +++ +P V
Sbjct: 77 GMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTV 136
Query: 204 HKLVIWGTKSFLTIDNVR---VFEGM----------RRLSNWSPMARSEVLKAYDNDVNY 250
LV+ G+ S SE+++ Y
Sbjct: 137 EGLVLINIDPNAKGWMDWAAHKLTGLTSSIPDMILGHLFSQEELSGNSELIQKY---RGI 193
Query: 251 ITGIFNQ--YVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVS-TQQVQSLLNQ 307
I N N N + + PV++ + S L+
Sbjct: 194 IQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHEDAVVECNSKLDP 253
Query: 308 LKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ + + + G + E + F+
Sbjct: 254 TQ-TSFLKMADSGGQPQLTQPGKLTEAFKYFL 284
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 3e-07
Identities = 38/220 (17%), Positives = 70/220 (31%), Gaps = 30/220 (13%)
Query: 144 GYGQS-LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFG--WCDGGHLSFVFSMKYP 200
G+G+S P + F + + L L + +V+L W GG L + P
Sbjct: 83 GFGRSDKPTDDAVYTFGFHRRSLL---AFLDALQLERVTLVCQDW--GGILGLTLPVDRP 137
Query: 201 HMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMAR-------------SEVLKAYD-- 245
+V +L++ T + + + FE R SP + AYD
Sbjct: 138 QLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAP 197
Query: 246 -NDVNYITGIFNQYVDMVNLIFK----SYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ 300
+ G+ + +V + GR P + A D ++ +
Sbjct: 198 FPGPEFKAGVRR-FPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLGPEV 256
Query: 301 VQSLLNQLKFC-QYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ L ++ C + +GGH + F
Sbjct: 257 MGMLRQAIRGCPEPMIVEAGGHFVQEHGEPIARAALAAFG 296
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 8e-07
Identities = 35/216 (16%), Positives = 67/216 (31%), Gaps = 29/216 (13%)
Query: 144 GYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMV 203
G G + + I + ++ L G+ ++ G G + ++ YP V
Sbjct: 51 GTGNNPDTLAE--DYS-IAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASV 107
Query: 204 HKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDV--NYITGIFNQY--- 258
L+ + R F+ RL S +A+ +
Sbjct: 108 TVLISVNGWLRINAHTRRCFQVRERL------LYSGGAQAWVEAQPLFLYPADWMAARAP 161
Query: 259 ---VDMVNLIFKSYGRNVY------------QELLPYVDVPVLVFHSADDVMVSTQQVQS 303
+ + G+N + PV + ++DD++V T
Sbjct: 162 RLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSE 221
Query: 304 LLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
L L Q GGH+C++ + FN + N +
Sbjct: 222 LHAALPDSQKMVMPYGGHACNVTDPETFNALLLNGL 257
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 2e-06
Identities = 49/286 (17%), Positives = 101/286 (35%), Gaps = 42/286 (14%)
Query: 76 FFSIKGCDIRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
+ ++ G ++ + G A + + LG + + Q+ A F + +D G
Sbjct: 6 YAAVNGTELHYRIDGERHGNAPWIVLSNS-LGTDLSMWAPQVAALSKH-FRVLRYDTRG- 62
Query: 133 VVLYLLGKTCSGYGQS-LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHL 191
+G S PKG P+ IE+ L+ L + + + G GG
Sbjct: 63 ------------HGHSEAPKG----PYT-IEQLTGDVLGLMDTLKIARANFCGLSMGGLT 105
Query: 192 SFVFSMKYPHMVHKLVIWGTKSFLT--------IDNVRVFEGMRRLSNWSPMAR---SEV 240
+ ++ + ++ + T + + R EGM L++ + R ++
Sbjct: 106 GVALAARHADRIERVALCNTAARIGSPEVWVPRAVKART-EGMHALADAV-LPRWFTADY 163
Query: 241 LKAYDNDVNYITGIFNQYVDMVNLI--FKSYGRNVYQELLPYVDVPVLVFHSADDVMVST 298
++ + I +F D ++ + P + VP LV D+ +
Sbjct: 164 MEREPVVLAMIRDVFVH-TDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATP 222
Query: 299 QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344
Q + L + +Y + H +I+ F + +F L E K
Sbjct: 223 AQGRELAQAIAGARYVEL-DASHISNIERADAFTKTVVDF-LTEQK 266
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 2e-06
Identities = 31/202 (15%), Positives = 65/202 (32%), Gaps = 16/202 (7%)
Query: 143 SGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHM 202
+G+G S K + IE+ I + V + L G GG ++ + + YP +
Sbjct: 84 NGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDL 143
Query: 203 VHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMV 262
+ K+V+ + L D + + + + G +
Sbjct: 144 IKKVVLLAPAATLKGD------ALEGNTQGVTYNPDHIPDRLPFKDLTLGGFY--LRIAQ 195
Query: 263 NLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHS 322
L +Y+ + PV + H DD +VS + + + H
Sbjct: 196 QL-------PIYEVSAQF-TKPVCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADHC 247
Query: 323 CHIKHGQVFNEISRNFILEENK 344
+ + ++ +F+ N
Sbjct: 248 FSDSYQKNAVNLTTDFLQNNNA 269
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 3e-06
Identities = 44/309 (14%), Positives = 90/309 (29%), Gaps = 62/309 (20%)
Query: 70 DVFTEGFFSIKGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWD 128
+ E F G I +GS V+ +G + E ++++ + + + D
Sbjct: 2 NAMEEKFLEFGGNQICLCSWGSPEHPVVLCIHG-ILEQGLAWQEVALPLAAQGYRVVAPD 60
Query: 129 PPGNVVLYLLGKTCSGYGQS--LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFG-- 184
G +G+S L S+ ++ I +++ L + L G
Sbjct: 61 LFG-------------HGRSSHLEMVTSYSSLTFLA---QID-RVIQELPDQPLLLVGHS 103
Query: 185 WCDGGHLSFVFSMKYPHMVHKLVI--------------------WGTKSFLTIDNVRVFE 224
G L+ + P + +L++ + +F
Sbjct: 104 M--GAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTPQHPIFP 161
Query: 225 GM-----RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVD-------MVNLIFKSYGRN 272
+ R ++ G D ++ L GR+
Sbjct: 162 DVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRS 221
Query: 273 VYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFN 332
Y E+L + VP + + + + +Q + + SGGH+ HI
Sbjct: 222 QYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQAKRVFL-SGGHNLHIDAAAALA 280
Query: 333 EISRNFILE 341
+ IL
Sbjct: 281 SL----ILT 285
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 4e-06
Identities = 50/288 (17%), Positives = 95/288 (32%), Gaps = 56/288 (19%)
Query: 76 FFSIKGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVV 134
+ G + + G+ +L + +G + + QL A F + +D G
Sbjct: 9 LATSDGASLAYRLDGAAEKPLLALSNS-IGTTLHMWDAQLPALTRH-FRVLRYDARG--- 63
Query: 135 LYLLGKTCSGYGQS-LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSF 193
+G S +P G P+ + + ELL L V + G GG +
Sbjct: 64 ----------HGASSVPPG----PYT-LARLGEDVLELLDALEVRRAHFLGLSLGGIVGQ 108
Query: 194 VFSMKYPHMVHKLVIWGTKSFLT--------IDNVRVFEGMRR-----LSNW-SPM---A 236
++ P + +LV+ T ++L I V E M L NW P
Sbjct: 109 WLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMSETAAGFLGNWFPPALLER 168
Query: 237 RSEVLKAY-----DNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSA 291
V++ + + + + G F D + L ++ P LV A
Sbjct: 169 AEPVVERFRAMLMATNRHGLAGSFAAVRDTD-----------LRAQLARIERPTLVIAGA 217
Query: 292 DDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
D + + + + + + H +++ Q F +F+
Sbjct: 218 YDTVTAASHGELIAASIAGARLVTL-PAVHLSNVEFPQAFEGAVLSFL 264
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 4e-06
Identities = 47/292 (16%), Positives = 90/292 (30%), Gaps = 43/292 (14%)
Query: 72 FTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPG 131
T G + D+ + +G+G V+ G +S+++Q A + I +D G
Sbjct: 4 ITVGQENSTSIDLYYEDHGTGVPVVLIH-G-FPLSGHSWERQSAALLDAGYRVITYDRRG 61
Query: 132 NVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGG-H 190
+GQS + + D+ +L+ L + L G+ G
Sbjct: 62 -------------FGQSSQPTTGYDYDTFAA---DLN-TVLETLDLQDAVLVGFSMGTGE 104
Query: 191 LSFVFSMKYPHMVHKLVIWGT---KSFLTIDN------VRVFEGMRR--LSNWSPMARSE 239
++ S + + + T DN F+G+ ++
Sbjct: 105 VARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGF 164
Query: 240 VLKAYDNDVNYITGIFNQYVD-MVNLIFKSYGRNVYQ----------ELLPYVDVPVLVF 288
Y+ D N T I + V N +P +DVP L+
Sbjct: 165 FNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALIL 224
Query: 289 HSADDVMVSTQQVQSLLNQL-KFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
H D + + + ++ +Y + H H + N F+
Sbjct: 225 HGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFL 276
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 4e-06
Identities = 38/261 (14%), Positives = 77/261 (29%), Gaps = 53/261 (20%)
Query: 117 FDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIE---EDVDIAYELLK 173
D T I +D G G S + F + ++ +
Sbjct: 78 ADETGRTVIHYDQVG-------------CGNSTHLPDAPADFWTPQLFVDEFH---AVCT 121
Query: 174 LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGT--KSFLTIDNVRVFEGMRRLSN 231
LG+ + + G GG L +++ P + L I + L +
Sbjct: 122 ALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAET 181
Query: 232 WSPMARSEVLKAYDND--VNYITGIFNQYVDMVNLIFKSYGRNVYQ-------------- 275
+ + R E + + + ++V V + + +V Q
Sbjct: 182 RAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGP 241
Query: 276 ---------------ELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGG 320
+ LP V PVLV D + + Q ++ + + + F
Sbjct: 242 NEFHVVGTLGDWSVIDRLPDVTAPVLVIAGEHD-EATPKTWQPFVDHIPDVRSHVFPGTS 300
Query: 321 HSCHIKHGQVFNEISRNFILE 341
H H++ + F + F+ +
Sbjct: 301 HCTHLEKPEEFRAVVAQFLHQ 321
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Length = 446 | Back alignment and structure |
|---|
Score = 47.1 bits (111), Expect = 5e-06
Identities = 32/187 (17%), Positives = 59/187 (31%), Gaps = 24/187 (12%)
Query: 149 LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVI 208
LPK + +Y EE ++ ++ G V L G GG L + + +VI
Sbjct: 213 LPKTMETLHLEYFEEAMNYLLSHPEVKGP-GVGLLGISKGGELCLSMASFLKGITAAVVI 271
Query: 209 WGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKS 268
G+ + + + + E L + N I + Y D+V+++
Sbjct: 272 NGSVANVG---------------GTLRYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSP 316
Query: 269 YGRNVYQELLP--YVDVPVLVFHSADDVMV-STQQVQSLLNQLKF-----CQYYQFSSGG 320
+ +P + L DD S +L+ Q + G
Sbjct: 317 LEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETG 376
Query: 321 HSCHIKH 327
H +
Sbjct: 377 HYIEPPY 383
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 6e-06
Identities = 49/292 (16%), Positives = 90/292 (30%), Gaps = 45/292 (15%)
Query: 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
T G + D+ + +G+G Q + +G +S+++Q A + I +D G
Sbjct: 4 TVGQENSTSIDLYYEDHGTG-QPVVLIHG-FPLSGHSWERQSAALLDAGYRVITYDRRG- 60
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQY-IEEDVDIAYELLKLLGVCKVSLFGWCDGGHL 191
+GQS S Y + +L+ L + L G+ G
Sbjct: 61 ------------FGQS-----SQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGE 103
Query: 192 SFVFSMKY-PHMVHKLVIWGT---KSFLTIDN------VRVFEGMR--RLSNWSPMARSE 239
+ Y + K+ + T DN F+G+ ++
Sbjct: 104 VARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGF 163
Query: 240 VLKAYDNDVNYITGIFNQYVD-MVNLIFKSYGRNVYQ----------ELLPYVDVPVLVF 288
Y+ D N T I + V N +P +DVP L+
Sbjct: 164 FNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALIL 223
Query: 289 HSADDVMVSTQQVQSLLNQL-KFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
H D + + + ++ +Y + H H + N F+
Sbjct: 224 HGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFL 275
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 6e-06
Identities = 48/285 (16%), Positives = 84/285 (29%), Gaps = 45/285 (15%)
Query: 81 GCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGK 140
++ + GSG V+ G +S+++Q + + I +D G
Sbjct: 12 PIELYYEDQGSGQPVVLIH-G-YPLDGHSWERQTRELLAQGYRVITYDRRG--------- 60
Query: 141 TCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY- 199
+G S + + D+ +L+ L + V L G+ G + +Y
Sbjct: 61 ----FGGSSKVNTGYDYDTFAA---DLH-TVLETLDLRDVVLVGFSMGTGELARYVARYG 112
Query: 200 PHMVHKLVIWGTKSFL---TIDN-----VRVFEGMRRL--SNWSPMARSEVLKAYDNDVN 249
V KL + DN VF+G+ + Y+ D N
Sbjct: 113 HERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDEN 172
Query: 250 YITGIFNQYVD-MVNLIFKSYGRNVYQ----------ELLPYVDV---PVLVFHSADDVM 295
+ I Q V N+ S Y + V P L+ H D +
Sbjct: 173 LGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNI 232
Query: 296 VSTQQVQSLLNQL-KFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ +Q Y + H H N + F+
Sbjct: 233 LPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTFL 277
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 9e-06
Identities = 40/198 (20%), Positives = 66/198 (33%), Gaps = 25/198 (12%)
Query: 166 DIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP-HMVHKLVIWGT--KSFL-TIDNV- 220
D+A ++ LG+ G GG + ++P V K V+ + T N
Sbjct: 78 DVA-AVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPG 136
Query: 221 ----RVFEGMRR--LSNWSPMAR---SEVLKAYDNDVNYIT-GIFNQYVDMVNL------ 264
VF+G + SN + R + Y+ + GI + +
Sbjct: 137 GLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAH 196
Query: 265 --IFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL-KFCQYYQFSSGGH 321
++ + + E L + PVLV H DD +V + L +L + H
Sbjct: 197 YDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPH 256
Query: 322 SCHIKHGQVFNEISRNFI 339
H V N FI
Sbjct: 257 GMPTTHADVINADLLAFI 274
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 30/187 (16%), Positives = 62/187 (33%), Gaps = 31/187 (16%)
Query: 144 GYGQSLPKGRSFVP-FQYIEEDVDIAYELLK-LLGVCKVSLFG--WCDGGHLSFVFSMKY 199
G+GQS R V F DV + ++ V L G GG ++ + + +
Sbjct: 97 GHGQS-EGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSM--GGAIAILTAAER 153
Query: 200 PHMVHKLVIWGT---KSFLTIDNVRVFEGMRRLSNWSPMAR------------SEVLKAY 244
P +V+ + + +V + L+ P + Y
Sbjct: 154 PGHFAGMVLISPLVLANPESATTFKVL-AAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIY 212
Query: 245 DNDVNYITGIF--NQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQ 302
++D + ++N + + + LP + VP L+ + D + ++
Sbjct: 213 NSDPLICRAGLKVCFGIQLLNAVSRV------ERALPKLTVPFLLLQGSADRLCDSKGAY 266
Query: 303 SLLNQLK 309
L+ K
Sbjct: 267 LLMELAK 273
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 31/187 (16%), Positives = 64/187 (34%), Gaps = 31/187 (16%)
Query: 144 GYGQSLPKGRSFVP-FQYIEEDVDIAYELLK-LLGVCKVSLFG--WCDGGHLSFVFSMKY 199
G+GQS R V F DV + ++ V L G GG ++ + + +
Sbjct: 79 GHGQS-EGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSM--GGAIAILTAAER 135
Query: 200 PHMVHKLVIWGT---KSFLTIDNVRVFEGMRRLSNWSPMARS------------EVLKAY 244
P +V+ + + +V + L++ P S + Y
Sbjct: 136 PGHFAGMVLISPLVLANPESATTFKVL-AAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIY 194
Query: 245 DNDVNYITGIF--NQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQ 302
++D + ++N + + + LP + VP L+ + D + ++
Sbjct: 195 NSDPLICRAGLKVCFGIQLLNAVSRV------ERALPKLTVPFLLLQGSADRLCDSKGAY 248
Query: 303 SLLNQLK 309
L+ K
Sbjct: 249 LLMELAK 255
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 3e-05
Identities = 15/89 (16%), Positives = 36/89 (40%)
Query: 144 GYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMV 203
G+G+S + + ++ + + LK GV + + G GG + + +++YP +V
Sbjct: 66 GFGRSASSEKYGIDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIV 125
Query: 204 HKLVIWGTKSFLTIDNVRVFEGMRRLSNW 232
++ ++ + L W
Sbjct: 126 DGIIAVAPAWVESLKGDMKKIRQKTLLVW 154
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 4e-05
Identities = 37/232 (15%), Positives = 62/232 (26%), Gaps = 45/232 (19%)
Query: 144 GYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFG--WCDGGHLSFVFSMKYPH 201
G G+S K F +D ++ LG+ +V L W G L F ++ + P
Sbjct: 68 GMGKS-DKPDLDYFFDDHVRYLD---AFIEALGLEEVVLVIHDW--GSALGFHWAKRNPE 121
Query: 202 MVHKLVI--------------------------WGTKSFLTIDNVRVFEGMRRLSNWSPM 235
V + L ID EG P+
Sbjct: 122 RVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPL 181
Query: 236 ARSEVLKAYD---NDVNYITGIFNQYVDMVNLIFKSYGRNV-----YQELLPYVDVPVLV 287
+ Y ++ ++ I V Y L VP L+
Sbjct: 182 TE-VEMDHYREPFLKPVDREPLWRFPNEL--PIAGEPANIVALVEAYMNWLHQSPVPKLL 238
Query: 288 FHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
F V++ + L L C+ G H + + ++
Sbjct: 239 FWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWL 290
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 6e-05
Identities = 31/183 (16%), Positives = 61/183 (33%), Gaps = 21/183 (11%)
Query: 143 SGYGQSLPKGRSFV---PFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY 199
G+G+S F F+++ + + KL V + + G GG + +
Sbjct: 65 YGHGKS---DGKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAME 121
Query: 200 PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYV 259
++ L+ + + + R E + + P + L A+D + G + +
Sbjct: 122 RDIIKALIPLSPAAMIP-EIARTGELLGL--KFDPENIPDELDAWDGRK--LKGNYVR-- 174
Query: 260 DMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSG 319
+ V + Y PVL+ H D V + + Q K C+
Sbjct: 175 VAQTI-------RVEDFVDKY-TKPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGD 226
Query: 320 GHS 322
H
Sbjct: 227 THC 229
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 8e-05
Identities = 30/242 (12%), Positives = 59/242 (24%), Gaps = 54/242 (22%)
Query: 144 GYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMV 203
G+S + + P+ E A +L GV + + G G ++ V ++ + +
Sbjct: 61 DTGRSTTRDFAAHPYG-FGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRL 119
Query: 204 HKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPM---------------------------- 235
L + + + MR +
Sbjct: 120 SSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKR 179
Query: 236 ------------------ARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQEL 277
+A D+ + + Y L R
Sbjct: 180 VSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYS----LTLPPPSR---AAE 232
Query: 278 LPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRN 337
L V VP LV + D + + L + + + GH+ E+
Sbjct: 233 LREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALPSSVHGPLAEVILA 292
Query: 338 FI 339
Sbjct: 293 HT 294
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 8e-05
Identities = 43/292 (14%), Positives = 66/292 (22%), Gaps = 78/292 (26%)
Query: 81 GCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGK 140
G I F + GSG + G L R P FT I +D G
Sbjct: 12 GTPIAFERSGSG-PPVVLVGGALST-RAGGAPLAERLAPH-FTVICYDRRG--------- 59
Query: 141 TCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP 200
G S + + IE D+A ++ G +FG G LS + +
Sbjct: 60 ----RGDS-GDTPPYAVEREIE---DLA-AIIDAAGG-AAFVFGMSSGAGLSLLAAASGL 109
Query: 201 HMVHKLVIWGTKSFLTIDN----------------------VRVF------------EGM 226
+ V + V F M
Sbjct: 110 PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDAVTYFMTEGVGVPPDLVAQM 169
Query: 227 RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVL 286
++ W M YD + + +P L
Sbjct: 170 QQAPMWPGMEAVAHTLPYD-------------------HAVMGDNTIPTARFASISIPTL 210
Query: 287 VFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNF 338
V Q L + + +Y + H + F
Sbjct: 211 VMDGGASPAWIRHTAQELADTIPNARYVTLENQT---HTVAPDAIAPVLVEF 259
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 9e-05
Identities = 35/198 (17%), Positives = 61/198 (30%), Gaps = 25/198 (12%)
Query: 166 DIAYELLKLLGVCKVSLFGW-CDGGHLSFVFSMKYPHMVHKLVIWGT--KSFL-TIDN-- 219
D+A L + L + G GG ++ + P V K V+ + + N
Sbjct: 77 DVA-ALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPD 135
Query: 220 ---VRVFEGMRR--LSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLI--------- 265
+ VF+ R +N + + + +D L
Sbjct: 136 GLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAH 195
Query: 266 ---FKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL-KFCQYYQFSSGGH 321
++ + + L +DVPVLV H DD +V +L + H
Sbjct: 196 YECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPH 255
Query: 322 SCHIKHGQVFNEISRNFI 339
H +V N F+
Sbjct: 256 GMLSTHPEVLNPDLLAFV 273
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 1e-04
Identities = 47/347 (13%), Positives = 105/347 (30%), Gaps = 89/347 (25%)
Query: 40 LENQGSQKTYGLQETLLDTQLPSRTDFIHQDV--FTEGFFSIKGCDIRFIKYGSGAQVLF 97
++ + + Y ++ L + +F +DV + S + D I
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEID-HIIMSKDAVSGTL 65
Query: 98 FTYGVL----GEIRNSFKKQLTAFD-PKLFTSI---FWDPPGNVVLYL--LGKTCSGYGQ 147
+ L E+ F +++ + L + I P +Y+ + + Q
Sbjct: 66 RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND-NQ 124
Query: 148 SLPKGRSFVPFQYIEEDVD-IAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKL 206
K V + + LL+L V + G +
Sbjct: 125 VFAKY--NVS---RLQPYLKLRQALLELRPAKNVLIDG------------VL-------- 159
Query: 207 VIWGT-KSFLTIDNVRVFEGMRRLSN---W-------SPMARSEVLKA--YDNDVNYITG 253
G+ K+++ +D ++ ++ W SP E+L+ Y D N+ +
Sbjct: 160 ---GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 254 IFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDV---------------MVST 298
+ + + + PY + +LV +V +++T
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENC-LLVL---LNVQNAKAWNAFNLSCKILLTT 272
Query: 299 QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENKT 345
+ + + + L S + HI + S +E K+
Sbjct: 273 RF-KQVTDFL---------SAATTTHI----SLDHHSMTLTPDEVKS 305
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 1e-04
Identities = 70/443 (15%), Positives = 123/443 (27%), Gaps = 139/443 (31%)
Query: 15 FLCSFDF--IPRTMSGKVKRKDLVKKIL-ENQGSQKTYGLQETLLDTQ------------ 59
F+ +FD + + +++ + I+ T L TLL Q
Sbjct: 29 FVDNFDCKDVQDMPKSILSKEE-IDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVL 87
Query: 60 ----------------LPS--RTDFIHQ--------DVFT-------EGFFSIKGC--DI 84
PS +I Q VF + + ++ ++
Sbjct: 88 RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL 147
Query: 85 RFIKY-------GSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNV---- 133
R K GSG + L + K D K IFW N
Sbjct: 148 RPAKNVLIDGVLGSGKTWV-----ALDVCLS--YKVQCKMDFK----IFWLNLKNCNSPE 196
Query: 134 -VLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLL-------------GVCK 179
VL +L K + RS I EL +LL V
Sbjct: 197 TVLEMLQKLLYQIDPNW-TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN 255
Query: 180 VSL---FGW-C-------DGGHLSFVFSMKYPHMVHKLVIWG-TKS-----FLTIDNVRV 222
F C F+ + H+ T L + R
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315
Query: 223 FEGMRRLSNWSPMARS---EVLKAYDNDVNYITGIFNQY-VDMVNLIFKS--------YG 270
+ R + +P S E ++ + + D + I +S
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLATWDN----WKHVNCDKLTTIIESSLNVLEPAEY 371
Query: 271 RNVYQEL--LPY-VDVPVLVF------HSADDVMVSTQQVQ--SLLNQLKFCQYYQFSSG 319
R ++ L P +P ++ DVMV ++ SL+ + Q + +
Sbjct: 372 RKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEK----QPKESTIS 427
Query: 320 GHSCHIK-HGQVFNEIS--RNFI 339
S +++ ++ NE + R+ +
Sbjct: 428 IPSIYLELKVKLENEYALHRSIV 450
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 1e-04
Identities = 25/207 (12%), Positives = 57/207 (27%), Gaps = 41/207 (19%)
Query: 144 GYGQSLPKGRSFVPFQYIEE--DVDIAYELLKLLGVC---KVSLFGWCDGGHLSFVFSMK 198
G+ + D+ AY+ L L +++ G GG+LS + + +
Sbjct: 65 GHEGY---ASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRE 121
Query: 199 YPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQY 258
P V L + + + + + R + + +
Sbjct: 122 RP--VEWLALRSPALYKDAHWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQY---- 175
Query: 259 VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMV---STQQVQSLLNQLKFCQYYQ 315
VL+ + +DV+V + +
Sbjct: 176 -----------------------KGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRV 212
Query: 316 FSSGGHSCHIK-HGQVFNEISRNFILE 341
+ H+ +K H Q + +++ E
Sbjct: 213 IAGADHALSVKEHQQEYTRALIDWLTE 239
|
| >3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 2 DQVNPSKRLSGGV-FLCSFDFIPRTMSGKVKRKDLVKKILENQGSQK 47
QV +K+L GGV F+ D +P+ ++GK+ + + + +++ + K
Sbjct: 504 SQVTTAKKLRGGVVFV---DEVPKGLTGKLDARKIREILIKAKKGGK 547
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 41.3 bits (96), Expect = 3e-04
Identities = 32/252 (12%), Positives = 71/252 (28%), Gaps = 50/252 (19%)
Query: 144 GYGQSLPKGRSFVPFQYIEEDV--DIAYELLKLLGVC-----KVSLFGWCDGGHLSFVFS 196
+G S + R + + D D+ LG + G GG +
Sbjct: 96 NHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACD 155
Query: 197 MKYPHMVHKLVI-----------WGTKSFLTIDNVRVFEGM------RRLSNWSPMA--- 236
+ P++ H L++ + L D+ ++ E + + +++ +
Sbjct: 156 VLQPNLFHLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYV 215
Query: 237 ------------RSEVLKAY-----------DNDVNYITGIFNQYVDMVNLIFKSYGRNV 273
S++L+ D D + Q +++ +
Sbjct: 216 KYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPF 275
Query: 274 YQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNE 333
+ +V + A Q L L+ G H +++ + E
Sbjct: 276 LISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQNYHLDVIPGGSHLVNVEAPDLVIE 335
Query: 334 ISRNFILEENKT 345
+ I E T
Sbjct: 336 RINHHIHEFVLT 347
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 5e-04
Identities = 35/243 (14%), Positives = 55/243 (22%), Gaps = 56/243 (23%)
Query: 144 GYGQSLPKGRSFVPFQY-IEEDVDIAYELLKLLGVCKVSLFG--WCDGGHLSFVFSMKYP 200
G+GQS Y + V ++ GV L W G L+F + + P
Sbjct: 65 GFGQS-----GKPDIAYRFFDHVRYLDAFIEQRGVTSAYLVAQDW--GTALAFHLAARRP 117
Query: 201 HMVHKLVI--------------------WGTKSFLTIDNVRVF-----------EGMRRL 229
V L + R F E +
Sbjct: 118 DFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFV 177
Query: 230 SNWSPMARS-----EVLKAYD---NDVNYITGIFNQYVDMVNLIFKSYGRNV-----YQE 276
P E + Y + ++ I
Sbjct: 178 ERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPREL--PIAGEPADVYEALQSAHA 235
Query: 277 LLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISR 336
L P L+F +VS + + L C + +G H H
Sbjct: 236 ALAASSYPKLLFTGEPGALVSPEFAERFAASLTRCALIRLGAGLHYLQEDHADAIGRSVA 295
Query: 337 NFI 339
+I
Sbjct: 296 GWI 298
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 40.4 bits (94), Expect = 5e-04
Identities = 18/162 (11%), Positives = 45/162 (27%), Gaps = 14/162 (8%)
Query: 163 EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRV 222
+ Y L+ G + L +++ + L+ L +
Sbjct: 91 NSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLE--LSFLITAVGVVNLRDTLEKA 148
Query: 223 FEGMRRLSNWSPMARSEVLKAYDNDV-NYITGIFNQYVDMVNLIFKSYGRNVYQELLPYV 281
+ + + ++ F + D ++
Sbjct: 149 LGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVAN---------T 199
Query: 282 DVPVLVFHSADDVMVSTQQVQSLLNQLKF--CQYYQFSSGGH 321
VP++ F + +D V ++V +L ++ C+ Y H
Sbjct: 200 SVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSH 241
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422 | Back alignment and structure |
|---|
Score = 40.6 bits (94), Expect = 6e-04
Identities = 33/207 (15%), Positives = 65/207 (31%), Gaps = 32/207 (15%)
Query: 131 GNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVC--KVSLFGWCDG 188
G L L ++ + +Y EE V +L+ V + L G G
Sbjct: 183 GFATLALAYYNFEDLPNNMDN----ISLEYFEEAVCY---MLQHPQVKGPGIGLLGISLG 235
Query: 189 GHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDV 248
+ + ++ + I G+ G+ + + + D+
Sbjct: 236 ADICLSMASFLKNVSATVSINGS-------------GISGNTAI--NYKHSSIPPLGYDL 280
Query: 249 NYITGIFNQYVDMVNLIFKSYGRNVYQELLPY--VDVPVLVFHSADDVMV-STQQVQSLL 305
I F+ VD+V++ G ++P P+L+ DD S Q++
Sbjct: 281 RRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVS 340
Query: 306 NQLK-----FCQYYQFSSGGHSCHIKH 327
+L+ Q + GH +
Sbjct: 341 ERLQAHGKEKPQIICYPGTGHYIEPPY 367
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 Length = 273 | Back alignment and structure |
|---|
Score = 40.0 bits (93), Expect = 7e-04
Identities = 28/193 (14%), Positives = 60/193 (31%), Gaps = 23/193 (11%)
Query: 156 VPFQYIEEDVDIAYE-LLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLV---IWGT 211
+ D L+K G+ +++ G G + K+ +
Sbjct: 91 ITNPRNLYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQML 150
Query: 212 KSFLTIDNVRVFEG---MRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKS 268
+ V + +G ++ L P A+ + + Q +
Sbjct: 151 GLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTRLAFPDGI--------QMYEEEPSRVMP 202
Query: 269 YGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYYQFSSGGHSCH 324
Y + + + HS D +++ +Q L++ L+ + Y G H+
Sbjct: 203 YVKKALSRFSI----DMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDV 258
Query: 325 IKHGQVFNEISRN 337
K+G+V I N
Sbjct: 259 YKNGKVAKYIFDN 271
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 345 | |||
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.98 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.98 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.98 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.98 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.98 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.97 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.97 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.97 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.97 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.97 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.97 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.97 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.97 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.97 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.97 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.97 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.97 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.97 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.97 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.97 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.97 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.97 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.97 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.97 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.97 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.97 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.97 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.97 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.97 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.97 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.97 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.96 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.96 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.96 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.94 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.96 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.96 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.96 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.96 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.96 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.95 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.94 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.94 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.94 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.94 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.94 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.94 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.94 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.94 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.94 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.93 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.93 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.93 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.93 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.93 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.93 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.92 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.92 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.92 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.92 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.92 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.92 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.92 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.92 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.92 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.91 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.91 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.91 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.91 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.91 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.91 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.91 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.91 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.91 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.9 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.9 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.9 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.9 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.9 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.9 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.9 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.9 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.9 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.9 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.89 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.89 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.89 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.88 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.87 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.87 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.87 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.87 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.87 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.87 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.87 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.87 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.86 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.86 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.86 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.86 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.86 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.86 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.86 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.86 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.86 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.86 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.86 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.85 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.85 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.85 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.85 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.84 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.84 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.84 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.84 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.84 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.82 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.82 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.82 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.82 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.82 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.81 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.81 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.81 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.81 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.81 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.81 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.8 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.8 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.8 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.8 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.79 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.78 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.77 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.77 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.76 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.76 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.76 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.75 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.75 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.75 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.74 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.74 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.74 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.74 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.72 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.72 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.69 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.69 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.67 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.65 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.64 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.63 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.63 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.61 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.59 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.59 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.59 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.59 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.58 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.57 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.56 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.56 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.52 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.49 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.48 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.48 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.48 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.46 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.43 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.42 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.36 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.35 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.34 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.26 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.19 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 99.03 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.01 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.85 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.79 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.74 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.69 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.62 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.57 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.49 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.45 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.44 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.26 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.2 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.2 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.2 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.17 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.15 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.06 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.04 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 97.89 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 97.79 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.73 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 97.72 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 97.67 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.65 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 97.57 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 97.55 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.53 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.41 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.15 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 97.04 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 96.96 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.73 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.63 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 96.53 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 96.4 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.24 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.13 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 96.12 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 96.12 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 95.47 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 95.36 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 95.32 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 95.03 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 94.75 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 93.69 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 93.24 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 92.56 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 91.16 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 89.16 |
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=272.92 Aligned_cols=253 Identities=31% Similarity=0.635 Sum_probs=192.0
Q ss_pred ceeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 72 FTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 72 ~~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
+++.++.++|..++|...|+++|+|||+||++++....|..+++.|.++||+|+++|+|| ||.|+.+
T Consensus 2 ~~~~~~~~~g~~l~~~~~g~~~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G-------------~G~S~~~ 68 (254)
T 2ocg_A 2 VTSAKVAVNGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRG-------------YGHSRPP 68 (254)
T ss_dssp CEEEEEEETTEEEEEEEEECCSEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTT-------------STTCCSS
T ss_pred CceeEEEECCEEEEEEEecCCCCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCC-------------CCCCCCC
Confidence 346778889999999999888779999999988833789999999999999999999999 9999876
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccC
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSN 231 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 231 (345)
...+ +...+.++++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++..............+.....
T Consensus 69 ~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 147 (254)
T 2ocg_A 69 DRDF-PADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSK 147 (254)
T ss_dssp CCCC-CTTHHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGG
T ss_pred CCCC-ChHHHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHH
Confidence 6556 444477889999999999999999999999999999999999999999999999876544332222222222233
Q ss_pred CChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCc
Q psy4974 232 WSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFC 311 (345)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~ 311 (345)
+.......+...+... .....+..+...+...............+.++++|+|+++|++|.++|.+..+.+.+.++++
T Consensus 148 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~ 225 (254)
T 2ocg_A 148 WSERTRKPLEALYGYD--YFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGS 225 (254)
T ss_dssp SCHHHHHHHHHHHCHH--HHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTC
T ss_pred HHHHhHHHHHHHhcch--hhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCCCC
Confidence 3333333222222222 12222333333222221111112234567789999999999999999999999999999999
Q ss_pred EEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 312 QYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 312 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
++++++++||+++.++|+++++.|.+||+
T Consensus 226 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 226 RLHLMPEGKHNLHLRFADEFNKLAEDFLQ 254 (254)
T ss_dssp EEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred EEEEcCCCCCchhhhCHHHHHHHHHHHhC
Confidence 99999999999999999999999999983
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=259.91 Aligned_cols=245 Identities=15% Similarity=0.217 Sum_probs=182.0
Q ss_pred eeeEEEcCceEEEEEcCC-CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
..+++.+|.+++|...|+ +.|+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+.+.
T Consensus 7 ~~~~~~~g~~l~y~~~G~~~~p~lvl~hG~~~~~-~~w~~~~~~L~~~-~~vi~~D~rG-------------~G~S~~~~ 71 (266)
T 3om8_A 7 SFLATSDGASLAYRLDGAAEKPLLALSNSIGTTL-HMWDAQLPALTRH-FRVLRYDARG-------------HGASSVPP 71 (266)
T ss_dssp EEEECTTSCEEEEEEESCTTSCEEEEECCTTCCG-GGGGGGHHHHHTT-CEEEEECCTT-------------STTSCCCC
T ss_pred eEEeccCCcEEEEEecCCCCCCEEEEeCCCccCH-HHHHHHHHHhhcC-cEEEEEcCCC-------------CCCCCCCC
Confidence 345667999999999986 457999999999994 9999999999985 9999999999 99998776
Q ss_pred CCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH--HHHHHhHhcc
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV--RVFEGMRRLS 230 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~~~~~~~ 230 (345)
..| +++++++++.++++++++++++|+||||||.+|+.+|.++|++|+++|++++......... ..........
T Consensus 72 ~~~----~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 147 (266)
T 3om8_A 72 GPY----TLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAE 147 (266)
T ss_dssp SCC----CHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCS
T ss_pred CCC----CHHHHHHHHHHHHHHhCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHccc
Confidence 666 7888999999999999999999999999999999999999999999999998665332211 1111111101
Q ss_pred CCChhhHHHHHHHcccCCchh---hhhHHHHHH--------HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH
Q psy4974 231 NWSPMARSEVLKAYDNDVNYI---TGIFNQYVD--------MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ 299 (345)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~ 299 (345)
............++... +. ....+.+.. .+...+......+....+.++++|+|+|+|++|.++|.+
T Consensus 148 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~ 225 (266)
T 3om8_A 148 DMSETAAGFLGNWFPPA--LLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAAS 225 (266)
T ss_dssp SSHHHHHHHHHHHSCHH--HHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHH
T ss_pred cHHHHHHHHHHHhcChh--hhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHH
Confidence 11111111111222111 00 000111111 111111222233445667889999999999999999999
Q ss_pred HHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 300 QVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.++.+++.+|++++++++ +||++++|+|+++++.|.+||.
T Consensus 226 ~~~~l~~~ip~a~~~~i~-~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 226 HGELIAASIAGARLVTLP-AVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp HHHHHHHHSTTCEEEEES-CCSCHHHHCHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEeC-CCCCccccCHHHHHHHHHHHhc
Confidence 999999999999999997 8999999999999999999995
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-35 Score=252.33 Aligned_cols=246 Identities=14% Similarity=0.248 Sum_probs=178.9
Q ss_pred eeeEEEcCceEEEEEcCC-C--CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS-G--AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~-~--~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
..+++++|.+++|...|+ + .|+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+.
T Consensus 4 m~~~~~~g~~l~y~~~g~~~~~~~~vvllHG~~~~~-~~~~~~~~~L~~~-~~vi~~D~~G-------------~G~S~~ 68 (266)
T 2xua_A 4 MPYAAVNGTELHYRIDGERHGNAPWIVLSNSLGTDL-SMWAPQVAALSKH-FRVLRYDTRG-------------HGHSEA 68 (266)
T ss_dssp -CEEECSSSEEEEEEESCSSSCCCEEEEECCTTCCG-GGGGGGHHHHHTT-SEEEEECCTT-------------STTSCC
T ss_pred CCeEEECCEEEEEEEcCCccCCCCeEEEecCccCCH-HHHHHHHHHHhcC-eEEEEecCCC-------------CCCCCC
Confidence 356778999999999985 3 57999999999995 9999999999876 9999999999 999987
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS 230 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 230 (345)
+...+ +++++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++........ ..........
T Consensus 69 ~~~~~----~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~ 143 (266)
T 2xua_A 69 PKGPY----TIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPE-VWVPRAVKAR 143 (266)
T ss_dssp CSSCC----CHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHH-HHHHHHHHHH
T ss_pred CCCCC----CHHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchH-HHHHHHHHHH
Confidence 65555 788889999999999999999999999999999999999999999999999876543211 1111000000
Q ss_pred C-CChhhH-HHHHHHcccCCchh---hhhHHHHHH--------HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCC
Q psy4974 231 N-WSPMAR-SEVLKAYDNDVNYI---TGIFNQYVD--------MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVS 297 (345)
Q Consensus 231 ~-~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~ 297 (345)
. ...... .....++... +. ....+.+.. .+..........+....+.++++|+|+|+|++|.++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~ 221 (266)
T 2xua_A 144 TEGMHALADAVLPRWFTAD--YMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAAT 221 (266)
T ss_dssp HHCHHHHHHHHHHHHSCHH--HHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSC
T ss_pred hcChHHHHHHHHHHHcCcc--cccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCC
Confidence 0 000000 0011111110 00 000000100 1111111111123345677899999999999999999
Q ss_pred hHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 298 TQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
.+.++.+.+.++++++++++ +||+++.|+|+++++.|.+||.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~ 265 (266)
T 2xua_A 222 PAQGRELAQAIAGARYVELD-ASHISNIERADAFTKTVVDFLTEQ 265 (266)
T ss_dssp HHHHHHHHHHSTTCEEEEES-CCSSHHHHTHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHhCCCCEEEEec-CCCCchhcCHHHHHHHHHHHHHhc
Confidence 99999999999999999999 999999999999999999999754
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=249.51 Aligned_cols=248 Identities=16% Similarity=0.225 Sum_probs=179.0
Q ss_pred eeeEEEc--C---ceEEEEEcCCCCceEEEEcCcC---CCchhhHHHHH-HhhCCCCeEEEEeCCCCchhhhccCCccCC
Q psy4974 74 EGFFSIK--G---CDIRFIKYGSGAQVLFFTYGVL---GEIRNSFKKQL-TAFDPKLFTSIFWDPPGNVVLYLLGKTCSG 144 (345)
Q Consensus 74 ~~~~~~~--g---~~l~~~~~g~~~p~vv~lHG~~---~~~~~~~~~~~-~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~ 144 (345)
..+++++ | .+++|...|++ |+|||+||++ ++ ...|..++ +.|++. |+|+++|+||
T Consensus 10 ~~~~~~~~~g~~~~~l~y~~~G~g-~~vvllHG~~~~~~~-~~~w~~~~~~~L~~~-~~vi~~D~~G------------- 73 (286)
T 2puj_A 10 SKFVKINEKGFSDFNIHYNEAGNG-ETVIMLHGGGPGAGG-WSNYYRNVGPFVDAG-YRVILKDSPG------------- 73 (286)
T ss_dssp EEEEEECSTTCSSEEEEEEEECCS-SEEEEECCCSTTCCH-HHHHTTTHHHHHHTT-CEEEEECCTT-------------
T ss_pred ceEEEecCCCcceEEEEEEecCCC-CcEEEECCCCCCCCc-HHHHHHHHHHHHhcc-CEEEEECCCC-------------
Confidence 5678888 8 99999999976 5999999997 55 48899999 999887 9999999999
Q ss_pred CCCCCCCCC-CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc--h--h
Q psy4974 145 YGQSLPKGR-SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI--D--N 219 (345)
Q Consensus 145 ~G~s~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~--~ 219 (345)
||.|+.+.. .+ +++++++++.++++++++++++|+||||||.+|+.+|.++|++|+++|++++...... . .
T Consensus 74 ~G~S~~~~~~~~----~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~ 149 (286)
T 2puj_A 74 FNKSDAVVMDEQ----RGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMP 149 (286)
T ss_dssp STTSCCCCCSSC----HHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSS
T ss_pred CCCCCCCCCcCc----CHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccc
Confidence 999987654 44 7888899999999999999999999999999999999999999999999998653210 0 0
Q ss_pred HHHHHHhHh-ccCCC-hhhHHHHHHHcccCCchhhhhHHHHH-------HHHHHHHH---hh--CchhhhccCCCCCCCE
Q psy4974 220 VRVFEGMRR-LSNWS-PMARSEVLKAYDNDVNYITGIFNQYV-------DMVNLIFK---SY--GRNVYQELLPYVDVPV 285 (345)
Q Consensus 220 ~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~---~~--~~~~~~~~l~~i~~Pv 285 (345)
......+.. ..... ......+................... ........ .. ...+....+.++++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 229 (286)
T 2puj_A 150 MEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKT 229 (286)
T ss_dssp CHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCE
T ss_pred hhhHHHHHHHhhCCcHHHHHHHHHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCE
Confidence 011111110 00011 11111111111111000011111100 01111111 00 1122345677899999
Q ss_pred EEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 286 LVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 286 l~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
|+|+|++|.++|.+.++.+++.+|++++++++++||++++|+|+++++.|.+||++
T Consensus 230 Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 230 FITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGAWAQWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp EEEEETTCSSSCTHHHHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred EEEEECCCCccCHHHHHHHHHHCCCCeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999975
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=249.06 Aligned_cols=248 Identities=16% Similarity=0.192 Sum_probs=175.9
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCc--hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEI--RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~--~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
..++.++|.+++|...|++ |+|||+||++.+. +..|..+++.|++ +|+|+++|+|| ||.|+.+
T Consensus 7 ~~~~~~~g~~l~y~~~G~g-~~vvllHG~~~~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G-------------~G~S~~~ 71 (282)
T 1iup_A 7 GKSILAAGVLTNYHDVGEG-QPVILIHGSGPGVSAYANWRLTIPALSK-FYRVIAPDMVG-------------FGFTDRP 71 (282)
T ss_dssp CEEEEETTEEEEEEEECCS-SEEEEECCCCTTCCHHHHHTTTHHHHTT-TSEEEEECCTT-------------STTSCCC
T ss_pred cceEEECCEEEEEEecCCC-CeEEEECCCCCCccHHHHHHHHHHhhcc-CCEEEEECCCC-------------CCCCCCC
Confidence 6778899999999999976 4899999987542 2478888888865 59999999999 9999866
Q ss_pred CC-CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc
Q psy4974 152 GR-SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS 230 (345)
Q Consensus 152 ~~-~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 230 (345)
.. .| +++++++++.++++++++++++|+||||||.+|+.+|.++|++|+++|++++........ ..........
T Consensus 72 ~~~~~----~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~ 146 (282)
T 1iup_A 72 ENYNY----SKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVT-EGLNAVWGYT 146 (282)
T ss_dssp TTCCC----CHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCC-HHHHHHHTCC
T ss_pred CCCCC----CHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCC-HHHHHHhcCC
Confidence 43 44 688889999999999999999999999999999999999999999999999865422111 1111111110
Q ss_pred CCChhhHHHHHHHcccCCchhhhhHHHH---------HHHHHHHH--------HhhCchhhhccCCCCCCCEEEEEeCCC
Q psy4974 231 NWSPMARSEVLKAYDNDVNYITGIFNQY---------VDMVNLIF--------KSYGRNVYQELLPYVDVPVLVFHSADD 293 (345)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~--------~~~~~~~~~~~l~~i~~Pvl~i~G~~D 293 (345)
.........+.................. ...+..+. ..... ....+.++++|+|+|+|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~i~~P~lii~G~~D 224 (282)
T 1iup_A 147 PSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALAS--SDEDIKTLPNETLIIHGRED 224 (282)
T ss_dssp SCHHHHHHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCC--CHHHHTTCCSCEEEEEETTC
T ss_pred CcHHHHHHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhcccccccccccc--chhhhhhcCCCEEEEecCCC
Confidence 0000111111111100000000000000 00010100 00000 01457789999999999999
Q ss_pred CCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 294 VMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 294 ~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
.++|.+.++.+.+.++++++++++++||+++.|+|+++++.|.+||++..
T Consensus 225 ~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 274 (282)
T 1iup_A 225 QVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEAN 274 (282)
T ss_dssp SSSCHHHHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHTC-
T ss_pred CCCCHHHHHHHHHhCCCCeEEEECCCCCCccccCHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999998643
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=260.48 Aligned_cols=248 Identities=13% Similarity=0.112 Sum_probs=175.8
Q ss_pred eeeeEEEcC----ceEEEEEcCC-C-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCC
Q psy4974 73 TEGFFSIKG----CDIRFIKYGS-G-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYG 146 (345)
Q Consensus 73 ~~~~~~~~g----~~l~~~~~g~-~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G 146 (345)
+..+++++| .+++|...|+ . .|+|||+||++++. ..|..+++.|+++||+|+++|+|| ||
T Consensus 21 ~~~~~~~~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~-~~w~~~~~~L~~~g~rvia~Dl~G-------------~G 86 (310)
T 1b6g_A 21 SPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWS-YLYRKMIPVFAESGARVIAPDFFG-------------FG 86 (310)
T ss_dssp CCEEEESCTTCTTCEEEEEEEECTTCSCEEEECCCTTCCG-GGGTTTHHHHHHTTCEEEEECCTT-------------ST
T ss_pred CceEEEecCCccceEEEEEEeCCCCCCCEEEEECCCCCch-hhHHHHHHHHHhCCCeEEEeCCCC-------------CC
Confidence 467788888 9999999883 2 46999999999995 999999999998889999999999 99
Q ss_pred CCCCCC--CCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch------
Q psy4974 147 QSLPKG--RSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID------ 218 (345)
Q Consensus 147 ~s~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~------ 218 (345)
.|+.+. ..| +++++++++.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.......
T Consensus 87 ~S~~~~~~~~y----~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~ 162 (310)
T 1b6g_A 87 KSDKPVDEEDY----TFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFS 162 (310)
T ss_dssp TSCEESCGGGC----CHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHH
T ss_pred CCCCCCCcCCc----CHHHHHHHHHHHHHHcCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchh
Confidence 998654 234 78889999999999999999999999999999999999999999999999985421000
Q ss_pred --------hHHHHHH-hHhccCCChh---------hHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhC------chhh
Q psy4974 219 --------NVRVFEG-MRRLSNWSPM---------ARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYG------RNVY 274 (345)
Q Consensus 219 --------~~~~~~~-~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 274 (345)
....+.. .......... ........+... +...........+........ ....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T 1b6g_A 163 AFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAP--FPDTSYQAGVRKFPKMVAQRDQAXIDISTEA 240 (310)
T ss_dssp HTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTT--CSSGGGCHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred hhhhccchHHHHHHHHhccCchhhhhhHHhhcCCCCCHHHHHHHhcc--cCCccchHHHHHHHHHhcccccchhhhhhhH
Confidence 0011111 0000000000 000001111000 000000000000111100000 0122
Q ss_pred hccCC-CCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEe--CCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 275 QELLP-YVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQF--SSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 275 ~~~l~-~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
...+. ++++|+|+|+|++|.++| +..+.+.+.+|+++++++ +++||++++ +|+++++.|.+||.+.
T Consensus 241 ~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~ip~~~~~~i~~~~~GH~~~~-~p~~~~~~i~~Fl~~~ 309 (310)
T 1b6g_A 241 ISFWQNDWNGQTFMAIGMKDKLLG-PDVMYPMKALINGCPEPLEIADAGHFVQE-FGEQVAREALKHFAET 309 (310)
T ss_dssp HHHHHHTCCSEEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEETTCCSCGGG-GHHHHHHHHHHHHHHT
T ss_pred hhhhhccccCceEEEeccCcchhh-hHHHHHHHhcccccceeeecCCcccchhh-ChHHHHHHHHHHHhcc
Confidence 34566 899999999999999999 888999999999988877 999999999 9999999999999764
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=248.98 Aligned_cols=247 Identities=20% Similarity=0.265 Sum_probs=171.5
Q ss_pred eEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC
Q psy4974 76 FFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF 155 (345)
Q Consensus 76 ~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~ 155 (345)
++..+|.+++|...|+++ +|||+||++++. ..|..+++.|.++||+|+++|+|| ||.|+.+...+
T Consensus 3 ~~~~~g~~l~y~~~G~g~-~vvllHG~~~~~-~~w~~~~~~l~~~g~~vi~~D~~G-------------~G~S~~~~~~~ 67 (271)
T 3ia2_A 3 FVAKDGTQIYFKDWGSGK-PVLFSHGWLLDA-DMWEYQMEYLSSRGYRTIAFDRRG-------------FGRSDQPWTGN 67 (271)
T ss_dssp EECTTSCEEEEEEESSSS-EEEEECCTTCCG-GGGHHHHHHHHTTTCEEEEECCTT-------------STTSCCCSSCC
T ss_pred EEcCCCCEEEEEccCCCC-eEEEECCCCCcH-HHHHHHHHHHHhCCceEEEecCCC-------------CccCCCCCCCC
Confidence 455699999999999774 899999999995 999999999998899999999999 99998765555
Q ss_pred CCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHh-CCcccceeeEeccCCCCCc--------hhHHHHHHh
Q psy4974 156 VPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMK-YPHMVHKLVIWGTKSFLTI--------DNVRVFEGM 226 (345)
Q Consensus 156 ~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~--------~~~~~~~~~ 226 (345)
+++++++++.++++.++.++++|+||||||.+++.+++. .|++|+++|++++...... .....+...
T Consensus 68 ----~~~~~a~d~~~~l~~l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (271)
T 3ia2_A 68 ----DYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARF 143 (271)
T ss_dssp ----SHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHhCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHH
Confidence 678889999999999999999999999999866665555 5899999999987543210 001111111
Q ss_pred Hhc-cCCChhhHHHH-HHHcccC--CchhhhhHHHH--------HHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCC
Q psy4974 227 RRL-SNWSPMARSEV-LKAYDND--VNYITGIFNQY--------VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDV 294 (345)
Q Consensus 227 ~~~-~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~ 294 (345)
... ........... ...+... ........... ..............+....+.++++|+|+|+|++|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~ 223 (271)
T 3ia2_A 144 KTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQ 223 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTCS
T ss_pred HHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCCC
Confidence 000 00000000000 0011100 00000000000 001111111111223355678899999999999999
Q ss_pred CCChHH-HHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 295 MVSTQQ-VQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 295 ~v~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
++|.+. .+.+.+.++++++.+++++||+++.|+|+++++.|.+||++
T Consensus 224 ~~p~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 224 IVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp SSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred cCChHHHHHHHHHhCCCceEEEEcCCCCcccccCHHHHHHHHHHHhhC
Confidence 999887 55566778999999999999999999999999999999963
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=249.87 Aligned_cols=245 Identities=15% Similarity=0.189 Sum_probs=175.2
Q ss_pred eeeEEEcCceEEEEEcCC-CCceEEEEcCcCCCchh-hHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC-
Q psy4974 74 EGFFSIKGCDIRFIKYGS-GAQVLFFTYGVLGEIRN-SFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP- 150 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~- 150 (345)
..++..+|.+++|...|+ ..|+|||+||++++. . .|..+++.|++ ||+|+++|+|| ||.|+.
T Consensus 5 ~~~~~~~g~~l~~~~~G~~~~~~vvllHG~~~~~-~~~w~~~~~~L~~-~~~vi~~Dl~G-------------~G~S~~~ 69 (286)
T 2yys_A 5 IGYVPVGEAELYVEDVGPVEGPALFVLHGGPGGN-AYVLREGLQDYLE-GFRVVYFDQRG-------------SGRSLEL 69 (286)
T ss_dssp EEEEECSSCEEEEEEESCTTSCEEEEECCTTTCC-SHHHHHHHGGGCT-TSEEEEECCTT-------------STTSCCC
T ss_pred eeEEeECCEEEEEEeecCCCCCEEEEECCCCCcc-hhHHHHHHHHhcC-CCEEEEECCCC-------------CCCCCCC
Confidence 567788999999999984 346999999999995 8 89999999965 69999999999 999986
Q ss_pred CCC--CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHH-----
Q psy4974 151 KGR--SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVF----- 223 (345)
Q Consensus 151 ~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~----- 223 (345)
+.. .+ +++++++++.+++++++.++++|+||||||.+|+.+|.++|+ |+++|++++...........+
T Consensus 70 ~~~~~~~----~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~ 144 (286)
T 2yys_A 70 PQDPRLF----TVDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGL 144 (286)
T ss_dssp CSCGGGC----CHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTC
T ss_pred ccCcccC----cHHHHHHHHHHHHHHhCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhcc
Confidence 543 34 788899999999999999999999999999999999999999 999999998752111000110
Q ss_pred -------HHhHhc-cCCChhhHHHHHHHc--ccCCchhhhhHHHHHH-----HHHH--HHHhhCchhhhccCCCCCCCEE
Q psy4974 224 -------EGMRRL-SNWSPMARSEVLKAY--DNDVNYITGIFNQYVD-----MVNL--IFKSYGRNVYQELLPYVDVPVL 286 (345)
Q Consensus 224 -------~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~l~~i~~Pvl 286 (345)
..+... ..... ........ ................ .... .+......+....+.++++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 222 (286)
T 2yys_A 145 APLPDPEENLKEALKREEP--KALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPLY 222 (286)
T ss_dssp CCCSCHHHHHHHHHHHSCH--HHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCCSSCEE
T ss_pred ccchhHHHHHHHHhccCCh--HHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhhcCCCEE
Confidence 000000 00000 00000000 0000000000000000 0000 1111122234566888999999
Q ss_pred EEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 287 VFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 287 ~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+|+|++|.+++.+ ++.+.+ ++++++++++++||++++|+|+++++.|.+||.+.
T Consensus 223 vi~G~~D~~~~~~-~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 223 VLVGERDGTSYPY-AEEVAS-RLRAPIRVLPEAGHYLWIDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp EEEETTCTTTTTT-HHHHHH-HHTCCEEEETTCCSSHHHHCHHHHHHHHHHHHHTT
T ss_pred EEEeCCCCcCCHh-HHHHHh-CCCCCEEEeCCCCCCcChhhHHHHHHHHHHHHHhh
Confidence 9999999999998 999999 99999999999999999999999999999999864
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=248.49 Aligned_cols=245 Identities=15% Similarity=0.205 Sum_probs=175.8
Q ss_pred EEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 78 SIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 78 ~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
..+|.+++|...|+++ +|||+||++++. ..|..+++.|+++||+|+++|+|| ||.|+.+...+
T Consensus 9 ~~~g~~l~y~~~g~g~-pvvllHG~~~~~-~~~~~~~~~L~~~g~~vi~~D~~G-------------~G~S~~~~~~~-- 71 (277)
T 1brt_A 9 NSTSIDLYYEDHGTGQ-PVVLIHGFPLSG-HSWERQSAALLDAGYRVITYDRRG-------------FGQSSQPTTGY-- 71 (277)
T ss_dssp TTEEEEEEEEEECSSS-EEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTT-------------STTSCCCSSCC--
T ss_pred cCCCcEEEEEEcCCCC-eEEEECCCCCcH-HHHHHHHHHHhhCCCEEEEeCCCC-------------CCCCCCCCCCc--
Confidence 4578899999998765 799999999995 999999999998899999999999 99998766555
Q ss_pred ccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCc-ccceeeEeccCCCCCch---------hHHHHHHhH
Q psy4974 158 FQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH-MVHKLVIWGTKSFLTID---------NVRVFEGMR 227 (345)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~---------~~~~~~~~~ 227 (345)
+++++++++.+++++++.++++|+||||||.+|+.+|.++|+ +|+++|++++....... ....+..+.
T Consensus 72 --~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (277)
T 1brt_A 72 --DYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIV 149 (277)
T ss_dssp --SHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHH
T ss_pred --cHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHH
Confidence 788889999999999999999999999999999999999998 99999999975332100 011111111
Q ss_pred h-ccCCC-hhhHHHHHHHccc----CCchhhhhHHHHHHHH-----HHHHHhhC--chhhhccCCCCCCCEEEEEeCCCC
Q psy4974 228 R-LSNWS-PMARSEVLKAYDN----DVNYITGIFNQYVDMV-----NLIFKSYG--RNVYQELLPYVDVPVLVFHSADDV 294 (345)
Q Consensus 228 ~-~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~l~~i~~Pvl~i~G~~D~ 294 (345)
. ..... ..........+.. ...........+.... ........ ..+....+.++++|+|+|+|++|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 229 (277)
T 1brt_A 150 AAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDR 229 (277)
T ss_dssp HHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCS
T ss_pred HHHhcCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCc
Confidence 0 00000 0001111111111 0001111111111110 01111110 223344567889999999999999
Q ss_pred CCChHHH-HHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 295 MVSTQQV-QSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 295 ~v~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
++|.+.. +.+.+.+|++++++++++||++++|+|+++++.|.+||++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 230 TLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp SSCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred cCChHHHHHHHHHHCCCCcEEEeCCCCcchhhhCHHHHHHHHHHHHhC
Confidence 9998887 8999999999999999999999999999999999999963
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=247.65 Aligned_cols=246 Identities=16% Similarity=0.158 Sum_probs=172.9
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
..++.++|.+++|...|++ |+|||+||++++. ..|..+++.|+++ |+|+++|+|| ||.|+.+ .
T Consensus 11 ~~~~~~~g~~l~y~~~G~g-~~lvllHG~~~~~-~~w~~~~~~L~~~-~~via~Dl~G-------------~G~S~~~-~ 73 (294)
T 1ehy_A 11 HYEVQLPDVKIHYVREGAG-PTLLLLHGWPGFW-WEWSKVIGPLAEH-YDVIVPDLRG-------------FGDSEKP-D 73 (294)
T ss_dssp EEEEECSSCEEEEEEEECS-SEEEEECCSSCCG-GGGHHHHHHHHTT-SEEEEECCTT-------------STTSCCC-C
T ss_pred eeEEEECCEEEEEEEcCCC-CEEEEECCCCcch-hhHHHHHHHHhhc-CEEEecCCCC-------------CCCCCCC-c
Confidence 5677889999999999865 5999999999995 9999999999988 9999999999 9999876 4
Q ss_pred -----CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC-CCchhHH------
Q psy4974 154 -----SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF-LTIDNVR------ 221 (345)
Q Consensus 154 -----~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~-~~~~~~~------ 221 (345)
.| +++++++++.++++++++++++|+||||||.+|+.+|.++|++|+++|++++... .......
T Consensus 74 ~~~~~~~----~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 149 (294)
T 1ehy_A 74 LNDLSKY----SLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHE 149 (294)
T ss_dssp TTCGGGG----CHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------C
T ss_pred cccccCc----CHHHHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccC
Confidence 35 7888999999999999999999999999999999999999999999999997432 1110000
Q ss_pred -H---HHH--hH-hccCCChh-hHHHHHHHcc----cCCchhhhhHHHHHHH---------HHHHHHhhCchhh----hc
Q psy4974 222 -V---FEG--MR-RLSNWSPM-ARSEVLKAYD----NDVNYITGIFNQYVDM---------VNLIFKSYGRNVY----QE 276 (345)
Q Consensus 222 -~---~~~--~~-~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~----~~ 276 (345)
+ +.. +. ........ ........+. ............+... ....+........ ..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (294)
T 1ehy_A 150 SWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDL 229 (294)
T ss_dssp CHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTG
T ss_pred ceEEEecCcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCc
Confidence 0 000 00 00000000 0111111111 0000111111111111 0111111111110 11
Q ss_pred cCCCCCCCEEEEEeCCCCCCC-hHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 277 LLPYVDVPVLVFHSADDVMVS-TQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 277 ~l~~i~~Pvl~i~G~~D~~v~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.+.++++|+|+|+|++|.++| ....+.+.+.+|++++++++++||++++|+|+++++.|.+||+
T Consensus 230 ~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 294 (294)
T 1ehy_A 230 DHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 294 (294)
T ss_dssp GGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred ccCcCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCceEEeCCCCCChhhhCHHHHHHHHHHHhC
Confidence 234789999999999999998 4677888888999999999999999999999999999999973
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=247.34 Aligned_cols=238 Identities=18% Similarity=0.257 Sum_probs=171.1
Q ss_pred EEEEEcCC---CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC-CCCCCcc
Q psy4974 84 IRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG-RSFVPFQ 159 (345)
Q Consensus 84 l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~-~~~~~~~ 159 (345)
|+|...|+ +.|+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+.+. ..|
T Consensus 3 i~y~~~g~~~~~~~~vvllHG~~~~~-~~w~~~~~~L~~~-~~vi~~Dl~G-------------~G~S~~~~~~~~---- 63 (268)
T 3v48_A 3 MKLSLSPPPYADAPVVVLISGLGGSG-SYWLPQLAVLEQE-YQVVCYDQRG-------------TGNNPDTLAEDY---- 63 (268)
T ss_dssp SCCEECCCSSTTCCEEEEECCTTCCG-GGGHHHHHHHHTT-SEEEECCCTT-------------BTTBCCCCCTTC----
T ss_pred eEEEecCCCCCCCCEEEEeCCCCccH-HHHHHHHHHHhhc-CeEEEECCCC-------------CCCCCCCccccC----
Confidence 66777764 347999999999995 9999999999876 9999999999 99997653 334
Q ss_pred chHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccC---CChhh
Q psy4974 160 YIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSN---WSPMA 236 (345)
Q Consensus 160 ~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 236 (345)
+++++++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++...........+........ .....
T Consensus 64 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (268)
T 3v48_A 64 SIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWV 143 (268)
T ss_dssp CHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhh
Confidence 788899999999999999999999999999999999999999999999999866543322221111100000 00000
Q ss_pred HHHHHHHcccCCchhhhhHHHH-------------HHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHH
Q psy4974 237 RSEVLKAYDNDVNYITGIFNQY-------------VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQS 303 (345)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~ 303 (345)
.......+... +........ ...+...+......+....+.++++|+|+|+|++|.++|.+.++.
T Consensus 144 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~ 221 (268)
T 3v48_A 144 EAQPLFLYPAD--WMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSE 221 (268)
T ss_dssp HHHHHHHSCHH--HHHTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHH
T ss_pred hhhhhhcCchh--hhhcccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHH
Confidence 00000000000 000000000 001111111111223355677899999999999999999999999
Q ss_pred HHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 304 LLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 304 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+.+.+|++++++++++||++++|+|+++++.|.+||.+.
T Consensus 222 l~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 260 (268)
T 3v48_A 222 LHAALPDSQKMVMPYGGHACNVTDPETFNALLLNGLASL 260 (268)
T ss_dssp HHHHCSSEEEEEESSCCTTHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHhCCcCeEEEeCCCCcchhhcCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999864
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-34 Score=248.51 Aligned_cols=248 Identities=18% Similarity=0.276 Sum_probs=177.0
Q ss_pred eEEEcC-ceEEEEEcCCCC-ceEEEEcCcC---CCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 76 FFSIKG-CDIRFIKYGSGA-QVLFFTYGVL---GEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 76 ~~~~~g-~~l~~~~~g~~~-p~vv~lHG~~---~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
++.++| .+++|...|+++ |+|||+||++ ++ ...|..+++.|++. |+|+++|+|| ||.|+.
T Consensus 17 ~~~~~g~~~l~y~~~G~g~~~~vvllHG~~pg~~~-~~~w~~~~~~L~~~-~~via~Dl~G-------------~G~S~~ 81 (291)
T 2wue_A 17 EVDVDGPLKLHYHEAGVGNDQTVVLLHGGGPGAAS-WTNFSRNIAVLARH-FHVLAVDQPG-------------YGHSDK 81 (291)
T ss_dssp EEESSSEEEEEEEEECTTCSSEEEEECCCCTTCCH-HHHTTTTHHHHTTT-SEEEEECCTT-------------STTSCC
T ss_pred EEEeCCcEEEEEEecCCCCCCcEEEECCCCCccch-HHHHHHHHHHHHhc-CEEEEECCCC-------------CCCCCC
Confidence 678899 999999998764 4899999997 56 58899999999887 9999999999 999987
Q ss_pred CCC-CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc--h--hHHHHHH
Q psy4974 151 KGR-SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI--D--NVRVFEG 225 (345)
Q Consensus 151 ~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~--~~~~~~~ 225 (345)
+.. .+ +++++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...... . .......
T Consensus 82 ~~~~~~----~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 157 (291)
T 2wue_A 82 RAEHGQ----FNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKR 157 (291)
T ss_dssp CSCCSS----HHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHH
T ss_pred CCCCCc----CHHHHHHHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHH
Confidence 654 44 7888899999999999999999999999999999999999999999999998653210 0 0011111
Q ss_pred hHhc-cCCChhhHHHHHHHcccCCchh-hhhHHHHH------HHHHHHHH---hhC---c--hhhhccCCCCCCCEEEEE
Q psy4974 226 MRRL-SNWSPMARSEVLKAYDNDVNYI-TGIFNQYV------DMVNLIFK---SYG---R--NVYQELLPYVDVPVLVFH 289 (345)
Q Consensus 226 ~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~---~~~---~--~~~~~~l~~i~~Pvl~i~ 289 (345)
+... ..............+....... ........ ......+. ... . ......+.++++|+|+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~ 237 (291)
T 2wue_A 158 LSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIW 237 (291)
T ss_dssp HHHHHHSCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEE
T ss_pred HHHHhccCCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEe
Confidence 1100 0000011111111110000000 00111000 01111111 111 1 111256778999999999
Q ss_pred eCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 290 SADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 290 G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
|++|.++|.+.++.+++.+|++++++++++||++++|+|+++++.|.+||++.
T Consensus 238 G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 290 (291)
T 2wue_A 238 GREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGGG 290 (291)
T ss_dssp ETTCSSSCGGGGHHHHHHSTTEEEEEESSCCSCHHHHTHHHHHHHHHHHTTC-
T ss_pred cCCCCCCCHHHHHHHHHHCCCCeEEEeCCCCCChhhhCHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999753
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=251.36 Aligned_cols=245 Identities=16% Similarity=0.206 Sum_probs=172.8
Q ss_pred EEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 78 SIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 78 ~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
..+|..++|...|++ ++|||+||++++. ..|..+++.|.++||+|+++|+|| ||.|+.+...+
T Consensus 13 ~~~g~~l~y~~~G~g-~~vvllHG~~~~~-~~w~~~~~~l~~~g~~vi~~D~~G-------------~G~S~~~~~~~-- 75 (281)
T 3fob_A 13 NQAPIEIYYEDHGTG-KPVVLIHGWPLSG-RSWEYQVPALVEAGYRVITYDRRG-------------FGKSSQPWEGY-- 75 (281)
T ss_dssp TTEEEEEEEEEESSS-EEEEEECCTTCCG-GGGTTTHHHHHHTTEEEEEECCTT-------------STTSCCCSSCC--
T ss_pred CCCceEEEEEECCCC-CeEEEECCCCCcH-HHHHHHHHHHHhCCCEEEEeCCCC-------------CCCCCCCcccc--
Confidence 347899999999987 5899999999995 999999999988889999999999 99998776656
Q ss_pred ccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHh-CCcccceeeEeccCCCCCc------h---hHHHHHHhH
Q psy4974 158 FQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMK-YPHMVHKLVIWGTKSFLTI------D---NVRVFEGMR 227 (345)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~------~---~~~~~~~~~ 227 (345)
+++++++++.++++.++.++++|+||||||.+++.++.. .|++++++|++++...... . .......+.
T Consensus 76 --~~~~~a~dl~~ll~~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (281)
T 3fob_A 76 --EYDTFTSDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFK 153 (281)
T ss_dssp --SHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHcCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHH
Confidence 778889999999999999999999999999988776665 5899999999997532110 0 001111110
Q ss_pred hc-cC-CChhhHHHHHHHcccCC--chhhhhHHHH---------HHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCC
Q psy4974 228 RL-SN-WSPMARSEVLKAYDNDV--NYITGIFNQY---------VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDV 294 (345)
Q Consensus 228 ~~-~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~ 294 (345)
.. .. ...........++.... .........+ .......+......+....+.++++|+|+|+|++|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~ 233 (281)
T 3fob_A 154 SGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDA 233 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCS
T ss_pred HHhhhhHHHHHHHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecCCCC
Confidence 00 00 00000111111221110 0000000000 001111112222233456678899999999999999
Q ss_pred CCChHHH-HHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 295 MVSTQQV-QSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 295 ~v~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
++|.+.. +.+.+.+|++++++++++||+++.|+|+++++.|.+||++
T Consensus 234 ~~p~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 281 (281)
T 3fob_A 234 TVPFEYSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEALLLFLKD 281 (281)
T ss_dssp SSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHCC
T ss_pred CcCHHHHHHHHHHhCCCceEEEeCCCCCchhhhhHHHHHHHHHHHhhC
Confidence 9998865 7777889999999999999999999999999999999963
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=248.11 Aligned_cols=245 Identities=20% Similarity=0.224 Sum_probs=171.5
Q ss_pred EEcCceEEEEEcCC-CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 78 SIKGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 78 ~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
..+|.+++|..+|+ ..|+|||+||++++. ..|..+++.|+++||+|+++|+|| ||.|+.+...+
T Consensus 6 ~~~g~~l~y~~~g~~~~~~vvllHG~~~~~-~~w~~~~~~L~~~g~~vi~~D~~G-------------~G~S~~~~~~~- 70 (276)
T 1zoi_A 6 TKDGVQIFYKDWGPRDAPVIHFHHGWPLSA-DDWDAQLLFFLAHGYRVVAHDRRG-------------HGRSSQVWDGH- 70 (276)
T ss_dssp CTTSCEEEEEEESCTTSCEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTT-------------STTSCCCSSCC-
T ss_pred CCCCcEEEEEecCCCCCCeEEEECCCCcch-hHHHHHHHHHHhCCCEEEEecCCC-------------CCCCCCCCCCC-
Confidence 34899999999884 336899999999995 999999999998899999999999 99998665445
Q ss_pred CccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC-CcccceeeEeccCCCCCc--------hhHHHHHHhH
Q psy4974 157 PFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY-PHMVHKLVIWGTKSFLTI--------DNVRVFEGMR 227 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~--------~~~~~~~~~~ 227 (345)
+++++++++.+++++++.++++|+||||||.+|+.+|.++ |++|+++|++++...... .....+..+.
T Consensus 71 ---~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (276)
T 1zoi_A 71 ---DMDHYADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQ 147 (276)
T ss_dssp ---SHHHHHHHHHHHHHHHTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHH
Confidence 7888899999999999999999999999999999988887 999999999997542110 0001111111
Q ss_pred hc-cCCChhhHHHHHH--HcccC---CchhhhhHHHHHH--------HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCC
Q psy4974 228 RL-SNWSPMARSEVLK--AYDND---VNYITGIFNQYVD--------MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADD 293 (345)
Q Consensus 228 ~~-~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D 293 (345)
.. ..........+.. .+... ..........+.. ............+....+.++++|+|+|+|++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D 227 (276)
T 1zoi_A 148 AQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDD 227 (276)
T ss_dssp HHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETTC
T ss_pred HHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccccCCCEEEEEcCCC
Confidence 00 0000000000100 01100 0000111111110 011111111122234456678999999999999
Q ss_pred CCCChH-HHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 294 VMVSTQ-QVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 294 ~~v~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.++|.+ ..+.+.+.++++++++++++||++++++|+++++.|.+||+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 228 QIVPYENSGVLSAKLLPNGALKTYKGYPHGMPTTHADVINADLLAFIR 275 (276)
T ss_dssp SSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred cccChHHHHHHHHhhCCCceEEEcCCCCCchhhhCHHHHHHHHHHHhc
Confidence 999977 55667778899999999999999999999999999999995
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=244.46 Aligned_cols=249 Identities=16% Similarity=0.190 Sum_probs=177.1
Q ss_pred eeeEEEcCceEEEEEcC-CCCceEEEEcCcC---CCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYG-SGAQVLFFTYGVL---GEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g-~~~p~vv~lHG~~---~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
..+++++|..++|...| +++|+|||+||++ ++ ...|..+++.|++. |+|+++|+|| ||.|+
T Consensus 9 ~~~~~~~g~~l~y~~~g~~g~p~vvllHG~~~~~~~-~~~~~~~~~~L~~~-~~vi~~D~~G-------------~G~S~ 73 (285)
T 1c4x_A 9 EKRFPSGTLASHALVAGDPQSPAVVLLHGAGPGAHA-ASNWRPIIPDLAEN-FFVVAPDLIG-------------FGQSE 73 (285)
T ss_dssp EEEECCTTSCEEEEEESCTTSCEEEEECCCSTTCCH-HHHHGGGHHHHHTT-SEEEEECCTT-------------STTSC
T ss_pred ceEEEECCEEEEEEecCCCCCCEEEEEeCCCCCCcc-hhhHHHHHHHHhhC-cEEEEecCCC-------------CCCCC
Confidence 56778899999999998 6655599999997 55 58899999999887 9999999999 99997
Q ss_pred CCCC-CCCCccchHHH----HHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHH
Q psy4974 150 PKGR-SFVPFQYIEED----VDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFE 224 (345)
Q Consensus 150 ~~~~-~~~~~~~~~~~----~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 224 (345)
.+.. .+ +++++ ++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.............
T Consensus 74 ~~~~~~~----~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 149 (285)
T 1c4x_A 74 YPETYPG----HIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELA 149 (285)
T ss_dssp CCSSCCS----SHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHH
T ss_pred CCCCccc----chhhhhhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHH
Confidence 6543 34 67788 999999999999999999999999999999999999999999999986542211011111
Q ss_pred HhHhc-cCCChhhHHHHHHHcccCCchh---hhhHHHH---------HHHHHHHH--HhhCc---hhhhccCCCCCCCEE
Q psy4974 225 GMRRL-SNWSPMARSEVLKAYDNDVNYI---TGIFNQY---------VDMVNLIF--KSYGR---NVYQELLPYVDVPVL 286 (345)
Q Consensus 225 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---------~~~~~~~~--~~~~~---~~~~~~l~~i~~Pvl 286 (345)
.+... ..............+....... ....... ...+...+ ..... ......+.++++|+|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 229 (285)
T 1c4x_A 150 RLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVL 229 (285)
T ss_dssp HHHTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEE
T ss_pred HHHHHhccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEE
Confidence 11111 0000111111111111110001 1111110 11111111 00000 012345678999999
Q ss_pred EEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 287 VFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 287 ~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+|+|++|.++|.+..+.+.+.++++++++++++||+++.|+|+++++.|.+||.+
T Consensus 230 ii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 230 VFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp EEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred EEEeCCCeeeCHHHHHHHHHhCCCceEEEeCCCCcchhhcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999975
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-34 Score=243.36 Aligned_cols=237 Identities=15% Similarity=0.175 Sum_probs=167.4
Q ss_pred eEEEEEcCC----CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCc
Q psy4974 83 DIRFIKYGS----GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPF 158 (345)
Q Consensus 83 ~l~~~~~g~----~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~ 158 (345)
+++|...|+ +.|+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+.+. .+
T Consensus 2 ~l~y~~~G~~~~~~~~~vvllHG~~~~~-~~w~~~~~~L~~~-~~via~Dl~G-------------~G~S~~~~-~~--- 62 (255)
T 3bf7_A 2 KLNIRAQTAQNQHNNSPIVLVHGLFGSL-DNLGVLARDLVND-HNIIQVDVRN-------------HGLSPREP-VM--- 62 (255)
T ss_dssp CCCEEEECCSSCCCCCCEEEECCTTCCT-TTTHHHHHHHTTT-SCEEEECCTT-------------STTSCCCS-CC---
T ss_pred ceeeeecCccccCCCCCEEEEcCCcccH-hHHHHHHHHHHhh-CcEEEecCCC-------------CCCCCCCC-Cc---
Confidence 467888884 447999999999995 9999999999987 9999999999 99997653 34
Q ss_pred cchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc-h-hHHHHHHhHhccCCChhh
Q psy4974 159 QYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI-D-NVRVFEGMRRLSNWSPMA 236 (345)
Q Consensus 159 ~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 236 (345)
+++++++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.+.... . ....+..+..........
T Consensus 63 -~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (255)
T 3bf7_A 63 -NYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQT 141 (255)
T ss_dssp -CHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCS
T ss_pred -CHHHHHHHHHHHHHHcCCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhcccccccc
Confidence 6788899999999999999999999999999999999999999999999976432211 1 111111111110000000
Q ss_pred HHHHHHHcccCC--chhhhh---------HHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHH
Q psy4974 237 RSEVLKAYDNDV--NYITGI---------FNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLL 305 (345)
Q Consensus 237 ~~~~~~~~~~~~--~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~ 305 (345)
+......+.... ...... +......+...+..... ...+.++++|+|+|+|++|.+++.+..+.+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~ 218 (255)
T 3bf7_A 142 RQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVG---WEKIPAWDHPALFIPGGNSPYVSEQYRDDLL 218 (255)
T ss_dssp HHHHHHHHTTTCCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHHC---CCCCCCCCSCEEEECBTTCSTTCGGGHHHHH
T ss_pred HHHHHHHHhhhcchhHHHHHHHHhccCCceeecHHHHHhhhhhccc---cccccccCCCeEEEECCCCCCCCHHHHHHHH
Confidence 011111111000 000000 00001111111111100 1346789999999999999999999999999
Q ss_pred hhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 306 NQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 306 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+.++++++++++++||+++.|+|+++++.|.+||+++
T Consensus 219 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 219 AQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLNDH 255 (255)
T ss_dssp HHCTTEEECCBTTCCSCHHHHCHHHHHHHHHHHHHTC
T ss_pred HHCCCCeEEEeCCCCCccccCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999764
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=244.84 Aligned_cols=248 Identities=13% Similarity=0.151 Sum_probs=174.5
Q ss_pred eeeeEEEcCceEEEEEcCC-CCceEEEEcCcCCCchhhHHH-HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 73 TEGFFSIKGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKK-QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~-~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
++.+++.+|.+++|...|+ +.|+|||+||++++. ..|.. +++.|+++||+|+++|+|| ||.|+.
T Consensus 2 ~~~~~~~~g~~l~y~~~G~~~~~~vvllHG~~~~~-~~w~~~~~~~L~~~G~~vi~~D~rG-------------~G~S~~ 67 (298)
T 1q0r_A 2 SERIVPSGDVELWSDDFGDPADPALLLVMGGNLSA-LGWPDEFARRLADGGLHVIRYDHRD-------------TGRSTT 67 (298)
T ss_dssp CEEEEEETTEEEEEEEESCTTSCEEEEECCTTCCG-GGSCHHHHHHHHTTTCEEEEECCTT-------------STTSCC
T ss_pred CCceeccCCeEEEEEeccCCCCCeEEEEcCCCCCc-cchHHHHHHHHHhCCCEEEeeCCCC-------------CCCCCC
Confidence 4677889999999999984 346999999999995 89977 5599999899999999999 999986
Q ss_pred --C-CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCC-CCCch--------
Q psy4974 151 --K-GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS-FLTID-------- 218 (345)
Q Consensus 151 --~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~-~~~~~-------- 218 (345)
+ ...| +++++++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.. .....
T Consensus 68 ~~~~~~~~----~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 143 (298)
T 1q0r_A 68 RDFAAHPY----GFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMR 143 (298)
T ss_dssp CCTTTSCC----CHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHH
T ss_pred CCCCcCCc----CHHHHHHHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhh
Confidence 2 2234 788899999999999999999999999999999999999999999999999865 21000
Q ss_pred -----------hHHHHHHhHhcc--CCC-hhhHHHHH---HHc-ccCCchhhhhHHHHHHH-HHHH-------HHh---h
Q psy4974 219 -----------NVRVFEGMRRLS--NWS-PMARSEVL---KAY-DNDVNYITGIFNQYVDM-VNLI-------FKS---Y 269 (345)
Q Consensus 219 -----------~~~~~~~~~~~~--~~~-~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~-~~~~-------~~~---~ 269 (345)
.......+.... ... ........ ..+ .............+... +... ... .
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (298)
T 1q0r_A 144 GEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLT 223 (298)
T ss_dssp TCCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCC
T ss_pred hhhhhcccccccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhh
Confidence 001111111100 000 00000000 001 00000001111111111 1100 000 0
Q ss_pred Cchhhhcc-CCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 270 GRNVYQEL-LPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 270 ~~~~~~~~-l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
...+.... +.++++|+|+|+|++|.++|.+..+.+++.+|++++++++++|| +.|+++++.|.+||.+.
T Consensus 224 ~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH----e~p~~~~~~i~~fl~~~ 293 (298)
T 1q0r_A 224 LPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGH----ALPSSVHGPLAEVILAH 293 (298)
T ss_dssp CCCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTTEEEEEETTCCS----SCCGGGHHHHHHHHHHH
T ss_pred cCcccccccccccCCCEEEEEeCCCccCCHHHHHHHHHhCCCCEEEEcCCCCC----CCcHHHHHHHHHHHHHH
Confidence 11123445 77899999999999999999999999999999999999999999 77999999999999765
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=245.09 Aligned_cols=248 Identities=13% Similarity=0.114 Sum_probs=171.5
Q ss_pred eeeEEEcCceEEEEEc--CCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKY--GSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~--g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
..++.++|.+++|... |++.|+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+.+
T Consensus 6 ~~~~~~~g~~l~y~~~~~G~~~p~vvllHG~~~~~-~~w~~~~~~L~~~-~rvia~DlrG-------------hG~S~~~ 70 (276)
T 2wj6_A 6 LHETLVFDNKLSYIDNQRDTDGPAILLLPGWCHDH-RVYKYLIQELDAD-FRVIVPNWRG-------------HGLSPSE 70 (276)
T ss_dssp EEEEEETTEEEEEEECCCCCSSCEEEEECCTTCCG-GGGHHHHHHHTTT-SCEEEECCTT-------------CSSSCCC
T ss_pred ceEEeeCCeEEEEEEecCCCCCCeEEEECCCCCcH-HHHHHHHHHHhcC-CEEEEeCCCC-------------CCCCCCC
Confidence 4567789999999999 87668999999999995 9999999999876 9999999999 9999877
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC-CcccceeeEeccCCCCCchh-HHHHHHhHhc
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY-PHMVHKLVIWGTKSFLTIDN-VRVFEGMRRL 229 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~ 229 (345)
...| +++++++++.++++++++++++|+||||||.+|+.+|.++ |++|+++|++++........ ..........
T Consensus 71 ~~~~----~~~~~a~dl~~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~ 146 (276)
T 2wj6_A 71 VPDF----GYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDP 146 (276)
T ss_dssp CCCC----CHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHHCT
T ss_pred CCCC----CHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhccCc
Confidence 5556 7888999999999999999999999999999999999999 99999999999754322111 1111111000
Q ss_pred cCCChhhHHHHHHHcccCC-c---------hhh---hhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCC
Q psy4974 230 SNWSPMARSEVLKAYDNDV-N---------YIT---GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMV 296 (345)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~-~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v 296 (345)
..+..........+..... . ... ..+......+...+.... .....+..+++|+++++|..|...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~i~~P~lv~~~~~~~~~ 224 (276)
T 2wj6_A 147 ERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNG--SPMQMMANLTKTRPIRHIFSQPTE 224 (276)
T ss_dssp TTHHHHHHHHHHHHHTTBCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHC--CHHHHHHTCSSCCCEEEEECCSCS
T ss_pred chHHHHHHHHHHHhhcccchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhcc--chhhHHhhcCCCceEEEEecCccc
Confidence 0000000001111111000 0 000 001111111111111111 112345678899999887443322
Q ss_pred C--hHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 297 S--TQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 297 ~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+ ....+.+++.+|++++++++++||++++|+|+++++.|.+||.+.
T Consensus 225 ~~~~~~~~~~~~~~p~a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 225 PEYEKINSDFAEQHPWFSYAKLGGPTHFPAIDVPDRAAVHIREFATAI 272 (276)
T ss_dssp HHHHHHHHHHHHHCTTEEEEECCCSSSCHHHHSHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhhCCCeEEEEeCCCCCcccccCHHHHHHHHHHHHhhc
Confidence 2 345567888899999999999999999999999999999999764
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=254.73 Aligned_cols=249 Identities=16% Similarity=0.154 Sum_probs=176.0
Q ss_pred eeeEEEcCceEEEEEcCCCC-ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGA-QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~-p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
..++.++|..++|...|+++ |+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+.+.
T Consensus 9 ~~~~~~~g~~l~y~~~G~g~~~pvvllHG~~~~~-~~w~~~~~~L~~~-~~via~Dl~G-------------~G~S~~~~ 73 (316)
T 3afi_E 9 IRRAPVLGSSMAYRETGAQDAPVVLFLHGNPTSS-HIWRNILPLVSPV-AHCIAPDLIG-------------FGQSGKPD 73 (316)
T ss_dssp -CEEEETTEEEEEEEESCTTSCEEEEECCTTCCG-GGGTTTHHHHTTT-SEEEEECCTT-------------STTSCCCS
T ss_pred ceeEEeCCEEEEEEEeCCCCCCeEEEECCCCCch-HHHHHHHHHHhhC-CEEEEECCCC-------------CCCCCCCC
Confidence 56778899999999998763 3899999999995 9999999999887 9999999999 99998765
Q ss_pred CCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC---Cchh----------
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL---TIDN---------- 219 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~---~~~~---------- 219 (345)
..| +++++++++.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.... ....
T Consensus 74 ~~~----~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 149 (316)
T 3afi_E 74 IAY----RFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDH 149 (316)
T ss_dssp SCC----CHHHHHHHHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHH
T ss_pred CCC----CHHHHHHHHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhcccccc
Confidence 555 78889999999999999999999999999999999999999999999999974321 0000
Q ss_pred -HHHHHHhHhccCCChhhH-------HHHHHHccc-C-CchhhhhHHHHH---------HHHHHHHHhhC----------
Q psy4974 220 -VRVFEGMRRLSNWSPMAR-------SEVLKAYDN-D-VNYITGIFNQYV---------DMVNLIFKSYG---------- 270 (345)
Q Consensus 220 -~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~-~~~~~~~~~~~~---------~~~~~~~~~~~---------- 270 (345)
............ ..... ......+.. . ..........+. ......+....
T Consensus 150 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (316)
T 3afi_E 150 AEAARAVFRKFRT-PGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYE 228 (316)
T ss_dssp HHHHHHHHHHHTS-TTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHH
T ss_pred chhHHHHHHHhcC-CchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhh
Confidence 000000000000 00000 000000000 0 000000000000 00000000000
Q ss_pred -chhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 271 -RNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 271 -~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
.......+.++++|+|+|+|++|.++|.+..+.+.+.+|++++++++++||++++|+|+++++.|.+||++.
T Consensus 229 ~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 301 (316)
T 3afi_E 229 ALQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASLTRCALIRLGAGLHYLQEDHADAIGRSVAGWIAGI 301 (316)
T ss_dssp HHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSSSEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhccCCCeEEEecCCCCccCHHHHHHHHHhCCCCeEEEcCCCCCCchhhCHHHHHHHHHHHHhhc
Confidence 001123345689999999999999999999999999999999999999999999999999999999999864
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=251.52 Aligned_cols=255 Identities=17% Similarity=0.186 Sum_probs=177.0
Q ss_pred eeeeEEEcCceEEEEEcCC--C---CceEEEEcCcCCCchhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCC
Q psy4974 73 TEGFFSIKGCDIRFIKYGS--G---AQVLFFTYGVLGEIRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYG 146 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~g~--~---~p~vv~lHG~~~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G 146 (345)
++.++.++|.+++|...|+ + .++|||+||++++. ..|...+..|++ .||+|+++|+|| ||
T Consensus 29 ~~~~v~~~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~-~~w~~~~~~l~~~~~~~Via~D~rG-------------~G 94 (330)
T 3nwo_A 29 SSRTVPFGDHETWVQVTTPENAQPHALPLIVLHGGPGMA-HNYVANIAALADETGRTVIHYDQVG-------------CG 94 (330)
T ss_dssp CEEEEEETTEEEEEEEECCSSCCTTCCCEEEECCTTTCC-SGGGGGGGGHHHHHTCCEEEECCTT-------------ST
T ss_pred cceeEeecCcEEEEEEecCccCCCCCCcEEEECCCCCCc-hhHHHHHHHhccccCcEEEEECCCC-------------CC
Confidence 4778999999999999986 2 23899999999985 788888888875 579999999999 99
Q ss_pred CCCCCC-CCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHH
Q psy4974 147 QSLPKG-RSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEG 225 (345)
Q Consensus 147 ~s~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 225 (345)
.|+... ... ...+++.+++++.++++.+++++++|+||||||.+|+.+|.++|++|.++|+++++.............
T Consensus 95 ~S~~~~~~~~-~~~~~~~~a~dl~~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~ 173 (330)
T 3nwo_A 95 NSTHLPDAPA-DFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDL 173 (330)
T ss_dssp TSCCCTTSCG-GGCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHHH
T ss_pred CCCCCCCCcc-ccccHHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHHH
Confidence 997522 111 233678899999999999999999999999999999999999999999999999865432111000000
Q ss_pred hH--------------hccC-CChhhHHHHHHHcccC---CchhhhhHHHHHHHHH---HHHHh------------hCch
Q psy4974 226 MR--------------RLSN-WSPMARSEVLKAYDND---VNYITGIFNQYVDMVN---LIFKS------------YGRN 272 (345)
Q Consensus 226 ~~--------------~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~------------~~~~ 272 (345)
.. .... ..+........++... .......+......+. ..+.. ....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (330)
T 3nwo_A 174 RAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDW 253 (330)
T ss_dssp HHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGC
T ss_pred HHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhccccCC
Confidence 00 0000 0011111111111100 0000001111111100 00110 0111
Q ss_pred hhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 273 VYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 273 ~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+....+.++++|+|+|+|++|.++| ...+.+.+.+|++++++++++||++++|+|+++++.|.+||++..
T Consensus 254 ~~~~~l~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~ip~~~~~~i~~~gH~~~~e~p~~~~~~i~~FL~~~~ 323 (330)
T 3nwo_A 254 SVIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHIPDVRSHVFPGTSHCTHLEKPEEFRAVVAQFLHQHD 323 (330)
T ss_dssp BCGGGGGGCCSCEEEEEETTCSSCH-HHHHHHHHHCSSEEEEEETTCCTTHHHHSHHHHHHHHHHHHHHHH
T ss_pred chhhhcccCCCCeEEEeeCCCccCh-HHHHHHHHhCCCCcEEEeCCCCCchhhcCHHHHHHHHHHHHHhcc
Confidence 2345677889999999999999886 467888999999999999999999999999999999999998754
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-34 Score=245.06 Aligned_cols=245 Identities=20% Similarity=0.241 Sum_probs=170.4
Q ss_pred EEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 78 SIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 78 ~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
..+|.+++|..+|++ |+|||+||++++. ..|..+++.|+++||+|+++|+|| ||.|+.+...+
T Consensus 5 ~~~g~~l~y~~~g~~-~~vvllHG~~~~~-~~~~~~~~~L~~~g~~vi~~D~~G-------------~G~S~~~~~~~-- 67 (273)
T 1a8s_A 5 TRDGTQIYYKDWGSG-QPIVFSHGWPLNA-DSWESQMIFLAAQGYRVIAHDRRG-------------HGRSSQPWSGN-- 67 (273)
T ss_dssp CTTSCEEEEEEESCS-SEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTT-------------STTSCCCSSCC--
T ss_pred cCCCcEEEEEEcCCC-CEEEEECCCCCcH-HHHhhHHhhHhhCCcEEEEECCCC-------------CCCCCCCCCCC--
Confidence 448899999999866 5899999999995 999999999998899999999999 99998665444
Q ss_pred ccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC-CcccceeeEeccCCCCCc--------hhHHHHHHhHh
Q psy4974 158 FQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY-PHMVHKLVIWGTKSFLTI--------DNVRVFEGMRR 228 (345)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~ 228 (345)
+++++++++.++++.++.++++|+||||||.+|+.++.++ |++|+++|++++...... .....+..+..
T Consensus 68 --~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (273)
T 1a8s_A 68 --DMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQ 145 (273)
T ss_dssp --SHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHHH
Confidence 7888899999999999999999999999999999977776 899999999997532110 00011111100
Q ss_pred ccC-CChhhHHHHHH--HcccC---CchhhhhHHHHHH--------HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCC
Q psy4974 229 LSN-WSPMARSEVLK--AYDND---VNYITGIFNQYVD--------MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDV 294 (345)
Q Consensus 229 ~~~-~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~ 294 (345)
... ........+.. .+... ..........+.. ............+....+.++++|+|+++|++|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 225 (273)
T 1a8s_A 146 ASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQ 225 (273)
T ss_dssp HHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCS
T ss_pred HhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCCEEEEECCCCc
Confidence 000 00000000000 00000 0000111111100 0111111111122344567889999999999999
Q ss_pred CCChH-HHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 295 MVSTQ-QVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 295 ~v~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
++|.+ ..+.+.+.++++++++++++||+++.++|+++++.|.+||++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (273)
T 1a8s_A 226 VVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp SSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred cCChHHHHHHHHHhCCCcEEEEeCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 99987 556677778999999999999999999999999999999963
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=251.72 Aligned_cols=243 Identities=14% Similarity=0.125 Sum_probs=171.7
Q ss_pred eeeeEEEcC----ceEEEEEcCC-C-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCC
Q psy4974 73 TEGFFSIKG----CDIRFIKYGS-G-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYG 146 (345)
Q Consensus 73 ~~~~~~~~g----~~l~~~~~g~-~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G 146 (345)
+..+++++| .+++|...|+ . .|+|||+||++++. ..|..+++.|+++||+|+++|+|| ||
T Consensus 20 ~~~~~~~~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~-~~w~~~~~~L~~~g~rvia~Dl~G-------------~G 85 (297)
T 2xt0_A 20 APHYLEGLPGFEGLRMHYVDEGPRDAEHTFLCLHGEPSWS-FLYRKMLPVFTAAGGRVVAPDLFG-------------FG 85 (297)
T ss_dssp CCEEECCCTTCTTCCEEEEEESCTTCSCEEEEECCTTCCG-GGGTTTHHHHHHTTCEEEEECCTT-------------ST
T ss_pred ccEEEeccCCCCceEEEEEEccCCCCCCeEEEECCCCCcc-eeHHHHHHHHHhCCcEEEEeCCCC-------------CC
Confidence 366788888 9999999984 2 46999999999995 999999999998899999999999 99
Q ss_pred CCCCCCC--CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch-h--HH
Q psy4974 147 QSLPKGR--SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID-N--VR 221 (345)
Q Consensus 147 ~s~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~--~~ 221 (345)
.|+.+.. .| +++++++++.++++++++++++|+||||||.+|+.+|.++|++|+++|++++....... . ..
T Consensus 86 ~S~~~~~~~~~----~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~ 161 (297)
T 2xt0_A 86 RSDKPTDDAVY----TFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFE 161 (297)
T ss_dssp TSCEESCGGGC----CHHHHHHHHHHHHHHHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHH
T ss_pred CCCCCCCcccC----CHHHHHHHHHHHHHHhCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHH
Confidence 9986543 34 78889999999999999999999999999999999999999999999999985421111 0 01
Q ss_pred HHHHhHh-ccCCChhhHHHHHHHcccCCchhhhhHHHHH---------HHHHHHHHhhC----------chhhhccCC-C
Q psy4974 222 VFEGMRR-LSNWSPMARSEVLKAYDNDVNYITGIFNQYV---------DMVNLIFKSYG----------RNVYQELLP-Y 280 (345)
Q Consensus 222 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~----------~~~~~~~l~-~ 280 (345)
.+..... ....... ..+.... .. ........+. .....+..... ..+....+. +
T Consensus 162 ~~~~~~~~~~~~~~~--~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (297)
T 2xt0_A 162 SWRDFVANSPDLDVG--KLMQRAI-PG--ITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQ 236 (297)
T ss_dssp HHHHHHHTCTTCCHH--HHHHHHS-TT--CCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHT
T ss_pred HHHHHhhcccccchh--HHHhccC-cc--CCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhc
Confidence 1111100 0000000 0000000 00 0000000000 00000000000 011233456 7
Q ss_pred CCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEE--eCCCCCcccccChHHHHHHHHHHHH
Q psy4974 281 VDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQ--FSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 281 i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
+++|+|+|+|++|.++| ...+.+.+.+|++++.+ ++++||++++ +|+++++.|.+||+
T Consensus 237 i~~P~Lvi~G~~D~~~~-~~~~~~~~~~p~~~~~~~~~~~~GH~~~~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 237 WSGPTFMAVGAQDPVLG-PEVMGMLRQAIRGCPEPMIVEAGGHFVQE-HGEPIARAALAAFG 296 (297)
T ss_dssp CCSCEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEETTCCSSGGG-GCHHHHHHHHHHTT
T ss_pred cCCCeEEEEeCCCcccC-hHHHHHHHhCCCCeeEEeccCCCCcCccc-CHHHHHHHHHHHHh
Confidence 89999999999999999 88889999999887654 7899999999 99999999999985
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-33 Score=243.59 Aligned_cols=247 Identities=18% Similarity=0.262 Sum_probs=176.6
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcC---CCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVL---GEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~---~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
..+++++|.+++|...|++ |+|||+||++ ++ ...|..+++.|++. |+|+++|+|| ||.|+
T Consensus 18 ~~~~~~~g~~l~y~~~g~g-~~vvllHG~~~~~~~-~~~~~~~~~~L~~~-~~vi~~Dl~G-------------~G~S~- 80 (296)
T 1j1i_A 18 ERFVNAGGVETRYLEAGKG-QPVILIHGGGAGAES-EGNWRNVIPILARH-YRVIAMDMLG-------------FGKTA- 80 (296)
T ss_dssp EEEEEETTEEEEEEEECCS-SEEEEECCCSTTCCH-HHHHTTTHHHHTTT-SEEEEECCTT-------------STTSC-
T ss_pred ceEEEECCEEEEEEecCCC-CeEEEECCCCCCcch-HHHHHHHHHHHhhc-CEEEEECCCC-------------CCCCC-
Confidence 6778889999999999976 5899999997 55 48899999999887 9999999999 99998
Q ss_pred CCC-CCCCccchHHHHHHHHHHHHHhCC-ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHh
Q psy4974 151 KGR-SFVPFQYIEEDVDIAYELLKLLGV-CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRR 228 (345)
Q Consensus 151 ~~~-~~~~~~~~~~~~~~~~~~l~~~~~-~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 228 (345)
+.. .+ +++++++++.++++.++. ++++|+||||||.+|+.+|.++|++|+++|++++.......... ...+..
T Consensus 81 ~~~~~~----~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~ 155 (296)
T 1j1i_A 81 KPDIEY----TQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHED-LRPIIN 155 (296)
T ss_dssp CCSSCC----CHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC-----------
T ss_pred CCCCCC----CHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCch-HHHHhc
Confidence 433 44 678889999999999998 89999999999999999999999999999999986542211110 111100
Q ss_pred ccCCChhhHHHHHHHcccCCc----hhhhhHHHH-----HHHHHHHHHhh----CchhhhccCCCCCCCEEEEEeCCCCC
Q psy4974 229 LSNWSPMARSEVLKAYDNDVN----YITGIFNQY-----VDMVNLIFKSY----GRNVYQELLPYVDVPVLVFHSADDVM 295 (345)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~~~~~~~~~~~----~~~~~~~~l~~i~~Pvl~i~G~~D~~ 295 (345)
...........+......... .....+... ...+....... ........+.++++|+|+|+|++|.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~ 235 (296)
T 1j1i_A 156 YDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKV 235 (296)
T ss_dssp CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSS
T ss_pred ccCCchHHHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcc
Confidence 000000111111111111100 000000000 11111111110 11112345678899999999999999
Q ss_pred CChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 296 VSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 296 v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+|.+..+.+.+.++++++++++++||+++.|+|+++++.|.+||.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 282 (296)
T 1j1i_A 236 VPVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLSFLSLR 282 (296)
T ss_dssp SCHHHHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHCCCCEEEEECCCCCCchhcCHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999764
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=243.89 Aligned_cols=246 Identities=18% Similarity=0.213 Sum_probs=170.0
Q ss_pred EEcCceEEEEEcCC-CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 78 SIKGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 78 ~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
..+|.+++|..+|+ ..|+|||+||++++. ..|..+++.|+++||+|+++|+|| ||.|+.+...+
T Consensus 5 ~~~g~~l~y~~~g~~~~~~vvllHG~~~~~-~~w~~~~~~l~~~g~~vi~~D~~G-------------~G~S~~~~~~~- 69 (275)
T 1a88_A 5 TSDGTNIFYKDWGPRDGLPVVFHHGWPLSA-DDWDNQMLFFLSHGYRVIAHDRRG-------------HGRSDQPSTGH- 69 (275)
T ss_dssp CTTSCEEEEEEESCTTSCEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTT-------------STTSCCCSSCC-
T ss_pred ccCCCEEEEEEcCCCCCceEEEECCCCCch-hhHHHHHHHHHHCCceEEEEcCCc-------------CCCCCCCCCCC-
Confidence 34889999999884 336899999999995 999999999998899999999999 99998665445
Q ss_pred CccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC-CcccceeeEeccCCCCCc--------hhHHHHHHhH
Q psy4974 157 PFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY-PHMVHKLVIWGTKSFLTI--------DNVRVFEGMR 227 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~--------~~~~~~~~~~ 227 (345)
+++++++++.+++++++.++++|+||||||.+|+.++.++ |++|+++|++++...... .....+..+.
T Consensus 70 ---~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (275)
T 1a88_A 70 ---DMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFR 146 (275)
T ss_dssp ---SHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHcCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHH
Confidence 7888899999999999999999999999999999988776 999999999997542210 0001111110
Q ss_pred hc-cCCChhhHHHHHH--HcccC---CchhhhhHHHHHH--------HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCC
Q psy4974 228 RL-SNWSPMARSEVLK--AYDND---VNYITGIFNQYVD--------MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADD 293 (345)
Q Consensus 228 ~~-~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D 293 (345)
.. ..........+.. .+... ..........+.. ............+....+.++++|+|+|+|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 226 (275)
T 1a88_A 147 AALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDD 226 (275)
T ss_dssp HHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTC
T ss_pred HHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCEEEEecCCC
Confidence 00 0000000000000 00100 0000111111110 000111111111223445678999999999999
Q ss_pred CCCChH-HHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 294 VMVSTQ-QVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 294 ~~v~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
.++|.+ ..+.+.+.++++++++++++||+++.++|+++++.|.+||++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 227 QVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp SSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred ccCCcHHHHHHHHhhCCCcEEEEcCCCCccHHHhCHHHHHHHHHHHhhC
Confidence 999877 456677778999999999999999999999999999999963
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=243.00 Aligned_cols=244 Identities=18% Similarity=0.208 Sum_probs=170.4
Q ss_pred EEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 78 SIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 78 ~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
..+|.+++|..+|++ |+|||+||++++. ..|..+++.|.+.||+|+++|+|| ||.|+.+...+
T Consensus 5 ~~~g~~l~y~~~g~g-~~vvllHG~~~~~-~~w~~~~~~l~~~g~~vi~~D~~G-------------~G~S~~~~~~~-- 67 (274)
T 1a8q_A 5 TRDGVEIFYKDWGQG-RPVVFIHGWPLNG-DAWQDQLKAVVDAGYRGIAHDRRG-------------HGHSTPVWDGY-- 67 (274)
T ss_dssp CTTSCEEEEEEECSS-SEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTT-------------STTSCCCSSCC--
T ss_pred ccCCCEEEEEecCCC-ceEEEECCCcchH-HHHHHHHHHHHhCCCeEEEEcCCC-------------CCCCCCCCCCC--
Confidence 348899999999866 5899999999995 999999999998899999999999 99998665445
Q ss_pred ccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC-CcccceeeEeccCCCCCc--------hhHHHHHHhHh
Q psy4974 158 FQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY-PHMVHKLVIWGTKSFLTI--------DNVRVFEGMRR 228 (345)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~ 228 (345)
+++++++++.+++++++.++++|+||||||.+|+.+|.++ |++|+++|++++...... .....+..+..
T Consensus 68 --~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (274)
T 1a8q_A 68 --DFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKN 145 (274)
T ss_dssp --SHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHH
T ss_pred --cHHHHHHHHHHHHHHcCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHHH
Confidence 7888899999999999999999999999999999988776 899999999997532110 00011111100
Q ss_pred c-cCCChhhHHHHH-HHcccC---CchhhhhHHHHHH--------HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCC
Q psy4974 229 L-SNWSPMARSEVL-KAYDND---VNYITGIFNQYVD--------MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVM 295 (345)
Q Consensus 229 ~-~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~ 295 (345)
. ..........+. ..+... ..........+.. ............+....+.++++|+|+|+|++|.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 225 (274)
T 1a8q_A 146 GVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQV 225 (274)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSS
T ss_pred HhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEecCcCCC
Confidence 0 000000000000 111100 0000011111100 01111111111223455678999999999999999
Q ss_pred CChH-HHHHHHhhcCCcEEEEeCCCCCccccc--ChHHHHHHHHHHHH
Q psy4974 296 VSTQ-QVQSLLNQLKFCQYYQFSSGGHSCHIK--HGQVFNEISRNFIL 340 (345)
Q Consensus 296 v~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~ 340 (345)
+|.+ ..+.+.+.++++++++++++||+++.+ +|+++++.|.+||+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 226 VPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp SCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHhhCCCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 9987 456667778999999999999999999 99999999999996
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-33 Score=243.69 Aligned_cols=252 Identities=14% Similarity=0.150 Sum_probs=180.3
Q ss_pred cceeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 71 VFTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 71 ~~~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
.++..++.++|..++|...|++ |+|||+||++++. ..|..+++.|+++ |+|+++|+|| ||.|+.
T Consensus 9 ~~~~~~~~~~g~~l~~~~~g~~-~~vv~lHG~~~~~-~~~~~~~~~L~~~-~~vi~~D~~G-------------~G~S~~ 72 (301)
T 3kda_A 9 GFESAYREVDGVKLHYVKGGQG-PLVMLVHGFGQTW-YEWHQLMPELAKR-FTVIAPDLPG-------------LGQSEP 72 (301)
T ss_dssp TCEEEEEEETTEEEEEEEEESS-SEEEEECCTTCCG-GGGTTTHHHHTTT-SEEEEECCTT-------------STTCCC
T ss_pred ccceEEEeeCCeEEEEEEcCCC-CEEEEECCCCcch-hHHHHHHHHHHhc-CeEEEEcCCC-------------CCCCCC
Confidence 3457888999999999999955 6999999999995 9999999999998 9999999999 999987
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCCcc-EEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH---------
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGVCK-VSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV--------- 220 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--------- 220 (345)
+...+ +++++++++.++++.++.++ ++|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 73 ~~~~~----~~~~~~~~l~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 148 (301)
T 3kda_A 73 PKTGY----SGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGE 148 (301)
T ss_dssp CSSCS----SHHHHHHHHHHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEE
T ss_pred CCCCc----cHHHHHHHHHHHHHHcCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhh
Confidence 75555 78889999999999999888 99999999999999999999999999999998643221110
Q ss_pred ------HHHHH----hHhccCC-ChhhHHHHHHHcccC-CchhhhhHHHHH---------HHHHHHHHhh-----Cchhh
Q psy4974 221 ------RVFEG----MRRLSNW-SPMARSEVLKAYDND-VNYITGIFNQYV---------DMVNLIFKSY-----GRNVY 274 (345)
Q Consensus 221 ------~~~~~----~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~-----~~~~~ 274 (345)
..... ....... .......+....... ..........+. ......+... .....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (301)
T 3kda_A 149 SLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAEL 228 (301)
T ss_dssp CSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred hhhhhHHHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccc
Confidence 00000 0000000 000011111111100 000011111110 1111111111 11112
Q ss_pred hccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 275 QELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 275 ~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
...+.++++|+|+++|++| ++....+.+.+.++++++++++++||++++++|+++++.|.+|++++.+
T Consensus 229 ~~~l~~i~~P~l~i~G~~D--~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~~~ 296 (301)
T 3kda_A 229 AKTRLQMPTMTLAGGGAGG--MGTFQLEQMKAYAEDVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRGRH 296 (301)
T ss_dssp TTSCBCSCEEEEEECSTTS--CTTHHHHHHHTTBSSEEEEEETTCCSCHHHHTHHHHHHHHHHHHTTSCC
T ss_pred hhhccccCcceEEEecCCC--CChhHHHHHHhhcccCeEEEcCCCCcCchhhCHHHHHHHHHHHHhhCch
Confidence 3334588999999999999 7778888899999999999999999999999999999999999988764
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-33 Score=241.69 Aligned_cols=251 Identities=18% Similarity=0.246 Sum_probs=171.9
Q ss_pred eeeeEEEcCceEEEEEcCCC--CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 73 TEGFFSIKGCDIRFIKYGSG--AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~g~~--~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
++.++.++|.+++|...|++ +++|||+||++++. ..|...+..+.++||+|+++|+|| ||.|+.
T Consensus 6 ~~~~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G-------------~G~S~~ 71 (293)
T 1mtz_A 6 IENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMS-HDYLLSLRDMTKEGITVLFYDQFG-------------CGRSEE 71 (293)
T ss_dssp EEEEEEETTEEEEEEEECCSSCSEEEEEECCTTTCC-SGGGGGGGGGGGGTEEEEEECCTT-------------STTSCC
T ss_pred cceEEEECCEEEEEEEECCCCCCCeEEEEeCCCCcc-hhHHHHHHHHHhcCcEEEEecCCC-------------CccCCC
Confidence 46788899999999999875 27999999987764 444344455667789999999999 999986
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHh-CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHh-
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLL-GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRR- 228 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~- 228 (345)
+. . ...+++++++++.++++.+ +.++++|+||||||.+|+.+|.++|++|+++|++++.......... ...+..
T Consensus 72 ~~-~--~~~~~~~~~~dl~~~~~~l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~ 147 (293)
T 1mtz_A 72 PD-Q--SKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKE-MNRLIDE 147 (293)
T ss_dssp CC-G--GGCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHH-HHHHHHT
T ss_pred CC-C--CcccHHHHHHHHHHHHHHhcCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHH-HHHHHHh
Confidence 65 2 2226788899999999999 9999999999999999999999999999999999987642111110 000000
Q ss_pred c--------------cCC-ChhhHHHHHHHcccC---CchhhhhHHHHHHHHH--HHHHh------------hCchhhhc
Q psy4974 229 L--------------SNW-SPMARSEVLKAYDND---VNYITGIFNQYVDMVN--LIFKS------------YGRNVYQE 276 (345)
Q Consensus 229 ~--------------~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~------------~~~~~~~~ 276 (345)
. ..+ .+........++... ................ ..+.. ....+...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (293)
T 1mtz_A 148 LPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITD 227 (293)
T ss_dssp SCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTT
T ss_pred cCHHHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhh
Confidence 0 000 000000000111000 0000111111111000 00110 00112234
Q ss_pred cCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 277 LLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 277 ~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
.+.++++|+|+|+|++| .+++..++.+.+.+|++++++++++||+++.|+|+++++.|.+||.+.
T Consensus 228 ~l~~i~~P~lii~G~~D-~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 228 KISAIKIPTLITVGEYD-EVTPNVARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSDFILKH 292 (293)
T ss_dssp TGGGCCSCEEEEEETTC-SSCHHHHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred hhccCCCCEEEEeeCCC-CCCHHHHHHHHHhCCCceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 55678999999999999 677788999999999999999999999999999999999999999764
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=240.04 Aligned_cols=249 Identities=20% Similarity=0.308 Sum_probs=176.4
Q ss_pred eeeEEEc--C--ceEEEEEcCCCCceEEEEcCcC---CCchhhHHHHH-HhhCCCCeEEEEeCCCCchhhhccCCccCCC
Q psy4974 74 EGFFSIK--G--CDIRFIKYGSGAQVLFFTYGVL---GEIRNSFKKQL-TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGY 145 (345)
Q Consensus 74 ~~~~~~~--g--~~l~~~~~g~~~p~vv~lHG~~---~~~~~~~~~~~-~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~ 145 (345)
..+++++ | .+++|...|+++++|||+||++ ++ ...|..++ +.|.+. |+|+++|+|| |
T Consensus 13 ~~~~~~~~~g~~~~l~y~~~g~g~~~vvllHG~~~~~~~-~~~~~~~~~~~l~~~-~~vi~~D~~G-------------~ 77 (289)
T 1u2e_A 13 SRFLNVEEAGKTLRIHFNDCGQGDETVVLLHGSGPGATG-WANFSRNIDPLVEAG-YRVILLDCPG-------------W 77 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEECCCSSEEEEECCCSTTCCH-HHHTTTTHHHHHHTT-CEEEEECCTT-------------S
T ss_pred ceEEEEcCCCcEEEEEEeccCCCCceEEEECCCCcccch-hHHHHHhhhHHHhcC-CeEEEEcCCC-------------C
Confidence 5677787 9 9999999998755999999997 44 47888888 888877 9999999999 9
Q ss_pred CCCCCCCC-CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch----hH
Q psy4974 146 GQSLPKGR-SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID----NV 220 (345)
Q Consensus 146 G~s~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~----~~ 220 (345)
|.|+.+.. .+ +++++++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++....... ..
T Consensus 78 G~S~~~~~~~~----~~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 153 (289)
T 1u2e_A 78 GKSDSVVNSGS----RSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPT 153 (289)
T ss_dssp TTSCCCCCSSC----HHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSC
T ss_pred CCCCCCCcccc----CHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccch
Confidence 99986643 34 67888999999999999999999999999999999999999999999999986531100 00
Q ss_pred HHHHHhHhc-cCCChhhHHHHHHHcccCCchh-hhhHHHH-------HHHHHHHH---Hhh--CchhhhccCCCCCCCEE
Q psy4974 221 RVFEGMRRL-SNWSPMARSEVLKAYDNDVNYI-TGIFNQY-------VDMVNLIF---KSY--GRNVYQELLPYVDVPVL 286 (345)
Q Consensus 221 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~---~~~--~~~~~~~~l~~i~~Pvl 286 (345)
.....+... ..............+....... ....... ...+.... ... ...+....+.++++|+|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 233 (289)
T 1u2e_A 154 EGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTL 233 (289)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEE
T ss_pred hhHHHHHHHHhcchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeE
Confidence 011111000 0000111111111110000000 0111000 01111111 111 11123456778899999
Q ss_pred EEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 287 VFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 287 ~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+|+|++|.++|.+.++.+.+.++++++++++++||++++|+|+++++.|.+||++
T Consensus 234 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 234 IVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp EEEETTCSSSCTHHHHHHHHHSTTCEEEEESSCCSCHHHHTHHHHHHHHHHHHTC
T ss_pred EEeeCCCCccCHHHHHHHHhhCCCcEEEEeCCCCCchhhcCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999964
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=242.92 Aligned_cols=241 Identities=15% Similarity=0.213 Sum_probs=171.9
Q ss_pred cCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC-CCCCc
Q psy4974 80 KGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR-SFVPF 158 (345)
Q Consensus 80 ~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~-~~~~~ 158 (345)
.+.+++|...|+++ +|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+.+.. .+
T Consensus 4 ~~~~~~y~~~G~g~-~vvllHG~~~~~-~~~~~~~~~L~~~-~~vi~~Dl~G-------------~G~S~~~~~~~~--- 64 (269)
T 2xmz_A 4 THYKFYEANVETNQ-VLVFLHGFLSDS-RTYHNHIEKFTDN-YHVITIDLPG-------------HGEDQSSMDETW--- 64 (269)
T ss_dssp CSEEEECCSSCCSE-EEEEECCTTCCG-GGGTTTHHHHHTT-SEEEEECCTT-------------STTCCCCTTSCC---
T ss_pred ccceEEEEEcCCCC-eEEEEcCCCCcH-HHHHHHHHHHhhc-CeEEEecCCC-------------CCCCCCCCCCcc---
Confidence 45678998888875 799999999995 9999999999887 9999999999 999987654 44
Q ss_pred cchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhH--hcc-CCC-h
Q psy4974 159 QYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMR--RLS-NWS-P 234 (345)
Q Consensus 159 ~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--~~~-~~~-~ 234 (345)
+++++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++................ ... ... .
T Consensus 65 -~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (269)
T 2xmz_A 65 -NFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIA 143 (269)
T ss_dssp -CHHHHHHHHHHHHGGGTTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHcCCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccc
Confidence 78888999999999999999999999999999999999999999999999986543322111110000 000 000 0
Q ss_pred hhHHHHHHHcccCCchh------hhhHHHHH--------HHHHHHHHhh---CchhhhccCCCCCCCEEEEEeCCCCCCC
Q psy4974 235 MARSEVLKAYDNDVNYI------TGIFNQYV--------DMVNLIFKSY---GRNVYQELLPYVDVPVLVFHSADDVMVS 297 (345)
Q Consensus 235 ~~~~~~~~~~~~~~~~~------~~~~~~~~--------~~~~~~~~~~---~~~~~~~~l~~i~~Pvl~i~G~~D~~v~ 297 (345)
........+.... .+. ........ ..+...+... ...+....+.++++|+|+|+|++|.+++
T Consensus 144 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 222 (269)
T 2xmz_A 144 GIELFVNDWEKLP-LFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFV 222 (269)
T ss_dssp CHHHHHHHHTTSG-GGGGGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHH
T ss_pred cHHHHHHHHHhCc-cccccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccC
Confidence 0001111111110 000 00000000 0111111111 1123345677889999999999999998
Q ss_pred hHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 298 TQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
....+ +.+.++++++++++++||++++|+|+++++.|.+||++.
T Consensus 223 ~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 223 QIAKK-MANLIPNSKCKLISATGHTIHVEDSDEFDTMILGFLKEE 266 (269)
T ss_dssp HHHHH-HHHHSTTEEEEEETTCCSCHHHHSHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHhhCCCcEEEEeCCCCCChhhcCHHHHHHHHHHHHHHh
Confidence 77755 888889999999999999999999999999999999764
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-33 Score=240.65 Aligned_cols=250 Identities=14% Similarity=0.188 Sum_probs=179.5
Q ss_pred ceeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 72 FTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 72 ~~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
.+..+++++|.+++|...|++ |+|||+||++++. ..|..+++.|++ ||+|+++|+|| ||.|+.+
T Consensus 3 ~~~~~~~~~~~~~~y~~~g~~-~~vv~~HG~~~~~-~~~~~~~~~L~~-~~~vi~~d~~G-------------~G~s~~~ 66 (278)
T 3oos_A 3 WTTNIIKTPRGKFEYFLKGEG-PPLCVTHLYSEYN-DNGNTFANPFTD-HYSVYLVNLKG-------------CGNSDSA 66 (278)
T ss_dssp CEEEEEEETTEEEEEEEECSS-SEEEECCSSEECC-TTCCTTTGGGGG-TSEEEEECCTT-------------STTSCCC
T ss_pred cccCcEecCCceEEEEecCCC-CeEEEEcCCCcch-HHHHHHHHHhhc-CceEEEEcCCC-------------CCCCCCC
Confidence 347889999999999999966 5999999999995 889999999988 79999999999 9999776
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch------------h
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID------------N 219 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~------------~ 219 (345)
... ...++++.++++.++++.++.++++++|||+||.+|+.+|.++|++|+++|++++....... .
T Consensus 67 ~~~--~~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 144 (278)
T 3oos_A 67 KND--SEYSMTETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVK 144 (278)
T ss_dssp SSG--GGGSHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTT
T ss_pred CCc--ccCcHHHHHHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchh
Confidence 432 22368889999999999999999999999999999999999999999999999997661110 0
Q ss_pred -HHHHHHhHhccC--CChhhHHHHHHHcccCCchhhhhHHHHH---------HHHHHHHH--hhCchhhhccCCCCCCCE
Q psy4974 220 -VRVFEGMRRLSN--WSPMARSEVLKAYDNDVNYITGIFNQYV---------DMVNLIFK--SYGRNVYQELLPYVDVPV 285 (345)
Q Consensus 220 -~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~--~~~~~~~~~~l~~i~~Pv 285 (345)
.........+.. .......................+..+. ......+. .....+....+.++++|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 224 (278)
T 3oos_A 145 FNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPS 224 (278)
T ss_dssp HHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCE
T ss_pred HHHHHHHHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCE
Confidence 000011111100 0011111110000000000000000000 01111111 222233455667899999
Q ss_pred EEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHH
Q psy4974 286 LVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 286 l~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
++++|++|.++|.+..+.+.+.++++++++++++||+++.++|+++.+.|.+||
T Consensus 225 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 225 FIYCGKHDVQCPYIFSCEIANLIPNATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHSTTEEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred EEEEeccCCCCCHHHHHHHHhhCCCcEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999986
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=236.62 Aligned_cols=247 Identities=14% Similarity=0.107 Sum_probs=180.2
Q ss_pred eeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
.+++++|..++|...|++ |+|||+||++++. ..|..+++.|.+ .||+|+++|+|| ||.|+.+..
T Consensus 4 ~~~~~~g~~l~y~~~g~~-~~vv~lhG~~~~~-~~~~~~~~~l~~~~g~~v~~~d~~G-------------~G~s~~~~~ 68 (272)
T 3fsg_A 4 MKEYLTRSNISYFSIGSG-TPIIFLHGLSLDK-QSTCLFFEPLSNVGQYQRIYLDLPG-------------MGNSDPISP 68 (272)
T ss_dssp CCCEECTTCCEEEEECCS-SEEEEECCTTCCH-HHHHHHHTTSTTSTTSEEEEECCTT-------------STTCCCCSS
T ss_pred eEEEecCCeEEEEEcCCC-CeEEEEeCCCCcH-HHHHHHHHHHhccCceEEEEecCCC-------------CCCCCCCCC
Confidence 456789999999999966 5899999999995 999999999988 689999999999 999987654
Q ss_pred CCCCccchHHHHHHHHHHHHH-hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHH-----hH
Q psy4974 154 SFVPFQYIEEDVDIAYELLKL-LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEG-----MR 227 (345)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~l~~-~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-----~~ 227 (345)
+ +++++++++.++++. ++.++++|+|||+||.+|+.+|.++|++|+++|+++|.............. ..
T Consensus 69 -~----~~~~~~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 143 (272)
T 3fsg_A 69 -S----TSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEED 143 (272)
T ss_dssp -C----SHHHHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSC
T ss_pred -C----CHHHHHHHHHHHHHHHhCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhh
Confidence 4 788889999999999 888999999999999999999999999999999999876433211100000 00
Q ss_pred hccCCChhhHHHHHHHcccCCchhhhhHHHHHHHH-----------HHHHHhhC--chhhhccCCCCCCCEEEEEeCCCC
Q psy4974 228 RLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMV-----------NLIFKSYG--RNVYQELLPYVDVPVLVFHSADDV 294 (345)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~--~~~~~~~l~~i~~Pvl~i~G~~D~ 294 (345)
............+....... ....+..+.... ...+.... ..+....+..+++|+++++|++|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 220 (272)
T 3fsg_A 144 INPVENKEYFADFLSMNVII---NNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQ 220 (272)
T ss_dssp CCCCTTGGGHHHHHHHCSEE---SHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCT
T ss_pred hhcccCHHHHHHHHHHhccC---CCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCC
Confidence 00011111111111111111 011111111111 11111111 111122457889999999999999
Q ss_pred CCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 295 MVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 295 ~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
++|.+..+.+.+.++++++++++++||+++.++|+++.+.|.+||++..+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 270 (272)
T 3fsg_A 221 VVGYQEQLKLINHNENGEIVLLNRTGHNLMIDQREAVGFHFDLFLDELNS 270 (272)
T ss_dssp TTCSHHHHHHHTTCTTEEEEEESSCCSSHHHHTHHHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHhcCCCeEEEecCCCCCchhcCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999987643
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-33 Score=238.93 Aligned_cols=245 Identities=10% Similarity=0.056 Sum_probs=174.9
Q ss_pred eEEEcCceEEEEEcCC-CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC
Q psy4974 76 FFSIKGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS 154 (345)
Q Consensus 76 ~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~ 154 (345)
+++++|.+++|...|+ +.|+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+.+...
T Consensus 3 ~~~~~g~~l~~~~~g~~~~~~vv~lHG~~~~~-~~~~~~~~~L~~~-~~v~~~D~~G-------------~G~S~~~~~~ 67 (264)
T 3ibt_A 3 SLNVNGTLMTYSESGDPHAPTLFLLSGWCQDH-RLFKNLAPLLARD-FHVICPDWRG-------------HDAKQTDSGD 67 (264)
T ss_dssp CCEETTEECCEEEESCSSSCEEEEECCTTCCG-GGGTTHHHHHTTT-SEEEEECCTT-------------CSTTCCCCSC
T ss_pred eEeeCCeEEEEEEeCCCCCCeEEEEcCCCCcH-hHHHHHHHHHHhc-CcEEEEcccc-------------CCCCCCCccc
Confidence 5678999999999987 457999999999995 9999999999876 9999999999 9999877655
Q ss_pred CCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC-CcccceeeEeccCCCCCchhHHHHHHhHhccCCC
Q psy4974 155 FVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY-PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWS 233 (345)
Q Consensus 155 ~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (345)
+ +++++++++.++++.++.++++++||||||.+|+.+|.++ |++|+++|++++...........+........+.
T Consensus 68 ~----~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (264)
T 3ibt_A 68 F----DSQTLAQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYV 143 (264)
T ss_dssp C----CHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHHHHHTTCTTTHH
T ss_pred c----CHHHHHHHHHHHHHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcchhhcccChhhHH
Confidence 5 7888999999999999999999999999999999999999 9999999999998722221111111111111011
Q ss_pred hhhHHHHHHHcccCCc----------hh---hhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeC--CCCCCCh
Q psy4974 234 PMARSEVLKAYDNDVN----------YI---TGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSA--DDVMVST 298 (345)
Q Consensus 234 ~~~~~~~~~~~~~~~~----------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~--~D~~v~~ 298 (345)
.........++..... .. ...+......+....... ......+.++++|+++++|. .|..++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lii~g~~~~~~~~~~ 221 (264)
T 3ibt_A 144 AGRQSFFDEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTW--GSPLDRMDSLPQKPEICHIYSQPLSQDYR 221 (264)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHH--SSHHHHHHTCSSCCEEEEEECCSCCHHHH
T ss_pred HHHHHHHHHhcccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhc--cchhhcccccCCCeEEEEecCCccchhhH
Confidence 1111111122111100 00 001111111111111111 11235567899999999764 4444456
Q ss_pred HHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 299 QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
...+.+.+.++++++++++++||+++.++|+++++.|.+||++
T Consensus 222 ~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 264 (264)
T 3ibt_A 222 QLQLEFAAGHSWFHPRHIPGRTHFPSLENPVAVAQAIREFLQA 264 (264)
T ss_dssp HHHHHHHHHCTTEEEEECCCSSSCHHHHCHHHHHHHHHHHTC-
T ss_pred HHHHHHHHhCCCceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 7788889999999999999999999999999999999999863
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-33 Score=239.90 Aligned_cols=244 Identities=15% Similarity=0.214 Sum_probs=172.5
Q ss_pred EEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 78 SIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 78 ~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
..+|.+++|...|++ ++|||+||++++. ..|..+++.|+++||+|+++|+|| ||.|+.+...+
T Consensus 9 ~~~g~~l~y~~~g~~-~pvvllHG~~~~~-~~~~~~~~~L~~~g~~vi~~D~~G-------------~G~S~~~~~~~-- 71 (279)
T 1hkh_A 9 NSTPIELYYEDQGSG-QPVVLIHGYPLDG-HSWERQTRELLAQGYRVITYDRRG-------------FGGSSKVNTGY-- 71 (279)
T ss_dssp TTEEEEEEEEEESSS-EEEEEECCTTCCG-GGGHHHHHHHHHTTEEEEEECCTT-------------STTSCCCSSCC--
T ss_pred CCCCeEEEEEecCCC-CcEEEEcCCCchh-hHHhhhHHHHHhCCcEEEEeCCCC-------------CCCCCCCCCCC--
Confidence 347888999999866 4799999999995 999999999998899999999999 99998766555
Q ss_pred ccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCc-ccceeeEeccCCCCCch--------hHHHHHHhHh
Q psy4974 158 FQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH-MVHKLVIWGTKSFLTID--------NVRVFEGMRR 228 (345)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~--------~~~~~~~~~~ 228 (345)
+++++++++.+++++++.++++|+||||||.+|+.+|.++|+ +|+++|++++....... ....+..+..
T Consensus 72 --~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (279)
T 1hkh_A 72 --DYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEA 149 (279)
T ss_dssp --SHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHH
Confidence 788889999999999999999999999999999999999998 99999999985331100 0011111100
Q ss_pred -ccCCChh-hHHHHHHHccc----CCchhhhhHHHHHHH--------HHHHHHhhCchhhhccCCCC---CCCEEEEEeC
Q psy4974 229 -LSNWSPM-ARSEVLKAYDN----DVNYITGIFNQYVDM--------VNLIFKSYGRNVYQELLPYV---DVPVLVFHSA 291 (345)
Q Consensus 229 -~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~i---~~Pvl~i~G~ 291 (345)
....... ........+.. ...........+... ........ ..+....+.++ ++|+|+++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~~~~P~lii~G~ 228 (279)
T 1hkh_A 150 AAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAW-IEDFRSDVEAVRAAGKPTLILHGT 228 (279)
T ss_dssp HHHHCHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHH-TCBCHHHHHHHHHHCCCEEEEEET
T ss_pred HhhhhhhhhHHHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHH-hhchhhhHHHhccCCCCEEEEEcC
Confidence 0000000 00001111110 000011111111110 00011111 11223345567 8999999999
Q ss_pred CCCCCChHHH-HHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 292 DDVMVSTQQV-QSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 292 ~D~~v~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+|.++|.+.. +.+.+.++++++++++++||+++.|+|+++++.|.+||++
T Consensus 229 ~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 279 (279)
T 1hkh_A 229 KDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp TCSSSCTTTTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred CCccCChHHHHHHHHHhCCCeeEEEeCCCCccchhcCHHHHHHHHHHHhhC
Confidence 9999998877 8889999999999999999999999999999999999963
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-33 Score=242.18 Aligned_cols=252 Identities=13% Similarity=0.129 Sum_probs=181.4
Q ss_pred ceeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 72 FTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 72 ~~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
++..++.++|..++|...|++ |+|||+||++++. ..|..+++.|...||+|+++|+|| ||.|+.+
T Consensus 9 ~~~~~~~~~g~~l~~~~~g~~-~~vv~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G-------------~G~S~~~ 73 (309)
T 3u1t_A 9 FAKRTVEVEGATIAYVDEGSG-QPVLFLHGNPTSS-YLWRNIIPYVVAAGYRAVAPDLIG-------------MGDSAKP 73 (309)
T ss_dssp CCCEEEEETTEEEEEEEEECS-SEEEEECCTTCCG-GGGTTTHHHHHHTTCEEEEECCTT-------------STTSCCC
T ss_pred ccceEEEECCeEEEEEEcCCC-CEEEEECCCcchh-hhHHHHHHHHHhCCCEEEEEccCC-------------CCCCCCC
Confidence 457889999999999999985 5999999999995 999999999666689999999999 9999877
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc------hhHHHH-H
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI------DNVRVF-E 224 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~------~~~~~~-~ 224 (345)
...+ +++++++++.++++.++.++++|+|||+||.+|+.+|.++|++|+++|++++...... ...... .
T Consensus 74 ~~~~----~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 149 (309)
T 3u1t_A 74 DIEY----RLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGP 149 (309)
T ss_dssp SSCC----CHHHHHHHHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHH
T ss_pred Cccc----CHHHHHHHHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhH
Confidence 6555 7888899999999999999999999999999999999999999999999998654320 111100 0
Q ss_pred HhHhccC----------CChhhHHHHHHH-cccCCchhhhhHHHH---------HHHHHHHHHhhC-----------chh
Q psy4974 225 GMRRLSN----------WSPMARSEVLKA-YDNDVNYITGIFNQY---------VDMVNLIFKSYG-----------RNV 273 (345)
Q Consensus 225 ~~~~~~~----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-----------~~~ 273 (345)
....... ........+... .... ........+ .......+.... ..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (309)
T 3u1t_A 150 LFRDLRTADVGEKMVLDGNFFVETILPEMGVVRS--LSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLK 227 (309)
T ss_dssp HHHHHTSTTHHHHHHTTTCHHHHTHHHHTSCSSC--CCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHH
T ss_pred HHHHHhccchhhhhccccceehhhhccccccccc--CCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhh
Confidence 0000000 000000000000 0000 000000000 000001110000 012
Q ss_pred hhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 274 YQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 274 ~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
....+.++++|+|+|+|++|.++|.+..+.+.+.+++.+.++++++||+++.++|+++.+.|.+||++..+
T Consensus 228 ~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~ 298 (309)
T 3u1t_A 228 NGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENVPNLEVRFVGAGTHFLQEDHPHLIGQGIADWLRRNKP 298 (309)
T ss_dssp HHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHHCC
T ss_pred hhhhcccCCCCEEEEecCCCCCCCHHHHHHHHhhCCCCEEEEecCCcccchhhCHHHHHHHHHHHHHhcch
Confidence 23345678999999999999999999999999999999999999999999999999999999999987653
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=238.35 Aligned_cols=247 Identities=13% Similarity=0.133 Sum_probs=168.9
Q ss_pred eeeEEEcCceEEEEEcCCC--CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSG--AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~--~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
..+...+|.+++|...|+. .|+|||+||++++. ..|..+++.|++ ||+|+++|+|| ||.|+.+
T Consensus 8 ~~~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~-~~~~~~~~~L~~-~~~vi~~Dl~G-------------~G~S~~~ 72 (285)
T 3bwx_A 8 RYWTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNA-RDFEDLATRLAG-DWRVLCPEMRG-------------RGDSDYA 72 (285)
T ss_dssp EEEECTTSCEEEEEEECBCTTSCCEEEECCTTCCG-GGGHHHHHHHBB-TBCEEEECCTT-------------BTTSCCC
T ss_pred CeeecCCCceEEEEEcCCCCCCCcEEEECCCCcch-hhHHHHHHHhhc-CCEEEeecCCC-------------CCCCCCC
Confidence 3445569999999998863 47999999999995 999999999988 69999999999 9999765
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh-Hhcc
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM-RRLS 230 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~ 230 (345)
... ...+++++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.+............. ....
T Consensus 73 ~~~--~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 150 (285)
T 3bwx_A 73 KDP--MTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGR 150 (285)
T ss_dssp SSG--GGCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHTTCCC
T ss_pred CCc--cccCHHHHHHHHHHHHHhcCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHHHHHhcCCc
Confidence 311 1226788899999999999999999999999999999999999999999999986544332211111100 0000
Q ss_pred CCCh--hhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhh-Cc-----------------------hhhhccCCCC-CC
Q psy4974 231 NWSP--MARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSY-GR-----------------------NVYQELLPYV-DV 283 (345)
Q Consensus 231 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------------------~~~~~~l~~i-~~ 283 (345)
.... .....+....... +.......+.......+... .. .+....+.++ ++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (285)
T 3bwx_A 151 NFETWMHAARALQESSGDV--YPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATR 228 (285)
T ss_dssp EESSHHHHHHHHHHHHTTT--STTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTS
T ss_pred ccccHHHHHHHHHHhhhhc--ccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCC
Confidence 0000 0001111111111 00000011111111111000 00 0000011123 79
Q ss_pred CEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 284 PVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 284 Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
|+|+|+|++|.+++.+..+.+.+. +++++++++++||++++|+|+.+ +.|.+||++
T Consensus 229 P~lii~G~~D~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 229 PLLVLRGETSDILSAQTAAKMASR-PGVELVTLPRIGHAPTLDEPESI-AAIGRLLER 284 (285)
T ss_dssp CEEEEEETTCSSSCHHHHHHHHTS-TTEEEEEETTCCSCCCSCSHHHH-HHHHHHHTT
T ss_pred CeEEEEeCCCCccCHHHHHHHHhC-CCcEEEEeCCCCccchhhCchHH-HHHHHHHHh
Confidence 999999999999999999999999 99999999999999999999987 579999964
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=238.17 Aligned_cols=241 Identities=17% Similarity=0.225 Sum_probs=167.3
Q ss_pred EEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHH
Q psy4974 85 RFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEED 164 (345)
Q Consensus 85 ~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~ 164 (345)
+|...|+++|+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+.+........+++++
T Consensus 12 ~~~~~G~g~~~vvllHG~~~~~-~~w~~~~~~L~~~-~~vi~~Dl~G-------------~G~S~~~~~~~~~~~~~~~~ 76 (271)
T 1wom_A 12 HVKVKGSGKASIMFAPGFGCDQ-SVWNAVAPAFEED-HRVILFDYVG-------------SGHSDLRAYDLNRYQTLDGY 76 (271)
T ss_dssp TCEEEECCSSEEEEECCTTCCG-GGGTTTGGGGTTT-SEEEECCCSC-------------CSSSCCTTCCTTGGGSHHHH
T ss_pred eeEeecCCCCcEEEEcCCCCch-hhHHHHHHHHHhc-CeEEEECCCC-------------CCCCCCCcccccccccHHHH
Confidence 3445566767999999999995 9999999999885 9999999999 99997653111022378889
Q ss_pred HHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh--------HHHHHH-hHhccCCChh
Q psy4974 165 VDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN--------VRVFEG-MRRLSNWSPM 235 (345)
Q Consensus 165 ~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~ 235 (345)
++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.+...... ...... ..........
T Consensus 77 a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (271)
T 1wom_A 77 AQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIG 156 (271)
T ss_dssp HHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHcCCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHH
Confidence 9999999999999999999999999999999999999999999999864321110 000000 0000000000
Q ss_pred hHHHHH-HHcccCCchhhhhHHHHHHH--------HHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHh
Q psy4974 236 ARSEVL-KAYDNDVNYITGIFNQYVDM--------VNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLN 306 (345)
Q Consensus 236 ~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~ 306 (345)
...... ..+... ......+.+... ...........+....+.++++|+|+|+|++|.++|.+..+.+.+
T Consensus 157 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~ 234 (271)
T 1wom_A 157 WATVFAATVLNQP--DRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQ 234 (271)
T ss_dssp HHHHHHHHHHCCT--TCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCC--CchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHH
Confidence 000000 011100 000011111100 011111111123345567899999999999999999999999999
Q ss_pred hcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 307 QLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 307 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
.++++++++++++||++++|+|+++++.|.+||+++
T Consensus 235 ~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 235 HLPYSSLKQMEARGHCPHMSHPDETIQLIGDYLKAH 270 (271)
T ss_dssp HSSSEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHH
T ss_pred HCCCCEEEEeCCCCcCccccCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999864
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-32 Score=236.43 Aligned_cols=252 Identities=15% Similarity=0.217 Sum_probs=181.6
Q ss_pred ceeeeEEEcCceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 72 FTEGFFSIKGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 72 ~~~~~~~~~g~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
++..++.++|..++|...|+. .|+|||+||++++. ..|..+++.|++ ||+|+++|+|| ||.|+.
T Consensus 10 ~~~~~~~~~g~~l~~~~~g~~~~~~vl~lHG~~~~~-~~~~~~~~~l~~-~~~v~~~d~~G-------------~G~s~~ 74 (299)
T 3g9x_A 10 FDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSS-YLWRNIIPHVAP-SHRCIAPDLIG-------------MGKSDK 74 (299)
T ss_dssp CCCEEEEETTEEEEEEEESCSSSCCEEEECCTTCCG-GGGTTTHHHHTT-TSCEEEECCTT-------------STTSCC
T ss_pred cceeeeeeCCeEEEEEecCCCCCCEEEEECCCCccH-HHHHHHHHHHcc-CCEEEeeCCCC-------------CCCCCC
Confidence 447889999999999999873 47999999999995 899999999975 69999999999 999987
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch------hHHHHH
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID------NVRVFE 224 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~------~~~~~~ 224 (345)
+...+ +++++++++.++++.++.++++|+|||+||.+|+.+|.++|++|+++|++++....... ....+.
T Consensus 75 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 150 (299)
T 3g9x_A 75 PDLDY----FFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQ 150 (299)
T ss_dssp CCCCC----CHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHH
T ss_pred CCCcc----cHHHHHHHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHH
Confidence 76555 78888999999999999999999999999999999999999999999999965443211 111111
Q ss_pred HhHhc-------cCCChhhHHHHHHHcccCCchhhhhHHHH---------HHHHHHHHHhhC-----------chhhhcc
Q psy4974 225 GMRRL-------SNWSPMARSEVLKAYDNDVNYITGIFNQY---------VDMVNLIFKSYG-----------RNVYQEL 277 (345)
Q Consensus 225 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-----------~~~~~~~ 277 (345)
.+... ..............+... ........+ .......+.... ..+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (299)
T 3g9x_A 151 AFRTADVGRELIIDQNAFIEGALPKCVVRP--LTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNW 228 (299)
T ss_dssp HHTSSSHHHHHHTTSCHHHHTHHHHTCSSC--CCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHH
T ss_pred HHcCCCcchhhhccchhhHHHhhhhhhccC--CCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhh
Confidence 11000 000000000000000000 000000000 000011111100 0122334
Q ss_pred CCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 278 LPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 278 l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
+.++++|+++++|++|.++|.+..+.+.+.++++++++++++||++++++|+++++.|.+++.++.+
T Consensus 229 l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~~~~ 295 (299)
T 3g9x_A 229 LHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPALHH 295 (299)
T ss_dssp HHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHHHHHHHSGGGCC
T ss_pred cccCCCCeEEEecCCCCCCCHHHHHHHHhhCCCCeEEEeCCCCCcchhcCHHHHHHHHHHHHhhhhh
Confidence 5678999999999999999999999999999999999999999999999999999999999987654
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=237.55 Aligned_cols=251 Identities=14% Similarity=0.141 Sum_probs=173.5
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC--
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK-- 151 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~-- 151 (345)
..++.++|..++|...|++ |+|||+||++++. ..|..+++.|.+.||+|+++|+|| ||.|+.+
T Consensus 13 ~~~~~~~g~~l~y~~~G~g-~~vvllHG~~~~~-~~w~~~~~~L~~~g~~via~Dl~G-------------~G~S~~~~~ 77 (328)
T 2cjp_A 13 HKMVAVNGLNMHLAELGEG-PTILFIHGFPELW-YSWRHQMVYLAERGYRAVAPDLRG-------------YGDTTGAPL 77 (328)
T ss_dssp EEEEEETTEEEEEEEECSS-SEEEEECCTTCCG-GGGHHHHHHHHTTTCEEEEECCTT-------------STTCBCCCT
T ss_pred eeEecCCCcEEEEEEcCCC-CEEEEECCCCCch-HHHHHHHHHHHHCCcEEEEECCCC-------------CCCCCCcCc
Confidence 5677889999999999865 6999999999995 999999999988889999999999 9999765
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhC--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc---hhHHHHHHh
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLG--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI---DNVRVFEGM 226 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~~ 226 (345)
... ...+++++++++.++++.++ .++++|+||||||.+|+.+|.++|++|+++|+++++..... .........
T Consensus 78 ~~~--~~~~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 155 (328)
T 2cjp_A 78 NDP--SKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAI 155 (328)
T ss_dssp TCG--GGGSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCHHHHHHHH
T ss_pred CCc--ccccHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCChHHHHHhh
Confidence 221 12268889999999999999 99999999999999999999999999999999987543211 111111100
Q ss_pred -------HhccCCC--h------hhHHHHHHHcc---c-------CCchh--------------hhhHHHHHHHHH----
Q psy4974 227 -------RRLSNWS--P------MARSEVLKAYD---N-------DVNYI--------------TGIFNQYVDMVN---- 263 (345)
Q Consensus 227 -------~~~~~~~--~------~~~~~~~~~~~---~-------~~~~~--------------~~~~~~~~~~~~---- 263 (345)
....... . .....+...+. . ...+. ......+...+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (328)
T 2cjp_A 156 YGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGF 235 (328)
T ss_dssp HCTTBHHHHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCS
T ss_pred cccchHHHhhhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHHHhcccCC
Confidence 0000000 0 01111112221 0 00000 000111111110
Q ss_pred ----HHHHhhCc-hhh--hccCCCCCCCEEEEEeCCCCCCChH----H--HHHHHhhcCCc-EEEEeCCCCCcccccChH
Q psy4974 264 ----LIFKSYGR-NVY--QELLPYVDVPVLVFHSADDVMVSTQ----Q--VQSLLNQLKFC-QYYQFSSGGHSCHIKHGQ 329 (345)
Q Consensus 264 ----~~~~~~~~-~~~--~~~l~~i~~Pvl~i~G~~D~~v~~~----~--~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~ 329 (345)
..+..... ... ...+.++++|+|+|+|++|.++|.. . ++.+.+.+|++ ++++++++||++++|+|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~gH~~~~e~p~ 315 (328)
T 2cjp_A 236 TGAVNYYRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQERPH 315 (328)
T ss_dssp HHHHHHHHTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTTBCCCEEETTCCSCHHHHSHH
T ss_pred cchHHHHHhcccchhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhcCCeeEEEcCCCCCCcchhCHH
Confidence 00100000 000 1146789999999999999999863 2 25677788998 899999999999999999
Q ss_pred HHHHHHHHHHHh
Q psy4974 330 VFNEISRNFILE 341 (345)
Q Consensus 330 ~~~~~i~~fl~~ 341 (345)
++++.|.+||++
T Consensus 316 ~~~~~i~~fl~~ 327 (328)
T 2cjp_A 316 EISKHIYDFIQK 327 (328)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHh
Confidence 999999999964
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-32 Score=236.40 Aligned_cols=255 Identities=15% Similarity=0.098 Sum_probs=172.4
Q ss_pred ceeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 72 FTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 72 ~~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
++..++.++|.+++|...|++ |+|||+||++++. ..|..+++.|.+ ||+|+++|+|| ||.|+.+
T Consensus 13 ~~~~~~~~~g~~l~~~~~g~~-~~vv~lHG~~~~~-~~~~~~~~~l~~-~~~v~~~D~~G-------------~G~S~~~ 76 (306)
T 3r40_A 13 FGSEWINTSSGRIFARVGGDG-PPLLLLHGFPQTH-VMWHRVAPKLAE-RFKVIVADLPG-------------YGWSDMP 76 (306)
T ss_dssp CEEEEECCTTCCEEEEEEECS-SEEEEECCTTCCG-GGGGGTHHHHHT-TSEEEEECCTT-------------STTSCCC
T ss_pred CceEEEEeCCEEEEEEEcCCC-CeEEEECCCCCCH-HHHHHHHHHhcc-CCeEEEeCCCC-------------CCCCCCC
Confidence 457788889999999999865 6999999999995 999999999988 79999999999 9999876
Q ss_pred CCCCC-CccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH--HHHHH---
Q psy4974 152 GRSFV-PFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV--RVFEG--- 225 (345)
Q Consensus 152 ~~~~~-~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~~--- 225 (345)
..... ...+++++++++.++++.++.++++|+|||+||.+|+.+|.++|++|+++|++++.+....... .....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 156 (306)
T 3r40_A 77 ESDEQHTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIY 156 (306)
T ss_dssp CCCTTCGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHST
T ss_pred CCCcccCCCCHHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhH
Confidence 65200 0237888999999999999999999999999999999999999999999999998543211100 00000
Q ss_pred -hH----------h-ccCCChhhHHH-HHHHccc--CCchhhhhHHHHH---------HHHHHHHHhhCchh------hh
Q psy4974 226 -MR----------R-LSNWSPMARSE-VLKAYDN--DVNYITGIFNQYV---------DMVNLIFKSYGRNV------YQ 275 (345)
Q Consensus 226 -~~----------~-~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~~~~~~~------~~ 275 (345)
.. . ........... ....... .........+.+. ......+......+ ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (306)
T 3r40_A 157 HWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDKIDV 236 (306)
T ss_dssp HHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccchhhhhhh
Confidence 00 0 00000001111 1111111 0001111111111 11111111111111 11
Q ss_pred ccCCCCCCCEEEEEeCCCCCCC-hHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 276 ELLPYVDVPVLVFHSADDVMVS-TQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 276 ~~l~~i~~Pvl~i~G~~D~~v~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
..+.++++|+++|+|++|.++| ....+.+.+..++.++.++ ++||+++.++|+++++.|.+||++..
T Consensus 237 ~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (306)
T 3r40_A 237 EAGNKIPVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPI-ESGHFLPEEAPDQTAEALVRFFSAAP 304 (306)
T ss_dssp HHTCCBCSCEEEEEETTCC------CHHHHHHHBSSEEEEEE-SSCSCHHHHSHHHHHHHHHHHHHC--
T ss_pred hhccCCCcceEEEEecCCcccCchhHHHHHHhhcCCCeEEEe-cCCcCchhhChHHHHHHHHHHHHhcc
Confidence 2568899999999999999998 5667777777889999999 68999999999999999999998764
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=237.93 Aligned_cols=254 Identities=18% Similarity=0.198 Sum_probs=185.2
Q ss_pred eeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
+..+++.++..++|...++..|+|||+||++++. ..|..+++.|..+||+|+++|+|| ||.|+.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~vv~lHG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G-------------~G~s~~~~ 69 (279)
T 4g9e_A 4 NYHELETSHGRIAVRESEGEGAPLLMIHGNSSSG-AIFAPQLEGEIGKKWRVIAPDLPG-------------HGKSTDAI 69 (279)
T ss_dssp EEEEEEETTEEEEEEECCCCEEEEEEECCTTCCG-GGGHHHHHSHHHHHEEEEEECCTT-------------STTSCCCS
T ss_pred EEEEEEcCCceEEEEecCCCCCeEEEECCCCCch-hHHHHHHhHHHhcCCeEEeecCCC-------------CCCCCCCC
Confidence 4678888888999999987778999999999995 999999999666789999999999 99997653
Q ss_pred CCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh-----H
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM-----R 227 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-----~ 227 (345)
... ...++++.++++.++++.++.++++++|||+||.+|+.+|.++|+ +.++|+++++..........+... .
T Consensus 70 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 147 (279)
T 4g9e_A 70 DPD-RSYSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALA 147 (279)
T ss_dssp CHH-HHSSHHHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGG
T ss_pred Ccc-cCCCHHHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhc
Confidence 222 233788899999999999999999999999999999999999998 899999988765443322111100 0
Q ss_pred hccCCChhhHHH-HHHHcccCCchhhhhHH-------HHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH
Q psy4974 228 RLSNWSPMARSE-VLKAYDNDVNYITGIFN-------QYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ 299 (345)
Q Consensus 228 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~ 299 (345)
............ ....+... ....... .........+......+....+.++++|+|+++|++|.++|.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~ 225 (279)
T 4g9e_A 148 GQEIFSERDVESYARSTCGEP--FEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELD 225 (279)
T ss_dssp GCSCCCHHHHHHHHHHHHCSS--CCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHH
T ss_pred CcccccHHHHHHHHHhhccCc--ccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchH
Confidence 001111111111 12222222 1111111 1111122222223333444556678999999999999999999
Q ss_pred HHHHHH-hhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 300 QVQSLL-NQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 300 ~~~~~~-~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
..+.+. +.++++++++++++||+++.++|+++.+.|.+||++..+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~ 271 (279)
T 4g9e_A 226 FVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYLARFIRDCTQ 271 (279)
T ss_dssp HHTTCCCSSBGGGSCEEETTCCSCHHHHSHHHHHHHHHHHHHHHHS
T ss_pred HHHHHhhccCCCCeEEEECCCCcchHHhCHHHHHHHHHHHHHHhhh
Confidence 888887 777889999999999999999999999999999987653
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-31 Score=234.83 Aligned_cols=248 Identities=17% Similarity=0.161 Sum_probs=183.1
Q ss_pred cceeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 71 VFTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 71 ~~~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
..+..++.++|..++|...|++ |+||++||++++. ..|..+++.|++. |+|+++|+|| +|.|..
T Consensus 47 ~~~~~~~~~~~~~~~~~~~g~~-p~vv~lhG~~~~~-~~~~~~~~~L~~~-~~v~~~D~~G-------------~G~S~~ 110 (314)
T 3kxp_A 47 HFISRRVDIGRITLNVREKGSG-PLMLFFHGITSNS-AVFEPLMIRLSDR-FTTIAVDQRG-------------HGLSDK 110 (314)
T ss_dssp CCEEEEEECSSCEEEEEEECCS-SEEEEECCTTCCG-GGGHHHHHTTTTT-SEEEEECCTT-------------STTSCC
T ss_pred CcceeeEEECCEEEEEEecCCC-CEEEEECCCCCCH-HHHHHHHHHHHcC-CeEEEEeCCC-------------cCCCCC
Confidence 3457788889999999999884 6999999999995 9999999999984 9999999999 999985
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS 230 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 230 (345)
+...+ +++++++++.++++.++.++++++|||+||.+++.+|.++|++|+++|++++...................
T Consensus 111 ~~~~~----~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 186 (314)
T 3kxp_A 111 PETGY----EANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAG 186 (314)
T ss_dssp CSSCC----SHHHHHHHHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTT
T ss_pred CCCCC----CHHHHHHHHHHHHHHhCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhc
Confidence 55544 78888999999999999999999999999999999999999999999999987765444332222111111
Q ss_pred CCCh----hhHHHHHHHcccCCchhhhhHHHHHH----------------HHHHHHHhhCchhhhccCCCCCCCEEEEEe
Q psy4974 231 NWSP----MARSEVLKAYDNDVNYITGIFNQYVD----------------MVNLIFKSYGRNVYQELLPYVDVPVLVFHS 290 (345)
Q Consensus 231 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G 290 (345)
.... .....+...+... .......... ............+....+.++++|+|+++|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G 263 (314)
T 3kxp_A 187 SQLFEDIKAVEAYLAGRYPNI---PADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRG 263 (314)
T ss_dssp CSCBSSHHHHHHHHHHHSTTS---CHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEE
T ss_pred hhhhcCHHHHHHHHHhhcccC---chHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEec
Confidence 1000 0111111111110 0000000000 000011111111334445678999999999
Q ss_pred CCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 291 ADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 291 ~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
++|.++|.+..+.+.+.++++++++++++||+++.++|+++.+.|.+||++
T Consensus 264 ~~D~~~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 264 ESSKLVSAAALAKTSRLRPDLPVVVVPGADHYVNEVSPEITLKAITNFIDA 314 (314)
T ss_dssp TTCSSSCHHHHHHHHHHCTTSCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred CCCccCCHHHHHHHHHhCCCceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999974
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-32 Score=232.99 Aligned_cols=241 Identities=17% Similarity=0.228 Sum_probs=172.4
Q ss_pred eEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchH
Q psy4974 83 DIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIE 162 (345)
Q Consensus 83 ~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~ 162 (345)
.++|...|+++|+|||+||++++. ..|..+++.|.+ ||+|+++|+|| ||.|+.+........+++
T Consensus 10 ~l~~~~~g~~~p~vv~~HG~~~~~-~~~~~~~~~l~~-g~~v~~~D~~G-------------~G~S~~~~~~~~~~~~~~ 74 (269)
T 4dnp_A 10 ALNVRVVGSGERVLVLAHGFGTDQ-SAWNRILPFFLR-DYRVVLYDLVC-------------AGSVNPDFFDFRRYTTLD 74 (269)
T ss_dssp HTTCEEECSCSSEEEEECCTTCCG-GGGTTTGGGGTT-TCEEEEECCTT-------------STTSCGGGCCTTTCSSSH
T ss_pred HhhhhhcCCCCCEEEEEeCCCCcH-HHHHHHHHHHhC-CcEEEEEcCCC-------------CCCCCCCCCCccccCcHH
Confidence 466778888888999999999995 999999999998 89999999999 999965211110233788
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh-------HHHHH-HhHhccCCCh
Q psy4974 163 EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN-------VRVFE-GMRRLSNWSP 234 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-------~~~~~-~~~~~~~~~~ 234 (345)
+.++++.++++.++.++++|+|||+||.+|+.+|.++|++|+++|++++........ ..... ..........
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (269)
T 4dnp_A 75 PYVDDLLHILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYE 154 (269)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHH
Confidence 899999999999999999999999999999999999999999999999865432110 00000 0000000000
Q ss_pred hhHHHHHH-HcccCCchhhhhHHHHHH--------HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHH
Q psy4974 235 MARSEVLK-AYDNDVNYITGIFNQYVD--------MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLL 305 (345)
Q Consensus 235 ~~~~~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~ 305 (345)
........ ..... .......+.. ............+....+.++++|+++++|++|.++|.+..+.+.
T Consensus 155 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 231 (269)
T 4dnp_A 155 AWVNGFAPLAVGAD---VPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLK 231 (269)
T ss_dssp HHHHHHHHHHHCSS---CHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHH
T ss_pred HHHHHhhhhhccCC---ChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHH
Confidence 01111111 11111 1111111111 111122222233445667788999999999999999999999999
Q ss_pred hhcCC-cEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 306 NQLKF-CQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 306 ~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+.+++ +++++++++||+++.++|+++++.|.+||++
T Consensus 232 ~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 232 NHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRRALSH 268 (269)
T ss_dssp HHSSSCEEEEEEEEESSCHHHHCHHHHHHHHHHHHC-
T ss_pred HhCCCCceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 99998 7999999999999999999999999999975
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-32 Score=236.70 Aligned_cols=247 Identities=16% Similarity=0.173 Sum_probs=177.1
Q ss_pred eeeeEEEcCceEEEEEcCC-CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCC-CCCCC
Q psy4974 73 TEGFFSIKGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGY-GQSLP 150 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~-G~s~~ 150 (345)
+..++.+++..++|...|+ ..|+|||+||++++. ..|..+++.|++ ||+|+++|+|| + |.|..
T Consensus 46 ~~~~v~~~~~~~~~~~~g~~~~~~vv~lHG~~~~~-~~~~~~~~~L~~-g~~vi~~D~~G-------------~gG~s~~ 110 (306)
T 2r11_A 46 KSFYISTRFGQTHVIASGPEDAPPLVLLHGALFSS-TMWYPNIADWSS-KYRTYAVDIIG-------------DKNKSIP 110 (306)
T ss_dssp EEEEECCTTEEEEEEEESCTTSCEEEEECCTTTCG-GGGTTTHHHHHH-HSEEEEECCTT-------------SSSSCEE
T ss_pred ceEEEecCCceEEEEeeCCCCCCeEEEECCCCCCH-HHHHHHHHHHhc-CCEEEEecCCC-------------CCCCCCC
Confidence 3677788888999998886 357999999999995 889999999987 79999999999 9 88866
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS 230 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 230 (345)
+...+ +++++++++.++++.++.++++|+|||+||.+|+.+|.++|++|+++|++++..................
T Consensus 111 ~~~~~----~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~- 185 (306)
T 2r11_A 111 ENVSG----TRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGL- 185 (306)
T ss_dssp CSCCC----CHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTT-
T ss_pred CCCCC----CHHHHHHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHH-
Confidence 54444 7788899999999999999999999999999999999999999999999999776543322222211111
Q ss_pred CCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHH-H---hhC-------chhhhccCCCCCCCEEEEEeCCCCCCChH
Q psy4974 231 NWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIF-K---SYG-------RNVYQELLPYVDVPVLVFHSADDVMVSTQ 299 (345)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~-------~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~ 299 (345)
........+..++.............. ......+ . .+. .......+.++++|+|+++|++|.++|.+
T Consensus 186 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 263 (306)
T 2r11_A 186 -TASNGVETFLNWMMNDQNVLHPIFVKQ-FKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPH 263 (306)
T ss_dssp -TSTTHHHHHHHHHTTTCCCSCHHHHHH-HHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHH
T ss_pred -HHHHHHHHHHHHhhCCccccccccccc-cHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHH
Confidence 111122222222222210000010000 0011100 0 000 00123345678999999999999999988
Q ss_pred HHHHHH-hhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 300 QVQSLL-NQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 300 ~~~~~~-~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
..+++. +.++++++++++++||+++.++|+++++.|.+||++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 264 SALHRASSFVPDIEAEVIKNAGHVLSMEQPTYVNERVMRFFNA 306 (306)
T ss_dssp HHHHHHHHHSTTCEEEEETTCCTTHHHHSHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCCCcccCHHHHHHHHHHHHhC
Confidence 877554 467899999999999999999999999999999963
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-31 Score=227.07 Aligned_cols=230 Identities=15% Similarity=0.192 Sum_probs=157.9
Q ss_pred cCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCcc
Q psy4974 80 KGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQ 159 (345)
Q Consensus 80 ~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~ 159 (345)
++..++|. +. .|+|||+||++++. ..|..+++.|+++||+|+++|+|| ||.|......+ +..
T Consensus 6 ~~~~~~~~--~~-~~~vvllHG~~~~~-~~~~~~~~~L~~~g~~vi~~D~~G-------------hG~s~~~~~~~-~~~ 67 (247)
T 1tqh_A 6 PPKPFFFE--AG-ERAVLLLHGFTGNS-ADVRMLGRFLESKGYTCHAPIYKG-------------HGVPPEELVHT-GPD 67 (247)
T ss_dssp CCCCEEEC--CS-SCEEEEECCTTCCT-HHHHHHHHHHHHTTCEEEECCCTT-------------SSSCHHHHTTC-CHH
T ss_pred CCCCeeeC--CC-CcEEEEECCCCCCh-HHHHHHHHHHHHCCCEEEecccCC-------------CCCCHHHhcCC-CHH
Confidence 55666665 33 46899999999995 899999999988889999999999 99774332334 333
Q ss_pred chHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhH-------hccCC
Q psy4974 160 YIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMR-------RLSNW 232 (345)
Q Consensus 160 ~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-------~~~~~ 232 (345)
.+.+.+.++.+++++++.++++|+||||||.+|+.+|.++| |+++|+++++....... ....... .....
T Consensus 68 ~~~~d~~~~~~~l~~~~~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 144 (247)
T 1tqh_A 68 DWWQDVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEE-TMYEGVLEYAREYKKREGK 144 (247)
T ss_dssp HHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHH-HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcch-hhhHHHHHHHHHhhccccc
Confidence 34444555667788888999999999999999999999998 99999887654422111 0000000 00000
Q ss_pred ChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC--
Q psy4974 233 SPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF-- 310 (345)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~-- 310 (345)
...........+... ..... ..+.... .+....+.++++|+|+|+|++|.++|.+.++.+++.+++
T Consensus 145 ~~~~~~~~~~~~~~~---~~~~~----~~~~~~~-----~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~ 212 (247)
T 1tqh_A 145 SEEQIEQEMEKFKQT---PMKTL----KALQELI-----ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPV 212 (247)
T ss_dssp CHHHHHHHHHHHTTS---CCTTH----HHHHHHH-----HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSS
T ss_pred chHHHHhhhhcccCC---CHHHH----HHHHHHH-----HHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCCCc
Confidence 000000000001000 00000 0111110 123456778899999999999999999999999999986
Q ss_pred cEEEEeCCCCCcccccC-hHHHHHHHHHHHHhh
Q psy4974 311 CQYYQFSSGGHSCHIKH-GQVFNEISRNFILEE 342 (345)
Q Consensus 311 ~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~~ 342 (345)
+++++++++||+++.|+ |+++++.|.+||++.
T Consensus 213 ~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 213 KQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 245 (247)
T ss_dssp EEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred eEEEEeCCCceeeccCccHHHHHHHHHHHHHhc
Confidence 69999999999999975 799999999999864
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-33 Score=240.53 Aligned_cols=222 Identities=15% Similarity=0.123 Sum_probs=157.6
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
++.|||+||++++. ..|..+++.|+++||+|+++|+|| ||.|......+ ++.++++++.+++
T Consensus 51 ~~~VlllHG~~~s~-~~~~~la~~La~~Gy~Via~Dl~G-------------hG~S~~~~~~~----~~~~~~~d~~~~~ 112 (281)
T 4fbl_A 51 RIGVLVSHGFTGSP-QSMRFLAEGFARAGYTVATPRLTG-------------HGTTPAEMAAS----TASDWTADIVAAM 112 (281)
T ss_dssp SEEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEECCCTT-------------SSSCHHHHHTC----CHHHHHHHHHHHH
T ss_pred CceEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEECCCC-------------CCCCCccccCC----CHHHHHHHHHHHH
Confidence 35799999999995 999999999999999999999999 99996443333 5677788888888
Q ss_pred HHh--CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccC----CChhhHHHHHHHccc
Q psy4974 173 KLL--GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSN----WSPMARSEVLKAYDN 246 (345)
Q Consensus 173 ~~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 246 (345)
+.+ +.++++|+||||||.+|+.+|.++|++|+++|++++.................... ...............
T Consensus 113 ~~l~~~~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (281)
T 4fbl_A 113 RWLEERCDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAY 192 (281)
T ss_dssp HHHHHHCSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCC
T ss_pred HHHHhCCCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhh
Confidence 776 46799999999999999999999999999999999976654333222211111100 000000000000000
Q ss_pred CCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC--CcEEEEeCCCCCccc
Q psy4974 247 DVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCH 324 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~ 324 (345)
.. ..... ...+..... .....+.++++|+|+|+|++|.++|++.++.+.+.++ ++++++++++||.++
T Consensus 193 ~~-~~~~~----~~~~~~~~~-----~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~ 262 (281)
T 4fbl_A 193 PV-TPVPA----IKHLITIGA-----VAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVAT 262 (281)
T ss_dssp SE-EEGGG----HHHHHHHHH-----HHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGG
T ss_pred cc-CchHH----HHHHHHhhh-----hccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCc
Confidence 00 00000 111111111 1134467789999999999999999999999999885 458999999999998
Q ss_pred cc-ChHHHHHHHHHHHHhh
Q psy4974 325 IK-HGQVFNEISRNFILEE 342 (345)
Q Consensus 325 ~~-~~~~~~~~i~~fl~~~ 342 (345)
.+ +++++.+.|.+||+++
T Consensus 263 ~e~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 263 LDNDKELILERSLAFIRKH 281 (281)
T ss_dssp GSTTHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHHHHhC
Confidence 87 5899999999999875
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=231.97 Aligned_cols=247 Identities=15% Similarity=0.159 Sum_probs=176.9
Q ss_pred cceeeeEEEcCceEEEEEcCC-CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC
Q psy4974 71 VFTEGFFSIKGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 71 ~~~~~~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
.+++.+++.+|..++|..+++ +.|+||++||++++. ..|..+++.|.++||+|+++|+|| +|.|.
T Consensus 3 ~~~~~~~~~~g~~l~~~~~g~~~~~~vv~~hG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G-------------~G~s~ 68 (286)
T 3qit_A 3 AMEEKFLEFGGNQICLCSWGSPEHPVVLCIHGILEQG-LAWQEVALPLAAQGYRVVAPDLFG-------------HGRSS 68 (286)
T ss_dssp CCEEEEEEETTEEEEEEEESCTTSCEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTT-------------STTSC
T ss_pred hhhhheeecCCceEEEeecCCCCCCEEEEECCCCccc-chHHHHHHHhhhcCeEEEEECCCC-------------CCCCC
Confidence 356788999999999999986 348999999999995 999999999999999999999999 99998
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh-----HHHHH
Q psy4974 150 PKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN-----VRVFE 224 (345)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-----~~~~~ 224 (345)
.+... ...++.++++++.++++.++.++++++|||+||.+|+.+|.++|++|+++|++++........ .....
T Consensus 69 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 146 (286)
T 3qit_A 69 HLEMV--TSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTT 146 (286)
T ss_dssp CCSSG--GGCSHHHHHHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHH
T ss_pred CCCCC--CCcCHHHHHHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHH
Confidence 66521 222678889999999999999999999999999999999999999999999999876643322 11111
Q ss_pred HhHhccCCC-----hhhHH---HHHHHcccCCchhhhhHHHHHHHHH-----------------HHHHhh-----Cchhh
Q psy4974 225 GMRRLSNWS-----PMARS---EVLKAYDNDVNYITGIFNQYVDMVN-----------------LIFKSY-----GRNVY 274 (345)
Q Consensus 225 ~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~-----~~~~~ 274 (345)
.+....... ..... ....... . .............. ...... ...+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (286)
T 3qit_A 147 CLDYLSSTPQHPIFPDVATAASRLRQAIP-S--LSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQY 223 (286)
T ss_dssp HHHHHTCCCCCCCBSSHHHHHHHHHHHST-T--SCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHH
T ss_pred HHHHHhccccccccccHHHHHHHhhcCCc-c--cCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHH
Confidence 111111100 00000 0000000 0 01111110000000 000000 11122
Q ss_pred hccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHH
Q psy4974 275 QELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRN 337 (345)
Q Consensus 275 ~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 337 (345)
...+.++++|+++++|++|.++|.+..+.+.+.+++++++++++ ||++++++|+++++.|.+
T Consensus 224 ~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 224 LEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQAKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp HHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHSTTSEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred HHHHhccCCCeEEEEeCCCcccCHHHHHHHHHHCCCCeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 33456789999999999999999999999999999999999998 999999999999998864
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-31 Score=228.10 Aligned_cols=239 Identities=15% Similarity=0.152 Sum_probs=171.8
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
..++..+|.+++|...|++ |+||++||++++. ..|..+++.|+ .||+|+++|+|| ||.|+.+.
T Consensus 5 ~~~~~~~g~~l~~~~~g~~-~~vv~lHG~~~~~-~~~~~~~~~l~-~~~~vi~~d~~G-------------~G~S~~~~- 67 (262)
T 3r0v_A 5 QTVPSSDGTPIAFERSGSG-PPVVLVGGALSTR-AGGAPLAERLA-PHFTVICYDRRG-------------RGDSGDTP- 67 (262)
T ss_dssp CEEECTTSCEEEEEEEECS-SEEEEECCTTCCG-GGGHHHHHHHT-TTSEEEEECCTT-------------STTCCCCS-
T ss_pred heEEcCCCcEEEEEEcCCC-CcEEEECCCCcCh-HHHHHHHHHHh-cCcEEEEEecCC-------------CcCCCCCC-
Confidence 3456669999999999876 5899999999995 99999999999 679999999999 99998764
Q ss_pred CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh----HHHHHHhHhc
Q psy4974 154 SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN----VRVFEGMRRL 229 (345)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~----~~~~~~~~~~ 229 (345)
.+ +++++++++.++++.++ ++++++|||+||.+|+.+|.++| +|+++|++++........ ......+...
T Consensus 68 ~~----~~~~~~~~~~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (262)
T 3r0v_A 68 PY----AVEREIEDLAAIIDAAG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDAL 141 (262)
T ss_dssp SC----CHHHHHHHHHHHHHHTT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHH
T ss_pred CC----CHHHHHHHHHHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHH
Confidence 44 68888999999999999 99999999999999999999999 999999999876543221 1111111111
Q ss_pred cCC--ChhhHHHHHHHcccCCchhhhhHHHHH------------HHHH-HHHHhhCchhhhccCCCCCCCEEEEEeCCCC
Q psy4974 230 SNW--SPMARSEVLKAYDNDVNYITGIFNQYV------------DMVN-LIFKSYGRNVYQELLPYVDVPVLVFHSADDV 294 (345)
Q Consensus 230 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~ 294 (345)
... .......+....... .......+. ..+. ..............+.++++|+++++|++|.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 218 (262)
T 3r0v_A 142 LAEGRRGDAVTYFMTEGVGV---PPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASP 218 (262)
T ss_dssp HHTTCHHHHHHHHHHHTSCC---CHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCC
T ss_pred hhccchhhHHHHHhhcccCC---CHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCC
Confidence 000 001111111110000 000000000 0000 0000111112245677889999999999999
Q ss_pred CCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 295 MVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 295 ~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
++|.+..+.+.+.++++++++++++|| +++|+++.+.|.+||++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~gH---~~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 219 AWIRHTAQELADTIPNARYVTLENQTH---TVAPDAIAPVLVEFFTR 262 (262)
T ss_dssp HHHHHHHHHHHHHSTTEEEEECCCSSS---SCCHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHhCCCCeEEEecCCCc---ccCHHHHHHHHHHHHhC
Confidence 999999999999999999999999999 36899999999999963
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-31 Score=236.19 Aligned_cols=246 Identities=13% Similarity=0.131 Sum_probs=169.9
Q ss_pred eeeEEEcCceEEEEEcCCCC-ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGA-QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~-p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
..++.++|..++|...|++. |+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+.+.
T Consensus 23 ~~~~~~~g~~l~y~~~G~g~~~~vvllHG~~~~~-~~w~~~~~~L~~~-~~via~Dl~G-------------hG~S~~~~ 87 (318)
T 2psd_A 23 CKQMNVLDSFINYYDSEKHAENAVIFLHGNATSS-YLWRHVVPHIEPV-ARCIIPDLIG-------------MGKSGKSG 87 (318)
T ss_dssp CEEEEETTEEEEEEECCSCTTSEEEEECCTTCCG-GGGTTTGGGTTTT-SEEEEECCTT-------------STTCCCCT
T ss_pred ceEEeeCCeEEEEEEcCCCCCCeEEEECCCCCcH-HHHHHHHHHhhhc-CeEEEEeCCC-------------CCCCCCCC
Confidence 56788899999999998764 5899999999995 9999999999887 8999999999 99998653
Q ss_pred C-CCCCccchHHHHHHHHHHHHHhCC-ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCC------chhHHHHH
Q psy4974 153 R-SFVPFQYIEEDVDIAYELLKLLGV-CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLT------IDNVRVFE 224 (345)
Q Consensus 153 ~-~~~~~~~~~~~~~~~~~~l~~~~~-~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~------~~~~~~~~ 224 (345)
. .| +++++++++.++++.+++ ++++|+||||||.+|+.+|.++|++|+++|++++..... ......+.
T Consensus 88 ~~~~----~~~~~a~dl~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 163 (318)
T 2psd_A 88 NGSY----RLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIA 163 (318)
T ss_dssp TSCC----SHHHHHHHHHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHH
T ss_pred CCcc----CHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHH
Confidence 2 24 688889999999999999 899999999999999999999999999999988532110 00001111
Q ss_pred HhHhc------cCCChhhHHHHHHHcccCCchhhhhHHHHH----------HHHHHHHHhhC------------chhhhc
Q psy4974 225 GMRRL------SNWSPMARSEVLKAYDNDVNYITGIFNQYV----------DMVNLIFKSYG------------RNVYQE 276 (345)
Q Consensus 225 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~------------~~~~~~ 276 (345)
.+... .................. ........+. .....+..... ..+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (318)
T 2psd_A 164 LIKSEEGEKMVLENNFFVETVLPSKIMRK--LEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNA 241 (318)
T ss_dssp HHHSTHHHHHHTTTCHHHHTHHHHTCSSC--CCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHH
T ss_pred HHhcccchhhhhcchHHHHhhcccccccc--CCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHH
Confidence 11000 000000000000000000 0000000000 00000000000 001123
Q ss_pred cCCCC-CCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 277 LLPYV-DVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 277 ~l~~i-~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
.+..+ ++|+|+|+|++| +++. ..+.+.+.+++.+++++ ++||++++|+|+++++.|.+||.+..
T Consensus 242 ~l~~i~~~P~Lvi~G~~D-~~~~-~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~~ 306 (318)
T 2psd_A 242 YLRASDDLPKLFIESDPG-FFSN-AIVEGAKKFPNTEFVKV-KGLHFLQEDAPDEMGKYIKSFVERVL 306 (318)
T ss_dssp HHHTCTTSCEEEEEEEEC-SSHH-HHHHHHTTSSSEEEEEE-EESSSGGGTCHHHHHHHHHHHHHHHH
T ss_pred HhccccCCCeEEEEeccc-cCcH-HHHHHHHhCCCcEEEEe-cCCCCCHhhCHHHHHHHHHHHHHHhh
Confidence 34567 999999999999 8887 88889999999999999 68999999999999999999997653
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-32 Score=234.33 Aligned_cols=249 Identities=15% Similarity=0.130 Sum_probs=177.8
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
..+++++|.+++|...|++ |+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+.+..
T Consensus 10 ~~~~~~~g~~l~~~~~g~~-~~vv~lHG~~~~~-~~~~~~~~~l~~~-~~vi~~D~~G-------------~G~S~~~~~ 73 (297)
T 2qvb_A 10 PKYLEIAGKRMAYIDEGKG-DAIVFQHGNPTSS-YLWRNIMPHLEGL-GRLVACDLIG-------------MGASDKLSP 73 (297)
T ss_dssp CEEEEETTEEEEEEEESSS-SEEEEECCTTCCG-GGGTTTGGGGTTS-SEEEEECCTT-------------STTSCCCSS
T ss_pred ceEEEECCEEEEEEecCCC-CeEEEECCCCchH-HHHHHHHHHHhhc-CeEEEEcCCC-------------CCCCCCCCC
Confidence 6788899999999999976 6999999999995 8999999999887 9999999999 999986644
Q ss_pred C-CCCccchHHHHHHHHHHHHHhCC-ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc------hhHHHHHH
Q psy4974 154 S-FVPFQYIEEDVDIAYELLKLLGV-CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI------DNVRVFEG 225 (345)
Q Consensus 154 ~-~~~~~~~~~~~~~~~~~l~~~~~-~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~------~~~~~~~~ 225 (345)
. . ...+++++++++.++++.++. ++++++||||||.+|+.+|.++|++|+++|++++...... .....+..
T Consensus 74 ~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 152 (297)
T 2qvb_A 74 SGP-DRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQG 152 (297)
T ss_dssp CST-TSSCHHHHHHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHH
T ss_pred ccc-cCcCHHHHHHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHH
Confidence 3 1 112788899999999999999 9999999999999999999999999999999998764211 11111111
Q ss_pred hHhcc------CCChhhHHHHHHHcccCCchhhhhHHHH----------HHHHHHHHHhh-----------CchhhhccC
Q psy4974 226 MRRLS------NWSPMARSEVLKAYDNDVNYITGIFNQY----------VDMVNLIFKSY-----------GRNVYQELL 278 (345)
Q Consensus 226 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~-----------~~~~~~~~l 278 (345)
+.... ................. ........+ .......+... ...+....+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (297)
T 2qvb_A 153 FRSPQGEPMALEHNIFVERVLPGAILRQ--LSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWL 230 (297)
T ss_dssp HTSTTHHHHHHTTCHHHHTHHHHTCSSC--CCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHH
T ss_pred HhcccchhhhccccHHHHHHHhcccccc--CCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhc
Confidence 10000 00000000000000000 000000000 00111111111 011224445
Q ss_pred CCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 279 PYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 279 ~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
.++++|+|+++|++|.++|.+..+.+.+.+++ +++++ ++||+++.++|+++.+.|.+||++..
T Consensus 231 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~~~ 293 (297)
T 2qvb_A 231 EETDMPKLFINAEPGAIITGRIRDYVRSWPNQ-TEITV-PGVHFVQEDSPEEIGAAIAQFVRRLR 293 (297)
T ss_dssp HHCCSCEEEEEEEECSSSCHHHHHHHHTSSSE-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHH
T ss_pred ccccccEEEEecCCCCcCCHHHHHHHHHHcCC-eEEEe-cCccchhhhCHHHHHHHHHHHHHHHh
Confidence 67899999999999999999999999999999 99999 99999999999999999999998753
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-30 Score=228.10 Aligned_cols=247 Identities=17% Similarity=0.220 Sum_probs=174.6
Q ss_pred eEEEcC--ceEEEEEcCC---CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 76 FFSIKG--CDIRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 76 ~~~~~g--~~l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
.+..+| ..++|...++ ..|+|||+||++++. ..|..+++.|.++||+|+++|+|| ||.|+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~p~vv~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G-------------~G~s~~ 89 (315)
T 4f0j_A 24 DFTSQGQPLSMAYLDVAPKKANGRTILLMHGKNFCA-GTWERTIDVLADAGYRVIAVDQVG-------------FCKSSK 89 (315)
T ss_dssp EEEETTEEEEEEEEEECCSSCCSCEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTT-------------STTSCC
T ss_pred EEecCCCCeeEEEeecCCCCCCCCeEEEEcCCCCcc-hHHHHHHHHHHHCCCeEEEeecCC-------------CCCCCC
Confidence 344454 4566666643 347999999999995 899999999999999999999999 999976
Q ss_pred CCC-CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH-----HHHH
Q psy4974 151 KGR-SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV-----RVFE 224 (345)
Q Consensus 151 ~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-----~~~~ 224 (345)
+.. .+ ++++.++++.++++.++.++++|+|||+||.+|+.+|.++|++|+++|++++......... ....
T Consensus 90 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 165 (315)
T 4f0j_A 90 PAHYQY----SFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDD 165 (315)
T ss_dssp CSSCCC----CHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHH
T ss_pred CCcccc----CHHHHHHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHH
Confidence 654 33 7888899999999999999999999999999999999999999999999998654321110 0000
Q ss_pred HhHhccCCCh-hhHHHHHHHcccCCchhhhhHHHHHHHHHH----------------HHHhhCchhhhccCCCCCCCEEE
Q psy4974 225 GMRRLSNWSP-MARSEVLKAYDNDVNYITGIFNQYVDMVNL----------------IFKSYGRNVYQELLPYVDVPVLV 287 (345)
Q Consensus 225 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~i~~Pvl~ 287 (345)
.......... .........+... ........+...... ........+....+.++++|+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~li 243 (315)
T 4f0j_A 166 WYRRDLQTSAEGIRQYQQATYYAG--EWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLL 243 (315)
T ss_dssp HHHHHTTCCHHHHHHHHHHHTSTT--CCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEE
T ss_pred HHhhcccCChHHHHHHHHHHHhcc--ccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEE
Confidence 1111111111 1111111111111 011111111111110 11111122234567788999999
Q ss_pred EEeCCCCCCC----------------hHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 288 FHSADDVMVS----------------TQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 288 i~G~~D~~v~----------------~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
++|++|.++| .+..+.+.+.++++++++++++||+++.++|+++++.|.+||+++
T Consensus 244 i~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 244 LIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQAPERFHQALLEGLQTQ 314 (315)
T ss_dssp EEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHHHHSHHHHHHHHHHHHCC-
T ss_pred EEecCCCcCccccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchhhhCHHHHHHHHHHHhccC
Confidence 9999999999 788899999999999999999999999999999999999999764
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.98 E-value=7.6e-32 Score=231.20 Aligned_cols=234 Identities=18% Similarity=0.192 Sum_probs=158.4
Q ss_pred eEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchH
Q psy4974 83 DIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIE 162 (345)
Q Consensus 83 ~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~ 162 (345)
+++|...|+++++|||+||++++. ..|..+++.|++ +|+|+++|+|| ||.|+.+ ..+ +++
T Consensus 3 ~l~~~~~G~g~~~vvllHG~~~~~-~~w~~~~~~L~~-~~~vi~~Dl~G-------------~G~S~~~-~~~----~~~ 62 (258)
T 1m33_A 3 NIWWQTKGQGNVHLVLLHGWGLNA-EVWRCIDEELSS-HFTLHLVDLPG-------------FGRSRGF-GAL----SLA 62 (258)
T ss_dssp CCCEEEECCCSSEEEEECCTTCCG-GGGGGTHHHHHT-TSEEEEECCTT-------------STTCCSC-CCC----CHH
T ss_pred ceEEEEecCCCCeEEEECCCCCCh-HHHHHHHHHhhc-CcEEEEeeCCC-------------CCCCCCC-CCc----CHH
Confidence 578888887743899999999995 999999999986 59999999999 9999876 444 566
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh------HHHHHHhHhccCCChhh
Q psy4974 163 EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN------VRVFEGMRRLSNWSPMA 236 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 236 (345)
++++++.+ .++ ++++|+||||||.+|+.+|.++|++|+++|++++.+...... ........... ....
T Consensus 63 ~~~~~l~~---~l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 136 (258)
T 1m33_A 63 DMAEAVLQ---QAP-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQL--SDDQ 136 (258)
T ss_dssp HHHHHHHT---TSC-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHH--HHHH
T ss_pred HHHHHHHH---HhC-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHH--hccH
Confidence 66665544 445 799999999999999999999999999999998754321110 00000000000 0000
Q ss_pred HHHHHHHcccC---CchhhhhHHHHH-----------HHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHH
Q psy4974 237 RSEVLKAYDND---VNYITGIFNQYV-----------DMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQ 302 (345)
Q Consensus 237 ~~~~~~~~~~~---~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~ 302 (345)
......++... ............ ..+..........+....+.++++|+++|+|++|.++|.+..+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~ 216 (258)
T 1m33_A 137 QRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVP 216 (258)
T ss_dssp HHHHHHHHHTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC
T ss_pred HHHHHHHHHHHhcCCccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHH
Confidence 00011111000 000000000000 0011111111112234456778999999999999999998888
Q ss_pred HHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 303 SLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
.+.+.++++++++++++||++++|+|+++++.|.+||.+.
T Consensus 217 ~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 217 MLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQRV 256 (258)
T ss_dssp -CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred HHHHhCccceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 8888889999999999999999999999999999999764
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.98 E-value=7.9e-32 Score=234.79 Aligned_cols=244 Identities=16% Similarity=0.228 Sum_probs=178.5
Q ss_pred EEcCceEEEEEcCCCCceEEEEcCcCCCchhhHH-HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 78 SIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFK-KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 78 ~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~-~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
+++|.+++|...|++ |+|||+||++++. ..|. .++..|.+.||+|+++|+|| +|.|..+. .+
T Consensus 29 ~~~~~~l~y~~~g~~-~~vv~lHG~~~~~-~~~~~~~~~~l~~~g~~vi~~D~~G-------------~G~s~~~~-~~- 91 (293)
T 3hss_A 29 EFRVINLAYDDNGTG-DPVVFIAGRGGAG-RTWHPHQVPAFLAAGYRCITFDNRG-------------IGATENAE-GF- 91 (293)
T ss_dssp TSCEEEEEEEEECSS-EEEEEECCTTCCG-GGGTTTTHHHHHHTTEEEEEECCTT-------------SGGGTTCC-SC-
T ss_pred ccccceEEEEEcCCC-CEEEEECCCCCch-hhcchhhhhhHhhcCCeEEEEccCC-------------CCCCCCcc-cC-
Confidence 457889999999965 6999999999995 8898 67888877789999999999 99886553 33
Q ss_pred CccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHh----ccCC
Q psy4974 157 PFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRR----LSNW 232 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~----~~~~ 232 (345)
++++.++++.++++.++.++++++|||+||.+|+.+|.++|++|+++|++++................. ....
T Consensus 92 ---~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (293)
T 3hss_A 92 ---TTQTMVADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQL 168 (293)
T ss_dssp ---CHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCC
T ss_pred ---CHHHHHHHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccc
Confidence 788889999999999999999999999999999999999999999999999987654332221111111 1111
Q ss_pred ChhhHHHH--HHHcccCCchhh--hhHHHHHH-----------HHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCC
Q psy4974 233 SPMARSEV--LKAYDNDVNYIT--GIFNQYVD-----------MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVS 297 (345)
Q Consensus 233 ~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~ 297 (345)
........ ...+... ... .....+.. .+..........+....+.++++|+++++|++|.++|
T Consensus 169 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~ 246 (293)
T 3hss_A 169 PPTYDARARLLENFSRK--TLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTP 246 (293)
T ss_dssp CHHHHHHHHHHHHSCHH--HHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSC
T ss_pred hhhHHHHHHHhhhcccc--cccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCC
Confidence 11111110 0111100 000 00011111 1111111222233345567899999999999999999
Q ss_pred hHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 298 TQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
.+..+.+.+.++++++++++++||+++.++|+++.+.|.+||++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~ 292 (293)
T 3hss_A 247 PYLGREVADALPNGRYLQIPDAGHLGFFERPEAVNTAMLKFFASVK 292 (293)
T ss_dssp HHHHHHHHHHSTTEEEEEETTCCTTHHHHSHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCceEEEeCCCcchHhhhCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999998753
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.98 E-value=8.4e-31 Score=227.97 Aligned_cols=249 Identities=12% Similarity=0.129 Sum_probs=172.3
Q ss_pred eeeeEEEcCceEEEEEcCC---CCceEEEEcCcCCCchh-hHHH-----HHHhhCCCCeEEEEeCCCCchhhhccCCccC
Q psy4974 73 TEGFFSIKGCDIRFIKYGS---GAQVLFFTYGVLGEIRN-SFKK-----QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCS 143 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~-~~~~-----~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~ 143 (345)
..+.+..+|.+++|...|+ ++|+|||+||++++. . .|.. +++.|++. |+|+++|+||
T Consensus 12 ~~~~~~~~~~~l~y~~~G~~~~~~p~vvllHG~~~~~-~~~~~~~~~~~~~~~L~~~-~~vi~~D~~G------------ 77 (286)
T 2qmq_A 12 HTHSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNY-KSCFQPLFRFGDMQEIIQN-FVRVHVDAPG------------ 77 (286)
T ss_dssp EEEEEEETTEEEEEEEESCCCTTCCEEEEECCTTCCH-HHHHHHHHTSHHHHHHHTT-SCEEEEECTT------------
T ss_pred cccccccCCeEEEEEeccCCCCCCCeEEEeCCCCCCc-hhhhhhhhhhchhHHHhcC-CCEEEecCCC------------
Confidence 3566778999999999996 458999999999995 5 3665 78888875 9999999999
Q ss_pred CCCCCCCCC-CCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHH
Q psy4974 144 GYGQSLPKG-RSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRV 222 (345)
Q Consensus 144 ~~G~s~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 222 (345)
||.|.... ..+ ...+++++++++.++++.++.++++|+|||+||.+|+.+|.++|++|+++|++++...........
T Consensus 78 -~G~s~~~~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 155 (286)
T 2qmq_A 78 -MEEGAPVFPLGY-QYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWA 155 (286)
T ss_dssp -TSTTCCCCCTTC-CCCCHHHHHHTHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHHHHH
T ss_pred -CCCCCCCCCCCC-CccCHHHHHHHHHHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchhhhh
Confidence 99875432 221 113788999999999999999999999999999999999999999999999999976543322211
Q ss_pred HHHhHhccCCChhhHHHHHHHcccC-----CchhhhhHH--------HHHHHHHHHHHhhCchh-hhccCCCCCCCEEEE
Q psy4974 223 FEGMRRLSNWSPMARSEVLKAYDND-----VNYITGIFN--------QYVDMVNLIFKSYGRNV-YQELLPYVDVPVLVF 288 (345)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--------~~~~~~~~~~~~~~~~~-~~~~l~~i~~Pvl~i 288 (345)
....... ............+... ......... .....+...+....... ....+.++++|+|+|
T Consensus 156 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 233 (286)
T 2qmq_A 156 AHKLTGL--TSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLV 233 (286)
T ss_dssp HHHHHHT--TSCHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEE
T ss_pred hhhhccc--cccchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEE
Confidence 1111110 0011111111111111 000000000 00111111222111111 134566889999999
Q ss_pred EeCCCCCCChHHHHHHHhhcC-CcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 289 HSADDVMVSTQQVQSLLNQLK-FCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 289 ~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
+|++|.++| ...+.+.+..+ ++++++++++||+++.++|+++.+.|.+||+
T Consensus 234 ~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 234 VGDQAPHED-AVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp EETTSTTHH-HHHHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHHHHHHC
T ss_pred ecCCCcccc-HHHHHHHHhcCCCceEEEeCCCCCcccccChHHHHHHHHHHhc
Confidence 999999998 45666666666 8999999999999999999999999999995
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-31 Score=230.92 Aligned_cols=244 Identities=17% Similarity=0.176 Sum_probs=174.3
Q ss_pred eEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchH
Q psy4974 83 DIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIE 162 (345)
Q Consensus 83 ~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~ 162 (345)
.++|...|+++|+|||+||++++. ..|..+++.|++ ||+|+++|+|| ||.|..+........+++
T Consensus 18 ~~~~~~~g~~~~~vv~lHG~~~~~-~~~~~~~~~l~~-g~~v~~~d~~G-------------~G~s~~~~~~~~~~~~~~ 82 (282)
T 3qvm_A 18 RNNINITGGGEKTVLLAHGFGCDQ-NMWRFMLPELEK-QFTVIVFDYVG-------------SGQSDLESFSTKRYSSLE 82 (282)
T ss_dssp HTTCEEEECSSCEEEEECCTTCCG-GGGTTTHHHHHT-TSEEEECCCTT-------------STTSCGGGCCTTGGGSHH
T ss_pred hcceeecCCCCCeEEEECCCCCCc-chHHHHHHHHhc-CceEEEEecCC-------------CCCCCCCCCCccccccHH
Confidence 445666777778999999999995 999999999988 79999999999 999976542210233788
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh--------HHHHH-HhHhccCCC
Q psy4974 163 EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN--------VRVFE-GMRRLSNWS 233 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--------~~~~~-~~~~~~~~~ 233 (345)
+.++++.++++.++.++++|+|||+||.+|+.+|.++|++|+++|++++........ ..... .........
T Consensus 83 ~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T 3qvm_A 83 GYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNY 162 (282)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHcCCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcch
Confidence 999999999999999999999999999999999999999999999999876533221 00000 000000000
Q ss_pred hhhHHHHHH-HcccCCchhhhhHHHHH--------HHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHH
Q psy4974 234 PMARSEVLK-AYDNDVNYITGIFNQYV--------DMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSL 304 (345)
Q Consensus 234 ~~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~ 304 (345)
......+.. .+... .......... .............+....+.++++|+++++|++|.++|.+..+.+
T Consensus 163 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 240 (282)
T 3qvm_A 163 IGWANYLAPLVMGAS--HSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYM 240 (282)
T ss_dssp HHHHHHHHHHHHCTT--SCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHH
T ss_pred hhHHHHHHhhccCCc--cchhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHH
Confidence 001111111 11111 0011111110 111122222223334566778899999999999999999999999
Q ss_pred HhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 305 LNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 305 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
.+.+++.++++++++||+++.++|+++.+.|.+||++..
T Consensus 241 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 241 AENIPNSQLELIQAEGHCLHMTDAGLITPLLIHFIQNNQ 279 (282)
T ss_dssp HHHSSSEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHC-
T ss_pred HHhCCCCcEEEecCCCCcccccCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999998764
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.8e-31 Score=233.47 Aligned_cols=249 Identities=14% Similarity=0.091 Sum_probs=178.4
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
..++..+|.+++|...|++ |+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+.+..
T Consensus 11 ~~~~~~~g~~l~~~~~g~~-~~vv~lHG~~~~~-~~~~~~~~~L~~~-~~vi~~D~~G-------------~G~S~~~~~ 74 (302)
T 1mj5_A 11 KKFIEIKGRRMAYIDEGTG-DPILFQHGNPTSS-YLWRNIMPHCAGL-GRLIACDLIG-------------MGDSDKLDP 74 (302)
T ss_dssp CEEEEETTEEEEEEEESCS-SEEEEECCTTCCG-GGGTTTGGGGTTS-SEEEEECCTT-------------STTSCCCSS
T ss_pred ceEEEECCEEEEEEEcCCC-CEEEEECCCCCch-hhhHHHHHHhccC-CeEEEEcCCC-------------CCCCCCCCC
Confidence 5678889999999999875 6999999999995 9999999999987 8999999999 999986654
Q ss_pred C-CCCccchHHHHHHHHHHHHHhCC-ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc------hhHHHHHH
Q psy4974 154 S-FVPFQYIEEDVDIAYELLKLLGV-CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI------DNVRVFEG 225 (345)
Q Consensus 154 ~-~~~~~~~~~~~~~~~~~l~~~~~-~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~------~~~~~~~~ 225 (345)
. . ...+++++++++.++++.++. ++++++|||+||.+|+.+|.++|++|+++|++++...... .....+..
T Consensus 75 ~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 153 (302)
T 1mj5_A 75 SGP-ERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQA 153 (302)
T ss_dssp CST-TSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHH
T ss_pred CCc-ccccHHHHHHHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHH
Confidence 3 1 112788899999999999999 9999999999999999999999999999999998764211 11111111
Q ss_pred hHhc------cCCChhhHHHHHHHcccCCchhhhhHHHHH----------HHHHHHHHhh-----------CchhhhccC
Q psy4974 226 MRRL------SNWSPMARSEVLKAYDNDVNYITGIFNQYV----------DMVNLIFKSY-----------GRNVYQELL 278 (345)
Q Consensus 226 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~-----------~~~~~~~~l 278 (345)
+... .................. ........+. ......+... ...+....+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 231 (302)
T 1mj5_A 154 FRSQAGEELVLQDNVFVEQVLPGLILRP--LSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWL 231 (302)
T ss_dssp HHSTTHHHHHTTTCHHHHTHHHHTSSSC--CCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHH
T ss_pred HhccchhhhhcChHHHHHHHHHhcCccc--CCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhh
Confidence 1100 000000000000000000 0000000000 0000000000 011234556
Q ss_pred CCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 279 PYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 279 ~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
.++++|+|+|+|++|.++|.+..+.+.+.+++ +++++ ++||+++.++|+++++.|.+|+.+..
T Consensus 232 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~~ 294 (302)
T 1mj5_A 232 SESPIPKLFINAEPGALTTGRMRDFCRTWPNQ-TEITV-AGAHFIQEDSPDEIGAAIAAFVRRLR 294 (302)
T ss_dssp TTCCSCEEEEEEEECSSSSHHHHHHHTTCSSE-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHS
T ss_pred hccCCCeEEEEeCCCCCCChHHHHHHHHhcCC-ceEEe-cCcCcccccCHHHHHHHHHHHHHhhc
Confidence 78899999999999999999999999999999 99999 99999999999999999999998764
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=226.61 Aligned_cols=233 Identities=14% Similarity=0.164 Sum_probs=166.6
Q ss_pred eEEEcCceEEEEEcCC-----CCceEEEEcCcCCC--chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCC
Q psy4974 76 FFSIKGCDIRFIKYGS-----GAQVLFFTYGVLGE--IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS 148 (345)
Q Consensus 76 ~~~~~g~~l~~~~~g~-----~~p~vv~lHG~~~~--~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s 148 (345)
.+..+|.++++..+.+ ..|+||++||++++ . ..|..+++.|+++||+|+++|+|| ||.|
T Consensus 5 ~~~~~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G-------------~G~S 70 (251)
T 2wtm_A 5 YIDCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEE-RHIVAVQETLNEIGVATLRADMYG-------------HGKS 70 (251)
T ss_dssp EEEETTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTS-HHHHHHHHHHHHTTCEEEEECCTT-------------STTS
T ss_pred EEecCCcEEEEEEEccCCCCCCCCEEEEEcCCCccccc-ccHHHHHHHHHHCCCEEEEecCCC-------------CCCC
Confidence 3456899998876542 23689999999998 6 889999999998899999999999 9999
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHHhC----CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHH
Q psy4974 149 LPKGRSFVPFQYIEEDVDIAYELLKLLG----VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFE 224 (345)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 224 (345)
+.....+ ++.+.++|+.++++.+. .++++|+||||||.+|+.+|.++|++|+++|+++|....... ...
T Consensus 71 ~~~~~~~----~~~~~~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---~~~ 143 (251)
T 2wtm_A 71 DGKFEDH----TLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEI---ART 143 (251)
T ss_dssp SSCGGGC----CHHHHHHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHH---HHH
T ss_pred CCccccC----CHHHHHHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHH---Hhh
Confidence 7643333 56777888888888874 468999999999999999999999999999999986432110 000
Q ss_pred HhHhccCCChhhHHHHHHHcccCCchhh-hhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHH
Q psy4974 225 GMRRLSNWSPMARSEVLKAYDNDVNYIT-GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQS 303 (345)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~ 303 (345)
.......+.... ....+. . +.. .....+.. .....+....+.++++|+|+++|++|.++|.+.++.
T Consensus 144 ~~~~~~~~~~~~---~~~~~~-~--~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~ 210 (251)
T 2wtm_A 144 GELLGLKFDPEN---IPDELD-A--WDGRKLKGNYVR-------VAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVA 210 (251)
T ss_dssp TEETTEECBTTB---CCSEEE-E--TTTEEEETHHHH-------HHTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHH
T ss_pred hhhccccCCchh---cchHHh-h--hhccccchHHHH-------HHHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHH
Confidence 000000000000 000000 0 000 00000111 111112233455678999999999999999999999
Q ss_pred HHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 304 LLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 304 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+.+.++++++++++++||++ .++|+++.+.|.+||++..
T Consensus 211 ~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~~ 249 (251)
T 2wtm_A 211 FSKQYKNCKLVTIPGDTHCY-DHHLELVTEAVKEFMLEQI 249 (251)
T ss_dssp HHHHSSSEEEEEETTCCTTC-TTTHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCcEEEEECCCCccc-chhHHHHHHHHHHHHHHhc
Confidence 99999999999999999999 9999999999999998764
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=236.98 Aligned_cols=244 Identities=13% Similarity=0.116 Sum_probs=172.7
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC-
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG- 152 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~- 152 (345)
.....+++..++|..+|++.|+|||+||++++. ..|..++..| ||+|+++|+|| +|.|+.+.
T Consensus 62 ~~~~~~~~~~~~~~~~g~~~~~vv~~hG~~~~~-~~~~~~~~~l---g~~Vi~~D~~G-------------~G~S~~~~~ 124 (330)
T 3p2m_A 62 PEVERVQAGAISALRWGGSAPRVIFLHGGGQNA-HTWDTVIVGL---GEPALAVDLPG-------------HGHSAWRED 124 (330)
T ss_dssp CCEEEEEETTEEEEEESSSCCSEEEECCTTCCG-GGGHHHHHHS---CCCEEEECCTT-------------STTSCCCSS
T ss_pred CCceeecCceEEEEEeCCCCCeEEEECCCCCcc-chHHHHHHHc---CCeEEEEcCCC-------------CCCCCCCCC
Confidence 345567888999999998888999999999995 8999999888 79999999999 99998443
Q ss_pred CCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhc---
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRL--- 229 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~--- 229 (345)
..+ +++++++++.++++.++.++++|+|||+||.+|+.+|.++|++|+++|++++..................
T Consensus 125 ~~~----~~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 200 (330)
T 3p2m_A 125 GNY----SPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVAL 200 (330)
T ss_dssp CBC----CHHHHHHHHHHHHHHSSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-------
T ss_pred CCC----CHHHHHHHHHHHHHHhCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhh
Confidence 333 6788899999999999999999999999999999999999999999999998543211111000000000
Q ss_pred ---cCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhh----------------CchhhhccCCCCCCCEEEEEe
Q psy4974 230 ---SNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSY----------------GRNVYQELLPYVDVPVLVFHS 290 (345)
Q Consensus 230 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~i~~Pvl~i~G 290 (345)
................... ..........+....... ........+.++++|+|+|+|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G 277 (330)
T 3p2m_A 201 MHGEREFPSFQAMLDLTIAAAP---HRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRG 277 (330)
T ss_dssp ----CCBSCHHHHHHHHHHHCT---TSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEE
T ss_pred hcCCccccCHHHHHHHHHhcCC---CCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEe
Confidence 0000001111111100000 000000000000000000 000112345578999999999
Q ss_pred CCCCCCChHHHHHHHhhcCCcE-EEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 291 ADDVMVSTQQVQSLLNQLKFCQ-YYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 291 ~~D~~v~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
++|.++|.+.++.+.+.+++.+ +++++++||+++.++|+++++.|.+||++
T Consensus 278 ~~D~~v~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 278 GSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp TTCCSSCHHHHHHHHHHCSSEEEEEEETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHhCCCCeeEEEeCCCCCCcchhCHHHHHHHHHHHHhc
Confidence 9999999999999999999999 99999999999999999999999999975
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=226.51 Aligned_cols=253 Identities=14% Similarity=0.154 Sum_probs=169.3
Q ss_pred ceeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 72 FTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 72 ~~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
.+..+++++|.+++|...|++ |+|||+||++++. ..|..+++.|++ +|+|+++|+|| ||.|+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~g~g-~~~vllHG~~~~~-~~w~~~~~~l~~-~~~vi~~Dl~G-------------~G~s~~~ 68 (291)
T 3qyj_A 5 FEQTIVDTTEARINLVKAGHG-APLLLLHGYPQTH-VMWHKIAPLLAN-NFTVVATDLRG-------------YGDSSRP 68 (291)
T ss_dssp CEEEEEECSSCEEEEEEECCS-SEEEEECCTTCCG-GGGTTTHHHHTT-TSEEEEECCTT-------------STTSCCC
T ss_pred cceeEEecCCeEEEEEEcCCC-CeEEEECCCCCCH-HHHHHHHHHHhC-CCEEEEEcCCC-------------CCCCCCC
Confidence 346788899999999999977 4899999999995 999999999986 59999999999 9999866
Q ss_pred CCCC-CCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh---HHHHHHh-
Q psy4974 152 GRSF-VPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN---VRVFEGM- 226 (345)
Q Consensus 152 ~~~~-~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~~~~~- 226 (345)
.... ....+.+.+++++.++++.++.++++++||||||.+|+.+|.++|++|+++|++++.+...... .......
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~ 148 (291)
T 3qyj_A 69 ASVPHHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYY 148 (291)
T ss_dssp CCCGGGGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCHHHHHHTT
T ss_pred CCCccccccCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchhhhhHHHH
Confidence 4320 0112678889999999999999999999999999999999999999999999998753211000 0000000
Q ss_pred Hh-ccCCCh------------hhHHHHHHHcccC-CchhhhhHHHHHH---------HHHHHHHhhCc----hhhhccCC
Q psy4974 227 RR-LSNWSP------------MARSEVLKAYDND-VNYITGIFNQYVD---------MVNLIFKSYGR----NVYQELLP 279 (345)
Q Consensus 227 ~~-~~~~~~------------~~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~----~~~~~~l~ 279 (345)
.. ...... ............. ..+.......+.. .....++.... .+....+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (291)
T 3qyj_A 149 HWFFLIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDELDMKQ 228 (291)
T ss_dssp HHHHTTCSTTHHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHHHHHHHTTTTC
T ss_pred HHHHhccCCCchHHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccccchhhcchhcCC
Confidence 00 000000 0000111110110 0011111111111 11111211111 11223567
Q ss_pred CCCCCEEEEEeCCCCCCCh-HHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 280 YVDVPVLVFHSADDVMVST-QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 280 ~i~~Pvl~i~G~~D~~v~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
++++|+|+|+|++|.+.+. .....+.+..++.+..+++ +||+++.|+|+++++.|.+||..
T Consensus 229 ~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~GH~~~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 229 KISCPVLVLWGEKGIIGRKYDVLATWRERAIDVSGQSLP-CGHFLPEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp CBCSCEEEEEETTSSHHHHSCHHHHHHTTBSSEEEEEES-SSSCHHHHSHHHHHHHHHHHHHC
T ss_pred ccccceEEEecccccccchhhHHHHHHhhcCCcceeecc-CCCCchhhCHHHHHHHHHHHHhc
Confidence 8999999999999975432 2345556666788888886 99999999999999999999974
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=233.52 Aligned_cols=253 Identities=13% Similarity=0.073 Sum_probs=176.5
Q ss_pred eeeEEEcCceEEEEEcCC---CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
..++..+|.+++|...|+ ..|+|||+||++++. ..|..+++.|+++||+|+++|+|| ||.|..
T Consensus 5 ~~~~~~~g~~l~y~~~G~~~~~~~~vv~~hG~~~~~-~~~~~~~~~l~~~g~~vi~~d~~g-------------~g~s~~ 70 (356)
T 2e3j_A 5 HRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESW-YSWRHQIPALAGAGYRVVAIDQRG-------------YGRSSK 70 (356)
T ss_dssp EEEEEETTEEEEEEEECCTTCCSCEEEEECCTTCCG-GGGTTTHHHHHHTTCEEEEECCTT-------------STTSCC
T ss_pred EEEEccCCeEEEEEEecCCCCCCCEEEEECCCCCcH-HHHHHHHHHHHHcCCEEEEEcCCC-------------CCCCCC
Confidence 567788999999999984 457999999999995 999999999988899999999999 999976
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCC----------CCC--ch
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS----------FLT--ID 218 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~----------~~~--~~ 218 (345)
+... ...++.++++++.++++.++.++++++|||+||.+|+.+|.++|++|+++|+++++. ... ..
T Consensus 71 ~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 148 (356)
T 2e3j_A 71 YRVQ--KAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPFGERR 148 (356)
T ss_dssp CCSG--GGGSHHHHHHHHHHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCGGGSSCCSSCSSCCSC
T ss_pred CCcc--cccCHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcccccccccCCCCCccccc
Confidence 5431 123678889999999999999999999999999999999999999999999999765 111 00
Q ss_pred hHHHHHHh-----------HhccCC-----ChhhHHHHHHHccc------------------------------------
Q psy4974 219 NVRVFEGM-----------RRLSNW-----SPMARSEVLKAYDN------------------------------------ 246 (345)
Q Consensus 219 ~~~~~~~~-----------~~~~~~-----~~~~~~~~~~~~~~------------------------------------ 246 (345)
....+... ...... .......+...+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (356)
T 2e3j_A 149 PSDYHLELAGPGRVWYQDYFAVQDGIITEIEEDLRGWLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAGPLCM 228 (356)
T ss_dssp HHHHHHSSSCSSEEEHHHHHHHCSHHHHHHHTTHHHHHHHHHHHTSHHHHHHHHHCCC-------CCCGGGTSTTSTTEE
T ss_pred chHHHHHhhcCCcHHHHHHHhcccchHHHHHHhHHHHHHHHhhccccchhhccchhhccccccccccccccccccccccc
Confidence 11111000 000000 00001111111100
Q ss_pred --CCchh--------------hhhHHHHHHHHH--------HHHHhhC-chhh--hccCCCCCCCEEEEEeCCCCCCCh-
Q psy4974 247 --DVNYI--------------TGIFNQYVDMVN--------LIFKSYG-RNVY--QELLPYVDVPVLVFHSADDVMVST- 298 (345)
Q Consensus 247 --~~~~~--------------~~~~~~~~~~~~--------~~~~~~~-~~~~--~~~l~~i~~Pvl~i~G~~D~~v~~- 298 (345)
...+. ......+...+. ..+.... .... ...+..+++|+|+|+|++|.++|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~p~~ 308 (356)
T 2e3j_A 229 AEGARLKDAFVYPETMPAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQYDVGTIWG 308 (356)
T ss_dssp ETTSCGGGGCCCCSSCCTTSCHHHHHHHHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTSCCCSCEEEEEETTCHHHHHT
T ss_pred ccchhhhhcccccccccccCCHHHHHHHHHHhcccCCchhHHHHHhcccChhhhHhhcCCccCCCEEEEecCCCcccccc
Confidence 00000 001111111110 0010000 0000 113578999999999999999984
Q ss_pred -HHHHHHHhhcCCc-EEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 299 -QQVQSLLNQLKFC-QYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 299 -~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+..+.+.+.+|++ ++++++++||+++.|+|+++++.|.+||++.
T Consensus 309 ~~~~~~l~~~~p~~~~~~~i~~aGH~~~~e~p~~~~~~i~~fl~~~ 354 (356)
T 2e3j_A 309 AQAIERAHEVMPNYRGTHMIADVGHWIQQEAPEETNRLLLDFLGGL 354 (356)
T ss_dssp HHHHHTHHHHCTTEEEEEEESSCCSCHHHHSHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhCcCcceEEEecCcCcccchhCHHHHHHHHHHHHhhc
Confidence 8889999999998 9999999999999999999999999999865
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-31 Score=227.56 Aligned_cols=225 Identities=9% Similarity=-0.002 Sum_probs=154.6
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
+.|+|||+||++++. ..|..+++.|+++||+|+++|+|| ||.|+.+.. ...+++++++++.++
T Consensus 9 ~g~~vvllHG~~~~~-~~w~~~~~~L~~~g~~via~Dl~G-------------~G~S~~~~~---~~~~~~~~a~dl~~~ 71 (264)
T 2wfl_A 9 QQKHFVLVHGGCLGA-WIWYKLKPLLESAGHKVTAVDLSA-------------AGINPRRLD---EIHTFRDYSEPLMEV 71 (264)
T ss_dssp CCCEEEEECCTTCCG-GGGTTHHHHHHHTTCEEEEECCTT-------------STTCSCCGG---GCCSHHHHHHHHHHH
T ss_pred CCCeEEEECCCcccc-chHHHHHHHHHhCCCEEEEeecCC-------------CCCCCCCcc---cccCHHHHHHHHHHH
Confidence 346999999999885 899999999987789999999999 999975432 122788899999999
Q ss_pred HHHhC-CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc-hhHHHHHHhHh-cc--CCC-------------
Q psy4974 172 LKLLG-VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI-DNVRVFEGMRR-LS--NWS------------- 233 (345)
Q Consensus 172 l~~~~-~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~-~~--~~~------------- 233 (345)
+++++ .++++|+||||||.+++.+|.++|++|+++|++++...... ........... .. .+.
T Consensus 72 l~~l~~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T 2wfl_A 72 MASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENP 151 (264)
T ss_dssp HHHSCTTCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSC
T ss_pred HHHhCCCCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCC
Confidence 99996 58999999999999999999999999999999997432111 11111111100 00 000
Q ss_pred ----hhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCc---hhh--hccC---CCCCCCEEEEEeCCCCCCChHHH
Q psy4974 234 ----PMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGR---NVY--QELL---PYVDVPVLVFHSADDVMVSTQQV 301 (345)
Q Consensus 234 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~l---~~i~~Pvl~i~G~~D~~v~~~~~ 301 (345)
..........+.... .... .. .......... ... ...+ ...++|+|+|+|++|.++|.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~--~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~ 224 (264)
T 2wfl_A 152 GMSMILGPQFMALKMFQNC--SVED----LE-LAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQ 224 (264)
T ss_dssp EEEEECCHHHHHHHTSTTS--CHHH----HH-HHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHH
T ss_pred cchhhhhHHHHHHHHhcCC--CHHH----HH-HHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCCHHHH
Confidence 000111111111100 0000 00 0000000000 000 0011 11368999999999999999999
Q ss_pred HHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 302 QSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
+.+++.+|++++++++++||++++|+|+++++.|.+|+.
T Consensus 225 ~~~~~~~p~~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 225 KWFVESVGADKVKEIKEADHMGMLSQPREVCKCLLDISD 263 (264)
T ss_dssp HHHHHHHCCSEEEEETTCCSCHHHHSHHHHHHHHHHHHC
T ss_pred HHHHHhCCCceEEEeCCCCCchhhcCHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999985
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-31 Score=227.41 Aligned_cols=226 Identities=12% Similarity=0.053 Sum_probs=156.0
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
.|+|||+||++++. ..|..+++.|++.||+|+++|+|| ||.|+.+.. ...+++++++++.+++
T Consensus 4 ~~~vvllHG~~~~~-~~w~~~~~~L~~~g~rVia~Dl~G-------------~G~S~~~~~---~~~~~~~~a~dl~~~l 66 (273)
T 1xkl_A 4 GKHFVLVHGACHGG-WSWYKLKPLLEAAGHKVTALDLAA-------------SGTDLRKIE---ELRTLYDYTLPLMELM 66 (273)
T ss_dssp CCEEEEECCTTCCG-GGGTTHHHHHHHTTCEEEECCCTT-------------STTCCCCGG---GCCSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCc-chHHHHHHHHHhCCCEEEEecCCC-------------CCCCccCcc---cccCHHHHHHHHHHHH
Confidence 36899999999885 899999999987789999999999 999975432 1227888999999999
Q ss_pred HHhC-CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc-hhHHHHHHhHh-cc--CCC--------------
Q psy4974 173 KLLG-VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI-DNVRVFEGMRR-LS--NWS-------------- 233 (345)
Q Consensus 173 ~~~~-~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~-~~--~~~-------------- 233 (345)
+.++ .++++|+||||||.+++.+|.++|++|+++|++++...... ........+.. .. .+.
T Consensus 67 ~~l~~~~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (273)
T 1xkl_A 67 ESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPL 146 (273)
T ss_dssp HTSCSSSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCC
T ss_pred HHhccCCCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCc
Confidence 9997 58999999999999999999999999999999997532111 11111111110 00 000
Q ss_pred ---hhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCch---hh--hccC---CCCCCCEEEEEeCCCCCCChHHHH
Q psy4974 234 ---PMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRN---VY--QELL---PYVDVPVLVFHSADDVMVSTQQVQ 302 (345)
Q Consensus 234 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~l---~~i~~Pvl~i~G~~D~~v~~~~~~ 302 (345)
..........+.... .... .. ........... .. ...+ ...++|+++|+|++|.++|++..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~--~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~ 219 (273)
T 1xkl_A 147 TSMFFGPKFLAHKLYQLC--SPED----LA-LASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQR 219 (273)
T ss_dssp EEEECCHHHHHHHTSTTS--CHHH----HH-HHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHH
T ss_pred cccccCHHHHHHHhhccC--CHHH----HH-HHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCCHHHHH
Confidence 000111111111100 0000 00 00000000000 00 0011 113689999999999999999999
Q ss_pred HHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 303 SLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
.+.+.+|++++++++++||++++|+|+++++.|.+|+++.
T Consensus 220 ~~~~~~p~~~~~~i~~aGH~~~~e~P~~~~~~i~~fl~~~ 259 (273)
T 1xkl_A 220 WQIDNIGVTEAIEIKGADHMAMLCEPQKLCASLLEIAHKY 259 (273)
T ss_dssp HHHHHHCCSEEEEETTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred HHHHhCCCCeEEEeCCCCCCchhcCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999764
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.9e-31 Score=228.26 Aligned_cols=246 Identities=10% Similarity=0.096 Sum_probs=170.0
Q ss_pred ceeeeEEEcCceEEEEEcCCCCceEEEEcCc--CCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC
Q psy4974 72 FTEGFFSIKGCDIRFIKYGSGAQVLFFTYGV--LGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 72 ~~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~--~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
++..++..++..++|...+ ++|+|||+||+ +++ ...|..+++.|++ ||+|+++|+|| ||.|+
T Consensus 21 ~~~~~v~~~~~~~~~~~~~-~~p~vv~lHG~G~~~~-~~~~~~~~~~L~~-~~~vi~~D~~G-------------~G~S~ 84 (292)
T 3l80_A 21 LNKEMVNTLLGPIYTCHRE-GNPCFVFLSGAGFFST-ADNFANIIDKLPD-SIGILTIDAPN-------------SGYSP 84 (292)
T ss_dssp CEEEEECCTTSCEEEEEEC-CSSEEEEECCSSSCCH-HHHTHHHHTTSCT-TSEEEEECCTT-------------STTSC
T ss_pred cCcceEEecCceEEEecCC-CCCEEEEEcCCCCCcH-HHHHHHHHHHHhh-cCeEEEEcCCC-------------CCCCC
Confidence 3467778888888887544 55799999954 555 4899999999985 69999999999 99998
Q ss_pred -CCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCC------c-hhHH
Q psy4974 150 -PKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLT------I-DNVR 221 (345)
Q Consensus 150 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~------~-~~~~ 221 (345)
.....+ +++++++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|+++|..... . ....
T Consensus 85 ~~~~~~~----~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 160 (292)
T 3l80_A 85 VSNQANV----GLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQ 160 (292)
T ss_dssp CCCCTTC----CHHHHHHHHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHH
T ss_pred CCCcccc----cHHHHHHHHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchh
Confidence 443344 788999999999999999999999999999999999999999999999999643210 0 0001
Q ss_pred HHHHhHhccCCCh---hhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCc------------hhhhccCCCCCCCEE
Q psy4974 222 VFEGMRRLSNWSP---MARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGR------------NVYQELLPYVDVPVL 286 (345)
Q Consensus 222 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~l~~i~~Pvl 286 (345)
............. ........++... ...... ............... .+..+.+.. ++|+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-~~P~l 236 (292)
T 3l80_A 161 LALRRQKLKTAADRLNYLKDLSRSHFSSQ--QFKQLW-RGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISE-KIPSI 236 (292)
T ss_dssp HHHHHHTCCSHHHHHHHHHHHHHHHSCHH--HHHHHH-HHHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCT-TSCEE
T ss_pred HHHHHHHHhccCchhhhHhhccccccCHH--HHHHhH-HHHHHHHHHHHhhhhccccchhhhhcchhhhhccCC-CCCEE
Confidence 1111111111000 1111111222221 111111 111111111111111 111245556 89999
Q ss_pred EEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 287 VFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 287 ~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
+|+|++|..++.+ + .+.+.+++.+ ++++++||+++.++|+++++.|.+||++..+
T Consensus 237 ii~g~~D~~~~~~-~-~~~~~~~~~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 291 (292)
T 3l80_A 237 VFSESFREKEYLE-S-EYLNKHTQTK-LILCGQHHYLHWSETNSILEKVEQLLSNHEK 291 (292)
T ss_dssp EEECGGGHHHHHT-S-TTCCCCTTCE-EEECCSSSCHHHHCHHHHHHHHHHHHHTCTT
T ss_pred EEEccCccccchH-H-HHhccCCCce-eeeCCCCCcchhhCHHHHHHHHHHHHHhccc
Confidence 9999999999888 6 7788888889 9999999999999999999999999987653
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-31 Score=225.96 Aligned_cols=226 Identities=12% Similarity=0.066 Sum_probs=155.8
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC-CCCCCccchHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG-RSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~-~~~~~~~~~~~~~~~~~~~ 171 (345)
.++|||+||++.+. ..|..+++.|++.||+|+++|+|| ||.|+.+. ..+ +++++++++.++
T Consensus 3 ~~~vvllHG~~~~~-~~w~~~~~~L~~~g~~via~Dl~G-------------~G~S~~~~~~~~----~~~~~a~dl~~~ 64 (257)
T 3c6x_A 3 FAHFVLIHTICHGA-WIWHKLKPLLEALGHKVTALDLAA-------------SGVDPRQIEEIG----SFDEYSEPLLTF 64 (257)
T ss_dssp CCEEEEECCTTCCG-GGGTTHHHHHHHTTCEEEEECCTT-------------STTCSCCGGGCC----SHHHHTHHHHHH
T ss_pred CCcEEEEcCCccCc-CCHHHHHHHHHhCCCEEEEeCCCC-------------CCCCCCCccccc----CHHHHHHHHHHH
Confidence 36899999999885 899999999988789999999999 99997532 223 788899999999
Q ss_pred HHHhC-CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc-hhHHHHHHhHh-ccCCCh--------------
Q psy4974 172 LKLLG-VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI-DNVRVFEGMRR-LSNWSP-------------- 234 (345)
Q Consensus 172 l~~~~-~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~-~~~~~~-------------- 234 (345)
+++++ .++++|+||||||.+++.+|.++|++|+++|++++...... ........... ...+..
T Consensus 65 l~~l~~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (257)
T 3c6x_A 65 LEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEIT 144 (257)
T ss_dssp HHTSCTTCCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEE
T ss_pred HHhccccCCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccc
Confidence 99995 58999999999999999999999999999999998532111 11111111100 000000
Q ss_pred ---hhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCc--hhh--hccC---CCCCCCEEEEEeCCCCCCChHHHHHH
Q psy4974 235 ---MARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGR--NVY--QELL---PYVDVPVLVFHSADDVMVSTQQVQSL 304 (345)
Q Consensus 235 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~l---~~i~~Pvl~i~G~~D~~v~~~~~~~~ 304 (345)
.........+.... .... ............. ... ...+ ...++|+|+|+|++|.++|.+..+.+
T Consensus 145 ~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~ 218 (257)
T 3c6x_A 145 GLKLGFTLLRENLYTLC--GPEE----YELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQ 218 (257)
T ss_dssp EEECCHHHHHHHTSTTS--CHHH----HHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHH
T ss_pred cccccHHHHHHHHhcCC--CHHH----HHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccCHHHHHHH
Confidence 00111111111110 0000 0000000000000 000 0011 11268999999999999999999999
Q ss_pred HhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 305 LNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 305 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
++.+|++++++++++||++++|+|+++++.|.+|+++.
T Consensus 219 ~~~~~~~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 219 IENYKPDKVYKVEGGDHKLQLTKTKEIAEILQEVADTY 256 (257)
T ss_dssp HHHSCCSEEEECCSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred HHHCCCCeEEEeCCCCCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999753
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-30 Score=241.92 Aligned_cols=256 Identities=16% Similarity=0.222 Sum_probs=184.5
Q ss_pred cceeeeEEE-cCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC
Q psy4974 71 VFTEGFFSI-KGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 71 ~~~~~~~~~-~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
.++..+++. +|.+++|...|++ |+||++||++++. ..|..+++.|+++||+|+++|+|| ||.|.
T Consensus 236 ~~~~~~~~~~dg~~l~~~~~g~~-p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~D~~G-------------~G~S~ 300 (555)
T 3i28_A 236 DMSHGYVTVKPRVRLHFVELGSG-PAVCLCHGFPESW-YSWRYQIPALAQAGYRVLAMDMKG-------------YGESS 300 (555)
T ss_dssp GSEEEEEEEETTEEEEEEEECSS-SEEEEECCTTCCG-GGGTTHHHHHHHTTCEEEEECCTT-------------STTSC
T ss_pred ccceeEEEeCCCcEEEEEEcCCC-CEEEEEeCCCCch-hHHHHHHHHHHhCCCEEEEecCCC-------------CCCCC
Confidence 345677777 8999999999966 6999999999995 999999999999999999999999 99997
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhc
Q psy4974 150 PKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRL 229 (345)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 229 (345)
.+... ...+++++++++.++++.++.++++++|||+||.+|+.+|.++|++|+++|+++++.................
T Consensus 301 ~~~~~--~~~~~~~~~~d~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 378 (555)
T 3i28_A 301 APPEI--EEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKAN 378 (555)
T ss_dssp CCSCG--GGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTC
T ss_pred CCCCc--ccccHHHHHHHHHHHHHHcCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcC
Confidence 66531 2236888899999999999999999999999999999999999999999999998655332221111111000
Q ss_pred c---------CC-------ChhhHHHHHHHcccCCc-----------------------hhhhhHHHHHHHHHHHH----
Q psy4974 230 S---------NW-------SPMARSEVLKAYDNDVN-----------------------YITGIFNQYVDMVNLIF---- 266 (345)
Q Consensus 230 ~---------~~-------~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~---- 266 (345)
. .. .......+...+..... ............+...+
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (555)
T 3i28_A 379 PVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSG 458 (555)
T ss_dssp GGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTT
T ss_pred CccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhccc
Confidence 0 00 00011111111111100 00000011111111110
Q ss_pred -----Hhh------CchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHH
Q psy4974 267 -----KSY------GRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEIS 335 (345)
Q Consensus 267 -----~~~------~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 335 (345)
..+ ...+....+.++++|+|+++|++|.++|.+..+.+.+.++++++++++++||+++.++|+++.+.|
T Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 538 (555)
T 3i28_A 459 FRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQIL 538 (555)
T ss_dssp THHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTTCEEEEETTCCSCHHHHSHHHHHHHH
T ss_pred chhHHHHHHhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCCCceEEEeCCCCCCcchhCHHHHHHHH
Confidence 000 011334556789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc
Q psy4974 336 RNFILEEN 343 (345)
Q Consensus 336 ~~fl~~~~ 343 (345)
.+||++..
T Consensus 539 ~~fl~~~~ 546 (555)
T 3i28_A 539 IKWLDSDA 546 (555)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhcc
Confidence 99998764
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-31 Score=222.34 Aligned_cols=226 Identities=16% Similarity=0.218 Sum_probs=166.6
Q ss_pred CceEEEEEcCC--CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCc
Q psy4974 81 GCDIRFIKYGS--GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPF 158 (345)
Q Consensus 81 g~~l~~~~~g~--~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~ 158 (345)
|.+++|...|+ ++|+||++||++++. ..|. .+..|. +||+|+++|+|| ||.|+. ...+
T Consensus 2 g~~l~y~~~g~~~~~~~vv~~hG~~~~~-~~~~-~~~~l~-~g~~v~~~d~~g-------------~g~s~~-~~~~--- 61 (245)
T 3e0x_A 2 NAMLHYVHVGNKKSPNTLLFVHGSGCNL-KIFG-ELEKYL-EDYNCILLDLKG-------------HGESKG-QCPS--- 61 (245)
T ss_dssp CCCCCEEEEECTTCSCEEEEECCTTCCG-GGGT-TGGGGC-TTSEEEEECCTT-------------STTCCS-CCCS---
T ss_pred CceeEEEecCCCCCCCEEEEEeCCcccH-HHHH-HHHHHH-hCCEEEEecCCC-------------CCCCCC-CCCc---
Confidence 56788888775 358999999999995 8899 888887 679999999999 999973 3333
Q ss_pred cchHHHHHHHHHHH------HHhCCccEEEEEeChhHHHHHHHHHh-CCcccceeeEeccCCCCCchhHHHHHHhHhccC
Q psy4974 159 QYIEEDVDIAYELL------KLLGVCKVSLFGWCDGGHLSFVFSMK-YPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSN 231 (345)
Q Consensus 159 ~~~~~~~~~~~~~l------~~~~~~~i~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 231 (345)
++++.++++.+++ +.++ +++++|||+||.+|+.+|.+ +|+ |+++|++++..............+.....
T Consensus 62 -~~~~~~~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 137 (245)
T 3e0x_A 62 -TVYGYIDNVANFITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQL 137 (245)
T ss_dssp -SHHHHHHHHHHHHHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCC
T ss_pred -CHHHHHHHHHHHHHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHH
Confidence 7888899999999 7777 99999999999999999999 999 99999999987653333333222221100
Q ss_pred CChhhH---------HHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHH
Q psy4974 232 WSPMAR---------SEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQ 302 (345)
Q Consensus 232 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~ 302 (345)
..... ......+... ... .......+......+....+.++++|+++++|++|.++|.+..+
T Consensus 138 -~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 208 (245)
T 3e0x_A 138 -DNNYLLECIGGIDNPLSEKYFETL----EKD----PDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSE 208 (245)
T ss_dssp -CHHHHHHHHTCSCSHHHHHHHTTS----CSS----HHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHH
T ss_pred -HhhcCcccccccchHHHHHHHHHH----hcC----cHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHH
Confidence 00000 0000000000 000 11111112222223345567788999999999999999999999
Q ss_pred HHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHH
Q psy4974 303 SLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
.+.+.++++++++++++||+++.++|+++.+.|.+||
T Consensus 209 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 209 IIKKEVENSELKIFETGKHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp HHHHHSSSEEEEEESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred HHHHHcCCceEEEeCCCCcceEEecHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999885
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=225.54 Aligned_cols=226 Identities=12% Similarity=0.080 Sum_probs=161.5
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|+|||+||++++. ..|..+++.|+++||+|+++|+|| ||.|+.+.. ...+++++++++.++++
T Consensus 5 ~~vv~lHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G-------------~G~S~~~~~---~~~~~~~~~~~l~~~l~ 67 (258)
T 3dqz_A 5 HHFVLVHNAYHGA-WIWYKLKPLLESAGHRVTAVELAA-------------SGIDPRPIQ---AVETVDEYSKPLIETLK 67 (258)
T ss_dssp CEEEEECCTTCCG-GGGTTHHHHHHHTTCEEEEECCTT-------------STTCSSCGG---GCCSHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCcc-ccHHHHHHHHHhCCCEEEEecCCC-------------CcCCCCCCC---ccccHHHhHHHHHHHHH
Confidence 6999999999995 999999999999899999999999 999976533 22378899999999999
Q ss_pred HhCC-ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHH-HHHHhHh-ccCCCh----------------
Q psy4974 174 LLGV-CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVR-VFEGMRR-LSNWSP---------------- 234 (345)
Q Consensus 174 ~~~~-~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~-~~~~~~---------------- 234 (345)
+++. ++++|+|||+||.+|+.+|.++|++|+++|++++.......... ....... ...+..
T Consensus 68 ~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (258)
T 3dqz_A 68 SLPENEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLL 147 (258)
T ss_dssp TSCTTCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEE
T ss_pred HhcccCceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhh
Confidence 9988 89999999999999999999999999999999986543322211 1111111 000000
Q ss_pred -hhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhC-------chhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHh
Q psy4974 235 -MARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYG-------RNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLN 306 (345)
Q Consensus 235 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~ 306 (345)
.........+... .... ............. ...........++|+++|+|++|.++|.+..+.+.+
T Consensus 148 ~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 221 (258)
T 3dqz_A 148 KMGPKFMKARLYQN--CPIE----DYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMID 221 (258)
T ss_dssp ECCHHHHHHHTSTT--SCHH----HHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHH
T ss_pred hhhHHHHHHHhhcc--CCHH----HHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHH
Confidence 0011111111111 0000 0000111000000 001111122236899999999999999999999999
Q ss_pred hcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 307 QLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 307 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
.++++++++++++||++++++|+++++.|.+|+++.
T Consensus 222 ~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 257 (258)
T 3dqz_A 222 NFNVSKVYEIDGGDHMVMLSKPQKLFDSLSAIATDY 257 (258)
T ss_dssp HSCCSCEEEETTCCSCHHHHSHHHHHHHHHHHHHHT
T ss_pred hCCcccEEEcCCCCCchhhcChHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999864
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=228.22 Aligned_cols=241 Identities=15% Similarity=0.183 Sum_probs=174.0
Q ss_pred cceeeeEEEcCceEEEEEcCC---CCceEEEEcCcCCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCC
Q psy4974 71 VFTEGFFSIKGCDIRFIKYGS---GAQVLFFTYGVLGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYG 146 (345)
Q Consensus 71 ~~~~~~~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G 146 (345)
.++..++..+|.+++|...++ +.|+||++||++++. ...|..+++.|.++||.|+++|+|| +|
T Consensus 21 ~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G-------------~G 87 (270)
T 3pfb_A 21 GMATITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNG-------------HG 87 (270)
T ss_dssp EEEEEEEEETTEEEEEEEEECSSSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTT-------------ST
T ss_pred cceEEEeccCCEEEEEEEEcCCCCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEcccc-------------cc
Confidence 345777888999999988753 347999999999872 2668999999999999999999999 99
Q ss_pred CCCCCCCCCCCccchHHHHHHHHHHHHHh----CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHH
Q psy4974 147 QSLPKGRSFVPFQYIEEDVDIAYELLKLL----GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRV 222 (345)
Q Consensus 147 ~s~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 222 (345)
.|..+...+ ++.+.++++.++++.+ +.++++|+|||+||.+|+.+|.++|++|+++|+++|........
T Consensus 88 ~s~~~~~~~----~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~--- 160 (270)
T 3pfb_A 88 DSDGKFENM----TVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDA--- 160 (270)
T ss_dssp TSSSCGGGC----CHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHH---
T ss_pred CCCCCCCcc----CHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhh---
Confidence 997655444 6777788888888887 66799999999999999999999999999999999876422111
Q ss_pred HHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHH
Q psy4974 223 FEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQ 302 (345)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~ 302 (345)
.............. ....+... .......+.. .. ...+....+..+++|+++++|++|.++|.+..+
T Consensus 161 ~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~----~~---~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 227 (270)
T 3pfb_A 161 LEGNTQGVTYNPDH---IPDRLPFK---DLTLGGFYLR----IA---QQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASK 227 (270)
T ss_dssp HHTEETTEECCTTS---CCSEEEET---TEEEEHHHHH----HH---HHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHH
T ss_pred hhhhhhccccCccc---cccccccc---ccccchhHhh----cc---cccCHHHHHhhCCccEEEEEcCCCCCCCHHHHH
Confidence 00000000000000 00000000 0000000111 11 111224456678999999999999999999999
Q ss_pred HHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 303 SLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
.+.+.++++++++++++||+++.++++++.+.|.+||++..+
T Consensus 228 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 269 (270)
T 3pfb_A 228 KYDQIYQNSTLHLIEGADHCFSDSYQKNAVNLTTDFLQNNNA 269 (270)
T ss_dssp HHHHHCSSEEEEEETTCCTTCCTHHHHHHHHHHHHHHC----
T ss_pred HHHHhCCCCeEEEcCCCCcccCccchHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999987653
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-29 Score=218.31 Aligned_cols=247 Identities=13% Similarity=0.111 Sum_probs=171.0
Q ss_pred eeEEEcCceEEEEEcCC---CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
.+...+|.+++|..+++ ++|+||++||++++. ..|..+++.|.++||+|+++|+|| ||.|..+
T Consensus 21 ~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G-------------~G~s~~~ 86 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHS-GRYEELARMLMGLDLLVFAHDHVG-------------HGQSEGE 86 (303)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCG-GGGHHHHHHHHHTTEEEEEECCTT-------------STTSCSS
T ss_pred eEecCCCeEEEEEEeccCCCCCeEEEEECCCCchh-hHHHHHHHHHHhCCCcEEEeCCCC-------------CCCCCCC
Confidence 55666999999988753 357899999999995 899999999999899999999999 9999755
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCC----ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhH
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGV----CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMR 227 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~----~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 227 (345)
.. ...++.+.++++.++++.+.. ++++++|||+||.+|+.+|.++|++|+++|++++...........+....
T Consensus 87 ~~---~~~~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 163 (303)
T 3pe6_A 87 RM---VVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLA 163 (303)
T ss_dssp TT---CCSSTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHH
T ss_pred CC---CCCCHHHHHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHH
Confidence 33 233667778888887777643 49999999999999999999999999999999998765543322221110
Q ss_pred -----hccC----------CChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCC
Q psy4974 228 -----RLSN----------WSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSAD 292 (345)
Q Consensus 228 -----~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~ 292 (345)
.... +.........................+........ .+....+.++++|+++++|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~P~l~i~g~~ 238 (303)
T 3pe6_A 164 AKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAV-----SRVERALPKLTVPFLLLQGSA 238 (303)
T ss_dssp HHHHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHH-----HHHHHHGGGCCSCEEEEEETT
T ss_pred HHHHHHhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHH-----HHHHHHhhcCCCCEEEEeeCC
Confidence 0000 00000111111111100000000001111111111 112345667899999999999
Q ss_pred CCCCChHHHHHHHhhcC--CcEEEEeCCCCCcccccChHHHHH---HHHHHHHhhc
Q psy4974 293 DVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCHIKHGQVFNE---ISRNFILEEN 343 (345)
Q Consensus 293 D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~---~i~~fl~~~~ 343 (345)
|.+++.+..+.+.+.++ +.++++++++||+++.++|+++.+ .+.+||++..
T Consensus 239 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~ 294 (303)
T 3pe6_A 239 DRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 294 (303)
T ss_dssp CSSBCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCChHHHHHHHHhcccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccC
Confidence 99999999999999998 789999999999999999875554 5777776653
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=228.28 Aligned_cols=229 Identities=8% Similarity=-0.026 Sum_probs=162.6
Q ss_pred CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
..+|+|||+||++++. ..|..+++.|.++||+|+++|+|| ||.|+.+... ..+++++++++.+
T Consensus 10 ~~~~~vvllHG~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G-------------~G~S~~~~~~---~~~~~~~~~~~~~ 72 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGA-WCWYKIVALMRSSGHNVTALDLGA-------------SGINPKQALQ---IPNFSDYLSPLME 72 (267)
T ss_dssp CCCCEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTT-------------STTCSCCGGG---CCSHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCc-chHHHHHHHHHhcCCeEEEecccc-------------CCCCCCcCCc---cCCHHHHHHHHHH
Confidence 3457999999999995 999999999999899999999999 9999766432 2378899999999
Q ss_pred HHHHhC-CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH-HHHHHhH-hccCCC--------------
Q psy4974 171 LLKLLG-VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV-RVFEGMR-RLSNWS-------------- 233 (345)
Q Consensus 171 ~l~~~~-~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~-~~~~~~-------------- 233 (345)
+++.++ .++++|+|||+||.+|+.+|.++|++|+++|++++......... ....... ....+.
T Consensus 73 ~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (267)
T 3sty_A 73 FMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPP 152 (267)
T ss_dssp HHHTSCTTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCC
T ss_pred HHHhcCCCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhccc
Confidence 999994 88999999999999999999999999999999998765432221 1111110 000000
Q ss_pred ---hhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCc--------hhhhccCCCCCCCEEEEEeCCCCCCChHHHH
Q psy4974 234 ---PMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGR--------NVYQELLPYVDVPVLVFHSADDVMVSTQQVQ 302 (345)
Q Consensus 234 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~ 302 (345)
..........+... .... .............. ..........++|+++|+|++|.++|.+..+
T Consensus 153 ~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 226 (267)
T 3sty_A 153 TTLIAGPKFLATNVYHL--SPIE----DLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLK 226 (267)
T ss_dssp CEEECCHHHHHHHTSTT--SCHH----HHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHH
T ss_pred chhhhhHHHHHHhhccc--CCHH----HHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHH
Confidence 00011111111111 0000 00111110000000 0001111122589999999999999999999
Q ss_pred HHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 303 SLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
.+.+.++++++++++++||++++++|+++++.|.+|+++.
T Consensus 227 ~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 227 LMIEKNPPDEVKEIEGSDHVTMMSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp HHHHHSCCSEEEECTTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred HHHHhCCCceEEEeCCCCccccccChHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999874
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-30 Score=219.48 Aligned_cols=238 Identities=15% Similarity=0.074 Sum_probs=172.4
Q ss_pred ceeeeEEE----cCceEEEEEcCCC---CceEEEEcCcCCCchhhH--HHHHHhhCCCCeEEEEeCCCCchhhhccCCcc
Q psy4974 72 FTEGFFSI----KGCDIRFIKYGSG---AQVLFFTYGVLGEIRNSF--KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTC 142 (345)
Q Consensus 72 ~~~~~~~~----~g~~l~~~~~g~~---~p~vv~lHG~~~~~~~~~--~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~ 142 (345)
.+..++++ +|..++|...+.. .|+||++||++++. ..| ..+...|.+.||+|+++|+||
T Consensus 9 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~~~l~~~g~~v~~~d~~G----------- 76 (270)
T 3llc_A 9 IETHAITVGQGSDARSIAALVRAPAQDERPTCIWLGGYRSDM-TGTKALEMDDLAASLGVGAIRFDYSG----------- 76 (270)
T ss_dssp EEEEEEEESSGGGCEEEEEEEECCSSTTSCEEEEECCTTCCT-TSHHHHHHHHHHHHHTCEEEEECCTT-----------
T ss_pred CCcceEEEeeccCcceEEEEeccCCCCCCCeEEEECCCcccc-ccchHHHHHHHHHhCCCcEEEecccc-----------
Confidence 34677888 9999999965443 68999999999884 444 447778877899999999999
Q ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHh---CC---cccceeeEeccCCCCC
Q psy4974 143 SGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMK---YP---HMVHKLVIWGTKSFLT 216 (345)
Q Consensus 143 ~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~---~p---~~v~~lvl~~~~~~~~ 216 (345)
+|.|......+ +++++++++.++++.++.++++++|||+||.+|+.+|.+ +| ++|+++|++++.....
T Consensus 77 --~G~s~~~~~~~----~~~~~~~d~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~ 150 (270)
T 3llc_A 77 --HGASGGAFRDG----TISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFT 150 (270)
T ss_dssp --STTCCSCGGGC----CHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHH
T ss_pred --CCCCCCccccc----cHHHHHHHHHHHHHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccch
Confidence 99997654433 788889999999999998999999999999999999999 99 8999999999976522
Q ss_pred chhHHHHHHhHhccCCChhhHHHHHHHc-ccC-Cchh---hhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeC
Q psy4974 217 IDNVRVFEGMRRLSNWSPMARSEVLKAY-DND-VNYI---TGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSA 291 (345)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~ 291 (345)
... ............+.... ... ..+. .......... .........+.++++|+++++|+
T Consensus 151 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~P~l~i~g~ 215 (270)
T 3llc_A 151 SDL--------IEPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMED-------GRANRVMAGMIDTGCPVHILQGM 215 (270)
T ss_dssp HHT--------TGGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHH-------HHHTCCTTSCCCCCSCEEEEEET
T ss_pred hhh--------hhhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhh-------hhhhhhhhhhhcCCCCEEEEecC
Confidence 110 00111111111111110 000 0000 0001111111 11112245677889999999999
Q ss_pred CCCCCChHHHHHHHhhcCC--cEEEEeCCCCCccc-ccChHHHHHHHHHHHHhh
Q psy4974 292 DDVMVSTQQVQSLLNQLKF--CQYYQFSSGGHSCH-IKHGQVFNEISRNFILEE 342 (345)
Q Consensus 292 ~D~~v~~~~~~~~~~~~~~--~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~ 342 (345)
+|.++|.+..+.+.+.+++ +++++++++||++. .+.++++.+.|.+||++.
T Consensus 216 ~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 269 (270)
T 3llc_A 216 ADPDVPYQHALKLVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEPR 269 (270)
T ss_dssp TCSSSCHHHHHHHHHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC--
T ss_pred CCCCCCHHHHHHHHHhcCCCCeeEEEeCCCcccccccccHHHHHHHHHHHhcCC
Confidence 9999999999999999987 89999999999655 477899999999999754
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-29 Score=220.70 Aligned_cols=251 Identities=18% Similarity=0.206 Sum_probs=163.7
Q ss_pred eeeeEEE-cCceEEEEEcCC-CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 73 TEGFFSI-KGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 73 ~~~~~~~-~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
+..++.+ +|..++|...|+ ..++|||+||++++. .. ..+...+...||+|+++|+|| ||.|+.
T Consensus 15 ~~~~~~~~~g~~l~~~~~g~~~g~~vvllHG~~~~~-~~-~~~~~~~~~~~~~vi~~D~~G-------------~G~S~~ 79 (317)
T 1wm1_A 15 DSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGG-IS-PHHRQLFDPERYKVLLFDQRG-------------CGRSRP 79 (317)
T ss_dssp EEEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCC-CC-GGGGGGSCTTTEEEEEECCTT-------------STTCBS
T ss_pred eeeEEEcCCCcEEEEEEcCCCCCCcEEEECCCCCcc-cc-hhhhhhccccCCeEEEECCCC-------------CCCCCC
Confidence 3566777 799999999875 346899999997763 22 223344555679999999999 999975
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH----------
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV---------- 220 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---------- 220 (345)
+.. . ...++.++++++.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 80 ~~~-~-~~~~~~~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 157 (317)
T 1wm1_A 80 HAS-L-DNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRF 157 (317)
T ss_dssp TTC-C-TTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGT
T ss_pred Ccc-c-ccccHHHHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhccchhh
Confidence 432 1 2236788899999999999999999999999999999999999999999999987543211100
Q ss_pred --HHHHHhHh-ccCCCh-hhHHHHHH-HcccCC-----------------------ch----hhhhHHHHHHHHHH-HHH
Q psy4974 221 --RVFEGMRR-LSNWSP-MARSEVLK-AYDNDV-----------------------NY----ITGIFNQYVDMVNL-IFK 267 (345)
Q Consensus 221 --~~~~~~~~-~~~~~~-~~~~~~~~-~~~~~~-----------------------~~----~~~~~~~~~~~~~~-~~~ 267 (345)
..+..... ...... .....+.. ...... .. ...........+.. .+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (317)
T 1wm1_A 158 FPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFT 237 (317)
T ss_dssp SHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhh
Confidence 00000000 000000 00000000 000000 00 00000000000100 000
Q ss_pred --hh-Cchh-hhccCCCCC-CCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCccccc-ChHHHHHHHHHHHH
Q psy4974 268 --SY-GRNV-YQELLPYVD-VPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIK-HGQVFNEISRNFIL 340 (345)
Q Consensus 268 --~~-~~~~-~~~~l~~i~-~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~ 340 (345)
.. .... ....+.++. +|+|+|+|++|.++|...++.+.+.+|++++++++++||+++.+ .++++.+.|.+|+.
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f~~ 316 (317)
T 1wm1_A 238 HLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSYDEPGILHQLMIATDRFAG 316 (317)
T ss_dssp TGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEETTCCSSTTSHHHHHHHHHHHHHHTC
T ss_pred cccccccchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcchHHHHHHHHHHHhc
Confidence 00 0111 234455674 99999999999999999999999999999999999999998764 58899999999975
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=234.89 Aligned_cols=249 Identities=16% Similarity=0.195 Sum_probs=178.6
Q ss_pred eeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS 154 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~ 154 (345)
.+.+.+|..++|...|++ |+|||+||++++. ..|..+++.|++.||+|+++|+|| ||.|+.+...
T Consensus 7 ~~~~~dG~~l~y~~~G~g-p~VV~lHG~~~~~-~~~~~l~~~La~~Gy~Vi~~D~rG-------------~G~S~~~~~~ 71 (456)
T 3vdx_A 7 GQENSTSIDLYYEDHGTG-VPVVLIHGFPLSG-HSWERQSAALLDAGYRVITYDRRG-------------FGQSSQPTTG 71 (456)
T ss_dssp EEETTEEEEEEEEEESSS-EEEEEECCTTCCG-GGGTTHHHHHHHHTEEEEEECCTT-------------STTSCCCSSC
T ss_pred cccccCCeEEEEEEeCCC-CEEEEECCCCCcH-HHHHHHHHHHHHCCcEEEEECCCC-------------CCCCCCCCCC
Confidence 445568999999999966 6999999999995 999999999988899999999999 9999877655
Q ss_pred CCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC-CcccceeeEeccCCCCCch---------hHHHHH
Q psy4974 155 FVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY-PHMVHKLVIWGTKSFLTID---------NVRVFE 224 (345)
Q Consensus 155 ~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~---------~~~~~~ 224 (345)
+ +++++++++.++++.++.++++|+|||+||.+++.+|..+ |++|+++|++++....... ......
T Consensus 72 ~----s~~~~a~dl~~~l~~l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 147 (456)
T 3vdx_A 72 Y----DYDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFD 147 (456)
T ss_dssp C----SHHHHHHHHHHHHHHHTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHH
T ss_pred C----CHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHH
Confidence 5 7888899999999999999999999999999999988887 8999999999986542111 011111
Q ss_pred HhHhc-cCCC-hhhHHHHHHHcccCCchhhhhHHHHHHHHHHHH---------Hhh--CchhhhccCCCCCCCEEEEEeC
Q psy4974 225 GMRRL-SNWS-PMARSEVLKAYDNDVNYITGIFNQYVDMVNLIF---------KSY--GRNVYQELLPYVDVPVLVFHSA 291 (345)
Q Consensus 225 ~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~--~~~~~~~~l~~i~~Pvl~i~G~ 291 (345)
.+... .... ..........+...................... ... ...+....+.++++|+|+|+|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~PvLiI~G~ 227 (456)
T 3vdx_A 148 GIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGT 227 (456)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTCCSCCEEEEET
T ss_pred HHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhhCCCCEEEEEeC
Confidence 11100 0000 001111112222111000011111111111000 000 0223345677899999999999
Q ss_pred CCCCCChH-HHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 292 DDVMVSTQ-QVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 292 ~D~~v~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+|.++|.+ ..+.+.+.++++++++++++||+++.++|+++.+.|.+||++.
T Consensus 228 ~D~~vp~~~~~~~l~~~~~~~~~~~i~gagH~~~~e~p~~v~~~I~~FL~~~ 279 (456)
T 3vdx_A 228 GDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAKA 279 (456)
T ss_dssp TCSSSCGGGTHHHHHHHCTTSEEEEETTCCSCTTTTTHHHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHCCCceEEEeCCCCCcchhhCHHHHHHHHHHHHHHh
Confidence 99999988 7888888889999999999999999999999999999999865
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=232.43 Aligned_cols=248 Identities=18% Similarity=0.302 Sum_probs=167.6
Q ss_pred CceEEEEEcCC----CCceEEEEcCcCCCchhh-------------HHHHH---HhhCCCCeEEEEeCCCCchhhhccCC
Q psy4974 81 GCDIRFIKYGS----GAQVLFFTYGVLGEIRNS-------------FKKQL---TAFDPKLFTSIFWDPPGNVVLYLLGK 140 (345)
Q Consensus 81 g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~-------------~~~~~---~~L~~~G~~vi~~D~~G~~~~~~~g~ 140 (345)
+.+|+|..+|+ +.|+|||+||++++. .. |..++ +.|...||+|+++|+||
T Consensus 26 ~~~i~y~~~g~~~~~~~p~vll~HG~~~~~-~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G--------- 95 (377)
T 3i1i_A 26 PVQMGYETYGTLNRERSNVILICHYFSATS-HAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLC--------- 95 (377)
T ss_dssp EEEEEEEEESCCCTTCCCEEEEECCTTCCS-CCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTT---------
T ss_pred eeeEEEEeecccCCCCCCEEEEeccccCcc-hhccccccccccccchhhhcCCCCccccccEEEEEecccc---------
Confidence 78889999874 237899999999985 55 88887 67777789999999999
Q ss_pred ccCCCCCCC-------CC----CC-------CCCCccchHHHHHHHHHHHHHhCCccEE-EEEeChhHHHHHHHHHhCCc
Q psy4974 141 TCSGYGQSL-------PK----GR-------SFVPFQYIEEDVDIAYELLKLLGVCKVS-LFGWCDGGHLSFVFSMKYPH 201 (345)
Q Consensus 141 ~~~~~G~s~-------~~----~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~i~-lvGhS~Gg~ia~~~a~~~p~ 201 (345)
||.|+ .+ .. .+ ...+++++++++.++++.++.++++ |+||||||.+|+.+|.++|+
T Consensus 96 ----~G~S~G~~~g~~g~~~~~p~~~~~~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~~p~ 170 (377)
T 3i1i_A 96 ----NVQVKNPHVITTGPKSINPKTGDEYAMDF-PVFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPH 170 (377)
T ss_dssp ----CSCTTSTTCCCCSTTSBCTTTSSBCGGGS-CCCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHHHHHHCTT
T ss_pred ----cccccCCCcccCCCCCCCCCCCCcccCCC-CCCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHHHHHHChH
Confidence 76532 11 10 01 1237889999999999999999986 99999999999999999999
Q ss_pred ccceeeE-eccCCCCCchhHHHHH----HhHhccCC--------Ch---------------hhHHHHHHHcccCCc--h-
Q psy4974 202 MVHKLVI-WGTKSFLTIDNVRVFE----GMRRLSNW--------SP---------------MARSEVLKAYDNDVN--Y- 250 (345)
Q Consensus 202 ~v~~lvl-~~~~~~~~~~~~~~~~----~~~~~~~~--------~~---------------~~~~~~~~~~~~~~~--~- 250 (345)
+|+++|+ +++............. .+.....| .+ .....+...+..... .
T Consensus 171 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (377)
T 3i1i_A 171 MVERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEP 250 (377)
T ss_dssp TBSEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGG
T ss_pred HHHHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccc
Confidence 9999999 7765542221111000 00000000 00 001111111211100 0
Q ss_pred ---h--hhhHHHHHHH----------------HHHHHHhhC----chhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHH
Q psy4974 251 ---I--TGIFNQYVDM----------------VNLIFKSYG----RNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLL 305 (345)
Q Consensus 251 ---~--~~~~~~~~~~----------------~~~~~~~~~----~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~ 305 (345)
+ ......+... ......... ..+....+.++++|+|+|+|++|.++|.+.++.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~ 330 (377)
T 3i1i_A 251 YEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMV 330 (377)
T ss_dssp GTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHH
T ss_pred cccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHH
Confidence 0 0001111111 111111111 11224456788999999999999999999999999
Q ss_pred hhc----CCcEEEEeCC-CCCcccccChHHHHHHHHHHHHhhc
Q psy4974 306 NQL----KFCQYYQFSS-GGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 306 ~~~----~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+.+ ++++++++++ +||++++++|+++++.|.+||++..
T Consensus 331 ~~~~~~g~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 331 DLLQKQGKYAEVYEIESINGHMAGVFDIHLFEKKVYEFLNRKV 373 (377)
T ss_dssp HHHHHTTCCEEECCBCCTTGGGHHHHCGGGTHHHHHHHHHSCC
T ss_pred HHHHhcCCCceEEEcCCCCCCcchhcCHHHHHHHHHHHHHhhh
Confidence 999 9999999998 9999999999999999999998764
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=228.27 Aligned_cols=253 Identities=18% Similarity=0.264 Sum_probs=174.0
Q ss_pred eEEEcCceEEEEEcCCC----CceEEEEcCcCCCchh-------------hHHHHHH---hhCCCCeEEEEeCCCCchhh
Q psy4974 76 FFSIKGCDIRFIKYGSG----AQVLFFTYGVLGEIRN-------------SFKKQLT---AFDPKLFTSIFWDPPGNVVL 135 (345)
Q Consensus 76 ~~~~~g~~l~~~~~g~~----~p~vv~lHG~~~~~~~-------------~~~~~~~---~L~~~G~~vi~~D~~G~~~~ 135 (345)
..+++|..++|...|+. .|+|||+||++++. . .|..++. .|...||+|+++|+||
T Consensus 25 g~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G---- 99 (366)
T 2pl5_A 25 GSVLSPVVIAYETYGTLSSSKNNAILICHALSGDA-HAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIG---- 99 (366)
T ss_dssp SCEESSEEEEEEEEECCCTTSCCEEEEECCSSCCS-CCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTT----
T ss_pred CccccCceeeEEeccCcCCCCCceEEEecccCCcc-cccccccccccccchHHhhcCCcccccccccEEEEecCCC----
Confidence 34678899999998862 57999999999995 5 7888874 4556689999999999
Q ss_pred hccCCccCCC--CCCCCCCCCCC---------CccchHHHHHHHHHHHHHhCCccE-EEEEeChhHHHHHHHHHhCCccc
Q psy4974 136 YLLGKTCSGY--GQSLPKGRSFV---------PFQYIEEDVDIAYELLKLLGVCKV-SLFGWCDGGHLSFVFSMKYPHMV 203 (345)
Q Consensus 136 ~~~g~~~~~~--G~s~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~i-~lvGhS~Gg~ia~~~a~~~p~~v 203 (345)
| |.|........ ...+++++++++.++++.++.+++ +|+||||||.+|+.+|.++|++|
T Consensus 100 ---------~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 170 (366)
T 2pl5_A 100 ---------GCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSL 170 (366)
T ss_dssp ---------CSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSE
T ss_pred ---------cccCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcHhh
Confidence 6 55543211000 023788999999999999999999 89999999999999999999999
Q ss_pred ceeeEeccCCCCCchhHHHHHHhH----hccCC---------Ch--------------hhHHHHHHHcccCC--------
Q psy4974 204 HKLVIWGTKSFLTIDNVRVFEGMR----RLSNW---------SP--------------MARSEVLKAYDNDV-------- 248 (345)
Q Consensus 204 ~~lvl~~~~~~~~~~~~~~~~~~~----~~~~~---------~~--------------~~~~~~~~~~~~~~-------- 248 (345)
+++|++++................ ....+ .. .....+...+....
T Consensus 171 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (366)
T 2pl5_A 171 SNCIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILST 250 (366)
T ss_dssp EEEEEESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTT
T ss_pred hheeEeccCccCCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccch
Confidence 999999998765432211111110 00000 00 00011111111110
Q ss_pred -----chh--------hhhHHHHHHHHHHHHHhhCc---hhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC---
Q psy4974 249 -----NYI--------TGIFNQYVDMVNLIFKSYGR---NVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK--- 309 (345)
Q Consensus 249 -----~~~--------~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~--- 309 (345)
.+. ..............+..... .+....+.++++|+|+|+|++|.++|.+.++.+.+.++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 330 (366)
T 2pl5_A 251 DFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAAD 330 (366)
T ss_dssp TTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcc
Confidence 000 00001111111111211111 12344677899999999999999999999999999998
Q ss_pred -CcEEEEe-CCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 310 -FCQYYQF-SSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 310 -~~~~~~~-~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+++++++ +++||+++.++|+++.+.|.+||++.
T Consensus 331 ~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 331 KRVFYVELQSGEGHDSFLLKNPKQIEILKGFLENP 365 (366)
T ss_dssp CCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHCC
T ss_pred cCeEEEEeCCCCCcchhhcChhHHHHHHHHHHccC
Confidence 8999999 89999999999999999999999865
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=228.84 Aligned_cols=252 Identities=13% Similarity=0.210 Sum_probs=174.5
Q ss_pred eEEEcCceEEEEEcCCC----CceEEEEcCcCCCchhh---------HHHHHH---hhCCCCeEEEEeCCCCchhhhccC
Q psy4974 76 FFSIKGCDIRFIKYGSG----AQVLFFTYGVLGEIRNS---------FKKQLT---AFDPKLFTSIFWDPPGNVVLYLLG 139 (345)
Q Consensus 76 ~~~~~g~~l~~~~~g~~----~p~vv~lHG~~~~~~~~---------~~~~~~---~L~~~G~~vi~~D~~G~~~~~~~g 139 (345)
...++|..++|...|+. .|+|||+||++++. .. |..+++ .|+..||+|+++|+||
T Consensus 38 g~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G-------- 108 (377)
T 2b61_A 38 GGKLSYINVAYQTYGTLNDEKNNAVLICHALTGDA-EPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLG-------- 108 (377)
T ss_dssp SCEECSEEEEEEEESCCCTTCCCEEEEECCTTCCS-CSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTT--------
T ss_pred CceecceeEEEEecccccccCCCeEEEeCCCCCcc-ccccccccchhhhhccCcccccccCCceEEEecCCC--------
Confidence 35678999999998862 47999999999995 76 888875 4866789999999999
Q ss_pred CccCCC-CCCCCCCC-------CCC---CccchHHHHHHHHHHHHHhCCccEE-EEEeChhHHHHHHHHHhCCcccceee
Q psy4974 140 KTCSGY-GQSLPKGR-------SFV---PFQYIEEDVDIAYELLKLLGVCKVS-LFGWCDGGHLSFVFSMKYPHMVHKLV 207 (345)
Q Consensus 140 ~~~~~~-G~s~~~~~-------~~~---~~~~~~~~~~~~~~~l~~~~~~~i~-lvGhS~Gg~ia~~~a~~~p~~v~~lv 207 (345)
+ |.|+.+.. .|. ...+++++++++.++++.++.++++ |+||||||.+|+.+|.++|++|+++|
T Consensus 109 -----~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 183 (377)
T 2b61_A 109 -----GCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIV 183 (377)
T ss_dssp -----CSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEE
T ss_pred -----CCCCCCCCcccCccccccccccCCcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCchhhheeE
Confidence 7 77765421 000 1237889999999999999999998 99999999999999999999999999
Q ss_pred EeccCCCCCchhHHHHH----HhHhccCCCh---------h-------h--------HHHHHHHcccCCch------hhh
Q psy4974 208 IWGTKSFLTIDNVRVFE----GMRRLSNWSP---------M-------A--------RSEVLKAYDNDVNY------ITG 253 (345)
Q Consensus 208 l~~~~~~~~~~~~~~~~----~~~~~~~~~~---------~-------~--------~~~~~~~~~~~~~~------~~~ 253 (345)
++++............. .+.....|.. . . ...+...+...... ...
T Consensus 184 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (377)
T 2b61_A 184 NLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYF 263 (377)
T ss_dssp EESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCB
T ss_pred EeccCccccccchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchH
Confidence 99997654422211111 1111000000 0 0 01111111111000 000
Q ss_pred hHHHHHH-------------HHHHHHHhh---C----chhhhccCCCCCCCEEEEEeCCCCCCCh----HHHHHHHhhcC
Q psy4974 254 IFNQYVD-------------MVNLIFKSY---G----RNVYQELLPYVDVPVLVFHSADDVMVST----QQVQSLLNQLK 309 (345)
Q Consensus 254 ~~~~~~~-------------~~~~~~~~~---~----~~~~~~~l~~i~~Pvl~i~G~~D~~v~~----~~~~~~~~~~~ 309 (345)
..+.+.. .+....... . ..+....+.++++|+|+|+|++|.++|. +..+.+.+.++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~ 343 (377)
T 2b61_A 264 QVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGV 343 (377)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCC
Confidence 1111111 011111111 0 0122456778999999999999999999 88999999999
Q ss_pred CcEEEEeC-CCCCcccccChHHHHHHHHHHHHh
Q psy4974 310 FCQYYQFS-SGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 310 ~~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
++++++++ ++||+++.++|+++++.|.+||++
T Consensus 344 ~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 344 DLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp EEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred CceEEEeCCCCCchhhhcCHHHHHHHHHHHHhc
Confidence 99999999 999999999999999999999975
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-29 Score=205.72 Aligned_cols=195 Identities=15% Similarity=0.259 Sum_probs=168.8
Q ss_pred ceeeeEEEcCceEE---EEEcCCCCceEEEEcCcCCCchhhHHH--HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCC
Q psy4974 72 FTEGFFSIKGCDIR---FIKYGSGAQVLFFTYGVLGEIRNSFKK--QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYG 146 (345)
Q Consensus 72 ~~~~~~~~~g~~l~---~~~~g~~~p~vv~lHG~~~~~~~~~~~--~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G 146 (345)
+++.+++.+|.+++ |...+ ..|+||++||++++. ..|.. +++.|+++||.|+++|+|| +|
T Consensus 4 ~~~~~~~~~g~~l~~~~~~~~~-~~~~vv~~hG~~~~~-~~~~~~~~~~~l~~~G~~v~~~d~~g-------------~g 68 (207)
T 3bdi_A 4 LQEEFIDVNGTRVFQRKMVTDS-NRRSIALFHGYSFTS-MDWDKADLFNNYSKIGYNVYAPDYPG-------------FG 68 (207)
T ss_dssp CEEEEEEETTEEEEEEEECCTT-CCEEEEEECCTTCCG-GGGGGGTHHHHHHTTTEEEEEECCTT-------------ST
T ss_pred ceeEEEeeCCcEEEEEEEeccC-CCCeEEEECCCCCCc-cccchHHHHHHHHhCCCeEEEEcCCc-------------cc
Confidence 44778888999999 76666 447999999999995 89999 9999999999999999999 99
Q ss_pred CC---CCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHH
Q psy4974 147 QS---LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVF 223 (345)
Q Consensus 147 ~s---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 223 (345)
.| ..+.. ...++++.++++.++++.++.++++++|||+||.+++.++.++|++++++++++|......
T Consensus 69 ~s~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------ 139 (207)
T 3bdi_A 69 RSASSEKYGI---DRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVESL------ 139 (207)
T ss_dssp TSCCCTTTCC---TTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGGG------
T ss_pred ccCcccCCCC---CcchHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccch------
Confidence 98 54432 2226788899999999999999999999999999999999999999999999998743110
Q ss_pred HHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHH
Q psy4974 224 EGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQS 303 (345)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~ 303 (345)
...+.++++|+++++|++|.+++.+..+.
T Consensus 140 ---------------------------------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~ 168 (207)
T 3bdi_A 140 ---------------------------------------------------KGDMKKIRQKTLLVWGSKDHVVPIALSKE 168 (207)
T ss_dssp ---------------------------------------------------HHHHTTCCSCEEEEEETTCTTTTHHHHHH
T ss_pred ---------------------------------------------------hHHHhhccCCEEEEEECCCCccchHHHHH
Confidence 11234567999999999999999999999
Q ss_pred HHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 304 LLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 304 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+.+.+++.++.+++++||..+.++++++.+.|.+||++
T Consensus 169 ~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 169 YASIISGSRLEIVEGSGHPVYIEKPEEFVRITVDFLRN 206 (207)
T ss_dssp HHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred HHHhcCCceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999975
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-29 Score=218.44 Aligned_cols=249 Identities=17% Similarity=0.191 Sum_probs=157.8
Q ss_pred eeeeEEE-cCceEEEEEcCC-CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 73 TEGFFSI-KGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 73 ~~~~~~~-~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
+..++.+ +|..++|...|+ ..++|||+||++++. .. ..+...+...||+|+++|+|| ||.|+.
T Consensus 12 ~~~~~~~~~g~~l~y~~~G~~~g~pvvllHG~~~~~-~~-~~~~~~~~~~~~~vi~~D~~G-------------~G~S~~ 76 (313)
T 1azw_A 12 QQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGG-CN-DKMRRFHDPAKYRIVLFDQRG-------------SGRSTP 76 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTC-CC-GGGGGGSCTTTEEEEEECCTT-------------STTSBS
T ss_pred ccceEEcCCCCEEEEEecCCCCCCeEEEECCCCCcc-cc-HHHHHhcCcCcceEEEECCCC-------------CcCCCC
Confidence 3666777 789999999885 346899999987763 22 223345555679999999999 999975
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH----------
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV---------- 220 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---------- 220 (345)
+... ...+++++++++.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 77 ~~~~--~~~~~~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 154 (313)
T 1azw_A 77 HADL--VDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRL 154 (313)
T ss_dssp TTCC--TTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHH
T ss_pred Cccc--ccccHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccccCchhhhHHHHhhhhhhh
Confidence 4321 1236788899999999999999999999999999999999999999999999987543211100
Q ss_pred --HHHHHhHh-ccC-CChhhHHHHHH-HcccCCc------------------hh--hh--------hHHHHHHHHHH-HH
Q psy4974 221 --RVFEGMRR-LSN-WSPMARSEVLK-AYDNDVN------------------YI--TG--------IFNQYVDMVNL-IF 266 (345)
Q Consensus 221 --~~~~~~~~-~~~-~~~~~~~~~~~-~~~~~~~------------------~~--~~--------~~~~~~~~~~~-~~ 266 (345)
........ ... ........+.. ....... .. .. ........+.. .+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (313)
T 1azw_A 155 FPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYF 234 (313)
T ss_dssp CHHHHHHHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred chHHHHHHhhccCchhhhhhhhhhhhhccccCcchhhhhhhHHhhhhccccccccccccchhccccchhhHHHHhhhhhh
Confidence 00000000 000 00000000000 0000000 00 00 00000000000 00
Q ss_pred H--hhC--chhhhccCCCCC-CCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCccccc-ChHHHHHHHHHH
Q psy4974 267 K--SYG--RNVYQELLPYVD-VPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIK-HGQVFNEISRNF 338 (345)
Q Consensus 267 ~--~~~--~~~~~~~l~~i~-~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~f 338 (345)
. ... .......+.++. +|+|+|+|++|.++|.+.++.+++.+|++++++++++||+++.+ .++++.+.|.+|
T Consensus 235 ~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f 312 (313)
T 1azw_A 235 VNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPKAQLQISPASGHSAFEPENVDALVRATDGF 312 (313)
T ss_dssp HTGGGCSSTTHHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred cccccccccchhhhhcccccCCCEEEEecCCCCcCCHHHHHHHHhhCCCcEEEEeCCCCCCcCCCccHHHHHHHHhhc
Confidence 0 000 112234455674 99999999999999999999999999999999999999987542 245555555555
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-29 Score=232.86 Aligned_cols=252 Identities=16% Similarity=0.238 Sum_probs=173.9
Q ss_pred EEEcCceEEEEEcCCC----CceEEEEcCcCCCchhh---HHHHHH---hhCCCCeEEEEeCCCCchhhhccCCccCCC-
Q psy4974 77 FSIKGCDIRFIKYGSG----AQVLFFTYGVLGEIRNS---FKKQLT---AFDPKLFTSIFWDPPGNVVLYLLGKTCSGY- 145 (345)
Q Consensus 77 ~~~~g~~l~~~~~g~~----~p~vv~lHG~~~~~~~~---~~~~~~---~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~- 145 (345)
..++|..++|..+|+. .|+|||+||++++. .. |..++. .|...||+|+++|+|| |
T Consensus 89 ~~~~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~-~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G-------------~~ 154 (444)
T 2vat_A 89 VILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSA-HVTSWWPTLFGQGRAFDTSRYFIICLNYLG-------------SP 154 (444)
T ss_dssp CEEEEEEEEEEEESCCCTTSCCEEEEECCTTCCS-CGGGTCGGGBSTTSSBCTTTCEEEEECCTT-------------CS
T ss_pred CEecceeEEEEEecCCCCCCCCeEEEECCCCccc-chhhHHHHhcCccchhhccCCEEEEecCCC-------------CC
Confidence 3467889999999862 47999999999995 77 888775 5766789999999999 6
Q ss_pred -CCCCCCC------CC--CC---CccchHHHHHHHHHHHHHhCCcc-EEEEEeChhHHHHHHHHHhCCcccceeeEeccC
Q psy4974 146 -GQSLPKG------RS--FV---PFQYIEEDVDIAYELLKLLGVCK-VSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTK 212 (345)
Q Consensus 146 -G~s~~~~------~~--~~---~~~~~~~~~~~~~~~l~~~~~~~-i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 212 (345)
|.|.... .. |. ...+++++++++.++++.++.++ ++|+||||||.+|+.+|.++|++|+++|++++.
T Consensus 155 ~G~S~~~~~~~~~~~~~~~~~~f~~~t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~ 234 (444)
T 2vat_A 155 FGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATS 234 (444)
T ss_dssp SSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCC
T ss_pred CCCCCCCCCCcccccccccccccccccHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEecc
Confidence 6664311 00 10 12378899999999999999999 999999999999999999999999999999997
Q ss_pred CCCCchhHHHHHH----hHhccCCC---------hh---------------hHHHHHHHcccCCc---------------
Q psy4974 213 SFLTIDNVRVFEG----MRRLSNWS---------PM---------------ARSEVLKAYDNDVN--------------- 249 (345)
Q Consensus 213 ~~~~~~~~~~~~~----~~~~~~~~---------~~---------------~~~~~~~~~~~~~~--------------- 249 (345)
............. +.....+. +. ....+...+.....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (444)
T 2vat_A 235 CRQSGWCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKE 314 (444)
T ss_dssp SBCCHHHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC-------------
T ss_pred ccCCccchhHHHHHHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccc
Confidence 7654322111110 00000000 00 00111122211100
Q ss_pred ----------h--hh-hhHHHHHH-------------HHHHHHHhhCch--------hhhccCCCCCCCEEEEEeCCCCC
Q psy4974 250 ----------Y--IT-GIFNQYVD-------------MVNLIFKSYGRN--------VYQELLPYVDVPVLVFHSADDVM 295 (345)
Q Consensus 250 ----------~--~~-~~~~~~~~-------------~~~~~~~~~~~~--------~~~~~l~~i~~Pvl~i~G~~D~~ 295 (345)
+ .. ...+.+.. .+.......... +....+.++++|+|+|+|++|.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~ 394 (444)
T 2vat_A 315 INGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGL 394 (444)
T ss_dssp --------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSS
T ss_pred cccccccccccccCchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCC
Confidence 0 00 00011110 111111111111 14556788999999999999999
Q ss_pred CChHHHHHHHhhcCCcEEEEeC-CCCCcccccChHHHHHHHHHHHHhh
Q psy4974 296 VSTQQVQSLLNQLKFCQYYQFS-SGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 296 v~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+|.+..+.+++.++++++++++ ++||++++++|+++++.|.+||++.
T Consensus 395 ~p~~~~~~l~~~~p~~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~~ 442 (444)
T 2vat_A 395 YSFDEHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQS 442 (444)
T ss_dssp SCHHHHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHCCCcEEEEeCCCCCcchHHhCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 8999999999999999999999764
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-28 Score=217.97 Aligned_cols=246 Identities=13% Similarity=0.107 Sum_probs=169.1
Q ss_pred eeEEEcCceEEEEEcCC---CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
.+...+|..++|..+++ ++|+|||+||++++. ..|..+++.|.++||.|+++|+|| +|.|..+
T Consensus 39 ~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G-------------~G~S~~~ 104 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHS-GRYEELARMLMGLDLLVFAHDHVG-------------HGQSEGE 104 (342)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCG-GGGHHHHHHHHTTTEEEEEECCTT-------------STTSCSS
T ss_pred eEEccCCeEEEEEEeCCCCCCCcEEEEECCCCccc-chHHHHHHHHHhCCCeEEEEcCCC-------------CcCCCCc
Confidence 45566999999988743 347899999999995 899999999999899999999999 9999765
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCC----ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh-
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGV----CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM- 226 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~----~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~- 226 (345)
.. ...++.+.++++.++++.+.. ++++|+|||+||.+++.+|.++|++|+++|++++...........+...
T Consensus 105 ~~---~~~~~~~~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 181 (342)
T 3hju_A 105 RM---VVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLA 181 (342)
T ss_dssp TT---CCSCTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHH
T ss_pred CC---CcCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHH
Confidence 42 223667778888877777643 3999999999999999999999999999999999766443221111100
Q ss_pred ----HhccC----------CChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCC
Q psy4974 227 ----RRLSN----------WSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSAD 292 (345)
Q Consensus 227 ----~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~ 292 (345)
..... +.........................+........ .+....+.++++|+|+|+|++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~Pvlii~G~~ 256 (342)
T 3hju_A 182 AKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAV-----SRVERALPKLTVPFLLLQGSA 256 (342)
T ss_dssp HHHHHHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHH-----HHHHHHGGGCCSCEEEEEETT
T ss_pred HHHHHHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHH-----HHHHHHHHhCCcCEEEEEeCC
Confidence 00000 00000111111111000000000001111111111 112345667899999999999
Q ss_pred CCCCChHHHHHHHhhcC--CcEEEEeCCCCCcccccChHHHHH---HHHHHHHhh
Q psy4974 293 DVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCHIKHGQVFNE---ISRNFILEE 342 (345)
Q Consensus 293 D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~---~i~~fl~~~ 342 (345)
|.+++.+..+.+.+.++ ++++++++++||+++.++|+++.+ .+.+||++.
T Consensus 257 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~ 311 (342)
T 3hju_A 257 DRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQR 311 (342)
T ss_dssp CSSSCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CcccChHHHHHHHHHcCCCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcc
Confidence 99999999999999998 789999999999999999875554 477777654
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=222.78 Aligned_cols=243 Identities=14% Similarity=0.150 Sum_probs=172.0
Q ss_pred ceeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 72 FTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 72 ~~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
|++.++.++|..++|.. + ++|+||++||++++. ..|..+++.|.++||.|+++|+|| +|.|..+
T Consensus 21 m~~~~~~~~g~~~~~~~-g-~~~~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G-------------~G~s~~~ 84 (270)
T 3rm3_A 21 MSEQYPVLSGAEPFYAE-N-GPVGVLLVHGFTGTP-HSMRPLAEAYAKAGYTVCLPRLKG-------------HGTHYED 84 (270)
T ss_dssp CCCSSCCCTTCCCEEEC-C-SSEEEEEECCTTCCG-GGTHHHHHHHHHTTCEEEECCCTT-------------CSSCHHH
T ss_pred cCCCccCCCCCcccccC-C-CCeEEEEECCCCCCh-hHHHHHHHHHHHCCCEEEEeCCCC-------------CCCCccc
Confidence 44566778999998875 3 347999999999995 899999999999999999999999 9999654
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhC--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhc
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLG--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRL 229 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 229 (345)
...+ +++++++++.++++.+. .++++++|||+||.+|+.+|.++|+ |+++|+++++........ ........
T Consensus 85 ~~~~----~~~~~~~d~~~~i~~l~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~-~~~~~~~~ 158 (270)
T 3rm3_A 85 MERT----TFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAA-GMTGGGEL 158 (270)
T ss_dssp HHTC----CHHHHHHHHHHHHHHHHTTCSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHH-HSCC---C
T ss_pred cccC----CHHHHHHHHHHHHHHHHhhCCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceeccccccc-chhcchhH
Confidence 3333 67788999999999887 7899999999999999999999999 999999999765422211 10000000
Q ss_pred cCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC
Q psy4974 230 SNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK 309 (345)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~ 309 (345)
..+............... ..+..........+..... +....+.++++|+|+++|++|.++|.+..+.+.+.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~ 232 (270)
T 3rm3_A 159 PRYLDSIGSDLKNPDVKE-LAYEKTPTASLLQLARLMA-----QTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGIS 232 (270)
T ss_dssp CSEEECCCCCCSCTTCCC-CCCSEEEHHHHHHHHHHHH-----HHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSC
T ss_pred HHHHHHhCccccccchHh-hcccccChhHHHHHHHHHH-----HHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcC
Confidence 000000000000000000 0000111111111111111 1234466789999999999999999999999999998
Q ss_pred Cc--EEEEeCCCCCcccccCh-HHHHHHHHHHHHhh
Q psy4974 310 FC--QYYQFSSGGHSCHIKHG-QVFNEISRNFILEE 342 (345)
Q Consensus 310 ~~--~~~~~~~~gH~~~~~~~-~~~~~~i~~fl~~~ 342 (345)
+. ++++++++||+++.+.+ +++.+.|.+||++.
T Consensus 233 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 233 STEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKH 268 (270)
T ss_dssp CSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHHH
T ss_pred CCcceEEEeCCCCcccccCccHHHHHHHHHHHHHhc
Confidence 65 99999999999999876 89999999999875
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-29 Score=229.66 Aligned_cols=254 Identities=14% Similarity=0.102 Sum_probs=172.8
Q ss_pred eeEEEcCceEEEEEcCC---------C-CceEEEEcCcCCCchhhHHHHHHhhC----CCCe---EEEEeCCCCchhhhc
Q psy4974 75 GFFSIKGCDIRFIKYGS---------G-AQVLFFTYGVLGEIRNSFKKQLTAFD----PKLF---TSIFWDPPGNVVLYL 137 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~---------~-~p~vv~lHG~~~~~~~~~~~~~~~L~----~~G~---~vi~~D~~G~~~~~~ 137 (345)
.++..+|..++|..+++ + +|+|||+||++++. ..|..+++.|+ +.|| +|+++|+||
T Consensus 24 ~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~-~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G------ 96 (398)
T 2y6u_A 24 TLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSK-VVWEYYLPRLVAADAEGNYAIDKVLLIDQVN------ 96 (398)
T ss_dssp BSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCG-GGGGGGGGGSCCCBTTTTEEEEEEEEECCTT------
T ss_pred cccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcH-HHHHHHHHHHHHhhhhcCcceeEEEEEcCCC------
Confidence 34456899999988763 2 26999999999995 99999999998 3489 999999999
Q ss_pred cCCccCCCCCCCCCCCC-CCCccchHHHHHHHHHHHHHhC----Ccc--EEEEEeChhHHHHHHHHHhCCcccceeeEec
Q psy4974 138 LGKTCSGYGQSLPKGRS-FVPFQYIEEDVDIAYELLKLLG----VCK--VSLFGWCDGGHLSFVFSMKYPHMVHKLVIWG 210 (345)
Q Consensus 138 ~g~~~~~~G~s~~~~~~-~~~~~~~~~~~~~~~~~l~~~~----~~~--i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 210 (345)
||.|+.+... +....++.++++++.++++.+. .++ ++|+||||||.+|+.+|.++|++|+++|+++
T Consensus 97 -------~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 169 (398)
T 2y6u_A 97 -------HGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIE 169 (398)
T ss_dssp -------SHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEES
T ss_pred -------CCCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEec
Confidence 9998653211 0022378888999999998754 444 9999999999999999999999999999999
Q ss_pred cCCCCCc---------------hhHHHHHHhHhccCCChhhHHHHHHHcccCC---chhhhhHHHHHHHH----------
Q psy4974 211 TKSFLTI---------------DNVRVFEGMRRLSNWSPMARSEVLKAYDNDV---NYITGIFNQYVDMV---------- 262 (345)
Q Consensus 211 ~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---------- 262 (345)
+...... ........+.............+...+.... .......+.+....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (398)
T 2y6u_A 170 PVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDED 249 (398)
T ss_dssp CCCSCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC-------
T ss_pred cccccccccccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccC
Confidence 8765311 0011111111110000000011111111000 00111111111100
Q ss_pred ----------HHHHHhh-----CchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 263 ----------NLIFKSY-----GRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 263 ----------~~~~~~~-----~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
......+ ...+....+..+++|+|+|+|++|.++|++.++.+.+.++++++++++++||+++.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~e~ 329 (398)
T 2y6u_A 250 GGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQNYHLDVIPGGSHLVNVEA 329 (398)
T ss_dssp -CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCSSEEEEEETTCCTTHHHHS
T ss_pred CCceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCCCceEEEeCCCCccchhcC
Confidence 0000000 0112335567889999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhh
Q psy4974 328 GQVFNEISRNFILEE 342 (345)
Q Consensus 328 ~~~~~~~i~~fl~~~ 342 (345)
|+++.+.|.+||.+.
T Consensus 330 p~~~~~~i~~fl~~~ 344 (398)
T 2y6u_A 330 PDLVIERINHHIHEF 344 (398)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999764
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=216.59 Aligned_cols=229 Identities=12% Similarity=0.115 Sum_probs=146.5
Q ss_pred eeeEEE-cCceEEEEEcCC------CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCC-
Q psy4974 74 EGFFSI-KGCDIRFIKYGS------GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGY- 145 (345)
Q Consensus 74 ~~~~~~-~g~~l~~~~~g~------~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~- 145 (345)
..++.. +|..++|...++ ..|+|||+||++++. ..|..+++.|+++||+|+++|+|| |
T Consensus 9 ~~~i~~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~-~~~~~~~~~L~~~G~~Vi~~D~rG-------------h~ 74 (305)
T 1tht_A 9 AHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRM-DHFAGLAEYLSTNGFHVFRYDSLH-------------HV 74 (305)
T ss_dssp EEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGG-GGGHHHHHHHHTTTCCEEEECCCB-------------CC
T ss_pred EEEEEcCCCCEEEEEEecCcccCCCCCCEEEEecCCccCc-hHHHHHHHHHHHCCCEEEEeeCCC-------------CC
Confidence 445555 788999887653 347999999999994 899999999999899999999999 9
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHHHHHH---hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHH
Q psy4974 146 GQSLPKGRSFVPFQYIEEDVDIAYELLKL---LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRV 222 (345)
Q Consensus 146 G~s~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 222 (345)
|.|+.+...+ +++++++|+.++++. ++.++++|+||||||.+|+.+|.+ | +|+++|++++...........
T Consensus 75 G~S~~~~~~~----~~~~~~~D~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~~ 148 (305)
T 1tht_A 75 GLSSGSIDEF----TMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEKA 148 (305)
T ss_dssp --------CC----CHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHHH
T ss_pred CCCCCcccce----ehHHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHHH
Confidence 9997665555 455666666665554 488899999999999999999988 7 899999988754311110000
Q ss_pred HHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhC-chhhhccCCCCCCCEEEEEeCCCCCCChHHH
Q psy4974 223 FEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYG-RNVYQELLPYVDVPVLVFHSADDVMVSTQQV 301 (345)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~ 301 (345)
.. ........... ....... ........+....... ... ..+....+.++++|+|+++|++|.++|++.+
T Consensus 149 ~~-~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 219 (305)
T 1tht_A 149 LG-FDYLSLPIDEL----PNDLDFE--GHKLGSEVFVRDCFEH--HWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEV 219 (305)
T ss_dssp HS-SCGGGSCGGGC----CSEEEET--TEEEEHHHHHHHHHHT--TCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHH
T ss_pred hh-hhhhhcchhhC----ccccccc--ccccCHHHHHHHHHhc--cccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHH
Confidence 00 00000000000 0000000 0000001111111000 000 0112345778999999999999999999999
Q ss_pred HHHHhhc--CCcEEEEeCCCCCcccccChHHHH
Q psy4974 302 QSLLNQL--KFCQYYQFSSGGHSCHIKHGQVFN 332 (345)
Q Consensus 302 ~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~ 332 (345)
+.+++.+ +++++++++++||.++ ++|+.+.
T Consensus 220 ~~l~~~i~~~~~~l~~i~~agH~~~-e~p~~~~ 251 (305)
T 1tht_A 220 YDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLR 251 (305)
T ss_dssp HHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHH
T ss_pred HHHHHhcCCCCcEEEEeCCCCCchh-hCchHHH
Confidence 9999977 4789999999999986 8887543
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-29 Score=214.64 Aligned_cols=223 Identities=16% Similarity=0.189 Sum_probs=145.2
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
+|+|||+||++++. ..|..+++.|++.||+|+++|+|| ||.|+.+. .+ +++++++++.+++
T Consensus 16 ~~~vvllHG~~~~~-~~w~~~~~~L~~~~~~vi~~Dl~G-------------hG~S~~~~-~~----~~~~~a~~l~~~l 76 (264)
T 1r3d_A 16 TPLVVLVHGLLGSG-ADWQPVLSHLARTQCAALTLDLPG-------------HGTNPERH-CD----NFAEAVEMIEQTV 76 (264)
T ss_dssp BCEEEEECCTTCCG-GGGHHHHHHHTTSSCEEEEECCTT-------------CSSCC------------CHHHHHHHHHH
T ss_pred CCcEEEEcCCCCCH-HHHHHHHHHhcccCceEEEecCCC-------------CCCCCCCC-cc----CHHHHHHHHHHHH
Confidence 37899999999995 999999999986679999999999 99997542 22 5677899999999
Q ss_pred HHhCCcc--EEEEEeChhHHHHHH---HHHhCCcccceeeEeccCCCCCchhHHHHHHh------HhccCCChhhHHHHH
Q psy4974 173 KLLGVCK--VSLFGWCDGGHLSFV---FSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM------RRLSNWSPMARSEVL 241 (345)
Q Consensus 173 ~~~~~~~--i~lvGhS~Gg~ia~~---~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 241 (345)
+.++.++ ++|+||||||.+|+. +|.++|++|+++|++++............... ...... .......
T Consensus 77 ~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 154 (264)
T 1r3d_A 77 QAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQ--PIEHVLS 154 (264)
T ss_dssp HTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHS--CHHHHHH
T ss_pred HHhCcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccc--cHHHHHH
Confidence 9998876 999999999999999 88899999999999987654322211110000 000000 0011111
Q ss_pred HHcccC--CchhhhhHHHHH--------HHHHHHHHhh---CchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc
Q psy4974 242 KAYDND--VNYITGIFNQYV--------DMVNLIFKSY---GRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL 308 (345)
Q Consensus 242 ~~~~~~--~~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~ 308 (345)
.++... ............ ......+... ...+....+.++++|+++|+|++|..++ .+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~ 229 (264)
T 1r3d_A 155 DWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESS 229 (264)
T ss_dssp HHTTSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHHH
T ss_pred HHhhhhhhhccCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-----HHHHHh
Confidence 111110 000000000000 0111111111 0112334466789999999999997542 233333
Q ss_pred CCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 309 KFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 309 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+ .++++++++||++++|+|+++++.|.+||.+.
T Consensus 230 ~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 230 G-LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp C-SEEEEETTCCSCHHHHCHHHHHHHHHHHHHHH
T ss_pred C-CcEEEcCCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 3 67999999999999999999999999999764
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.96 E-value=9.4e-29 Score=218.60 Aligned_cols=246 Identities=13% Similarity=0.095 Sum_probs=155.5
Q ss_pred eeeEEEcC----ceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCC
Q psy4974 74 EGFFSIKG----CDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQS 148 (345)
Q Consensus 74 ~~~~~~~g----~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s 148 (345)
...+.+++ ..++|...|.+.|+|||+||++++. ..|..+++.|++ .+|+|+++|+|| ||.|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~g~~~p~lvllHG~~~~~-~~w~~~~~~L~~~~~~~via~Dl~G-------------hG~S 80 (316)
T 3c5v_A 15 MEDVEVENETGKDTFRVYKSGSEGPVLLLLHGGGHSA-LSWAVFTAAIISRVQCRIVALDLRS-------------HGET 80 (316)
T ss_dssp EEEEEEEETTEEEEEEEEEECSSSCEEEEECCTTCCG-GGGHHHHHHHHTTBCCEEEEECCTT-------------STTC
T ss_pred cceEEecCCcceEEEEEEecCCCCcEEEEECCCCccc-ccHHHHHHHHhhcCCeEEEEecCCC-------------CCCC
Confidence 34555655 4788888886567999999999884 999999999987 259999999999 9999
Q ss_pred CCCC-CCCCCccchHHHHHHHHHHHHHh--CC-ccEEEEEeChhHHHHHHHHHh--CCcccceeeEeccCCCCCchhHHH
Q psy4974 149 LPKG-RSFVPFQYIEEDVDIAYELLKLL--GV-CKVSLFGWCDGGHLSFVFSMK--YPHMVHKLVIWGTKSFLTIDNVRV 222 (345)
Q Consensus 149 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~--~~-~~i~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~ 222 (345)
+.+. ..| +++++++++.++++++ +. ++++|+||||||.+|+.+|.+ +|+ |+++|++++...........
T Consensus 81 ~~~~~~~~----~~~~~a~dl~~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~ 155 (316)
T 3c5v_A 81 KVKNPEDL----SAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNS 155 (316)
T ss_dssp BCSCTTCC----CHHHHHHHHHHHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHH
T ss_pred CCCCcccc----CHHHHHHHHHHHHHHHhccCCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHH
Confidence 7543 334 7888899999999999 66 689999999999999999986 576 99999998743211000000
Q ss_pred HH-HhHhccCCChhhHHHHH-------------------HHcccCCchhh---------hhHHHHHHHHHHHHHhhCchh
Q psy4974 223 FE-GMRRLSNWSPMARSEVL-------------------KAYDNDVNYIT---------GIFNQYVDMVNLIFKSYGRNV 273 (345)
Q Consensus 223 ~~-~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 273 (345)
.. ................. ........... ..+..........+... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 234 (316)
T 3c5v_A 156 MQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGW-FRG 234 (316)
T ss_dssp HHHHHHHSCSCBSSHHHHHHHHHHTTSCCCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHH-HTT
T ss_pred HHHHHhhCccccccHHHHHHHhhhcccccchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhh-hhh
Confidence 00 00000000000000000 00000000000 00000000000000000 000
Q ss_pred hhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 274 YQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 274 ~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
....+.++++|+|+|+|++|.+.+.... ....++.++++++++||++++|+|+++++.|.+||.+.
T Consensus 235 ~~~~~~~i~~P~Lli~g~~D~~~~~~~~---~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 300 (316)
T 3c5v_A 235 LSNLFLSCPIPKLLLLAGVDRLDKDLTI---GQMQGKFQMQVLPQCGHAVHEDAPDKVAEAVATFLIRH 300 (316)
T ss_dssp HHHHHHHSSSCEEEEESSCCCCCHHHHH---HHHTTCSEEEECCCCSSCHHHHSHHHHHHHHHHHHHHT
T ss_pred hHHHhhcCCCCEEEEEecccccccHHHH---HhhCCceeEEEcCCCCCcccccCHHHHHHHHHHHHHhc
Confidence 1112335789999999999987543322 22346789999999999999999999999999999754
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.5e-32 Score=236.45 Aligned_cols=250 Identities=16% Similarity=0.190 Sum_probs=171.3
Q ss_pred ceeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 72 FTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 72 ~~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
++..+++++|..++|...|++ |+|||+||++++. ..|..+++.|+ +||+|+++|+|| ||.|..+
T Consensus 5 ~~~~~~~~~g~~~~~~~~g~~-p~vv~lHG~~~~~-~~~~~~~~~l~-~g~~v~~~D~~G-------------~G~s~~~ 68 (304)
T 3b12_A 5 FERRLVDVGDVTINCVVGGSG-PALLLLHGFPQNL-HMWARVAPLLA-NEYTVVCADLRG-------------YGGSSKP 68 (304)
Confidence 346778889999999998855 6899999999995 99999999998 679999999999 9999876
Q ss_pred -----CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh
Q psy4974 152 -----GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM 226 (345)
Q Consensus 152 -----~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 226 (345)
...+ +++++++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++...............
T Consensus 69 ~~~~~~~~~----~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 144 (304)
T 3b12_A 69 VGAPDHANY----SFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVA 144 (304)
Confidence 2333 6777899999999999989999999999999999999999999999999998654322111000000
Q ss_pred Hh------------ccC-C----ChhhHHH--HHHHcccCCchhhhhHHHHH---------HHHHHHHHhhCchhh----
Q psy4974 227 RR------------LSN-W----SPMARSE--VLKAYDNDVNYITGIFNQYV---------DMVNLIFKSYGRNVY---- 274 (345)
Q Consensus 227 ~~------------~~~-~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---- 274 (345)
.. ... . ....... +.................+. ......+......+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (304)
T 3b12_A 145 RAYWHWYFLQQPAPYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDH 224 (304)
Confidence 00 000 0 0000000 00000000000000000000 111111111111111
Q ss_pred hccCCCCCCCEEEEEeCCCC-CCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 275 QELLPYVDVPVLVFHSADDV-MVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 275 ~~~l~~i~~Pvl~i~G~~D~-~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
...+.++++|+|+|+|++|. +.+....+.+.+..+++++.++ ++||+++.++|+++++.|.+||++.
T Consensus 225 ~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~ 292 (304)
T 3b12_A 225 GDLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPRLANMRFASL-PGGHFFVDRFPDDTARILREFLSDA 292 (304)
Confidence 11167889999999999995 4466777777777888899999 9999999999999999999999865
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=208.63 Aligned_cols=195 Identities=16% Similarity=0.188 Sum_probs=164.1
Q ss_pred ceeeeEEEcCceEEEEEc----CCCCceEEEEcCcCCCchhhHHH--HHHhhCCCCeEEEEeCCCCchhhhccCCccCCC
Q psy4974 72 FTEGFFSIKGCDIRFIKY----GSGAQVLFFTYGVLGEIRNSFKK--QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGY 145 (345)
Q Consensus 72 ~~~~~~~~~g~~l~~~~~----g~~~p~vv~lHG~~~~~~~~~~~--~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~ 145 (345)
++..+++.+|.+++|... ++..|+||++||++++. ..|.. +++.|+++||.|+++|+|| +
T Consensus 7 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~hG~~~~~-~~~~~~~~~~~l~~~G~~v~~~d~~g-------------~ 72 (210)
T 1imj_A 7 QREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSS-ETWQNLGTLHRLAQAGYRAVAIDLPG-------------L 72 (210)
T ss_dssp ECCCCEEETTEEECEEEEECSSSCCSCEEEECCCTTCCH-HHHHHHTHHHHHHHTTCEEEEECCTT-------------S
T ss_pred cccceEeeCCeEEEEEEeCCCCCCCCceEEEECCCCCcc-ceeecchhHHHHHHCCCeEEEecCCC-------------C
Confidence 346778889999999986 23457999999999995 88988 5899999999999999999 9
Q ss_pred CCCCCCCCCCCCccchHHHH--HHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHH
Q psy4974 146 GQSLPKGRSFVPFQYIEEDV--DIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVF 223 (345)
Q Consensus 146 G~s~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 223 (345)
|.|..+...+ ++.+.+ +++.++++.++.++++++|||+||.+++.+|..+|++++++|++++......
T Consensus 73 g~s~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~------ 142 (210)
T 1imj_A 73 GHSKEAAAPA----PIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI------ 142 (210)
T ss_dssp GGGTTSCCSS----CTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS------
T ss_pred CCCCCCCCcc----hhhhcchHHHHHHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccccc------
Confidence 9987665443 233334 7888889999989999999999999999999999999999999998754100
Q ss_pred HHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHH
Q psy4974 224 EGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQS 303 (345)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~ 303 (345)
....+..+++|+++++|++|. ++.+..+.
T Consensus 143 --------------------------------------------------~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~ 171 (210)
T 1imj_A 143 --------------------------------------------------NAANYASVKTPALIVYGDQDP-MGQTSFEH 171 (210)
T ss_dssp --------------------------------------------------CHHHHHTCCSCEEEEEETTCH-HHHHHHHH
T ss_pred --------------------------------------------------cchhhhhCCCCEEEEEcCccc-CCHHHHHH
Confidence 011223568999999999999 99999999
Q ss_pred HHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 304 LLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 304 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+ +.+++.++.+++++||+.+.++|+++.+.|.+||++.
T Consensus 172 ~-~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 172 L-KQLPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 209 (210)
T ss_dssp H-TTSSSEEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred H-hhCCCCCEEEecCCCcchhhcCHHHHHHHHHHHHHhc
Confidence 9 8889999999999999999999999999999999864
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-28 Score=218.06 Aligned_cols=248 Identities=15% Similarity=0.137 Sum_probs=160.9
Q ss_pred EcCceEEEEEc--CC-------CCceEEEEcCcCCCchhhHHHHHH------hhCCCCeEEEEeCCCCchhhhccCCccC
Q psy4974 79 IKGCDIRFIKY--GS-------GAQVLFFTYGVLGEIRNSFKKQLT------AFDPKLFTSIFWDPPGNVVLYLLGKTCS 143 (345)
Q Consensus 79 ~~g~~l~~~~~--g~-------~~p~vv~lHG~~~~~~~~~~~~~~------~L~~~G~~vi~~D~~G~~~~~~~g~~~~ 143 (345)
.+|..+++... +. ..|+||++||++++. ..|..+.. .|+++||+|+++|+||
T Consensus 35 ~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~-~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G------------ 101 (377)
T 1k8q_A 35 EDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASA-TNWISNLPNNSLAFILADAGYDVWLGNSRG------------ 101 (377)
T ss_dssp TTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCG-GGGSSSCTTTCHHHHHHHTTCEEEECCCTT------------
T ss_pred CCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCch-hhhhcCCCcccHHHHHHHCCCCEEEecCCC------------
Confidence 48888888765 22 347999999999995 88876554 8888899999999999
Q ss_pred CCCCCCCC-----CC-CCCCccchHHHHH-HHHHH----HHHhCCccEEEEEeChhHHHHHHHHHhCCc---ccceeeEe
Q psy4974 144 GYGQSLPK-----GR-SFVPFQYIEEDVD-IAYEL----LKLLGVCKVSLFGWCDGGHLSFVFSMKYPH---MVHKLVIW 209 (345)
Q Consensus 144 ~~G~s~~~-----~~-~~~~~~~~~~~~~-~~~~~----l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~ 209 (345)
||.|... .. .+ ...++.++++ |+.++ ++.++.++++++||||||.+|+.+|.++|+ +|+++|++
T Consensus 102 -~G~S~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~ 179 (377)
T 1k8q_A 102 -NTWARRNLYYSPDSVEF-WAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYAL 179 (377)
T ss_dssp -STTSCEESSSCTTSTTT-TCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEE
T ss_pred -CCCCCCCCCCCCCcccc-cCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEe
Confidence 9999752 21 00 0225666666 55554 456788899999999999999999999998 89999999
Q ss_pred ccCCCCCchhHHH--HHH-----hHhccC----CC-hhhHHHHHHHc------------------ccCC-chhhhhHHHH
Q psy4974 210 GTKSFLTIDNVRV--FEG-----MRRLSN----WS-PMARSEVLKAY------------------DNDV-NYITGIFNQY 258 (345)
Q Consensus 210 ~~~~~~~~~~~~~--~~~-----~~~~~~----~~-~~~~~~~~~~~------------------~~~~-~~~~~~~~~~ 258 (345)
+|........... ... +..... .. ......+...+ .... .........+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (377)
T 1k8q_A 180 APVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVY 259 (377)
T ss_dssp SCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHH
T ss_pred CCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHH
Confidence 9876432211000 000 000000 00 00000000000 0000 0000000000
Q ss_pred ------------HHHHHHHHHh--hCch----------------hhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc
Q psy4974 259 ------------VDMVNLIFKS--YGRN----------------VYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL 308 (345)
Q Consensus 259 ------------~~~~~~~~~~--~~~~----------------~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~ 308 (345)
...+...... .... .....+.++++|+|+++|++|.++|.+.++.+.+.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~ 339 (377)
T 1k8q_A 260 LSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKL 339 (377)
T ss_dssp HTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTC
T ss_pred hccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhC
Confidence 0011111000 0000 012236788999999999999999999999999999
Q ss_pred CCcE-EEEeCCCCCcccc---cChHHHHHHHHHHHHh
Q psy4974 309 KFCQ-YYQFSSGGHSCHI---KHGQVFNEISRNFILE 341 (345)
Q Consensus 309 ~~~~-~~~~~~~gH~~~~---~~~~~~~~~i~~fl~~ 341 (345)
++.+ +++++++||+.++ ++|+++.+.|.+||++
T Consensus 340 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 340 PNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp TTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred cCcccEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 9987 9999999999996 8899999999999975
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.3e-28 Score=206.43 Aligned_cols=220 Identities=15% Similarity=0.160 Sum_probs=158.2
Q ss_pred CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
.++|+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|......+ ++++.++++.+
T Consensus 18 ~~~~~vv~~HG~~~~~-~~~~~~~~~l~~~-~~v~~~d~~G-------------~G~s~~~~~~~----~~~~~~~~~~~ 78 (267)
T 3fla_A 18 DARARLVCLPHAGGSA-SFFFPLAKALAPA-VEVLAVQYPG-------------RQDRRHEPPVD----SIGGLTNRLLE 78 (267)
T ss_dssp TCSEEEEEECCTTCCG-GGGHHHHHHHTTT-EEEEEECCTT-------------SGGGTTSCCCC----SHHHHHHHHHH
T ss_pred CCCceEEEeCCCCCCc-hhHHHHHHHhccC-cEEEEecCCC-------------CCCCCCCCCCc----CHHHHHHHHHH
Confidence 4558999999999995 9999999999887 9999999999 99997655444 78888999999
Q ss_pred HHHHhCCccEEEEEeChhHHHHHHHHHhCCcc----cceeeEeccCCCCCch--------hHHHHHHhHhccCCChhhHH
Q psy4974 171 LLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHM----VHKLVIWGTKSFLTID--------NVRVFEGMRRLSNWSPMARS 238 (345)
Q Consensus 171 ~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 238 (345)
+++.++.++++|+|||+||.+|+.+|.++|++ +++++++++....... .......+... .....
T Consensus 79 ~l~~~~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~- 154 (267)
T 3fla_A 79 VLRPFGDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKL---GGSDA- 154 (267)
T ss_dssp HTGGGTTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHT---CHHHH-
T ss_pred HHHhcCCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHh---cCcch-
Confidence 99999889999999999999999999999986 9999999876432211 00011111100 00000
Q ss_pred HHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC-cEEEEeC
Q psy4974 239 EVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF-CQYYQFS 317 (345)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~ 317 (345)
..+.. ..........+...+.......... ...+++|+++++|++|.++|.+..+.+.+.+++ +++++++
T Consensus 155 ---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (267)
T 3fla_A 155 ---AMLAD-----PELLAMVLPAIRSDYRAVETYRHEP-GRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTGPADLRVLP 225 (267)
T ss_dssp ---HHHHS-----HHHHHHHHHHHHHHHHHHHHCCCCT-TCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSSCEEEEEES
T ss_pred ---hhccC-----HHHHHHHHHHHHHHHHhhhcccccc-cCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCceEEEec
Confidence 00000 0011111111111111111111111 257899999999999999999999999999987 8999999
Q ss_pred CCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 318 SGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 318 ~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+ ||+.+.++|+++.+.|.+||++..
T Consensus 226 g-gH~~~~~~~~~~~~~i~~fl~~~~ 250 (267)
T 3fla_A 226 G-GHFFLVDQAAPMIATMTEKLAGPA 250 (267)
T ss_dssp S-STTHHHHTHHHHHHHHHHHTC---
T ss_pred C-CceeeccCHHHHHHHHHHHhcccc
Confidence 7 999999999999999999997653
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-27 Score=213.96 Aligned_cols=249 Identities=15% Similarity=0.148 Sum_probs=165.6
Q ss_pred eeeEEEcCceEEEEEcCC---CCceEEEEcCcCCCchhhHHHHHHhhCCC---------CeEEEEeCCCCchhhhccCCc
Q psy4974 74 EGFFSIKGCDIRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQLTAFDPK---------LFTSIFWDPPGNVVLYLLGKT 141 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~~~L~~~---------G~~vi~~D~~G~~~~~~~g~~ 141 (345)
...++++|..|+|...++ +.++|||+||++++. ..|..+++.|.+. ||+|+++|+||
T Consensus 70 ~~~~~i~g~~i~~~~~~~~~~~~~plll~HG~~~s~-~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G---------- 138 (388)
T 4i19_A 70 QFTTEIDGATIHFLHVRSPEPDATPMVITHGWPGTP-VEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPG---------- 138 (388)
T ss_dssp EEEEEETTEEEEEEEECCSSTTCEEEEEECCTTCCG-GGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTT----------
T ss_pred cEEEEECCeEEEEEEccCCCCCCCeEEEECCCCCCH-HHHHHHHHHHhCcccccCCCCCCeEEEEEcCCC----------
Confidence 455678999999987632 347999999999995 9999999999885 79999999999
Q ss_pred cCCCCCCCCCCC-CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch--
Q psy4974 142 CSGYGQSLPKGR-SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID-- 218 (345)
Q Consensus 142 ~~~~G~s~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-- 218 (345)
||.|+.+.. .+ ++.+.++++.++++.++.++++++||||||.+++.+|.++|++|++++++++.......
T Consensus 139 ---~G~S~~~~~~~~----~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 211 (388)
T 4i19_A 139 ---FGLSGPLKSAGW----ELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTNLSGEPG 211 (388)
T ss_dssp ---SGGGCCCSSCCC----CHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCCBCCCGG
T ss_pred ---CCCCCCCCCCCC----CHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCCCCCccc
Confidence 999987654 34 78888999999999999999999999999999999999999999999999975443210
Q ss_pred --------hHHHHHHhHhc----------cCCChh------------hHHHHHHHc----ccCCch-hhhhHHHHHHH--
Q psy4974 219 --------NVRVFEGMRRL----------SNWSPM------------ARSEVLKAY----DNDVNY-ITGIFNQYVDM-- 261 (345)
Q Consensus 219 --------~~~~~~~~~~~----------~~~~~~------------~~~~~~~~~----~~~~~~-~~~~~~~~~~~-- 261 (345)
........... ....+. ....+...+ ...... .....+.....
T Consensus 212 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~dsp~gl~a~i~ek~~~w~~~~~~~~~~~~~d~ll~~~~ 291 (388)
T 4i19_A 212 ELETLSDADKARLAVSERFLDDLSGPMKMQSTRPHTIGYMLNDSPVAQLAYLLEMFKHWAQTENVPEDAVDRDLMLTHIS 291 (388)
T ss_dssp GGGGCCHHHHHHHHTHHHHHHHTCHHHHHHTTCHHHHHHHHHTCHHHHHHHHHHHHHHTSCCSSSGGGTSCHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHcCChHHHHhcCCchhhhhHhhCCHHHHHHHHHHHHHHhcCCCCCcccCCCHHHHHHHHH
Confidence 11111111000 000000 000111111 100000 00000111111
Q ss_pred ----------HHHHHHhhC--chh--hhccCCCCCCCEEEEEeCCCCCCChH-HHHHHHhhcCCcEEEEeCCCCCccccc
Q psy4974 262 ----------VNLIFKSYG--RNV--YQELLPYVDVPVLVFHSADDVMVSTQ-QVQSLLNQLKFCQYYQFSSGGHSCHIK 326 (345)
Q Consensus 262 ----------~~~~~~~~~--~~~--~~~~l~~i~~Pvl~i~G~~D~~v~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~ 326 (345)
....+.... ... ....+..+++|+++++|.+|...++. ..+.... +.+.+.+++++||++++|
T Consensus 292 ~y~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~i~vP~~v~~g~~D~~~~p~~~~~~~~~--~~~~~~~~~~gGHf~~~E 369 (388)
T 4i19_A 292 LFWFTATGGSAAQAHYELKPFLPITSLIGRSPTLDVPMGVAVYPGALFQPVRSLAERDFK--QIVHWAELDRGGHFSAME 369 (388)
T ss_dssp HHHHHTCHHHHHHHHHHTGGGCTTTCCBCCCCCBCSCEEEEECTBCSSCCCHHHHHHHBT--TEEEEEECSSCBSSHHHH
T ss_pred HHHhcCCchhHHHHHHHhhcccccccccccCCCCCCCEEEEeCCcccccccHHHHHHhCC--CeEEEEECCCCcCccchh
Confidence 011111111 000 12256678999999999999655443 3333222 225778899999999999
Q ss_pred ChHHHHHHHHHHHHhh
Q psy4974 327 HGQVFNEISRNFILEE 342 (345)
Q Consensus 327 ~~~~~~~~i~~fl~~~ 342 (345)
+|+.+++.|.+|+++.
T Consensus 370 ~Pe~~~~~l~~fl~~~ 385 (388)
T 4i19_A 370 EPDLFVDDLRTFNRTL 385 (388)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHH
Confidence 9999999999999864
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.1e-28 Score=204.01 Aligned_cols=220 Identities=13% Similarity=0.055 Sum_probs=159.2
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCcc-chHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQ-YIEEDVDIAYE 170 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~-~~~~~~~~~~~ 170 (345)
+.|+||++||++++. ..|..+++.|+++||.|+++|+|| ||.|+.... ... +++++++++.+
T Consensus 21 ~~~~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g-------------~g~s~~~~~---~~~~~~~~~~~d~~~ 83 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSP-NDMNFMARALQRSGYGVYVPLFSG-------------HGTVEPLDI---LTKGNPDIWWAESSA 83 (251)
T ss_dssp SSEEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEECCCTT-------------CSSSCTHHH---HHHCCHHHHHHHHHH
T ss_pred CCceEEEeCCCCCCH-HHHHHHHHHHHHCCCEEEecCCCC-------------CCCCChhhh---cCcccHHHHHHHHHH
Confidence 447999999999995 899999999998899999999999 999854321 122 56677788877
Q ss_pred HHHHhCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCC
Q psy4974 171 LLKLLGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDV 248 (345)
Q Consensus 171 ~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (345)
+++.+... +++++|||+||.+++.+|.++|+.++++++++|............. .....+........
T Consensus 84 ~i~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 153 (251)
T 3dkr_A 84 AVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFL----------KYAEYMNRLAGKSD 153 (251)
T ss_dssp HHHHHHTTCSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHH----------HHHHHHHHHHTCCC
T ss_pred HHHHHHHhcCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHH----------HHHHHHHhhcccCc
Confidence 77777544 9999999999999999999999999999999987664332221110 01111111111110
Q ss_pred --chhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC-c--EEEEeCCCCCcc
Q psy4974 249 --NYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF-C--QYYQFSSGGHSC 323 (345)
Q Consensus 249 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~-~--~~~~~~~~gH~~ 323 (345)
..+..........+..... .....+.++++|+++++|++|.++|.+..+.+.+.+++ . ++++++++||..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 228 (251)
T 3dkr_A 154 ESTQILAYLPGQLAAIDQFAT-----TVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVI 228 (251)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-----HHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCT
T ss_pred chhhHHhhhHHHHHHHHHHHH-----HHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCCCCccc
Confidence 0111111111111111111 12445667899999999999999999999999998876 5 899999999999
Q ss_pred cccC-hHHHHHHHHHHHHhhc
Q psy4974 324 HIKH-GQVFNEISRNFILEEN 343 (345)
Q Consensus 324 ~~~~-~~~~~~~i~~fl~~~~ 343 (345)
+.+. ++++.+.|.+||++..
T Consensus 229 ~~~~~~~~~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 229 TVNSAHHALEEDVIAFMQQEN 249 (251)
T ss_dssp TTSTTHHHHHHHHHHHHHTTC
T ss_pred ccccchhHHHHHHHHHHHhhc
Confidence 8875 9999999999998764
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.95 E-value=5.4e-27 Score=197.60 Aligned_cols=216 Identities=14% Similarity=0.089 Sum_probs=160.9
Q ss_pred eeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
+..+++.+|..+.+.......|+||++||++++. ..|..+++.|+++||.|+++|+|| +|.|..+.
T Consensus 4 ~~~~~~~~g~~~~~~~~~~~~~~vv~~hG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g-------------~g~s~~~~ 69 (238)
T 1ufo_A 4 RTERLTLAGLSVLARIPEAPKALLLALHGLQGSK-EHILALLPGYAERGFLLLAFDAPR-------------HGEREGPP 69 (238)
T ss_dssp EEEEEEETTEEEEEEEESSCCEEEEEECCTTCCH-HHHHHTSTTTGGGTEEEEECCCTT-------------STTSSCCC
T ss_pred eecccccCCEEEEEEecCCCccEEEEECCCcccc-hHHHHHHHHHHhCCCEEEEecCCC-------------CccCCCCC
Confidence 3567788998886554444668999999999995 899999999999999999999999 99987654
Q ss_pred CCCCC--------ccchHHHHHHHHHHHHHh---CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHH
Q psy4974 153 RSFVP--------FQYIEEDVDIAYELLKLL---GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVR 221 (345)
Q Consensus 153 ~~~~~--------~~~~~~~~~~~~~~l~~~---~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 221 (345)
... . ..++.+.++++.++++.+ +.++++++|||+||.+|+.+|.++|+.+.+++++++.........
T Consensus 70 ~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~- 147 (238)
T 1ufo_A 70 PSS-KSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQG- 147 (238)
T ss_dssp CCT-TSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTT-
T ss_pred Ccc-cccchhhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhhh-
Confidence 332 1 012445566666555543 457999999999999999999999998999998887654321110
Q ss_pred HHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCC-CCCEEEEEeCCCCCCChHH
Q psy4974 222 VFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYV-DVPVLVFHSADDVMVSTQQ 300 (345)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvl~i~G~~D~~v~~~~ 300 (345)
.....+ . ...+.. .+....+.++ ++|+++++|++|.++|.+.
T Consensus 148 -------~~~~~~------------------~---------~~~~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 190 (238)
T 1ufo_A 148 -------QVVEDP------------------G---------VLALYQ---APPATRGEAYGGVPLLHLHGSRDHIVPLAR 190 (238)
T ss_dssp -------CCCCCH------------------H---------HHHHHH---SCGGGCGGGGTTCCEEEEEETTCTTTTHHH
T ss_pred -------hccCCc------------------c---------cchhhc---CChhhhhhhccCCcEEEEECCCCCccCcHH
Confidence 000000 0 001111 1223445566 8999999999999999999
Q ss_pred HHHHHhhcC------CcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 301 VQSLLNQLK------FCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 301 ~~~~~~~~~------~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
++.+.+.++ +.++++++++||..+.+.++++.+.+.+||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 191 MEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEA 237 (238)
T ss_dssp HHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHHHHhc
Confidence 999999888 88999999999999988888888888888764
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7e-27 Score=202.78 Aligned_cols=213 Identities=14% Similarity=0.103 Sum_probs=149.1
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|+|||+||++++. ..|..+++.|.+ ||+|+++|+|| ||.|......+ +++++++++.++++
T Consensus 52 ~~lvllHG~~~~~-~~~~~l~~~L~~-~~~v~~~D~~G-------------~G~S~~~~~~~----~~~~~a~~~~~~l~ 112 (280)
T 3qmv_A 52 LRLVCFPYAGGTV-SAFRGWQERLGD-EVAVVPVQLPG-------------RGLRLRERPYD----TMEPLAEAVADALE 112 (280)
T ss_dssp EEEEEECCTTCCG-GGGTTHHHHHCT-TEEEEECCCTT-------------SGGGTTSCCCC----SHHHHHHHHHHHHH
T ss_pred ceEEEECCCCCCh-HHHHHHHHhcCC-CceEEEEeCCC-------------CCCCCCCCCCC----CHHHHHHHHHHHHH
Confidence 7899999999995 999999999998 79999999999 99997655444 78899999999999
Q ss_pred Hh-CCccEEEEEeChhHHHHHHHHHhCCcccc----eeeEeccCCCCCchh--------HHHHHHhHhccCCChhhHHHH
Q psy4974 174 LL-GVCKVSLFGWCDGGHLSFVFSMKYPHMVH----KLVIWGTKSFLTIDN--------VRVFEGMRRLSNWSPMARSEV 240 (345)
Q Consensus 174 ~~-~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~----~lvl~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 240 (345)
.+ +.++++|+||||||.+|+.+|.++|+++. .++++++........ ......+...........
T Consensus 113 ~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 189 (280)
T 3qmv_A 113 EHRLTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADT--- 189 (280)
T ss_dssp HTTCSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC-------
T ss_pred HhCCCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhh---
Confidence 99 77899999999999999999999998877 777776543211100 011111111111100000
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC-cEEEEeCCC
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF-CQYYQFSSG 319 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~ 319 (345)
... .+..... ..+...+....... ...+..+++|+++|+|++|.+++.+..+.+.+.+++ .++++++ +
T Consensus 190 ----~~~-~~~~~~~----~~~~~~~~~~~~~~-~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-g 258 (280)
T 3qmv_A 190 ----LGA-AYFDRRL----PVLRADLRACERYD-WHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLP-G 258 (280)
T ss_dssp ----------CCTTH----HHHHHHHHHHHTCC-CCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSSCEEEEEEE-E
T ss_pred ----cCH-HHHHHHH----HHHHHHHHHHHhcc-ccCCCceecCeEEEEecCCCCcChHHHHHHHHhcCCceEEEEec-C
Confidence 000 0011111 11111111111111 223567899999999999999999999999998876 4667776 6
Q ss_pred CCcccc--cChHHHHHHHHHHH
Q psy4974 320 GHSCHI--KHGQVFNEISRNFI 339 (345)
Q Consensus 320 gH~~~~--~~~~~~~~~i~~fl 339 (345)
||+.++ ++++++++.|.+||
T Consensus 259 gH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 259 NHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp ETTGGGSSHHHHHHHHHHHTTC
T ss_pred CCeEEcCchhHHHHHHHHHhhC
Confidence 999999 89999999998875
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.94 E-value=8.3e-28 Score=210.83 Aligned_cols=223 Identities=10% Similarity=0.063 Sum_probs=153.5
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCC--CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPK--LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~--G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
.|+|||+||++++. ..|..+++.|+++ ||+|+++|+|| ||.|..+. ..++++.++++.+
T Consensus 36 ~~~vvllHG~~~~~-~~~~~~~~~L~~~~~g~~vi~~D~~G-------------~G~s~~~~-----~~~~~~~~~~l~~ 96 (302)
T 1pja_A 36 YKPVIVVHGLFDSS-YSFRHLLEYINETHPGTVVTVLDLFD-------------GRESLRPL-----WEQVQGFREAVVP 96 (302)
T ss_dssp CCCEEEECCTTCCG-GGGHHHHHHHHHHSTTCCEEECCSSC-------------SGGGGSCH-----HHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCh-hHHHHHHHHHHhcCCCcEEEEeccCC-------------CccchhhH-----HHHHHHHHHHHHH
Confidence 36999999999995 8999999999988 89999999999 99886442 2367778888888
Q ss_pred HHHHhCCccEEEEEeChhHHHHHHHHHhCCc-ccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccC--
Q psy4974 171 LLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH-MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDND-- 247 (345)
Q Consensus 171 ~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 247 (345)
+++.+ .++++++||||||.+|+.+|.++|+ +|+++|+++++............. ........... ...+...
T Consensus 97 ~~~~~-~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~ 171 (302)
T 1pja_A 97 IMAKA-PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKW--LFPTSMRSNLY--RICYSPWGQ 171 (302)
T ss_dssp HHHHC-TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHH--HCTTCCHHHHH--HHHTSTTGG
T ss_pred HhhcC-CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhh--HHHHHHHHHHh--hccchHHHH
Confidence 88887 6899999999999999999999999 799999999876432221111110 00111000000 0000000
Q ss_pred ----Cchh--hhhHHHHHH--HHHHHHHhh----CchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC-----
Q psy4974 248 ----VNYI--TGIFNQYVD--MVNLIFKSY----GRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF----- 310 (345)
Q Consensus 248 ----~~~~--~~~~~~~~~--~~~~~~~~~----~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~----- 310 (345)
..++ ......+.. .+....... ...++...+.+++ |+++|+|++|.++|++.++.+.+..++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~ 250 (302)
T 1pja_A 172 EFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLE 250 (302)
T ss_dssp GSTGGGGBCCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEEC
T ss_pred HhhhhhcccChhhhhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccc
Confidence 0000 000111100 001111000 1112355677889 999999999999998888877665555
Q ss_pred ----------------------cEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 311 ----------------------CQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 311 ----------------------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
+++++++++||+++.|+|+++++.|.+||+
T Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 302 (302)
T 1pja_A 251 MEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWLS 302 (302)
T ss_dssp GGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGCC
T ss_pred hhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHHhcC
Confidence 899999999999999999999999999873
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=9.3e-26 Score=205.25 Aligned_cols=249 Identities=15% Similarity=0.150 Sum_probs=158.8
Q ss_pred eeeEEEcCceEEEEEcCC---CCceEEEEcCcCCCchhhHHHHHHhhCC------CCeEEEEeCCCCchhhhccCCccCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQLTAFDP------KLFTSIFWDPPGNVVLYLLGKTCSG 144 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~~~L~~------~G~~vi~~D~~G~~~~~~~g~~~~~ 144 (345)
...+.++|..|+|...++ +.++|||+||++++. ..|..+++.|.+ .||+|+++|+||
T Consensus 87 ~~~~~i~g~~i~~~~~~~~~~~~~pllllHG~~~s~-~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG------------- 152 (408)
T 3g02_A 87 QFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSF-VEFYPILQLFREEYTPETLPFHLVVPSLPG------------- 152 (408)
T ss_dssp EEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCG-GGGHHHHHHHHHHCCTTTCCEEEEEECCTT-------------
T ss_pred CEEEEECCEEEEEEEecCCCCCCCeEEEECCCCCcH-HHHHHHHHHHhcccccccCceEEEEECCCC-------------
Confidence 455678999999999874 347999999999995 999999999876 589999999999
Q ss_pred CCCCCCCC--CCCCCccchHHHHHHHHHHHHHhCCc-cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCC-----
Q psy4974 145 YGQSLPKG--RSFVPFQYIEEDVDIAYELLKLLGVC-KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLT----- 216 (345)
Q Consensus 145 ~G~s~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~----- 216 (345)
||.|+.+. ..+ +++++++++.++++.++.+ +++++||||||.+++.+|.++|+.+..++.+.+.....
T Consensus 153 ~G~S~~~~~~~~~----~~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~~~~~~~ 228 (408)
T 3g02_A 153 YTFSSGPPLDKDF----GLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAPPEGPSI 228 (408)
T ss_dssp STTSCCSCSSSCC----CHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCCTTCCCG
T ss_pred CCCCCCCCCCCCC----CHHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCCcccccc
Confidence 99998765 334 7888899999999999997 99999999999999999999976444444443322211
Q ss_pred ----chhHHHHHHhHhccC--C--------Ch------------hhHHHHHHHcccCCchhhhhHHHHHHHHHH------
Q psy4974 217 ----IDNVRVFEGMRRLSN--W--------SP------------MARSEVLKAYDNDVNYITGIFNQYVDMVNL------ 264 (345)
Q Consensus 217 ----~~~~~~~~~~~~~~~--~--------~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 264 (345)
............... . .+ .....+...+..-.+. ....+..+..+..
T Consensus 229 ~~l~~~e~~~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~-~~~~d~ll~~v~~y~~t~~ 307 (408)
T 3g02_A 229 ESLSAAEKEGIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDK-PLPSETILEMVSLYWLTES 307 (408)
T ss_dssp GGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSS-CCCHHHHHHHHHHHHHTTH
T ss_pred cCCCHHHHHHHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCC-CCCHHHHHHHHHHHHhhcc
Confidence 111111111100000 0 00 0000011111000000 0000111111100
Q ss_pred ------HHHhhCchhhh-------ccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHH
Q psy4974 265 ------IFKSYGRNVYQ-------ELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVF 331 (345)
Q Consensus 265 ------~~~~~~~~~~~-------~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 331 (345)
.+......... ..+..+++|+++++|.+|.+.++....+.. .+.+.+.+++++||+.++|+|+++
T Consensus 308 ~~~s~~~y~e~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~p~~~~~~~--~~~~~~~~~~~gGHf~~lE~Pe~~ 385 (408)
T 3g02_A 308 FPRAIHTYREWVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPVPRSWIATT--GNLVFFRDHAEGGHFAALERPREL 385 (408)
T ss_dssp HHHHGGGHHHHTTC-------CTTTTTTCEEEEEEEEECTBSSSCCCHHHHGGG--EEEEEEEECSSCBSCHHHHCHHHH
T ss_pred chhHHHHHHhhcccccccccccccccCCCcCCCEEEEeCCcccccCcHHHHHhc--CCeeEEEECCCCcCchhhhCHHHH
Confidence 01111000000 035678999999999999776654332222 233678899999999999999999
Q ss_pred HHHHHHHHHhhc
Q psy4974 332 NEISRNFILEEN 343 (345)
Q Consensus 332 ~~~i~~fl~~~~ 343 (345)
++.|.+||.+..
T Consensus 386 ~~~l~~fl~~~~ 397 (408)
T 3g02_A 386 KTDLTAFVEQVW 397 (408)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH
Confidence 999999997653
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=8e-27 Score=203.16 Aligned_cols=222 Identities=13% Similarity=0.126 Sum_probs=161.6
Q ss_pred eeeEEEcCceEEEEEcCC-CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
...+..+|..+.+....+ ..|+||++||++++. ..|..+++.|+++||.|+++|+|| +|.|..+.
T Consensus 8 ~~~~~~~g~~l~~~~~~p~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G-------------~g~s~~~~ 73 (290)
T 3ksr_A 8 SIEIPVGQDELSGTLLTPTGMPGVLFVHGWGGSQ-HHSLVRAREAVGLGCICMTFDLRG-------------HEGYASMR 73 (290)
T ss_dssp EEEEEETTEEEEEEEEEEESEEEEEEECCTTCCT-TTTHHHHHHHHTTTCEEECCCCTT-------------SGGGGGGT
T ss_pred eEEecCCCeEEEEEEecCCCCcEEEEeCCCCCCc-CcHHHHHHHHHHCCCEEEEeecCC-------------CCCCCCCc
Confidence 344556888888877654 558999999999995 999999999999999999999999 99997665
Q ss_pred CCCCCccchHHHHHHHHHHHHHhC------CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLLG------VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM 226 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~------~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 226 (345)
..+ ++.+.++++.++++.+. .++++++|||+||.+++.++.++| ++++++++|...............
T Consensus 74 ~~~----~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~~~~ 147 (290)
T 3ksr_A 74 QSV----TRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPKVSL 147 (290)
T ss_dssp TTC----BHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBHHHH
T ss_pred ccc----cHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhcccccc
Confidence 444 66777888888888773 248999999999999999999988 899999988765332110000000
Q ss_pred HhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHh
Q psy4974 227 RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLN 306 (345)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~ 306 (345)
.. ...+ ..+... ... .........+.++++|+|+++|++|.+++.+..+.+.+
T Consensus 148 ~~--------~~~~-~~~~~~--~~~----------------~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~ 200 (290)
T 3ksr_A 148 NA--------DPDL-MDYRRR--ALA----------------PGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYAD 200 (290)
T ss_dssp HH--------STTH-HHHTTS--CCC----------------GGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHH
T ss_pred cC--------Chhh-hhhhhh--hhh----------------hccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHH
Confidence 00 0000 000000 000 00011122234578899999999999999999999999
Q ss_pred hcCCc---EEEEeCCCCCcccc-cChHHHHHHHHHHHHhh
Q psy4974 307 QLKFC---QYYQFSSGGHSCHI-KHGQVFNEISRNFILEE 342 (345)
Q Consensus 307 ~~~~~---~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 342 (345)
.+++. ++.+++++||.+.. +.++++.+.+.+||++.
T Consensus 201 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 240 (290)
T 3ksr_A 201 AFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLTEM 240 (290)
T ss_dssp HTTTSSEEEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred HhccCCCceEEEcCCCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 88754 59999999998765 47899999999999765
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.6e-26 Score=203.16 Aligned_cols=245 Identities=10% Similarity=0.013 Sum_probs=154.4
Q ss_pred cCceEEEEEcCC-CCceEEEEcCcCCCchhhHH----------------HHHHhhCCCCeEEEEeCCCCchhhhccCCcc
Q psy4974 80 KGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFK----------------KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTC 142 (345)
Q Consensus 80 ~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~----------------~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~ 142 (345)
++..+.|...+. +.|+||++||++++. ..|. .+++.|+++||+|+++|+||
T Consensus 36 ~~~~~~~~~~~~~~~~~vv~~hG~~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G----------- 103 (354)
T 2rau_A 36 DIISLHKVNLIGGGNDAVLILPGTWSSG-EQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRT----------- 103 (354)
T ss_dssp CEEEEEEEEETTCCEEEEEEECCTTCCH-HHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGG-----------
T ss_pred CceEEEeecccCCCCCEEEEECCCCCCc-cccccccccccccccccchhhHHHHHHhCCCEEEEecCCC-----------
Confidence 556777766543 347999999999995 7665 88899988899999999999
Q ss_pred CCCCCCCCCCCC-C--CCccchHHHHHHHHHHHHH----hCCccEEEEEeChhHHHHHHHHHhC-CcccceeeEeccCCC
Q psy4974 143 SGYGQSLPKGRS-F--VPFQYIEEDVDIAYELLKL----LGVCKVSLFGWCDGGHLSFVFSMKY-PHMVHKLVIWGTKSF 214 (345)
Q Consensus 143 ~~~G~s~~~~~~-~--~~~~~~~~~~~~~~~~l~~----~~~~~i~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~ 214 (345)
||.|...... + ....++.+.++++.++++. ++.++++++|||+||.+|+.+|.++ |++|+++|++++.+.
T Consensus 104 --~G~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~ 181 (354)
T 2rau_A 104 --HYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPT 181 (354)
T ss_dssp --GGCCTTCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCB
T ss_pred --CCCCCcccccccccccCCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEeccccc
Confidence 9999755430 0 0012566777777777776 5788999999999999999999999 999999999976543
Q ss_pred CCchhHH-------HHHHhHhcc--------CCCh--------------------hhHHHHHH-Hc---ccCC-chhhhh
Q psy4974 215 LTIDNVR-------VFEGMRRLS--------NWSP--------------------MARSEVLK-AY---DNDV-NYITGI 254 (345)
Q Consensus 215 ~~~~~~~-------~~~~~~~~~--------~~~~--------------------~~~~~~~~-~~---~~~~-~~~~~~ 254 (345)
....... ....+.... .+.. .....+.. .+ .... .+....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (354)
T 2rau_A 182 KHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSK 261 (354)
T ss_dssp CTTCC--CCCCSCSSHHHHHHHTCCEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTTCCC
T ss_pred ccCcccchhhhhhhhHHHhhhhcccccCCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcccCCCcc
Confidence 2100000 000000000 0000 01111110 01 0000 000000
Q ss_pred HHHHHHHHHHH-----HHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccCh-
Q psy4974 255 FNQYVDMVNLI-----FKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHG- 328 (345)
Q Consensus 255 ~~~~~~~~~~~-----~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~- 328 (345)
.......+... .......+....+.++++|+|+|+|++|.++|. ..+ ...+++++++++++||+.+++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~-~~~---~l~~~~~~~~~~~~gH~~~~~~~~ 337 (354)
T 2rau_A 262 KEDMFPILASFDPYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQIF-DSK---ILPSNSEIILLKGYGHLDVYTGEN 337 (354)
T ss_dssp HHHHHHHHHTSCSEEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHHB-CGG---GSCTTCEEEEETTCCGGGGTSSTT
T ss_pred HHHHHHHHhhhccccccccccCcccccccccCCCCEEEEecCCCCCCcc-chh---hhccCceEEEcCCCCCchhhcCCC
Confidence 11111111000 000111234567789999999999999987653 222 22367899999999999988665
Q ss_pred --HHHHHHHHHHHHhh
Q psy4974 329 --QVFNEISRNFILEE 342 (345)
Q Consensus 329 --~~~~~~i~~fl~~~ 342 (345)
+++++.|.+||++.
T Consensus 338 ~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 338 SEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp HHHHTHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhc
Confidence 99999999999875
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.7e-26 Score=181.58 Aligned_cols=171 Identities=13% Similarity=0.096 Sum_probs=142.0
Q ss_pred CCCceEEEEcCcCCCchhhHH--HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFK--KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~--~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.++|+||++||++++. ..|. .+.+.|.++||.|+++|+|| +|.|.... ....+.+.++++
T Consensus 2 ~~~~~vv~~HG~~~~~-~~~~~~~~~~~l~~~g~~v~~~d~~g-------------~g~s~~~~----~~~~~~~~~~~~ 63 (176)
T 2qjw_A 2 MSRGHCILAHGFESGP-DALKVTALAEVAERLGWTHERPDFTD-------------LDARRDLG----QLGDVRGRLQRL 63 (176)
T ss_dssp CSSCEEEEECCTTCCT-TSHHHHHHHHHHHHTTCEEECCCCHH-------------HHTCGGGC----TTCCHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCc-cHHHHHHHHHHHHHCCCEEEEeCCCC-------------CCCCCCCC----CCCCHHHHHHHH
Confidence 4567899999999884 6544 88899998899999999999 99886433 233567777887
Q ss_pred HHHHHHhC-CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccC
Q psy4974 169 YELLKLLG-VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDND 247 (345)
Q Consensus 169 ~~~l~~~~-~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
.++++... .++++++|||+||.+|+.++.++| ++++|+++|.......
T Consensus 64 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~----------------------------- 112 (176)
T 2qjw_A 64 LEIARAATEKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL----------------------------- 112 (176)
T ss_dssp HHHHHHHHTTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB-----------------------------
T ss_pred HHHHHhcCCCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcccc-----------------------------
Confidence 77777664 579999999999999999999998 9999999987653210
Q ss_pred CchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 248 VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
..+..+++|+++++|++|.++|.+..+.+.+.+ +.+++++ ++||... ++
T Consensus 113 ----------------------------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~-~~~H~~~-~~ 161 (176)
T 2qjw_A 113 ----------------------------PALDAAAVPISIVHAWHDELIPAADVIAWAQAR-SARLLLV-DDGHRLG-AH 161 (176)
T ss_dssp ----------------------------CCCCCCSSCEEEEEETTCSSSCHHHHHHHHHHH-TCEEEEE-SSCTTCT-TC
T ss_pred ----------------------------CcccccCCCEEEEEcCCCCccCHHHHHHHHHhC-CceEEEe-CCCcccc-cc
Confidence 004567899999999999999999999998887 7899999 8999984 88
Q ss_pred hHHHHHHHHHHHHh
Q psy4974 328 GQVFNEISRNFILE 341 (345)
Q Consensus 328 ~~~~~~~i~~fl~~ 341 (345)
++++.+.+.+||++
T Consensus 162 ~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 162 VQAASRAFAELLQS 175 (176)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999975
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=181.76 Aligned_cols=170 Identities=14% Similarity=0.087 Sum_probs=140.6
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCe---EEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLF---TSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~---~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
+|+|||+||++++. ..|..+++.|.+.|| +|+++|+|| +|.+. ..+.++.++++.
T Consensus 3 ~~~vv~~HG~~~~~-~~~~~~~~~l~~~G~~~~~v~~~d~~g-------------~g~s~--------~~~~~~~~~~~~ 60 (181)
T 1isp_A 3 HNPVVMVHGIGGAS-FNFAGIKSYLVSQGWSRDKLYAVDFWD-------------KTGTN--------YNNGPVLSRFVQ 60 (181)
T ss_dssp CCCEEEECCTTCCG-GGGHHHHHHHHHTTCCGGGEEECCCSC-------------TTCCH--------HHHHHHHHHHHH
T ss_pred CCeEEEECCcCCCH-hHHHHHHHHHHHcCCCCccEEEEecCC-------------CCCch--------hhhHHHHHHHHH
Confidence 46899999999995 999999999999998 699999999 98773 225677889999
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccC
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDND 247 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
++++.++.++++++||||||.+++.++.++ |++++++|++++....... ..
T Consensus 61 ~~~~~~~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~---------------------------~~ 113 (181)
T 1isp_A 61 KVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG---------------------------KA 113 (181)
T ss_dssp HHHHHHCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS---------------------------BC
T ss_pred HHHHHcCCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc---------------------------cc
Confidence 999999999999999999999999999988 8899999999987542110 00
Q ss_pred CchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 248 VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
+ .......++|+++++|++|.++|.+.. .+++.++++++++||+.+.++
T Consensus 114 ---~-----------------------~~~~~~~~~p~l~i~G~~D~~v~~~~~-----~~~~~~~~~~~~~gH~~~~~~ 162 (181)
T 1isp_A 114 ---L-----------------------PGTDPNQKILYTSIYSSADMIVMNYLS-----RLDGARNVQIHGVGHIGLLYS 162 (181)
T ss_dssp ---C-----------------------CCSCTTCCCEEEEEEETTCSSSCHHHH-----CCBTSEEEEESSCCTGGGGGC
T ss_pred ---C-----------------------CCCCCccCCcEEEEecCCCcccccccc-----cCCCCcceeeccCchHhhccC
Confidence 0 000112367999999999999998743 368899999999999999988
Q ss_pred hHHHHHHHHHHHHhhc
Q psy4974 328 GQVFNEISRNFILEEN 343 (345)
Q Consensus 328 ~~~~~~~i~~fl~~~~ 343 (345)
| ++.+.|.+||.+..
T Consensus 163 ~-~~~~~i~~fl~~~~ 177 (181)
T 1isp_A 163 S-QVNSLIKEGLNGGG 177 (181)
T ss_dssp H-HHHHHHHHHHTTTC
T ss_pred H-HHHHHHHHHHhccC
Confidence 6 79999999998764
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-24 Score=178.77 Aligned_cols=184 Identities=15% Similarity=0.117 Sum_probs=141.3
Q ss_pred cCceEEEEEcCC----CCceEEEEcCc-----CCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 80 KGCDIRFIKYGS----GAQVLFFTYGV-----LGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 80 ~g~~l~~~~~g~----~~p~vv~lHG~-----~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
+| .+++....+ ..|+||++||+ ... ...|..+++.|+++||.|+++|+|| +|.|..
T Consensus 15 ~g-~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~g-------------~g~s~~ 79 (208)
T 3trd_A 15 VG-QLEVMITRPKGIEKSVTGIICHPHPLHGGTMN-NKVVTTLAKALDELGLKTVRFNFRG-------------VGKSQG 79 (208)
T ss_dssp SS-EEEEEEECCSSCCCSEEEEEECSCGGGTCCTT-CHHHHHHHHHHHHTTCEEEEECCTT-------------STTCCS
T ss_pred Cc-eEEEEEEcCCCCCCCCEEEEEcCCCCCCCccC-CchHHHHHHHHHHCCCEEEEEecCC-------------CCCCCC
Confidence 66 887766542 34799999993 333 3678889999999999999999999 999975
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS 230 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 230 (345)
.... .....++..+.+..+.+..+.++++++|||+||.+++.++ .+| +++++|++++.....
T Consensus 80 ~~~~--~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~-------------- 141 (208)
T 3trd_A 80 RYDN--GVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYE-------------- 141 (208)
T ss_dssp CCCT--TTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSG--------------
T ss_pred Cccc--hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccC--------------
Confidence 5321 1112233333333444444667999999999999999999 666 899999999876100
Q ss_pred CCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC
Q psy4974 231 NWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF 310 (345)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~ 310 (345)
....+..+++|+++++|++|.++|.+..+.+.+.+++
T Consensus 142 -------------------------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~ 178 (208)
T 3trd_A 142 -------------------------------------------GFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISS 178 (208)
T ss_dssp -------------------------------------------GGTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSS
T ss_pred -------------------------------------------CchhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccC
Confidence 0123445689999999999999999999999998876
Q ss_pred -cEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 311 -CQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 311 -~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.++++++++||.+..+ .+++.+.|.+||.
T Consensus 179 ~~~~~~~~~~~H~~~~~-~~~~~~~i~~fl~ 208 (208)
T 3trd_A 179 PVEFVVMSGASHFFHGR-LIELRELLVRNLA 208 (208)
T ss_dssp CCEEEEETTCCSSCTTC-HHHHHHHHHHHHC
T ss_pred ceEEEEeCCCCCccccc-HHHHHHHHHHHhC
Confidence 8999999999998866 4889999999983
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.9e-26 Score=190.63 Aligned_cols=199 Identities=14% Similarity=0.081 Sum_probs=153.4
Q ss_pred eeeEEEcCceEEEEEcCC--CCceEEEEcCcCCCchh--hHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS--GAQVLFFTYGVLGEIRN--SFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~--~~p~vv~lHG~~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
...+..+|.++.+....+ ..|+||++||++++. . .|..+++.|+++||.|+++|+|| +|.|.
T Consensus 14 ~~~~~~~g~~l~~~~~~p~~~~p~vv~~hG~~~~~-~~~~~~~~~~~l~~~G~~v~~~d~~g-------------~g~s~ 79 (223)
T 2o2g_A 14 AVSVSVGEVKLKGNLVIPNGATGIVLFAHGSGSSR-YSPRNRYVAEVLQQAGLATLLIDLLT-------------QEEEE 79 (223)
T ss_dssp EEEEEETTEEEEEEEECCTTCCEEEEEECCTTCCT-TCHHHHHHHHHHHHHTCEEEEECSSC-------------HHHHH
T ss_pred EEEEecCCeEEEEEEecCCCCceEEEEecCCCCCC-CccchHHHHHHHHHCCCEEEEEcCCC-------------cCCCC
Confidence 344456888898776543 347999999999884 5 45678889998899999999999 88774
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHhCCc------cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHH
Q psy4974 150 PKGRSFVPFQYIEEDVDIAYELLKLLGVC------KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVF 223 (345)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 223 (345)
..........++++.++++.++++.+... +++++|||+||.+++.++..+|++++++|++++.....
T Consensus 80 ~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------- 152 (223)
T 2o2g_A 80 IDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA------- 152 (223)
T ss_dssp HHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC-------
T ss_pred ccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC-------
Confidence 33211000125667777777777766433 89999999999999999999999999999999853210
Q ss_pred HHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHH
Q psy4974 224 EGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQS 303 (345)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~ 303 (345)
...+.++++|+++++|++|.++|....+.
T Consensus 153 ---------------------------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 181 (223)
T 2o2g_A 153 ---------------------------------------------------PSALPHVKAPTLLIVGGYDLPVIAMNEDA 181 (223)
T ss_dssp ---------------------------------------------------TTTGGGCCSCEEEEEETTCHHHHHHHHHH
T ss_pred ---------------------------------------------------HHHHhcCCCCEEEEEccccCCCCHHHHHH
Confidence 12244568999999999999998777666
Q ss_pred HHhhcCCcEEEEeCCCCCcccc-cChHHHHHHHHHHHHhhcc
Q psy4974 304 LLNQLKFCQYYQFSSGGHSCHI-KHGQVFNEISRNFILEENK 344 (345)
Q Consensus 304 ~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~k 344 (345)
+.+..++.++++++++||.+.. +.++++.+.+.+||++..|
T Consensus 182 ~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 182 LEQLQTSKRLVIIPRASHLFEEPGALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp HHHCCSSEEEEEETTCCTTCCSTTHHHHHHHHHHHHHHHHCC
T ss_pred HHhhCCCeEEEEeCCCCcccCChHHHHHHHHHHHHHHHHhcC
Confidence 6666678999999999999766 4679999999999988653
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-25 Score=182.67 Aligned_cols=178 Identities=12% Similarity=0.065 Sum_probs=136.0
Q ss_pred CceEEEEcCcCCCc--hhhHHH-HHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEI--RNSFKK-QLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 93 ~p~vv~lHG~~~~~--~~~~~~-~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.|+|||+||++++. ...|.. +.+.|++. ||+|+++|+|| ++.. .. .+++
T Consensus 4 ~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g-------------~~~~-----------~~---~~~~ 56 (194)
T 2qs9_A 4 PSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPD-------------PITA-----------RE---SIWL 56 (194)
T ss_dssp CCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSS-------------TTTC-----------CH---HHHH
T ss_pred CCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCC-------------CCcc-----------cH---HHHH
Confidence 47999999999883 155766 78899887 89999999999 6311 22 5667
Q ss_pred HHHHHHhCC-ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccC
Q psy4974 169 YELLKLLGV-CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDND 247 (345)
Q Consensus 169 ~~~l~~~~~-~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
..+++.++. ++++|+||||||.+|+.+|.++| |+++|++++.......... ....++...
T Consensus 57 ~~~~~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~-----------------~~~~~~~~~ 117 (194)
T 2qs9_A 57 PFMETELHCDEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDENE-----------------RASGYFTRP 117 (194)
T ss_dssp HHHHHTSCCCTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHHH-----------------HHTSTTSSC
T ss_pred HHHHHHhCcCCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhhh-----------------HHHhhhccc
Confidence 777888888 89999999999999999999998 9999999987653211110 000011111
Q ss_pred CchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccC
Q psy4974 248 VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 327 (345)
. . ...+..+.+|+++++|++|.++|.+.++.+.+.+ ++++.+++++||+++.++
T Consensus 118 --~---~--------------------~~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~ 171 (194)
T 2qs9_A 118 --W---Q--------------------WEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL-ETKLHKFTDCGHFQNTEF 171 (194)
T ss_dssp --C---C--------------------HHHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH-TCEEEEESSCTTSCSSCC
T ss_pred --c---c--------------------HHHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-CCeEEEeCCCCCccchhC
Confidence 0 0 0011123569999999999999999999999988 899999999999999999
Q ss_pred hHHHHHHHHHHHHhhc
Q psy4974 328 GQVFNEISRNFILEEN 343 (345)
Q Consensus 328 ~~~~~~~i~~fl~~~~ 343 (345)
|+.+.+.+ +||++..
T Consensus 172 p~~~~~~~-~fl~~~~ 186 (194)
T 2qs9_A 172 HELITVVK-SLLKVPA 186 (194)
T ss_dssp HHHHHHHH-HHHTCCC
T ss_pred HHHHHHHH-HHHHhhh
Confidence 99998776 9998764
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-25 Score=190.42 Aligned_cols=180 Identities=12% Similarity=0.081 Sum_probs=144.3
Q ss_pred cCceEEEEEcC--CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 80 KGCDIRFIKYG--SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 80 ~g~~l~~~~~g--~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
++..++|...+ ...|+||++||++++. ..|..+++.|+++||.|+++|+|| +|.+...
T Consensus 39 ~~~~l~~p~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g-------------~g~~~~~------ 98 (262)
T 1jfr_A 39 GGGTIYYPTSTADGTFGAVVISPGFTAYQ-SSIAWLGPRLASQGFVVFTIDTNT-------------TLDQPDS------ 98 (262)
T ss_dssp CCEEEEEESCCTTCCEEEEEEECCTTCCG-GGTTTHHHHHHTTTCEEEEECCSS-------------TTCCHHH------
T ss_pred CceeEEecCCCCCCCCCEEEEeCCcCCCc-hhHHHHHHHHHhCCCEEEEeCCCC-------------CCCCCch------
Confidence 45678887663 2347999999999995 899999999999999999999999 8866211
Q ss_pred ccchHHHHHHHHHHHH-------HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc
Q psy4974 158 FQYIEEDVDIAYELLK-------LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS 230 (345)
Q Consensus 158 ~~~~~~~~~~~~~~l~-------~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 230 (345)
.. .....+.+.+. .++.++++++|||+||.+++.+|.++|+ ++++|++++...
T Consensus 99 --~~-~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~---------------- 158 (262)
T 1jfr_A 99 --RG-RQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT---------------- 158 (262)
T ss_dssp --HH-HHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS----------------
T ss_pred --hH-HHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc----------------
Confidence 11 12222223332 3455689999999999999999999987 999999987432
Q ss_pred CCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHH-HHHHHhhcC
Q psy4974 231 NWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ-VQSLLNQLK 309 (345)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~-~~~~~~~~~ 309 (345)
...+.++++|+|+++|++|.+++.+. .+.+.+.++
T Consensus 159 --------------------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~ 194 (262)
T 1jfr_A 159 --------------------------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLP 194 (262)
T ss_dssp --------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSC
T ss_pred --------------------------------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhh
Confidence 22355678999999999999999998 999998886
Q ss_pred C---cEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 310 F---CQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 310 ~---~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+ .++++++++||..+.++++++.+.+.+||++..
T Consensus 195 ~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l 231 (262)
T 1jfr_A 195 GSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFI 231 (262)
T ss_dssp TTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEeCCCCcCCcccchHHHHHHHHHHHHHHh
Confidence 4 489999999999999999999999999998754
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.5e-26 Score=185.41 Aligned_cols=183 Identities=13% Similarity=0.070 Sum_probs=138.5
Q ss_pred CCCceEEEEcCcCCCchh-hHHHHHH-hhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIRN-SFKKQLT-AFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~-~~~~~~~-~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
+++|+||++||++++. . .|...+. .|+++||+|+++|+|. .+.. +++++++++
T Consensus 2 ~g~p~vv~~HG~~~~~-~~~~~~~~~~~l~~~g~~v~~~d~~~-------------~~~~-----------~~~~~~~~~ 56 (192)
T 1uxo_A 2 RGTKQVYIIHGYRASS-TNHWFPWLKKRLLADGVQADILNMPN-------------PLQP-----------RLEDWLDTL 56 (192)
T ss_dssp --CCEEEEECCTTCCT-TSTTHHHHHHHHHHTTCEEEEECCSC-------------TTSC-----------CHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCc-chhHHHHHHHHHHhCCcEEEEecCCC-------------CCCC-----------CHHHHHHHH
Confidence 4556799999999995 6 7888774 6877789999999987 3211 467778888
Q ss_pred HHHHHHhCCccEEEEEeChhHHHHHHHHHhCCc--ccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHccc
Q psy4974 169 YELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH--MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDN 246 (345)
Q Consensus 169 ~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (345)
.++++.+ .++++++|||+||.+++.+|.++|+ +++++|++++......... . + ..+..
T Consensus 57 ~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~-------~-----------~-~~~~~ 116 (192)
T 1uxo_A 57 SLYQHTL-HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQ-------M-----------L-DEFTQ 116 (192)
T ss_dssp HTTGGGC-CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCG-------G-----------G-GGGTC
T ss_pred HHHHHhc-cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccch-------h-----------h-hhhhh
Confidence 8888887 7899999999999999999999999 9999999998755321100 0 0 00000
Q ss_pred CCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCccccc
Q psy4974 247 DVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIK 326 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 326 (345)
. ..+ ...+.++++|+++++|++|.++|.+.++.+.+.+ +.++++++++||+.+.+
T Consensus 117 ~-----------------------~~~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~ 171 (192)
T 1uxo_A 117 G-----------------------SFD-HQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI-DAALYEVQHGGHFLEDE 171 (192)
T ss_dssp S-----------------------CCC-HHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-TCEEEEETTCTTSCGGG
T ss_pred c-----------------------CCC-HHHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc-CceEEEeCCCcCccccc
Confidence 0 000 1122345679999999999999999999999998 99999999999999988
Q ss_pred ChHH---HHHHHHHHHHhhc
Q psy4974 327 HGQV---FNEISRNFILEEN 343 (345)
Q Consensus 327 ~~~~---~~~~i~~fl~~~~ 343 (345)
++++ +.+.+.+|+++..
T Consensus 172 ~~~~~~~~~~~l~~~l~~~~ 191 (192)
T 1uxo_A 172 GFTSLPIVYDVLTSYFSKET 191 (192)
T ss_dssp TCSCCHHHHHHHHHHHHC--
T ss_pred ccccHHHHHHHHHHHHHHhc
Confidence 8744 5778888887643
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-24 Score=181.88 Aligned_cols=192 Identities=12% Similarity=0.078 Sum_probs=146.3
Q ss_pred eeeEEEcCceEEEEEcC---CCCceEEEEcCcCC---C-chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYG---SGAQVLFFTYGVLG---E-IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYG 146 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g---~~~p~vv~lHG~~~---~-~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G 146 (345)
...+...+..+.+.... ++.|+||++||+++ + ....|..+++.|+++||.|+++|+|| +|
T Consensus 25 ~~~~~~~~g~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g-------------~G 91 (249)
T 2i3d_A 25 EVIFNGPAGRLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRS-------------IG 91 (249)
T ss_dssp EEEEEETTEEEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTT-------------ST
T ss_pred EEEEECCCceEEEEEEcCCCCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCC-------------CC
Confidence 44445544366654432 34578999999742 2 12456889999999999999999999 99
Q ss_pred CCCCCCCCCCCccchHHHHHHHHHHHHHh---CC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHH
Q psy4974 147 QSLPKGRSFVPFQYIEEDVDIAYELLKLL---GV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVR 221 (345)
Q Consensus 147 ~s~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 221 (345)
.|..... . ..... +++.++++.+ .. ++++++|||+||.+++.+|.++|+ ++++|++++......
T Consensus 92 ~s~~~~~-~----~~~~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~---- 160 (249)
T 2i3d_A 92 RSQGEFD-H----GAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD---- 160 (249)
T ss_dssp TCCSCCC-S----SHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC----
T ss_pred CCCCCCC-C----ccchH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh----
Confidence 9865432 1 22222 4444444443 22 379999999999999999999998 999999998754210
Q ss_pred HHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHH
Q psy4974 222 VFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQV 301 (345)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~ 301 (345)
...+..+++|+++++|++|.++|.+..
T Consensus 161 -----------------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~ 187 (249)
T 2i3d_A 161 -----------------------------------------------------FSFLAPCPSSGLIINGDADKVAPEKDV 187 (249)
T ss_dssp -----------------------------------------------------CTTCTTCCSCEEEEEETTCSSSCHHHH
T ss_pred -----------------------------------------------------hhhhcccCCCEEEEEcCCCCCCCHHHH
Confidence 123456789999999999999999999
Q ss_pred HHHHhhcC-----CcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 302 QSLLNQLK-----FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 302 ~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+.+.+.++ +.++++++++||... +.++++.+.+.+||++..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~i~~fl~~~l 233 (249)
T 2i3d_A 188 NGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDRRL 233 (249)
T ss_dssp HHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCceeEEEECCCCcccc-cCHHHHHHHHHHHHHHhc
Confidence 99998887 789999999999988 789999999999998754
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.5e-25 Score=195.44 Aligned_cols=195 Identities=15% Similarity=0.150 Sum_probs=150.0
Q ss_pred eEEEcCceEEEEEcCC-CCceEEEEcCcCCCchhhHH-------HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCC
Q psy4974 76 FFSIKGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFK-------KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQ 147 (345)
Q Consensus 76 ~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~-------~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~ 147 (345)
.+..+...+.|...++ .+++|||+||++.+. ..|. .+++.|.++||.|+++|+|| ||.
T Consensus 44 ~~~~~~~~~~~~~p~~~~~~~vvl~HG~g~~~-~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G-------------~G~ 109 (328)
T 1qlw_A 44 TVTVDQMYVRYQIPQRAKRYPITLIHGCCLTG-MTWETTPDGRMGWDEYFLRKGYSTYVIDQSG-------------RGR 109 (328)
T ss_dssp EEEESCEEEEEEEETTCCSSCEEEECCTTCCG-GGGSSCTTSCCCHHHHHHHTTCCEEEEECTT-------------STT
T ss_pred eEEeeeEEEEEEccCCCCCccEEEEeCCCCCC-CccccCCCCchHHHHHHHHCCCeEEEECCCC-------------ccc
Confidence 3344445555555443 457899999999885 8888 48889988899999999999 999
Q ss_pred CCCCCCCC----------------------------------C--------CccchHH------------------HHHH
Q psy4974 148 SLPKGRSF----------------------------------V--------PFQYIEE------------------DVDI 167 (345)
Q Consensus 148 s~~~~~~~----------------------------------~--------~~~~~~~------------------~~~~ 167 (345)
|....... . ....+++ .+++
T Consensus 110 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (328)
T 1qlw_A 110 SATDISAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVAN 189 (328)
T ss_dssp SCCCCHHHHHHHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHH
T ss_pred CCCCCcccccccccccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHH
Confidence 86543210 0 0000333 6777
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccC
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDND 247 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
+.++++.++ +++++|||+||.+++.+|.++|++|+++|+++|... ..
T Consensus 190 l~~l~~~~~--~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~-------------------------------~~ 236 (328)
T 1qlw_A 190 LSKLAIKLD--GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC-------------------------------PK 236 (328)
T ss_dssp HHHHHHHHT--SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC-------------------------------CC
T ss_pred HHHHHHHhC--CceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC-------------------------------CC
Confidence 788888876 899999999999999999999999999999998541 00
Q ss_pred CchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCCh-----HHHHHHHhhcC----CcEEEEeCC
Q psy4974 248 VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST-----QQVQSLLNQLK----FCQYYQFSS 318 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~-----~~~~~~~~~~~----~~~~~~~~~ 318 (345)
.......+++|+|+++|++|.++|. +.++.+.+.++ +++++++++
T Consensus 237 --------------------------~~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 290 (328)
T 1qlw_A 237 --------------------------PEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPA 290 (328)
T ss_dssp --------------------------GGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGG
T ss_pred --------------------------HHHHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCC
Confidence 0111122568999999999999996 88888888876 789999996
Q ss_pred CC-----CcccccC-hHHHHHHHHHHHHhhc
Q psy4974 319 GG-----HSCHIKH-GQVFNEISRNFILEEN 343 (345)
Q Consensus 319 ~g-----H~~~~~~-~~~~~~~i~~fl~~~~ 343 (345)
+| |+++.+. ++++.+.|.+||++..
T Consensus 291 ~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~ 321 (328)
T 1qlw_A 291 LGVHGNSHMMMQDRNNLQVADLILDWIGRNT 321 (328)
T ss_dssp GTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred CCcCCCcccchhccCHHHHHHHHHHHHHhcc
Confidence 65 9999988 9999999999998764
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-24 Score=183.75 Aligned_cols=240 Identities=11% Similarity=0.143 Sum_probs=154.3
Q ss_pred eeEEEcCceEEEEEcCC----CCceEEEEcCcC---CCchhhH-HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGS----GAQVLFFTYGVL---GEIRNSF-KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYG 146 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~----~~p~vv~lHG~~---~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G 146 (345)
.+...+|..+++..+.+ ..|+||++||++ ++. ..| ..+.+.|++. |.|+++|+|| +|
T Consensus 7 ~~~~~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~-~~~~~~~~~~l~~~-~~v~~~d~~~-------------~~ 71 (275)
T 3h04_A 7 KVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKA-NDLSPQYIDILTEH-YDLIQLSYRL-------------LP 71 (275)
T ss_dssp EEECTTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCCT-TCSCHHHHHHHTTT-EEEEEECCCC-------------TT
T ss_pred EEecCCcEEEEEEEEccCCCCCCCEEEEEECCcccCCch-hhhHHHHHHHHHhC-ceEEeecccc-------------CC
Confidence 33445888998877632 347899999988 553 544 4788889888 9999999999 87
Q ss_pred CCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHH-H
Q psy4974 147 QSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFE-G 225 (345)
Q Consensus 147 ~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~ 225 (345)
.+.. ....++..+.+..+.+.++.++++|+||||||.+|+.+|.+ ++++++|+++|............. .
T Consensus 72 ~~~~-------~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~ 142 (275)
T 3h04_A 72 EVSL-------DCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSY 142 (275)
T ss_dssp TSCH-------HHHHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHH
T ss_pred cccc-------chhHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccch
Confidence 6521 11334445555555666677899999999999999999998 789999999998765322211000 0
Q ss_pred hHhccC-CChhhHHHHHHHcccCCc----hhhhhHHH--HHHH---HHHHHHhhCc-----hhhhccCCCCCCCEEEEEe
Q psy4974 226 MRRLSN-WSPMARSEVLKAYDNDVN----YITGIFNQ--YVDM---VNLIFKSYGR-----NVYQELLPYVDVPVLVFHS 290 (345)
Q Consensus 226 ~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~---~~~~~~~~~~-----~~~~~~l~~i~~Pvl~i~G 290 (345)
...... .... ....+..... ........ .... +...+..... ......+..++ |+|+++|
T Consensus 143 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G 217 (275)
T 3h04_A 143 YAKIAQSINET----MIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHC 217 (275)
T ss_dssp HHHHHTTSCHH----HHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEE
T ss_pred hhcccccchHH----HHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEec
Confidence 000000 1111 1111100000 00000000 0000 0011100000 00112235666 9999999
Q ss_pred CCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccCh---HHHHHHHHHHHHhhc
Q psy4974 291 ADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHG---QVFNEISRNFILEEN 343 (345)
Q Consensus 291 ~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~~ 343 (345)
++|.++|.+.++.+.+.+++.++++++++||.++.+.+ +++.+.+.+||+++.
T Consensus 218 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l 273 (275)
T 3h04_A 218 NGDYDVPVEESEHIMNHVPHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAIT 273 (275)
T ss_dssp TTCSSSCTHHHHHHHTTCSSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHhcCCceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999888 699999999998764
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=180.32 Aligned_cols=178 Identities=14% Similarity=0.101 Sum_probs=137.4
Q ss_pred CCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEe-------------------CCCCchhhhccCCccCCCCCCCC
Q psy4974 90 GSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFW-------------------DPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 90 g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~-------------------D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
++..|+||++||++++. ..|..+++.|++.||.|+++ |++| + .+..
T Consensus 20 ~~~~~~vv~lHG~~~~~-~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g-------------~-~~~~ 84 (232)
T 1fj2_A 20 RKATAAVIFLHGLGDTG-HGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIG-------------L-SPDS 84 (232)
T ss_dssp SCCSEEEEEECCSSSCH-HHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCC-------------C-STTC
T ss_pred CCCCceEEEEecCCCcc-chHHHHHHHHhcCCcEEEecCCCcccccccccccccccccccc-------------C-Cccc
Confidence 34558999999999994 89999999999889999998 5555 5 2222
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHh---CC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHH
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLL---GV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEG 225 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~---~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 225 (345)
.. ...++++.++++.++++.+ +. ++++++|||+||.+|+.++.++|++++++|++++........
T Consensus 85 ~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~------ 154 (232)
T 1fj2_A 85 QE----DESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF------ 154 (232)
T ss_dssp CB----CHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS------
T ss_pred cc----ccHHHHHHHHHHHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccc------
Confidence 21 2336777788888888886 65 699999999999999999999999999999999865432100
Q ss_pred hHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHH
Q psy4974 226 MRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLL 305 (345)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~ 305 (345)
.. ....+..+++|+++++|++|.+++.+.++.+.
T Consensus 155 -------------------~~---------------------------~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~ 188 (232)
T 1fj2_A 155 -------------------PQ---------------------------GPIGGANRDISILQCHGDCDPLVPLMFGSLTV 188 (232)
T ss_dssp -------------------CS---------------------------SCCCSTTTTCCEEEEEETTCSSSCHHHHHHHH
T ss_pred -------------------cc---------------------------cccccccCCCCEEEEecCCCccCCHHHHHHHH
Confidence 00 02235667899999999999999998888777
Q ss_pred hhc------CCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 306 NQL------KFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 306 ~~~------~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+.+ ++.++++++++||..+.+.. +.+.+||++.
T Consensus 189 ~~l~~~~~~~~~~~~~~~~~~H~~~~~~~----~~i~~~l~~~ 227 (232)
T 1fj2_A 189 EKLKTLVNPANVTFKTYEGMMHSSCQQEM----MDVKQFIDKL 227 (232)
T ss_dssp HHHHHHSCGGGEEEEEETTCCSSCCHHHH----HHHHHHHHHH
T ss_pred HHHHHhCCCCceEEEEeCCCCcccCHHHH----HHHHHHHHHh
Confidence 766 45899999999999864444 5566666554
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-23 Score=187.11 Aligned_cols=227 Identities=12% Similarity=0.102 Sum_probs=137.1
Q ss_pred ceEEEEEcC---CCCceEEEEcCcCCCc--hhhHHHHHHhhCCCCeEEEEeC----CCCchhhhccCCccCCCCCCCCCC
Q psy4974 82 CDIRFIKYG---SGAQVLFFTYGVLGEI--RNSFKKQLTAFDPKLFTSIFWD----PPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 82 ~~l~~~~~g---~~~p~vv~lHG~~~~~--~~~~~~~~~~L~~~G~~vi~~D----~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
..++|...| +++|+|||+||++++. +..|..+++.| ..||+|+++| +|| ||.|+.+.
T Consensus 24 ~~~~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G-------------~G~S~~~~ 89 (335)
T 2q0x_A 24 PYCKIPVFMMNMDARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIG-------------SGPQDHAH 89 (335)
T ss_dssp TTEEEEEEEECTTSSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTT-------------SCSCCHHH
T ss_pred CceeEEEeccCCCCCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCC-------------CCCccccC
Confidence 778888665 3457999999998752 23468888999 5579999995 589 99983210
Q ss_pred CCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHH--hCCcccceeeEeccCCCCCchh--H----HHHH
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSM--KYPHMVHKLVIWGTKSFLTIDN--V----RVFE 224 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~--~~p~~v~~lvl~~~~~~~~~~~--~----~~~~ 224 (345)
...+..+.+..+.+.++.++++|+||||||.+|+.+|. .+|++|+++|++++........ . ....
T Consensus 90 -------~~~d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~~~ 162 (335)
T 2q0x_A 90 -------DAEDVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAARKE 162 (335)
T ss_dssp -------HHHHHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHHHHHHH
T ss_pred -------cHHHHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHHHHHHH
Confidence 12222222333344478899999999999999999999 5799999999999864322100 0 0000
Q ss_pred HhHhc---cCCChhhHHHHHHHcccCCchhhhhHHH------HHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCC
Q psy4974 225 GMRRL---SNWSPMARSEVLKAYDNDVNYITGIFNQ------YVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVM 295 (345)
Q Consensus 225 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~ 295 (345)
..... ........ ....+... .....+.. ....+.... .....+....+.++++|+|+|+|++|.+
T Consensus 163 ~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~PtLvi~G~~D~~ 237 (335)
T 2q0x_A 163 HVEKLMAEGRGEDSLA--MLKHYDIP--ITPARLAGGGFPTLQEAVWNPCI-RKEFDVLRRSVGVIKVPLLLMLAHNVQY 237 (335)
T ss_dssp HHHHHHHHTCTTCGGG--GTTTCSSC--CCHHHHHTCSCSSHHHHTHHHHH-TTCHHHHHHTGGGCCSCEEEEEECCTTC
T ss_pred HHHHHhhccCcccccc--chhhccCc--cCHHHHhhccCCCchhhhhhhhh-hhhhhHHHHHHhcCCCCeEEEEecCCCC
Confidence 00000 00000000 00000000 00000000 000000000 0011233556778999999999999999
Q ss_pred CChHH-----HHHHHhhcCCcE--------E-----EEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 296 VSTQQ-----VQSLLNQLKFCQ--------Y-----YQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 296 v~~~~-----~~~~~~~~~~~~--------~-----~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+|... .+.+.+.+++.+ + ++++++|| ++++.|.+||++.
T Consensus 238 vp~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~agH--------e~~~~i~~FL~~~ 294 (335)
T 2q0x_A 238 KPSDEEVGTVLEGVRDHTGCNRVTVSYFNDTCDELRRVLKAAES--------EHVAAILQFLADE 294 (335)
T ss_dssp CCCHHHHHHHHHHHHHHSSSSCEEEEECCCEECTTSCEEECCHH--------HHHHHHHHHHHHH
T ss_pred CChhhhHHHHHHHHHHhcCccccccccccchhhhhhcccCCCCC--------HHHHHHHHHHHhh
Confidence 99753 567777888876 6 78999999 3488899998753
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-23 Score=190.47 Aligned_cols=228 Identities=12% Similarity=0.104 Sum_probs=160.8
Q ss_pred eeeeEEEcCceEEEEEcCC----CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCC
Q psy4974 73 TEGFFSIKGCDIRFIKYGS----GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS 148 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s 148 (345)
+...+..+|..|.+....+ ..|+||++||++++. ..|......|.++||.|+++|+|| +|.+
T Consensus 128 ~~v~~~~dg~~i~~~l~~p~~~~~~P~vl~~hG~~~~~-~~~~~~~~~l~~~G~~v~~~d~rG-------------~G~s 193 (386)
T 2jbw_A 128 ERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTK-EESFQMENLVLDRGMATATFDGPG-------------QGEM 193 (386)
T ss_dssp EEEEEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCT-TTTHHHHHHHHHTTCEEEEECCTT-------------SGGG
T ss_pred EEEEEEeCCEEEEEEEEcCCCCCCCCEEEEeCCCCccH-HHHHHHHHHHHhCCCEEEEECCCC-------------CCCC
Confidence 3445556898888765532 237899999998884 655556888888899999999999 9988
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHH---hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHH
Q psy4974 149 LPKGRSFVPFQYIEEDVDIAYELLKL---LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEG 225 (345)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 225 (345)
..... ...++.+++.++.+++.. ++.++++|+|||+||.+++.+|.+ |++++++|++ +.........
T Consensus 194 ~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~----- 263 (386)
T 2jbw_A 194 FEYKR---IAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWD----- 263 (386)
T ss_dssp TTTCC---SCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGG-----
T ss_pred CCCCC---CCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHH-----
Confidence 22111 223677778888888888 555799999999999999999998 8899999999 7654332211
Q ss_pred hHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHH
Q psy4974 226 MRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLL 305 (345)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~ 305 (345)
.............+... .. .... ...+... .....+.++++|+|+++|++|. ++.+.++.+.
T Consensus 264 -----~~~~~~~~~~~~~~g~~--~~----~~~~---~~~~~~~---~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~ 325 (386)
T 2jbw_A 264 -----LETPLTKESWKYVSKVD--TL----EEAR---LHVHAAL---ETRDVLSQIACPTYILHGVHDE-VPLSFVDTVL 325 (386)
T ss_dssp -----GSCHHHHHHHHHHTTCS--SH----HHHH---HHHHHHT---CCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHH
T ss_pred -----hccHHHHHHHHHHhCCC--CH----HHHH---HHHHHhC---ChhhhhcccCCCEEEEECCCCC-CCHHHHHHHH
Confidence 11111111111122211 00 0111 0111111 2234456788999999999999 9999999999
Q ss_pred hhc-C-CcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 306 NQL-K-FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 306 ~~~-~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+.+ + +.++++++++||.. .++++++.+.|.+||++..
T Consensus 326 ~~l~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~l 364 (386)
T 2jbw_A 326 ELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDVL 364 (386)
T ss_dssp HHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHHH
T ss_pred HHhcCCCcEEEEeCCCCcCC-ccchHHHHHHHHHHHHHhc
Confidence 998 7 78999999999965 5789999999999998764
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.7e-24 Score=179.21 Aligned_cols=192 Identities=17% Similarity=0.165 Sum_probs=151.2
Q ss_pred EcCceEEEEEcCC---CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC-
Q psy4974 79 IKGCDIRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS- 154 (345)
Q Consensus 79 ~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~- 154 (345)
.+|..+.+....+ ..|+||++||++++. ..|..+++.|+++||.|+++|+|| +|.|......
T Consensus 11 ~~g~~l~~~~~~p~~~~~p~vv~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g-------------~g~s~~~~~~~ 76 (236)
T 1zi8_A 11 YDGHTFGALVGSPAKAPAPVIVIAQDIFGVN-AFMRETVSWLVDQGYAAVCPDLYA-------------RQAPGTALDPQ 76 (236)
T ss_dssp TTSCEECEEEECCSSCSEEEEEEECCTTBSC-HHHHHHHHHHHHTTCEEEEECGGG-------------GTSTTCBCCTT
T ss_pred CCCCeEEEEEECCCCCCCCEEEEEcCCCCCC-HHHHHHHHHHHhCCcEEEeccccc-------------cCCCccccccc
Confidence 4777777665543 237899999999995 899999999999899999999999 9887532110
Q ss_pred -----------CCCccchHHHHHHHHHHHHHhC-----CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch
Q psy4974 155 -----------FVPFQYIEEDVDIAYELLKLLG-----VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID 218 (345)
Q Consensus 155 -----------~~~~~~~~~~~~~~~~~l~~~~-----~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 218 (345)
. ...+....++++.++++.+. .++++++|||+||.+|+.+|..+| +++++++.+....
T Consensus 77 ~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~--- 150 (236)
T 1zi8_A 77 DERQREQAYKLW-QAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE--- 150 (236)
T ss_dssp CHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG---
T ss_pred chhhhhhhhhhh-hccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc---
Confidence 0 11245666788888888875 468999999999999999999998 8999988774321
Q ss_pred hHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCCh
Q psy4974 219 NVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST 298 (345)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~ 298 (345)
+....+.++++|+++++|++|.++|.
T Consensus 151 ------------------------------------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~ 176 (236)
T 1zi8_A 151 ------------------------------------------------------KQLNKVPEVKHPALFHMGGQDHFVPA 176 (236)
T ss_dssp ------------------------------------------------------GCGGGGGGCCSCEEEEEETTCTTSCH
T ss_pred ------------------------------------------------------cchhhhhhcCCCEEEEecCCCCCCCH
Confidence 01233456789999999999999999
Q ss_pred HHHHHHHhhc---CCcEEEEeCCCCCcccccCh--------HHHHHHHHHHHHhhcc
Q psy4974 299 QQVQSLLNQL---KFCQYYQFSSGGHSCHIKHG--------QVFNEISRNFILEENK 344 (345)
Q Consensus 299 ~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~--------~~~~~~i~~fl~~~~k 344 (345)
+..+.+.+.+ ++.++++++++||.+..+.+ +++.+.+.+||++..+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 233 (236)
T 1zi8_A 177 PSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQS 233 (236)
T ss_dssp HHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcC
Confidence 9999998887 57899999999998876644 5788999999988754
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.7e-24 Score=194.94 Aligned_cols=243 Identities=14% Similarity=0.072 Sum_probs=153.8
Q ss_pred eeeEEEcCceEEEE--EcCCCC-ceEEEEcCcCCCchhhHHHHHH-hhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFI--KYGSGA-QVLFFTYGVLGEIRNSFKKQLT-AFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 74 ~~~~~~~g~~l~~~--~~g~~~-p~vv~lHG~~~~~~~~~~~~~~-~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
...+..+|..+... ..++++ |+||++||++++. ..|..... .+.+.||.|+++|+|| +|.|.
T Consensus 137 ~~~i~~~~~~l~~~~~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~~~~~~g~~vi~~D~~G-------------~G~s~ 202 (405)
T 3fnb_A 137 SIEVPFEGELLPGYAIISEDKAQDTLIVVGGGDTSR-EDLFYMLGYSGWEHDYNVLMVDLPG-------------QGKNP 202 (405)
T ss_dssp EEEEEETTEEEEEEEECCSSSCCCEEEEECCSSCCH-HHHHHHTHHHHHHTTCEEEEECCTT-------------STTGG
T ss_pred EEEEeECCeEEEEEEEcCCCCCCCEEEEECCCCCCH-HHHHHHHHHHHHhCCcEEEEEcCCC-------------CcCCC
Confidence 44555677777633 334444 8999999998884 77766543 4556789999999999 99986
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhH
Q psy4974 150 PKGRSFVPFQYIEEDVDIAYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMR 227 (345)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 227 (345)
.....+ .. +..+++.++++.+.. ++++|+|||+||.+++.+|..+| +|+++|+++|...............
T Consensus 203 ~~~~~~-~~----~~~~d~~~~~~~l~~~~~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~~- 275 (405)
T 3fnb_A 203 NQGLHF-EV----DARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFSTA- 275 (405)
T ss_dssp GGTCCC-CS----CTHHHHHHHHHHCCCSSSCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC---
T ss_pred CCCCCC-Cc----cHHHHHHHHHHHHHhcCCCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhhh-
Confidence 443333 22 236666777777765 79999999999999999999998 8999999998765422111111000
Q ss_pred hccCCChhhHHHHHHHcccCCchhhhhHHHH---------HHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCCh
Q psy4974 228 RLSNWSPMARSEVLKAYDNDVNYITGIFNQY---------VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST 298 (345)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~ 298 (345)
.........................+... ...+....... ....+.++++|+|+++|++|.++|.
T Consensus 276 --~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~i~~PvLii~G~~D~~v~~ 349 (405)
T 3fnb_A 276 --LKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQA----QIVDYNKIDVPSLFLVGAGEDSELM 349 (405)
T ss_dssp ------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHC----CCCCGGGCCSCEEEEEETTSCHHHH
T ss_pred --hhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhh----cccCHhhCCCCEEEEecCCCcCCCh
Confidence 00000000001000000000000000000 00111111111 1122567899999999999999999
Q ss_pred HHHHHHHhhcC----CcEEEEe---CCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 299 QQVQSLLNQLK----FCQYYQF---SSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 299 ~~~~~~~~~~~----~~~~~~~---~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+.++.+.+.++ +.+++++ +++||..+.++++.+.+.|.+||++..
T Consensus 350 ~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l 401 (405)
T 3fnb_A 350 RQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIF 401 (405)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHh
Confidence 99999888874 4679999 667788888999999999999998764
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.5e-25 Score=178.72 Aligned_cols=180 Identities=13% Similarity=0.063 Sum_probs=141.6
Q ss_pred CceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccc
Q psy4974 81 GCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQY 160 (345)
Q Consensus 81 g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~ 160 (345)
|..++|...+++ |+|||+||++++....|......+... ++.+|+|| ++. + +
T Consensus 6 g~~l~~~~~g~~-~~vv~~HG~~~~~~~~~~~~~~~~~~~---~~~v~~~~-------------~~~-------~----~ 57 (191)
T 3bdv_A 6 EIDLRLTEVSQQ-LTMVLVPGLRDSDDEHWQSHWERRFPH---WQRIRQRE-------------WYQ-------A----D 57 (191)
T ss_dssp HHHHHHHHHHTT-CEEEEECCTTCCCTTSHHHHHHHHCTT---SEECCCSC-------------CSS-------C----C
T ss_pred cCccccCCCCCC-ceEEEECCCCCCchhhHHHHHHHhcCC---eEEEeccC-------------CCC-------c----C
Confidence 344555545544 699999999988546787777654443 35678888 742 2 5
Q ss_pred hHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHH
Q psy4974 161 IEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEV 240 (345)
Q Consensus 161 ~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
+.++++++.++++.++ ++++++|||+||.+|+.+|.++|++++++|++++....... +
T Consensus 58 ~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~-------------~-------- 115 (191)
T 3bdv_A 58 LDRWVLAIRRELSVCT-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFE-------------I-------- 115 (191)
T ss_dssp HHHHHHHHHHHHHTCS-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGT-------------C--------
T ss_pred HHHHHHHHHHHHHhcC-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCcccccc-------------C--------
Confidence 7788999999999887 89999999999999999999999999999999987553210 0
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCC
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGG 320 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~g 320 (345)
.. ...+.++++|+++++|++|.++|.+..+.+.+.+ ++++++++++|
T Consensus 116 -----~~---------------------------~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~g 162 (191)
T 3bdv_A 116 -----DD---------------------------RIQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-DSELVDVGEAG 162 (191)
T ss_dssp -----TT---------------------------TSCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH-TCEEEECCSCT
T ss_pred -----cc---------------------------ccccccCCCCEEEEecCCCCcCCHHHHHHHHHhc-CCcEEEeCCCC
Confidence 00 0345678999999999999999999999998887 89999999999
Q ss_pred Ccccc----cChHHHHHHHHHHHHhhcc
Q psy4974 321 HSCHI----KHGQVFNEISRNFILEENK 344 (345)
Q Consensus 321 H~~~~----~~~~~~~~~i~~fl~~~~k 344 (345)
|+.+. +.|+.+ +.|.+||++..+
T Consensus 163 H~~~~~~~~~~~~~~-~~i~~fl~~~~~ 189 (191)
T 3bdv_A 163 HINAEAGFGPWEYGL-KRLAEFSEILIP 189 (191)
T ss_dssp TSSGGGTCSSCHHHH-HHHHHHHHTTCS
T ss_pred cccccccchhHHHHH-HHHHHHHHHhcc
Confidence 99988 445555 999999987644
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.8e-24 Score=186.16 Aligned_cols=178 Identities=12% Similarity=0.144 Sum_probs=142.4
Q ss_pred ceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccch
Q psy4974 82 CDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYI 161 (345)
Q Consensus 82 ~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~ 161 (345)
..+++...+++.|+||++||++++. ..|..+++.|+++||.|+++|+|| +|.+... ..
T Consensus 85 ~~~~~p~~~~~~p~vv~~HG~~~~~-~~~~~~~~~la~~G~~vv~~d~~g-------------~g~s~~~--------~~ 142 (306)
T 3vis_A 85 GTIYYPRENNTYGAIAISPGYTGTQ-SSIAWLGERIASHGFVVIAIDTNT-------------TLDQPDS--------RA 142 (306)
T ss_dssp EEEEEESSCSCEEEEEEECCTTCCH-HHHHHHHHHHHTTTEEEEEECCSS-------------TTCCHHH--------HH
T ss_pred eEEEeeCCCCCCCEEEEeCCCcCCH-HHHHHHHHHHHhCCCEEEEecCCC-------------CCCCcch--------HH
Confidence 4455555555557899999999994 899999999999999999999999 9887321 11
Q ss_pred HHHHHHHHHHHHH---------hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCC
Q psy4974 162 EEDVDIAYELLKL---------LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNW 232 (345)
Q Consensus 162 ~~~~~~~~~~l~~---------~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 232 (345)
. .+..+.+++.. ++.++++++|||+||.+++.+|..+|+ ++++|++++...
T Consensus 143 ~-d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~------------------ 202 (306)
T 3vis_A 143 R-QLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL------------------ 202 (306)
T ss_dssp H-HHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS------------------
T ss_pred H-HHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC------------------
Confidence 1 22222222222 244689999999999999999999987 999999988543
Q ss_pred ChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH-HHHHHHhhcCC-
Q psy4974 233 SPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ-QVQSLLNQLKF- 310 (345)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~-~~~~~~~~~~~- 310 (345)
...+.++++|+++++|++|.++|.+ ..+.+.+.+++
T Consensus 203 ------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~ 240 (306)
T 3vis_A 203 ------------------------------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSP 240 (306)
T ss_dssp ------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTT
T ss_pred ------------------------------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccC
Confidence 1235567899999999999999988 58899888864
Q ss_pred --cEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 311 --CQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 311 --~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
.++++++++||..+.+.++++.+.+.+||++..
T Consensus 241 ~~~~~~~~~g~gH~~~~~~~~~~~~~i~~fl~~~l 275 (306)
T 3vis_A 241 TDKAYLELDGASHFAPNITNKTIGMYSVAWLKRFV 275 (306)
T ss_dssp SCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCccchhhchhHHHHHHHHHHHHHc
Confidence 579999999999999999999999999998754
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.1e-25 Score=183.13 Aligned_cols=190 Identities=13% Similarity=0.129 Sum_probs=144.1
Q ss_pred eeeEEEcCceEEEEEcCC--CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEe--CCCCchhhhccCCccCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS--GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFW--DPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~--~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~--D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
+.+++.+|..++|...++ +.|+||++||++++. ..|..+++.|++ ||.|+++ |++| +|.+.
T Consensus 17 e~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~l~~-g~~v~~~~~d~~g-------------~g~s~ 81 (226)
T 2h1i_A 17 NLYFQSNAMMKHVFQKGKDTSKPVLLLLHGTGGNE-LDLLPLAEIVDS-EASVLSVRGNVLE-------------NGMPR 81 (226)
T ss_dssp CHHHHHHSSSCEEEECCSCTTSCEEEEECCTTCCT-TTTHHHHHHHHT-TSCEEEECCSEEE-------------TTEEE
T ss_pred eeeecCCCceeEEecCCCCCCCcEEEEEecCCCCh-hHHHHHHHHhcc-CceEEEecCcccC-------------Ccchh
Confidence 556677899999999886 568999999999995 899999999988 7999999 8999 88764
Q ss_pred CC----CCCCCCccchHHHHHHHHHHH----HHh--CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh
Q psy4974 150 PK----GRSFVPFQYIEEDVDIAYELL----KLL--GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN 219 (345)
Q Consensus 150 ~~----~~~~~~~~~~~~~~~~~~~~l----~~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 219 (345)
.. ...+ +...+.+.++++.+++ +.. +.++++++|||+||.+|+.+|..+|++++++|+++|......
T Consensus 82 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~-- 158 (226)
T 2h1i_A 82 FFRRLAEGIF-DEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG-- 158 (226)
T ss_dssp SSCEEETTEE-CHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS--
T ss_pred hccccCccCc-ChhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc--
Confidence 22 1222 3333444444444444 444 447999999999999999999999999999999999754321
Q ss_pred HHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH
Q psy4974 220 VRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ 299 (345)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~ 299 (345)
......+++|+++++|++|.+++.+
T Consensus 159 -------------------------------------------------------~~~~~~~~~p~l~~~G~~D~~~~~~ 183 (226)
T 2h1i_A 159 -------------------------------------------------------MQLANLAGKSVFIAAGTNDPICSSA 183 (226)
T ss_dssp -------------------------------------------------------CCCCCCTTCEEEEEEESSCSSSCHH
T ss_pred -------------------------------------------------------cccccccCCcEEEEeCCCCCcCCHH
Confidence 0112235789999999999999999
Q ss_pred HHHHHHhhcC----CcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 300 QVQSLLNQLK----FCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 300 ~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
..+.+.+.++ +.++ +++++||....+. .+.+.+||.+
T Consensus 184 ~~~~~~~~l~~~~~~~~~-~~~~~gH~~~~~~----~~~~~~~l~~ 224 (226)
T 2h1i_A 184 ESEELKVLLENANANVTM-HWENRGHQLTMGE----VEKAKEWYDK 224 (226)
T ss_dssp HHHHHHHHHHTTTCEEEE-EEESSTTSCCHHH----HHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEE-EeCCCCCCCCHHH----HHHHHHHHHH
Confidence 8899888875 3455 8999999986444 4556666654
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-22 Score=167.78 Aligned_cols=171 Identities=12% Similarity=0.007 Sum_probs=133.6
Q ss_pred CceEEEEcCcC---CC-chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 93 AQVLFFTYGVL---GE-IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 93 ~p~vv~lHG~~---~~-~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.|+||++||++ ++ ....|..+++.|+++||.|+++|+|| +|.|..... . . ...++++
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g-------------~g~s~~~~~-~-~----~~~~~d~ 97 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRS-------------VGTSAGSFD-H-G----DGEQDDL 97 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTT-------------STTCCSCCC-T-T----THHHHHH
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCC-------------CCCCCCCcc-c-C----chhHHHH
Confidence 57999999953 22 13567889999999999999999999 999865432 1 1 2223333
Q ss_pred HHHHH----HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHc
Q psy4974 169 YELLK----LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAY 244 (345)
Q Consensus 169 ~~~l~----~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
.++++ ..+.++++++|||+||.+++.++.++ +++++|++++...... +
T Consensus 98 ~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~--------------------------~ 149 (220)
T 2fuk_A 98 RAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD--------------------------F 149 (220)
T ss_dssp HHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC--------------------------C
T ss_pred HHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh--------------------------h
Confidence 33333 33456999999999999999999887 7999999999765321 0
Q ss_pred ccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc-CCcEEEEeCCCCCcc
Q psy4974 245 DNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL-KFCQYYQFSSGGHSC 323 (345)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~~~gH~~ 323 (345)
..+. ..+|+++++|++|.++|.+..+.+.+.+ ++.++++++++||.+
T Consensus 150 -------------------------------~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 197 (220)
T 2fuk_A 150 -------------------------------SDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFF 197 (220)
T ss_dssp -------------------------------TTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTC
T ss_pred -------------------------------hhcc-cCCcEEEEECCCCcccCHHHHHHHHHHhCcCCcEEEeCCCCcee
Confidence 0011 2579999999999999999999999998 789999999999998
Q ss_pred cccChHHHHHHHHHHHHhhc
Q psy4974 324 HIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 324 ~~~~~~~~~~~i~~fl~~~~ 343 (345)
.. +++++.+.+.+||.+..
T Consensus 198 ~~-~~~~~~~~i~~~l~~~l 216 (220)
T 2fuk_A 198 HR-KLIDLRGALQHGVRRWL 216 (220)
T ss_dssp TT-CHHHHHHHHHHHHGGGC
T ss_pred hh-hHHHHHHHHHHHHHHHh
Confidence 87 58899999999998754
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.1e-23 Score=183.96 Aligned_cols=229 Identities=18% Similarity=0.125 Sum_probs=149.5
Q ss_pred EEcCceEEEEEc---C-CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 78 SIKGCDIRFIKY---G-SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 78 ~~~g~~l~~~~~---g-~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
..+|..+++... + ...|+||++||++++. ..|..+... .+.||.|+++|+|| +|.|..+..
T Consensus 89 ~~~g~~l~~~~~~P~~~~~~p~vv~~HG~g~~~-~~~~~~~~~-~~~G~~v~~~D~rG-------------~g~s~~~~~ 153 (346)
T 3fcy_A 89 GVRGARIHAKYIKPKTEGKHPALIRFHGYSSNS-GDWNDKLNY-VAAGFTVVAMDVRG-------------QGGQSQDVG 153 (346)
T ss_dssp CGGGCEEEEEEEEESCSSCEEEEEEECCTTCCS-CCSGGGHHH-HTTTCEEEEECCTT-------------SSSSCCCCC
T ss_pred cCCCCEEEEEEEecCCCCCcCEEEEECCCCCCC-CChhhhhHH-HhCCcEEEEEcCCC-------------CCCCCCCCc
Confidence 347888887754 2 2347999999999985 788777644 46689999999999 998865432
Q ss_pred CCC----------------CccchHHHHHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEecc
Q psy4974 154 SFV----------------PFQYIEEDVDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGT 211 (345)
Q Consensus 154 ~~~----------------~~~~~~~~~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 211 (345)
.+. ....+....+|+.+.++.+ +.++++++|||+||.+|+.+|..+|+ |+++|+++|
T Consensus 154 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p 232 (346)
T 3fcy_A 154 GVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYP 232 (346)
T ss_dssp CCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESC
T ss_pred ccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCC
Confidence 110 1112334445555444443 23589999999999999999999997 999999988
Q ss_pred CCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeC
Q psy4974 212 KSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSA 291 (345)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~ 291 (345)
...... ... ..... ......+..++.... ..... ....+......+....+.++++|+|+++|+
T Consensus 233 ~~~~~~---~~~----~~~~~-~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~d~~~~~~~i~~P~lii~G~ 296 (346)
T 3fcy_A 233 FLSDYK---RVW----DLDLA-KNAYQEITDYFRLFD-PRHER-------ENEVFTKLGYIDVKNLAKRIKGDVLMCVGL 296 (346)
T ss_dssp SSCCHH---HHH----HTTCC-CGGGHHHHHHHHHHC-TTCTT-------HHHHHHHHGGGCHHHHGGGCCSEEEEEEET
T ss_pred cccCHH---HHh----hcccc-ccchHHHHHHHHhcC-CCcch-------HHHHHHHhCcccHHHHHHhcCCCEEEEeeC
Confidence 643210 000 00000 000011111111000 00000 011111222233345567789999999999
Q ss_pred CCCCCChHHHHHHHhhcC-CcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 292 DDVMVSTQQVQSLLNQLK-FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 292 ~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+|.++|.+.+..+.+.++ ++++++++++||..+ +++.+.+.+||++.
T Consensus 297 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 297 MDQVCPPSTVFAAYNNIQSKKDIKVYPDYGHEPM----RGFGDLAMQFMLEL 344 (346)
T ss_dssp TCSSSCHHHHHHHHTTCCSSEEEEEETTCCSSCC----TTHHHHHHHHHHTT
T ss_pred CCCcCCHHHHHHHHHhcCCCcEEEEeCCCCCcCH----HHHHHHHHHHHHHh
Confidence 999999999999999987 689999999999987 67788999999875
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.9e-24 Score=181.63 Aligned_cols=218 Identities=11% Similarity=0.081 Sum_probs=144.8
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
+.++|||+||++++. ..|..+++ |.+ +|+|+++|+|| ++.+.... + +++++++++.++
T Consensus 20 ~~~~lv~lhg~~~~~-~~~~~~~~-l~~-~~~v~~~d~~G-------------~~~~~~~~--~----~~~~~~~~~~~~ 77 (265)
T 3ils_A 20 ARKTLFMLPDGGGSA-FSYASLPR-LKS-DTAVVGLNCPY-------------ARDPENMN--C----THGAMIESFCNE 77 (265)
T ss_dssp SSEEEEEECCTTCCG-GGGTTSCC-CSS-SEEEEEEECTT-------------TTCGGGCC--C----CHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCH-HHHHHHHh-cCC-CCEEEEEECCC-------------CCCCCCCC--C----CHHHHHHHHHHH
Confidence 347999999999995 99999988 855 59999999999 87664332 2 678889999999
Q ss_pred HHHhC-CccEEEEEeChhHHHHHHHHH---hCCcccceeeEeccCCCCCchh--HHHHHHhHhccCCChhhHHHHHHHcc
Q psy4974 172 LKLLG-VCKVSLFGWCDGGHLSFVFSM---KYPHMVHKLVIWGTKSFLTIDN--VRVFEGMRRLSNWSPMARSEVLKAYD 245 (345)
Q Consensus 172 l~~~~-~~~i~lvGhS~Gg~ia~~~a~---~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
++.+. ..+++|+||||||.+|+.+|. .+|+++.++|++++........ ......+..+......... ....
T Consensus 78 i~~~~~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 154 (265)
T 3ils_A 78 IRRRQPRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGA---SPDG 154 (265)
T ss_dssp HHHHCSSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSS---CSSS
T ss_pred HHHhCCCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCCccc---cccC
Confidence 99985 459999999999999999998 6677899999998765432111 0011111111000000000 0000
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEE-EEEeCC---CCCC--------------ChHHHHHHHhh
Q psy4974 246 NDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVL-VFHSAD---DVMV--------------STQQVQSLLNQ 307 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl-~i~G~~---D~~v--------------~~~~~~~~~~~ 307 (345)
.. ..... ....+...+.....+. ......+++|++ +++|++ |..+ +......+.+.
T Consensus 155 ~~--~~~~~---~~~~~~~~~~~~~~~~-~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 228 (265)
T 3ils_A 155 ST--EPPSY---LIPHFTAVVDVMLDYK-LAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTI 228 (265)
T ss_dssp CS--CCCTT---HHHHHHHHHHHTTTCC-CCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHH
T ss_pred CH--HHHHH---HHHHHHHHHHHHHhcC-CCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHh
Confidence 00 01111 1222222332222222 122457899988 999999 9887 33444555555
Q ss_pred cC--CcEEEEeCCCCCccc--ccChHHHHHHHHHHHH
Q psy4974 308 LK--FCQYYQFSSGGHSCH--IKHGQVFNEISRNFIL 340 (345)
Q Consensus 308 ~~--~~~~~~~~~~gH~~~--~~~~~~~~~~i~~fl~ 340 (345)
.+ +.++++++++||+.+ .++|+++++.|.+||.
T Consensus 229 ~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL~ 265 (265)
T 3ils_A 229 MPGASFDIVRADGANHFTLMQKEHVSIISDLIDRVMA 265 (265)
T ss_dssp STTCCEEEEEEEEEETTGGGSTTTTHHHHHHHHHHTC
T ss_pred CCccceeEEEcCCCCcceeeChhhHHHHHHHHHHHhC
Confidence 55 789999999999999 8999999999999973
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=174.51 Aligned_cols=189 Identities=13% Similarity=0.171 Sum_probs=139.1
Q ss_pred CCCCceEEEEcCcCCCchhhHHHHHHhhCC--CCeEEEEeCCCCchhhhccCC------ccCCCCCCCCCCCCCCCccch
Q psy4974 90 GSGAQVLFFTYGVLGEIRNSFKKQLTAFDP--KLFTSIFWDPPGNVVLYLLGK------TCSGYGQSLPKGRSFVPFQYI 161 (345)
Q Consensus 90 g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~--~G~~vi~~D~~G~~~~~~~g~------~~~~~G~s~~~~~~~~~~~~~ 161 (345)
++..|+||++||++++. ..|..+++.|++ .||.|+++|+||.......|. ...++|.+... ....+
T Consensus 11 ~~~~~~vv~~HG~~~~~-~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~-----~~~~~ 84 (218)
T 1auo_A 11 KPADACVIWLHGLGADR-YDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSI-----SLEEL 84 (218)
T ss_dssp SCCSEEEEEECCTTCCT-TTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEE-----CHHHH
T ss_pred CCCCcEEEEEecCCCCh-hhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccccc-----chHHH
Confidence 34558999999999995 899999999987 899999999885211111111 11124433211 23356
Q ss_pred HHHHHHHHHHHHHh---CCc--cEEEEEeChhHHHHHHHHH-hCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChh
Q psy4974 162 EEDVDIAYELLKLL---GVC--KVSLFGWCDGGHLSFVFSM-KYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPM 235 (345)
Q Consensus 162 ~~~~~~~~~~l~~~---~~~--~i~lvGhS~Gg~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (345)
++.++++.++++.+ +.+ +++++|||+||.+|+.+|. ++|++++++|++++..... .+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~--------------~~--- 147 (218)
T 1auo_A 85 EVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF--------------GD--- 147 (218)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC--------------CT---
T ss_pred HHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCc--------------hh---
Confidence 77788888888876 544 9999999999999999999 9999999999999875530 00
Q ss_pred hHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----Cc
Q psy4974 236 ARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FC 311 (345)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~ 311 (345)
... + ....+++|+++++|++|.++|.+..+.+.+.++ +.
T Consensus 148 ---------~~~---~-------------------------~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~ 190 (218)
T 1auo_A 148 ---------ELE---L-------------------------SASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTV 190 (218)
T ss_dssp ---------TCC---C-------------------------CHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCE
T ss_pred ---------hhh---h-------------------------hhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCce
Confidence 000 0 002357899999999999999999999988886 48
Q ss_pred EEEEeCCCCCcccccChHHHHHHHHHHH
Q psy4974 312 QYYQFSSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 312 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
++++++ +||..+.+.++++.+.+.++|
T Consensus 191 ~~~~~~-~gH~~~~~~~~~~~~~l~~~l 217 (218)
T 1auo_A 191 TWQEYP-MGHEVLPQEIHDIGAWLAARL 217 (218)
T ss_dssp EEEEES-CSSSCCHHHHHHHHHHHHHHH
T ss_pred EEEEec-CCCccCHHHHHHHHHHHHHHh
Confidence 999999 999998777766666665554
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-24 Score=184.52 Aligned_cols=189 Identities=13% Similarity=-0.022 Sum_probs=140.9
Q ss_pred CCCceEEEEcCcC---CCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 91 SGAQVLFFTYGVL---GEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 91 ~~~p~vv~lHG~~---~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
++.|+||++||++ ++ ...|..+++.|+++||.|+++|+|| ++.. ++.+.+++
T Consensus 61 ~~~p~vv~~HGgg~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~~-------------~~~~-----------~~~~~~~d 115 (262)
T 2pbl_A 61 TPVGLFVFVHGGYWMAFD-KSSWSHLAVGALSKGWAVAMPSYEL-------------CPEV-----------RISEITQQ 115 (262)
T ss_dssp SCSEEEEEECCSTTTSCC-GGGCGGGGHHHHHTTEEEEEECCCC-------------TTTS-----------CHHHHHHH
T ss_pred CCCCEEEEEcCcccccCC-hHHHHHHHHHHHhCCCEEEEeCCCC-------------CCCC-----------ChHHHHHH
Confidence 3457999999954 56 4888889999988899999999999 7542 34555666
Q ss_pred HHHHHHHhCC---ccEEEEEeChhHHHHHHHHHhC------CcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHH
Q psy4974 168 AYELLKLLGV---CKVSLFGWCDGGHLSFVFSMKY------PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS 238 (345)
Q Consensus 168 ~~~~l~~~~~---~~i~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (345)
+.++++.+.. ++++|+|||+||.+|+.+|.++ |++++++|+++|............
T Consensus 116 ~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~~~--------------- 180 (262)
T 2pbl_A 116 ISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSM--------------- 180 (262)
T ss_dssp HHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTT---------------
T ss_pred HHHHHHHHHHhccCCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhhhh---------------
Confidence 6666665543 5999999999999999999987 889999999998765322110000
Q ss_pred HHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCC
Q psy4974 239 EVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSS 318 (345)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~ 318 (345)
...+... ...... ......+..+++|+++++|++|.+++.+.++.+.+.++ ++++++++
T Consensus 181 --~~~~~~~---------------~~~~~~---~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~ 239 (262)
T 2pbl_A 181 --NEKFKMD---------------ADAAIA---ESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-ADHVIAFE 239 (262)
T ss_dssp --HHHHCCC---------------HHHHHH---TCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-CEEEEETT
T ss_pred --hhhhCCC---------------HHHHHh---cCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC-CeEEEeCC
Confidence 0000000 000000 11133456789999999999999999999999999998 99999999
Q ss_pred CCCcccccChHHHHHHHHHHHH
Q psy4974 319 GGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 319 ~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
+||+.+.++++.....+.+++.
T Consensus 240 ~~H~~~~~~~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 240 KHHFNVIEPLADPESDLVAVIT 261 (262)
T ss_dssp CCTTTTTGGGGCTTCHHHHHHH
T ss_pred CCcchHHhhcCCCCcHHHHHHh
Confidence 9999999999888888888764
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.1e-23 Score=172.56 Aligned_cols=187 Identities=14% Similarity=0.169 Sum_probs=137.5
Q ss_pred cCCCCceEEEEcCcCCCchhhHHHHHHhhCC--CCeEEEEeCCCCchhhhccCC------ccCCCCCCCCCCCCCCCccc
Q psy4974 89 YGSGAQVLFFTYGVLGEIRNSFKKQLTAFDP--KLFTSIFWDPPGNVVLYLLGK------TCSGYGQSLPKGRSFVPFQY 160 (345)
Q Consensus 89 ~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~--~G~~vi~~D~~G~~~~~~~g~------~~~~~G~s~~~~~~~~~~~~ 160 (345)
.++..|+||++||++++. ..|..+++.|++ .||.|+++|+||.+.....|. ...++|.+... ....
T Consensus 20 ~~~~~~~vv~lHG~~~~~-~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~-----~~~~ 93 (226)
T 3cn9_A 20 APNADACIIWLHGLGADR-TDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAI-----DEDQ 93 (226)
T ss_dssp CTTCCEEEEEECCTTCCG-GGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCB-----CHHH
T ss_pred CCCCCCEEEEEecCCCCh-HHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccc-----cchh
Confidence 344558999999999995 899999999986 789999998885111100110 11125533211 3335
Q ss_pred hHHHHHHHHHHHHHh---CC--ccEEEEEeChhHHHHHHHHH-hCCcccceeeEeccCCCCCchhHHHHHHhHhccCCCh
Q psy4974 161 IEEDVDIAYELLKLL---GV--CKVSLFGWCDGGHLSFVFSM-KYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSP 234 (345)
Q Consensus 161 ~~~~~~~~~~~l~~~---~~--~~i~lvGhS~Gg~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (345)
+.+.++++.++++.+ +. ++++++|||+||.+|+.+|. ++|++++++|++++........
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~--------------- 158 (226)
T 3cn9_A 94 LNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL--------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC---------------
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh---------------
Confidence 777788888888887 65 49999999999999999999 9999999999999865421000
Q ss_pred hhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----C
Q psy4974 235 MARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----F 310 (345)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~ 310 (345)
. -....+++|+++++|++|.++|.+.++.+.+.++ +
T Consensus 159 ------------~----------------------------~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~ 198 (226)
T 3cn9_A 159 ------------A----------------------------LDERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVE 198 (226)
T ss_dssp ------------C----------------------------CCTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCC
T ss_pred ------------h----------------------------hcccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCc
Confidence 0 0013467899999999999999999999988886 5
Q ss_pred cEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 311 CQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 311 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
.++++++ +||.++.+.++ .+.+||++
T Consensus 199 ~~~~~~~-~gH~~~~~~~~----~i~~~l~~ 224 (226)
T 3cn9_A 199 VGWHDYP-MGHEVSLEEIH----DIGAWLRK 224 (226)
T ss_dssp EEEEEES-CCSSCCHHHHH----HHHHHHHH
T ss_pred eeEEEec-CCCCcchhhHH----HHHHHHHh
Confidence 8999999 99998766554 45566554
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-22 Score=183.50 Aligned_cols=236 Identities=13% Similarity=0.054 Sum_probs=157.4
Q ss_pred eeeEEEcCceEEEEEc---C-CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKY---G-SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~---g-~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
...+..+|..+....+ + ...|+||++||++++....|..+...|.+.||.|+++|+|| +|.|.
T Consensus 170 ~v~i~~~g~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G-------------~G~s~ 236 (415)
T 3mve_A 170 QLEIPFEKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPS-------------VGYSS 236 (415)
T ss_dssp EEEEECSSSEEEEEEEESCSSSCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTT-------------SGGGT
T ss_pred EEEEEECCEEEEEEEEecCCCCCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCC-------------CCCCC
Confidence 3344457777765443 2 23379999999998843567777888988899999999999 99997
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHhC---CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh
Q psy4974 150 PKGRSFVPFQYIEEDVDIAYELLKLLG---VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM 226 (345)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 226 (345)
...... +....+.++.+++.... .++++++|||+||.+|+.+|..+|++|+++|+++|.........
T Consensus 237 ~~~~~~----~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~------ 306 (415)
T 3mve_A 237 KYPLTE----DYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASP------ 306 (415)
T ss_dssp TSCCCS----CTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCH------
T ss_pred CCCCCC----CHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccH------
Confidence 544322 34555666777766654 46899999999999999999999999999999998743211101
Q ss_pred HhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhcc--CCCCCCCEEEEEeCCCCCCChHHHHHH
Q psy4974 227 RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQEL--LPYVDVPVLVFHSADDVMVSTQQVQSL 304 (345)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~Pvl~i~G~~D~~v~~~~~~~~ 304 (345)
.............+...+...... ... +......+.... ... ..++++|+|+++|++|.++|.+.++.+
T Consensus 307 ~~~~~~~~~~~~~~~~~~g~~~~~----~~~----~~~~~~~~~~~~-~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l 377 (415)
T 3mve_A 307 QKLQQMPKMYLDVLASRLGKSVVD----IYS----LSGQMAAWSLKV-QGFLSSRKTKVPILAMSLEGDPVSPYSDNQMV 377 (415)
T ss_dssp HHHTTSCHHHHHHHHHHTTCSSBC----HHH----HHHHGGGGCTTT-TTTTTSSCBSSCEEEEEETTCSSSCHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHhCCCccC----HHH----HHHHHhhcCccc-ccccccCCCCCCEEEEEeCCCCCCCHHHHHHH
Confidence 111111222222233323222100 011 111111111100 011 357899999999999999999999999
Q ss_pred HhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 305 LNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 305 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
.+..++++++++++..+ .+.++++.+.+.+||+++.+
T Consensus 378 ~~~~~~~~l~~i~g~~~---h~~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 378 AFFSTYGKAKKISSKTI---TQGYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp HHTBTTCEEEEECCCSH---HHHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCCceEEEecCCCc---ccchHHHHHHHHHHHHHHhc
Confidence 99889999999997322 23678889999999988654
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-23 Score=177.65 Aligned_cols=180 Identities=17% Similarity=0.140 Sum_probs=136.1
Q ss_pred EEEcCC-CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEe--CCCCchhhhccCCccCCCCCCCCCC----CCCCCc
Q psy4974 86 FIKYGS-GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFW--DPPGNVVLYLLGKTCSGYGQSLPKG----RSFVPF 158 (345)
Q Consensus 86 ~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~--D~~G~~~~~~~g~~~~~~G~s~~~~----~~~~~~ 158 (345)
+...++ ..|+||++||++++. ..|..+++.|++. |.|+++ |++| +|.|.... ..+ ..
T Consensus 54 ~~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~-~~v~~~~~d~~g-------------~g~s~~~~~~~~~~~-~~ 117 (251)
T 2r8b_A 54 KSRAGVAGAPLFVLLHGTGGDE-NQFFDFGARLLPQ-ATILSPVGDVSE-------------HGAARFFRRTGEGVY-DM 117 (251)
T ss_dssp EEECCCTTSCEEEEECCTTCCH-HHHHHHHHHHSTT-SEEEEECCSEEE-------------TTEEESSCBCGGGCB-CH
T ss_pred EEeCCCCCCcEEEEEeCCCCCH-hHHHHHHHhcCCC-ceEEEecCCcCC-------------CCCcccccCCCCCcC-CH
Confidence 334443 458999999999994 9999999999986 999999 7888 88764211 122 33
Q ss_pred cchHHHHHHHHHHHHHh----CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCCh
Q psy4974 159 QYIEEDVDIAYELLKLL----GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSP 234 (345)
Q Consensus 159 ~~~~~~~~~~~~~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (345)
..+.+.++++.++++.+ +.++++++|||+||.+|+.+|.++|++++++|++++......
T Consensus 118 ~~~~~~~~~~~~~l~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~----------------- 180 (251)
T 2r8b_A 118 VDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP----------------- 180 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC-----------------
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc-----------------
Confidence 34444556666555544 788999999999999999999999999999999998765321
Q ss_pred hhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC--CcE
Q psy4974 235 MARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK--FCQ 312 (345)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~--~~~ 312 (345)
......+++|+++++|++|.++|.+.++.+.+.++ +.+
T Consensus 181 ----------------------------------------~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~ 220 (251)
T 2r8b_A 181 ----------------------------------------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGT 220 (251)
T ss_dssp ----------------------------------------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSE
T ss_pred ----------------------------------------cccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCe
Confidence 01123468899999999999999999999998887 566
Q ss_pred EE-EeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 313 YY-QFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 313 ~~-~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+. .++++||.++.+.+++ +.+||++.
T Consensus 221 ~~~~~~~~gH~~~~~~~~~----~~~~l~~~ 247 (251)
T 2r8b_A 221 VETVWHPGGHEIRSGEIDA----VRGFLAAY 247 (251)
T ss_dssp EEEEEESSCSSCCHHHHHH----HHHHHGGG
T ss_pred EEEEecCCCCccCHHHHHH----HHHHHHHh
Confidence 65 7788999997666554 55555543
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.1e-23 Score=172.66 Aligned_cols=202 Identities=9% Similarity=0.113 Sum_probs=144.7
Q ss_pred EEEcCceEEEEEc---CC--CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 77 FSIKGCDIRFIKY---GS--GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 77 ~~~~g~~l~~~~~---g~--~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
+..+|..+.+... +. ..|+||++||++++. ..|..+++.|+++||.|+++|++| +|.+...
T Consensus 11 ~~~~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~-~~~~~~~~~l~~~G~~v~~~d~~g-------------~g~~~~~ 76 (241)
T 3f67_A 11 IPSQGENMPAYHARPKNADGPLPIVIVVQEIFGVH-EHIRDLCRRLAQEGYLAIAPELYF-------------RQGDPNE 76 (241)
T ss_dssp EEETTEEEEEEEEEETTCCSCEEEEEEECCTTCSC-HHHHHHHHHHHHTTCEEEEECTTT-------------TTCCGGG
T ss_pred EecCCcceEEEEecCCCCCCCCCEEEEEcCcCccC-HHHHHHHHHHHHCCcEEEEecccc-------------cCCCCCc
Confidence 3447777765543 22 237999999999995 899999999999999999999999 8766433
Q ss_pred CCCCC-------CccchHHHHHHHHHHHHHhC-----CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh
Q psy4974 152 GRSFV-------PFQYIEEDVDIAYELLKLLG-----VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN 219 (345)
Q Consensus 152 ~~~~~-------~~~~~~~~~~~~~~~l~~~~-----~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 219 (345)
...+. .........+++.++++.+. .++++++|||+||.+++.++.++|+ +.+++++.+........
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~~~ 155 (241)
T 3f67_A 77 YHDIPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEKSL 155 (241)
T ss_dssp CCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCCCS
T ss_pred hhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCCcc
Confidence 32110 01123345666666666553 4589999999999999999999986 77777766543321100
Q ss_pred HHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH
Q psy4974 220 VRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ 299 (345)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~ 299 (345)
+. .......+.++++|+++++|++|.++|.+
T Consensus 156 ------------------------~~-------------------------~~~~~~~~~~~~~P~l~~~g~~D~~~~~~ 186 (241)
T 3f67_A 156 ------------------------NS-------------------------PKHPVDIAVDLNAPVLGLYGAKDASIPQD 186 (241)
T ss_dssp ------------------------SS-------------------------CCCHHHHGGGCCSCEEEEEETTCTTSCHH
T ss_pred ------------------------CC-------------------------ccCHHHhhhhcCCCEEEEEecCCCCCCHH
Confidence 00 00012223456899999999999999999
Q ss_pred HHHHHHhhc----CCcEEEEeCCCCCcccc--------cChHHHHHHHHHHHHhh
Q psy4974 300 QVQSLLNQL----KFCQYYQFSSGGHSCHI--------KHGQVFNEISRNFILEE 342 (345)
Q Consensus 300 ~~~~~~~~~----~~~~~~~~~~~gH~~~~--------~~~~~~~~~i~~fl~~~ 342 (345)
..+.+.+.+ ++++++++++++|.+.. +..++..+.+.+||+++
T Consensus 187 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 187 TVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 888888777 67899999999998763 23467888999999763
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-23 Score=179.92 Aligned_cols=197 Identities=10% Similarity=0.124 Sum_probs=136.6
Q ss_pred CceEEEEcCcC--CCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC--CCCCCCCCccchHHHHHHH
Q psy4974 93 AQVLFFTYGVL--GEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL--PKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 93 ~p~vv~lHG~~--~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~--~~~~~~~~~~~~~~~~~~~ 168 (345)
.|+||++||++ +.....|..+++.|+++||.|+++|+|| +|.+. .+. ...+..+.++.+
T Consensus 50 ~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g-------------~~~~~~~~~~----~~~d~~~~~~~l 112 (283)
T 3bjr_A 50 LPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTL-------------LTDQQPLGLA----PVLDLGRAVNLL 112 (283)
T ss_dssp EEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCC-------------TTTCSSCBTH----HHHHHHHHHHHH
T ss_pred CcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccC-------------CCccccCchh----HHHHHHHHHHHH
Confidence 37899999954 3334779999999999999999999999 88762 111 111222223333
Q ss_pred HHHHHHhCCc--cEEEEEeChhHHHHHHHHHhCCcc-------------cceeeEeccCCCCCchhHHHHHHhHhccCCC
Q psy4974 169 YELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYPHM-------------VHKLVIWGTKSFLTIDNVRVFEGMRRLSNWS 233 (345)
Q Consensus 169 ~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~-------------v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (345)
.+..+.++++ +++++|||+||.+|+.+|.++|++ ++++|+++|............
T Consensus 113 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~---------- 182 (283)
T 3bjr_A 113 RQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGFPKDD---------- 182 (283)
T ss_dssp HHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC--------------
T ss_pred HHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCcccccccccccc----------
Confidence 3333444544 899999999999999999999976 899999988764321100000
Q ss_pred hhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----
Q psy4974 234 PMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK---- 309 (345)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~---- 309 (345)
..... ++. .....+....+.++.+|+|+++|++|.++|.+.++.+.+.++
T Consensus 183 ----~~~~~-------~~~---------------~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~ 236 (283)
T 3bjr_A 183 ----ATLAT-------WTP---------------TPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKI 236 (283)
T ss_dssp --------C-------CCC---------------CGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTC
T ss_pred ----chHHH-------HHH---------------HhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCC
Confidence 00000 000 011112234466788999999999999999888888887774
Q ss_pred CcEEEEeCCCCCcccccCh-------------HHHHHHHHHHHHhh
Q psy4974 310 FCQYYQFSSGGHSCHIKHG-------------QVFNEISRNFILEE 342 (345)
Q Consensus 310 ~~~~~~~~~~gH~~~~~~~-------------~~~~~~i~~fl~~~ 342 (345)
++++++++++||.+..+.+ +++.+.+.+||+++
T Consensus 237 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 237 PYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp CEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred CeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 3599999999998776654 78899999999764
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=174.91 Aligned_cols=203 Identities=13% Similarity=0.124 Sum_probs=139.8
Q ss_pred CCceEEEEcCcC-----CCchhhHHHHHHhh----CCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchH
Q psy4974 92 GAQVLFFTYGVL-----GEIRNSFKKQLTAF----DPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIE 162 (345)
Q Consensus 92 ~~p~vv~lHG~~-----~~~~~~~~~~~~~L----~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~ 162 (345)
+.|+||++||++ ++ ...|..+++.| .+.||.|+++|+|+ .+....+ ..++
T Consensus 40 ~~p~vv~lHGgg~~~g~~~-~~~~~~~~~~L~~~a~~~g~~vi~~d~r~-------------~~~~~~~-------~~~~ 98 (273)
T 1vkh_A 40 TREAVIYIHGGAWNDPENT-PNDFNQLANTIKSMDTESTVCQYSIEYRL-------------SPEITNP-------RNLY 98 (273)
T ss_dssp CCEEEEEECCSTTTCTTCC-GGGGHHHHHHHHHHCTTCCEEEEEECCCC-------------TTTSCTT-------HHHH
T ss_pred CCeEEEEECCCcccCCcCC-hHHHHHHHHHHhhhhccCCcEEEEeeccc-------------CCCCCCC-------cHHH
Confidence 457999999965 34 47899999998 67789999999999 6543211 2456
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC-----------------CcccceeeEeccCCCCCchhHHHHHH
Q psy4974 163 EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY-----------------PHMVHKLVIWGTKSFLTIDNVRVFEG 225 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~-----------------p~~v~~lvl~~~~~~~~~~~~~~~~~ 225 (345)
+..+.+..+++.++.++++|+|||+||.+|+.+|.++ |++++++|++++.........
T Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~----- 173 (273)
T 1vkh_A 99 DAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLI----- 173 (273)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHH-----
T ss_pred HHHHHHHHHHHhCCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhh-----
Confidence 6677777778888889999999999999999999886 788999999988654211110
Q ss_pred hHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHH
Q psy4974 226 MRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLL 305 (345)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~ 305 (345)
.. ..........+......+..........+.. ....+++|+++++|++|.++|.+.++.+.
T Consensus 174 --~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~P~lii~G~~D~~vp~~~~~~~~ 235 (273)
T 1vkh_A 174 --EY----PEYDCFTRLAFPDGIQMYEEEPSRVMPYVKK------------ALSRFSIDMHLVHSYSDELLTLRQTNCLI 235 (273)
T ss_dssp --HC----GGGHHHHHHHCTTCGGGCCCCHHHHHHHHHH------------HHHHHTCEEEEEEETTCSSCCTHHHHHHH
T ss_pred --hc----ccHHHHHHHHhcccccchhhcccccChhhhh------------cccccCCCEEEEecCCcCCCChHHHHHHH
Confidence 00 0111111122211100011000000000000 11125789999999999999999888888
Q ss_pred hhcC----CcEEEEeCCCCCcccccChHHHHHHHHHHH
Q psy4974 306 NQLK----FCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 306 ~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
+.++ ++++++++++||..+.++ +++.+.|.+||
T Consensus 236 ~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 236 SCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp HHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHHTC
T ss_pred HHHHhcCCceEEEEeCCCcccccccC-hHHHHHHHHHc
Confidence 8774 479999999999999888 89999999887
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.9e-24 Score=180.33 Aligned_cols=210 Identities=16% Similarity=0.224 Sum_probs=130.3
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
.+++|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|..+ ...++ .+.+..+
T Consensus 12 ~~~~lv~lhg~g~~~-~~~~~~~~~L~~~-~~vi~~Dl~G-------------hG~S~~~-----~~~~~---~~~~~~~ 68 (242)
T 2k2q_B 12 EKTQLICFPFAGGYS-ASFRPLHAFLQGE-CEMLAAEPPG-------------HGTNQTS-----AIEDL---EELTDLY 68 (242)
T ss_dssp CCCEEESSCCCCHHH-HHHHHHHHHHCCS-CCCEEEECCS-------------SCCSCCC-----TTTHH---HHHHHHT
T ss_pred CCceEEEECCCCCCH-HHHHHHHHhCCCC-eEEEEEeCCC-------------CCCCCCC-----CcCCH---HHHHHHH
Confidence 346899999999995 9999999999876 9999999999 9999543 11233 3334444
Q ss_pred HHHhCC---ccEEEEEeChhHHHHHHHHHh------CCcccceeeEeccCCC-CCch------hHHHHHHhHhccCCChh
Q psy4974 172 LKLLGV---CKVSLFGWCDGGHLSFVFSMK------YPHMVHKLVIWGTKSF-LTID------NVRVFEGMRRLSNWSPM 235 (345)
Q Consensus 172 l~~~~~---~~i~lvGhS~Gg~ia~~~a~~------~p~~v~~lvl~~~~~~-~~~~------~~~~~~~~~~~~~~~~~ 235 (345)
++.++. ++++|+||||||.+|+.+|.+ +|+. +++.+.... .... .......+.........
T Consensus 69 ~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~---v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (242)
T 2k2q_B 69 KQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQA---VIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAE 145 (242)
T ss_dssp TTTCCCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCS---EEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCT
T ss_pred HHHHHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCE---EEEECCCCCCCCcccccCCCHHHHHHHHHHhCCCChH
Confidence 455555 589999999999999999987 4443 444332111 1000 00011110000000000
Q ss_pred hHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEE
Q psy4974 236 ARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQ 315 (345)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~ 315 (345)
.... .... . ...... ...+....... ...+.++++|+++++|++|.+++ .....+.+..++..+++
T Consensus 146 ~~~~-~~~~-~---~~~~~~-------~~~~~~~~~~~-~~~l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~~~~~~~~ 211 (242)
T 2k2q_B 146 LVEN-KEVM-S---FFLPSF-------RSDYRALEQFE-LYDLAQIQSPVHVFNGLDDKKCI-RDAEGWKKWAKDITFHQ 211 (242)
T ss_dssp TTHH-HHTT-T---TCCSCH-------HHHHHHHTCCC-CSCCTTCCCSEEEEEECSSCCHH-HHHHHHHTTCCCSEEEE
T ss_pred HhcC-HHHH-H---HHHHHH-------HHHHHHHHhcc-cCCCCccCCCEEEEeeCCCCcCH-HHHHHHHHHhcCCeEEE
Confidence 0000 0000 0 000011 11111111111 11267899999999999998865 44566777777888888
Q ss_pred eCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 316 FSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 316 ~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
++ +||+++.++|+++++.|.+||++.
T Consensus 212 ~~-~gH~~~~e~p~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 212 FD-GGHMFLLSQTEEVAERIFAILNQH 237 (242)
T ss_dssp EE-CCCSHHHHHCHHHHHHHHHHHHTT
T ss_pred Ee-CCceeEcCCHHHHHHHHHHHhhcc
Confidence 87 599999999999999999999865
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.4e-22 Score=175.87 Aligned_cols=214 Identities=14% Similarity=0.101 Sum_probs=145.3
Q ss_pred CCCCceEEEEcCc--CCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 90 GSGAQVLFFTYGV--LGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 90 g~~~p~vv~lHG~--~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
+.+.|+|||+||+ +++ ...|..+++.|. .||+|+++|+|| ||.+.... .++++++++
T Consensus 78 ~~~~~~lv~lhG~~~~~~-~~~~~~~~~~L~-~~~~v~~~d~~G-------------~G~~~~~~------~~~~~~~~~ 136 (319)
T 3lcr_A 78 GQLGPQLILVCPTVMTTG-PQVYSRLAEELD-AGRRVSALVPPG-------------FHGGQALP------ATLTVLVRS 136 (319)
T ss_dssp CCSSCEEEEECCSSTTCS-GGGGHHHHHHHC-TTSEEEEEECTT-------------SSTTCCEE------SSHHHHHHH
T ss_pred CCCCCeEEEECCCCcCCC-HHHHHHHHHHhC-CCceEEEeeCCC-------------CCCCCCCC------CCHHHHHHH
Confidence 3445799999995 566 489999999995 469999999999 99764432 267788888
Q ss_pred HHHHHHHh-CCccEEEEEeChhHHHHHHHHHhC---CcccceeeEeccCCCCCc--hhHHHHHHhHhccCCChhhHHHHH
Q psy4974 168 AYELLKLL-GVCKVSLFGWCDGGHLSFVFSMKY---PHMVHKLVIWGTKSFLTI--DNVRVFEGMRRLSNWSPMARSEVL 241 (345)
Q Consensus 168 ~~~~l~~~-~~~~i~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
+.+.+..+ +.++++|+||||||.+|+.+|.++ |++++++|++++...... ........+.. .......
T Consensus 137 ~~~~l~~~~~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 210 (319)
T 3lcr_A 137 LADVVQAEVADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALN------ERFVEYL 210 (319)
T ss_dssp HHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHH------HHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHH------HHHhhhh
Confidence 88887776 557999999999999999999987 788999999998765433 22111111100 0000000
Q ss_pred HHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC-cEEEEeCCCC
Q psy4974 242 KAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF-CQYYQFSSGG 320 (345)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~g 320 (345)
.+... . .....+..+...+...... ....+++|+|+|+|++| .+++.....+.+.+++ .+++.++ ++
T Consensus 211 -~~~~~----~-~~~~~l~~~~~~~~~~~~~----~~~~i~~PvLli~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~-g~ 278 (319)
T 3lcr_A 211 -RLTGG----G-NLSQRITAQVWCLELLRGW----RPEGLTAPTLYVRPAQP-LVEQEKPEWRGDVLAAMGQVVEAP-GD 278 (319)
T ss_dssp -HHHCC----C-CHHHHHHHHHHHHHHTTTC----CCCCCSSCEEEEEESSC-SSSCCCTHHHHHHHHTCSEEEEES-SC
T ss_pred -cccCC----C-chhHHHHHHHHHHHHHhcC----CCCCcCCCEEEEEeCCC-CCCcccchhhhhcCCCCceEEEeC-CC
Confidence 00000 0 0012222222222222221 23678999999999985 5555666677766654 6788887 68
Q ss_pred Cccccc--ChHHHHHHHHHHHHhh
Q psy4974 321 HSCHIK--HGQVFNEISRNFILEE 342 (345)
Q Consensus 321 H~~~~~--~~~~~~~~i~~fl~~~ 342 (345)
|+.+++ +|+++++.|.+||.+.
T Consensus 279 H~~~~~~~~~~~va~~i~~fL~~~ 302 (319)
T 3lcr_A 279 HFTIIEGEHVASTAHIVGDWLREA 302 (319)
T ss_dssp TTGGGSTTTHHHHHHHHHHHHHHH
T ss_pred cHHhhCcccHHHHHHHHHHHHHhc
Confidence 888886 8999999999999865
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.90 E-value=9.6e-23 Score=178.67 Aligned_cols=208 Identities=12% Similarity=0.127 Sum_probs=142.8
Q ss_pred CCceEEEEcCcCCCch--hhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIR--NSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~--~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
+.|+|||+||++++ . ..|..+...|... |.|+++|+|| ||.|... .+ +++++++++.
T Consensus 66 ~~~~lvllhG~~~~-~~~~~~~~~~~~l~~~-~~v~~~d~~G-------------~G~s~~~--~~----~~~~~a~~~~ 124 (300)
T 1kez_A 66 GEVTVICCAGTAAI-SGPHEFTRLAGALRGI-APVRAVPQPG-------------YEEGEPL--PS----SMAAVAAVQA 124 (300)
T ss_dssp CSSEEEECCCSSTT-CSTTTTHHHHHHTSSS-CCBCCCCCTT-------------SSTTCCB--CS----SHHHHHHHHH
T ss_pred CCCeEEEECCCccc-CcHHHHHHHHHhcCCC-ceEEEecCCC-------------CCCCCCC--CC----CHHHHHHHHH
Confidence 44799999999986 4 7899999999876 9999999999 9998543 22 6778888887
Q ss_pred -HHHHHhCCccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCCCCchhHH-HHHHhHhccCCChhhHHHHHHHc
Q psy4974 170 -ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSFLTIDNVR-VFEGMRRLSNWSPMARSEVLKAY 244 (345)
Q Consensus 170 -~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
.+++.++.++++|+||||||.+|+.+|.++| ++|+++|++++.......... ....+ ....+
T Consensus 125 ~~l~~~~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~-------------~~~~~ 191 (300)
T 1kez_A 125 DAVIRTQGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEEL-------------TATLF 191 (300)
T ss_dssp HHHHHHCSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHH-------------HGGGC
T ss_pred HHHHHhcCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHH-------------HHHHH
Confidence 4667778889999999999999999999988 489999999987654321111 10000 00111
Q ss_pred ccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-CcEEEEeCCCCCcc
Q psy4974 245 DNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-FCQYYQFSSGGHSC 323 (345)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH~~ 323 (345)
.... ..........+......... .....+++|+++|+|+ |.++++.. ..+.+.++ +.+++++++ ||+.
T Consensus 192 ~~~~---~~~~~~~~~~~~~~~~~~~~----~~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~~~~~~~~~~i~g-gH~~ 261 (300)
T 1kez_A 192 DRET---VRMDDTRLTALGAYDRLTGQ----WRPRETGLPTLLVSAG-EPMGPWPD-DSWKPTWPFEHDTVAVPG-DHFT 261 (300)
T ss_dssp CCCS---SCCCHHHHHHHHHHHHHTTT----CCCCCCSCCBEEEEES-SCSSCCCS-SCCSCCCSSCCEEEEESS-CTTT
T ss_pred hCcC---CccchHHHHHHHHHHHHHhc----CCCCCCCCCEEEEEeC-CCCCCCcc-cchhhhcCCCCeEEEecC-CChh
Confidence 1110 00001111112222221111 1346789999999995 55555433 34555555 479999998 9999
Q ss_pred cc-cChHHHHHHHHHHHHhhc
Q psy4974 324 HI-KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 324 ~~-~~~~~~~~~i~~fl~~~~ 343 (345)
++ ++|+++++.|.+||.+..
T Consensus 262 ~~~e~~~~~~~~i~~fl~~~~ 282 (300)
T 1kez_A 262 MVQEHADAIARHIDAWLGGGN 282 (300)
T ss_dssp SSSSCSHHHHHHHHHHHTCC-
T ss_pred hccccHHHHHHHHHHHHHhcc
Confidence 97 899999999999998654
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-22 Score=174.27 Aligned_cols=195 Identities=13% Similarity=0.122 Sum_probs=129.4
Q ss_pred CceEEEEcC---cCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHH---H
Q psy4974 93 AQVLFFTYG---VLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDV---D 166 (345)
Q Consensus 93 ~p~vv~lHG---~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~---~ 166 (345)
.|+||++|| ..++ ...|..+++.|+++||.|+++|+|| +|.+.. .+ . ....+.. +
T Consensus 35 ~p~vv~~HGgg~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g-------------~g~~~~---~~-~-~~~~d~~~~~~ 95 (277)
T 3bxp_A 35 YPIMIICPGGGFTYHS-GREEAPIATRMMAAGMHTVVLNYQL-------------IVGDQS---VY-P-WALQQLGATID 95 (277)
T ss_dssp EEEEEEECCSTTTSCC-CTTHHHHHHHHHHTTCEEEEEECCC-------------STTTCC---CT-T-HHHHHHHHHHH
T ss_pred ccEEEEECCCccccCC-CccchHHHHHHHHCCCEEEEEeccc-------------CCCCCc---cC-c-hHHHHHHHHHH
Confidence 478999999 4455 4789999999988899999999999 995432 22 1 1222222 2
Q ss_pred HHHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhC--------------CcccceeeEeccCCCCCchhHHHHHHhHhcc
Q psy4974 167 IAYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKY--------------PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS 230 (345)
Q Consensus 167 ~~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~--------------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 230 (345)
.+.+..+.+++ ++++++|||+||.+|+.+|.++ +.+++++|+++|........
T Consensus 96 ~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~----------- 164 (277)
T 3bxp_A 96 WITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAGF----------- 164 (277)
T ss_dssp HHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSSS-----------
T ss_pred HHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCCC-----------
Confidence 23333333344 4899999999999999999985 67899999999875422110
Q ss_pred CCChhhHHHHH-HHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC
Q psy4974 231 NWSPMARSEVL-KAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK 309 (345)
Q Consensus 231 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~ 309 (345)
... .... ..+. ..........+..+.+|+|+++|++|.++|.+.++.+.+.++
T Consensus 165 --~~~--~~~~~~~~~----------------------~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~ 218 (277)
T 3bxp_A 165 --PTT--SAARNQITT----------------------DARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAML 218 (277)
T ss_dssp --SSS--HHHHHHHCS----------------------CGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHH
T ss_pred --CCc--cccchhccc----------------------hhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHH
Confidence 000 0000 0000 111122234456678899999999999999888888877663
Q ss_pred ----CcEEEEeCCCCCcccccC---------------hHHHHHHHHHHHHhhc
Q psy4974 310 ----FCQYYQFSSGGHSCHIKH---------------GQVFNEISRNFILEEN 343 (345)
Q Consensus 310 ----~~~~~~~~~~gH~~~~~~---------------~~~~~~~i~~fl~~~~ 343 (345)
+++++++++++|.+.... .+++.+.+.+||++..
T Consensus 219 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 219 QHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 469999999999654443 4778899999998764
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-22 Score=178.89 Aligned_cols=232 Identities=13% Similarity=0.133 Sum_probs=145.7
Q ss_pred eeeEEEcCceEEEEEcC-CCCceEEEEcCcC---CCchhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYG-SGAQVLFFTYGVL---GEIRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQS 148 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g-~~~p~vv~lHG~~---~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s 148 (345)
...++.+|..+++.... .+.|+||++||++ ++ ...|..++..|+. .||.|+++|+|| .+..
T Consensus 76 ~~~~~~~~~~~~~~~p~~~~~p~vv~lHGgg~~~~~-~~~~~~~~~~la~~~g~~vi~~D~r~-------------~~~~ 141 (326)
T 3d7r_A 76 LEKLSLDDMQVFRFNFRHQIDKKILYIHGGFNALQP-SPFHWRLLDKITLSTLYEVVLPIYPK-------------TPEF 141 (326)
T ss_dssp EEEEEETTEEEEEEESTTCCSSEEEEECCSTTTSCC-CHHHHHHHHHHHHHHCSEEEEECCCC-------------TTTS
T ss_pred EEEEEECCEEEEEEeeCCCCCeEEEEECCCcccCCC-CHHHHHHHHHHHHHhCCEEEEEeCCC-------------CCCC
Confidence 34456678888765543 3457999999965 35 3788888888874 489999999999 5432
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcc----cceeeEeccCCCCCchhHHHH-
Q psy4974 149 LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHM----VHKLVIWGTKSFLTIDNVRVF- 223 (345)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~- 223 (345)
. ....+++..+.+..+++.++.++++|+|||+||.+|+.+|.++|++ ++++|+++|............
T Consensus 142 ~-------~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~ 214 (326)
T 3d7r_A 142 H-------IDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISD 214 (326)
T ss_dssp C-------HHHHHHHHHHHHHHHHHHHCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCH
T ss_pred C-------chHHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHh
Confidence 1 1124556666677777778888999999999999999999988776 999999999765322111000
Q ss_pred HHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCCh--HHH
Q psy4974 224 EGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST--QQV 301 (345)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~--~~~ 301 (345)
................+...+...... ...........+..+ +|+|+++|++|..++. ...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~-~P~lii~G~~D~~~~~~~~~~ 277 (326)
T 3d7r_A 215 ALIEQDAVLSQFGVNEIMKKWANGLPL----------------TDKRISPINGTIEGL-PPVYMFGGGREMTHPDMKLFE 277 (326)
T ss_dssp HHHHHCSSCCHHHHHHHHHHHHTTSCT----------------TSTTTSGGGSCCTTC-CCEEEEEETTSTTHHHHHHHH
T ss_pred hhcccCcccCHHHHHHHHHHhcCCCCC----------------CCCeECcccCCcccC-CCEEEEEeCcccchHHHHHHH
Confidence 000000000000000000000000000 000000111122222 5999999999975442 133
Q ss_pred HHHHhhcCCcEEEEeCCCCCcccc---cChHHHHHHHHHHHHhhc
Q psy4974 302 QSLLNQLKFCQYYQFSSGGHSCHI---KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~i~~fl~~~~ 343 (345)
+.+.+..++++++++++++|.++. ++++++.+.|.+||++..
T Consensus 278 ~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l 322 (326)
T 3d7r_A 278 QMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDV 322 (326)
T ss_dssp HHHHHTTCCEEEEEETTCCTTGGGSSSHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHCCCcEEEEEeCCCcccccccCCHHHHHHHHHHHHHHHHHh
Confidence 444444567899999999999888 889999999999998754
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-23 Score=172.04 Aligned_cols=185 Identities=10% Similarity=0.013 Sum_probs=124.4
Q ss_pred ceEEEEcCcCCCchhhH--HHHHHhhCCC--CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSF--KKQLTAFDPK--LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~--~~~~~~L~~~--G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
|+||++||+.++. ..| ..+.+.+.+. +|+|+++|+|| +|.+ ..+++.
T Consensus 3 ptIl~lHGf~ss~-~s~k~~~l~~~~~~~~~~~~v~~pdl~~-------------~g~~---------------~~~~l~ 53 (202)
T 4fle_A 3 STLLYIHGFNSSP-SSAKATTFKSWLQQHHPHIEMQIPQLPP-------------YPAE---------------AAEMLE 53 (202)
T ss_dssp CEEEEECCTTCCT-TCHHHHHHHHHHHHHCTTSEEECCCCCS-------------SHHH---------------HHHHHH
T ss_pred cEEEEeCCCCCCC-CccHHHHHHHHHHHcCCCcEEEEeCCCC-------------CHHH---------------HHHHHH
Confidence 7999999998885 444 3344555543 49999999999 7532 356677
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCc
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVN 249 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (345)
.+++....++++|+||||||.+|+.+|.++|..+..++...+.... .......... .....
T Consensus 54 ~~~~~~~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~----------~~~~~-- 114 (202)
T 4fle_A 54 SIVMDKAGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFEL-------LSDYLGENQN----------PYTGQ-- 114 (202)
T ss_dssp HHHHHHTTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHH-------GGGGCEEEEC----------TTTCC--
T ss_pred HHHHhcCCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHH-------HHHhhhhhcc----------ccccc--
Confidence 7888888899999999999999999999999877666654432110 0000000000 00000
Q ss_pred hhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChH
Q psy4974 250 YITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQ 329 (345)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 329 (345)
.... ....... . ........++++|+|+|+|++|.+||.+.++++. +++++.+++|+||.+ ++++
T Consensus 115 ~~~~-~~~~~~~----~-----~~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~---~~~~l~i~~g~~H~~--~~~~ 179 (202)
T 4fle_A 115 KYVL-ESRHIYD----L-----KAMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYY---TPCRQTVESGGNHAF--VGFD 179 (202)
T ss_dssp EEEE-CHHHHHH----H-----HTTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHT---TTSEEEEESSCCTTC--TTGG
T ss_pred cccc-hHHHHHH----H-----HhhhhhhhccCceEEEEEeCCCCCCCHHHHHHHh---hCCEEEEECCCCcCC--CCHH
Confidence 0000 0000000 0 1113445678899999999999999998887764 578999999999964 5677
Q ss_pred HHHHHHHHHHHh
Q psy4974 330 VFNEISRNFILE 341 (345)
Q Consensus 330 ~~~~~i~~fl~~ 341 (345)
++.+.|.+||+-
T Consensus 180 ~~~~~I~~FL~~ 191 (202)
T 4fle_A 180 HYFSPIVTFLGL 191 (202)
T ss_dssp GGHHHHHHHHTC
T ss_pred HHHHHHHHHHhh
Confidence 888999999974
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-22 Score=172.74 Aligned_cols=180 Identities=13% Similarity=0.091 Sum_probs=135.8
Q ss_pred ceEEEEEc----CCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 82 CDIRFIKY----GSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 82 ~~l~~~~~----g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
..+++-.. |...|+|||+||++++. ..|..+++.|+++||.|+++|+|| .+ .
T Consensus 34 ~~~~~p~~~~~~g~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~~-------------s~----------~ 89 (258)
T 2fx5_A 34 CRIYRPRDLGQGGVRHPVILWGNGTGAGP-STYAGLLSHWASHGFVVAAAETSN-------------AG----------T 89 (258)
T ss_dssp EEEEEESSTTGGGCCEEEEEEECCTTCCG-GGGHHHHHHHHHHTCEEEEECCSC-------------CT----------T
T ss_pred EEEEeCCCCcccCCCceEEEEECCCCCCc-hhHHHHHHHHHhCCeEEEEecCCC-------------Cc----------c
Confidence 45555443 22447899999999994 999999999999899999999998 31 1
Q ss_pred ccchHHHHHHHHHHHH--------HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhc
Q psy4974 158 FQYIEEDVDIAYELLK--------LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRL 229 (345)
Q Consensus 158 ~~~~~~~~~~~~~~l~--------~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 229 (345)
...+....+.+.+... .++.++++++||||||.+++.+| .++++++++++++.....
T Consensus 90 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~------------- 154 (258)
T 2fx5_A 90 GREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGL------------- 154 (258)
T ss_dssp SHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSST-------------
T ss_pred HHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccccc-------------
Confidence 1123333444444332 33456899999999999999988 456899999998754310
Q ss_pred cCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHH-HHHHHhhc
Q psy4974 230 SNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ-VQSLLNQL 308 (345)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~-~~~~~~~~ 308 (345)
... ...+.++++|+|+++|++|.++|.+. .+.+.+..
T Consensus 155 ---------------~~~---------------------------~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 192 (258)
T 2fx5_A 155 ---------------GHD---------------------------SASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRA 192 (258)
T ss_dssp ---------------TCC---------------------------GGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHC
T ss_pred ---------------ccc---------------------------hhhhccCCCCEEEEEcCCCcccCchhhHHHHHhcc
Confidence 000 12345678999999999999999886 77777764
Q ss_pred -CCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 309 -KFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 309 -~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
.+.++++++++||+.+.++++++.+.+.+||++.
T Consensus 193 ~~~~~~~~~~g~~H~~~~~~~~~~~~~i~~fl~~~ 227 (258)
T 2fx5_A 193 NVPVFWGERRYVSHFEPVGSGGAYRGPSTAWFRFQ 227 (258)
T ss_dssp SSCEEEEEESSCCTTSSTTTCGGGHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCccccchHHHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999854
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-21 Score=171.72 Aligned_cols=227 Identities=13% Similarity=0.023 Sum_probs=142.4
Q ss_pred cCceEEEEEc---C-CCCceEEEEcCcCCC-chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC
Q psy4974 80 KGCDIRFIKY---G-SGAQVLFFTYGVLGE-IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS 154 (345)
Q Consensus 80 ~g~~l~~~~~---g-~~~p~vv~lHG~~~~-~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~ 154 (345)
+|..+.+... + ...|+||++||++++ . ..|.... .|++.||.|+++|+|| +|.|......
T Consensus 65 ~g~~i~~~~~~P~~~~~~p~vv~~HG~~~~~~-~~~~~~~-~l~~~g~~v~~~d~rg-------------~g~s~~~~~~ 129 (318)
T 1l7a_A 65 GNARITGWYAVPDKEGPHPAIVKYHGYNASYD-GEIHEMV-NWALHGYATFGMLVRG-------------QQRSEDTSIS 129 (318)
T ss_dssp GGEEEEEEEEEESSCSCEEEEEEECCTTCCSG-GGHHHHH-HHHHTTCEEEEECCTT-------------TSSSCCCCCC
T ss_pred CCCEEEEEEEeeCCCCCccEEEEEcCCCCCCC-CCccccc-chhhCCcEEEEecCCC-------------CCCCCCcccc
Confidence 6766665443 2 233789999999988 6 7777665 6666799999999999 9988654210
Q ss_pred -------CC--Cc-----cchHHHHHHHHHHHHHhC------CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 155 -------FV--PF-----QYIEEDVDIAYELLKLLG------VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 155 -------~~--~~-----~~~~~~~~~~~~~l~~~~------~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
+. .. ..+...++|+.++++.+. .++++++|||+||.+|+.+|..+|+ ++++|+++|...
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~ 208 (318)
T 1l7a_A 130 PHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLS 208 (318)
T ss_dssp SSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSC
T ss_pred cCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCccc
Confidence 00 00 013444555555555442 2589999999999999999999875 888888777543
Q ss_pred CCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCC
Q psy4974 215 LTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDV 294 (345)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~ 294 (345)
.... ... ......+. .......... . .. .. ...+......+....+.++++|+++++|++|.
T Consensus 209 ~~~~---~~~-~~~~~~~~--~~~~~~~~~~-~----~~----~~---~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~ 270 (318)
T 1l7a_A 209 NFER---AID-VALEQPYL--EINSFFRRNG-S----PE----TE---VQAMKTLSYFDIMNLADRVKVPVLMSIGLIDK 270 (318)
T ss_dssp CHHH---HHH-HCCSTTTT--HHHHHHHHSC-C----HH----HH---HHHHHHHHTTCHHHHGGGCCSCEEEEEETTCS
T ss_pred CHHH---HHh-cCCcCccH--HHHHHHhccC-C----cc----cH---HHHHHhhccccHHHHHhhCCCCEEEEeccCCC
Confidence 1110 000 00000010 0001111100 0 00 00 01111111112233455678999999999999
Q ss_pred CCChHHHHHHHhhcCC-cEEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 295 MVSTQQVQSLLNQLKF-CQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 295 ~v~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
++|.+..+.+.+.++. +++++++++||.. ..++.+.+.+||++..+
T Consensus 271 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~~----~~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 271 VTPPSTVFAAYNHLETKKELKVYRYFGHEY----IPAFQTEKLAFFKQILK 317 (318)
T ss_dssp SSCHHHHHHHHHHCCSSEEEEEETTCCSSC----CHHHHHHHHHHHHHHHC
T ss_pred CCCcccHHHHHhhcCCCeeEEEccCCCCCC----cchhHHHHHHHHHHHhC
Confidence 9999999999998874 8999999999983 45667888888877644
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=174.92 Aligned_cols=212 Identities=14% Similarity=0.120 Sum_probs=144.6
Q ss_pred EEcCceEEEEEcCC-------CCceEEEEcCcC---CCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCC
Q psy4974 78 SIKGCDIRFIKYGS-------GAQVLFFTYGVL---GEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQ 147 (345)
Q Consensus 78 ~~~g~~l~~~~~g~-------~~p~vv~lHG~~---~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~ 147 (345)
..+|..+.+....+ ..|+||++||++ ++ ...|..++..|+++||.|+++|+|| +|.
T Consensus 21 ~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g-------------~g~ 86 (276)
T 3hxk_A 21 LNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHIS-QRESDPLALAFLAQGYQVLLLNYTV-------------MNK 86 (276)
T ss_dssp CBTTBEEEEECCCC------CCBCEEEEECCSTTTSCC-GGGSHHHHHHHHHTTCEEEEEECCC-------------TTS
T ss_pred CCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCC-chhhHHHHHHHHHCCCEEEEecCcc-------------CCC
Confidence 34667777655432 237999999944 44 4788889999998999999999999 988
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHh-CCcccceeeEeccCCCCCchhH
Q psy4974 148 SLPKGRSFVPFQYIEEDVDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMK-YPHMVHKLVIWGTKSFLTIDNV 220 (345)
Q Consensus 148 s~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~ 220 (345)
|.... ......+.+.++.+++... +.++++++|||+||.+|+.+|.. .+.+++++|+++|.........
T Consensus 87 s~~~~----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~ 162 (276)
T 3hxk_A 87 GTNYN----FLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWP 162 (276)
T ss_dssp CCCSC----THHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCS
T ss_pred cCCCC----cCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCC
Confidence 75221 1112222222233333332 33599999999999999999988 7889999999998765322100
Q ss_pred HHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHH
Q psy4974 221 RVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ 300 (345)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~ 300 (345)
.......+ +... . ........+.++.+|+++++|++|.++|.+.
T Consensus 163 ----~~~~~~~~-----------~~~~--~-------------------~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~ 206 (276)
T 3hxk_A 163 ----SDLSHFNF-----------EIEN--I-------------------SEYNISEKVTSSTPPTFIWHTADDEGVPIYN 206 (276)
T ss_dssp ----SSSSSSCC-----------CCSC--C-------------------GGGBTTTTCCTTSCCEEEEEETTCSSSCTHH
T ss_pred ----cchhhhhc-----------Cchh--h-------------------hhCChhhccccCCCCEEEEecCCCceeChHH
Confidence 00000000 0000 0 1112234466778999999999999999988
Q ss_pred HHHHHhhcC----CcEEEEeCCCCCcccccCh-------------HHHHHHHHHHHHhhc
Q psy4974 301 VQSLLNQLK----FCQYYQFSSGGHSCHIKHG-------------QVFNEISRNFILEEN 343 (345)
Q Consensus 301 ~~~~~~~~~----~~~~~~~~~~gH~~~~~~~-------------~~~~~~i~~fl~~~~ 343 (345)
++.+.+.++ ++++++++++||.+....+ +++.+.+.+||++..
T Consensus 207 ~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 266 (276)
T 3hxk_A 207 SLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQI 266 (276)
T ss_dssp HHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCeEEEEECCCCCCccccCccccccccccCchHHHHHHHHHHHHHhCc
Confidence 888877763 4599999999998776544 678889999998765
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.8e-22 Score=176.98 Aligned_cols=237 Identities=11% Similarity=0.074 Sum_probs=147.0
Q ss_pred cCceEEEEEc---C---CCCceEEEEcCcCCCchhhHHH-HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 80 KGCDIRFIKY---G---SGAQVLFFTYGVLGEIRNSFKK-QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 80 ~g~~l~~~~~---g---~~~p~vv~lHG~~~~~~~~~~~-~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
+|..+++..+ + ...|+||++||++++. ..|.. +++.|+++||.|+++|+|| +|.|....
T Consensus 77 ~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g-------------~g~s~~~~ 142 (367)
T 2hdw_A 77 YGITLAADLYLPKNRGGDRLPAIVIGGPFGAVK-EQSSGLYAQTMAERGFVTLAFDPSY-------------TGESGGQP 142 (367)
T ss_dssp TSCEEEEEEEEESSCCSSCEEEEEEECCTTCCT-TSHHHHHHHHHHHTTCEEEEECCTT-------------STTSCCSS
T ss_pred CCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcc-hhhHHHHHHHHHHCCCEEEEECCCC-------------cCCCCCcC
Confidence 5777776543 2 2337899999999884 77765 7889998999999999999 99887544
Q ss_pred CCCCCccchHHHHHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh-------
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN------- 219 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~------- 219 (345)
..+ ......++++.++++.+ +.++++++|||+||.+++.+|..+| +++++|+++|........
T Consensus 143 ~~~---~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~~~~~~~~~~~~ 218 (367)
T 2hdw_A 143 RNV---ASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMTRVMSKGYNDSV 218 (367)
T ss_dssp SSC---CCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHHHHHHHTTTTCC
T ss_pred ccc---cchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccccHHHhhhhcccc
Confidence 332 23445556665555544 2458999999999999999999998 699999998752100000
Q ss_pred -HH-HHHHhHhccCCChhhHHHHHHHcccCCch---hh---hhHHHHHHHHHHHHH----------------------hh
Q psy4974 220 -VR-VFEGMRRLSNWSPMARSEVLKAYDNDVNY---IT---GIFNQYVDMVNLIFK----------------------SY 269 (345)
Q Consensus 220 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~----------------------~~ 269 (345)
.. ........ ..............+ .. .............+. ..
T Consensus 219 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (367)
T 2hdw_A 219 TLEQRTRTLEQL------GQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSF 292 (367)
T ss_dssp CHHHHHHHHHHH------HHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHH
T ss_pred chHHHHHHHHHH------HHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHh
Confidence 00 00000000 000000000000000 00 000000011111110 01
Q ss_pred CchhhhccCCCCC-CCEEEEEeCCCCCCChHHHHHHHhh-cCCcEEEEeCCCCCcccccChHH-HHHHHHHHHHhh
Q psy4974 270 GRNVYQELLPYVD-VPVLVFHSADDVMVSTQQVQSLLNQ-LKFCQYYQFSSGGHSCHIKHGQV-FNEISRNFILEE 342 (345)
Q Consensus 270 ~~~~~~~~l~~i~-~Pvl~i~G~~D~~v~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~~-~~~~i~~fl~~~ 342 (345)
...+....+.+++ +|+|+++|++|. +.+.++.+.+. .+++++++++++||..+.+.++. +.+.+.+||+++
T Consensus 293 ~~~~~~~~~~~i~~~PvLii~G~~D~--~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~ 366 (367)
T 2hdw_A 293 MNMPILTYIKEISPRPILLIHGERAH--SRYFSETAYAAAAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEH 366 (367)
T ss_dssp TTSCSCTTGGGGTTSCEEEEEETTCT--THHHHHHHHHHSCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHH
T ss_pred cCCChhHhHHhhcCCceEEEecCCCC--CHHHHHHHHHhCCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhh
Confidence 1112234456778 999999999998 77788888774 46789999999999988877765 589999999864
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.9e-22 Score=173.60 Aligned_cols=217 Identities=13% Similarity=0.025 Sum_probs=139.4
Q ss_pred CceEEEEcCcC---CCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 93 AQVLFFTYGVL---GEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 93 ~p~vv~lHG~~---~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.|+||++||++ ++. ..|..++..|++. ||.|+++|+|| +|.+..+. ...+..+.++++
T Consensus 73 ~p~vv~~HGgg~~~g~~-~~~~~~~~~la~~~g~~v~~~d~rg-------------~g~~~~~~----~~~d~~~~~~~l 134 (311)
T 2c7b_A 73 LPAVLYYHGGGFVFGSI-ETHDHICRRLSRLSDSVVVSVDYRL-------------APEYKFPT----AVEDAYAALKWV 134 (311)
T ss_dssp EEEEEEECCSTTTSCCT-GGGHHHHHHHHHHHTCEEEEECCCC-------------TTTSCTTH----HHHHHHHHHHHH
T ss_pred CcEEEEECCCcccCCCh-hhhHHHHHHHHHhcCCEEEEecCCC-------------CCCCCCCc----cHHHHHHHHHHH
Confidence 37899999998 774 8899999999875 89999999999 98874332 222344445555
Q ss_pred HHHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCc----ccceeeEeccCCCCCc---hhHHHHHHhHhccCCChhhHHH
Q psy4974 169 YELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPH----MVHKLVIWGTKSFLTI---DNVRVFEGMRRLSNWSPMARSE 239 (345)
Q Consensus 169 ~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 239 (345)
.+.++.+++ ++++|+|||+||.+|+.+|.++|+ .++++|+++|...... .....+....... +.......
T Consensus 135 ~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 213 (311)
T 2c7b_A 135 ADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASLVEFGVAETTS-LPIELMVW 213 (311)
T ss_dssp HHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHHHHHHHCTTCS-SCHHHHHH
T ss_pred HhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCCccHHHhccCC-CCHHHHHH
Confidence 566666676 589999999999999999988776 4999999999766311 1111111100000 11111111
Q ss_pred HHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH--HHHHHHhhcCCcEEEEeC
Q psy4974 240 VLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ--QVQSLLNQLKFCQYYQFS 317 (345)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~--~~~~~~~~~~~~~~~~~~ 317 (345)
+...+.... .. ............+..+. |+++++|++|.+++.. ..+.+.+...++++++++
T Consensus 214 ~~~~~~~~~--~~-------------~~~~~~~p~~~~l~~~~-P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~ 277 (311)
T 2c7b_A 214 FGRQYLKRP--EE-------------AYDFKASPLLADLGGLP-PALVVTAEYDPLRDEGELYAYKMKASGSRAVAVRFA 277 (311)
T ss_dssp HHHHHCSST--TG-------------GGSTTTCGGGSCCTTCC-CEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEET
T ss_pred HHHHhCCCC--cc-------------ccCcccCcccccccCCC-cceEEEcCCCCchHHHHHHHHHHHHCCCCEEEEEeC
Confidence 111111110 00 00000111122344444 9999999999998743 224445555678999999
Q ss_pred CCCCccc-----ccChHHHHHHHHHHHHhhcc
Q psy4974 318 SGGHSCH-----IKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 318 ~~gH~~~-----~~~~~~~~~~i~~fl~~~~k 344 (345)
+++|.+. .++++++.+.+.+||++..+
T Consensus 278 g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 278 GMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp TCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred CCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 9999876 35668899999999987643
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-22 Score=192.01 Aligned_cols=225 Identities=12% Similarity=0.075 Sum_probs=151.8
Q ss_pred cCceEEEEEcCC-----CCceEEEEcCcCCC--chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC--
Q psy4974 80 KGCDIRFIKYGS-----GAQVLFFTYGVLGE--IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP-- 150 (345)
Q Consensus 80 ~g~~l~~~~~g~-----~~p~vv~lHG~~~~--~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~-- 150 (345)
+|..+++....+ ..|+||++||++++ . ..|..+++.|+++||.|+++|+|| +.++|.+..
T Consensus 342 ~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~rG----------~~~~G~s~~~~ 410 (582)
T 3o4h_A 342 DGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDS-DSWDTFAASLAAAGFHVVMPNYRG----------STGYGEEWRLK 410 (582)
T ss_dssp TSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCC-SSCCHHHHHHHHTTCEEEEECCTT----------CSSSCHHHHHT
T ss_pred CCCEEEEEEEcCCCCCCCCcEEEEECCCcccccc-cccCHHHHHHHhCCCEEEEeccCC----------CCCCchhHHhh
Confidence 777777665421 34799999998765 4 778889999999999999999999 222333311
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS 230 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 230 (345)
....+ ....+++..+.+..+++....++++|+|||+||.+|+.+|.++|++++++|+++|........ .
T Consensus 411 ~~~~~-~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~----~------ 479 (582)
T 3o4h_A 411 IIGDP-CGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMY----E------ 479 (582)
T ss_dssp TTTCT-TTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHH----H------
T ss_pred hhhhc-ccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHh----h------
Confidence 11111 122344444444455554344599999999999999999999999999999999865421100 0
Q ss_pred CCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC
Q psy4974 231 NWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF 310 (345)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~ 310 (345)
.............+... ...+... .....+.++++|+|+++|++|.++|.+.++.+.+.++.
T Consensus 480 ~~~~~~~~~~~~~~~~~---------------~~~~~~~---sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~ 541 (582)
T 3o4h_A 480 LSDAAFRNFIEQLTGGS---------------REIMRSR---SPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLA 541 (582)
T ss_dssp TCCHHHHHHHHHHTTTC---------------HHHHHHT---CGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHcCcC---------------HHHHHhc---CHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHh
Confidence 00000000111111100 0011111 12344567789999999999999999999998887753
Q ss_pred ----cEEEEeCCCCCccc-ccChHHHHHHHHHHHHhhcc
Q psy4974 311 ----CQYYQFSSGGHSCH-IKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 311 ----~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~k 344 (345)
+++++++++||.++ .++++++.+.+.+||+++.+
T Consensus 542 ~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~l~ 580 (582)
T 3o4h_A 542 RGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQRE 580 (582)
T ss_dssp TTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHcC
Confidence 79999999999987 57788999999999988754
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-21 Score=163.76 Aligned_cols=191 Identities=12% Similarity=0.104 Sum_probs=131.9
Q ss_pred CCCCceEEEEcCcCCCchhhHHHHHHhhCCC-----CeEEEEeCCCCchhhhccCCccC------CCCCCCCCCCCCCCc
Q psy4974 90 GSGAQVLFFTYGVLGEIRNSFKKQLTAFDPK-----LFTSIFWDPPGNVVLYLLGKTCS------GYGQSLPKGRSFVPF 158 (345)
Q Consensus 90 g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~-----G~~vi~~D~~G~~~~~~~g~~~~------~~G~s~~~~~~~~~~ 158 (345)
++..|+||++||++++. ..|..++..|... |+.|+++|.|++......|.... +++.+. .. ..
T Consensus 20 ~~~~p~vv~lHG~g~~~-~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~----~~-~~ 93 (239)
T 3u0v_A 20 GRHSASLIFLHGSGDSG-QGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDC----PE-HL 93 (239)
T ss_dssp SCCCEEEEEECCTTCCH-HHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSS----CC-CH
T ss_pred CCCCcEEEEEecCCCch-hhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCccc----cc-ch
Confidence 34558999999999995 8898888887654 69999999886221111111100 111111 11 23
Q ss_pred cchHHHHHHHHHHHHH-----hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCC
Q psy4974 159 QYIEEDVDIAYELLKL-----LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWS 233 (345)
Q Consensus 159 ~~~~~~~~~~~~~l~~-----~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (345)
..+++.++++..+++. ++.++++|+|||+||.+|+.+|.++|++++++|++++...........
T Consensus 94 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~----------- 162 (239)
T 3u0v_A 94 ESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQA----------- 162 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHHHHH-----------
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHHHHH-----------
Confidence 3566777788888776 255799999999999999999999999999999999876532111000
Q ss_pred hhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCC-EEEEEeCCCCCCChHHHHHHHhhcC---
Q psy4974 234 PMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVP-VLVFHSADDVMVSTQQVQSLLNQLK--- 309 (345)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vl~i~G~~D~~v~~~~~~~~~~~~~--- 309 (345)
. . .....+| +++++|++|.++|.+.++.+.+.++
T Consensus 163 --------------------------------~--------~--~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~ 200 (239)
T 3u0v_A 163 --------------------------------L--------Q--KSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLG 200 (239)
T ss_dssp --------------------------------H--------H--HCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTT
T ss_pred --------------------------------H--------H--hhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcC
Confidence 0 0 1123567 9999999999999988888777764
Q ss_pred -CcEEEEeCCCCCcccccChHHHHHHHHHHH
Q psy4974 310 -FCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 310 -~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 339 (345)
++++.+++++||.+..+..+.+.+.+.++|
T Consensus 201 ~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 231 (239)
T 3u0v_A 201 VTTKFHSFPNVYHELSKTELDILKLWILTKL 231 (239)
T ss_dssp CCEEEEEETTCCSSCCHHHHHHHHHHHHHHC
T ss_pred CcEEEEEeCCCCCcCCHHHHHHHHHHHHHhC
Confidence 689999999999987444444444444443
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-21 Score=159.71 Aligned_cols=183 Identities=14% Similarity=0.147 Sum_probs=126.5
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
+.| ||++||++++. ..|..+++.|. .|+.|+++|.|+...-...-....++|.+... .+ +...+.+.++++.++
T Consensus 16 ~~p-vv~lHG~g~~~-~~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~--~~-~~~~~~~~~~~~~~~ 89 (209)
T 3og9_A 16 LAP-LLLLHSTGGDE-HQLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKE--NF-DLESLDEETDWLTDE 89 (209)
T ss_dssp SCC-EEEECCTTCCT-TTTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGG--GB-CHHHHHHHHHHHHHH
T ss_pred CCC-EEEEeCCCCCH-HHHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccC--CC-CHHHHHHHHHHHHHH
Confidence 346 99999999995 89999999998 46999999944210000000000115554322 11 233444555555555
Q ss_pred H----HHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcc
Q psy4974 172 L----KLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYD 245 (345)
Q Consensus 172 l----~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
+ +..++ ++++++|||+||.+|+.+|.++|++++++|++++......
T Consensus 90 ~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~---------------------------- 141 (209)
T 3og9_A 90 VSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF---------------------------- 141 (209)
T ss_dssp HHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC----------------------------
T ss_pred HHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc----------------------------
Confidence 4 44455 6999999999999999999999999999999998644210
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEEEeCCCCC
Q psy4974 246 NDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYYQFSSGGH 321 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~~~gH 321 (345)
.......++|+++++|++|.++|.+.++.+.+.++ .+++.+++ +||
T Consensus 142 -----------------------------~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH 191 (209)
T 3og9_A 142 -----------------------------EQTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGH 191 (209)
T ss_dssp -----------------------------CCCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-STT
T ss_pred -----------------------------cccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC-CCC
Confidence 01123467899999999999999988888877764 35777787 899
Q ss_pred cccccChHHHHHHHHHHHHhh
Q psy4974 322 SCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 322 ~~~~~~~~~~~~~i~~fl~~~ 342 (345)
.+. .+..+.+.+||++.
T Consensus 192 ~~~----~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 192 QLT----QEEVLAAKKWLTET 208 (209)
T ss_dssp SCC----HHHHHHHHHHHHHH
T ss_pred cCC----HHHHHHHHHHHHhh
Confidence 874 33456778888764
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-20 Score=167.42 Aligned_cols=229 Identities=13% Similarity=0.012 Sum_probs=143.4
Q ss_pred eeeEEEcCceEEEEEcCC-CCce-EEEEcCcC---CCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS-GAQV-LFFTYGVL---GEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQ 147 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~-~~p~-vv~lHG~~---~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~ 147 (345)
...+.++|..+ |...+. ..|+ ||++||++ ++ ...|..++..|+.. ||.|+++|+|+ .+.
T Consensus 60 ~~~~~~~g~~~-~~p~~~~~~~~~vv~~HGgg~~~g~-~~~~~~~~~~la~~~g~~v~~~dyr~-------------~~~ 124 (322)
T 3k6k_A 60 LTLTDLGGVPC-IRQATDGAGAAHILYFHGGGYISGS-PSTHLVLTTQLAKQSSATLWSLDYRL-------------APE 124 (322)
T ss_dssp EEEEEETTEEE-EEEECTTCCSCEEEEECCSTTTSCC-HHHHHHHHHHHHHHHTCEEEEECCCC-------------TTT
T ss_pred EEEEEECCEeE-EecCCCCCCCeEEEEEcCCcccCCC-hHHHHHHHHHHHHhcCCEEEEeeCCC-------------CCC
Confidence 45566789888 665553 3356 99999976 66 48888898888865 89999999999 765
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHH-hCCccEEEEEeChhHHHHHHHHHhCCcc----cceeeEeccCCCCCchhHHH
Q psy4974 148 SLPKGRSFVPFQYIEEDVDIAYELLKL-LGVCKVSLFGWCDGGHLSFVFSMKYPHM----VHKLVIWGTKSFLTIDNVRV 222 (345)
Q Consensus 148 s~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~i~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~ 222 (345)
+..+ ..+++..+.+..+++. ++.++++|+|||+||.+|+.+|...+++ ++++|+++|...........
T Consensus 125 ~~~~-------~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~ 197 (322)
T 3k6k_A 125 NPFP-------AAVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSN 197 (322)
T ss_dssp SCTT-------HHHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHH
T ss_pred CCCc-------hHHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccch
Confidence 5221 1344444444455554 4567999999999999999999988765 99999999977644322221
Q ss_pred HHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHH
Q psy4974 223 FEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQ 302 (345)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~ 302 (345)
.....................+.... .. ...........+ ....|+|+++|++|.+++ .++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------------~~~~~sp~~~~~-~~~pP~li~~G~~D~~~~--~~~ 258 (322)
T 3k6k_A 198 SNLADRDFLAEPDTLGEMSELYVGGE-DR---------------KNPLISPVYADL-SGLPEMLIHVGSEEALLS--DST 258 (322)
T ss_dssp HHTGGGCSSSCHHHHHHHHHHHHTTS-CT---------------TCTTTCGGGSCC-TTCCCEEEEEESSCTTHH--HHH
T ss_pred hhccCCCCcCCHHHHHHHHHHhcCCC-CC---------------CCCcCCcccccc-cCCCcEEEEECCcCccHH--HHH
Confidence 11111101111111111111110000 00 000000111112 223699999999998743 444
Q ss_pred HHHhhc----CCcEEEEeCCCCCcccc-----cChHHHHHHHHHHHHhhc
Q psy4974 303 SLLNQL----KFCQYYQFSSGGHSCHI-----KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 303 ~~~~~~----~~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~~ 343 (345)
.+++.+ .+++++++++++|.+.. ++++++.+.+.+||++..
T Consensus 259 ~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (322)
T 3k6k_A 259 TLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARI 308 (322)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHH
Confidence 444443 46799999999998764 446789999999998764
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=171.41 Aligned_cols=215 Identities=12% Similarity=-0.051 Sum_probs=139.4
Q ss_pred CCceEEEEcCcC---CCchhhHHHHHHhhC-CCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 92 GAQVLFFTYGVL---GEIRNSFKKQLTAFD-PKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 92 ~~p~vv~lHG~~---~~~~~~~~~~~~~L~-~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
+.|+||++||++ ++. ..|..++..|+ +.||.|+++|+|| +|.+..+. ...+..+.+++
T Consensus 78 ~~p~vv~~HGgg~~~g~~-~~~~~~~~~la~~~g~~Vv~~dyrg-------------~g~~~~p~----~~~d~~~~~~~ 139 (311)
T 1jji_A 78 DSPVLVYYHGGGFVICSI-ESHDALCRRIARLSNSTVVSVDYRL-------------APEHKFPA----AVYDCYDATKW 139 (311)
T ss_dssp SEEEEEEECCSTTTSCCT-GGGHHHHHHHHHHHTSEEEEEECCC-------------TTTSCTTH----HHHHHHHHHHH
T ss_pred CceEEEEECCcccccCCh-hHhHHHHHHHHHHhCCEEEEecCCC-------------CCCCCCCC----cHHHHHHHHHH
Confidence 347999999998 774 88999999998 5689999999999 99885442 22345555666
Q ss_pred HHHHHHHhCCc--cEEEEEeChhHHHHHHHHHhCCcc----cceeeEeccCCCCCchhHHHHHHhHhccC-CChhhHHHH
Q psy4974 168 AYELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYPHM----VHKLVIWGTKSFLTIDNVRVFEGMRRLSN-WSPMARSEV 240 (345)
Q Consensus 168 ~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 240 (345)
+.+.++.++++ +++|+|||+||.+|+.+|.+++++ ++++|+++|............. ...... +.......+
T Consensus 140 l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 218 (311)
T 1jji_A 140 VAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLE-FGEGLWILDQKIMSWF 218 (311)
T ss_dssp HHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHH-TSSSCSSCCHHHHHHH
T ss_pred HHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCccHHH-hcCCCccCCHHHHHHH
Confidence 66666677766 899999999999999999988765 9999999997664322211111 000000 111111111
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH--HHHHHHhhcCCcEEEEeCC
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ--QVQSLLNQLKFCQYYQFSS 318 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~--~~~~~~~~~~~~~~~~~~~ 318 (345)
...+.... .. . ...........+..+ .|+++++|++|.+++.. ..+.+.+...+++++++++
T Consensus 219 ~~~~~~~~--~~-~------------~~~~~~p~~~~l~~~-~P~li~~G~~D~l~~~~~~~~~~l~~~g~~~~~~~~~g 282 (311)
T 1jji_A 219 SEQYFSRE--ED-K------------FNPLASVIFADLENL-PPALIITAEYDPLRDEGEVFGQMLRRAGVEASIVRYRG 282 (311)
T ss_dssp HHHHCSSG--GG-G------------GCTTTSGGGSCCTTC-CCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHhCCCC--cc-C------------CCcccCcccccccCC-ChheEEEcCcCcchHHHHHHHHHHHHcCCCEEEEEECC
Confidence 11111110 00 0 000000111233333 49999999999988632 3455555556789999999
Q ss_pred CCCccccc-----ChHHHHHHHHHHHHh
Q psy4974 319 GGHSCHIK-----HGQVFNEISRNFILE 341 (345)
Q Consensus 319 ~gH~~~~~-----~~~~~~~~i~~fl~~ 341 (345)
++|.+... ..+++.+.+.+||++
T Consensus 283 ~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 283 VLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp EETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred CCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 99987653 457888999999975
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.1e-22 Score=181.41 Aligned_cols=218 Identities=13% Similarity=0.074 Sum_probs=132.9
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
.|+||++||++++. ..+ ++..|+++||.|+++|+|| +|.+......+ ..++..+.+..+.
T Consensus 158 ~P~Vv~~hG~~~~~-~~~--~a~~La~~Gy~V~a~D~rG-------------~g~~~~~~~~~----~~~d~~~~~~~l~ 217 (422)
T 3k2i_A 158 FPGIIDIFGIGGGL-LEY--RASLLAGHGFATLALAYYN-------------FEDLPNNMDNI----SLEYFEEAVCYML 217 (422)
T ss_dssp BCEEEEECCTTCSC-CCH--HHHHHHTTTCEEEEEECSS-------------STTSCSSCSCE----ETHHHHHHHHHHH
T ss_pred cCEEEEEcCCCcch-hHH--HHHHHHhCCCEEEEEccCC-------------CCCCCCCcccC----CHHHHHHHHHHHH
Confidence 37999999997763 333 4778989999999999999 98875544333 3444444444443
Q ss_pred HHh--CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCch
Q psy4974 173 KLL--GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNY 250 (345)
Q Consensus 173 ~~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
+.. +.++++|+||||||.+|+.+|.++|+ ++++|++++........... .. ............ . .........
T Consensus 218 ~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-~-~~~~~~~~~ 292 (422)
T 3k2i_A 218 QHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINY-KH-SSIPPLGYDLRR-I-KVAFSGLVD 292 (422)
T ss_dssp TSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEE-TT-EEECCCCBCGGG-C-EECTTSCEE
T ss_pred hCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhh-cC-CcCCCcccchhh-c-ccCcchhHH
Confidence 332 34699999999999999999999997 99999998865322110000 00 000000000000 0 000000000
Q ss_pred hhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHH-HHHHhhcC-----CcEEEEeCCCCCcc-
Q psy4974 251 ITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQV-QSLLNQLK-----FCQYYQFSSGGHSC- 323 (345)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~-~~~~~~~~-----~~~~~~~~~~gH~~- 323 (345)
....+... ...........+.++++|+|+++|++|.++|.+.. +.+.+.++ ++++++++++||.+
T Consensus 293 ~~~~~~~~--------~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~ 364 (422)
T 3k2i_A 293 IVDIRNAL--------VGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIE 364 (422)
T ss_dssp CTTCBCCC--------TTGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCC
T ss_pred HHHHHhhh--------hhcccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEEC
Confidence 00000000 00000111223567899999999999999997744 45555442 38999999999997
Q ss_pred ---------------------------cccChHHHHHHHHHHHHhhc
Q psy4974 324 ---------------------------HIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 324 ---------------------------~~~~~~~~~~~i~~fl~~~~ 343 (345)
+.+.++++.+.+.+||+++.
T Consensus 365 ~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L 411 (422)
T 3k2i_A 365 PPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHL 411 (422)
T ss_dssp STTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhc
Confidence 33557788999999998764
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.5e-21 Score=171.38 Aligned_cols=226 Identities=12% Similarity=0.061 Sum_probs=139.3
Q ss_pred EcCceEEEEEc---C--CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC-
Q psy4974 79 IKGCDIRFIKY---G--SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG- 152 (345)
Q Consensus 79 ~~g~~l~~~~~---g--~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~- 152 (345)
.+|..+.+... + ...|+||++||++++. ..|. ....|.+.||.|+++|+|| +|.|....
T Consensus 76 ~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~-~~~~-~~~~l~~~G~~v~~~d~rG-------------~g~s~~~~~ 140 (337)
T 1vlq_A 76 YRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGR-GFPH-DWLFWPSMGYICFVMDTRG-------------QGSGWLKGD 140 (337)
T ss_dssp GGGCEEEEEEEEECCSCSSEEEEEECCCTTCCC-CCGG-GGCHHHHTTCEEEEECCTT-------------CCCSSSCCC
T ss_pred CCCCEEEEEEEecCCCCCCccEEEEEcCCCCCC-CCch-hhcchhhCCCEEEEecCCC-------------CCCcccCCC
Confidence 36777776543 2 2237899999998873 4433 3345666799999999999 88553221
Q ss_pred -CCC-----------------C--CccchHHHHHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCccccee
Q psy4974 153 -RSF-----------------V--PFQYIEEDVDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKL 206 (345)
Q Consensus 153 -~~~-----------------~--~~~~~~~~~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~l 206 (345)
..| . ....+...++|+.++++.+ +.++++++|||+||.+|+.+|..+| +++++
T Consensus 141 ~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~ 219 (337)
T 1vlq_A 141 TPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKAL 219 (337)
T ss_dssp CCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEE
T ss_pred CcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEE
Confidence 000 0 0112345566666666665 2348999999999999999999998 59999
Q ss_pred eEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEE
Q psy4974 207 VIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVL 286 (345)
Q Consensus 207 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 286 (345)
|+.+|........ . ....... .......+....... . ..+......+....+.++++|+|
T Consensus 220 vl~~p~~~~~~~~---~----~~~~~~~--~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~~~~~i~~P~l 279 (337)
T 1vlq_A 220 LCDVPFLCHFRRA---V----QLVDTHP--YAEITNFLKTHRDKE----E-------IVFRTLSYFDGVNFAARAKIPAL 279 (337)
T ss_dssp EEESCCSCCHHHH---H----HHCCCTT--HHHHHHHHHHCTTCH----H-------HHHHHHHTTCHHHHHTTCCSCEE
T ss_pred EECCCcccCHHHH---H----hcCCCcc--hHHHHHHHHhCchhH----H-------HHHHhhhhccHHHHHHHcCCCEE
Confidence 9988854421110 0 0000000 000111111110001 0 11111111222334567789999
Q ss_pred EEEeCCCCCCChHHHHHHHhhcC-CcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 287 VFHSADDVMVSTQQVQSLLNQLK-FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 287 ~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+++|++|.++|++....+.+.++ ++++++++++||.... ++..+.+.+||.+..
T Consensus 280 ii~G~~D~~~p~~~~~~~~~~l~~~~~~~~~~~~gH~~~~---~~~~~~~~~fl~~~l 334 (337)
T 1vlq_A 280 FSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGG---SFQAVEQVKFLKKLF 334 (337)
T ss_dssp EEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTTH---HHHHHHHHHHHHHHH
T ss_pred EEeeCCCCCCCchhHHHHHHhcCCCcEEEEcCCCCCCCcc---hhhHHHHHHHHHHHH
Confidence 99999999999999999999987 4889999999999642 344566666766543
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-21 Score=166.34 Aligned_cols=203 Identities=14% Similarity=0.169 Sum_probs=137.8
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCC---eEEEEeCCCCchhhhccCCccCCCCCCCCCCC--CCC----CccchHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKL---FTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR--SFV----PFQYIEED 164 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G---~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~--~~~----~~~~~~~~ 164 (345)
+||||+||++++ ...|..+++.|.+.| ++|+.+|+++.|...+.|.. -+.+..|.. .|. ...++++.
T Consensus 5 ~pvv~iHG~~~~-~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~---~~~~~~P~i~v~f~~n~~~~~~~~~~ 80 (250)
T 3lp5_A 5 APVIMVPGSSAS-QNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSI---AANDNEPFIVIGFANNRDGKANIDKQ 80 (250)
T ss_dssp CCEEEECCCGGG-HHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECC---CTTCSSCEEEEEESCCCCSHHHHHHH
T ss_pred CCEEEECCCCCC-HHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeec---CCCCcCCeEEEEeccCCCcccCHHHH
Confidence 589999999999 499999999998876 78998888882222221111 001111100 000 11146777
Q ss_pred HHHHHHHHHHh----CCccEEEEEeChhHHHHHHHHHhC-----CcccceeeEeccCCCCCchhHHHHHHhHhccCCChh
Q psy4974 165 VDIAYELLKLL----GVCKVSLFGWCDGGHLSFVFSMKY-----PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPM 235 (345)
Q Consensus 165 ~~~~~~~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (345)
++++.++++.+ +.++++++||||||.+++.++.++ |++|+++|+++++....... ..
T Consensus 81 a~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~----------~~---- 146 (250)
T 3lp5_A 81 AVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS----------TT---- 146 (250)
T ss_dssp HHHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC----------SS----
T ss_pred HHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc----------cc----
Confidence 88888888877 888999999999999999999887 56899999999876533210 00
Q ss_pred hHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeC----CCCCCChHHHHHHHhhcCC-
Q psy4974 236 ARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSA----DDVMVSTQQVQSLLNQLKF- 310 (345)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~----~D~~v~~~~~~~~~~~~~~- 310 (345)
.....+ ..+.. ....++. ++|+++|+|+ .|.+||.+.++.+...+++
T Consensus 147 --------------~~~~~~-------~~l~~------~~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~ 198 (250)
T 3lp5_A 147 --------------AKTSMF-------KELYR------YRTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQ 198 (250)
T ss_dssp --------------CCCHHH-------HHHHH------TGGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTT
T ss_pred --------------ccCHHH-------HHHHh------ccccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhccc
Confidence 000000 01111 1233443 7899999999 9999999988887776653
Q ss_pred -c--EEEEeC--CCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 311 -C--QYYQFS--SGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 311 -~--~~~~~~--~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
. +.+.+. +++|..+.++| ++.+.|.+||.+..
T Consensus 199 ~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~~FL~~~~ 235 (250)
T 3lp5_A 199 VKHFTEITVTGANTAHSDLPQNK-QIVSLIRQYLLAET 235 (250)
T ss_dssp SSEEEEEECTTTTBSSCCHHHHH-HHHHHHHHHTSCCC
T ss_pred ccceEEEEEeCCCCchhcchhCH-HHHHHHHHHHhccc
Confidence 2 233443 47799999988 89999999997654
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.7e-21 Score=163.25 Aligned_cols=209 Identities=14% Similarity=0.033 Sum_probs=140.2
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCe---EEEEeCCCCchhhhccCCccCCCCCCCCC-------CCCCCCccchHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLF---TSIFWDPPGNVVLYLLGKTCSGYGQSLPK-------GRSFVPFQYIEE 163 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~---~vi~~D~~G~~~~~~~g~~~~~~G~s~~~-------~~~~~~~~~~~~ 163 (345)
+||||+||++++. ..|..+++.|.++++ .+++++..+++.+.+.|.. .+.+..+ ...+ ++.+
T Consensus 4 ~pvvllHG~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~---~~~~~~~~~~~~~~~~~~----~~~~ 75 (254)
T 3ds8_A 4 IPIILIHGSGGNA-SSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKL---TKDAKRPIIKFGFEQNQA----TPDD 75 (254)
T ss_dssp CCEEEECCTTCCT-TTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCC---CTTCSSCEEEEEESSTTS----CHHH
T ss_pred CCEEEECCCCCCc-chHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEe---ccCCCCCEEEEEecCCCC----CHHH
Confidence 5899999999995 999999999988743 4667666664455555444 2222222 1222 5666
Q ss_pred HHHHH----HHHHHHhCCccEEEEEeChhHHHHHHHHHhCCc-----ccceeeEeccCCCCCchhHHHHHHhHhccCCCh
Q psy4974 164 DVDIA----YELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH-----MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSP 234 (345)
Q Consensus 164 ~~~~~----~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (345)
+++++ ..+.+.++.++++++||||||.+++.++.++|+ +|+++|+++++......... ...+.
T Consensus 76 ~a~~l~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~-------~~~~~- 147 (254)
T 3ds8_A 76 WSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDN-------GMDLS- 147 (254)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHH-------CSCTT-
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccccc-------ccccc-
Confidence 67766 455566788899999999999999999999988 89999999987654322110 00000
Q ss_pred hhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeC------CCCCCChHHHHHHHhhc
Q psy4974 235 MARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSA------DDVMVSTQQVQSLLNQL 308 (345)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~------~D~~v~~~~~~~~~~~~ 308 (345)
.. ...... ..+..+.. ....++. ++|++.|+|+ .|.+||...++.+...+
T Consensus 148 -----------~~--~~p~~~----~~~~~~~~------~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~ 203 (254)
T 3ds8_A 148 -----------FK--KLPNST----PQMDYFIK------NQTEVSP-DLEVLAIAGELSEDNPTDGIVPTISSLATRLFM 203 (254)
T ss_dssp -----------CS--SCSSCC----HHHHHHHH------TGGGSCT-TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTS
T ss_pred -----------cc--cCCcch----HHHHHHHH------HHhhCCC-CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHh
Confidence 00 000000 00011111 1223333 7899999999 99999999999988877
Q ss_pred CC----cEEEEeCC--CCCcccccChHHHHHHHHHHHHhhc
Q psy4974 309 KF----CQYYQFSS--GGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 309 ~~----~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
++ .+...+.+ ++|..+.++|+ +.+.|..||.+..
T Consensus 204 ~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~~fL~~~~ 243 (254)
T 3ds8_A 204 PGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTYWFLEKFK 243 (254)
T ss_dssp BTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHHHHHHTCC
T ss_pred hccCcceEEEEEeCCCCchhcccCCHH-HHHHHHHHHHHhc
Confidence 64 33445555 77999988885 8999999998754
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.7e-21 Score=160.83 Aligned_cols=190 Identities=13% Similarity=0.111 Sum_probs=133.8
Q ss_pred cCceEEEEEcCC---CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 80 KGCDIRFIKYGS---GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 80 ~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
++..++|....+ .+|+||++||++++. ..|..+++.|++ ||.|+++|.|+...- |.+ .++.+. ....
T Consensus 14 ~~~~l~~~~~~~~~~~~p~vv~lHG~g~~~-~~~~~~~~~l~~-~~~vv~~d~~~~~~~---g~~--~~~~~~--~~~~- 83 (223)
T 3b5e_A 14 TDLAFPYRLLGAGKESRECLFLLHGSGVDE-TTLVPLARRIAP-TATLVAARGRIPQED---GFR--WFERID--PTRF- 83 (223)
T ss_dssp CSSSSCEEEESTTSSCCCEEEEECCTTBCT-TTTHHHHHHHCT-TSEEEEECCSEEETT---EEE--SSCEEE--TTEE-
T ss_pred cCCCceEEEeCCCCCCCCEEEEEecCCCCH-HHHHHHHHhcCC-CceEEEeCCCCCcCC---ccc--cccccC--CCcc-
Confidence 455566665432 347999999999995 899999999987 799999998871000 000 000000 0001
Q ss_pred CccchHHHHHHHHHHHHHh----CC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc
Q psy4974 157 PFQYIEEDVDIAYELLKLL----GV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS 230 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~----~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 230 (345)
....+.+.++++.++++.+ ++ ++++++|||+||.+|+.+|.++|++++++|++++......
T Consensus 84 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------- 150 (223)
T 3b5e_A 84 EQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH------------- 150 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS-------------
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc-------------
Confidence 2234555566666665544 44 6899999999999999999999999999999998654210
Q ss_pred CCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-
Q psy4974 231 NWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK- 309 (345)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~- 309 (345)
......+++|+++++|++|.++|.+.++ +.+.++
T Consensus 151 --------------------------------------------~~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~ 185 (223)
T 3b5e_A 151 --------------------------------------------VPATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSR 185 (223)
T ss_dssp --------------------------------------------CCCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHH
T ss_pred --------------------------------------------cccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHH
Confidence 0012346789999999999999998888 877765
Q ss_pred ---CcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 310 ---FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 310 ---~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
++++++++ +||.+..+. .+.+.+||++.
T Consensus 186 ~g~~~~~~~~~-~gH~~~~~~----~~~i~~~l~~~ 216 (223)
T 3b5e_A 186 HGAEVDARIIP-SGHDIGDPD----AAIVRQWLAGP 216 (223)
T ss_dssp TTCEEEEEEES-CCSCCCHHH----HHHHHHHHHCC
T ss_pred CCCceEEEEec-CCCCcCHHH----HHHHHHHHHhh
Confidence 57899999 999986543 35677787654
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.5e-21 Score=158.89 Aligned_cols=179 Identities=11% Similarity=0.116 Sum_probs=125.2
Q ss_pred CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC---CCCCCCccchHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK---GRSFVPFQYIEEDVDI 167 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~---~~~~~~~~~~~~~~~~ 167 (345)
+.+++||++||++++. ..|..+++.|...|+.|+++|.+| ++.-+.. .... +...+++..+.
T Consensus 20 ~a~~~Vv~lHG~G~~~-~~~~~l~~~l~~~~~~v~~P~~~g-------------~~w~~~~~~~~~~~-~~~~~~~~~~~ 84 (210)
T 4h0c_A 20 RAKKAVVMLHGRGGTA-ADIISLQKVLKLDEMAIYAPQATN-------------NSWYPYSFMAPVQQ-NQPALDSALAL 84 (210)
T ss_dssp TCSEEEEEECCTTCCH-HHHHGGGGTSSCTTEEEEEECCGG-------------GCSSSSCTTSCGGG-GTTHHHHHHHH
T ss_pred cCCcEEEEEeCCCCCH-HHHHHHHHHhCCCCeEEEeecCCC-------------CCccccccCCCccc-chHHHHHHHHH
Confidence 3457999999999995 889999999998899999999998 5421111 1000 11123333333
Q ss_pred HHHH---HHHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHH
Q psy4974 168 AYEL---LKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLK 242 (345)
Q Consensus 168 ~~~~---l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (345)
+..+ +...++ ++++++|+|+||.+|+.++.++|+++.++|.+++.........
T Consensus 85 i~~~~~~~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~~---------------------- 142 (210)
T 4h0c_A 85 VGEVVAEIEAQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELAI---------------------- 142 (210)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCCG----------------------
T ss_pred HHHHHHHHHHhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhhh----------------------
Confidence 3333 334443 5899999999999999999999999999999987543211000
Q ss_pred HcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEEEeCC
Q psy4974 243 AYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYYQFSS 318 (345)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~~ 318 (345)
. .......++|++++||++|+++|.+.++++.+.+. +++++++++
T Consensus 143 ----~---------------------------~~~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg 191 (210)
T 4h0c_A 143 ----G---------------------------NYKGDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPG 191 (210)
T ss_dssp ----G---------------------------GCCBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEET
T ss_pred ----h---------------------------hhhhhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 0 00011235799999999999999998888776653 568899999
Q ss_pred CCCcccccChHHHHHHHHHHHHh
Q psy4974 319 GGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 319 ~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
.||.+. +++ .+.+.+||.+
T Consensus 192 ~gH~i~---~~e-l~~i~~wL~k 210 (210)
T 4h0c_A 192 RPHTIS---GDE-IQLVNNTILK 210 (210)
T ss_dssp CCSSCC---HHH-HHHHHHTTTC
T ss_pred CCCCcC---HHH-HHHHHHHHcC
Confidence 999875 344 3667888753
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4.9e-21 Score=185.56 Aligned_cols=228 Identities=13% Similarity=0.080 Sum_probs=152.9
Q ss_pred cCceEEEEEcC-----------CCCceEEEEcCcCCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCC
Q psy4974 80 KGCDIRFIKYG-----------SGAQVLFFTYGVLGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQ 147 (345)
Q Consensus 80 ~g~~l~~~~~g-----------~~~p~vv~lHG~~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~ 147 (345)
+|..+++.... .+.|+||++||++++. ...|..++..|+++||.|+++|+|| +.+||.
T Consensus 400 dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG----------~~~~G~ 469 (662)
T 3azo_A 400 DGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGG----------STGYGR 469 (662)
T ss_dssp TSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTT----------CSSSCH
T ss_pred CCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCC----------CCCccH
Confidence 77788766532 2247899999998763 1378888899999999999999999 333444
Q ss_pred CCC--CCCCCCCccchHHHHHHHHHHHHH--hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHH
Q psy4974 148 SLP--KGRSFVPFQYIEEDVDIAYELLKL--LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVF 223 (345)
Q Consensus 148 s~~--~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 223 (345)
+.. ....+ ....+++..+.+..+++. ++.++++|+|||+||.+++.++.. |++++++|+++|....... .
T Consensus 470 ~~~~~~~~~~-~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~----~ 543 (662)
T 3azo_A 470 AYRERLRGRW-GVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGW----A 543 (662)
T ss_dssp HHHHTTTTTT-TTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHH----H
T ss_pred HHHHhhcccc-ccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHH----h
Confidence 421 11222 222456667777777776 455699999999999999998886 8999999999886542110 0
Q ss_pred HHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHH
Q psy4974 224 EGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQS 303 (345)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~ 303 (345)
. ..............+... . ... ..+.. ......+.++++|+|+++|++|.++|...+++
T Consensus 544 ~-----~~~~~~~~~~~~~~~~~~---~-~~~--------~~~~~---~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~ 603 (662)
T 3azo_A 544 D-----GGTHDFESRYLDFLIGSF---E-EFP--------ERYRD---RAPLTRADRVRVPFLLLQGLEDPVCPPEQCDR 603 (662)
T ss_dssp T-----TCSCGGGTTHHHHHTCCT---T-TCH--------HHHHH---TCGGGGGGGCCSCEEEEEETTCSSSCTHHHHH
T ss_pred c-----ccccchhhHhHHHHhCCC---c-cch--------hHHHh---hChHhHhccCCCCEEEEeeCCCCCCCHHHHHH
Confidence 0 000000000111111111 0 000 00111 11234456778999999999999999999999
Q ss_pred HHhhcCCc----EEEEeCCCCCcccc-cChHHHHHHHHHHHHhhc
Q psy4974 304 LLNQLKFC----QYYQFSSGGHSCHI-KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 304 ~~~~~~~~----~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~ 343 (345)
+.+.++.. ++++++++||.+.. +++.++.+.+.+||.+..
T Consensus 604 ~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 648 (662)
T 3azo_A 604 FLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVF 648 (662)
T ss_dssp HHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHh
Confidence 99888654 89999999998743 677899999999998764
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.4e-21 Score=189.07 Aligned_cols=217 Identities=12% Similarity=0.130 Sum_probs=146.6
Q ss_pred cC-ceEEEEEcCC-------CCceEEEEcCcCCCch--hhHHH----HHHhhCCCCeEEEEeCCCCchhhhccCCccCCC
Q psy4974 80 KG-CDIRFIKYGS-------GAQVLFFTYGVLGEIR--NSFKK----QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGY 145 (345)
Q Consensus 80 ~g-~~l~~~~~g~-------~~p~vv~lHG~~~~~~--~~~~~----~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~ 145 (345)
+| ..+++....+ +.|+||++||++++.. ..|.. +++.|+++||.|+++|+|| +
T Consensus 464 ~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG-------------~ 530 (706)
T 2z3z_A 464 DGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRG-------------S 530 (706)
T ss_dssp TSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTT-------------C
T ss_pred CCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCC-------------C
Confidence 67 7888876532 2278999999876621 34654 5788888899999999999 9
Q ss_pred CCCCCCCCCCCCccch-HHHHHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch
Q psy4974 146 GQSLPKGRSFVPFQYI-EEDVDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID 218 (345)
Q Consensus 146 G~s~~~~~~~~~~~~~-~~~~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 218 (345)
|.+..+.... ....+ ....+|+.+.++.+ +.++++|+|||+||.+|+.+|.++|++++++|+++|.......
T Consensus 531 g~s~~~~~~~-~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~ 609 (706)
T 2z3z_A 531 ANRGAAFEQV-IHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRY 609 (706)
T ss_dssp SSSCHHHHHT-TTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGS
T ss_pred cccchhHHHH-HhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHH
Confidence 9875321100 00011 12234444444443 2458999999999999999999999999999999987642211
Q ss_pred hHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCCh
Q psy4974 219 NVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST 298 (345)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~ 298 (345)
.. ... ...+... ..... .+.. ......+.++++|+|+++|++|.++|.
T Consensus 610 ~~--------------~~~---~~~~~~~----~~~~~--------~~~~---~~~~~~~~~i~~P~lii~G~~D~~v~~ 657 (706)
T 2z3z_A 610 AI--------------MYG---ERYFDAP----QENPE--------GYDA---ANLLKRAGDLKGRLMLIHGAIDPVVVW 657 (706)
T ss_dssp BH--------------HHH---HHHHCCT----TTCHH--------HHHH---HCGGGGGGGCCSEEEEEEETTCSSSCT
T ss_pred Hh--------------hhh---hhhcCCc----ccChh--------hhhh---CCHhHhHHhCCCCEEEEeeCCCCCCCH
Confidence 00 000 0111110 00000 0111 122344567789999999999999999
Q ss_pred HHHHHHHhhcC----CcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 299 QQVQSLLNQLK----FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 299 ~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+.++++.+.++ +.++.+++++||.++.++++++.+.+.+||+++
T Consensus 658 ~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 705 (706)
T 2z3z_A 658 QHSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYETITRYFTDH 705 (706)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHHHHHHHh
Confidence 98888887774 359999999999998888999999999999875
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.6e-21 Score=163.00 Aligned_cols=215 Identities=15% Similarity=0.045 Sum_probs=131.6
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCe--EEEEeCCCCchhhhccCCccCCCCCCCCCCC--CCC--CccchHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLF--TSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR--SFV--PFQYIEEDVD 166 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~--~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~--~~~--~~~~~~~~~~ 166 (345)
.+||||+||++++. ..|..+++.|.+.|+ +|+.+|.++.|.+.+.|+. ...+..|-. .|. ...++.+.++
T Consensus 6 ~~pvvliHG~~~~~-~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~---~~~~~~P~i~v~f~~n~~~~~~~~~~ 81 (249)
T 3fle_A 6 TTATLFLHGYGGSE-RSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKL---SEDAANPIVKVEFKDNKNGNFKENAY 81 (249)
T ss_dssp CEEEEEECCTTCCG-GGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCC---C--CCSCEEEEEESSTTCCCHHHHHH
T ss_pred CCcEEEECCCCCCh-hHHHHHHHHHHHcCCCceEEEEEECCCCCEEEcccc---ccccCCCeEEEEcCCCCCccHHHHHH
Confidence 46999999999995 999999999999885 6999999981111111111 000111100 000 0113444444
Q ss_pred HHHHHH----HHhCCccEEEEEeChhHHHHHHHHHhCCc-----ccceeeEeccCCCCCchhHHHHHHhHhccCCChhhH
Q psy4974 167 IAYELL----KLLGVCKVSLFGWCDGGHLSFVFSMKYPH-----MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMAR 237 (345)
Q Consensus 167 ~~~~~l----~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (345)
++.+++ +.++.++++++||||||.+++.++.++|+ +|+++|+++++.......... .....+...
T Consensus 82 ~l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~-~~~~~~~~~----- 155 (249)
T 3fle_A 82 WIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNEN-VNEIIVDKQ----- 155 (249)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSC-TTTSCBCTT-----
T ss_pred HHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCC-cchhhhccc-----
Confidence 444444 44588899999999999999999999873 799999999865432110000 000000000
Q ss_pred HHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeC------CCCCCChHHHHHHHhhcCC-
Q psy4974 238 SEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSA------DDVMVSTQQVQSLLNQLKF- 310 (345)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~------~D~~v~~~~~~~~~~~~~~- 310 (345)
. .+......+. . .. .....++..++|||.|+|+ .|.+||...++.+...+++
T Consensus 156 -------g-~p~~~~~~~~-------~----l~--~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~ 214 (249)
T 3fle_A 156 -------G-KPSRMNAAYR-------Q----LL--SLYKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGS 214 (249)
T ss_dssp -------C-CBSSCCHHHH-------H----TG--GGHHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTC
T ss_pred -------C-CCcccCHHHH-------H----HH--HHHhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhC
Confidence 0 0000000110 0 00 0123344468899999998 6999999998877666653
Q ss_pred ---cEEEEeCC--CCCcccccChHHHHHHHHHHH
Q psy4974 311 ---CQYYQFSS--GGHSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 311 ---~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl 339 (345)
.+.+.+.| +.|....+++ ++.+.|.+||
T Consensus 215 ~~~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~~FL 247 (249)
T 3fle_A 215 TKSYQEMKFKGAKAQHSQLHENK-DVANEIIQFL 247 (249)
T ss_dssp SSEEEEEEEESGGGSTGGGGGCH-HHHHHHHHHH
T ss_pred CCceEEEEEeCCCCchhccccCH-HHHHHHHHHh
Confidence 24456655 8999988866 8889999997
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-21 Score=189.24 Aligned_cols=219 Identities=12% Similarity=0.094 Sum_probs=148.7
Q ss_pred cC-ceEEEEEcCC-------CCceEEEEcCcCCCc--hhhHH-----HHHHhhCCCCeEEEEeCCCCchhhhccCCccCC
Q psy4974 80 KG-CDIRFIKYGS-------GAQVLFFTYGVLGEI--RNSFK-----KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSG 144 (345)
Q Consensus 80 ~g-~~l~~~~~g~-------~~p~vv~lHG~~~~~--~~~~~-----~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~ 144 (345)
+| ..+++....+ ..|+||++||++++. ...|. .+++.|+++||.|+++|+||
T Consensus 496 ~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG------------- 562 (741)
T 2ecf_A 496 DGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRG------------- 562 (741)
T ss_dssp TSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTT-------------
T ss_pred CCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCC-------------
Confidence 78 8898887632 237899999988762 13454 67888888899999999999
Q ss_pred CCCCCCCCCCCCCccch-HHHHHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc
Q psy4974 145 YGQSLPKGRSFVPFQYI-EEDVDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI 217 (345)
Q Consensus 145 ~G~s~~~~~~~~~~~~~-~~~~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 217 (345)
+|.+..+.... ....+ ...++|+.+.++.+ +.++++++|||+||.+++.+|.++|++++++|+++|......
T Consensus 563 ~g~s~~~~~~~-~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 641 (741)
T 2ecf_A 563 TPRRGRDFGGA-LYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGL 641 (741)
T ss_dssp CSSSCHHHHHT-TTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGG
T ss_pred CCCCChhhhHH-HhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhh
Confidence 99874321100 00000 11233333333333 235899999999999999999999999999999998765321
Q ss_pred hhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCC
Q psy4974 218 DNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVS 297 (345)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~ 297 (345)
... .. ....+... .... ..+.. ......+.++++|+|+++|++|.++|
T Consensus 642 ~~~--------------~~---~~~~~~~~----~~~~--------~~~~~---~~~~~~~~~i~~P~lii~G~~D~~v~ 689 (741)
T 2ecf_A 642 YDS--------------HY---TERYMDLP----ARND--------AGYRE---ARVLTHIEGLRSPLLLIHGMADDNVL 689 (741)
T ss_dssp SBH--------------HH---HHHHHCCT----GGGH--------HHHHH---HCSGGGGGGCCSCEEEEEETTCSSSC
T ss_pred hcc--------------cc---chhhcCCc----ccCh--------hhhhh---cCHHHHHhhCCCCEEEEccCCCCCCC
Confidence 100 00 00011111 0000 00111 11233456778999999999999999
Q ss_pred hHHHHHHHhhcC----CcEEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 298 TQQVQSLLNQLK----FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 298 ~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
.+.++.+.+.++ ..++++++++||.++.+.++++.+.+.+||+++.|
T Consensus 690 ~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 690 FTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAEAFLGRCLK 740 (741)
T ss_dssp THHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHHHHHHHhcC
Confidence 998888888774 35999999999999888789999999999998765
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=168.69 Aligned_cols=216 Identities=9% Similarity=-0.081 Sum_probs=131.8
Q ss_pred CceEEEEcCcCC---Cc-hhhHHHHHHhhC-CCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLG---EI-RNSFKKQLTAFD-PKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~---~~-~~~~~~~~~~L~-~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
.|+||++||++. +. ...|..++..|+ +.||.|+++|+|| .+.+..+ ..+++..+.
T Consensus 113 ~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg-------------~~~~~~~-------~~~~D~~~~ 172 (351)
T 2zsh_A 113 VPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRR-------------APENPYP-------CAYDDGWIA 172 (351)
T ss_dssp CEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCC-------------TTTSCTT-------HHHHHHHHH
T ss_pred ceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCC-------------CCCCCCc-------hhHHHHHHH
Confidence 378999999654 21 134888999998 6799999999999 7655211 123333433
Q ss_pred HHHHHHH------hCCc-cEEEEEeChhHHHHHHHHHhCCc---ccceeeEeccCCCCCchhHHHHHHhHhccCCChhhH
Q psy4974 168 AYELLKL------LGVC-KVSLFGWCDGGHLSFVFSMKYPH---MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMAR 237 (345)
Q Consensus 168 ~~~~l~~------~~~~-~i~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (345)
+..+.+. ++.+ +++|+|||+||.+|+.+|.++|+ +++++|+++|............. ............
T Consensus 173 ~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~-~~~~~~~~~~~~ 251 (351)
T 2zsh_A 173 LNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERTESEKS-LDGKYFVTVRDR 251 (351)
T ss_dssp HHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCCHHHHH-HTTTSSCCHHHH
T ss_pred HHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCChhhhh-cCCCcccCHHHH
Confidence 4333332 3456 89999999999999999999888 89999999987653322111110 000000011111
Q ss_pred HHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCC-CEEEEEeCCCCCCChH--HHHHHHhhcCCcEEE
Q psy4974 238 SEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDV-PVLVFHSADDVMVSTQ--QVQSLLNQLKFCQYY 314 (345)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvl~i~G~~D~~v~~~--~~~~~~~~~~~~~~~ 314 (345)
......+.... ..... . ...........+.++++ |+|+++|++|.+++.. ..+.+.+...+++++
T Consensus 252 ~~~~~~~~~~~-~~~~~---------~--~~~~~~~~~~~l~~i~~pP~Lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~ 319 (351)
T 2zsh_A 252 DWYWKAFLPEG-EDREH---------P--ACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLM 319 (351)
T ss_dssp HHHHHHHSCTT-CCTTS---------T--TTCTTSTTSCCCTTCCCCEEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHhCCCC-CCCCC---------c--ccCCCCCCccchhhCCCCCEEEEEcCCCcchHHHHHHHHHHHHcCCCEEEE
Confidence 11111111000 00000 0 00000011234556666 9999999999988622 233333333478999
Q ss_pred EeCCCCCcccc----cChHHHHHHHHHHHHh
Q psy4974 315 QFSSGGHSCHI----KHGQVFNEISRNFILE 341 (345)
Q Consensus 315 ~~~~~gH~~~~----~~~~~~~~~i~~fl~~ 341 (345)
+++++||.++. ++++++.+.|.+||++
T Consensus 320 ~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 320 HLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp EETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred EECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 99999999887 7899999999999975
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.86 E-value=6.5e-20 Score=157.16 Aligned_cols=198 Identities=13% Similarity=0.064 Sum_probs=124.0
Q ss_pred EEEcCceEEEEEc---C-CCCceEEEEcCcCCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 77 FSIKGCDIRFIKY---G-SGAQVLFFTYGVLGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 77 ~~~~g~~l~~~~~---g-~~~p~vv~lHG~~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
+..||.+|....+ + ...|.||++||++++. ...+..+++.|+++||.|+++|+|| ||.+...
T Consensus 36 ~~~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG-------------~G~s~~~ 102 (259)
T 4ao6_A 36 LEVDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPG-------------HGERASV 102 (259)
T ss_dssp EEETTEEEEEEEEEESSSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC--------------------
T ss_pred EeeCCeEEEEEEEeCCCCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCC-------------CCCCCCc
Confidence 4568988885543 2 2346889999998873 1456788899999999999999999 9887533
Q ss_pred CCCCC-----Cccc----------hHHHHHHHHHH----HHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccC
Q psy4974 152 GRSFV-----PFQY----------IEEDVDIAYEL----LKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTK 212 (345)
Q Consensus 152 ~~~~~-----~~~~----------~~~~~~~~~~~----l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 212 (345)
..... .... ....+.+.... ....+.+++.++|+|+||.+++.++...|+ +++.|+..+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~ 181 (259)
T 4ao6_A 103 QAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMG 181 (259)
T ss_dssp ------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCC
T ss_pred ccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEeccc
Confidence 21100 0000 11112222222 233466799999999999999999999874 6666655443
Q ss_pred CCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCC
Q psy4974 213 SFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSAD 292 (345)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~ 292 (345)
...... ........++++|+|+++|++
T Consensus 182 ~~~~~~-----------------------------------------------------~~~~~~a~~i~~P~Li~hG~~ 208 (259)
T 4ao6_A 182 VEGVNG-----------------------------------------------------EDLVRLAPQVTCPVRYLLQWD 208 (259)
T ss_dssp TTSTTH-----------------------------------------------------HHHHHHGGGCCSCEEEEEETT
T ss_pred cccccc-----------------------------------------------------cchhhhhccCCCCEEEEecCC
Confidence 221100 000122346789999999999
Q ss_pred CCCCChHHHHHHHhhcC--CcEEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 293 DVMVSTQQVQSLLNQLK--FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 293 D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
|.++|.+.++++.+.+. +.++++++ ++|... ...+..+.+.+||+++.|
T Consensus 209 D~~vp~~~~~~l~~al~~~~k~l~~~~-G~H~~~--p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 209 DELVSLQSGLELFGKLGTKQKTLHVNP-GKHSAV--PTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp CSSSCHHHHHHHHHHCCCSSEEEEEES-SCTTCC--CHHHHTHHHHHHHHHHCC
T ss_pred CCCCCHHHHHHHHHHhCCCCeEEEEeC-CCCCCc--CHHHHHHHHHHHHHHhcC
Confidence 99999999999999885 45777887 467533 124667888899998865
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-20 Score=161.65 Aligned_cols=235 Identities=13% Similarity=0.061 Sum_probs=140.2
Q ss_pred eeeEEEcCceEEEEEcC-CCCceEEEEcCcC---CCchhhH-HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYG-SGAQVLFFTYGVL---GEIRNSF-KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS 148 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g-~~~p~vv~lHG~~---~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s 148 (345)
..+...+|..++++... ...|+||++||++ ++ ...| ..+...+.+.||.|+++|+|+ ....
T Consensus 7 ~~~~~~~~~~~~~y~p~~~~~p~iv~~HGGg~~~g~-~~~~~~~~~~~l~~~g~~Vi~vdYrl-------------aPe~ 72 (274)
T 2qru_A 7 NNQTLANGATVTIYPTTTEPTNYVVYLHGGGMIYGT-KSDLPEELKELFTSNGYTVLALDYLL-------------APNT 72 (274)
T ss_dssp EEEECTTSCEEEEECCSSSSCEEEEEECCSTTTSCC-GGGCCHHHHHHHHTTTEEEEEECCCC-------------TTTS
T ss_pred ccccccCCeeEEEEcCCCCCCcEEEEEeCccccCCC-hhhchHHHHHHHHHCCCEEEEeCCCC-------------CCCC
Confidence 44444578888876653 3447899999988 55 3555 567777888899999999999 5422
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHH----hC-CccEEEEEeChhHHHHHHHHH---hCCcccceeeEeccCCCCCchhH
Q psy4974 149 LPKGRSFVPFQYIEEDVDIAYELLKL----LG-VCKVSLFGWCDGGHLSFVFSM---KYPHMVHKLVIWGTKSFLTIDNV 220 (345)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~l~~----~~-~~~i~lvGhS~Gg~ia~~~a~---~~p~~v~~lvl~~~~~~~~~~~~ 220 (345)
.+...++|+.+.++. .. .++++|+|+|+||.+|+.++. ..+.++++++++.+.........
T Consensus 73 -----------~~p~~~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~ 141 (274)
T 2qru_A 73 -----------KIDHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKE 141 (274)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGS
T ss_pred -----------CCcHHHHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCC
Confidence 233334444444433 33 679999999999999999997 35678999998877544111000
Q ss_pred HHHHHhHhccCCChhhHHHHHHHcccC---CchhhhhHHHHH--H---HHHHHHHhhCch------hh-hccCCCCCCCE
Q psy4974 221 RVFEGMRRLSNWSPMARSEVLKAYDND---VNYITGIFNQYV--D---MVNLIFKSYGRN------VY-QELLPYVDVPV 285 (345)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~---~~~~~~~~~~~~------~~-~~~l~~i~~Pv 285 (345)
... . .......... ....... .......+..+. . .+. .+...... .. ...+..+ .|+
T Consensus 142 ~~~--~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l-pP~ 213 (274)
T 2qru_A 142 PRK--L-LKQAISAKEI---AAIDQTKPVWDDPFLSRYLLYHYSIQQALLP-HFYGLPENGDWSAYALSDETLKTF-PPC 213 (274)
T ss_dssp CCC--S-CSSCCCSGGG---TTSCCSSCCSCCTTCTTHHHHHHHHHTTCHH-HHHTCCTTSCCGGGCCCHHHHHTS-CCE
T ss_pred chh--h-ccccccHHHH---hhhcccCCCCCCccccchhhhhhhhhhcchh-hccCcccccccccCCCChhhhcCC-CCE
Confidence 000 0 0000000000 0000000 000000000000 0 000 01000000 00 0123445 699
Q ss_pred EEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChH----HHHHHHHHHHHh
Q psy4974 286 LVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQ----VFNEISRNFILE 341 (345)
Q Consensus 286 l~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~ 341 (345)
++++|+.|..++...++++++.+++++++++++++|.++.+.+. ++.+.+.+||++
T Consensus 214 li~~G~~D~~~~~~~~~~l~~~~~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 214 FSTASSSDEEVPFRYSKKIGRTIPESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp EEEEETTCSSSCTHHHHHHHHHSTTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEecCCCCcCHHHHHHHHHhCCCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 99999999999988899999999999999999999998765443 557888899875
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-20 Score=165.83 Aligned_cols=213 Identities=12% Similarity=0.005 Sum_probs=130.7
Q ss_pred CceEEEEcCcC---CCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 93 AQVLFFTYGVL---GEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 93 ~p~vv~lHG~~---~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.|+||++||++ ++ ...|..++..|++. ||.|+++|+|| +|.+..+. ..++..+.+
T Consensus 90 ~p~vv~~HGGg~~~g~-~~~~~~~~~~La~~~g~~Vv~~Dyrg-------------~~~~~~p~-------~~~d~~~~~ 148 (323)
T 3ain_A 90 YGVLVYYHGGGFVLGD-IESYDPLCRAITNSCQCVTISVDYRL-------------APENKFPA-------AVVDSFDAL 148 (323)
T ss_dssp CCEEEEECCSTTTSCC-TTTTHHHHHHHHHHHTSEEEEECCCC-------------TTTSCTTH-------HHHHHHHHH
T ss_pred CcEEEEECCCccccCC-hHHHHHHHHHHHHhcCCEEEEecCCC-------------CCCCCCcc-------hHHHHHHHH
Confidence 47999999954 66 48899999999864 89999999999 88763321 222222223
Q ss_pred HHHHH---Hh-CCccEEEEEeChhHHHHHHHHHhCCccc---ceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHH
Q psy4974 169 YELLK---LL-GVCKVSLFGWCDGGHLSFVFSMKYPHMV---HKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVL 241 (345)
Q Consensus 169 ~~~l~---~~-~~~~i~lvGhS~Gg~ia~~~a~~~p~~v---~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
..+.+ .+ +.++++|+|||+||.+|+.+|.++|+++ +++|+++|........... ........+.........
T Consensus 149 ~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~ 227 (323)
T 3ain_A 149 KWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLITKSL-YDNGEGFFLTREHIDWFG 227 (323)
T ss_dssp HHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCCHHH-HHHSSSSSSCHHHHHHHH
T ss_pred HHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCCccH-HHhccCCCCCHHHHHHHH
Confidence 33333 33 4668999999999999999999988776 8999999876543221111 111011111111111111
Q ss_pred HHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCC--hHHHHHHHhhcCCcEEEEeCCC
Q psy4974 242 KAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVS--TQQVQSLLNQLKFCQYYQFSSG 319 (345)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~--~~~~~~~~~~~~~~~~~~~~~~ 319 (345)
..+.... ... ...........+..+. |+|+++|++|.+++ ....+.+.+.-.++++++++++
T Consensus 228 ~~~~~~~--~~~-------------~~~~~sp~~~~l~~l~-P~lii~G~~D~l~~~~~~~a~~l~~ag~~~~~~~~~g~ 291 (323)
T 3ain_A 228 QQYLRSF--ADL-------------LDFRFSPILADLNDLP-PALIITAEHDPLRDQGEAYANKLLQSGVQVTSVGFNNV 291 (323)
T ss_dssp HHHCSSG--GGG-------------GCTTTCGGGSCCTTCC-CEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTC
T ss_pred HHhCCCC--ccc-------------CCcccCcccCcccCCC-HHHEEECCCCccHHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 1111110 000 0000001111333333 99999999999875 2233334443346899999999
Q ss_pred CCcccc-----cChHHHHHHHHHHHHhhc
Q psy4974 320 GHSCHI-----KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 320 gH~~~~-----~~~~~~~~~i~~fl~~~~ 343 (345)
+|.++. +.++++.+.+.+||++..
T Consensus 292 ~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 320 (323)
T 3ain_A 292 IHGFVSFFPFIEQGRDAIGLIGYVLRKVF 320 (323)
T ss_dssp CTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCcCHHHHHHHHHHHHHHHHHh
Confidence 999876 456889999999998754
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.5e-21 Score=178.85 Aligned_cols=217 Identities=13% Similarity=0.071 Sum_probs=131.0
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
|+||++||++++. ..+ .+..|+++||.|+++|+|| +|.+....... .+++..+.+..+.+
T Consensus 175 P~Vv~lhG~~~~~-~~~--~a~~La~~Gy~Vla~D~rG-------------~~~~~~~~~~~----~~~d~~~a~~~l~~ 234 (446)
T 3hlk_A 175 PGIVDMFGTGGGL-LEY--RASLLAGKGFAVMALAYYN-------------YEDLPKTMETL----HLEYFEEAMNYLLS 234 (446)
T ss_dssp CEEEEECCSSCSC-CCH--HHHHHHTTTCEEEEECCSS-------------STTSCSCCSEE----EHHHHHHHHHHHHT
T ss_pred CEEEEECCCCcch-hhH--HHHHHHhCCCEEEEeccCC-------------CCCCCcchhhC----CHHHHHHHHHHHHh
Confidence 7899999998763 333 3778888999999999999 98875443322 34444444444444
Q ss_pred HhC--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchh
Q psy4974 174 LLG--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYI 251 (345)
Q Consensus 174 ~~~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (345)
..+ .++++|+||||||.+|+.+|..+|+ ++++|++++........... .. ............ ..........+
T Consensus 235 ~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~--~~~~~~~~~~~ 309 (446)
T 3hlk_A 235 HPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRY-KG-ETLPPVGVNRNR--IKVTKDGYADI 309 (446)
T ss_dssp STTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEE-TT-EEECCCCBCGGG--CEECSSSCEEC
T ss_pred CCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccc-cC-ccCCccccchhc--cccccchHHHH
Confidence 333 3699999999999999999999997 99999998865422110000 00 000000000000 00000000000
Q ss_pred hhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHH-HHHHHhhcC-----CcEEEEeCCCCCccc-
Q psy4974 252 TGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ-VQSLLNQLK-----FCQYYQFSSGGHSCH- 324 (345)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~-~~~~~~~~~-----~~~~~~~~~~gH~~~- 324 (345)
...+... ...........+.++++|+|+++|++|.++|... ++.+.+.++ ++++++++++||.+.
T Consensus 310 ~~~~~~~--------~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~~ 381 (446)
T 3hlk_A 310 VDVLNSP--------LEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEP 381 (446)
T ss_dssp TTCBCCT--------TSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCCS
T ss_pred HHHHhch--------hhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCCeECC
Confidence 0000000 0000011122356788999999999999999843 345555442 389999999999982
Q ss_pred ---------------------------ccChHHHHHHHHHHHHhhc
Q psy4974 325 ---------------------------IKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 325 ---------------------------~~~~~~~~~~i~~fl~~~~ 343 (345)
.+.++++.+.+.+||+++.
T Consensus 382 p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L 427 (446)
T 3hlk_A 382 PYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHL 427 (446)
T ss_dssp TTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhh
Confidence 2336778899999998764
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=168.61 Aligned_cols=218 Identities=11% Similarity=-0.062 Sum_probs=135.2
Q ss_pred ceEEEEcCcC---CCchh--hHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC-CCCCCccchHHHHHH
Q psy4974 94 QVLFFTYGVL---GEIRN--SFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG-RSFVPFQYIEEDVDI 167 (345)
Q Consensus 94 p~vv~lHG~~---~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~-~~~~~~~~~~~~~~~ 167 (345)
|+||++||++ ++. . .|..+...|++.||.|+++|+|| +|.++... ... ...+....+++
T Consensus 110 p~vv~iHGgg~~~g~~-~~~~~~~~~~~la~~g~~vv~~d~r~-------------~gg~~~~~~~~~-~~~D~~~~~~~ 174 (361)
T 1jkm_A 110 PGLVYTHGGGMTILTT-DNRVHRRWCTDLAAAGSVVVMVDFRN-------------AWTAEGHHPFPS-GVEDCLAAVLW 174 (361)
T ss_dssp EEEEEECCSTTTSSCS-SSHHHHHHHHHHHHTTCEEEEEECCC-------------SEETTEECCTTH-HHHHHHHHHHH
T ss_pred eEEEEEcCCccccCCC-cccchhHHHHHHHhCCCEEEEEecCC-------------CCCCCCCCCCCc-cHHHHHHHHHH
Confidence 7999999987 664 6 88888999987899999999999 86543111 111 12233333555
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHh-----CCcccceeeEeccCCCCCchhH--------HHHHHhHhccCCCh
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMK-----YPHMVHKLVIWGTKSFLTIDNV--------RVFEGMRRLSNWSP 234 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~-----~p~~v~~lvl~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 234 (345)
+.+.++.++.++++|+|||+||.+++.++.. .|++++++|+++|......... ..+... ....+..
T Consensus 175 v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 253 (361)
T 1jkm_A 175 VDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLTELPSLVEN-DGYFIEN 253 (361)
T ss_dssp HHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHHHCTHHHHT-TTSSSCH
T ss_pred HHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccccccccccccccccCcchhhc-cCcccCH
Confidence 5555666787899999999999999999988 7889999999999765411100 000000 0000111
Q ss_pred hhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCch-hhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----C
Q psy4974 235 MARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRN-VYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----K 309 (345)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~ 309 (345)
.....+...+......... ...... .....+..+. |+|+++|++|.+++ .++.+++.+ .
T Consensus 254 ~~~~~~~~~~~~~~~~~~~-------------~~~~p~~~~~~~l~~l~-P~Lii~G~~D~~~~--~~~~~~~~l~~~g~ 317 (361)
T 1jkm_A 254 GGMALLVRAYDPTGEHAED-------------PIAWPYFASEDELRGLP-PFVVAVNELDPLRD--EGIAFARRLARAGV 317 (361)
T ss_dssp HHHHHHHHHHSSSSTTTTC-------------TTTCGGGCCHHHHTTCC-CEEEEEETTCTTHH--HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCCCCC-------------cccCccccChhhHcCCC-ceEEEEcCcCcchh--hHHHHHHHHHHcCC
Confidence 1111111111110000000 000000 0122345555 99999999999887 444554444 3
Q ss_pred CcEEEEeCCCCCccc-c-----cCh-HHHHHHHHHHHHhhc
Q psy4974 310 FCQYYQFSSGGHSCH-I-----KHG-QVFNEISRNFILEEN 343 (345)
Q Consensus 310 ~~~~~~~~~~gH~~~-~-----~~~-~~~~~~i~~fl~~~~ 343 (345)
+++++++++++|.++ . +++ +++.+.+.+||++..
T Consensus 318 ~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 318 DVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp CEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 569999999999887 3 344 888999999998753
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-21 Score=171.61 Aligned_cols=218 Identities=10% Similarity=0.002 Sum_probs=129.1
Q ss_pred CceEEEEcCcCC---Cc-hhhHHHHHHhhC-CCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLG---EI-RNSFKKQLTAFD-PKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~---~~-~~~~~~~~~~L~-~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
.|+||++||++. +. ...|..++..|+ +.||.|+++|+|| ++.+..+ ..+++..+.
T Consensus 83 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg-------------~~~~~~~-------~~~~d~~~~ 142 (338)
T 2o7r_A 83 LPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRL-------------APEHRLP-------AAYDDAMEA 142 (338)
T ss_dssp EEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCC-------------TTTTCTT-------HHHHHHHHH
T ss_pred ceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCC-------------CCCCCCc-------hHHHHHHHH
Confidence 378999999873 21 134888888897 6799999999999 7655221 122222332
Q ss_pred HHHHHHH--------hCCccEEEEEeChhHHHHHHHHHhCCc--------ccceeeEeccCCCCCchhHHHHHHhHhccC
Q psy4974 168 AYELLKL--------LGVCKVSLFGWCDGGHLSFVFSMKYPH--------MVHKLVIWGTKSFLTIDNVRVFEGMRRLSN 231 (345)
Q Consensus 168 ~~~~l~~--------~~~~~i~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 231 (345)
+..+.+. ++.++++|+|||+||.+|+.+|.++|+ +++++|+++|.............. .....
T Consensus 143 ~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~-~~~~~ 221 (338)
T 2o7r_A 143 LQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRL-ANDSR 221 (338)
T ss_dssp HHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHT-TTCSS
T ss_pred HHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhcc-CCCcc
Confidence 3232221 333689999999999999999999887 899999999876533222111110 00000
Q ss_pred CChhhHHHHHHHcc-cCC----chhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH--HHHHH
Q psy4974 232 WSPMARSEVLKAYD-NDV----NYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ--QVQSL 304 (345)
Q Consensus 232 ~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~--~~~~~ 304 (345)
........+...+. ... ......... ........+..+++|+|+++|++|.+++.. ..+.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~~~P~Lvi~G~~D~~~~~~~~~~~~l 289 (338)
T 2o7r_A 222 LPTFVLDLIWELSLPMGADRDHEYCNPTAES------------EPLYSFDKIRSLGWRVMVVGCHGDPMIDRQMELAERL 289 (338)
T ss_dssp SCHHHHHHHHHHHSCTTCCTTSTTTCCC----------------CCTHHHHHHHHTCEEEEEEETTSTTHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhCCCCCCCCCcccCCCCCC------------cccccHhhhcCCCCCEEEEECCCCcchHHHHHHHHHH
Confidence 11111111111111 000 000000000 000001112235679999999999988743 24445
Q ss_pred HhhcCCcEEEEeCCCCCcccccCh---HHHHHHHHHHHHhhc
Q psy4974 305 LNQLKFCQYYQFSSGGHSCHIKHG---QVFNEISRNFILEEN 343 (345)
Q Consensus 305 ~~~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~~ 343 (345)
.+..+++++++++++||.++.+++ +++.+.|.+||+++.
T Consensus 290 ~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~ 331 (338)
T 2o7r_A 290 EKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSC 331 (338)
T ss_dssp HHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC---
T ss_pred HHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhc
Confidence 554457899999999999887666 889999999997654
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.5e-20 Score=161.86 Aligned_cols=216 Identities=7% Similarity=0.051 Sum_probs=127.0
Q ss_pred CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
.+.++|||+||++++. ..|..+++.|. ++|+++|+++ .. ...+++++++++.+
T Consensus 22 ~~~~~l~~~hg~~~~~-~~~~~~~~~L~---~~v~~~d~~~-------------~~----------~~~~~~~~a~~~~~ 74 (283)
T 3tjm_A 22 SSERPLFLVHPIEGST-TVFHSLASRLS---IPTYGLQCTR-------------AA----------PLDSIHSLAAYYID 74 (283)
T ss_dssp SSSCCEEEECCTTCCS-GGGHHHHHHCS---SCEEEECCCT-------------TS----------CCSCHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCH-HHHHHHHHhcC---ceEEEEecCC-------------CC----------CCCCHHHHHHHHHH
Confidence 3447999999999995 99999999997 8999999987 31 11267888999999
Q ss_pred HHHHhCC-ccEEEEEeChhHHHHHHHHHhC---Ccccc---eeeEeccCCCCCchh--------------H---HHHHHh
Q psy4974 171 LLKLLGV-CKVSLFGWCDGGHLSFVFSMKY---PHMVH---KLVIWGTKSFLTIDN--------------V---RVFEGM 226 (345)
Q Consensus 171 ~l~~~~~-~~i~lvGhS~Gg~ia~~~a~~~---p~~v~---~lvl~~~~~~~~~~~--------------~---~~~~~~ 226 (345)
.++.+.. ++++|+||||||.+|+.+|.+. |+++. +++++++.+...... . ..+..+
T Consensus 75 ~i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 154 (283)
T 3tjm_A 75 CIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPTYVLAYTGSYRAKLTPGCEAEAETEAICFF 154 (283)
T ss_dssp HHTTTCCSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCTTHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCchhhhhhhhhhhhccCCCCchHHHHHHHHHH
Confidence 9988864 6999999999999999999876 77888 999999865321100 0 000000
Q ss_pred -HhccCCChh-hHH-------------HHHHHcc-cCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEe
Q psy4974 227 -RRLSNWSPM-ARS-------------EVLKAYD-NDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHS 290 (345)
Q Consensus 227 -~~~~~~~~~-~~~-------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G 290 (345)
..+...... ... ....... ..........+.....+...+.....+ .. ..++++|+++++|
T Consensus 155 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~-~~~~~~Pvl~l~g 231 (283)
T 3tjm_A 155 VQQFTDMEHNRVLEALLPLKGLEERVAAAVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQY--TP-KAKYHGNVMLLRA 231 (283)
T ss_dssp HHHHSCCCHHHHHHHHTTSSSHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHC--CC-SSCBCSCEEEEEC
T ss_pred HHHhcccchhHHHHHHhcCCCHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC--CC-CCCCCCCEEEEec
Confidence 000000000 000 0000000 000011111222222222222211111 11 1478999999999
Q ss_pred CCCCCC--ChHHHHHHHhhcCC-cEEEEeCCCCCcccccChH--HHHHHHHH
Q psy4974 291 ADDVMV--STQQVQSLLNQLKF-CQYYQFSSGGHSCHIKHGQ--VFNEISRN 337 (345)
Q Consensus 291 ~~D~~v--~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~--~~~~~i~~ 337 (345)
++|... +......+.+..++ .+++.++ +||+.++++|. ++.+.|.+
T Consensus 232 ~~d~~~~~~~~~~~~w~~~~~~~~~~~~v~-ggH~~~l~~p~~~~va~~i~~ 282 (283)
T 3tjm_A 232 KTGGAYGEAAGADYNLSQVCDGKVSVHVIE-GDHATLLEGSGLESIISIIHS 282 (283)
T ss_dssp --------CCTTTTTGGGTBCSCEEEEECS-SCTTGGGSHHHHHHHHHHHHH
T ss_pred CCccccccccCcccchHhhccCceEEEEEC-CCCceeeCCchHHHHHHHHhc
Confidence 999763 33344456665553 6888887 79999998775 55555543
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-20 Score=166.77 Aligned_cols=220 Identities=15% Similarity=0.066 Sum_probs=147.8
Q ss_pred cCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 89 YGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 89 ~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.|++ |+|+|+||++++. ..|..+++.|... |.|+++|+|| +|.+... ..+++++++++
T Consensus 98 ~g~~-~~l~~lhg~~~~~-~~~~~l~~~L~~~-~~v~~~d~~g-------------~~~~~~~------~~~~~~~a~~~ 155 (329)
T 3tej_A 98 EGNG-PTLFCFHPASGFA-WQFSVLSRYLDPQ-WSIIGIQSPR-------------PNGPMQT------AANLDEVCEAH 155 (329)
T ss_dssp CCSS-CEEEEECCTTSCC-GGGGGGGGTSCTT-CEEEEECCCT-------------TTSHHHH------CSSHHHHHHHH
T ss_pred CCCC-CcEEEEeCCcccc-hHHHHHHHhcCCC-CeEEEeeCCC-------------CCCCCCC------CCCHHHHHHHH
Confidence 3444 6999999999995 9999999999665 9999999999 9876422 12678888888
Q ss_pred HHHHHHh-CCccEEEEEeChhHHHHHHHHHh---CCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhH----HHH
Q psy4974 169 YELLKLL-GVCKVSLFGWCDGGHLSFVFSMK---YPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMAR----SEV 240 (345)
Q Consensus 169 ~~~l~~~-~~~~i~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 240 (345)
.+.+... +..+++|+||||||.+|+.+|.+ +|++|.+++++++........... . ......... ...
T Consensus 156 ~~~i~~~~~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~ 230 (329)
T 3tej_A 156 LATLLEQQPHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEK---E--ANGLDPEVLAEINRER 230 (329)
T ss_dssp HHHHHHHCSSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC----------CCCCTHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccc---c--ccccChhhHHHHHHHH
Confidence 8777766 55699999999999999999999 999999999999876431100000 0 000001110 111
Q ss_pred HHHcccC-CchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCC
Q psy4974 241 LKAYDND-VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSG 319 (345)
Q Consensus 241 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~ 319 (345)
...+... .......+......+........ ......+++|++++.|++|...+......+....++.+++.++ +
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~~~~~~~~v~-g 305 (329)
T 3tej_A 231 EAFLAAQQGSTSTELFTTIEGNYADAVRLLT----TAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAELDIYRQD-C 305 (329)
T ss_dssp HHHHHTTCCCSCCHHHHHHHHHHHHHHHHHT----TCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTEEEEEEEEES-S
T ss_pred HHHHHhccccccHHHHHHHHHHHHHHHHHHh----cCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhcCCcEEEEec-C
Confidence 1111110 00111222222222222222111 1124567899999999999887766667777777788999997 8
Q ss_pred CCcccccCh--HHHHHHHHHHHH
Q psy4974 320 GHSCHIKHG--QVFNEISRNFIL 340 (345)
Q Consensus 320 gH~~~~~~~--~~~~~~i~~fl~ 340 (345)
||+.+++.| +.+.+.|.+||.
T Consensus 306 ~H~~~~~~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 306 AHVDIISPGTFEKIGPIIRATLN 328 (329)
T ss_dssp CGGGGGSTTTHHHHHHHHHHHHC
T ss_pred ChHHhCCChHHHHHHHHHHHHhc
Confidence 999888776 789999999985
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.84 E-value=5.7e-20 Score=162.66 Aligned_cols=219 Identities=13% Similarity=-0.013 Sum_probs=132.0
Q ss_pred CceEEEEcCcC---CCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 93 AQVLFFTYGVL---GEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 93 ~p~vv~lHG~~---~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.|+||++||++ ++ ...|..++..|++. ||.|+++|+|| +|.+..+. ...+..+.++++
T Consensus 79 ~p~vv~~HGgg~~~g~-~~~~~~~~~~la~~~G~~Vv~~d~rg-------------~~~~~~~~----~~~d~~~~~~~l 140 (323)
T 1lzl_A 79 VPVLLWIHGGGFAIGT-AESSDPFCVEVARELGFAVANVEYRL-------------APETTFPG----PVNDCYAALLYI 140 (323)
T ss_dssp EEEEEEECCSTTTSCC-GGGGHHHHHHHHHHHCCEEEEECCCC-------------TTTSCTTH----HHHHHHHHHHHH
T ss_pred CcEEEEECCCccccCC-hhhhHHHHHHHHHhcCcEEEEecCCC-------------CCCCCCCc----hHHHHHHHHHHH
Confidence 37999999998 77 48888888888874 99999999999 98874332 222333344444
Q ss_pred HHHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCc----ccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHH
Q psy4974 169 YELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPH----MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLK 242 (345)
Q Consensus 169 ~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (345)
.+.++.++. ++++|+|||+||.+|+.+|.++++ .++++|+++|........... ........+..........
T Consensus 141 ~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 219 (323)
T 1lzl_A 141 HAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSM-TNFVDTPLWHRPNAILSWK 219 (323)
T ss_dssp HHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSHHH-HHCSSCSSCCHHHHHHHHH
T ss_pred HhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCchhH-HHhccCCCCCHHHHHHHHH
Confidence 444455665 589999999999999999988765 399999999876543221111 1110111111111111111
Q ss_pred HcccCCchhhhhHHHHHHHHHHHHHhhC--chhhh-ccCCCCCCCEEEEEeCCCCCCC--hHHHHHHHhhcCCcEEEEeC
Q psy4974 243 AYDNDVNYITGIFNQYVDMVNLIFKSYG--RNVYQ-ELLPYVDVPVLVFHSADDVMVS--TQQVQSLLNQLKFCQYYQFS 317 (345)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~l~~i~~Pvl~i~G~~D~~v~--~~~~~~~~~~~~~~~~~~~~ 317 (345)
.+........ . ..... ..... ..+.. .+|+++++|++|.+++ ....+.+.+.-.++++++++
T Consensus 220 ~~~~~~~~~~-----------~-~~~~~~~~sp~~~~~~~~-~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~ 286 (323)
T 1lzl_A 220 YYLGESYSGP-----------E-DPDVSIYAAPSRATDLTG-LPPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFP 286 (323)
T ss_dssp HHHCTTCCCT-----------T-CSCCCTTTCGGGCSCCTT-CCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEET
T ss_pred HhCCCCcccc-----------c-ccCCCcccCcccCcccCC-CChhheEECCcCCchHHHHHHHHHHHHcCCCEEEEEeC
Confidence 1100000000 0 00000 00000 01111 2699999999999874 22333344433568999999
Q ss_pred CCCCcccc----cChHHHHHHHHHHHHhhc
Q psy4974 318 SGGHSCHI----KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 318 ~~gH~~~~----~~~~~~~~~i~~fl~~~~ 343 (345)
+++|.+.. +.++++.+.+.+||++..
T Consensus 287 g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l 316 (323)
T 1lzl_A 287 GTFHGSALVATAAVSERGAAEALTAIRRGL 316 (323)
T ss_dssp TCCTTGGGSTTSHHHHHHHHHHHHHHHHHT
T ss_pred cCccCcccCccCHHHHHHHHHHHHHHHHHh
Confidence 99997543 336789999999998764
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-20 Score=165.07 Aligned_cols=229 Identities=12% Similarity=-0.002 Sum_probs=135.3
Q ss_pred eeEEEcCceEEEEEc---C--CCCceEEEEcC---cCCCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCC
Q psy4974 75 GFFSIKGCDIRFIKY---G--SGAQVLFFTYG---VLGEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGY 145 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~---g--~~~p~vv~lHG---~~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~ 145 (345)
..+...+..+.+..+ + ...|+||++|| ++++. ..|..++..|+++ ||.|+++|+|| +
T Consensus 51 ~~i~~~~g~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~-~~~~~~~~~la~~~g~~v~~~d~rg-------------~ 116 (310)
T 2hm7_A 51 FDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGSWVVGDL-ETHDPVCRVLAKDGRAVVFSVDYRL-------------A 116 (310)
T ss_dssp EEEEETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCT-TTTHHHHHHHHHHHTSEEEEECCCC-------------T
T ss_pred EEeccCCCeEEEEEEecCCCCCCCCEEEEECCCccccCCh-hHhHHHHHHHHHhcCCEEEEeCCCC-------------C
Confidence 334443436655443 2 22379999999 66774 8899999999875 89999999999 8
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHHHHHH----hC--CccEEEEEeChhHHHHHHHHHhCCc----ccceeeEeccCCCC
Q psy4974 146 GQSLPKGRSFVPFQYIEEDVDIAYELLKL----LG--VCKVSLFGWCDGGHLSFVFSMKYPH----MVHKLVIWGTKSFL 215 (345)
Q Consensus 146 G~s~~~~~~~~~~~~~~~~~~~~~~~l~~----~~--~~~i~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~ 215 (345)
|.+..+ ...+.+.++.+++.. ++ .++++|+|||+||.+|+.+|.++|+ +++++|+++|....
T Consensus 117 ~~~~~~--------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~ 188 (310)
T 2hm7_A 117 PEHKFP--------AAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY 188 (310)
T ss_dssp TTSCTT--------HHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCC
T ss_pred CCCCCC--------ccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCC
Confidence 876322 122222222333222 23 3589999999999999999998876 69999999987654
Q ss_pred C--chhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCC
Q psy4974 216 T--IDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADD 293 (345)
Q Consensus 216 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D 293 (345)
. ..... .........+...........+.... .. .............+..+ .|+++++|++|
T Consensus 189 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------------~~~~~~~p~~~~~l~~~-~P~lii~G~~D 252 (310)
T 2hm7_A 189 DPAHPPAS-IEENAEGYLLTGGMMLWFRDQYLNSL--EE------------LTHPWFSPVLYPDLSGL-PPAYIATAQYD 252 (310)
T ss_dssp CTTSCCHH-HHHTSSSSSSCHHHHHHHHHHHCSSG--GG------------GGCTTTCGGGCSCCTTC-CCEEEEEEEEC
T ss_pred CcccCCcc-hhhcCCCCCCCHHHHHHHHHHhCCCC--Cc------------cCCccCCCCcCccccCC-CCEEEEEecCC
Confidence 3 11111 11000000111111111111111110 00 00000000011223333 39999999999
Q ss_pred CCCChHHHHHHHhhc----CCcEEEEeCCCCCcccc-----cChHHHHHHHHHHHHhhc
Q psy4974 294 VMVSTQQVQSLLNQL----KFCQYYQFSSGGHSCHI-----KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 294 ~~v~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~~ 343 (345)
.+++ ..+.+++.+ .+++++++++++|.+.. ++++++.+.+.+||++..
T Consensus 253 ~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 309 (310)
T 2hm7_A 253 PLRD--VGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 309 (310)
T ss_dssp TTHH--HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred CchH--HHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHh
Confidence 9873 344444443 35799999999996653 567889999999998754
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-19 Score=158.80 Aligned_cols=230 Identities=15% Similarity=0.118 Sum_probs=138.8
Q ss_pred eeeEEEcCceEEEEEcC--CCCceEEEEcCcC---CCchhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYG--SGAQVLFFTYGVL---GEIRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQ 147 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g--~~~p~vv~lHG~~---~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~ 147 (345)
...++.++..+++.... ...|+||++||++ ++ ...|..++..|+. .||.|+++|+|+ .+.
T Consensus 59 ~~~~~~~~i~~~~~~p~~~~~~p~vv~~HGGg~~~g~-~~~~~~~~~~la~~~g~~vv~~dyr~-------------~p~ 124 (322)
T 3fak_A 59 VEQVTVAGCAAEWVRAPGCQAGKAILYLHGGGYVMGS-INTHRSMVGEISRASQAAALLLDYRL-------------APE 124 (322)
T ss_dssp EEEEEETTEEEEEEECTTCCTTCEEEEECCSTTTSCC-HHHHHHHHHHHHHHHTSEEEEECCCC-------------TTT
T ss_pred EEEEeeCCeEEEEEeCCCCCCccEEEEEcCCccccCC-hHHHHHHHHHHHHhcCCEEEEEeCCC-------------CCC
Confidence 44455677777766543 2347999999976 45 4788888888876 489999999999 544
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHH-hCCccEEEEEeChhHHHHHHHHHhCCcc----cceeeEeccCCCCCchhHHH
Q psy4974 148 SLPKGRSFVPFQYIEEDVDIAYELLKL-LGVCKVSLFGWCDGGHLSFVFSMKYPHM----VHKLVIWGTKSFLTIDNVRV 222 (345)
Q Consensus 148 s~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~i~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~ 222 (345)
.. + . ..+++..+.+..+.+. ++.++++|+|||+||.+|+.++.+.+++ ++++|+++|...........
T Consensus 125 ~~-----~-~-~~~~D~~~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~ 197 (322)
T 3fak_A 125 HP-----F-P-AAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSF 197 (322)
T ss_dssp SC-----T-T-HHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHH
T ss_pred CC-----C-C-cHHHHHHHHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCH
Confidence 32 1 1 1334444444444554 3445999999999999999999887664 99999999977643322211
Q ss_pred HHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHH
Q psy4974 223 FEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQ 302 (345)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~ 302 (345)
.................+...+.... .. ...........+..+ .|+|+++|+.|.+++ .+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------------~~~~~sp~~~~~~~~-pP~li~~g~~D~~~~--~~~ 258 (322)
T 3fak_A 198 KTRAEADPMVAPGGINKMAARYLNGA--DA--------------KHPYASPNFANLKGL-PPLLIHVGRDEVLLD--DSI 258 (322)
T ss_dssp HHTTTTCCSCCSSHHHHHHHHHHTTS--CT--------------TCTTTCGGGSCCTTC-CCEEEEEETTSTTHH--HHH
T ss_pred HHhCccCcccCHHHHHHHHHHhcCCC--CC--------------CCcccCCCcccccCC-ChHhEEEcCcCccHH--HHH
Confidence 11110000111111111111110000 00 000000111222222 499999999998753 444
Q ss_pred HHHhhc----CCcEEEEeCCCCCcccc-----cChHHHHHHHHHHHHhhc
Q psy4974 303 SLLNQL----KFCQYYQFSSGGHSCHI-----KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 303 ~~~~~~----~~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~~ 343 (345)
.+++.+ ..++++++++++|.+.. +..+++.+.+.+||++..
T Consensus 259 ~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (322)
T 3fak_A 259 KLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQW 308 (322)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 444443 46799999999998763 446888899999998653
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-21 Score=170.43 Aligned_cols=203 Identities=12% Similarity=0.047 Sum_probs=136.0
Q ss_pred CCceEEEEcCcC---CCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 92 GAQVLFFTYGVL---GEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 92 ~~p~vv~lHG~~---~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
+.|+||++||++ ++ ...|..++..|+++||.|+++|+|+ +|.+..+. ...+..+.++.+
T Consensus 81 ~~p~vv~~HGgg~~~~~-~~~~~~~~~~l~~~G~~v~~~d~r~-------------~~~~~~~~----~~~d~~~~~~~l 142 (303)
T 4e15_A 81 QAPLFVFVHGGYWQEMD-MSMSCSIVGPLVRRGYRVAVMDYNL-------------CPQVTLEQ----LMTQFTHFLNWI 142 (303)
T ss_dssp TCCEEEEECCSTTTSCC-GGGSCTTHHHHHHTTCEEEEECCCC-------------TTTSCHHH----HHHHHHHHHHHH
T ss_pred CCCEEEEECCCcCcCCC-hhHHHHHHHHHHhCCCEEEEecCCC-------------CCCCChhH----HHHHHHHHHHHH
Confidence 348999999954 44 4667778888888899999999999 87652111 111222223333
Q ss_pred HHHHHHhCCccEEEEEeChhHHHHHHHHHhCC-------cccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHH
Q psy4974 169 YELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP-------HMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVL 241 (345)
Q Consensus 169 ~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p-------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
.+..+.++.++++|+|||+||.+|+.++.+.+ ++++++|++++................
T Consensus 143 ~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~~~~~~~~-------------- 208 (303)
T 4e15_A 143 FDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLESVNPK-------------- 208 (303)
T ss_dssp HHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHTCTTTSGG--------------
T ss_pred HHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhcccccchh--------------
Confidence 33334667789999999999999999998653 379999999987653211100000000
Q ss_pred HHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCC----CCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEE
Q psy4974 242 KAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYV----DVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQY 313 (345)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~ 313 (345)
..+....... .........+..+ .+|+|+++|++|.+++...++.+.+.++ ++++
T Consensus 209 ~~~~~~~~~~-----------------~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~ 271 (303)
T 4e15_A 209 NILGLNERNI-----------------ESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASF 271 (303)
T ss_dssp GTTCCCTTTT-----------------TTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred hhhcCCHHHH-----------------HHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEE
Confidence 0000000000 0000011233433 8999999999999999999998888774 5699
Q ss_pred EEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 314 YQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 314 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+++++++|+.+++.+......+.+||.+..
T Consensus 272 ~~~~g~~H~~~~~~~~~~~~~l~~~l~~~~ 301 (303)
T 4e15_A 272 TLFKGYDHFDIIEETAIDDSDVSRFLRNIE 301 (303)
T ss_dssp EEEEEEETTHHHHGGGSTTSHHHHHHHHHH
T ss_pred EEeCCCCchHHHHHHhCCCcHHHHHHHHhh
Confidence 999999999999999988888998887653
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.84 E-value=6.7e-20 Score=155.35 Aligned_cols=207 Identities=16% Similarity=0.068 Sum_probs=130.2
Q ss_pred CceEEEEcCcCCCchhhHH----HHHHhhCCCCeEEEEeCCCCchhh-hccCCc-------cCCCCCCCCC---CCCCCC
Q psy4974 93 AQVLFFTYGVLGEIRNSFK----KQLTAFDPKLFTSIFWDPPGNVVL-YLLGKT-------CSGYGQSLPK---GRSFVP 157 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~----~~~~~L~~~G~~vi~~D~~G~~~~-~~~g~~-------~~~~G~s~~~---~~~~~~ 157 (345)
.|+|||+||++++. ..|. .+.+.|.+.||+|+++|+|+.... -+.+.. ..++|.+... .... .
T Consensus 5 ~~~vl~lHG~g~~~-~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~-~ 82 (243)
T 1ycd_A 5 IPKLLFLHGFLQNG-KVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEIS-H 82 (243)
T ss_dssp CCEEEEECCTTCCH-HHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSG-G
T ss_pred CceEEEeCCCCccH-HHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCc-c
Confidence 46899999999995 7776 466777776899999999941000 000000 0003332100 0001 2
Q ss_pred ccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCc------ccceeeEeccCCCCCchhHHHHHHhHhccC
Q psy4974 158 FQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH------MVHKLVIWGTKSFLTIDNVRVFEGMRRLSN 231 (345)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 231 (345)
..++.+.++.+.+.++..+ ++++|+||||||.+|+.+|.+++. .++.++++++........ .
T Consensus 83 ~~d~~~~~~~l~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~-----------~ 150 (243)
T 1ycd_A 83 ELDISEGLKSVVDHIKANG-PYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP-----------E 150 (243)
T ss_dssp GCCCHHHHHHHHHHHHHHC-CCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT-----------T
T ss_pred hhhHHHHHHHHHHHHHhcC-CeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc-----------c
Confidence 2356667777777766555 679999999999999999987532 466777776654321100 0
Q ss_pred CChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCc
Q psy4974 232 WSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFC 311 (345)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~ 311 (345)
.... . .+... +. .....+.++++|+++++|++|.++|.+.++.+.+.+++.
T Consensus 151 ~~~~--------~-----~~~~~--------------~~--~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~ 201 (243)
T 1ycd_A 151 HPGE--------L-----RITEK--------------FR--DSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKA 201 (243)
T ss_dssp STTC--------E-----EECGG--------------GT--TTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHH
T ss_pred cccc--------c-----ccchh--------------HH--HhccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhh
Confidence 0000 0 00000 00 001234568999999999999999999999888877542
Q ss_pred -------EEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 312 -------QYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 312 -------~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
...+++++||.+..+ +.+.+.+.+||++..+
T Consensus 202 ~g~~~~~~~~~~~~~gH~~~~~--~~~~~~i~~fl~~~~~ 239 (243)
T 1ycd_A 202 QNGNKEKVLAYEHPGGHMVPNK--KDIIRPIVEQITSSLQ 239 (243)
T ss_dssp TTTCTTTEEEEEESSSSSCCCC--HHHHHHHHHHHHHHHC
T ss_pred ccccccccEEEecCCCCcCCch--HHHHHHHHHHHHHhhh
Confidence 566777899987654 3688999999987643
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-19 Score=158.72 Aligned_cols=221 Identities=14% Similarity=0.102 Sum_probs=133.0
Q ss_pred eEEEEEc---CCCCceEEEEcCcC---CCchhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC
Q psy4974 83 DIRFIKY---GSGAQVLFFTYGVL---GEIRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF 155 (345)
Q Consensus 83 ~l~~~~~---g~~~p~vv~lHG~~---~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~ 155 (345)
.+....+ +...|+||++||++ ++ ...|..++..|+. .||.|+++|+|+ .+....+
T Consensus 74 ~i~~~~~~p~~~~~p~vv~~HGgg~~~g~-~~~~~~~~~~la~~~g~~V~~~dyr~-------------~p~~~~~---- 135 (326)
T 3ga7_A 74 DVTTRLYSPQPTSQATLYYLHGGGFILGN-LDTHDRIMRLLARYTGCTVIGIDYSL-------------SPQARYP---- 135 (326)
T ss_dssp CEEEEEEESSSSCSCEEEEECCSTTTSCC-TTTTHHHHHHHHHHHCSEEEEECCCC-------------TTTSCTT----
T ss_pred CeEEEEEeCCCCCCcEEEEECCCCcccCC-hhhhHHHHHHHHHHcCCEEEEeeCCC-------------CCCCCCC----
Confidence 5554443 23348999999998 77 4888899999988 689999999999 5443211
Q ss_pred CCccchHHHHHHHHHHHHH----hCC--ccEEEEEeChhHHHHHHHHHhCCcc------cceeeEeccCCCCCchhHHHH
Q psy4974 156 VPFQYIEEDVDIAYELLKL----LGV--CKVSLFGWCDGGHLSFVFSMKYPHM------VHKLVIWGTKSFLTIDNVRVF 223 (345)
Q Consensus 156 ~~~~~~~~~~~~~~~~l~~----~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~------v~~lvl~~~~~~~~~~~~~~~ 223 (345)
...+.+.++.+++.. +++ ++++|+|||+||.+|+.+|.+.+++ +++++++.+............
T Consensus 136 ----~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~ 211 (326)
T 3ga7_A 136 ----QAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSRRL 211 (326)
T ss_dssp ----HHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHHHHH
T ss_pred ----cHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChhHhh
Confidence 122223333333332 233 5899999999999999999987764 899999988655432211100
Q ss_pred HHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHH
Q psy4974 224 EGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQS 303 (345)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~ 303 (345)
.. .............+...+.... ... ...........+.....|+++++|+.|.+++ ....
T Consensus 212 ~~-~~~~~l~~~~~~~~~~~~~~~~--~~~-------------~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~ 273 (326)
T 3ga7_A 212 FG-GAWDGLTREDLDMYEKAYLRND--EDR-------------ESPWYCLFNNDLTRDVPPCFIASAEFDPLID--DSRL 273 (326)
T ss_dssp CC-CTTTTCCHHHHHHHHHHHCSSG--GGG-------------GCTTTSGGGSCCSSCCCCEEEEEETTCTTHH--HHHH
T ss_pred hc-CCCCCCCHHHHHHHHHHhCCCC--Ccc-------------CCcccCCCcchhhcCCCCEEEEecCcCcCHH--HHHH
Confidence 00 0000001111111111111110 000 0000001122344456799999999999885 4444
Q ss_pred HHhhc----CCcEEEEeCCCCCcccc-----cChHHHHHHHHHHHHhhc
Q psy4974 304 LLNQL----KFCQYYQFSSGGHSCHI-----KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 304 ~~~~~----~~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~~ 343 (345)
+++.+ ..++++++++++|.+.. ++.+++.+.+.+||++..
T Consensus 274 ~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l 322 (326)
T 3ga7_A 274 LHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARM 322 (326)
T ss_dssp HHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHh
Confidence 44443 35799999999998753 345889999999998764
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.8e-20 Score=178.12 Aligned_cols=223 Identities=12% Similarity=0.087 Sum_probs=142.4
Q ss_pred EEEcCceEEEEEcC-------CCCceEEEEcCcCCCch--hhHH-HHHHhh-CCCCeEEEEeCCCCchhhhccCCccCCC
Q psy4974 77 FSIKGCDIRFIKYG-------SGAQVLFFTYGVLGEIR--NSFK-KQLTAF-DPKLFTSIFWDPPGNVVLYLLGKTCSGY 145 (345)
Q Consensus 77 ~~~~g~~l~~~~~g-------~~~p~vv~lHG~~~~~~--~~~~-~~~~~L-~~~G~~vi~~D~~G~~~~~~~g~~~~~~ 145 (345)
+...+..+++.... .+.|+||++||++++.. ..|. .+...| +++||.|+++|+|| +
T Consensus 473 ~~~~~~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG-------------~ 539 (719)
T 1z68_A 473 LEVDEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRG-------------T 539 (719)
T ss_dssp EEETTEEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTT-------------B
T ss_pred EecCCeEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCC-------------C
Confidence 44455777766542 12378999999987631 2332 234444 46799999999999 9
Q ss_pred CCCCCCC-----CCCCCccchHHHHHHHHHHHHH--hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch
Q psy4974 146 GQSLPKG-----RSFVPFQYIEEDVDIAYELLKL--LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID 218 (345)
Q Consensus 146 G~s~~~~-----~~~~~~~~~~~~~~~~~~~l~~--~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 218 (345)
|.+.... ..+ ....+++..+.+..+.+. ++.++++|+|||+||.+|+.+|.++|++++++|+++|.......
T Consensus 540 g~~~~~~~~~~~~~~-~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~ 618 (719)
T 1z68_A 540 AFQGDKLLYAVYRKL-GVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYY 618 (719)
T ss_dssp SSSCHHHHGGGTTCT-THHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTS
T ss_pred CCCchhhHHHHhhcc-CcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHh
Confidence 8874221 111 111222223333333331 12358999999999999999999999999999999987653221
Q ss_pred hHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCC-CEEEEEeCCCCCCC
Q psy4974 219 NVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDV-PVLVFHSADDVMVS 297 (345)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvl~i~G~~D~~v~ 297 (345)
.... ....+... ...... ..+... .....+.++++ |+|+++|++|..+|
T Consensus 619 ~~~~-----------------~~~~~g~~--~~~~~~--------~~~~~~---~~~~~~~~~~~~P~li~~G~~D~~v~ 668 (719)
T 1z68_A 619 ASVY-----------------TERFMGLP--TKDDNL--------EHYKNS---TVMARAEYFRNVDYLLIHGTADDNVH 668 (719)
T ss_dssp BHHH-----------------HHHHHCCS--STTTTH--------HHHHHT---CSGGGGGGGTTSEEEEEEETTCSSSC
T ss_pred cccc-----------------chhhcCCc--ccccch--------hhhhhC---CHhHHHhcCCCCcEEEEEeCCCCCcC
Confidence 1000 00111111 000000 001111 11234556777 89999999999999
Q ss_pred hHHHHHHHhhcC----CcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 298 TQQVQSLLNQLK----FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 298 ~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
.+.++++.+.++ ..++++++++||.+..+.++++.+.+.+||+++.
T Consensus 669 ~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l 718 (719)
T 1z68_A 669 FQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQCF 718 (719)
T ss_dssp THHHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHHHHHHHhh
Confidence 998888887663 4579999999999976779999999999998764
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.82 E-value=3.6e-19 Score=153.99 Aligned_cols=204 Identities=16% Similarity=0.134 Sum_probs=124.8
Q ss_pred CceEEEEcCcCCCchhhHHHH---HHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC---------C----
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQ---LTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF---------V---- 156 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~---~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~---------~---- 156 (345)
.|+||++||++++. ..|... ...+.+.|+.|+++|.++ +|.+......+ .
T Consensus 47 ~p~vv~lHG~~~~~-~~~~~~~~~~~~~~~~g~~vv~pd~~~-------------~g~~~~~~~~~~~G~g~~~~~~~~~ 112 (280)
T 3i6y_A 47 VPVLYWLSGLTCSD-ENFMQKAGAQRLAAELGIAIVAPDTSP-------------RGEGVADDEGYDLGQGAGFYVNATQ 112 (280)
T ss_dssp EEEEEEECCTTCCS-SHHHHHSCCHHHHHHHTCEEEEECSSC-------------CSTTCCCCSSTTSSTTCCTTCBCCS
T ss_pred ccEEEEecCCCCCh-hHHhhcccHHHHHhhCCeEEEEeCCcc-------------cccccCcccccccccCccccccccC
Confidence 37999999999985 777663 445556689999999988 55432221100 0
Q ss_pred -----CccchHHHHHHHHHHHHH-hCC-ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhc
Q psy4974 157 -----PFQYIEEDVDIAYELLKL-LGV-CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRL 229 (345)
Q Consensus 157 -----~~~~~~~~~~~~~~~l~~-~~~-~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 229 (345)
.........+++..+++. +.. ++++|+|||+||.+|+.+|.++|++++++++++|.........
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~~--------- 183 (280)
T 3i6y_A 113 APWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINNPVNCPW--------- 183 (280)
T ss_dssp TTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCCGGGSHH---------
T ss_pred CCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccccccCch---------
Confidence 001123345677777644 444 7899999999999999999999999999999999765322110
Q ss_pred cCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHH-HHHHHhhc
Q psy4974 230 SNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ-VQSLLNQL 308 (345)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~-~~~~~~~~ 308 (345)
....+...+......... .........+.. .+|+++++|++|.+++.+. .+.+.+.+
T Consensus 184 ------~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~l 241 (280)
T 3i6y_A 184 ------GQKAFTAYLGKDTDTWRE---------------YDASLLMRAAKQ-YVPALVDQGEADNFLAEQLKPEVLEAAA 241 (280)
T ss_dssp ------HHHHHHHHHCSCGGGTGG---------------GCHHHHHHHCSS-CCCEEEEEETTCTTHHHHTCHHHHHHHH
T ss_pred ------HHHHHHHhcCCchHHHHh---------------cCHHHHHHhcCC-CccEEEEEeCCCccccchhhHHHHHHHH
Confidence 011111122211000000 000000111111 5799999999999998632 44444333
Q ss_pred ----CCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 309 ----KFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 309 ----~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
.++++.++++++|.... ...+.+.+.+|+.+..
T Consensus 242 ~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~l~~~~~~l 278 (280)
T 3i6y_A 242 SSNNYPLELRSHEGYDHSYYF--IASFIEDHLRFHSNYL 278 (280)
T ss_dssp HHTTCCEEEEEETTCCSSHHH--HHHHHHHHHHHHHHHH
T ss_pred HHcCCCceEEEeCCCCccHHH--HHHhHHHHHHHHHhhc
Confidence 46799999999997632 2345556666766554
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.1e-19 Score=157.50 Aligned_cols=227 Identities=12% Similarity=0.002 Sum_probs=135.4
Q ss_pred cCceEEEEEc---CCCCceEEEEcCcC---CCchhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 80 KGCDIRFIKY---GSGAQVLFFTYGVL---GEIRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 80 ~g~~l~~~~~---g~~~p~vv~lHG~~---~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
+|..+.+..+ +...|+||++||++ ++ ...|..++..|+. .||.|+++|+|+ .+....+.
T Consensus 69 ~G~~i~~~~~~P~~~~~p~vv~~HGgG~~~g~-~~~~~~~~~~la~~~g~~vv~~dyr~-------------~p~~~~p~ 134 (317)
T 3qh4_A 69 AGRPVPVRIYRAAPTPAPVVVYCHAGGFALGN-LDTDHRQCLELARRARCAVVSVDYRL-------------APEHPYPA 134 (317)
T ss_dssp TSCEEEEEEEECSCSSEEEEEEECCSTTTSCC-TTTTHHHHHHHHHHHTSEEEEECCCC-------------TTTSCTTH
T ss_pred CCCeEEEEEEecCCCCCcEEEEECCCcCccCC-hHHHHHHHHHHHHHcCCEEEEecCCC-------------CCCCCCch
Confidence 4545554443 22347999999987 45 4778888888874 489999999999 55432111
Q ss_pred CCCCCccchHHHHHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHhCCc----ccceeeEeccCCCCCchhHHHHHHh
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYPH----MVHKLVIWGTKSFLTIDNVRVFEGM 226 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~ 226 (345)
..++..+..+.+.+..+.++++ +++|+|||+||.+|+.+|...++ .++++++++|..... .. ......
T Consensus 135 ----~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~-~~-~~~~~~ 208 (317)
T 3qh4_A 135 ----ALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR-PT-ASRSEF 208 (317)
T ss_dssp ----HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS-CC-HHHHHT
T ss_pred ----HHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC-CC-cCHHHh
Confidence 1111222222233333335554 89999999999999999987665 489999999987654 11 111111
Q ss_pred HhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCC--hHHHHHH
Q psy4974 227 RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVS--TQQVQSL 304 (345)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~--~~~~~~~ 304 (345)
.....+...........+.... . ............+..+ .|+++++|+.|.+++ ...++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~--------------~--~~~~~~p~~~~~l~~l-pP~li~~G~~D~~~~~~~~~a~~l 271 (317)
T 3qh4_A 209 RATPAFDGEAASLMWRHYLAGQ--------------T--PSPESVPGRRGQLAGL-PATLITCGEIDPFRDEVLDYAQRL 271 (317)
T ss_dssp TTCSSSCHHHHHHHHHHHHTTC--------------C--CCTTTCGGGCSCCTTC-CCEEEEEEEESTTHHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHHHHHhcCCC--------------C--CCcccCCCcccccCCC-CceeEEecCcCCCchhHHHHHHHH
Confidence 1111111111111111110000 0 0000000001112221 399999999999987 4556666
Q ss_pred HhhcCCcEEEEeCCCCCccc-----ccChHHHHHHHHHHHHhhc
Q psy4974 305 LNQLKFCQYYQFSSGGHSCH-----IKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 305 ~~~~~~~~~~~~~~~gH~~~-----~~~~~~~~~~i~~fl~~~~ 343 (345)
.+...+++++++++++|.+. .+.++++.+.+.+||++..
T Consensus 272 ~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l 315 (317)
T 3qh4_A 272 LGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAF 315 (317)
T ss_dssp HHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHh
Confidence 66667889999999999843 3567889999999998754
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.82 E-value=9.7e-20 Score=178.11 Aligned_cols=205 Identities=15% Similarity=0.112 Sum_probs=136.3
Q ss_pred ceEEEEcCcCCCc--hhhH--HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC-----CCCCCCCccchHHH
Q psy4974 94 QVLFFTYGVLGEI--RNSF--KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP-----KGRSFVPFQYIEED 164 (345)
Q Consensus 94 p~vv~lHG~~~~~--~~~~--~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~-----~~~~~~~~~~~~~~ 164 (345)
|+||++||++++. ...| ......|+++||.|+++|+|| +|.+.. ....+ ....+++.
T Consensus 497 p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG-------------~g~~g~~~~~~~~~~~-~~~~~~d~ 562 (723)
T 1xfd_A 497 PLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRG-------------SGFQGTKLLHEVRRRL-GLLEEKDQ 562 (723)
T ss_dssp EEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTT-------------CSSSHHHHHHTTTTCT-TTHHHHHH
T ss_pred CEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCC-------------CccccHHHHHHHHhcc-CcccHHHH
Confidence 7899999988762 1233 245567777899999999999 887421 11111 11133333
Q ss_pred HHHHHHHHHH--hCCccEEEEEeChhHHHHHHHHHhC----CcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHH
Q psy4974 165 VDIAYELLKL--LGVCKVSLFGWCDGGHLSFVFSMKY----PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS 238 (345)
Q Consensus 165 ~~~~~~~l~~--~~~~~i~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (345)
.+.+..+.+. ++.++++|+|||+||.+|+.+|.++ |++++++|++++........... .
T Consensus 563 ~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~--------------~- 627 (723)
T 1xfd_A 563 MEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAF--------------S- 627 (723)
T ss_dssp HHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHH--------------H-
T ss_pred HHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhhhhc--------------c-
Confidence 4333333322 1235899999999999999999999 99999999999876532111000 0
Q ss_pred HHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCC-CCEEEEEeCCCCCCChHHHHHHHhhc----CCcEE
Q psy4974 239 EVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVD-VPVLVFHSADDVMVSTQQVQSLLNQL----KFCQY 313 (345)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~ 313 (345)
...+.... .... .+........+.+++ +|+|+++|++|.++|.+.++.+.+.+ +++++
T Consensus 628 --~~~~~~~~-~~~~--------------~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 690 (723)
T 1xfd_A 628 --ERYLGLHG-LDNR--------------AYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSL 690 (723)
T ss_dssp --HHHHCCCS-SCCS--------------STTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEE
T ss_pred --HhhcCCcc-CChh--------------HHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEE
Confidence 00011000 0000 000111123345677 79999999999999999888887776 46799
Q ss_pred EEeCCCCCcc-cccChHHHHHHHHHHHHhhcc
Q psy4974 314 YQFSSGGHSC-HIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 314 ~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~~k 344 (345)
++++++||.+ ..+.++++.+.+.+||.++.+
T Consensus 691 ~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 691 QIYPDESHYFTSSSLKQHLYRSIINFFVECFR 722 (723)
T ss_dssp EEETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred EEECCCCcccccCcchHHHHHHHHHHHHHHhc
Confidence 9999999998 567899999999999987654
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.6e-19 Score=153.79 Aligned_cols=203 Identities=13% Similarity=0.126 Sum_probs=126.2
Q ss_pred CceEEEEcCcCCCchhhHHH---HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC-CCC---------C---
Q psy4974 93 AQVLFFTYGVLGEIRNSFKK---QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG-RSF---------V--- 156 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~-~~~---------~--- 156 (345)
.|+||++||++++. ..|.. +.+.+.+.||.|+++|+|| +|.+.... ..| .
T Consensus 44 ~p~vv~lHG~~~~~-~~~~~~~~~~~~~~~~g~~vv~~d~~g-------------~G~s~~~~~~~~~~g~~~~~~~~~~ 109 (278)
T 3e4d_A 44 CPVVWYLSGLTCTH-ANVMEKGEYRRMASELGLVVVCPDTSP-------------RGNDVPDELTNWQMGKGAGFYLDAT 109 (278)
T ss_dssp EEEEEEECCTTCCS-HHHHHHSCCHHHHHHHTCEEEECCSSC-------------CSTTSCCCTTCTTSBTTBCTTSBCC
T ss_pred CCEEEEEcCCCCCc-cchhhcccHHHHHhhCCeEEEecCCcc-------------cCcccccccccccccCCccccccCC
Confidence 37999999999995 78876 3444555589999999999 87764332 000 0
Q ss_pred ------CccchHHHHHHHHHHHHHh-CC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhH
Q psy4974 157 ------PFQYIEEDVDIAYELLKLL-GV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMR 227 (345)
Q Consensus 157 ------~~~~~~~~~~~~~~~l~~~-~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 227 (345)
........++++.++++.. +. ++++|+|||+||.+|+.+|.++|++++++++++|........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~-------- 181 (278)
T 3e4d_A 110 EEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSSAD-------- 181 (278)
T ss_dssp STTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSCGGGCT--------
T ss_pred cCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcccccCCc--------
Confidence 0011233355677777765 65 689999999999999999999999999999999876532111
Q ss_pred hccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHH-HHHHHh
Q psy4974 228 RLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ-VQSLLN 306 (345)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~-~~~~~~ 306 (345)
+ ....+...+.... ..+. ..........+ ...+|+++++|++|.+++... .+.+.+
T Consensus 182 ----~---~~~~~~~~~~~~~----~~~~-----------~~~~~~~~~~~-~~~~p~li~~G~~D~~v~~~~~~~~~~~ 238 (278)
T 3e4d_A 182 ----W---SEPALEKYLGADR----AAWR-----------RYDACSLVEDG-ARFPEFLIDQGKADSFLEKGLRPWLFEE 238 (278)
T ss_dssp ----T---THHHHHHHHCSCG----GGGG-----------GGCHHHHHHTT-CCCSEEEEEEETTCTTHHHHTCTHHHHH
T ss_pred ----c---chhhHHHhcCCcH----HHHH-----------hcChhhHhhcC-CCCCcEEEEecCCCcccccchhHHHHHH
Confidence 0 0111111222110 0000 00000001111 145699999999999988522 344444
Q ss_pred hcC----CcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 307 QLK----FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 307 ~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
.+. ++++.++++++|.... -+...+.+.+|+.+.
T Consensus 239 ~l~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~l~~~~~~ 276 (278)
T 3e4d_A 239 AIKGTDIGLTLRMHDRYDHSYYF--ISTFMDDHLKWHAER 276 (278)
T ss_dssp HHTTSSCEEEEEEETTCCSSHHH--HHHHHHHHHHHHHHH
T ss_pred HHHHcCCCceEEEeCCCCcCHHH--HHHHHHHHHHHHHHh
Confidence 442 4689999999997543 234455566666554
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.3e-19 Score=156.85 Aligned_cols=199 Identities=15% Similarity=0.090 Sum_probs=130.8
Q ss_pred CceEEEEcCcCCCchhh-HH-HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNS-FK-KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~-~~-~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
+++|||+||++++. .. |. .+.+.|.++||+|+++|+|| ||.++.. ...++..+.+..
T Consensus 31 ~~~VvllHG~~~~~-~~~~~~~l~~~L~~~G~~v~~~d~~g-------------~g~~~~~-------~~~~~l~~~i~~ 89 (317)
T 1tca_A 31 SKPILLVPGTGTTG-PQSFDSNWIPLSTQLGYTPCWISPPP-------------FMLNDTQ-------VNTEYMVNAITA 89 (317)
T ss_dssp SSEEEEECCTTCCH-HHHHTTTHHHHHHTTTCEEEEECCTT-------------TTCSCHH-------HHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCc-chhhHHHHHHHHHhCCCEEEEECCCC-------------CCCCcHH-------HHHHHHHHHHHH
Confidence 35899999999995 65 88 89999998899999999999 9876211 134455666667
Q ss_pred HHHHhCCccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccC
Q psy4974 171 LLKLLGVCKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDND 247 (345)
Q Consensus 171 ~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
+++..+.++++|+||||||.++..++..+| ++|+++|+++++........ ..... .... ..........
T Consensus 90 ~~~~~g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~-~~~~~---~~~~----~~~~~~~~~s 161 (317)
T 1tca_A 90 LYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAG-PLDAL---AVSA----PSVWQQTTGS 161 (317)
T ss_dssp HHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGH-HHHHT---TCBC----HHHHHTBTTC
T ss_pred HHHHhCCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchh-hhhhh---hhcC----chHHhhCcCc
Confidence 777778889999999999999999988776 78999999998754322211 11100 0000 0000000000
Q ss_pred CchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHH--HHHHHhhcCCcEEEEe-------CC
Q psy4974 248 VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ--VQSLLNQLKFCQYYQF-------SS 318 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~--~~~~~~~~~~~~~~~~-------~~ 318 (345)
.+...+.. . . .....+|+++|+|+.|.++++.. .+.....+++++.+.+ ++
T Consensus 162 ---------~f~~~L~~----~-----~--~~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~~a~~~~~~~~~~~~~~ 221 (317)
T 1tca_A 162 ---------ALTTALRN----A-----G--GLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFNGKNVQAQAVCGPLFV 221 (317)
T ss_dssp ---------HHHHHHHH----T-----T--TTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBTSEEEEHHHHHCTTCC
T ss_pred ---------HHHHHHHh----c-----C--CCCCCCCEEEEEeCCCCeECCccccccchhhhccCCccEEeeeccCCCCc
Confidence 01111110 0 0 01236899999999999998665 2222333444554444 47
Q ss_pred CCCcccccChHHHHHHHHHHHHh
Q psy4974 319 GGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 319 ~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
.+|..++++|+.+ +.|.+||+.
T Consensus 222 ~gH~~~l~~p~~~-~~v~~~L~~ 243 (317)
T 1tca_A 222 IDHAGSLTSQFSY-VVGRSALRS 243 (317)
T ss_dssp CCTTHHHHBHHHH-HHHHHHHHC
T ss_pred cCcccccCCHHHH-HHHHHHhcC
Confidence 8999999988865 677899876
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-18 Score=154.14 Aligned_cols=212 Identities=14% Similarity=0.123 Sum_probs=140.1
Q ss_pred eEEEEcC--cCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 95 VLFFTYG--VLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 95 ~vv~lHG--~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
+++|+|| ++++. ..|..++..|.. ++.|+++|+|| +|.+....... ...+++++++++.+.+
T Consensus 91 ~l~~~hg~g~~~~~-~~~~~l~~~L~~-~~~v~~~d~~G-------------~g~~~~~~~~~-~~~~~~~~a~~~~~~i 154 (319)
T 2hfk_A 91 VLVGCTGTAANGGP-HEFLRLSTSFQE-ERDFLAVPLPG-------------YGTGTGTGTAL-LPADLDTALDAQARAI 154 (319)
T ss_dssp EEEEECCCCTTCST-TTTHHHHHTTTT-TCCEEEECCTT-------------CCBC---CBCC-EESSHHHHHHHHHHHH
T ss_pred cEEEeCCCCCCCcH-HHHHHHHHhcCC-CCceEEecCCC-------------CCCCcccccCC-CCCCHHHHHHHHHHHH
Confidence 8999998 66674 899999999985 59999999999 99872100000 2237888899998888
Q ss_pred HHh-CCccEEEEEeChhHHHHHHHHHhCC----cccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccC
Q psy4974 173 KLL-GVCKVSLFGWCDGGHLSFVFSMKYP----HMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDND 247 (345)
Q Consensus 173 ~~~-~~~~i~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
+.+ +..+++|+|||+||.+|+.+|.+.+ ++|++++++++.......... ..+. ......... .
T Consensus 155 ~~~~~~~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~~--~~~~-------~l~~~~~~~---~ 222 (319)
T 2hfk_A 155 LRAAGDAPVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIE--VWSR-------QLGEGLFAG---E 222 (319)
T ss_dssp HHHHTTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHHH--HTHH-------HHHHHHHHT---C
T ss_pred HHhcCCCCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHHH--HHHH-------HhhHHHHHh---h
Confidence 776 4578999999999999999998874 569999999986543221100 0000 000111110 0
Q ss_pred CchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHH-HHHHHhhcC-CcEEEEeCCCCCcccc
Q psy4974 248 VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ-VQSLLNQLK-FCQYYQFSSGGHSCHI 325 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~-~~~~~~~~~-~~~~~~~~~~gH~~~~ 325 (345)
+.. ........+..+..... ......+++|+++++| +|.+++... ...+.+..+ +.+++.++ +||+.++
T Consensus 223 --~~~-~~~~~~~~~~~~~~~~~----~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~~~~~~~v~-g~H~~~~ 293 (319)
T 2hfk_A 223 --LEP-MSDARLLAMGRYARFLA----GPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWDLPHTVADVP-GDHFTMM 293 (319)
T ss_dssp --SSC-CCHHHHHHHHHHHHHHH----SCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSSCSEEEEES-SCTTHHH
T ss_pred --ccc-cchHHHHHHHHHHHHHH----hCCCCCcCCCEEEEEc-CCCCCCccccccchhhcCCCCCEEEEeC-CCcHHHH
Confidence 000 00111111111111110 1124678999999999 999887665 455555554 57899998 7999765
Q ss_pred -cChHHHHHHHHHHHHhhc
Q psy4974 326 -KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 326 -~~~~~~~~~i~~fl~~~~ 343 (345)
++++++++.|.+||.+..
T Consensus 294 ~e~~~~~~~~i~~~L~~~~ 312 (319)
T 2hfk_A 294 RDHAPAVAEAVLSWLDAIE 312 (319)
T ss_dssp HTCHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHhcC
Confidence 789999999999998654
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.81 E-value=4.2e-19 Score=149.13 Aligned_cols=207 Identities=13% Similarity=0.081 Sum_probs=129.9
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
+.++|+|+||++++. ..|..+++.|.+ ++|+++|+|| +|.. ++++.++
T Consensus 16 ~~~~l~~~hg~~~~~-~~~~~~~~~l~~--~~v~~~d~~g-------------~~~~----------------~~~~~~~ 63 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYG-LMYQNLSSRLPS--YKLCAFDFIE-------------EEDR----------------LDRYADL 63 (230)
T ss_dssp CSEEEEEECCTTCCG-GGGHHHHHHCTT--EEEEEECCCC-------------STTH----------------HHHHHHH
T ss_pred CCCCEEEECCCCCch-HHHHHHHHhcCC--CeEEEecCCC-------------HHHH----------------HHHHHHH
Confidence 346999999999995 999999999975 9999999999 7532 3455566
Q ss_pred HHHhCC-ccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccC
Q psy4974 172 LKLLGV-CKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDND 247 (345)
Q Consensus 172 l~~~~~-~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
++.+.. .+++++|||+||.+|+.+|.+.+ +++++++++++........ ... .. ........+.. ....
T Consensus 64 i~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~--~~~-~~----~~~~~~~~~~~-~~~~ 135 (230)
T 1jmk_C 64 IQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSD--LDG-RT----VESDVEALMNV-NRDN 135 (230)
T ss_dssp HHHHCCSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC---------------CCHHHHHHH-TTTC
T ss_pred HHHhCCCCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccc--ccc-cc----HHHHHHHHHhc-Chhh
Confidence 666664 58999999999999999998764 5799999998754321110 000 00 00000000000 0000
Q ss_pred CchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-CcEEEEeCCCCC--ccc
Q psy4974 248 VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-FCQYYQFSSGGH--SCH 324 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH--~~~ 324 (345)
..................+..+.. .......+++|+++++|++|..++. ....+.+..+ +.+++.+++ || ++.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~w~~~~~~~~~~~~i~g-~H~~~~~ 211 (230)
T 1jmk_C 136 EALNSEAVKHGLKQKTHAFYSYYV--NLISTGQVKADIDLLTSGADFDIPE-WLASWEEATTGAYRMKRGFG-THAEMLQ 211 (230)
T ss_dssp SGGGSHHHHHHHHHHHHHHHHHHH--HCCCCSCBSSEEEEEECSSCCCCCT-TEECSGGGBSSCEEEEECSS-CGGGTTS
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhh--hccccccccccEEEEEeCCCCCCcc-ccchHHHhcCCCeEEEEecC-ChHHHcC
Confidence 001111111111110011111100 0124567899999999999998873 3334444443 578999985 99 777
Q ss_pred ccChHHHHHHHHHHHHhh
Q psy4974 325 IKHGQVFNEISRNFILEE 342 (345)
Q Consensus 325 ~~~~~~~~~~i~~fl~~~ 342 (345)
.++++++.+.|.+||.++
T Consensus 212 ~~~~~~~~~~i~~~l~~~ 229 (230)
T 1jmk_C 212 GETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp HHHHHHHHHHHHHHHTCB
T ss_pred cHhHHHHHHHHHHHHhhc
Confidence 788999999999999764
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.81 E-value=4.7e-19 Score=173.99 Aligned_cols=222 Identities=13% Similarity=0.089 Sum_probs=142.2
Q ss_pred EEEcCceEEEEEcCC-------CCceEEEEcCcCCCc--hhhHH-HHHHhhC-CCCeEEEEeCCCCchhhhccCCccCCC
Q psy4974 77 FSIKGCDIRFIKYGS-------GAQVLFFTYGVLGEI--RNSFK-KQLTAFD-PKLFTSIFWDPPGNVVLYLLGKTCSGY 145 (345)
Q Consensus 77 ~~~~g~~l~~~~~g~-------~~p~vv~lHG~~~~~--~~~~~-~~~~~L~-~~G~~vi~~D~~G~~~~~~~g~~~~~~ 145 (345)
+..+|..+.+....+ ..|+||++||++++. ...|. .+...|+ ++||.|+++|+|| +
T Consensus 479 ~~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG-------------~ 545 (740)
T 4a5s_A 479 IILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRG-------------S 545 (740)
T ss_dssp EEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTT-------------C
T ss_pred EccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCC-------------C
Confidence 356888888775421 227899999998762 12222 1233444 5799999999999 8
Q ss_pred CCCCCC-----CCCCCCccchHHHHHHHHHHHHHhC---CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCc
Q psy4974 146 GQSLPK-----GRSFVPFQYIEEDVDIAYELLKLLG---VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTI 217 (345)
Q Consensus 146 G~s~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~---~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 217 (345)
|.+... ...+ ....+++..+.+..+. ..+ .+++.|+|||+||.+|+.+|.++|++++++|+++|......
T Consensus 546 g~~g~~~~~~~~~~~-~~~~~~D~~~~i~~l~-~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~ 623 (740)
T 4a5s_A 546 GYQGDKIMHAINRRL-GTFEVEDQIEAARQFS-KMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEY 623 (740)
T ss_dssp SSSCHHHHGGGTTCT-TSHHHHHHHHHHHHHH-TSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGG
T ss_pred CcCChhHHHHHHhhh-CcccHHHHHHHHHHHH-hcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHH
Confidence 765321 1111 1112333333333333 333 25899999999999999999999999999999998765321
Q ss_pred hhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCC-CEEEEEeCCCCCC
Q psy4974 218 DNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDV-PVLVFHSADDVMV 296 (345)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvl~i~G~~D~~v 296 (345)
..... ....+... ...... ..+.. ......+.++++ |+|+++|++|..+
T Consensus 624 ~~~~~-----------------~~~~~~~p--~~~~~~--------~~~~~---~~~~~~~~~i~~~P~Lii~G~~D~~v 673 (740)
T 4a5s_A 624 YDSVY-----------------TERYMGLP--TPEDNL--------DHYRN---STVMSRAENFKQVEYLLIHGTADDNV 673 (740)
T ss_dssp SBHHH-----------------HHHHHCCS--STTTTH--------HHHHH---SCSGGGGGGGGGSEEEEEEETTCSSS
T ss_pred hhhHH-----------------HHHHcCCC--CccccH--------HHHHh---CCHHHHHhcCCCCcEEEEEcCCCCcc
Confidence 11000 00111110 000000 00111 111233455665 9999999999999
Q ss_pred ChHHHHHHHhhcC----CcEEEEeCCCCCcc-cccChHHHHHHHHHHHHhhc
Q psy4974 297 STQQVQSLLNQLK----FCQYYQFSSGGHSC-HIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 297 ~~~~~~~~~~~~~----~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~~ 343 (345)
|.+.++++.+.++ +.+++++++++|.+ ..+.++.+.+.+.+||++..
T Consensus 674 ~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 725 (740)
T 4a5s_A 674 HFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCF 725 (740)
T ss_dssp CTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHc
Confidence 9988888877763 56899999999998 55778999999999998764
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=5.8e-19 Score=152.63 Aligned_cols=204 Identities=14% Similarity=0.133 Sum_probs=123.0
Q ss_pred CceEEEEcCcCCCchhhHHHH---HHhhCCCCeEEEEeCC--CCchhhhccCCccCCCCCCCCC--------CCCCC--C
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQ---LTAFDPKLFTSIFWDP--PGNVVLYLLGKTCSGYGQSLPK--------GRSFV--P 157 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~---~~~L~~~G~~vi~~D~--~G~~~~~~~g~~~~~~G~s~~~--------~~~~~--~ 157 (345)
.|+||++||++++. ..|... .+.+++.||.|+++|+ || +|.+... ...|. .
T Consensus 45 ~p~vv~lHG~~~~~-~~~~~~~~~~~~~~~~g~~vv~~d~~~rG-------------~~~~~~~~~~~~g~~~~~~~~~~ 110 (282)
T 3fcx_A 45 CPALYWLSGLTCTE-QNFISKSGYHQSASEHGLVVIAPDTSPRG-------------CNIKGEDESWDFGTGAGFYVDAT 110 (282)
T ss_dssp EEEEEEECCTTCCS-HHHHHHSCCHHHHHHHTCEEEEECSCSSC-------------CCC--------CCCCCCTTCBCC
T ss_pred CCEEEEEcCCCCCc-cchhhcchHHHHhhcCCeEEEEeccccCc-------------cccccccccccccCCcccccccC
Confidence 37999999999985 788765 5677778999999999 66 4332110 00000 0
Q ss_pred -------ccchHHHHHHHHHHHH-HhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhH
Q psy4974 158 -------FQYIEEDVDIAYELLK-LLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMR 227 (345)
Q Consensus 158 -------~~~~~~~~~~~~~~l~-~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 227 (345)
.......++++..+++ .+++ ++++|+|||+||.+|+.+|.++|++++++++++|.........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~~------- 183 (282)
T 3fcx_A 111 EDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPW------- 183 (282)
T ss_dssp STTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGGSHH-------
T ss_pred cccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCcccCch-------
Confidence 0112334556666666 4444 5899999999999999999999999999999998765322110
Q ss_pred hccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHH------H
Q psy4974 228 RLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ------V 301 (345)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~------~ 301 (345)
....+...+....... ...........+..+.+|+++++|++|.++|... .
T Consensus 184 --------~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~ 240 (282)
T 3fcx_A 184 --------GKKAFSGYLGTDQSKW---------------KAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFI 240 (282)
T ss_dssp --------HHHHHHHHHC---CCG---------------GGGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHHH
T ss_pred --------hHHHHHHhcCCchhhh---------------hhcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHHHHH
Confidence 0001111111110000 0011111233455668999999999999885432 4
Q ss_pred HHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 302 QSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+.+.+.-.++++.++++++|.... ...+.+...+|+.+.
T Consensus 241 ~~l~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~~~~~~~~ 279 (282)
T 3fcx_A 241 AACTEKKIPVVFRLQEDYDHSYYF--IATFITDHIRHHAKY 279 (282)
T ss_dssp HHHHHTTCCEEEEEETTCCSSHHH--HHHHHHHHHHHHHHH
T ss_pred HHHHHcCCceEEEECCCCCcCHHH--HHhhhHHHHHHHHHh
Confidence 445554456899999999997643 233444555555544
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=8.9e-18 Score=150.98 Aligned_cols=215 Identities=13% Similarity=-0.023 Sum_probs=126.5
Q ss_pred CceEEEEcCcCC---C-chhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLG---E-IRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~---~-~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
.|+||++||++. + ....|..++..|+.+ ||.|+++|+|+ .+... + ....+++.+
T Consensus 112 ~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~Vv~~dyR~-------------~p~~~-----~---~~~~~D~~~ 170 (365)
T 3ebl_A 112 FPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRR-------------APEHR-----Y---PCAYDDGWT 170 (365)
T ss_dssp CEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCC-------------TTTSC-----T---THHHHHHHH
T ss_pred ceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCCEEEEeeCCC-------------CCCCC-----C---cHHHHHHHH
Confidence 379999999863 2 123478888888876 99999999999 54321 1 122222333
Q ss_pred HHHHHHH-------hCCc-cEEEEEeChhHHHHHHHHHhCCc---ccceeeEeccCCCCCchhHHHHHHhHhccCCChhh
Q psy4974 168 AYELLKL-------LGVC-KVSLFGWCDGGHLSFVFSMKYPH---MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMA 236 (345)
Q Consensus 168 ~~~~l~~-------~~~~-~i~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (345)
..+++.. .+.+ +++|+|||+||.+|+.+|.+.++ +++++|+++|............. ...........
T Consensus 171 a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~-~~~~~~~~~~~ 249 (365)
T 3ebl_A 171 ALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERR-LDGKYFVTLQD 249 (365)
T ss_dssp HHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHH-HTTTSSCCHHH
T ss_pred HHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChhhhh-cCCCcccCHHH
Confidence 3333332 2344 89999999999999999988766 79999999997654322211111 00001111111
Q ss_pred HHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchh---hhccCCCCC-CCEEEEEeCCCCCCCh--HHHHHHHhhcCC
Q psy4974 237 RSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNV---YQELLPYVD-VPVLVFHSADDVMVST--QQVQSLLNQLKF 310 (345)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~i~-~Pvl~i~G~~D~~v~~--~~~~~~~~~~~~ 310 (345)
...+...+.... ... ....... ....+..+. .|+|+++|++|.+++. ...+.+.+.-..
T Consensus 250 ~~~~~~~~~~~~--~~~-------------~~~~~~p~~~~~~~l~~~~~pP~Li~~G~~D~l~~~~~~~~~~L~~~g~~ 314 (365)
T 3ebl_A 250 RDWYWKAYLPED--ADR-------------DHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHH 314 (365)
T ss_dssp HHHHHHHHSCTT--CCT-------------TSTTTCTTSTTCCCCTTSCCCCEEEEEETTSTTHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCC--CCC-------------CCcccCCCCCcchhhccCCCCCEEEEEcCcccchhHHHHHHHHHHHCCCC
Confidence 111111111100 000 0000000 011222222 4899999999977653 233444444356
Q ss_pred cEEEEeCCCCCccc----ccChHHHHHHHHHHHHhhcc
Q psy4974 311 CQYYQFSSGGHSCH----IKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 311 ~~~~~~~~~gH~~~----~~~~~~~~~~i~~fl~~~~k 344 (345)
++++++++++|.++ .++.+++.+.+.+||+++.+
T Consensus 315 v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~ 352 (365)
T 3ebl_A 315 VKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLY 352 (365)
T ss_dssp EEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhh
Confidence 89999999999876 35678899999999988754
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.2e-18 Score=146.29 Aligned_cols=197 Identities=11% Similarity=0.023 Sum_probs=129.1
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
+.++|||+||++++. ..|..+++.|.. +++|+++|+|| ++. .++++.+.
T Consensus 21 ~~~~l~~~hg~~~~~-~~~~~~~~~l~~-~~~v~~~d~~g-------------~~~----------------~~~~~~~~ 69 (244)
T 2cb9_A 21 GGKNLFCFPPISGFG-IYFKDLALQLNH-KAAVYGFHFIE-------------EDS----------------RIEQYVSR 69 (244)
T ss_dssp CSSEEEEECCTTCCG-GGGHHHHHHTTT-TSEEEEECCCC-------------STT----------------HHHHHHHH
T ss_pred CCCCEEEECCCCCCH-HHHHHHHHHhCC-CceEEEEcCCC-------------HHH----------------HHHHHHHH
Confidence 346899999999995 999999999986 59999999999 631 24556666
Q ss_pred HHHhC-CccEEEEEeChhHHHHHHHHHhC---CcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccC
Q psy4974 172 LKLLG-VCKVSLFGWCDGGHLSFVFSMKY---PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDND 247 (345)
Q Consensus 172 l~~~~-~~~i~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
++.+. ..+++++||||||.+|+.+|.+. ++++.+++++++........ ... ....+...+. .
T Consensus 70 i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~-----------~~~--~~~~~~~~~~-~ 135 (244)
T 2cb9_A 70 ITEIQPEGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSIT-----------ADT--ENDDSAAYLP-E 135 (244)
T ss_dssp HHHHCSSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCC-----------CC---------CCSC-H
T ss_pred HHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCccccc-----------ccc--cHHHHHHHhH-H
Confidence 77765 46899999999999999999875 56799999999865421000 000 0000000000 0
Q ss_pred CchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeC--CCCCCChHHHHHHHhhcC-CcEEEEeCCCCC--c
Q psy4974 248 VNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSA--DDVMVSTQQVQSLLNQLK-FCQYYQFSSGGH--S 322 (345)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~--~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH--~ 322 (345)
.....+......+...... ......+++|+++++|+ +|. ++......+.+..+ +.++..++ +|| +
T Consensus 136 --~~~~~~~~~~~~~~~~~~~------~~~~~~i~~Pvl~i~g~~~~D~-~~~~~~~~w~~~~~~~~~~~~i~-ggH~~~ 205 (244)
T 2cb9_A 136 --AVRETVMQKKRCYQEYWAQ------LINEGRIKSNIHFIEAGIQTET-SGAMVLQKWQDAAEEGYAEYTGY-GAHKDM 205 (244)
T ss_dssp --HHHHHHTHHHHHHHHHHHH------CCCCSCBSSEEEEEECSBCSCC-CHHHHTTSSGGGBSSCEEEEECS-SBGGGT
T ss_pred --HHHHHHHHHHHHHHHHHHh------hccCCCcCCCEEEEEccCcccc-ccccchhHHHHhcCCCCEEEEec-CChHHH
Confidence 0000000001111111100 12456789999999999 887 44444455555554 68899998 599 6
Q ss_pred ccccChHHHHHHHHHHHHhhc
Q psy4974 323 CHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 323 ~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+..++++++++.|.+||.+..
T Consensus 206 ~~~~~~~~~~~~i~~~L~~~~ 226 (244)
T 2cb9_A 206 LEGEFAEKNANIILNILDKIN 226 (244)
T ss_dssp TSHHHHHHHHHHHHHHHHTC-
T ss_pred cChHHHHHHHHHHHHHHhcCc
Confidence 666789999999999998654
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-18 Score=170.66 Aligned_cols=224 Identities=12% Similarity=0.008 Sum_probs=136.2
Q ss_pred cCceEEEEEcC-----CCCceEEEEcCcCCCch-hhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC--
Q psy4974 80 KGCDIRFIKYG-----SGAQVLFFTYGVLGEIR-NSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK-- 151 (345)
Q Consensus 80 ~g~~l~~~~~g-----~~~p~vv~lHG~~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~-- 151 (345)
+|..+.+.... ...|+||++||+++... ..|......|.++||.|+++|+|| +|.+...
T Consensus 470 dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG-------------~g~~g~~~~ 536 (741)
T 1yr2_A 470 DGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRG-------------GGEYGDAWH 536 (741)
T ss_dssp TSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTT-------------SSTTHHHHH
T ss_pred CCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCC-------------CCCCCHHHH
Confidence 78788766531 23479999999887631 245556667888899999999999 7765211
Q ss_pred -C--CCCCCccchHHHHHHHHHHHHH--hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh
Q psy4974 152 -G--RSFVPFQYIEEDVDIAYELLKL--LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM 226 (345)
Q Consensus 152 -~--~~~~~~~~~~~~~~~~~~~l~~--~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 226 (345)
. ... ....+++..+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+.+|.........
T Consensus 537 ~~~~~~~-~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~------ 609 (741)
T 1yr2_A 537 DAGRRDK-KQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQ------ 609 (741)
T ss_dssp HTTSGGG-THHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGG------
T ss_pred Hhhhhhc-CCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccC------
Confidence 0 000 111234444444444443 1346899999999999999999999999999999998765322110
Q ss_pred HhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCC-CCC-CEEEEEeCCCCCCChHHHHHH
Q psy4974 227 RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPY-VDV-PVLVFHSADDVMVSTQQVQSL 304 (345)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~-Pvl~i~G~~D~~v~~~~~~~~ 304 (345)
.. ...... ..+... ... .. ...+. .......+.. +++ |+|+++|++|..+|+..+.++
T Consensus 610 --~~-~~~~~~----~~~g~~--~~~-------~~-~~~~~---~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~ 669 (741)
T 1yr2_A 610 --FT-AGRYWV----DDYGYP--EKE-------AD-WRVLR---RYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKY 669 (741)
T ss_dssp --ST-TGGGGH----HHHCCT--TSH-------HH-HHHHH---TTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHH
T ss_pred --CC-CCchhH----HHcCCC--CCH-------HH-HHHHH---HcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHH
Confidence 00 000000 001111 000 00 01111 1122344555 775 999999999999999988888
Q ss_pred HhhcCC-------cEEEEeCCCCCccccc--ChHHHHHHHHHHHHhhc
Q psy4974 305 LNQLKF-------CQYYQFSSGGHSCHIK--HGQVFNEISRNFILEEN 343 (345)
Q Consensus 305 ~~~~~~-------~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~~ 343 (345)
.+.++. +++++++++||..... ++.++.+.+.+||.+..
T Consensus 670 ~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 717 (741)
T 1yr2_A 670 TAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAHFT 717 (741)
T ss_dssp HHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 876644 7899999999997653 34578889999998754
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.2e-18 Score=149.05 Aligned_cols=204 Identities=14% Similarity=0.083 Sum_probs=123.8
Q ss_pred ceEEEEcCcCCCchhhHHH---HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC----------------
Q psy4974 94 QVLFFTYGVLGEIRNSFKK---QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS---------------- 154 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~---------------- 154 (345)
|+||++||++++. ..|.. +...+.+.|+.|+++|.++ +|.+......
T Consensus 46 P~vv~lHG~~~~~-~~~~~~~~~~~~~~~~g~~vv~~d~~~-------------~g~~~~~~~~~~~g~g~~~~~~~~~~ 111 (280)
T 3ls2_A 46 PVLYWLSGLTCTD-ENFMQKAGAFKKAAELGIAIVAPDTSP-------------RGDNVPNEDSYDFAQGAGFYVNATQA 111 (280)
T ss_dssp EEEEEECCTTCCS-HHHHHHSCCHHHHHHHTCEEEECCSSC-------------CSTTSCCCSCTTSSTTCCTTCBCCST
T ss_pred CEEEEeCCCCCCh-hhhhcchhHHHHHhhCCeEEEEeCCcc-------------cccccccccccccccCCccccccccc
Confidence 7999999999985 77765 3455556689999999887 4433211100
Q ss_pred -CC-CccchHHHHHHHHHHHHHh-CC-ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc
Q psy4974 155 -FV-PFQYIEEDVDIAYELLKLL-GV-CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS 230 (345)
Q Consensus 155 -~~-~~~~~~~~~~~~~~~l~~~-~~-~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 230 (345)
+. .........+++..+++.. .. ++++|+|||+||.+|+.+|.++|++++++++++|.........
T Consensus 112 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~~---------- 181 (280)
T 3ls2_A 112 PYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVNPINCPW---------- 181 (280)
T ss_dssp TTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSCGGGSHH----------
T ss_pred cccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccCcccCcc----------
Confidence 00 0011233455666666654 22 6899999999999999999999999999999999765322110
Q ss_pred CCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCC-CCCCCEEEEEeCCCCCCCh-----HHHHHH
Q psy4974 231 NWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLP-YVDVPVLVFHSADDVMVST-----QQVQSL 304 (345)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~Pvl~i~G~~D~~v~~-----~~~~~~ 304 (345)
....+...+........ ..........+. ...+|+++++|++|.+++. ...+.+
T Consensus 182 -----~~~~~~~~~g~~~~~~~---------------~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l 241 (280)
T 3ls2_A 182 -----GVKAFTGYLGADKTTWA---------------QYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVA 241 (280)
T ss_dssp -----HHHHHHHHHCSCGGGTG---------------GGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHH
T ss_pred -----hhhHHHhhcCchHHHHH---------------hcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHHHHHH
Confidence 00111111221100000 000000011111 1367999999999999986 233444
Q ss_pred HhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 305 LNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 305 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
.+.-.++++.++++++|.... .....+.+.+|+.+..
T Consensus 242 ~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~~~~~~~~l 278 (280)
T 3ls2_A 242 KQKDYPLTLEMQTGYDHSYFF--ISSFIDQHLVFHHQYL 278 (280)
T ss_dssp HHHTCCEEEEEETTCCSSHHH--HHHHHHHHHHHHHHHH
T ss_pred HHhCCCceEEEeCCCCCchhh--HHHHHHHHHHHHHHHh
Confidence 444457899999999997643 2344455567776654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=170.18 Aligned_cols=223 Identities=11% Similarity=0.063 Sum_probs=140.4
Q ss_pred cCceEEEEEc---C----CCCceEEEEcCcCCCch-hhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 80 KGCDIRFIKY---G----SGAQVLFFTYGVLGEIR-NSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 80 ~g~~l~~~~~---g----~~~p~vv~lHG~~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
+|..+.+... + ...|+||++||+++... ..|......|.++||.|+++|+|| +|.+...
T Consensus 426 dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG-------------~g~~g~~ 492 (695)
T 2bkl_A 426 DGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRG-------------GGEYGKA 492 (695)
T ss_dssp TSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTT-------------SSTTCHH
T ss_pred CCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCC-------------CCCcCHH
Confidence 7778776643 1 23478999999776531 245555555667899999999999 7765321
Q ss_pred C--CCCCCccchHHHHHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHH
Q psy4974 152 G--RSFVPFQYIEEDVDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVF 223 (345)
Q Consensus 152 ~--~~~~~~~~~~~~~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 223 (345)
. .. .........+|+.+.++.+ ..+++.++|||+||++++.++.++|++++++|+.+|.........
T Consensus 493 ~~~~~--~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~--- 567 (695)
T 2bkl_A 493 WHDAG--RLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHL--- 567 (695)
T ss_dssp HHHTT--SGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGG---
T ss_pred HHHhh--HhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccc---
Confidence 0 00 0011122234444443333 345899999999999999999999999999999998765432110
Q ss_pred HHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCC--CCEEEEEeCCCCCCChHHH
Q psy4974 224 EGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVD--VPVLVFHSADDVMVSTQQV 301 (345)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pvl~i~G~~D~~v~~~~~ 301 (345)
.. ...... ..+... ... ... ..+... .....+..++ .|+|+++|++|..+|+..+
T Consensus 568 -----~~-~~~~~~----~~~g~~--~~~----~~~----~~~~~~---sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~ 624 (695)
T 2bkl_A 568 -----FG-SGRTWI----PEYGTA--EKP----EDF----KTLHAY---SPYHHVRPDVRYPALLMMAADHDDRVDPMHA 624 (695)
T ss_dssp -----ST-TGGGGH----HHHCCT--TSH----HHH----HHHHHH---CGGGCCCSSCCCCEEEEEEETTCSSSCTHHH
T ss_pred -----cC-CCcchH----HHhCCC--CCH----HHH----HHHHhc---ChHhhhhhcCCCCCEEEEeeCCCCCCChHHH
Confidence 00 000000 011111 000 000 111111 1233455554 6999999999999999988
Q ss_pred HHHHhhcCC-------cEEEEeCCCCCccc--ccChHHHHHHHHHHHHhhc
Q psy4974 302 QSLLNQLKF-------CQYYQFSSGGHSCH--IKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 302 ~~~~~~~~~-------~~~~~~~~~gH~~~--~~~~~~~~~~i~~fl~~~~ 343 (345)
+++.+.++. +++++++++||... .+++.+..+.+.+||.+..
T Consensus 625 ~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 675 (695)
T 2bkl_A 625 RKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQVL 675 (695)
T ss_dssp HHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 888877643 78999999999873 3556778888999998754
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.9e-18 Score=167.58 Aligned_cols=224 Identities=12% Similarity=0.031 Sum_probs=140.6
Q ss_pred cCceEEEEEc---C----CCCceEEEEcCcCCCc-hhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 80 KGCDIRFIKY---G----SGAQVLFFTYGVLGEI-RNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 80 ~g~~l~~~~~---g----~~~p~vv~lHG~~~~~-~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
+|..|.+... + ...|+||++||+++.. ...|......|.+ +||.|+++|+|| +|.+..
T Consensus 446 dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG-------------~g~~g~ 512 (710)
T 2xdw_A 446 DGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRG-------------GGEYGE 512 (710)
T ss_dssp TSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTT-------------SSTTHH
T ss_pred CCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCC-------------CCCCCh
Confidence 7878776543 1 2347999999987663 1234444456666 799999999999 776521
Q ss_pred C-----CCCCCCccchHHHHHHHHHHHHH--hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHH
Q psy4974 151 K-----GRSFVPFQYIEEDVDIAYELLKL--LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVF 223 (345)
Q Consensus 151 ~-----~~~~~~~~~~~~~~~~~~~~l~~--~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 223 (345)
. .... ....+++..+.+..+++. .+.+++.++|||+||++++.++.++|++++++|+.+|..........
T Consensus 513 ~~~~~~~~~~-~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~-- 589 (710)
T 2xdw_A 513 TWHKGGILAN-KQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKY-- 589 (710)
T ss_dssp HHHHTTSGGG-THHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGS--
T ss_pred HHHHhhhhhc-CCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhcccc--
Confidence 1 0000 111233334444444433 13468999999999999999999999999999999987653221100
Q ss_pred HHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCC-----CCCC-CEEEEEeCCCCCCC
Q psy4974 224 EGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLP-----YVDV-PVLVFHSADDVMVS 297 (345)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~i~~-Pvl~i~G~~D~~v~ 297 (345)
....... ..+... ... .... .+... .....+. .+++ |+|+++|++|..+|
T Consensus 590 -------~~~~~~~----~~~g~~--~~~----~~~~----~~~~~---sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~ 645 (710)
T 2xdw_A 590 -------TIGHAWT----TDYGCS--DSK----QHFE----WLIKY---SPLHNVKLPEADDIQYPSMLLLTADHDDRVV 645 (710)
T ss_dssp -------TTGGGGH----HHHCCT--TSH----HHHH----HHHHH---CGGGCCCCCSSTTCCCCEEEEEEETTCCSSC
T ss_pred -------CCChhHH----HhCCCC--CCH----HHHH----HHHHh---CcHhhhcccccccCCCCcEEEEEeCCCCccC
Confidence 0000000 001111 000 0000 11111 1233444 6787 99999999999999
Q ss_pred hHHHHHHHhhcCC-----------cEEEEeCCCCCccccc--ChHHHHHHHHHHHHhhc
Q psy4974 298 TQQVQSLLNQLKF-----------CQYYQFSSGGHSCHIK--HGQVFNEISRNFILEEN 343 (345)
Q Consensus 298 ~~~~~~~~~~~~~-----------~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~~ 343 (345)
+..+.++.+.++. +++++++++||.+... ++.+..+.+.+||.++.
T Consensus 646 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 704 (710)
T 2xdw_A 646 PLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCL 704 (710)
T ss_dssp THHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 8888888776643 4889999999998653 45678889999998754
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=9.8e-19 Score=158.45 Aligned_cols=178 Identities=12% Similarity=0.085 Sum_probs=120.8
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC-----------CCCCC---C
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK-----------GRSFV---P 157 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~-----------~~~~~---~ 157 (345)
+.|+||++||++++ ...|..+++.|+++||.|+++|+|| +|.+... ...+. .
T Consensus 97 ~~P~Vv~~HG~~~~-~~~~~~~a~~La~~Gy~V~~~d~~g-------------~g~s~~~~~~~~~~~~~~~~~~~~~~~ 162 (383)
T 3d59_A 97 KYPLVVFSHGLGAF-RTLYSAIGIDLASHGFIVAAVEHRD-------------RSASATYYFKDQSAAEIGDKSWLYLRT 162 (383)
T ss_dssp CEEEEEEECCTTCC-TTTTHHHHHHHHHTTCEEEEECCCS-------------SCSSEEEECSSHHHHHHTCCEEEECCC
T ss_pred CCCEEEEcCCCCCC-chHHHHHHHHHHhCceEEEEeccCC-------------CCccceeecCCccccccCCceeeeccc
Confidence 34789999999999 4899999999999999999999999 8776310 00000 0
Q ss_pred --c--------cchHHHHHHHHHHHHHh--------------------------CCccEEEEEeChhHHHHHHHHHhCCc
Q psy4974 158 --F--------QYIEEDVDIAYELLKLL--------------------------GVCKVSLFGWCDGGHLSFVFSMKYPH 201 (345)
Q Consensus 158 --~--------~~~~~~~~~~~~~l~~~--------------------------~~~~i~lvGhS~Gg~ia~~~a~~~p~ 201 (345)
. ..+...++++...++.+ +.+++.++|||+||.+|+.++...+
T Consensus 163 ~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~- 241 (383)
T 3d59_A 163 LKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ- 241 (383)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-
T ss_pred cCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-
Confidence 0 01122234444444332 2348999999999999999988775
Q ss_pred ccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCC
Q psy4974 202 MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYV 281 (345)
Q Consensus 202 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 281 (345)
+++++|++++...... ...+.++
T Consensus 242 ~v~a~v~~~~~~~p~~---------------------------------------------------------~~~~~~i 264 (383)
T 3d59_A 242 RFRCGIALDAWMFPLG---------------------------------------------------------DEVYSRI 264 (383)
T ss_dssp TCCEEEEESCCCTTCC---------------------------------------------------------GGGGGSC
T ss_pred CccEEEEeCCccCCCc---------------------------------------------------------hhhhccC
Confidence 6999999987533100 0112457
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHh---hcCCcEEEEeCCCCCccccc-------------------Ch----HHHHHHH
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLN---QLKFCQYYQFSSGGHSCHIK-------------------HG----QVFNEIS 335 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~-------------------~~----~~~~~~i 335 (345)
++|+|+++|++|..++ ..+.+.+ .....+++++++++|..+.+ ++ +.+.+.+
T Consensus 265 ~~P~Lii~g~~D~~~~--~~~~~~~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 342 (383)
T 3d59_A 265 PQPLFFINSEYFQYPA--NIIKMKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKAS 342 (383)
T ss_dssp CSCEEEEEETTTCCHH--HHHHHHTTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHH
T ss_pred CCCEEEEecccccchh--hHHHHHHHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHH
Confidence 8899999999997543 2333322 22467899999999987432 23 3445678
Q ss_pred HHHHHhhc
Q psy4974 336 RNFILEEN 343 (345)
Q Consensus 336 ~~fl~~~~ 343 (345)
.+||+++.
T Consensus 343 ~~Fl~~~L 350 (383)
T 3d59_A 343 LAFLQKHL 350 (383)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 88998764
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-19 Score=157.13 Aligned_cols=104 Identities=15% Similarity=0.152 Sum_probs=80.1
Q ss_pred ceEEEEcCcCCCch--hhHHHHHHhhCCC--CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIR--NSFKKQLTAFDPK--LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 94 p~vv~lHG~~~~~~--~~~~~~~~~L~~~--G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
+||||+||++++.. ..|..+.+.|.+. |++|+++|+ | ||.|......+ ..++.+.++++.
T Consensus 6 ~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G-------------~g~s~~~~~~~--~~~~~~~~~~~~ 69 (279)
T 1ei9_A 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-G-------------KTLREDVENSF--FLNVNSQVTTVC 69 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-S-------------SSHHHHHHHHH--HSCHHHHHHHHH
T ss_pred CcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-C-------------CCCcccccccc--ccCHHHHHHHHH
Confidence 57999999998721 5899999999875 779999998 9 99774211111 125566677777
Q ss_pred HHHHHhC-C-ccEEEEEeChhHHHHHHHHHhCCc-ccceeeEeccCC
Q psy4974 170 ELLKLLG-V-CKVSLFGWCDGGHLSFVFSMKYPH-MVHKLVIWGTKS 213 (345)
Q Consensus 170 ~~l~~~~-~-~~i~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~ 213 (345)
+.++... . ++++++||||||.+|..++.++|+ +|+++|+++++.
T Consensus 70 ~~l~~~~~l~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 70 QILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp HHHHSCGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred HHHHhhhhccCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCcc
Confidence 6666521 1 689999999999999999999998 499999998743
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=8.4e-18 Score=145.43 Aligned_cols=182 Identities=13% Similarity=0.118 Sum_probs=120.8
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCC--CeEEEEeCCCCchhhhccCCccCCCCCCC-------CCCCCCCCccchH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPK--LFTSIFWDPPGNVVLYLLGKTCSGYGQSL-------PKGRSFVPFQYIE 162 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~--G~~vi~~D~~G~~~~~~~g~~~~~~G~s~-------~~~~~~~~~~~~~ 162 (345)
..|.|||+||+|++. ..|..+++.|..+ ++.+++++-|.. ....| .|.+- ...... ..+.+.
T Consensus 65 ~~plVI~LHG~G~~~-~~~~~~~~~l~~~~~~~~~v~P~Ap~~--~~~~~-----~G~~Wfd~~~~~~~~~~~-~~~~~~ 135 (285)
T 4fhz_A 65 ATSLVVFLHGYGADG-ADLLGLAEPLAPHLPGTAFVAPDAPEP--CRANG-----FGFQWFPIPWLDGSSETA-AAEGMA 135 (285)
T ss_dssp CSEEEEEECCTTBCH-HHHHTTHHHHGGGSTTEEEEEECCSEE--CTTSS-----SCEESSCCHHHHCCCHHH-HHHHHH
T ss_pred CCcEEEEEcCCCCCH-HHHHHHHHHHHHhCCCeEEEecCCCcc--cccCC-----CcccccccccccCcccch-hhHHHH
Confidence 347899999999994 8888888887654 689999886530 00000 22210 000000 111222
Q ss_pred HHHHHHHHHH----HHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhh
Q psy4974 163 EDVDIAYELL----KLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMA 236 (345)
Q Consensus 163 ~~~~~~~~~l----~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (345)
+.++++.+++ ...++ ++++++|+|+||.+|+.++.++|+++.++|.+++.......
T Consensus 136 ~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~~------------------ 197 (285)
T 4fhz_A 136 AAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPER------------------ 197 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHHH------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCchh------------------
Confidence 2334444443 34454 48999999999999999999999999999998874321100
Q ss_pred HHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcE
Q psy4974 237 RSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQ 312 (345)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~ 312 (345)
.......+.|++++||++|.+||.+.++++.+.+ .+++
T Consensus 198 --------------------------------------~~~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~ 239 (285)
T 4fhz_A 198 --------------------------------------LAEEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTY 239 (285)
T ss_dssp --------------------------------------HHHHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEE
T ss_pred --------------------------------------hhhhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEE
Confidence 0000124679999999999999998888877665 3578
Q ss_pred EEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 313 YYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 313 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
++++++.||.+. +++ .+.+.+||+++
T Consensus 240 ~~~y~g~gH~i~---~~~-l~~~~~fL~~~ 265 (285)
T 4fhz_A 240 GHVMKGTGHGIA---PDG-LSVALAFLKER 265 (285)
T ss_dssp EEEETTCCSSCC---HHH-HHHHHHHHHHH
T ss_pred EEEECCCCCCCC---HHH-HHHHHHHHHHH
Confidence 999999999874 333 45678888765
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-17 Score=150.15 Aligned_cols=106 Identities=16% Similarity=0.094 Sum_probs=77.0
Q ss_pred CceEEEEcCcCCCchhh-----------HHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCc---
Q psy4974 93 AQVLFFTYGVLGEIRNS-----------FKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPF--- 158 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~-----------~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~--- 158 (345)
.|+||++||++++. .. |..++..|.++||.|+++|+|| ||.|......+ ..
T Consensus 79 ~P~vv~~HG~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G-------------~G~s~~~~~~~-~~~~~ 143 (397)
T 3h2g_A 79 YPLLGWGHPTEALR-AQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLG-------------LGKSNYAYHPY-LHSAS 143 (397)
T ss_dssp EEEEEEECCCCCBT-TCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTT-------------STTCCCSSCCT-TCHHH
T ss_pred CcEEEEeCCCcCCC-CcccccccccccchHHHHHHHHHCCCEEEEecCCC-------------CCCCCCCccch-hhhhh
Confidence 37889999998873 33 5678889999999999999999 99986443333 11
Q ss_pred --cchHHHHHHHHHHHHHhCC---ccEEEEEeChhHHHHHHHHHhC-Cc-----ccceeeEeccCC
Q psy4974 159 --QYIEEDVDIAYELLKLLGV---CKVSLFGWCDGGHLSFVFSMKY-PH-----MVHKLVIWGTKS 213 (345)
Q Consensus 159 --~~~~~~~~~~~~~l~~~~~---~~i~lvGhS~Gg~ia~~~a~~~-p~-----~v~~lvl~~~~~ 213 (345)
..+.+.++++..+++.+++ ++++++|||+||.+++.+|... ++ .+.+++..+++.
T Consensus 144 ~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~ 209 (397)
T 3h2g_A 144 EASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPY 209 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccccc
Confidence 2344556666777788876 6999999999999998887332 21 455666555543
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.76 E-value=3.3e-17 Score=159.86 Aligned_cols=210 Identities=13% Similarity=0.079 Sum_probs=129.2
Q ss_pred HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC---------------
Q psy4974 113 QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGV--------------- 177 (345)
Q Consensus 113 ~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------------- 177 (345)
+...|+++||.|+++|.|| +|.|+.....+ . ...++|+.++++.+..
T Consensus 273 ~~~~la~~GYaVv~~D~RG-------------~G~S~G~~~~~----~-~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~ 334 (763)
T 1lns_A 273 LNDYFLTRGFASIYVAGVG-------------TRSSDGFQTSG----D-YQQIYSMTAVIDWLNGRARAYTSRKKTHEIK 334 (763)
T ss_dssp HHHHHHTTTCEEEEECCTT-------------STTSCSCCCTT----S-HHHHHHHHHHHHHHTTSSCEESSTTCCCEEC
T ss_pred hHHHHHHCCCEEEEECCCc-------------CCCCCCcCCCC----C-HHHHHHHHHHHHHHhhccccccccccccccc
Confidence 3467888999999999999 99997654332 2 2456777777777651
Q ss_pred -----ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh---HhccCCChhhHHHH-HHHcccCC
Q psy4974 178 -----CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM---RRLSNWSPMARSEV-LKAYDNDV 248 (345)
Q Consensus 178 -----~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~ 248 (345)
.+|.++|||+||.+++.+|..+|+.++++|..++...... .+... .....+.......+ ...+....
T Consensus 335 q~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~----~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~ 410 (763)
T 1lns_A 335 ASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYN----YYRENGLVRSPGGFPGEDLDVLAALTYSRNL 410 (763)
T ss_dssp CTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHH----HHBSSSSBCCCTTCTTCCHHHHHHHHCGGGG
T ss_pred ccCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHH----HhhhcchhhhcccCCchhhhHHhHHHHhhhc
Confidence 3899999999999999999999999999999988653110 00000 00000000000000 00111100
Q ss_pred --chh---hhhHHHHHHHHHHHH--------HhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC--cEE
Q psy4974 249 --NYI---TGIFNQYVDMVNLIF--------KSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF--CQY 313 (345)
Q Consensus 249 --~~~---~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~--~~~ 313 (345)
... ...+......+.... ..+........+.+|++|+|+++|..|..+|+..+.++.+.+++ ...
T Consensus 411 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~~~~ 490 (763)
T 1lns_A 411 DGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKH 490 (763)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEE
T ss_pred CcchhhhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCCCeE
Confidence 000 001111111111100 00011223456778999999999999999999999999998874 344
Q ss_pred EEeCCCCCccccc-ChHHHHHHHHHHHHhhcc
Q psy4974 314 YQFSSGGHSCHIK-HGQVFNEISRNFILEENK 344 (345)
Q Consensus 314 ~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~~k 344 (345)
.++.++||..+.+ .+..+.+.+.+||++..|
T Consensus 491 l~i~~~gH~~~~~~~~~~~~~~i~~Ffd~~Lk 522 (763)
T 1lns_A 491 AFLHRGAHIYMNSWQSIDFSETINAYFVAKLL 522 (763)
T ss_dssp EEEESCSSCCCTTBSSCCHHHHHHHHHHHHHT
T ss_pred EEEeCCcccCccccchHHHHHHHHHHHHHHhc
Confidence 4556799987654 566778888888877654
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-17 Score=161.56 Aligned_cols=225 Identities=13% Similarity=0.057 Sum_probs=135.3
Q ss_pred cCceEEEEEc---C----CCCceEEEEcCcCCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 80 KGCDIRFIKY---G----SGAQVLFFTYGVLGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 80 ~g~~l~~~~~---g----~~~p~vv~lHG~~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
+|..|.+... + ...|+||++||+.+.. ...|......|.++||.|+++|+|| .|.....
T Consensus 434 dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG-------------~g~~g~~ 500 (693)
T 3iuj_A 434 DGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRG-------------GGEYGQA 500 (693)
T ss_dssp TSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTT-------------SSTTCHH
T ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCC-------------CCccCHH
Confidence 6777765542 1 2347999999986642 2445666667777899999999999 6654211
Q ss_pred -----CCCCCCccchHHHHHHHHHHHHH--hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHH
Q psy4974 152 -----GRSFVPFQYIEEDVDIAYELLKL--LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFE 224 (345)
Q Consensus 152 -----~~~~~~~~~~~~~~~~~~~~l~~--~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 224 (345)
.... ....+++..+.+..+++. ...+++.++|||+||++++.++.++|++++++|+..|.........
T Consensus 501 ~~~~~~~~~-~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~---- 575 (693)
T 3iuj_A 501 WHLAGTQQN-KQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHT---- 575 (693)
T ss_dssp HHHTTSGGG-THHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGG----
T ss_pred HHHhhhhhc-CCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhcc----
Confidence 0011 111233444444444433 1235899999999999999999999999999999998765322110
Q ss_pred HhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCC-CCCC-EEEEEeCCCCCCChHHHH
Q psy4974 225 GMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPY-VDVP-VLVFHSADDVMVSTQQVQ 302 (345)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P-vl~i~G~~D~~v~~~~~~ 302 (345)
......+ . ..++.. ..... .. ..+.. ......+.. +++| +|+++|++|..||+..+.
T Consensus 576 -~~~~~~~----~----~~~g~p--~~~~~---~~----~~~~~---~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~ 634 (693)
T 3iuj_A 576 -FTAGTGW----A----YDYGTS--ADSEA---MF----DYLKG---YSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSF 634 (693)
T ss_dssp -SGGGGGC----H----HHHCCT--TSCHH---HH----HHHHH---HCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHH
T ss_pred -CCCchhH----H----HHcCCc--cCHHH---HH----HHHHh---cCHHHhhcccCCCCceeEEecCCCCCCChhHHH
Confidence 0000000 0 011111 00000 00 01111 112334556 7888 999999999999998888
Q ss_pred HHHhhcC-------CcEEEEeCCCCCcccc--cChHHHHHHHHHHHHhhc
Q psy4974 303 SLLNQLK-------FCQYYQFSSGGHSCHI--KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 303 ~~~~~~~-------~~~~~~~~~~gH~~~~--~~~~~~~~~i~~fl~~~~ 343 (345)
++.+.++ .+.+++++++||.+.. ++..+..+.+.+||.++.
T Consensus 635 ~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 684 (693)
T 3iuj_A 635 KFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEM 684 (693)
T ss_dssp HHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHc
Confidence 8877663 3578999999998765 456778888999998764
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.1e-17 Score=138.88 Aligned_cols=201 Identities=12% Similarity=0.049 Sum_probs=126.8
Q ss_pred CceEEEEcCcCCCchhhHHH--HHHhh-CCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKK--QLTAF-DPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~--~~~~L-~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
.|+||++||++++. ..|.. .+..+ .+.|+.|+++|+++ .+.+..+. ........++++.
T Consensus 41 ~p~vv~~HG~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~~~~~----~~~~~~~~~~~~~ 102 (263)
T 2uz0_A 41 IPVLYLLHGMSGNH-NSWLKRTNVERLLRGTNLIVVMPNTSN-------------GWYTDTQY----GFDYYTALAEELP 102 (263)
T ss_dssp BCEEEEECCTTCCT-THHHHHSCHHHHTTTCCCEEEECCCTT-------------STTSBCTT----SCBHHHHHHTHHH
T ss_pred CCEEEEECCCCCCH-HHHHhccCHHHHHhcCCeEEEEECCCC-------------CccccCCC----cccHHHHHHHHHH
Confidence 47899999999985 88887 45555 45689999999988 76654332 2223556677888
Q ss_pred HHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHH
Q psy4974 170 ELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKA 243 (345)
Q Consensus 170 ~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
.+++.. +.++++++|||+||.+|+.+|. +|++++++|++++.......... . ...+.. ......
T Consensus 103 ~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~~~----~--~~~~~~---~~~~~~ 172 (263)
T 2uz0_A 103 QVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFSPE----S--QNLGSP---AYWRGV 172 (263)
T ss_dssp HHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCCGG----G--TTCSCH---HHHHHH
T ss_pred HHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhcccc----c--cccccc---hhHHHH
Confidence 888774 2368999999999999999999 99999999999997654321110 0 000000 111112
Q ss_pred cccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCC--CCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEEEEeC
Q psy4974 244 YDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYV--DVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQYYQFS 317 (345)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~~~~~ 317 (345)
+..... . .....+....+.++ .+|+++++|++|.+++ ..+.+.+.+ .+.++.+++
T Consensus 173 ~~~~~~---~--------------~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~ 233 (263)
T 2uz0_A 173 FGEIRD---W--------------TTSPYSLESLAKKSDKKTKLWAWCGEQDFLYE--ANNLAVKNLKKLGFDVTYSHSA 233 (263)
T ss_dssp HCCCSC---T--------------TTSTTSHHHHGGGCCSCSEEEEEEETTSTTHH--HHHHHHHHHHHTTCEEEEEEES
T ss_pred cCChhh---h--------------ccccCCHHHHHHhccCCCeEEEEeCCCchhhH--HHHHHHHHHHHCCCCeEEEECC
Confidence 221100 0 00001111112222 2799999999999885 234444443 246889999
Q ss_pred CCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 318 SGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 318 ~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+ ||.... .++..+.+.+||.+..
T Consensus 234 g-~H~~~~--~~~~~~~~~~~l~~~l 256 (263)
T 2uz0_A 234 G-THEWYY--WEKQLEVFLTTLPIDF 256 (263)
T ss_dssp C-CSSHHH--HHHHHHHHHHHSSSCC
T ss_pred C-CcCHHH--HHHHHHHHHHHHHhhc
Confidence 8 997642 2355677888887654
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.4e-17 Score=142.75 Aligned_cols=217 Identities=11% Similarity=0.009 Sum_probs=123.9
Q ss_pred CceEEEEcCcCCCchhhHHH---HHHhhCCCCeEEEEeCCCCchhhhccCCc-cCCCCCCCC---CCCCCCCccc-hHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKK---QLTAFDPKLFTSIFWDPPGNVVLYLLGKT-CSGYGQSLP---KGRSFVPFQY-IEED 164 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~~~~~~~g~~-~~~~G~s~~---~~~~~~~~~~-~~~~ 164 (345)
.|+||++||++++. ..|.. +...+.+.|+.|+++|.++++.-...... ..++|.+.. +...+..... ....
T Consensus 51 ~p~vv~lHG~~~~~-~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~ 129 (283)
T 4b6g_A 51 LGVIYWLSGLTCTE-QNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYI 129 (283)
T ss_dssp EEEEEEECCTTCCS-HHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHH
T ss_pred CCEEEEEcCCCCCc-cchhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCCcccccCccCcccchhhHHHHH
Confidence 37999999999985 77743 34555566899999998651110000000 001222210 0011000001 3333
Q ss_pred HHHHHHHHHHh--CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHH
Q psy4974 165 VDIAYELLKLL--GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLK 242 (345)
Q Consensus 165 ~~~~~~~l~~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (345)
++++..+++.. ..++++|+|||+||.+|+.+|.++|++++++++++|......... ....+..
T Consensus 130 ~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~~---------------~~~~~~~ 194 (283)
T 4b6g_A 130 LNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLVPW---------------GEKAFTA 194 (283)
T ss_dssp HTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCGGGSHH---------------HHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccccccCcc---------------hhhhHHh
Confidence 56777777765 236899999999999999999999999999999999765322110 0011111
Q ss_pred HcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChH-----HHHHHHhhcCCcEEEEeC
Q psy4974 243 AYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ-----QVQSLLNQLKFCQYYQFS 317 (345)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~-----~~~~~~~~~~~~~~~~~~ 317 (345)
.+.... ..+.. .........+. ...|+++++|+.|.+++.. ..+.+.+.-.++++.+++
T Consensus 195 ~~g~~~----~~~~~-----------~~~~~~~~~~~-~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 258 (283)
T 4b6g_A 195 YLGKDR----EKWQQ-----------YDANSLIQQGY-KVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHK 258 (283)
T ss_dssp HHCSCG----GGGGG-----------GCHHHHHHHTC-CCSCCEEEEETTCTTHHHHTCHHHHHHHHHHHTCCCEEEEET
T ss_pred hcCCch----HHHHh-----------cCHHHHHHhcc-cCCCEEEEecCCCccCcchhhHHHHHHHHHHcCCCceEEEeC
Confidence 222110 00000 00000011111 3469999999999998752 233333333468999999
Q ss_pred CCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 318 SGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 318 ~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+++|.... .....+...+|+.+..
T Consensus 259 g~~H~~~~--~~~~l~~~l~~~~~~l 282 (283)
T 4b6g_A 259 GYDHSYYF--IASFIGEHIAYHAAFL 282 (283)
T ss_dssp TCCSSHHH--HHHHHHHHHHHHHTTC
T ss_pred CCCcCHhH--HHHHHHHHHHHHHHhc
Confidence 99997532 3345566777877654
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-16 Score=144.54 Aligned_cols=190 Identities=16% Similarity=0.242 Sum_probs=127.7
Q ss_pred cCceEEEEEcCC-------CCceEEEEcCcCCCchhhHHHH-----------HHhhCCCCeEEEEeCCCCchhhhccCCc
Q psy4974 80 KGCDIRFIKYGS-------GAQVLFFTYGVLGEIRNSFKKQ-----------LTAFDPKLFTSIFWDPPGNVVLYLLGKT 141 (345)
Q Consensus 80 ~g~~l~~~~~g~-------~~p~vv~lHG~~~~~~~~~~~~-----------~~~L~~~G~~vi~~D~~G~~~~~~~g~~ 141 (345)
+|..+.|..+.+ +.|+||++||++++....+... .......|+.|+++|.+|
T Consensus 154 dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g---------- 223 (380)
T 3doh_A 154 TGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPP---------- 223 (380)
T ss_dssp TCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCT----------
T ss_pred CCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCC----------
Confidence 677888876532 2278999999986631111111 112335568999999998
Q ss_pred cCCCCCCCCC----CCCCCCccchHHHHHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 142 CSGYGQSLPK----GRSFVPFQYIEEDVDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 142 ~~~~G~s~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
.+..... ...........+..+.+..+++..+.+ +++|+|||+||.+|+.++.++|+++++++++++...
T Consensus 224 ---~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~- 299 (380)
T 3doh_A 224 ---NSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGD- 299 (380)
T ss_dssp ---TCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC-
T ss_pred ---CCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCC-
Confidence 4322110 000001224555566666777777654 799999999999999999999999999999998741
Q ss_pred CchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCC-CCCEEEEEeCCCC
Q psy4974 216 TIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYV-DVPVLVFHSADDV 294 (345)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvl~i~G~~D~ 294 (345)
...+..+ ++|+|+++|++|.
T Consensus 300 -----------------------------------------------------------~~~~~~~~~~P~lii~G~~D~ 320 (380)
T 3doh_A 300 -----------------------------------------------------------VSKVERIKDIPIWVFHAEDDP 320 (380)
T ss_dssp -----------------------------------------------------------GGGGGGGTTSCEEEEEETTCS
T ss_pred -----------------------------------------------------------hhhhhhccCCCEEEEecCCCC
Confidence 0111122 3799999999999
Q ss_pred CCChHHHHHHHhhcC----CcEEEEeCCC--------CCcccccChHHHHHHHHHHHHhhcc
Q psy4974 295 MVSTQQVQSLLNQLK----FCQYYQFSSG--------GHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 295 ~v~~~~~~~~~~~~~----~~~~~~~~~~--------gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
++|.+.++.+.+.+. +.++++++++ +|..+.+. .-.+.+.+||.++.|
T Consensus 321 ~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~~~~--~~~~~i~~wL~~~~r 380 (380)
T 3doh_A 321 VVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSWIPT--YENQEAIEWLFEQSR 380 (380)
T ss_dssp SSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTHHHH--HTCHHHHHHHHTCC-
T ss_pred ccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhHHHh--cCCHHHHHHHHhhcC
Confidence 999888888877663 5789999999 77543211 112378899987653
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.6e-17 Score=159.75 Aligned_cols=228 Identities=14% Similarity=0.087 Sum_probs=139.0
Q ss_pred cCceEEEEE---cC----CCCceEEEEcCcCCCch-hhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 80 KGCDIRFIK---YG----SGAQVLFFTYGVLGEIR-NSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 80 ~g~~l~~~~---~g----~~~p~vv~lHG~~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
+|..+.+.. .+ ...|+||++||+++... ..|......|+++||.|+++|+|| +|.+...
T Consensus 489 dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG-------------~g~~G~~ 555 (751)
T 2xe4_A 489 DQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRG-------------GSELGRA 555 (751)
T ss_dssp TCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTT-------------SCTTCTH
T ss_pred CCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCC-------------CCCcCcc
Confidence 777776433 22 23479999999877631 245555667778899999999999 7764211
Q ss_pred ----CCCC-CCccchHHHHHHHHHHHHH--hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHH
Q psy4974 152 ----GRSF-VPFQYIEEDVDIAYELLKL--LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFE 224 (345)
Q Consensus 152 ----~~~~-~~~~~~~~~~~~~~~~l~~--~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 224 (345)
.... .....+++.++.+..+++. ...+++.++|+|+||++++.++.++|++++++|+.+|.......
T Consensus 556 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~------ 629 (751)
T 2xe4_A 556 WYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTT------ 629 (751)
T ss_dssp HHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHH------
T ss_pred hhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhh------
Confidence 1100 0112344555555555544 23468999999999999999999999999999999886542110
Q ss_pred HhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCC-EEEEEeCCCCCCChHHHHH
Q psy4974 225 GMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVP-VLVFHSADDVMVSTQQVQS 303 (345)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vl~i~G~~D~~v~~~~~~~ 303 (345)
+. ....+...... ..+... .. .... ..+... .....+.++++| +|+++|++|..||+..+.+
T Consensus 630 -~~--~~~~~~~~~~~-~~~g~p-----~~-~~~~----~~~~~~---sp~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~ 692 (751)
T 2xe4_A 630 -MC--DPSIPLTTGEW-EEWGNP-----NE-YKYY----DYMLSY---SPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAK 692 (751)
T ss_dssp -HT--CTTSTTHHHHT-TTTCCT-----TS-HHHH----HHHHHH---CTGGGCCSSCCCEEEEEEETTCSSSCTHHHHH
T ss_pred -hc--ccCcccchhhH-HHcCCC-----CC-HHHH----HHHHhc---ChhhhhccCCCCceeEEeeCCCCCCCHHHHHH
Confidence 00 00000000000 001100 00 0000 111111 123456678897 9999999999999998888
Q ss_pred HHhhcCC-------cEEEEeCCCCCcccccChH--HHHHHHHHHHHhhc
Q psy4974 304 LLNQLKF-------CQYYQFSSGGHSCHIKHGQ--VFNEISRNFILEEN 343 (345)
Q Consensus 304 ~~~~~~~-------~~~~~~~~~gH~~~~~~~~--~~~~~i~~fl~~~~ 343 (345)
+.+.++. ..+.+++++||.+....++ +....+.+||.+..
T Consensus 693 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l 741 (751)
T 2xe4_A 693 WVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHL 741 (751)
T ss_dssp HHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHh
Confidence 8776642 2344559999998754433 34557889998754
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.7e-17 Score=136.91 Aligned_cols=201 Identities=16% Similarity=0.157 Sum_probs=127.2
Q ss_pred eEEEEEcC---CCCceEEEEcCcCCCchhhHHHHHHhhCCC--CeEEEEeCCCCchhhh---ccCCccCCCCCCCCC---
Q psy4974 83 DIRFIKYG---SGAQVLFFTYGVLGEIRNSFKKQLTAFDPK--LFTSIFWDPPGNVVLY---LLGKTCSGYGQSLPK--- 151 (345)
Q Consensus 83 ~l~~~~~g---~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~--G~~vi~~D~~G~~~~~---~~g~~~~~~G~s~~~--- 151 (345)
.+.|.... +.+++|||+||+|++. ..|..+++.|... ++.+++++-|-..... ..|.. -+......
T Consensus 24 ~l~y~ii~P~~~~~~~VI~LHG~G~~~-~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~--Wf~~~~~~~~~ 100 (246)
T 4f21_A 24 AMNYELMEPAKQARFCVIWLHGLGADG-HDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRA--WYDIKSLDANS 100 (246)
T ss_dssp CCCEEEECCSSCCCEEEEEEEC--CCC-CCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHS--CTTCCCC---C
T ss_pred CcCceEeCCCCcCCeEEEEEcCCCCCH-HHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCccc--ccccccccccc
Confidence 34454433 3346999999999995 8888888887643 5889998765311100 00111 01111100
Q ss_pred -CCCCCCccchHHHHHHHHHHHHH---h--CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHH
Q psy4974 152 -GRSFVPFQYIEEDVDIAYELLKL---L--GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEG 225 (345)
Q Consensus 152 -~~~~~~~~~~~~~~~~~~~~l~~---~--~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 225 (345)
.... +.+.+.+.++.+..+++. . ..++++++|+|+||.+|+.++.++|+.+.+++.+++.......
T Consensus 101 ~~~~~-d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~------- 172 (246)
T 4f21_A 101 LNRVV-DVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDN------- 172 (246)
T ss_dssp GGGGS-CCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHH-------
T ss_pred hhhhh-hHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCcccc-------
Confidence 0111 223344455555555543 2 3458999999999999999999999999999999885432100
Q ss_pred hHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHH
Q psy4974 226 MRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLL 305 (345)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~ 305 (345)
+... . .....++|++++||++|+++|.+.+++..
T Consensus 173 ------------------~~~~---------------------------~-~~~~~~~Pvl~~HG~~D~vVp~~~~~~~~ 206 (246)
T 4f21_A 173 ------------------FKGK---------------------------I-TSINKGLPILVCHGTDDQVLPEVLGHDLS 206 (246)
T ss_dssp ------------------HSTT---------------------------C-CGGGTTCCEEEEEETTCSSSCHHHHHHHH
T ss_pred ------------------cccc---------------------------c-cccccCCchhhcccCCCCccCHHHHHHHH
Confidence 0000 0 00112579999999999999998888877
Q ss_pred hhcC----CcEEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 306 NQLK----FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 306 ~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
+.+. ++++..+++.||.+. +++ .+.+.+||++..|
T Consensus 207 ~~L~~~g~~v~~~~y~g~gH~i~---~~~-l~~~~~fL~k~l~ 245 (246)
T 4f21_A 207 DKLKVSGFANEYKHYVGMQHSVC---MEE-IKDISNFIAKTFK 245 (246)
T ss_dssp HHHHTTTCCEEEEEESSCCSSCC---HHH-HHHHHHHHHHHTT
T ss_pred HHHHHCCCCeEEEEECCCCCccC---HHH-HHHHHHHHHHHhC
Confidence 7663 568899999999875 344 4668899988754
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-16 Score=153.33 Aligned_cols=224 Identities=17% Similarity=0.102 Sum_probs=139.3
Q ss_pred cCceEEEEEc---C----CCCceEEEEcCcCCCc-hhhHHHHH-HhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 80 KGCDIRFIKY---G----SGAQVLFFTYGVLGEI-RNSFKKQL-TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 80 ~g~~l~~~~~---g----~~~p~vv~lHG~~~~~-~~~~~~~~-~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
+|..+.+... + ...|+||++||+++.. ...|.... +.|.++||.|+.+|+|| .|....
T Consensus 458 DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RG-------------sg~~G~ 524 (711)
T 4hvt_A 458 DGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRG-------------GGEFGP 524 (711)
T ss_dssp TSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTT-------------SSTTCH
T ss_pred CCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCC-------------CCCcch
Confidence 7887775432 2 2348999999986652 12343333 47888899999999999 665421
Q ss_pred C-----CCCCCCccchHHHHHHHHHHHHHh--CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHH
Q psy4974 151 K-----GRSFVPFQYIEEDVDIAYELLKLL--GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVF 223 (345)
Q Consensus 151 ~-----~~~~~~~~~~~~~~~~~~~~l~~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 223 (345)
. .... ....+++..+.+..+++.- ..+++.++|+|+||++++.++.++|++++++|+..|.........
T Consensus 525 ~~~~~~~~~~-~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~--- 600 (711)
T 4hvt_A 525 EWHKSAQGIK-RQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKE--- 600 (711)
T ss_dssp HHHHTTSGGG-THHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGG---
T ss_pred hHHHhhhhcc-CcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhc---
Confidence 1 1111 1112333333333333331 225899999999999999999999999999999988765422110
Q ss_pred HHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCC--CEEEEEeCCCCCCChHHH
Q psy4974 224 EGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDV--PVLVFHSADDVMVSTQQV 301 (345)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~--Pvl~i~G~~D~~v~~~~~ 301 (345)
. ...... . ..++.. .... . ...+.. ......+.++++ |+|+++|++|..||+..+
T Consensus 601 --~----~~~~~~---~-~~~G~p--~~~~----~----~~~l~~---~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s 657 (711)
T 4hvt_A 601 --F----GAGHSW---V-TEYGDP--EIPN----D----LLHIKK---YAPLENLSLTQKYPTVLITDSVLDQRVHPWHG 657 (711)
T ss_dssp --S----TTGGGG---H-HHHCCT--TSHH----H----HHHHHH---HCGGGSCCTTSCCCEEEEEEETTCCSSCTHHH
T ss_pred --c----ccchHH---H-HHhCCC--cCHH----H----HHHHHH---cCHHHHHhhcCCCCCEEEEecCCCCcCChHHH
Confidence 0 000000 0 011111 0000 0 011111 122445666776 999999999999999998
Q ss_pred HHHHhhc-----CCcEEEEeCCCCCcccc--cChHHHHHHHHHHHHhhc
Q psy4974 302 QSLLNQL-----KFCQYYQFSSGGHSCHI--KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 302 ~~~~~~~-----~~~~~~~~~~~gH~~~~--~~~~~~~~~i~~fl~~~~ 343 (345)
.++.+.+ ..+++++++++||.+.. ++.....+.+.+||.++.
T Consensus 658 ~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~L 706 (711)
T 4hvt_A 658 RIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANAL 706 (711)
T ss_dssp HHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHHh
Confidence 8888877 35789999999998754 234455667889998764
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=4.7e-17 Score=140.99 Aligned_cols=103 Identities=16% Similarity=0.157 Sum_probs=84.5
Q ss_pred CceEEEEcCcCCCchhhHH-HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFK-KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~-~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
+++|||+||++++....|. .+.+.|.++||+|+++|+|| ||.++.. ...++..+.+.++
T Consensus 65 ~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG-------------~G~~~~~-------~~~~~la~~I~~l 124 (316)
T 3icv_A 65 SKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPP-------------FMLNDTQ-------VNTEYMVNAITTL 124 (316)
T ss_dssp SSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTT-------------TTCSCHH-------HHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCC-------------CCCCcHH-------HHHHHHHHHHHHH
Confidence 4689999999998436898 89999998899999999999 9876211 1345566677777
Q ss_pred HHHhCCccEEEEEeChhHHHHHHHHHhC---CcccceeeEeccCCCC
Q psy4974 172 LKLLGVCKVSLFGWCDGGHLSFVFSMKY---PHMVHKLVIWGTKSFL 215 (345)
Q Consensus 172 l~~~~~~~i~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~ 215 (345)
++..+.++++|+||||||.++..++..+ +++|+++|+++++...
T Consensus 125 ~~~~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~G 171 (316)
T 3icv_A 125 YAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKG 171 (316)
T ss_dssp HHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTC
T ss_pred HHHhCCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCCC
Confidence 8888889999999999999998877765 5899999999997654
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.3e-16 Score=137.19 Aligned_cols=128 Identities=14% Similarity=0.073 Sum_probs=81.8
Q ss_pred EcCceEEEEE--c-C--CCCceEEEEcCcCCCchhhH-HHHHHhhCCCCeEEEEeCCCCchh--hhccCCccCCC--CCC
Q psy4974 79 IKGCDIRFIK--Y-G--SGAQVLFFTYGVLGEIRNSF-KKQLTAFDPKLFTSIFWDPPGNVV--LYLLGKTCSGY--GQS 148 (345)
Q Consensus 79 ~~g~~l~~~~--~-g--~~~p~vv~lHG~~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~~~--~~~~g~~~~~~--G~s 148 (345)
.+|..+.+.. . + +..|+||++||++++. ..| ..+.+.|.+.||.|+++|+|+... ...- . .++ |.|
T Consensus 35 ~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~--~-~g~~~g~s 110 (304)
T 3d0k_A 35 NADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNG-ADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESY--N-NGRAFTAA 110 (304)
T ss_dssp CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCH-HHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHT--T-TTTCBCTT
T ss_pred CCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCH-HHHHHHHHHHHHHCCcEEEEeCCccccCCCcccc--c-cCcccccc
Confidence 4555565542 2 2 2347999999999995 777 667788888899999999994100 0000 0 004 555
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHH-h--CCccEEEEEeChhHHHHHHHHHhCCc-ccceeeEeccCC
Q psy4974 149 LPKGRSFVPFQYIEEDVDIAYELLKL-L--GVCKVSLFGWCDGGHLSFVFSMKYPH-MVHKLVIWGTKS 213 (345)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~--~~~~i~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~ 213 (345)
..+. .. ....+.+ +.++.+.+.. . ..++++|+|||+||.+++.++.++|+ +++++|+.+++.
T Consensus 111 ~~~~-~~-~~~~~~~-~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~ 176 (304)
T 3d0k_A 111 GNPR-HV-DGWTYAL-VARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGW 176 (304)
T ss_dssp SCBC-CG-GGSTTHH-HHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSS
T ss_pred CCCC-cc-cchHHHH-HHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcc
Confidence 4321 11 1123333 3333333333 2 35699999999999999999999995 789999887544
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=3.5e-17 Score=149.00 Aligned_cols=166 Identities=14% Similarity=0.096 Sum_probs=122.2
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCe---EEEEeCCCCchhhhccCCccCCCCCC-----CCCCCC---------
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLF---TSIFWDPPGNVVLYLLGKTCSGYGQS-----LPKGRS--------- 154 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~---~vi~~D~~G~~~~~~~g~~~~~~G~s-----~~~~~~--------- 154 (345)
..++|||+||++++. ..|..+++.|.++|| +|+++|+|| +|.| +.....
T Consensus 21 ~~ppVVLlHG~g~s~-~~w~~la~~La~~Gy~~~~Via~DlpG-------------~G~S~~~~~Dv~~~G~~~~~G~n~ 86 (484)
T 2zyr_A 21 DFRPVVFVHGLAGSA-GQFESQGMRFAANGYPAEYVKTFEYDT-------------ISWALVVETDMLFSGLGSEFGLNI 86 (484)
T ss_dssp CCCCEEEECCTTCCG-GGGHHHHHHHHHTTCCGGGEEEECCCH-------------HHHHHHTTTSTTTTTGGGHHHHHH
T ss_pred CCCEEEEECCCCCCH-HHHHHHHHHHHHcCCCcceEEEEECCC-------------CCcccccccccccccccccccccc
Confidence 346899999999995 999999999999999 799999999 8865 110000
Q ss_pred ------------------CCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCC
Q psy4974 155 ------------------FVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKS 213 (345)
Q Consensus 155 ------------------~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~ 213 (345)
.......++.++++.+++++++.++++++||||||.+++.++.++| ++|+++|+++++.
T Consensus 87 ~p~id~~~l~~v~~~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~ 166 (484)
T 2zyr_A 87 SQIIDPETLDKILSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVW 166 (484)
T ss_dssp GGGSCHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCC
T ss_pred ccccccccccccccccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCcc
Confidence 0011234556677778888889899999999999999999999998 4899999999865
Q ss_pred CCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCC
Q psy4974 214 FLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADD 293 (345)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D 293 (345)
... + ...++++.+.|+.|
T Consensus 167 ~~d-------------------------------------------------------------~-p~g~~~L~ilG~~d 184 (484)
T 2zyr_A 167 GVD-------------------------------------------------------------A-PEGIPTLAVFGNPK 184 (484)
T ss_dssp SEE-------------------------------------------------------------C-CTTSCEEEEEECGG
T ss_pred ccc-------------------------------------------------------------c-CcCCHHHHHhCCCC
Confidence 310 0 01345666666554
Q ss_pred C----CCChHHHHHHHhhcC-CcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 294 V----MVSTQQVQSLLNQLK-FCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 294 ~----~v~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
. ..+. ..++ +.+.+++++++|..+.++++.+. .+.+||..
T Consensus 185 ~~p~V~~ps-------s~L~~ga~~v~i~~a~H~~ll~dp~v~~-~Vl~fL~~ 229 (484)
T 2zyr_A 185 ALPALGLPE-------EKVVYNATNVYFNNMTHVQLCTSPETFA-VMFEFING 229 (484)
T ss_dssp GSCCSSCCS-------SCCEETSEEEEETTCCHHHHHHCHHHHH-HHHHHHHS
T ss_pred cCCcccChh-------HhcCCCceEEEECCCCccccccCHHHHH-HHHHHhcc
Confidence 3 1111 1345 77888899999999988887665 58889875
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=7.3e-15 Score=131.84 Aligned_cols=228 Identities=14% Similarity=0.091 Sum_probs=128.2
Q ss_pred CceEEEEcCcCCCchhh--------HHHHHHhhC-CCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCc----c
Q psy4974 93 AQVLFFTYGVLGEIRNS--------FKKQLTAFD-PKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPF----Q 159 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~--------~~~~~~~L~-~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~----~ 159 (345)
.|.|++.||..+.. .. -..++..|+ ++||.|+++|+|| +|.|......|... .
T Consensus 74 ~PvV~~~HG~~~~~-~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG-------------~G~s~~~~~~~~~~~~~~~ 139 (377)
T 4ezi_A 74 VGIISYQHGTRFER-NDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLG-------------LGDNELTLHPYVQAETLAS 139 (377)
T ss_dssp EEEEEEECCCCCST-TCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTT-------------STTCCCSSCCTTCHHHHHH
T ss_pred CcEEEEeCCCcCCc-ccCCCcCcccchHHHHHHHHhCCcEEEEeCCCC-------------CCCCCCCCcccccchhHHH
Confidence 37899999987531 11 113455677 8899999999999 99987533333111 1
Q ss_pred chHHHHHHHHHHHHHhCC---ccEEEEEeChhHHHHHHHHHhCCc-----ccceeeEeccCCCCCchhHHHH--------
Q psy4974 160 YIEEDVDIAYELLKLLGV---CKVSLFGWCDGGHLSFVFSMKYPH-----MVHKLVIWGTKSFLTIDNVRVF-------- 223 (345)
Q Consensus 160 ~~~~~~~~~~~~l~~~~~---~~i~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~-------- 223 (345)
.+.+.++++..+++.+++ ++++++|||+||.+++.+|...|+ .+.+.+..+++...........
T Consensus 140 ~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl~~~~~~~~~~~~~~~~ 219 (377)
T 4ezi_A 140 SSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGWEETMHFVMLEPGPRAT 219 (377)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCHHHHHHHHHHSCCTTHH
T ss_pred HHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCHHHHHHHHhcCCCcccc
Confidence 122233444455555554 589999999999999999987654 4777777777655332111110
Q ss_pred -------HHhHhccCC--------ChhhHHHHHHHcccCCc----------hhhhhH-HHHHH--------HHHHHHHhh
Q psy4974 224 -------EGMRRLSNW--------SPMARSEVLKAYDNDVN----------YITGIF-NQYVD--------MVNLIFKSY 269 (345)
Q Consensus 224 -------~~~~~~~~~--------~~~~~~~~~~~~~~~~~----------~~~~~~-~~~~~--------~~~~~~~~~ 269 (345)
..+..+... .+.....+......... .....+ ..+.. .+...+...
T Consensus 220 ~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 299 (377)
T 4ezi_A 220 AYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIFQPKFSNGIISKTDRNTEILKINF 299 (377)
T ss_dssp HHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGGBCHHHHHHHHTTCSTTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHHhchhhhhhcccccchHHHHHHHHh
Confidence 000001110 01111111111110000 000010 00000 111111111
Q ss_pred CchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC--C-cEEEEeCC--CCCcccccChHHHHHHHHHHHHhh
Q psy4974 270 GRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK--F-CQYYQFSS--GGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 270 ~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~--~-~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
.. .-..+++|+++++|++|.++|.+.++.+.+.+. + ++++.+++ .+|... .......+.+||++.
T Consensus 300 ~~-----~~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~v~~~~~~~~~~~H~~~---~~~~~~~~~~wl~~~ 369 (377)
T 4ezi_A 300 NH-----YDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSDFVWIKSVSDALDHVQA---HPFVLKEQVDFFKQF 369 (377)
T ss_dssp CC-----CCSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCSCEEEEESCSSCCTTTT---HHHHHHHHHHHHHHH
T ss_pred cc-----cCCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEEcCCCCCCccCh---HHHHHHHHHHHHHHh
Confidence 10 122578999999999999999998888877652 2 78999998 788754 334556667777654
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3.9e-16 Score=134.12 Aligned_cols=177 Identities=11% Similarity=0.102 Sum_probs=115.2
Q ss_pred CceEEEEcCcCCCchhhHH-------HHHHhhCCC----CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccch
Q psy4974 93 AQVLFFTYGVLGEIRNSFK-------KQLTAFDPK----LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYI 161 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~-------~~~~~L~~~----G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~ 161 (345)
.|+||++||++++. ..|. .+++.|.++ ||.|+++|.++ ++.+.. . ....+
T Consensus 62 ~P~vv~lHG~g~~~-~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~-------------~~~~~~--~---~~~~~ 122 (268)
T 1jjf_A 62 YSVLYLLHGIGGSE-NDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNA-------------AGPGIA--D---GYENF 122 (268)
T ss_dssp BCEEEEECCTTCCT-TTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCC-------------CCTTCS--C---HHHHH
T ss_pred ccEEEEECCCCCCc-chhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCC-------------CCcccc--c---cHHHH
Confidence 37999999998873 4443 346666654 59999999999 765311 1 11111
Q ss_pred -HHHHHHHHHHHHH-hCC----ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChh
Q psy4974 162 -EEDVDIAYELLKL-LGV----CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPM 235 (345)
Q Consensus 162 -~~~~~~~~~~l~~-~~~----~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (345)
++.++++..+++. ++. ++++|+|||+||.+|+.++.++|+++++++++++........
T Consensus 123 ~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~---------------- 186 (268)
T 1jjf_A 123 TKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNE---------------- 186 (268)
T ss_dssp HHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHH----------------
T ss_pred HHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCchh----------------
Confidence 2235555555553 343 589999999999999999999999999999999865432100
Q ss_pred hHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCC-EEEEEeCCCCCCChHHHHHHHhhc----CC
Q psy4974 236 ARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVP-VLVFHSADDVMVSTQQVQSLLNQL----KF 310 (345)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vl~i~G~~D~~v~~~~~~~~~~~~----~~ 310 (345)
..+... . . . .....| +++++|++|.++|. .+.+.+.+ .+
T Consensus 187 ------~~~~~~---~----~----------------~-----~~~~~pp~li~~G~~D~~v~~--~~~~~~~l~~~g~~ 230 (268)
T 1jjf_A 187 ------RLFPDG---G----K----------------A-----AREKLKLLFIACGTNDSLIGF--GQRVHEYCVANNIN 230 (268)
T ss_dssp ------HHCTTT---T----H----------------H-----HHHHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCC
T ss_pred ------hhcCcc---h----h----------------h-----hhhcCceEEEEecCCCCCccH--HHHHHHHHHHCCCc
Confidence 011110 0 0 0 001244 99999999998874 33343333 36
Q ss_pred cEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 311 CQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 311 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+++.++++++|..... ......+.+||.+.
T Consensus 231 ~~~~~~~g~~H~~~~~--~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 231 HVYWLIQGGGHDFNVW--KPGLWNFLQMADEA 260 (268)
T ss_dssp CEEEEETTCCSSHHHH--HHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCcCHhHH--HHHHHHHHHHHHhc
Confidence 7999999999986432 23346677788664
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.65 E-value=3.1e-17 Score=150.27 Aligned_cols=107 Identities=15% Similarity=0.049 Sum_probs=85.2
Q ss_pred CCCceEEEEcCcCCCchhhHHH-HHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFKK-QLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~~-~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
...|+||++||++++....|.. +++.|.+ .||+|+++|+|| +|.|..+. ...+++..++++
T Consensus 68 ~~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g-------------~g~s~~~~----~~~~~~~~~~dl 130 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKG-------------GSKAQYSQ----ASQNIRVVGAEV 130 (432)
T ss_dssp TTSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHH-------------HHTSCHHH----HHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECcc-------------ccCccchh----hHhhHHHHHHHH
Confidence 4457999999999984257877 7788875 579999999999 99885221 122445556677
Q ss_pred HHHHHHh----C--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 169 YELLKLL----G--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 169 ~~~l~~~----~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.++++.+ + .++++|+||||||.+|+.+|.++|++++++++++|...
T Consensus 131 ~~~i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p 182 (432)
T 1gpl_A 131 AYLVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEP 182 (432)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCT
T ss_pred HHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccc
Confidence 7776665 4 57999999999999999999999999999999998755
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.64 E-value=8.4e-16 Score=135.03 Aligned_cols=107 Identities=17% Similarity=0.142 Sum_probs=92.9
Q ss_pred CCCceEEEEcCcCCCch-----hhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIR-----NSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDV 165 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~-----~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~ 165 (345)
+.+++|||+||++++.. ..|..+.+.|.++||.|+++|+|| +|.+..+. . ..++++
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g-------------~g~s~~~~--~----~~~~l~ 66 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSG-------------FQSDDGPN--G----RGEQLL 66 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCS-------------SCCSSSTT--S----HHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCC-------------CCCCCCCC--C----CHHHHH
Confidence 45579999999998832 678899999999999999999999 99885432 2 567889
Q ss_pred HHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCC
Q psy4974 166 DIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLT 216 (345)
Q Consensus 166 ~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 216 (345)
+++.++++.++.++++|+||||||.++..++.++|++|+++|+++++....
T Consensus 67 ~~i~~~l~~~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~~G~ 117 (320)
T 1ys1_X 67 AYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHRGS 117 (320)
T ss_dssp HHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCC
T ss_pred HHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCCCCc
Confidence 999999999998999999999999999999999999999999999865443
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.63 E-value=2.9e-14 Score=123.29 Aligned_cols=119 Identities=10% Similarity=0.031 Sum_probs=83.2
Q ss_pred cCceEEEEEcCCCCceEEEEcCcC--CCchhhHHH---HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCC-CCCCCCC
Q psy4974 80 KGCDIRFIKYGSGAQVLFFTYGVL--GEIRNSFKK---QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYG-QSLPKGR 153 (345)
Q Consensus 80 ~g~~l~~~~~g~~~p~vv~lHG~~--~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G-~s~~~~~ 153 (345)
.|..+.+.....++|+||++||++ ++ ...|.. +.+.+.+.|+.|+++|.++ .+ .++....
T Consensus 21 ~~~~~~~~~~P~~~p~vvllHG~~~~~~-~~~w~~~~~~~~~~~~~~~~vv~pd~~~-------------~~~~~~~~~~ 86 (280)
T 1r88_A 21 MGRDIPVAFLAGGPHAVYLLDAFNAGPD-VSNWVTAGNAMNTLAGKGISVVAPAGGA-------------YSMYTNWEQD 86 (280)
T ss_dssp TTEEEEEEEECCSSSEEEEECCSSCCSS-SCHHHHTSCHHHHHTTSSSEEEEECCCT-------------TSTTSBCSSC
T ss_pred cCCcceEEEeCCCCCEEEEECCCCCCCC-hhhhhhcccHHHHHhcCCeEEEEECCCC-------------CCccCCCCCC
Confidence 344444432222347999999995 34 367765 4567788899999999876 32 1111110
Q ss_pred CCCCccch-HHHHHHHHHHHHH-hCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 154 SFVPFQYI-EEDVDIAYELLKL-LGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 154 ~~~~~~~~-~~~~~~~~~~l~~-~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
. . ..+ ...++++..+++. ++++ +++|+||||||.+|+.+|.++|+++++++++++....
T Consensus 87 ~--~-~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 149 (280)
T 1r88_A 87 G--S-KQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYP 149 (280)
T ss_dssp T--T-CBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCT
T ss_pred C--C-CcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCc
Confidence 0 0 123 3346678888877 6765 8999999999999999999999999999999987654
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.63 E-value=2.7e-15 Score=114.39 Aligned_cols=100 Identities=15% Similarity=0.211 Sum_probs=84.8
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
..+++.+|.+++|...+++ |+||++| ++ ...|..+ |++. |+|+++|+|| ||.|..+..
T Consensus 4 ~~~~~~~g~~~~~~~~g~~-~~vv~~H---~~-~~~~~~~---l~~~-~~v~~~d~~G-------------~G~s~~~~~ 61 (131)
T 2dst_A 4 AGYLHLYGLNLVFDRVGKG-PPVLLVA---EE-ASRWPEA---LPEG-YAFYLLDLPG-------------YGRTEGPRM 61 (131)
T ss_dssp EEEEEETTEEEEEEEECCS-SEEEEES---SS-GGGCCSC---CCTT-SEEEEECCTT-------------STTCCCCCC
T ss_pred eEEEEECCEEEEEEEcCCC-CeEEEEc---CC-HHHHHHH---HhCC-cEEEEECCCC-------------CCCCCCCCC
Confidence 5677889999999998875 5899999 44 3667665 7666 9999999999 999965532
Q ss_pred CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCc
Q psy4974 154 SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH 201 (345)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~ 201 (345)
. +++.++++.++++.++.++++++|||+||.+|+.+|.++|.
T Consensus 62 ---~---~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 62 ---A---PEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp ---C---HHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred ---C---HHHHHHHHHHHHHHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 1 78889999999999999999999999999999999999884
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=3.9e-14 Score=122.48 Aligned_cols=121 Identities=14% Similarity=0.089 Sum_probs=83.2
Q ss_pred CceEEEEEcCCCCceEEEEcCcCC--CchhhHHHH---HHhhCCCCeEEEEeCCCCchhhhccCCccCCCC-CCC--CCC
Q psy4974 81 GCDIRFIKYGSGAQVLFFTYGVLG--EIRNSFKKQ---LTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYG-QSL--PKG 152 (345)
Q Consensus 81 g~~l~~~~~g~~~p~vv~lHG~~~--~~~~~~~~~---~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G-~s~--~~~ 152 (345)
+..+.+.......++||++||+++ + ...|... .+.+.+.|+.|+++|.++ .. .+. .+.
T Consensus 17 ~~~~~v~~~p~~~~~v~llHG~~~~~~-~~~w~~~~~~~~~l~~~~~~vv~pd~~~-------------~~~~~~~~~~~ 82 (280)
T 1dqz_A 17 GRDIKVQFQGGGPHAVYLLDGLRAQDD-YNGWDINTPAFEEYYQSGLSVIMPVGGQ-------------SSFYTDWYQPS 82 (280)
T ss_dssp TEEEEEEEECCSSSEEEECCCTTCCSS-SCHHHHHSCHHHHHTTSSSEEEEECCCT-------------TCTTSBCSSSC
T ss_pred CceeEEEEcCCCCCEEEEECCCCCCCC-cccccccCcHHHHHhcCCeEEEEECCCC-------------CccccCCCCCC
Confidence 344544443322358999999963 5 3777764 356777789999999876 21 111 111
Q ss_pred CCC--CCccchHHH-HHHHHHHHHH-hCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 153 RSF--VPFQYIEED-VDIAYELLKL-LGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 153 ~~~--~~~~~~~~~-~~~~~~~l~~-~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
... .....+++. ++++..++++ ++++ +++|+||||||.+|+.+|.++|+++++++++++....
T Consensus 83 ~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 151 (280)
T 1dqz_A 83 QSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNP 151 (280)
T ss_dssp TTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCT
T ss_pred ccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccc
Confidence 000 001134443 5788888887 7764 8999999999999999999999999999999987654
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.59 E-value=2e-15 Score=130.85 Aligned_cols=103 Identities=17% Similarity=0.092 Sum_probs=89.6
Q ss_pred CCCceEEEEcCcCCCc----hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEI----RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVD 166 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~----~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~ 166 (345)
+.+|+|||+||++++. ...|..+.+.|.++||+|+++|+|| +|.+. . ..+++++
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g-------------~g~s~-----~----~~~~~~~ 62 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQ-------------LDTSE-----V----RGEQLLQ 62 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCS-------------SSCHH-----H----HHHHHHH
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCC-------------CCCch-----h----hHHHHHH
Confidence 4457999999998873 1488899999999999999999999 98762 1 5677889
Q ss_pred HHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 167 IAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 167 ~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
++.++++.++.++++|+|||+||.++..++..+|++|+++|+++++...
T Consensus 63 ~i~~~~~~~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~~g 111 (285)
T 1ex9_A 63 QVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKG 111 (285)
T ss_dssp HHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTTC
T ss_pred HHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCCCC
Confidence 9999999998899999999999999999999999999999999985443
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-15 Score=140.15 Aligned_cols=107 Identities=12% Similarity=0.002 Sum_probs=85.9
Q ss_pred CCCceEEEEcCcCCCchhhHHH-HHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFKK-QLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~~-~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
...|+||++||++++....|.. +++.|.+ .||+|+++|+|| +|.|..+. ...++...++++
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G-------------~G~S~~~~----~~~~~~~~~~dl 130 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRR-------------GSRTEYTQ----ASYNTRVVGAEI 130 (452)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHH-------------HHSSCHHH----HHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechh-------------cccCchhH----hHhhHHHHHHHH
Confidence 4457999999999884267887 6677765 389999999999 99885321 122455667788
Q ss_pred HHHHHHh----CC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 169 YELLKLL----GV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 169 ~~~l~~~----~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.++++.+ ++ ++++|+||||||.+|+.+|.++|++|.++++++|+..
T Consensus 131 ~~li~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1bu8_A 131 AFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (452)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HHHHHHHHHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCcc
Confidence 8887777 54 7999999999999999999999999999999998653
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.59 E-value=6.8e-14 Score=122.46 Aligned_cols=110 Identities=8% Similarity=-0.052 Sum_probs=78.1
Q ss_pred CCceEEEEcCc--CCCchhhHHHH---HHhhCCCCeEEEEeCCCCchhhhccCCccCCCC-CCCCCCC--CCC--Cccch
Q psy4974 92 GAQVLFFTYGV--LGEIRNSFKKQ---LTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYG-QSLPKGR--SFV--PFQYI 161 (345)
Q Consensus 92 ~~p~vv~lHG~--~~~~~~~~~~~---~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G-~s~~~~~--~~~--~~~~~ 161 (345)
..|+||++||+ +++. ..|... .+.+.+.|+.|+++|.++ .. .++.... ... ....+
T Consensus 33 ~~p~vvllHG~~~~~~~-~~w~~~~~~~~~~~~~~~~vv~p~~~~-------------~~~~~~~~~~~~~~g~~~~~~~ 98 (304)
T 1sfr_A 33 NSPALYLLDGLRAQDDF-SGWDINTPAFEWYDQSGLSVVMPVGGQ-------------SSFYSDWYQPACGKAGCQTYKW 98 (304)
T ss_dssp TBCEEEEECCTTCCSSS-CHHHHHCCHHHHHTTSSCEEEEECCCT-------------TCTTCBCSSCEEETTEEECCBH
T ss_pred CCCEEEEeCCCCCCCCc-chhhcCCCHHHHHhcCCeEEEEECCCC-------------CccccccCCccccccccccccH
Confidence 45799999999 5563 677664 466777789999999876 31 1111000 000 01134
Q ss_pred HHH-HHHHHHHHHH-hCCc--cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 162 EED-VDIAYELLKL-LGVC--KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 162 ~~~-~~~~~~~l~~-~~~~--~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
++. ++++..++++ ++++ +++|+||||||.+|+.++.++|+++++++++++....
T Consensus 99 ~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 156 (304)
T 1sfr_A 99 ETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDP 156 (304)
T ss_dssp HHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCT
T ss_pred HHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCc
Confidence 444 4677777776 5655 8999999999999999999999999999999987654
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.59 E-value=1e-15 Score=140.61 Aligned_cols=107 Identities=14% Similarity=0.002 Sum_probs=85.8
Q ss_pred CCCceEEEEcCcCCCchhhHHH-HHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFKK-QLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~~-~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
...|+||++||++++....|.. +++.|.+. ||+|+++|++| +|.|..+. ...++...++++
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g-------------~G~S~~~~----~~~~~~~~~~dl 130 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSS-------------GAKAEYTQ----AVQNIRIVGAET 130 (452)
T ss_dssp TTSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHH-------------HHTSCHHH----HHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEeccc-------------ccccccHH----HHHhHHHHHHHH
Confidence 3457999999999884257877 77777654 89999999999 99885321 122455667777
Q ss_pred HHHHHHh----C--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 169 YELLKLL----G--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 169 ~~~l~~~----~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.++++.+ + .++++|+||||||.+|..+|.++|++|+++++++|+..
T Consensus 131 ~~~i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1w52_X 131 AYLIQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEP 182 (452)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEecccccc
Confidence 7777776 5 67999999999999999999999999999999998643
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=8.6e-14 Score=122.51 Aligned_cols=95 Identities=11% Similarity=0.177 Sum_probs=77.3
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
..++++|+||++++. ..|..+...|. +.|+++|+|+ .. ...+++++++++.+.
T Consensus 45 ~~~~l~~~hg~~g~~-~~~~~~~~~l~---~~v~~~~~~~-------------~~----------~~~~~~~~a~~~~~~ 97 (316)
T 2px6_A 45 SERPLFLVHPIEGST-TVFHSLASRLS---IPTYGLQCTR-------------AA----------PLDSIHSLAAYYIDC 97 (316)
T ss_dssp SSCCEEEECCTTCCS-GGGHHHHHHCS---SCEEEECCCT-------------TS----------CTTCHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCH-HHHHHHHHhcC---CCEEEEECCC-------------CC----------CcCCHHHHHHHHHHH
Confidence 346899999999995 99999999885 8999999987 31 112678889999888
Q ss_pred HHHhCC-ccEEEEEeChhHHHHHHHHHhCC---cc---cceeeEeccCC
Q psy4974 172 LKLLGV-CKVSLFGWCDGGHLSFVFSMKYP---HM---VHKLVIWGTKS 213 (345)
Q Consensus 172 l~~~~~-~~i~lvGhS~Gg~ia~~~a~~~p---~~---v~~lvl~~~~~ 213 (345)
++.+.. .+++++||||||.+|+.+|.+.+ +. +.+++++++.+
T Consensus 98 i~~~~~~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 98 IRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp HTTTCSSCCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred HHHhCCCCCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 887763 68999999999999999998764 45 89999988754
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.3e-15 Score=132.80 Aligned_cols=110 Identities=8% Similarity=-0.008 Sum_probs=88.7
Q ss_pred CceEEEEcCcCCCc---------hhhH----HHHHHhhCCCCeE---EEEeCCCCchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 93 AQVLFFTYGVLGEI---------RNSF----KKQLTAFDPKLFT---SIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 93 ~p~vv~lHG~~~~~---------~~~~----~~~~~~L~~~G~~---vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
+++|||+||++++. ...| ..+++.|.++||. |+++|+|| +|.|..+.....
T Consensus 40 ~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g-------------~G~S~~~~~~~~ 106 (342)
T 2x5x_A 40 KTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLS-------------SSEQGSAQYNYH 106 (342)
T ss_dssp SCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSC-------------HHHHTCGGGCCB
T ss_pred CCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCC-------------CCccCCccccCC
Confidence 46899999999942 3678 8899999988998 99999999 988754321110
Q ss_pred CccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCCC
Q psy4974 157 PFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSFL 215 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~ 215 (345)
.....++.++++.++++..+.++++|+||||||.+++.++.++ |++|+++|+++++...
T Consensus 107 ~~~~~~~l~~~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~G 167 (342)
T 2x5x_A 107 SSTKYAIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIRG 167 (342)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCccc
Confidence 1224566677788888888889999999999999999999998 8999999999987543
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.56 E-value=3.9e-15 Score=136.15 Aligned_cols=107 Identities=12% Similarity=0.073 Sum_probs=82.7
Q ss_pred CCCCceEEEEcCcCCCchhhHHH-HHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 90 GSGAQVLFFTYGVLGEIRNSFKK-QLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 90 g~~~p~vv~lHG~~~~~~~~~~~-~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
..+.|+||++||++++....|.. +++.|.+ .+|+|+++|+|| +|.+..+. ...++...+++
T Consensus 67 ~~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g-------------~g~s~y~~----~~~~~~~~a~~ 129 (450)
T 1rp1_A 67 QTDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKK-------------GSQTSYTQ----AANNVRVVGAQ 129 (450)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHH-------------HHSSCHHH----HHHHHHHHHHH
T ss_pred CCCCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCcc-------------ccCCcchH----HHHHHHHHHHH
Confidence 34558999999999885347876 5666554 479999999999 98774221 11245556777
Q ss_pred HHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 168 AYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 168 ~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
+.++++.+ +.++++|+||||||.+|..+|.++|+ |.++++++|+..
T Consensus 130 l~~ll~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p 181 (450)
T 1rp1_A 130 VAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEA 181 (450)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCT
T ss_pred HHHHHHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcccc
Confidence 77777765 46799999999999999999999999 999999998654
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.56 E-value=3.1e-15 Score=136.79 Aligned_cols=108 Identities=13% Similarity=0.059 Sum_probs=82.6
Q ss_pred CCCCceEEEEcCcCCCchhhHHH-HHHhh-CCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 90 GSGAQVLFFTYGVLGEIRNSFKK-QLTAF-DPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 90 g~~~p~vv~lHG~~~~~~~~~~~-~~~~L-~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
..+.|++|++||++++....|.. +++.| ...+|+|+++|+|| +|.|..+. ...++...+++
T Consensus 66 ~~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g-------------~g~s~y~~----~~~~~~~v~~~ 128 (449)
T 1hpl_A 66 NTGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKS-------------GSRTAYSQ----ASQNVRIVGAE 128 (449)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHH-------------HHSSCHHH----HHHHHHHHHHH
T ss_pred CCCCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCc-------------ccCCccHH----HHHHHHHHHHH
Confidence 34558999999999884357876 66666 33469999999999 99874221 11234455666
Q ss_pred HHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 168 AYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 168 ~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
+.++++.+ +.++++|+||||||.+|..+|.++|++|.++++++|+..
T Consensus 129 la~ll~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p 181 (449)
T 1hpl_A 129 VAYLVGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEP 181 (449)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HHHHHHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcccc
Confidence 66666655 467999999999999999999999999999999998654
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.52 E-value=2.1e-13 Score=130.50 Aligned_cols=121 Identities=12% Similarity=-0.058 Sum_probs=82.3
Q ss_pred cCceEEEEEcC---C-CCceEEEEcCcCCCc------hhhHHH-HH---HhhCCCCeEEEEeCCCCchhhhccCCccCCC
Q psy4974 80 KGCDIRFIKYG---S-GAQVLFFTYGVLGEI------RNSFKK-QL---TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGY 145 (345)
Q Consensus 80 ~g~~l~~~~~g---~-~~p~vv~lHG~~~~~------~~~~~~-~~---~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~ 145 (345)
+|..|++..+. . ..|+||++||++... ...|.. +. +.|+++||.|+++|+|| +
T Consensus 34 DG~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG-------------~ 100 (615)
T 1mpx_A 34 DGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRG-------------K 100 (615)
T ss_dssp TSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTT-------------S
T ss_pred CCCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCC-------------C
Confidence 88888876542 1 236788889887641 013432 22 67888999999999999 9
Q ss_pred CCCCCCCCCCCCc-----c----chHHHHHHHHHHHHHh-CC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCC
Q psy4974 146 GQSLPKGRSFVPF-----Q----YIEEDVDIAYELLKLL-GV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 146 G~s~~~~~~~~~~-----~----~~~~~~~~~~~~l~~~-~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 213 (345)
|.|......+ .. . ...+++.++.+++... .. .++.++|||+||.+++.+|...|++++++|.+++..
T Consensus 101 g~S~g~~~~~-~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~ 179 (615)
T 1mpx_A 101 YGSEGDYVMT-RPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMI 179 (615)
T ss_dssp TTCCSCCCTT-CCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCC
T ss_pred CCCCCccccc-cccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCcc
Confidence 9886543222 10 1 2222233333333333 22 389999999999999999988889999999999876
Q ss_pred C
Q psy4974 214 F 214 (345)
Q Consensus 214 ~ 214 (345)
.
T Consensus 180 d 180 (615)
T 1mpx_A 180 D 180 (615)
T ss_dssp C
T ss_pred c
Confidence 6
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=5.3e-13 Score=125.54 Aligned_cols=117 Identities=9% Similarity=0.089 Sum_probs=84.1
Q ss_pred cCceEEEEEc---CCCC-ceEEEEcCcCCCchhhHH----------------------HHHHhhCCCCeEEEEeCCCCch
Q psy4974 80 KGCDIRFIKY---GSGA-QVLFFTYGVLGEIRNSFK----------------------KQLTAFDPKLFTSIFWDPPGNV 133 (345)
Q Consensus 80 ~g~~l~~~~~---g~~~-p~vv~lHG~~~~~~~~~~----------------------~~~~~L~~~G~~vi~~D~~G~~ 133 (345)
+|..|+...+ +.++ |+||+.||++......+. .....|+++||.|+++|+||
T Consensus 50 DG~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv~~D~RG-- 127 (560)
T 3iii_A 50 DGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVKVALRG-- 127 (560)
T ss_dssp TSCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEEEEECTT--
T ss_pred CCcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEEEEcCCC--
Confidence 8888886654 2233 789999999876211110 12567899999999999999
Q ss_pred hhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh---CC--ccEEEEEeChhHHHHHHHHHhCCcccceeeE
Q psy4974 134 VLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLL---GV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVI 208 (345)
Q Consensus 134 ~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 208 (345)
+|.|......+ . ....+|+.+.++.+ .. .+|.++|||+||.+++.+|...|+.++++|.
T Consensus 128 -----------~G~S~G~~~~~-~----~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~ 191 (560)
T 3iii_A 128 -----------SDKSKGVLSPW-S----KREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIP 191 (560)
T ss_dssp -----------STTCCSCBCTT-S----HHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEE
T ss_pred -----------CCCCCCccccC-C----hhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEe
Confidence 99997543322 1 23344554444443 21 4899999999999999999999999999999
Q ss_pred eccCCC
Q psy4974 209 WGTKSF 214 (345)
Q Consensus 209 ~~~~~~ 214 (345)
.++...
T Consensus 192 ~~~~~d 197 (560)
T 3iii_A 192 WEGLND 197 (560)
T ss_dssp ESCCCB
T ss_pred cCCccc
Confidence 988655
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.6e-12 Score=123.63 Aligned_cols=116 Identities=13% Similarity=-0.019 Sum_probs=82.8
Q ss_pred cCceEEEEEc---CCC-CceEEEEcCcCCCchhhHHH---HH-HhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 80 KGCDIRFIKY---GSG-AQVLFFTYGVLGEIRNSFKK---QL-TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 80 ~g~~l~~~~~---g~~-~p~vv~lHG~~~~~~~~~~~---~~-~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
||..|++..+ +.+ .|+||++||++... ..+.. .+ ..|+++||.|+++|+|| +|.|...
T Consensus 18 DG~~L~~~~~~P~~~~~~P~vv~~~~~g~~~-~~~~~y~~~~~~~la~~Gy~vv~~D~RG-------------~G~S~g~ 83 (587)
T 3i2k_A 18 DGVRLAVDLYRPDADGPVPVLLVRNPYDKFD-VFAWSTQSTNWLEFVRDGYAVVIQDTRG-------------LFASEGE 83 (587)
T ss_dssp TSCEEEEEEEEECCSSCEEEEEEEESSCTTC-HHHHHTTTCCTHHHHHTTCEEEEEECTT-------------STTCCSC
T ss_pred CCCEEEEEEEECCCCCCeeEEEEECCcCCCc-cccccchhhHHHHHHHCCCEEEEEcCCC-------------CCCCCCc
Confidence 8888887554 222 37888889887773 43322 23 77888999999999999 9999755
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhC--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccC
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLG--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTK 212 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 212 (345)
...+ . ...+++.++.+++.... ..++.++|||+||.+++.+|...|+.++++|.+++.
T Consensus 84 ~~~~-~--~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~ 143 (587)
T 3i2k_A 84 FVPH-V--DDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMAS 143 (587)
T ss_dssp CCTT-T--THHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCC
T ss_pred cccc-c--chhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCc
Confidence 4332 1 22222333333333322 248999999999999999999999999999999887
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.48 E-value=3.9e-15 Score=135.04 Aligned_cols=119 Identities=8% Similarity=0.056 Sum_probs=80.5
Q ss_pred cCceEEEEEc---C-C-CCceEEEEcCcCCCchhhH--------------H----HHHHhhCCCCeEEEEeCCCCchhhh
Q psy4974 80 KGCDIRFIKY---G-S-GAQVLFFTYGVLGEIRNSF--------------K----KQLTAFDPKLFTSIFWDPPGNVVLY 136 (345)
Q Consensus 80 ~g~~l~~~~~---g-~-~~p~vv~lHG~~~~~~~~~--------------~----~~~~~L~~~G~~vi~~D~~G~~~~~ 136 (345)
+|..+..... + . ..|+||++||++++. ..+ . .++..|+++||.|+++|+||
T Consensus 96 ~g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~-~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~rg----- 169 (391)
T 3g8y_A 96 PKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTK-EGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAA----- 169 (391)
T ss_dssp TTCCEEEEEEEETTCCSCEEEEEEECCTTCCH-HHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCTT-----
T ss_pred CCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCc-hhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCCC-----
Confidence 5666665432 2 2 237999999998873 422 2 57788999999999999999
Q ss_pred ccCCccCCCCCCCCCCCC-----CCCccchH------------HHHHHHHHHHHHhC------CccEEEEEeChhHHHHH
Q psy4974 137 LLGKTCSGYGQSLPKGRS-----FVPFQYIE------------EDVDIAYELLKLLG------VCKVSLFGWCDGGHLSF 193 (345)
Q Consensus 137 ~~g~~~~~~G~s~~~~~~-----~~~~~~~~------------~~~~~~~~~l~~~~------~~~i~lvGhS~Gg~ia~ 193 (345)
+|.+...... + ....+. ..+.|+.+.++.+. .++|.++||||||.+|+
T Consensus 170 --------~G~s~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al 240 (391)
T 3g8y_A 170 --------AGEASDLECYDKGWNY-DYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMM 240 (391)
T ss_dssp --------SGGGCSSGGGTTTTSC-CHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHH
T ss_pred --------ccccCCcccccccccc-hHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHH
Confidence 9988644211 1 111111 11244555555442 24799999999999999
Q ss_pred HHHHhCCcccceeeEeccCCC
Q psy4974 194 VFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 194 ~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.+|... ++|+++|+.++...
T Consensus 241 ~~a~~~-~~i~a~v~~~~~~~ 260 (391)
T 3g8y_A 241 VLGVLD-KDIYAFVYNDFLCQ 260 (391)
T ss_dssp HHHHHC-TTCCEEEEESCBCC
T ss_pred HHHHcC-CceeEEEEccCCCC
Confidence 988765 57999998887544
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.1e-13 Score=123.95 Aligned_cols=118 Identities=14% Similarity=0.211 Sum_probs=80.0
Q ss_pred cCceEEEEEc---C-C-CCceEEEEcCcCCCchhhHH------------------HHHHhhCCCCeEEEEeCCCCchhhh
Q psy4974 80 KGCDIRFIKY---G-S-GAQVLFFTYGVLGEIRNSFK------------------KQLTAFDPKLFTSIFWDPPGNVVLY 136 (345)
Q Consensus 80 ~g~~l~~~~~---g-~-~~p~vv~lHG~~~~~~~~~~------------------~~~~~L~~~G~~vi~~D~~G~~~~~ 136 (345)
+|..+..... + . ..|+||++||++++. ..+. .++..|+++||.|+++|+||
T Consensus 101 ~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~-~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~rG----- 174 (398)
T 3nuz_A 101 PKCVSTFLVLIPDNINKPVPAILCIPGSGGNK-EGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPA----- 174 (398)
T ss_dssp TTBCEEEEEEEESSCCSCEEEEEEECCTTCCH-HHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCTT-----
T ss_pred CCcEEEEEEEeCCCCCCCccEEEEEcCCCCCc-ccccccccccccccccccchHHHHHHHHHHCCCEEEEecCCC-----
Confidence 5666664432 2 2 237999999998873 5332 57888999999999999999
Q ss_pred ccCCccCCCCCCCCCCC-----CCCC------------ccchHHHHHHHHHHHHHhC------CccEEEEEeChhHHHHH
Q psy4974 137 LLGKTCSGYGQSLPKGR-----SFVP------------FQYIEEDVDIAYELLKLLG------VCKVSLFGWCDGGHLSF 193 (345)
Q Consensus 137 ~~g~~~~~~G~s~~~~~-----~~~~------------~~~~~~~~~~~~~~l~~~~------~~~i~lvGhS~Gg~ia~ 193 (345)
+|.+..... .+ . .......+.|+.+.++.+. .++|.++|||+||.+|+
T Consensus 175 --------~G~s~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~ 245 (398)
T 3nuz_A 175 --------AGEASDLERYTLGSNY-DYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMM 245 (398)
T ss_dssp --------SGGGCSSGGGTTTTSC-CHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHH
T ss_pred --------CCcccccccccccccc-chhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHH
Confidence 988854320 01 0 0111123345555555553 24799999999999999
Q ss_pred HHHHhCCcccceeeEeccCC
Q psy4974 194 VFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 194 ~~a~~~p~~v~~lvl~~~~~ 213 (345)
.++...+ +++++|.+++..
T Consensus 246 ~~aa~~~-~i~a~v~~~~~~ 264 (398)
T 3nuz_A 246 VLGTLDT-SIYAFVYNDFLC 264 (398)
T ss_dssp HHHHHCT-TCCEEEEESCBC
T ss_pred HHHhcCC-cEEEEEEecccc
Confidence 8888764 789888876543
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=3e-13 Score=123.27 Aligned_cols=109 Identities=29% Similarity=0.348 Sum_probs=81.1
Q ss_pred CCCceEEEEcCcCCCchhhHH--HHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCC-------CCCCCccc
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFK--KQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG-------RSFVPFQY 160 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~--~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~-------~~~~~~~~ 160 (345)
++. |||++||+.++....|. .....|++. |+.|+++|+|| ||.|.+.. ... ..-+
T Consensus 37 ~g~-Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg-------------~G~S~p~~~~~~~~~~~l-~~lt 101 (446)
T 3n2z_B 37 NGG-SILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRY-------------YGESLPFGDNSFKDSRHL-NFLT 101 (446)
T ss_dssp TTC-EEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTT-------------STTCCTTGGGGGSCTTTS-TTCS
T ss_pred CCC-CEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCC-------------CCCCCCCCccccccchhh-ccCC
Confidence 344 78999999888422221 233334433 68999999999 99996432 122 2235
Q ss_pred hHHHHHHHHHHHHHhCC-------ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 161 IEEDVDIAYELLKLLGV-------CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 161 ~~~~~~~~~~~l~~~~~-------~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.++.++|+..+++.+.. .+++++||||||.+|+.++.++|+.|.++|+.+++..
T Consensus 102 ~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv~ 162 (446)
T 3n2z_B 102 SEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIW 162 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccchh
Confidence 78889999988887754 3899999999999999999999999999999886543
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.43 E-value=3.3e-12 Score=122.86 Aligned_cols=122 Identities=11% Similarity=-0.063 Sum_probs=81.0
Q ss_pred cCceEEEEEc---CCC-CceEEEEcCcCCCc-----h--hhHHHH---H-HhhCCCCeEEEEeCCCCchhhhccCCccCC
Q psy4974 80 KGCDIRFIKY---GSG-AQVLFFTYGVLGEI-----R--NSFKKQ---L-TAFDPKLFTSIFWDPPGNVVLYLLGKTCSG 144 (345)
Q Consensus 80 ~g~~l~~~~~---g~~-~p~vv~lHG~~~~~-----~--~~~~~~---~-~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~ 144 (345)
+|..|+...+ +.+ .|+||++||++... . ..|... . +.|+++||.|+.+|+||
T Consensus 46 DG~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG------------- 112 (652)
T 2b9v_A 46 DGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRG------------- 112 (652)
T ss_dssp TSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTT-------------
T ss_pred CCcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCc-------------
Confidence 8888876543 222 36788889876431 0 112222 2 67888999999999999
Q ss_pred CCCCCCCCCCCCC-----cc----chHHHHHHHHHHHHHh-CC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccC
Q psy4974 145 YGQSLPKGRSFVP-----FQ----YIEEDVDIAYELLKLL-GV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTK 212 (345)
Q Consensus 145 ~G~s~~~~~~~~~-----~~----~~~~~~~~~~~~l~~~-~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 212 (345)
+|.|......+ . .. ...+.+.++.+++... +. .+|.++|||+||.+++.+|...|+.++++|.+++.
T Consensus 113 ~g~S~g~~~~~-~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~ 191 (652)
T 2b9v_A 113 KYGSQGDYVMT-RPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPM 191 (652)
T ss_dssp STTCCSCCCTT-CCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEEC
T ss_pred CCCCCCccccc-ccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEecccc
Confidence 98886543221 1 01 2222333333444433 32 38999999999999999999888999999999887
Q ss_pred CCC
Q psy4974 213 SFL 215 (345)
Q Consensus 213 ~~~ 215 (345)
...
T Consensus 192 ~d~ 194 (652)
T 2b9v_A 192 VDG 194 (652)
T ss_dssp CCT
T ss_pred ccc
Confidence 653
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.1e-11 Score=107.85 Aligned_cols=99 Identities=9% Similarity=0.075 Sum_probs=71.5
Q ss_pred ceEEEEcCcCCCchhhH-------HHHHHhhCCC----CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchH
Q psy4974 94 QVLFFTYGVLGEIRNSF-------KKQLTAFDPK----LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIE 162 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~-------~~~~~~L~~~----G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~ 162 (345)
|+|+++||++++. ..| ..+++.|..+ ++.|+++|.+| - +. .... ...
T Consensus 70 Pvlv~lHG~~~~~-~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~-------------~--~~-~~~~-----~~~ 127 (297)
T 1gkl_A 70 NIFYLMHGGGENE-NTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNG-------------G--NC-TAQN-----FYQ 127 (297)
T ss_dssp EEEEEECCTTCCT-TSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCS-------------T--TC-CTTT-----HHH
T ss_pred CEEEEECCCCCCc-chhhcccchHHHHHHHHHHcCCCCCEEEEEecCcC-------------C--cc-chHH-----HHH
Confidence 7888999998763 433 3556666554 49999999876 2 11 1111 123
Q ss_pred HHHHHHHHHHHHh-CC--------------ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 163 EDVDIAYELLKLL-GV--------------CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 163 ~~~~~~~~~l~~~-~~--------------~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
..++++..+++.. .. .++.|+|+||||.+|+.++.++|+++++++++++...
T Consensus 128 ~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~~ 194 (297)
T 1gkl_A 128 EFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYW 194 (297)
T ss_dssp HHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCC
T ss_pred HHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEeccccc
Confidence 4466777777653 22 3689999999999999999999999999999998754
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-11 Score=113.05 Aligned_cols=61 Identities=15% Similarity=0.146 Sum_probs=46.8
Q ss_pred CCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 279 PYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 279 ~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
..+++|++++||.+|.++|.+.++++.+.+ .+++++++++++|....+. -...+.+||++.
T Consensus 341 ~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~~~~---~~~d~l~WL~~r 405 (462)
T 3guu_A 341 SVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAEIF---GLVPSLWFIKQA 405 (462)
T ss_dssp CCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHHHH---THHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCchhh---hHHHHHHHHHHH
Confidence 356899999999999999999888888766 3578999999999876421 145556666543
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.5e-14 Score=131.15 Aligned_cols=110 Identities=13% Similarity=0.049 Sum_probs=76.3
Q ss_pred CCceEEEEcCcCCCc-------hhhHH----HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC----
Q psy4974 92 GAQVLFFTYGVLGEI-------RNSFK----KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV---- 156 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~-------~~~~~----~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~---- 156 (345)
.+++|||+||++++. ...|. .+++.|.++||+|+++|+|| +|.|........
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G-------------~G~S~~~~~~l~~~i~ 117 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSA-------------LASNHERAVELYYYLK 117 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCS-------------SSCHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCC-------------CCCCccchHHhhhhhh
Confidence 446899999998752 14574 58889988899999999999 987732100000
Q ss_pred ------C-----ccchHHHHHHHHHHHHHhC-CccEEEEEeChhHHHHHHHHHh--------------------------
Q psy4974 157 ------P-----FQYIEEDVDIAYELLKLLG-VCKVSLFGWCDGGHLSFVFSMK-------------------------- 198 (345)
Q Consensus 157 ------~-----~~~~~~~~~~~~~~l~~~~-~~~i~lvGhS~Gg~ia~~~a~~-------------------------- 198 (345)
. ..+++++++++.++++.++ .++++|+||||||.+|+.+|..
T Consensus 118 ~g~g~sg~~~~~~~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~ 197 (431)
T 2hih_A 118 GGRVDYGAAHSEKYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGG 197 (431)
T ss_dssp CEEEECCHHHHHHHTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCC
T ss_pred hccccccccccccCCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccC
Confidence 0 0011111233344455554 3799999999999999998876
Q ss_pred CCcccceeeEeccCCC
Q psy4974 199 YPHMVHKLVIWGTKSF 214 (345)
Q Consensus 199 ~p~~v~~lvl~~~~~~ 214 (345)
+|++|.++|+++++..
T Consensus 198 ~p~~V~slv~i~tP~~ 213 (431)
T 2hih_A 198 QDNMVTSITTIATPHN 213 (431)
T ss_dssp CCSCEEEEEEESCCTT
T ss_pred cccceeEEEEECCCCC
Confidence 6889999999998654
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.9e-12 Score=115.77 Aligned_cols=102 Identities=12% Similarity=0.062 Sum_probs=72.2
Q ss_pred CCceEEEEcCcCCCch------hhHH----HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccch
Q psy4974 92 GAQVLFFTYGVLGEIR------NSFK----KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYI 161 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~------~~~~----~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~ 161 (345)
.+++|||+||++++.. ..|. .+++.|.++||+|+++|+|| +|.+... .
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g-------------~G~s~~~---------a 62 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGP-------------LSSNWDR---------A 62 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCS-------------SBCHHHH---------H
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCC-------------CCCcccc---------H
Confidence 3468999999988742 2375 34588888899999999999 9876211 1
Q ss_pred HHHHHHHH------------------------HHHHH-hCCccEEEEEeChhHHHHHHHHHh------------------
Q psy4974 162 EEDVDIAY------------------------ELLKL-LGVCKVSLFGWCDGGHLSFVFSMK------------------ 198 (345)
Q Consensus 162 ~~~~~~~~------------------------~~l~~-~~~~~i~lvGhS~Gg~ia~~~a~~------------------ 198 (345)
.+..+.+. +++++ .+.++++||||||||.++..++..
T Consensus 63 ~~l~~~i~~~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~ 142 (387)
T 2dsn_A 63 CEAYAQLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVS 142 (387)
T ss_dssp HHHHHHHHCEEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHhhhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccc
Confidence 11111121 11122 467899999999999999999972
Q ss_pred -CC------cccceeeEeccCCCC
Q psy4974 199 -YP------HMVHKLVIWGTKSFL 215 (345)
Q Consensus 199 -~p------~~v~~lvl~~~~~~~ 215 (345)
+| ++|.++|+++++...
T Consensus 143 ~~P~~~g~~~~V~sLV~i~tP~~G 166 (387)
T 2dsn_A 143 LSPLFEGGHHFVLSVTTIATPHDG 166 (387)
T ss_dssp CCGGGTCCCCCEEEEEEESCCTTC
T ss_pred cCccccccccceeEEEEECCCCCC
Confidence 35 689999999986543
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.26 E-value=4.3e-11 Score=103.01 Aligned_cols=114 Identities=11% Similarity=0.109 Sum_probs=76.8
Q ss_pred HHHHHHHHH-hCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHH
Q psy4974 166 DIAYELLKL-LGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLK 242 (345)
Q Consensus 166 ~~~~~~l~~-~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (345)
+++..+++. ++. +++.++|||+||.+|+.++.++|+.++++++++|.......
T Consensus 137 ~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~~~~~~~------------------------ 192 (275)
T 2qm0_A 137 EELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSIWWNNK------------------------ 192 (275)
T ss_dssp HTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCTTHHHH------------------------
T ss_pred HHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCceeeeChH------------------------
Confidence 455555554 333 58999999999999999999999999999999886431000
Q ss_pred HcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc---C----CcEEEE
Q psy4974 243 AYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL---K----FCQYYQ 315 (345)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~---~----~~~~~~ 315 (345)
.+... . +.+.... .......|+++++|+.|..++...++++.+.+ . ++++.+
T Consensus 193 ~~~~~---~----~~~~~~~--------------~~~~~~~~~~l~~G~~D~~~~~~~~~~~~~~L~~~~~~g~~~~~~~ 251 (275)
T 2qm0_A 193 SVLEK---E----ENLIIEL--------------NNAKFETGVFLTVGSLEREHMVVGANELSERLLQVNHDKLKFKFYE 251 (275)
T ss_dssp GGGGG---T----THHHHHH--------------HTCSSCEEEEEEEETTSCHHHHHHHHHHHHHHHHCCCTTEEEEEEE
T ss_pred HHHHH---H----HHHHhhh--------------cccCCCceEEEEeCCcccchhhHHHHHHHHHHHhcccCCceEEEEE
Confidence 00000 0 0000000 02334679999999999877777888887776 3 257889
Q ss_pred eCCCCCccc
Q psy4974 316 FSSGGHSCH 324 (345)
Q Consensus 316 ~~~~gH~~~ 324 (345)
+++++|+..
T Consensus 252 ~~g~~H~~~ 260 (275)
T 2qm0_A 252 AEGENHASV 260 (275)
T ss_dssp ETTCCTTTH
T ss_pred CCCCCcccc
Confidence 999999754
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=3.6e-11 Score=109.09 Aligned_cols=187 Identities=10% Similarity=0.061 Sum_probs=108.9
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCe----EEEEeCCCCchhhhccCCccCCCC-CCCCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLF----TSIFWDPPGNVVLYLLGKTCSGYG-QSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~----~vi~~D~~G~~~~~~~g~~~~~~G-~s~~~~~~~~~~~~~~~~~~~ 167 (345)
.|+|+++||.+......+..+++.|.++|+ .|+++|.+| .+ ++.... . .....+..+++
T Consensus 197 ~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~-------------~~~r~~~~~--~-~~~~~~~l~~e 260 (403)
T 3c8d_A 197 RPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAID-------------TTHRAHELP--C-NADFWLAVQQE 260 (403)
T ss_dssp CCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCS-------------HHHHHHHSS--S-CHHHHHHHHHT
T ss_pred CCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCC-------------CccccccCC--C-hHHHHHHHHHH
Confidence 379999999532100112345566665555 499999987 31 110000 0 11112223456
Q ss_pred HHHHHHHh-C----CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHH
Q psy4974 168 AYELLKLL-G----VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLK 242 (345)
Q Consensus 168 ~~~~l~~~-~----~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (345)
+..+++.. . .++++|+||||||.+|+.++.++|+++++++++++........ . .
T Consensus 261 l~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~~-----------~--~-------- 319 (403)
T 3c8d_A 261 LLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG-----------G--Q-------- 319 (403)
T ss_dssp HHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTT-----------S--S--------
T ss_pred HHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCCC-----------C--C--------
Confidence 66666653 3 2489999999999999999999999999999999875422110 0 0
Q ss_pred HcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEEEeCC
Q psy4974 243 AYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYYQFSS 318 (345)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~~ 318 (345)
... .+ . ..+.. ........|+++++|+.|..+ ....+.+.+.+. ++++.++++
T Consensus 320 --~~~--~~-------~----~~~~~-------~~~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v~~~~~~G 376 (403)
T 3c8d_A 320 --QEG--VL-------L----EKLKA-------GEVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG 376 (403)
T ss_dssp --SCC--HH-------H----HHHHT-------TSSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC
T ss_pred --cHH--HH-------H----HHHHh-------ccccCCCceEEEEeeCCCchh-HHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 000 00 0 00000 012345678999999988643 456667766663 578999997
Q ss_pred CCCcccccChHHHHHHHHHHHHhh
Q psy4974 319 GGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 319 ~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+|.... -.+.+ .....||.+.
T Consensus 377 -gH~~~~-w~~~l-~~~l~~l~~~ 397 (403)
T 3c8d_A 377 -GHDALC-WRGGL-MQGLIDLWQP 397 (403)
T ss_dssp -CSCHHH-HHHHH-HHHHHHHHGG
T ss_pred -CCCHHH-HHHHH-HHHHHHHhcc
Confidence 687431 12333 4455566543
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=99.03 E-value=3.4e-07 Score=83.60 Aligned_cols=127 Identities=12% Similarity=0.121 Sum_probs=81.1
Q ss_pred ceeeeEEEc-CceEEEEEcCC-----CCceEEEEcCcCCCchhhHHHHHH-----------hh-------CCCCeEEEEe
Q psy4974 72 FTEGFFSIK-GCDIRFIKYGS-----GAQVLFFTYGVLGEIRNSFKKQLT-----------AF-------DPKLFTSIFW 127 (345)
Q Consensus 72 ~~~~~~~~~-g~~l~~~~~g~-----~~p~vv~lHG~~~~~~~~~~~~~~-----------~L-------~~~G~~vi~~ 127 (345)
....+++++ +..++|.-... .+|.+|++||++|++ ..+-.+.+ .| .+. .+++.+
T Consensus 21 ~~sGyv~v~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~S-s~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~-~~~lfi 98 (452)
T 1ivy_A 21 QYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCS-SLDGLLTEHGPFLVQPDGVTLEYNPYSWNLI-ANVLYL 98 (452)
T ss_dssp EEEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBC-THHHHHTTTSSEEECTTSSCEEECTTCGGGS-SEEEEE
T ss_pred eeEEEEeeCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHH-HHHHHHHhcCCcEEeCCCceeeeCCCccccc-ccEEEE
Confidence 346778885 57777765432 348999999999986 55533321 01 123 789999
Q ss_pred CC-CCchhhhccCCccCCCCCCCCCCCCCCCcc---chHHHHHHHHHHHHH---hCCccEEEEEeChhHHHHHHHHHh--
Q psy4974 128 DP-PGNVVLYLLGKTCSGYGQSLPKGRSFVPFQ---YIEEDVDIAYELLKL---LGVCKVSLFGWCDGGHLSFVFSMK-- 198 (345)
Q Consensus 128 D~-~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~---~~~~~~~~~~~~l~~---~~~~~i~lvGhS~Gg~ia~~~a~~-- 198 (345)
|. +| .|.|......+ ... ...+..+.+..+++. +...+++|+|+|+||..+..+|..
T Consensus 99 DqP~G-------------tGfS~~~~~~~-~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~ 164 (452)
T 1ivy_A 99 ESPAG-------------VGFSYSDDKFY-ATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVM 164 (452)
T ss_dssp CCSTT-------------STTCEESSCCC-CCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHT
T ss_pred ecCCC-------------CCcCCcCCCCC-cCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHH
Confidence 96 68 88775333333 211 122233444555554 344699999999999966666653
Q ss_pred --CCcccceeeEeccCCC
Q psy4974 199 --YPHMVHKLVIWGTKSF 214 (345)
Q Consensus 199 --~p~~v~~lvl~~~~~~ 214 (345)
.+-.++++++.++...
T Consensus 165 ~~~~~~l~g~~ign~~~d 182 (452)
T 1ivy_A 165 QDPSMNLQGLAVGNGLSS 182 (452)
T ss_dssp TCTTSCEEEEEEESCCSB
T ss_pred hcCccccceEEecCCccC
Confidence 3567899999998765
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.9e-09 Score=94.01 Aligned_cols=123 Identities=14% Similarity=0.155 Sum_probs=75.3
Q ss_pred ccEEEEEeChhHHHHHHHHHhCCcccc-eeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHH
Q psy4974 178 CKVSLFGWCDGGHLSFVFSMKYPHMVH-KLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFN 256 (345)
Q Consensus 178 ~~i~lvGhS~Gg~ia~~~a~~~p~~v~-~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (345)
++|+|.|+|+||++++.++..+|+.++ +++++++.+............+ ... +... ....
T Consensus 11 ~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~~~~~~---~~~-----------~~~~-----~~~~ 71 (318)
T 2d81_A 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCM---YNG-----------YPSI-----TTPT 71 (318)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSCGGGGS---TTC-----------CCCC-----HHHH
T ss_pred ceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHHHHHHh---hcc-----------CCCC-----CCHH
Confidence 589999999999999999999999998 8887776443211110000000 000 0000 0000
Q ss_pred HHHHHHHHHHHhhCchhhhccCCCC-CCCEEEEEeCCCCCCChHHHHHHHhhcC------CcEEEEeCCCCCcccccC
Q psy4974 257 QYVDMVNLIFKSYGRNVYQELLPYV-DVPVLVFHSADDVMVSTQQVQSLLNQLK------FCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvl~i~G~~D~~v~~~~~~~~~~~~~------~~~~~~~~~~gH~~~~~~ 327 (345)
.+...+.. .....+.++ ..|++++||++|.+||++.++++.+.+. +++++.++++||.+..+.
T Consensus 72 ----~~~~~~~~----~~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~ 141 (318)
T 2d81_A 72 ----ANMKSWSG----NQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDF 141 (318)
T ss_dssp ----HHHHHHBT----TTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESS
T ss_pred ----HHHHHhhc----ccCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCC
Confidence 01111100 001111222 3599999999999999999999888663 368899999999876544
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=1.3e-08 Score=87.56 Aligned_cols=113 Identities=14% Similarity=0.165 Sum_probs=69.5
Q ss_pred cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHH
Q psy4974 179 KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQY 258 (345)
Q Consensus 179 ~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (345)
++.|+||||||.+|+.++.+ |+.++++++++|........ +...
T Consensus 142 r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~~~~~~~~--------------------~~~~--------------- 185 (278)
T 2gzs_A 142 RRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPSLGRGYDA--------------------LLSR--------------- 185 (278)
T ss_dssp EEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGGGSTTHHH--------------------HHHH---------------
T ss_pred ceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcchhcCcch--------------------HHHH---------------
Confidence 68999999999999999999 99999999998854321000 0000
Q ss_pred HHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCC--------ChHHHHHHHhhc----CCcEEEEeCCCCCccccc
Q psy4974 259 VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMV--------STQQVQSLLNQL----KFCQYYQFSSGGHSCHIK 326 (345)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v--------~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~ 326 (345)
.... ... ..-..|+++.+|+.|... +....+++.+.+ -++++.++++++|....
T Consensus 186 -------~~~~-----~~~-~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~~~- 251 (278)
T 2gzs_A 186 -------VTAV-----EPL-QFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPMF- 251 (278)
T ss_dssp -------HHTS-----CTT-TTTTCEEEEEECCC-----------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHHH-
T ss_pred -------HHHh-----hcc-CCCCCcEEEEecCccccccccchhhhhHHHHHHHHHHHHcCCCeeEEEEcCCCCccchh-
Confidence 0000 000 112458999999999754 345666665554 25688999988997432
Q ss_pred ChHHHHHHHHHHHHhhc
Q psy4974 327 HGQVFNEISRNFILEEN 343 (345)
Q Consensus 327 ~~~~~~~~i~~fl~~~~ 343 (345)
.+.+.+.+. ||.+..
T Consensus 252 -~~~~~~~l~-fl~~~~ 266 (278)
T 2gzs_A 252 -NASFRQALL-DISGEN 266 (278)
T ss_dssp -HHHHHHHHH-HHTTC-
T ss_pred -HHHHHHHHH-HHhhCC
Confidence 234555444 776543
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.79 E-value=4.2e-08 Score=86.35 Aligned_cols=127 Identities=6% Similarity=-0.024 Sum_probs=79.6
Q ss_pred HHHHHHHHHHh-CCc-cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHH
Q psy4974 165 VDIAYELLKLL-GVC-KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLK 242 (345)
Q Consensus 165 ~~~~~~~l~~~-~~~-~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (345)
.+++..+++.. ... ...|+||||||..|+.++.++|+.+.+++.++|........ .
T Consensus 122 ~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w~~~~~----------------~------ 179 (331)
T 3gff_A 122 EKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLWFDSPH----------------Y------ 179 (331)
T ss_dssp HHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTTTTTTH----------------H------
T ss_pred HHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCchhhheeeEeCchhcCChHH----------------H------
Confidence 34455555442 222 34799999999999999999999999999999875421100 0
Q ss_pred HcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCC-------CCChHHHHHHHhhcC------
Q psy4974 243 AYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDV-------MVSTQQVQSLLNQLK------ 309 (345)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~-------~v~~~~~~~~~~~~~------ 309 (345)
...+..... .....+.|+++.+|+.|. .++....+++.+.+.
T Consensus 180 ----------------~~~~~~~~~---------~~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~~~~l~~~Lk~~~~~g 234 (331)
T 3gff_A 180 ----------------LTLLEERVV---------KGDFKQKQLFMAIANNPLSPGFGVSSYHKDLNLAFADKLTKLAPKG 234 (331)
T ss_dssp ----------------HHHHHHHHH---------HCCCSSEEEEEEECCCSEETTTEECCHHHHHHHHHHHHHHHHCCTT
T ss_pred ----------------HHHHHHHhh---------cccCCCCeEEEEeCCCCCCCccchHHHHHHHHHHHHHHHHhccCCC
Confidence 000000000 011235799999999998 344455555554441
Q ss_pred -CcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 310 -FCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 310 -~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
++++.++++.+|.... +..+.+.+..++.
T Consensus 235 ~~~~~~~~pg~~H~sv~--~~~~~~~l~~lf~ 264 (331)
T 3gff_A 235 LGFMAKYYPEETHQSVS--HIGLYDGIRHLFK 264 (331)
T ss_dssp EEEEEEECTTCCTTTHH--HHHHHHHHHHHHG
T ss_pred ceEEEEECCCCCccccH--HHHHHHHHHHHHh
Confidence 3678899999998654 5556666555554
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.74 E-value=2.1e-08 Score=104.15 Aligned_cols=205 Identities=13% Similarity=0.127 Sum_probs=115.7
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
.++++|+|+.++.. ..|..++..|. . +.|++++.++ .. +.++...+.+
T Consensus 1058 ~~~L~~l~~~~g~~-~~y~~la~~L~-~-~~v~~l~~~~-------------~~----------------~~~~~~~~~i 1105 (1304)
T 2vsq_A 1058 EQIIFAFPPVLGYG-LMYQNLSSRLP-S-YKLCAFDFIE-------------EE----------------DRLDRYADLI 1105 (1304)
T ss_dssp CCEEECCCCTTCBG-GGGHHHHTTCC-S-CEEEECBCCC-------------ST----------------THHHHHHHHH
T ss_pred CCcceeecccccch-HHHHHHHhccc-c-cceEeecccC-------------HH----------------HHHHHHHHHH
Confidence 35899999999985 88999988887 4 9999988766 31 1133344555
Q ss_pred HHhCC-ccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCC
Q psy4974 173 KLLGV-CKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDV 248 (345)
Q Consensus 173 ~~~~~-~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (345)
..+.. .++.++|||+||.+|..+|.+.. ..+..++++++.............. ......+........
T Consensus 1106 ~~~~~~gp~~l~G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~ 1177 (1304)
T 2vsq_A 1106 QKLQPEGPLTLFGYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVSDLDGRTV--------ESDVEALMNVNRDNE 1177 (1304)
T ss_dssp HHHCCSSCEEEEEETTHHHHHHHHHHHHHHSSCCEEEEEEESCCEECSCC-----CH--------HHHHHHHHTTCC---
T ss_pred HHhCCCCCeEEEEecCCchHHHHHHHHHHhCCCceeEEEEecCcccccccccccccc--------hhhHHHHHHhhhhhh
Confidence 55543 48999999999999999997643 4588899998754322110000000 000000110000000
Q ss_pred -chhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc-CCcEEEEeCCCCCccccc
Q psy4974 249 -NYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL-KFCQYYQFSSGGHSCHIK 326 (345)
Q Consensus 249 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~ 326 (345)
.............+...+...... . .-..+++|++++.|+.|.. +......+.... ...+++.++ ++|+.+++
T Consensus 1178 ~~~~~~l~~~~l~~~~~~~~~~~~~--~-~~~~~~~pv~l~~~~~~~~-~~~~~~~W~~~~~~~~~~~~v~-G~H~~ml~ 1252 (1304)
T 2vsq_A 1178 ALNSEAVKHGLKQKTHAFYSYYVNL--I-STGQVKADIDLLTSGADFD-IPEWLASWEEATTGVYRMKRGF-GTHAEMLQ 1252 (1304)
T ss_dssp ----CTTTGGGHHHHHHHHHHHHC--------CBSSEEEEEECSSCCC-CCSSEECSSTTBSSCCCEEECS-SCTTGGGS
T ss_pred hhcchhcchHHHHHHHHHHHHHHHH--h-ccCCcCCCEEEEEecCccc-cccchhhHHHHhCCCeEEEEeC-CCHHHHCC
Confidence 000000011111111112111111 0 0156789999999998863 222223344433 345788887 79998886
Q ss_pred Ch--HHHHHHHHHHHHhh
Q psy4974 327 HG--QVFNEISRNFILEE 342 (345)
Q Consensus 327 ~~--~~~~~~i~~fl~~~ 342 (345)
.| +++++.|.+||.+.
T Consensus 1253 ~~~~~~~a~~l~~~L~~~ 1270 (1304)
T 2vsq_A 1253 GETLDRNAEILLEFLNTQ 1270 (1304)
T ss_dssp HHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHhcc
Confidence 54 58899999999754
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.69 E-value=5.7e-08 Score=90.18 Aligned_cols=111 Identities=11% Similarity=0.011 Sum_probs=64.7
Q ss_pred CceEEEEcCcC---CCchhhHHHHHHhhCCCC-eEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 93 AQVLFFTYGVL---GEIRNSFKKQLTAFDPKL-FTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 93 ~p~vv~lHG~~---~~~~~~~~~~~~~L~~~G-~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.|+||++||++ ++. ..+......|+++| +.|+.+|+|.. ..+++.+............+.+....+
T Consensus 97 ~PviV~iHGGg~~~g~~-~~~~~~~~~la~~g~~vvv~~nYRlg---------~~Gf~~~~~~~~~~~~n~gl~D~~~al 166 (489)
T 1qe3_A 97 LPVMVWIHGGAFYLGAG-SEPLYDGSKLAAQGEVIVVTLNYRLG---------PFGFLHLSSFDEAYSDNLGLLDQAAAL 166 (489)
T ss_dssp EEEEEEECCSTTTSCCT-TSGGGCCHHHHHHHTCEEEEECCCCH---------HHHSCCCTTTCTTSCSCHHHHHHHHHH
T ss_pred CCEEEEECCCccccCCC-CCcccCHHHHHhcCCEEEEecCccCc---------ccccCccccccccCCCCcchHHHHHHH
Confidence 48999999976 332 22222344555554 99999999920 000443321110010111233333333
Q ss_pred HHHHHH---hCC--ccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCC
Q psy4974 169 YELLKL---LGV--CKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKS 213 (345)
Q Consensus 169 ~~~l~~---~~~--~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~ 213 (345)
..+.+. .+. ++|.|+|||.||.++..++... ++.++++|+.++..
T Consensus 167 ~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 167 KWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred HHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 323232 333 4899999999999988877653 46799999999866
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.3e-06 Score=75.52 Aligned_cols=120 Identities=11% Similarity=0.031 Sum_probs=66.0
Q ss_pred ceEEEEcCcCCCchhhHHHH---HHhhCCCCeEEEEeCCCCchhhhccCC-ccCCCC--CCCCCCCC---CCCccch-HH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQ---LTAFDPKLFTSIFWDPPGNVVLYLLGK-TCSGYG--QSLPKGRS---FVPFQYI-EE 163 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~---~~~L~~~G~~vi~~D~~G~~~~~~~g~-~~~~~G--~s~~~~~~---~~~~~~~-~~ 163 (345)
|+|.++||++++ ...|... .+.+.+.|..++.+|..-++...-.+. .....| .+...+.. +.....+ ..
T Consensus 50 PVLYlLhG~~~~-~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~ 128 (299)
T 4fol_A 50 PTVFYLSGLTCT-PDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDY 128 (299)
T ss_dssp CEEEEECCTTCC-HHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHH
T ss_pred CEEEEECCCCCC-hHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHHHH
Confidence 799999999999 4888653 233444578888888532111110010 000011 00000000 0000012 23
Q ss_pred HHHHHHHHHHH-hCC---------ccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 164 DVDIAYELLKL-LGV---------CKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 164 ~~~~~~~~l~~-~~~---------~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
.++++..+++. +.. ++..|.||||||.-|+.+|.++ |+...++...++...
T Consensus 129 l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~ 191 (299)
T 4fol_A 129 IHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIVN 191 (299)
T ss_dssp HHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCCC
T ss_pred HHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccccC
Confidence 46666666654 322 3689999999999999999986 455666666665443
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.57 E-value=1.7e-05 Score=73.15 Aligned_cols=61 Identities=13% Similarity=0.264 Sum_probs=50.3
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhhcC-------------------------------------CcEEEEeCCCCCccc
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQLK-------------------------------------FCQYYQFSSGGHSCH 324 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~gH~~~ 324 (345)
.++||+.+|+.|.+++.-..+.+.+.+. +.+++.+.+|||.+.
T Consensus 372 girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmVP 451 (483)
T 1ac5_A 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccCc
Confidence 4799999999999999877766544331 245677889999999
Q ss_pred ccChHHHHHHHHHHHHhh
Q psy4974 325 IKHGQVFNEISRNFILEE 342 (345)
Q Consensus 325 ~~~~~~~~~~i~~fl~~~ 342 (345)
.++|++..+.+..||...
T Consensus 452 ~dqP~~al~m~~~fl~~~ 469 (483)
T 1ac5_A 452 FDKSLVSRGIVDIYSNDV 469 (483)
T ss_dssp HHCHHHHHHHHHHHTTCC
T ss_pred chhHHHHHHHHHHHHCCc
Confidence 999999999999999754
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.49 E-value=2e-07 Score=86.68 Aligned_cols=121 Identities=15% Similarity=0.040 Sum_probs=73.7
Q ss_pred cCceEEEEEcC---CCCceEEEEcCcC---CCchhhHHHHHHhhCCCC-eEEEEeCCC----CchhhhccCCccCCCCCC
Q psy4974 80 KGCDIRFIKYG---SGAQVLFFTYGVL---GEIRNSFKKQLTAFDPKL-FTSIFWDPP----GNVVLYLLGKTCSGYGQS 148 (345)
Q Consensus 80 ~g~~l~~~~~g---~~~p~vv~lHG~~---~~~~~~~~~~~~~L~~~G-~~vi~~D~~----G~~~~~~~g~~~~~~G~s 148 (345)
+...+...... ...|+||++||++ ++. ..+......|+++| +.|+.+|+| | ++.+
T Consensus 83 dcl~l~v~~P~~~~~~~Pviv~iHGGg~~~g~~-~~~~~~~~~la~~~~~vvv~~nYRlg~~G-------------f~~~ 148 (498)
T 2ogt_A 83 DGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSG-SSPWYDGTAFAKHGDVVVVTINYRMNVFG-------------FLHL 148 (498)
T ss_dssp CCCEEEEEESCSSSCCEEEEEEECCSTTTSCCT-TCGGGCCHHHHHHHTCEEEEECCCCHHHH-------------CCCC
T ss_pred CCcEEEEEecCCCCCCCcEEEEEcCCccCCCCC-CCCcCCHHHHHhCCCEEEEeCCCcCchhh-------------ccCc
Confidence 44445444332 2348999999987 443 33222345566555 999999999 6 6665
Q ss_pred CCCCC---CCCCccchHHHHHHHHHHHHH---hC--CccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 149 LPKGR---SFVPFQYIEEDVDIAYELLKL---LG--VCKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 149 ~~~~~---~~~~~~~~~~~~~~~~~~l~~---~~--~~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
..... .......+.+....+..+.+. ++ .++|.|+|+|.||.++..++... +..++++|+.++...
T Consensus 149 ~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 149 GDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp TTTTCGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred hhhccccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 43211 110111233444444333333 33 34899999999999998887653 346999999998654
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=8e-06 Score=72.45 Aligned_cols=36 Identities=8% Similarity=0.054 Sum_probs=31.4
Q ss_pred ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 178 CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 178 ~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
++|.++|||+||..|+.+++..+ +|+.+|..++...
T Consensus 219 ~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~~ 254 (433)
T 4g4g_A 219 KRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGAG 254 (433)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCTT
T ss_pred hHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCCC
Confidence 58999999999999999999875 8999999886543
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=3.5e-05 Score=69.55 Aligned_cols=61 Identities=18% Similarity=0.310 Sum_probs=50.0
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhhcC-------------------------------CcEEEEeCCCCCcccccChHH
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQLK-------------------------------FCQYYQFSSGGHSCHIKHGQV 330 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-------------------------------~~~~~~~~~~gH~~~~~~~~~ 330 (345)
.++||+.+|+.|.+++.-..+.+.+.+. +.+++.+.++||.+..++|++
T Consensus 327 girVlIysGd~D~i~~~~Gt~~wi~~L~w~~~~~F~~a~~~~w~~~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~ 406 (421)
T 1cpy_A 327 DLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPEN 406 (421)
T ss_dssp TCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEECEETTEEEEEETTCCSSHHHHCHHH
T ss_pred CCeEEEEECCcccccChHHHHHHHHhccCccchhhhhccccceEEcCCCceeeEEEEeccEEEEEECCCcccCcccCHHH
Confidence 5799999999999999876666554431 235677889999999999999
Q ss_pred HHHHHHHHHHhh
Q psy4974 331 FNEISRNFILEE 342 (345)
Q Consensus 331 ~~~~i~~fl~~~ 342 (345)
..+.+.+||...
T Consensus 407 al~m~~~fl~g~ 418 (421)
T 1cpy_A 407 ALSMVNEWIHGG 418 (421)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHhcCc
Confidence 999999999753
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=1.1e-07 Score=103.27 Aligned_cols=93 Identities=14% Similarity=0.235 Sum_probs=0.0
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
..++++|+|+.+++. ..|..+...|. ..|+.+..|| .- ...+++++++.+.+.
T Consensus 2241 ~~~~Lfc~~~agG~~-~~y~~l~~~l~---~~v~~lq~pg-------------~~----------~~~~i~~la~~~~~~ 2293 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSI-TVFHGLAAKLS---IPTYGLQCTG-------------AA----------PLDSIQSLASYYIEC 2293 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccH-HHHHHHHHhhC---CcEEEEecCC-------------CC----------CCCCHHHHHHHHHHH
Confidence 346899999999985 88888888774 6888888777 21 122556667766666
Q ss_pred HHHhC-CccEEEEEeChhHHHHHHHHHhCC---cccc---eeeEecc
Q psy4974 172 LKLLG-VCKVSLFGWCDGGHLSFVFSMKYP---HMVH---KLVIWGT 211 (345)
Q Consensus 172 l~~~~-~~~i~lvGhS~Gg~ia~~~a~~~p---~~v~---~lvl~~~ 211 (345)
+.... ..++.++|||+||.+|.++|.+.. ..+. .++++++
T Consensus 2294 i~~~~p~gpy~L~G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2294 IRQVQPEGPYRIAGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp -----------------------------------------------
T ss_pred HHHhCCCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEeC
Confidence 55543 358999999999999999997653 2344 6777776
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.20 E-value=8.4e-07 Score=83.42 Aligned_cols=108 Identities=12% Similarity=-0.002 Sum_probs=62.8
Q ss_pred ceEEEEcCcCC---CchhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCC-CCCCCCCCccchHHHHHHH
Q psy4974 94 QVLFFTYGVLG---EIRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSL-PKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 94 p~vv~lHG~~~---~~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~-~~~~~~~~~~~~~~~~~~~ 168 (345)
|+||++||++. +. .........|+. .|+.|+.+++|-. ..|++.+. .+.... . ..+.+....+
T Consensus 113 Pviv~iHGGg~~~g~~-~~~~~~~~~la~~~g~vvv~~nYRlg---------~~Gf~~~~~~~~~~~-n-~gl~D~~~al 180 (543)
T 2ha2_A 113 PVLIWIYGGGFYSGAA-SLDVYDGRFLAQVEGAVLVSMNYRVG---------TFGFLALPGSREAPG-N-VGLLDQRLAL 180 (543)
T ss_dssp EEEEEECCSTTTCCCT-TSGGGCTHHHHHHHCCEEEEECCCCH---------HHHHCCCTTCSSCCS-C-HHHHHHHHHH
T ss_pred eEEEEECCCccccCCC-CCCcCChHHHHhcCCEEEEEeccccc---------ccccccCCCCCCCCC-c-ccHHHHHHHH
Confidence 89999999763 32 211112234444 5899999999930 00033331 111111 1 1233444333
Q ss_pred HHHHHH---hCC--ccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCC
Q psy4974 169 YELLKL---LGV--CKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKS 213 (345)
Q Consensus 169 ~~~l~~---~~~--~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~ 213 (345)
..+.+. ++. ++|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 181 ~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 181 QWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred HHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 333333 343 4899999999999988776643 35789999998854
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.20 E-value=6.8e-05 Score=65.69 Aligned_cols=36 Identities=11% Similarity=-0.004 Sum_probs=31.1
Q ss_pred ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 178 CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 178 ~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
++|.++|||+||..|+.+|+..+ +|+.+|..++...
T Consensus 185 ~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~~ 220 (375)
T 3pic_A 185 TKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGAG 220 (375)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTT
T ss_pred hhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCCC
Confidence 48999999999999999999875 7999998876543
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.20 E-value=8.4e-07 Score=83.53 Aligned_cols=109 Identities=17% Similarity=0.097 Sum_probs=65.7
Q ss_pred CceEEEEcCcCC---CchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 93 AQVLFFTYGVLG---EIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 93 ~p~vv~lHG~~~---~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
.|+||++||++. +. .........|++.|+.|+.+|+|... .| +..+...... ....+.+....+.
T Consensus 115 ~Pviv~iHGGg~~~g~~-~~~~~~~~~l~~~g~vvv~~nYRl~~----~G-----f~~~~~~~~~--~n~gl~D~~~al~ 182 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSG-DSDLHGPEYLVSKDVIVITFNYRLNV----YG-----FLSLNSTSVP--GNAGLRDMVTLLK 182 (551)
T ss_dssp EEEEEEECCSTTTSCCS-CTTTCBCTTGGGGSCEEEEECCCCHH----HH-----HCCCSSSSCC--SCHHHHHHHHHHH
T ss_pred CCEEEEEcCCccccCCC-cccccCHHHHHhCCeEEEEeCCcCCc----cc-----cccCcccCCC--CchhHHHHHHHHH
Confidence 479999999652 22 22222345677789999999999500 00 2222111111 1113444444443
Q ss_pred HHHHH---hCC--ccEEEEEeChhHHHHHHHHHh--CCcccceeeEeccCC
Q psy4974 170 ELLKL---LGV--CKVSLFGWCDGGHLSFVFSMK--YPHMVHKLVIWGTKS 213 (345)
Q Consensus 170 ~~l~~---~~~--~~i~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~ 213 (345)
.+.+. ++. ++|.|+|+|.||.++..++.. .+..++++|+.++..
T Consensus 183 wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 183 WVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp HHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred HHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 33333 343 489999999999999888765 345799999998864
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.17 E-value=1.3e-06 Score=81.86 Aligned_cols=110 Identities=14% Similarity=0.031 Sum_probs=64.2
Q ss_pred CceEEEEcCcC---CCchhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCC-CCCCCCCCCccchHHHHHH
Q psy4974 93 AQVLFFTYGVL---GEIRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQS-LPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 93 ~p~vv~lHG~~---~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s-~~~~~~~~~~~~~~~~~~~ 167 (345)
.|+||++||++ ++. .........|++ .|+.|+.+++|-. . -| ++.+ ..+.... . ..+.+....
T Consensus 107 ~Pv~v~iHGGg~~~g~~-~~~~~~~~~la~~~~~vvv~~nYRlg-~---~G-----f~~~~~~~~~~~-n-~gl~D~~~a 174 (529)
T 1p0i_A 107 ATVLIWIYGGGFQTGTS-SLHVYDGKFLARVERVIVVSMNYRVG-A---LG-----FLALPGNPEAPG-N-MGLFDQQLA 174 (529)
T ss_dssp EEEEEEECCSTTTSCCT-TCGGGCTHHHHHHHCCEEEEECCCCH-H---HH-----HCCCTTCTTSCS-C-HHHHHHHHH
T ss_pred CeEEEEECCCccccCCC-CccccChHHHhccCCeEEEEeccccc-c---cc-----cccCCCCCCCcC-c-ccHHHHHHH
Confidence 48999999976 222 221112234444 5899999999930 0 00 3332 1111111 1 123344433
Q ss_pred HHHHHH---HhCC--ccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 168 AYELLK---LLGV--CKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 168 ~~~~l~---~~~~--~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
+..+.+ .++. ++|.|+|+|.||..+..++... +..++++|+.++...
T Consensus 175 l~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 175 LQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp HHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred HHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 333333 3444 3899999999999998887654 357899999998643
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=9.2e-05 Score=61.77 Aligned_cols=128 Identities=13% Similarity=0.105 Sum_probs=83.4
Q ss_pred ceeeeEEEc---CceEEEEEcC-----CCCceEEEEcCcCCCchhhH-HHHHH------------------hhCCCCeEE
Q psy4974 72 FTEGFFSIK---GCDIRFIKYG-----SGAQVLFFTYGVLGEIRNSF-KKQLT------------------AFDPKLFTS 124 (345)
Q Consensus 72 ~~~~~~~~~---g~~l~~~~~g-----~~~p~vv~lHG~~~~~~~~~-~~~~~------------------~L~~~G~~v 124 (345)
....++.++ +..++|.-.. ..+|.+++++|++|++ ..+ -.+.+ .+.+. .++
T Consensus 19 ~~sGy~~v~~~~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcS-S~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~-anv 96 (255)
T 1whs_A 19 MYSGYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCS-SVAYGASEELGAFRVKPRGAGLVLNEYRWNKV-ANV 96 (255)
T ss_dssp EEEEEEEEETTTTEEEEEEEECCCGGGCSCCEEEEECCTTTBC-TTTTHHHHTSSSEEECGGGCCEEECTTCGGGT-SEE
T ss_pred EEEEEEECCCCCCcEEEEEEEEecCCCCCCCEEEEECCCCchH-HHHHHHHhccCCeEecCCCCeeeeCccccccc-CCE
Confidence 346677774 5677776432 2358999999999986 555 33321 11122 789
Q ss_pred EEeCC-CCchhhhccCCccCCCCCCCCCCC-CCCCccchHHHHHHHHHHHHH-------hCCccEEEEEeChhHHHHHHH
Q psy4974 125 IFWDP-PGNVVLYLLGKTCSGYGQSLPKGR-SFVPFQYIEEDVDIAYELLKL-------LGVCKVSLFGWCDGGHLSFVF 195 (345)
Q Consensus 125 i~~D~-~G~~~~~~~g~~~~~~G~s~~~~~-~~~~~~~~~~~~~~~~~~l~~-------~~~~~i~lvGhS~Gg~ia~~~ 195 (345)
+.+|. .| .|.|-.... .+ ...+.++.++++.++++. +...+++|+|+|+||..+..+
T Consensus 97 lfiDqPvG-------------tGfSy~~~~~~~-~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~l 162 (255)
T 1whs_A 97 LFLDSPAG-------------VGFSYTNTSSDI-YTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPEL 162 (255)
T ss_dssp EEECCSTT-------------STTCEESSGGGG-GSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHH
T ss_pred EEEecCCC-------------CccCCCcCcccc-ccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHH
Confidence 99996 48 777743321 11 123455667776666654 244689999999999988887
Q ss_pred HHhC------CcccceeeEeccCCCC
Q psy4974 196 SMKY------PHMVHKLVIWGTKSFL 215 (345)
Q Consensus 196 a~~~------p~~v~~lvl~~~~~~~ 215 (345)
|... .-.++++++.++....
T Consensus 163 a~~i~~~n~~~inLkGi~ign~~~d~ 188 (255)
T 1whs_A 163 SQLVHRSKNPVINLKGFMVGNGLIDD 188 (255)
T ss_dssp HHHHHHHTCSSCEEEEEEEEEECCBH
T ss_pred HHHHHHcCCcccccceEEecCCccCH
Confidence 7642 2358999999987664
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.06 E-value=2.1e-06 Score=80.55 Aligned_cols=111 Identities=9% Similarity=-0.028 Sum_probs=64.1
Q ss_pred CceEEEEcCcCCCc--hhhHHHHHHhhC-CCCeEEEEeCCCCchhhhccCCccCCCCCC-CCCCCCCCCccchHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEI--RNSFKKQLTAFD-PKLFTSIFWDPPGNVVLYLLGKTCSGYGQS-LPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 93 ~p~vv~lHG~~~~~--~~~~~~~~~~L~-~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s-~~~~~~~~~~~~~~~~~~~~ 168 (345)
.|+||++||++... ..........|+ +.|+.|+.+++|-. . -| +..+ ..+.... . ..+.+....+
T Consensus 109 ~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg-~---~G-----f~~~~~~~~~~~-n-~gl~D~~~al 177 (537)
T 1ea5_A 109 TTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVG-A---FG-----FLALHGSQEAPG-N-VGLLDQRMAL 177 (537)
T ss_dssp EEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCH-H---HH-----HCCCTTCSSSCS-C-HHHHHHHHHH
T ss_pred CeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCcc-c---cc-----cccCCCCCCCcC-c-cccHHHHHHH
Confidence 48999999965321 122111223444 56899999999930 0 00 3222 1111111 1 1344444444
Q ss_pred HHHHHH---hCC--ccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 169 YELLKL---LGV--CKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 169 ~~~l~~---~~~--~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
..+.+. ++. ++|.|+|+|.||..+..++... +..++++|+.++...
T Consensus 178 ~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 178 QWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred HHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 333333 343 4899999999999988877642 346999999998653
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=2.4e-06 Score=80.30 Aligned_cols=105 Identities=13% Similarity=0.159 Sum_probs=63.1
Q ss_pred CceEEEEcCcCC---CchhhHHHHHHhhC-CCCeEEEEeCCC-CchhhhccCCccCCCCCCCCC--CCCCCCccchHHHH
Q psy4974 93 AQVLFFTYGVLG---EIRNSFKKQLTAFD-PKLFTSIFWDPP-GNVVLYLLGKTCSGYGQSLPK--GRSFVPFQYIEEDV 165 (345)
Q Consensus 93 ~p~vv~lHG~~~---~~~~~~~~~~~~L~-~~G~~vi~~D~~-G~~~~~~~g~~~~~~G~s~~~--~~~~~~~~~~~~~~ 165 (345)
.|+||++||++. +. ..|... .|+ +.|+.|+.+|+| | . .| ++.+... ...+ .+.+..
T Consensus 115 ~Pv~v~iHGG~~~~g~~-~~~~~~--~la~~~g~vvv~~nYRlg--~---~g-----f~~~~~~~~~~n~----gl~D~~ 177 (542)
T 2h7c_A 115 LPVMVWIHGGGLMVGAA-STYDGL--ALAAHENVVVVTIQYRLG--I---WG-----FFSTGDEHSRGNW----GHLDQV 177 (542)
T ss_dssp EEEEEEECCSTTTSCCS-TTSCCH--HHHHHHTCEEEEECCCCH--H---HH-----HCCCSSTTCCCCH----HHHHHH
T ss_pred CCEEEEECCCcccCCCc-cccCHH--HHHhcCCEEEEecCCCCc--c---cc-----CCCCCcccCccch----hHHHHH
Confidence 389999999753 22 223221 233 358999999999 2 0 00 3322111 1122 233333
Q ss_pred HHHHHH---HHHhCC--ccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 166 DIAYEL---LKLLGV--CKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 166 ~~~~~~---l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
..+..+ +...+. ++|.|+|+|.||.++..++... +..++++|+.++...
T Consensus 178 ~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 178 AALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp HHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 333333 233343 4899999999999998888752 567999999988654
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.89 E-value=1e-05 Score=75.64 Aligned_cols=109 Identities=9% Similarity=0.043 Sum_probs=60.9
Q ss_pred CceEEEEcCcCCCc--hhhHH--HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC--CCCCCCccchHHHHH
Q psy4974 93 AQVLFFTYGVLGEI--RNSFK--KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK--GRSFVPFQYIEEDVD 166 (345)
Q Consensus 93 ~p~vv~lHG~~~~~--~~~~~--~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~--~~~~~~~~~~~~~~~ 166 (345)
.|+||++||++... ...|. .++.. ...|+.|+.+|+|-. ..|++.+... ...+ + ..+.+...
T Consensus 102 ~Pviv~iHGGg~~~g~~~~~~~~~~~~~-~~~g~vvv~~nYRlg---------~~Gf~~~~~~~~~~~~-n-~gl~D~~~ 169 (522)
T 1ukc_A 102 LPVWLFIQGGGYAENSNANYNGTQVIQA-SDDVIVFVTFNYRVG---------ALGFLASEKVRQNGDL-N-AGLLDQRK 169 (522)
T ss_dssp EEEEEEECCSTTTSCCSCSCCCHHHHHH-TTSCCEEEEECCCCH---------HHHHCCCHHHHHSSCT-T-HHHHHHHH
T ss_pred CCEEEEECCCccccCCccccCcHHHHHh-cCCcEEEEEeccccc---------ccccccchhccccCCC-C-hhHHHHHH
Confidence 38999999986321 12222 22221 355899999999930 0003332110 0011 1 12333333
Q ss_pred HHHHHHH---HhCC--ccEEEEEeChhHHHHHHHHHhC----CcccceeeEeccCC
Q psy4974 167 IAYELLK---LLGV--CKVSLFGWCDGGHLSFVFSMKY----PHMVHKLVIWGTKS 213 (345)
Q Consensus 167 ~~~~~l~---~~~~--~~i~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~ 213 (345)
.+..+.+ .++. ++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 170 al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 170 ALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp HHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred HHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 3333333 3343 4899999999998766655443 45789999988754
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=1.2e-05 Score=76.15 Aligned_cols=108 Identities=11% Similarity=-0.031 Sum_probs=60.9
Q ss_pred CceEEEEcCcCC---CchhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCC---------CCCCCCCCcc
Q psy4974 93 AQVLFFTYGVLG---EIRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSL---------PKGRSFVPFQ 159 (345)
Q Consensus 93 ~p~vv~lHG~~~---~~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~---------~~~~~~~~~~ 159 (345)
.|+||+|||++- +. .........|+. .|+.|+.+++|- +. -| +.... .....+
T Consensus 141 ~PV~v~iHGGg~~~g~~-~~~~~~~~~l~~~~~~vvv~~nYRl-g~---~G-----fl~~~~~~~~~~~~~~~~n~---- 206 (585)
T 1dx4_A 141 LPILIWIYGGGFMTGSA-TLDIYNADIMAAVGNVIVASFQYRV-GA---FG-----FLHLAPEMPSEFAEEAPGNV---- 206 (585)
T ss_dssp EEEEEEECCSTTTCCCT-TCGGGCCHHHHHHHTCEEEEECCCC-TH---HH-----HCCCGGGSCGGGTTSSCSCH----
T ss_pred CCEEEEECCCcccCCCC-CCCCCCchhhhccCCEEEEEecccc-cc---hh-----hcccccccccccCCCCCCcc----
Confidence 489999999753 21 211111233443 479999999992 00 00 22110 011111
Q ss_pred chHHHHHHHHHHHH---HhCC--ccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 160 YIEEDVDIAYELLK---LLGV--CKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 160 ~~~~~~~~~~~~l~---~~~~--~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
.+.+....+..+.+ .++. ++|.|+|+|.||..+..++... ...++++|+.++...
T Consensus 207 gl~D~~~al~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~~ 268 (585)
T 1dx4_A 207 GLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 268 (585)
T ss_dssp HHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred cHHHHHHHHHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhccccC
Confidence 23333333333322 2343 4899999999999887766543 356889999987643
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00021 Score=65.76 Aligned_cols=106 Identities=26% Similarity=0.354 Sum_probs=72.9
Q ss_pred eEEEEcCcCCCchhhHHH--HHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCC------CCCCCccchHHHH
Q psy4974 95 VLFFTYGVLGEIRNSFKK--QLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG------RSFVPFQYIEEDV 165 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~~~~--~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~------~~~~~~~~~~~~~ 165 (345)
||++.-|+-+.....+.. +...++++ |-.++.+++|- +|.|.+-. ... ..-+.++..
T Consensus 44 PIfl~~gGEg~~~~~~~~~g~~~~lA~~~~a~~v~lEHRy-------------YG~S~P~~~~st~~~nL-~yLt~eQAL 109 (472)
T 4ebb_A 44 PIFFYTGNEGDVWAFANNSAFVAELAAERGALLVFAEHRY-------------YGKSLPFGAQSTQRGHT-ELLTVEQAL 109 (472)
T ss_dssp CEEEEECCSSCHHHHHHHCHHHHHHHHHHTCEEEEECCTT-------------STTCCTTGGGGGSTTSC-TTCSHHHHH
T ss_pred cEEEEECCCccccccccCccHHHHHHHHhCCeEEEEeccc-------------ccCCcCCCCCCcccccc-ccCCHHHHH
Confidence 455555655552111111 22233333 67899999999 99997531 122 334667777
Q ss_pred HHHHHHHHHhC----C--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 166 DIAYELLKLLG----V--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 166 ~~~~~~l~~~~----~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.|+..+++.+. . .|++++|-|.||++|..+-.++|+.|.+.+.-+++..
T Consensus 110 aD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv~ 164 (472)
T 4ebb_A 110 ADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVL 164 (472)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccceE
Confidence 88887776652 2 3899999999999999999999999999998877543
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.72 E-value=1.4e-05 Score=75.08 Aligned_cols=108 Identities=11% Similarity=0.089 Sum_probs=62.5
Q ss_pred CceEEEEcCcCCCc--hhhH--HHHH-HhhC-CCCeEEEEeCCCCchhhhccCCccCCCCCCC----CCCCCCCCccchH
Q psy4974 93 AQVLFFTYGVLGEI--RNSF--KKQL-TAFD-PKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL----PKGRSFVPFQYIE 162 (345)
Q Consensus 93 ~p~vv~lHG~~~~~--~~~~--~~~~-~~L~-~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~----~~~~~~~~~~~~~ 162 (345)
.|+||++||++... ...| ..++ ..++ ..|+.|+.+|+|.... | +..+. .....+ .+.
T Consensus 122 ~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~----g-----f~~~~~~~~~~~~n~----gl~ 188 (544)
T 1thg_A 122 LPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPF----G-----FLGGDAITAEGNTNA----GLH 188 (544)
T ss_dssp EEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHH----H-----HCCSHHHHHHTCTTH----HHH
T ss_pred CcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcc----c-----CCCcccccccCCCch----hHH
Confidence 38999999976431 1222 2233 2233 3479999999997110 1 11100 001111 234
Q ss_pred HHHHHHHHHHHH---hCC--ccEEEEEeChhHHHHHHHHHhC--------CcccceeeEeccCC
Q psy4974 163 EDVDIAYELLKL---LGV--CKVSLFGWCDGGHLSFVFSMKY--------PHMVHKLVIWGTKS 213 (345)
Q Consensus 163 ~~~~~~~~~l~~---~~~--~~i~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~ 213 (345)
+....+..+.+. ++. ++|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 189 D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 189 DQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 444444333333 343 4899999999999888766642 45789999998754
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=2e-05 Score=73.83 Aligned_cols=112 Identities=13% Similarity=0.055 Sum_probs=61.7
Q ss_pred CceEEEEcCcCCC--chhhH--HHHHH-hh-CCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHH
Q psy4974 93 AQVLFFTYGVLGE--IRNSF--KKQLT-AF-DPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVD 166 (345)
Q Consensus 93 ~p~vv~lHG~~~~--~~~~~--~~~~~-~L-~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~ 166 (345)
.|+||++||++.. +...| ..++. .+ ...|+.|+.+|+|....-++.+.. . ........ .+.+...
T Consensus 114 ~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~---~--~~~~~~n~----gl~D~~~ 184 (534)
T 1llf_A 114 LPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDD---I--KAEGSGNA----GLKDQRL 184 (534)
T ss_dssp EEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHH---H--HHHTCTTH----HHHHHHH
T ss_pred ceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCccc---c--cccCCCch----hHHHHHH
Confidence 3899999998743 11223 22332 22 345799999999961100000000 0 00001111 2334444
Q ss_pred HHHHHHH---HhCC--ccEEEEEeChhHHHHHHHHHhC--------CcccceeeEeccCC
Q psy4974 167 IAYELLK---LLGV--CKVSLFGWCDGGHLSFVFSMKY--------PHMVHKLVIWGTKS 213 (345)
Q Consensus 167 ~~~~~l~---~~~~--~~i~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~ 213 (345)
.+..+.+ .++. ++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 185 Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 185 GMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred HHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 3333333 3443 4899999999998776655543 45789999998754
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00016 Score=61.33 Aligned_cols=83 Identities=12% Similarity=-0.068 Sum_probs=50.3
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEE-eCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIF-WDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~-~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
.+..||.+||...- .+.+.+.++.+.. .|.++ .+.- ... -...+....+++.+
T Consensus 73 ~~~iVva~RGT~~~--------~d~l~d~~~~~~~~~~~~~-------------~~~v---h~G--f~~~~~~~~~~~~~ 126 (269)
T 1tib_A 73 NKLIVLSFRGSRSI--------ENWIGNLNFDLKEINDICS-------------GCRG---HDG--FTSSWRSVADTLRQ 126 (269)
T ss_dssp TTEEEEEECCCSCT--------HHHHTCCCCCEEECTTTST-------------TCEE---EHH--HHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCH--------HHHHHhcCeeeeecCCCCC-------------CCEe---cHH--HHHHHHHHHHHHHH
Confidence 34588899998532 2345566677766 55554 2110 111 11233444555555
Q ss_pred HHHHh----CCccEEEEEeChhHHHHHHHHHhCC
Q psy4974 171 LLKLL----GVCKVSLFGWCDGGHLSFVFSMKYP 200 (345)
Q Consensus 171 ~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~p 200 (345)
+++.+ ...+++++||||||.+|..++....
T Consensus 127 ~~~~~~~~~~~~~i~l~GHSLGGalA~l~a~~l~ 160 (269)
T 1tib_A 127 KVEDAVREHPDYRVVFTGHSLGGALATVAGADLR 160 (269)
T ss_dssp HHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCceEEEecCChHHHHHHHHHHHHH
Confidence 54443 3348999999999999999998754
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=3.7e-05 Score=72.67 Aligned_cols=107 Identities=11% Similarity=0.063 Sum_probs=61.7
Q ss_pred CceEEEEcCcCCC--chhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGE--IRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 93 ~p~vv~lHG~~~~--~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
.|+||+|||++.. +...+.. ..|+.. |+.|+.+|+|- +. .| +..+....... + ..+.+....+.
T Consensus 131 ~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl-~~---~G-----fl~~~~~~~~~-n-~gl~D~~~al~ 197 (574)
T 3bix_A 131 KPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRL-GV---LG-----FLSTGDQAAKG-N-YGLLDLIQALR 197 (574)
T ss_dssp EEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCC-HH---HH-----HCCCSSSSCCC-C-HHHHHHHHHHH
T ss_pred CcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcC-cc---cc-----cCcCCCCCCCC-c-ccHHHHHHHHH
Confidence 4899999997633 1122322 234443 59999999994 00 01 22111111111 1 13444444444
Q ss_pred HHHHH---hCC--ccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccC
Q psy4974 170 ELLKL---LGV--CKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTK 212 (345)
Q Consensus 170 ~~l~~---~~~--~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~ 212 (345)
.+.+. ++. ++|.|+|+|.||.++..++.... ..+.++|+.++.
T Consensus 198 wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 198 WTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp HHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred HHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 33333 444 48999999999999988876543 357888888764
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=97.55 E-value=4e-05 Score=72.38 Aligned_cols=108 Identities=9% Similarity=0.083 Sum_probs=60.3
Q ss_pred CceEEEEcCcCCCc--hhhH------HHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCC--CCCCCCCCccch
Q psy4974 93 AQVLFFTYGVLGEI--RNSF------KKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSL--PKGRSFVPFQYI 161 (345)
Q Consensus 93 ~p~vv~lHG~~~~~--~~~~------~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~--~~~~~~~~~~~~ 161 (345)
.|+||+|||++... .... ......|+. .|+.|+.+++|-... | +..+. .....+ .+
T Consensus 98 ~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~----G-----fl~~~~~~~pgn~----gl 164 (579)
T 2bce_A 98 LPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPL----G-----FLSTGDSNLPGNY----GL 164 (579)
T ss_dssp EEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHH----H-----HCCCSSTTCCCCH----HH
T ss_pred CeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccc----c-----CCcCCCCCCCCcc----ch
Confidence 38999999986321 1100 001123333 369999999993000 0 22221 111111 23
Q ss_pred HHHHHHHHHH---HHHhCC--ccEEEEEeChhHHHHHHHHHh--CCcccceeeEeccCC
Q psy4974 162 EEDVDIAYEL---LKLLGV--CKVSLFGWCDGGHLSFVFSMK--YPHMVHKLVIWGTKS 213 (345)
Q Consensus 162 ~~~~~~~~~~---l~~~~~--~~i~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~ 213 (345)
.+....+..+ +..++. ++|.|+|+|.||..+..++.. ....+++.|+.++..
T Consensus 165 ~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 165 WDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCCc
Confidence 4444333333 333444 489999999999998887754 235688999887643
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00026 Score=54.50 Aligned_cols=61 Identities=13% Similarity=0.191 Sum_probs=54.3
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhhcC------------------------CcEEEEeCCCCCcccccChHHHHHHHHH
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQLK------------------------FCQYYQFSSGGHSCHIKHGQVFNEISRN 337 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 337 (345)
.++||+.+|+.|.+++.-..+.+.+.+. +.++..+.++||....++|++..+.+..
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~~ 143 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQY 143 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHHH
Confidence 5799999999999999888888887764 5678889999999999999999999999
Q ss_pred HHHhh
Q psy4974 338 FILEE 342 (345)
Q Consensus 338 fl~~~ 342 (345)
||...
T Consensus 144 fl~~~ 148 (153)
T 1whs_B 144 FLQGK 148 (153)
T ss_dssp HHHTC
T ss_pred HHCCC
Confidence 99754
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00094 Score=56.93 Aligned_cols=38 Identities=13% Similarity=-0.001 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHH----hCCccEEEEEeChhHHHHHHHHHhCC
Q psy4974 163 EDVDIAYELLKL----LGVCKVSLFGWCDGGHLSFVFSMKYP 200 (345)
Q Consensus 163 ~~~~~~~~~l~~----~~~~~i~lvGhS~Gg~ia~~~a~~~p 200 (345)
...+++.+.++. ....++++.||||||.+|..+|....
T Consensus 118 ~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 118 LVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLR 159 (279)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHH
Confidence 334444444433 33358999999999999999888753
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0023 Score=54.24 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHHHHh----CCccEEEEEeChhHHHHHHHHHhC
Q psy4974 161 IEEDVDIAYELLKLL----GVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 161 ~~~~~~~~~~~l~~~----~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
+....+++.+.++.+ ...++.++||||||.+|..+|...
T Consensus 115 ~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 115 YGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 444455554444433 334699999999999999988765
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.067 Score=45.59 Aligned_cols=128 Identities=14% Similarity=0.105 Sum_probs=80.9
Q ss_pred ceeeeEEE-cCceEEEEEcC-----CCCceEEEEcCcCCCchhhHHHHHHh----hCCCC-------------eEEEEeC
Q psy4974 72 FTEGFFSI-KGCDIRFIKYG-----SGAQVLFFTYGVLGEIRNSFKKQLTA----FDPKL-------------FTSIFWD 128 (345)
Q Consensus 72 ~~~~~~~~-~g~~l~~~~~g-----~~~p~vv~lHG~~~~~~~~~~~~~~~----L~~~G-------------~~vi~~D 128 (345)
....++++ ++..++|.-.. ..+|.+|++-|++|++ ..+-.+.+. +...| .+++.+|
T Consensus 23 ~ysGyv~v~~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcS-S~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD 101 (300)
T 4az3_A 23 QYSGYLKGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCS-SLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLE 101 (300)
T ss_dssp EEEEEEECSTTEEEEEEEECCSSCTTTSCEEEEECCTTTBC-THHHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEEC
T ss_pred eeeeeeecCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHH-HHHHHHhcCCCceecCCCccccccCccHHhhhcchhhc
Confidence 34677777 56777776543 2348999999999986 665443321 01111 5688898
Q ss_pred CC-CchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHH-------hCCccEEEEEeChhHHHHHHHHHhC-
Q psy4974 129 PP-GNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKL-------LGVCKVSLFGWCDGGHLSFVFSMKY- 199 (345)
Q Consensus 129 ~~-G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~i~lvGhS~Gg~ia~~~a~~~- 199 (345)
.| | .|.|-.....+ ..+..+.++++..++.. +...+++|.|-|.||..+..+|...
T Consensus 102 ~PvG-------------tGfSy~~~~~~--~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~ 166 (300)
T 4az3_A 102 SPAG-------------VGFSYSDDKFY--ATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVM 166 (300)
T ss_dssp CSTT-------------STTCEETTCCC--CCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHT
T ss_pred CCCc-------------ccccccCCCcc--cccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHH
Confidence 66 6 66664333222 22445556666655543 2345899999999999888887642
Q ss_pred ---CcccceeeEeccCCCC
Q psy4974 200 ---PHMVHKLVIWGTKSFL 215 (345)
Q Consensus 200 ---p~~v~~lvl~~~~~~~ 215 (345)
.-.++++++-++....
T Consensus 167 ~~~~inLkG~~iGNg~~d~ 185 (300)
T 4az3_A 167 QDPSMNLQGLAVGNGLSSY 185 (300)
T ss_dssp TCTTSCEEEEEEESCCSBH
T ss_pred hCCCcccccceecCCccCH
Confidence 2347888888886653
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.014 Score=48.95 Aligned_cols=124 Identities=13% Similarity=0.097 Sum_probs=72.2
Q ss_pred eeeeEEEc---CceEEEEEcCC------CCceEEEEcCcCCCchhhH-HHHHH---h--------h-------CCCCeEE
Q psy4974 73 TEGFFSIK---GCDIRFIKYGS------GAQVLFFTYGVLGEIRNSF-KKQLT---A--------F-------DPKLFTS 124 (345)
Q Consensus 73 ~~~~~~~~---g~~l~~~~~g~------~~p~vv~lHG~~~~~~~~~-~~~~~---~--------L-------~~~G~~v 124 (345)
...++.++ +..++|.-... .+|.+++++|++|++ ..+ -.+.+ . | .+. .++
T Consensus 25 ~sGyv~v~~~~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcS-S~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~-anl 102 (270)
T 1gxs_A 25 YGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCS-SIGLGAMQELGAFRVHTNGESLLLNEYAWNKA-ANI 102 (270)
T ss_dssp EEEEEEEETTTTEEEEEEEECCCSSCGGGSCEEEEEECTTTBC-TTTTHHHHTTSSEEECTTSSCEEECTTCGGGT-SEE
T ss_pred EEEEEEcCCCCCcEEEEEEEEecCCCCCCCCEEEEecCCCccc-chhhhhHHhccCceecCCCCcceeCccchhcc-ccE
Confidence 46777774 45777754322 248999999999986 554 43331 0 1 112 679
Q ss_pred EEeCC-CCchhhhccCCccCCCCCCCCCCC-CCCCccchHHHHHHHHHHHHH-------hCCccEEEEEeChhHHHHHHH
Q psy4974 125 IFWDP-PGNVVLYLLGKTCSGYGQSLPKGR-SFVPFQYIEEDVDIAYELLKL-------LGVCKVSLFGWCDGGHLSFVF 195 (345)
Q Consensus 125 i~~D~-~G~~~~~~~g~~~~~~G~s~~~~~-~~~~~~~~~~~~~~~~~~l~~-------~~~~~i~lvGhS~Gg~ia~~~ 195 (345)
+.+|. .| .|.|-.... .+ . .+-++.++++.++++. +...+++|.|.| |-++ ..+
T Consensus 103 lfiDqPvG-------------tGfSy~~~~~~~-~-~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yv-P~l 165 (270)
T 1gxs_A 103 LFAESPAG-------------VGFSYSNTSSDL-S-MGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFI-PQL 165 (270)
T ss_dssp EEECCSTT-------------STTCEESSGGGG-C-CCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHH-HHH
T ss_pred EEEecccc-------------ccccCCCCCccc-c-CCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-Ccch-HHH
Confidence 99995 57 777643221 11 1 1223345555544443 344589999999 6443 333
Q ss_pred HH----hC----CcccceeeEeccCCCC
Q psy4974 196 SM----KY----PHMVHKLVIWGTKSFL 215 (345)
Q Consensus 196 a~----~~----p~~v~~lvl~~~~~~~ 215 (345)
|. .. .-.++++++.++....
T Consensus 166 a~~i~~~n~~~~~inLkGi~ign~~~d~ 193 (270)
T 1gxs_A 166 SQVVYRNRNNSPFINFQGLLVSSGLTND 193 (270)
T ss_dssp HHHHHHTTTTCTTCEEEEEEEESCCCBH
T ss_pred HHHHHhccccccceeeeeEEEeCCccCh
Confidence 32 22 1357899999887664
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0045 Score=47.62 Aligned_cols=61 Identities=10% Similarity=0.207 Sum_probs=50.8
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhhcC-----------------------------CcEEEEeCCCCCcccccChHHHH
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQLK-----------------------------FCQYYQFSSGGHSCHIKHGQVFN 332 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-----------------------------~~~~~~~~~~gH~~~~~~~~~~~ 332 (345)
.++||+.+|+.|.+++.-..+.+.+.+. +.+++.+.+|||....++|++..
T Consensus 63 girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al 142 (155)
T 4az3_B 63 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 142 (155)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHHH
T ss_pred CceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHHH
Confidence 5799999999999999877777665541 23467788999999999999999
Q ss_pred HHHHHHHHhh
Q psy4974 333 EISRNFILEE 342 (345)
Q Consensus 333 ~~i~~fl~~~ 342 (345)
+.+.+||...
T Consensus 143 ~m~~~fl~g~ 152 (155)
T 4az3_B 143 TMFSRFLNKQ 152 (155)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999999753
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.006 Score=51.59 Aligned_cols=26 Identities=23% Similarity=0.254 Sum_probs=21.2
Q ss_pred HhCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 174 LLGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 174 ~~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
.....++++.||||||.+|..++...
T Consensus 133 ~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 133 AHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HCCCCeEEEeccChHHHHHHHHHHHH
Confidence 33445899999999999999888765
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.015 Score=48.28 Aligned_cols=101 Identities=12% Similarity=0.071 Sum_probs=61.9
Q ss_pred CCceEEEEcCcCCCch---hhHHHHHHhhCCCCeEEEEe-CCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIR---NSFKKQLTAFDPKLFTSIFW-DPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~---~~~~~~~~~L~~~G~~vi~~-D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
++|.|++.||.+.... ..-..+++.|..+ +.+-.+ ++|- .. ..| . .+..+-+++
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~-~~~q~Vg~YpA-------------~~------~~y-~-~S~~~G~~~ 59 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDI-YRWQPIGNYPA-------------AA------FPM-W-PSVEKGVAE 59 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTT-SEEEECCSCCC-------------CS------SSC-H-HHHHHHHHH
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHh-cCCCccccccC-------------cc------cCc-c-chHHHHHHH
Confidence 3579999999876421 2345677777765 555445 3555 21 111 1 122333344
Q ss_pred HHHHHH----HhCCccEEEEEeChhHHHHHHHHHh-----------CCcccceeeEeccCCC
Q psy4974 168 AYELLK----LLGVCKVSLFGWCDGGHLSFVFSMK-----------YPHMVHKLVIWGTKSF 214 (345)
Q Consensus 168 ~~~~l~----~~~~~~i~lvGhS~Gg~ia~~~a~~-----------~p~~v~~lvl~~~~~~ 214 (345)
+.+.++ +-...+++|.|+|+|+.++-.++.. ..++|.++++++-+..
T Consensus 60 ~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~r 121 (254)
T 3hc7_A 60 LILQIELKLDADPYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMR 121 (254)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTTC
T ss_pred HHHHHHHHHhhCCCCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCCC
Confidence 444433 3345699999999999999887654 2357889999875443
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0084 Score=50.45 Aligned_cols=44 Identities=11% Similarity=0.140 Sum_probs=29.0
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCC
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSF 214 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~ 214 (345)
++++.....++.+.|||+||.+|..+|.... ..+. ++..+++..
T Consensus 117 ~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~Prv 163 (261)
T 1uwc_A 117 QQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGEPRS 163 (261)
T ss_dssp HHHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESCCCC
T ss_pred HHHHHCCCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecCCCC
Confidence 3333334458999999999999998887632 3454 555555433
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.022 Score=48.38 Aligned_cols=49 Identities=14% Similarity=0.162 Sum_probs=32.4
Q ss_pred HHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC----CcccceeeEeccCCCC
Q psy4974 167 IAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY----PHMVHKLVIWGTKSFL 215 (345)
Q Consensus 167 ~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~~ 215 (345)
.+..+++.....++.+.|||+||.+|..+|... |.....++..+++...
T Consensus 127 ~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~PrvG 179 (279)
T 3uue_A 127 AVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLPRLG 179 (279)
T ss_dssp HHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESCCCCB
T ss_pred HHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecCCCcC
Confidence 334444555556899999999999999887653 3334455655554443
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.023 Score=47.56 Aligned_cols=31 Identities=16% Similarity=0.186 Sum_probs=23.2
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHh
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
+.++++.....++.+.|||+||.+|..+|..
T Consensus 114 l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 114 VKALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 3344444455689999999999999887765
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.12 E-value=0.019 Score=44.21 Aligned_cols=61 Identities=18% Similarity=0.255 Sum_probs=51.0
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhhcC---------------------------CcEEEEeCCCCCcccccChHHHHHH
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQLK---------------------------FCQYYQFSSGGHSCHIKHGQVFNEI 334 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~~~---------------------------~~~~~~~~~~gH~~~~~~~~~~~~~ 334 (345)
.++||+.+|+.|.+++.-..+.+.+.+. +.++..+.++||....++|++..+.
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~m 145 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFLL 145 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHHH
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHHH
Confidence 5789999999999999877777766541 1356778899999999999999999
Q ss_pred HHHHHHhh
Q psy4974 335 SRNFILEE 342 (345)
Q Consensus 335 i~~fl~~~ 342 (345)
+..||...
T Consensus 146 ~~~fl~g~ 153 (158)
T 1gxs_B 146 FKQFLKGE 153 (158)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCC
Confidence 99999754
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=96.12 E-value=0.11 Score=41.29 Aligned_cols=54 Identities=13% Similarity=0.087 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC----cccceeeEeccCCC
Q psy4974 161 IEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP----HMVHKLVIWGTKSF 214 (345)
Q Consensus 161 ~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~~~ 214 (345)
..++...+......-...+++|+|+|.|+.++-.++...| ++|.++++++-+..
T Consensus 80 ~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~~ 137 (197)
T 3qpa_A 80 IREMLGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYTKN 137 (197)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTTT
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCCcc
Confidence 3444555555555556679999999999999988777665 57899999986544
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=95.47 E-value=0.02 Score=49.14 Aligned_cols=33 Identities=12% Similarity=0.277 Sum_probs=24.5
Q ss_pred HHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC
Q psy4974 167 IAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 167 ~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
.+.++++.....++.+.|||+||.+|..+|...
T Consensus 143 ~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 143 KLDSVIEQYPDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCceEEEeccChHHHHHHHHHHHH
Confidence 344444444556899999999999999888753
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=95.36 E-value=0.018 Score=49.81 Aligned_cols=23 Identities=22% Similarity=0.222 Sum_probs=19.5
Q ss_pred CCccEEEEEeChhHHHHHHHHHh
Q psy4974 176 GVCKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 176 ~~~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
...++++.|||+||.+|..+|..
T Consensus 134 p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 134 PSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp TTCEEEEEEETHHHHHHHHHHHH
T ss_pred CCCceEEeecCHHHHHHHHHHHH
Confidence 34589999999999999987765
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=95.32 E-value=0.23 Score=39.51 Aligned_cols=54 Identities=11% Similarity=0.038 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC----cccceeeEeccCCC
Q psy4974 161 IEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP----HMVHKLVIWGTKSF 214 (345)
Q Consensus 161 ~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~~~ 214 (345)
..++...+.....+-...+++|+|+|.|+.++-.++...| ++|.++++++-+..
T Consensus 88 ~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~~ 145 (201)
T 3dcn_A 88 INEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYTKN 145 (201)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCTTT
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCccc
Confidence 4444555555555556679999999999999988776655 57889999886544
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=95.03 E-value=0.34 Score=38.08 Aligned_cols=47 Identities=9% Similarity=0.064 Sum_probs=35.4
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC----cccceeeEeccCCC
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP----HMVHKLVIWGTKSF 214 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~~~ 214 (345)
+......-...+++|+|+|.|+.++-.++...| ++|.++++++-+..
T Consensus 83 i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~~ 133 (187)
T 3qpd_A 83 FEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQDKIKGVVLFGYTRN 133 (187)
T ss_dssp HHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEESCTTT
T ss_pred HHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhhhhEEEEEEeeCCcc
Confidence 334445555679999999999999988776655 57899999886543
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=94.75 E-value=0.3 Score=41.66 Aligned_cols=43 Identities=7% Similarity=0.037 Sum_probs=32.0
Q ss_pred HHHhCCccEEEEEeChhHHHHHHHHHh--------CCcccceeeEeccCCC
Q psy4974 172 LKLLGVCKVSLFGWCDGGHLSFVFSMK--------YPHMVHKLVIWGTKSF 214 (345)
Q Consensus 172 l~~~~~~~i~lvGhS~Gg~ia~~~a~~--------~p~~v~~lvl~~~~~~ 214 (345)
..+-...+++|+|+|.|+.++-.++.. .+++|.++++++-+..
T Consensus 127 ~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~~~~V~aVvLfGdP~r 177 (302)
T 3aja_A 127 NDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDEDLVLGVTLIADGRR 177 (302)
T ss_dssp HHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSCGGGEEEEEEESCTTC
T ss_pred HhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCChHHEEEEEEEeCCCC
Confidence 333345699999999999998877642 2478999999986543
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=93.69 E-value=0.17 Score=40.73 Aligned_cols=45 Identities=22% Similarity=0.352 Sum_probs=31.8
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHH--------------hCC----cccceeeEeccCCC
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSM--------------KYP----HMVHKLVIWGTKSF 214 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~--------------~~p----~~v~~lvl~~~~~~ 214 (345)
+...+-...+++|+|+|.|+.++-.+.. ..| ++|.++++++-+..
T Consensus 74 ~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~~ 136 (207)
T 1g66_A 74 SFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPMF 136 (207)
T ss_dssp HHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTTC
T ss_pred HHHHhCCCCcEEEEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcCCCc
Confidence 3333334569999999999999988764 122 46888888876543
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=93.24 E-value=0.22 Score=40.07 Aligned_cols=45 Identities=11% Similarity=0.109 Sum_probs=31.7
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHH--------------hCC----cccceeeEeccCCC
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSM--------------KYP----HMVHKLVIWGTKSF 214 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~--------------~~p----~~v~~lvl~~~~~~ 214 (345)
+...+-...+++|+|+|.|+.++-.++. ..| ++|.++++++-+..
T Consensus 74 ~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~~ 136 (207)
T 1qoz_A 74 NFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPRN 136 (207)
T ss_dssp HHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTTC
T ss_pred HHHhhCCCCcEEEEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCCcc
Confidence 3333334569999999999999988764 122 46888888876543
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=92.56 E-value=0.19 Score=40.28 Aligned_cols=49 Identities=14% Similarity=0.117 Sum_probs=34.4
Q ss_pred HHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC--C----cccceeeEeccCC
Q psy4974 165 VDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY--P----HMVHKLVIWGTKS 213 (345)
Q Consensus 165 ~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~--p----~~v~~lvl~~~~~ 213 (345)
.+.+.....+-...+++|+|+|.|+.++-.++... | ++|.++++++-+.
T Consensus 64 ~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP~ 118 (205)
T 2czq_A 64 IRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNPD 118 (205)
T ss_dssp HHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCTT
T ss_pred HHHHHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCCC
Confidence 33333333444456999999999999988876544 3 4799999998543
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=91.16 E-value=0.16 Score=44.32 Aligned_cols=21 Identities=29% Similarity=0.495 Sum_probs=18.7
Q ss_pred ccEEEEEeChhHHHHHHHHHh
Q psy4974 178 CKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 178 ~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
.++++.|||+||.+|..+|..
T Consensus 166 ~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 166 AKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp EEEEEEEETHHHHHHHHHHHH
T ss_pred ceEEEecCChHHHHHHHHHHH
Confidence 589999999999999988865
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=89.16 E-value=0.065 Score=47.82 Aligned_cols=35 Identities=14% Similarity=0.150 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhC
Q psy4974 165 VDIAYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 165 ~~~~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
.+.+..+++.... .++++.|||+||.+|..+|...
T Consensus 213 l~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 213 LREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 4445555554432 3799999999999999888653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 345 | ||||
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 1e-12 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 1e-10 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 2e-10 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 6e-09 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 4e-08 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 8e-08 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 5e-07 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 9e-07 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 2e-06 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 1e-05 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 2e-05 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 2e-05 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 4e-05 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 5e-05 | |
| d2h7xa1 | 283 | c.69.1.22 (A:9-291) Picromycin polyketide synthase | 1e-04 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 2e-04 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 3e-04 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 3e-04 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 5e-04 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 5e-04 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 6e-04 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 7e-04 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 0.001 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 0.001 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 0.002 |
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 65.2 bits (157), Expect = 1e-12
Identities = 44/281 (15%), Positives = 87/281 (30%), Gaps = 30/281 (10%)
Query: 72 FTEGFFSIKGCDIRFIKYGSGAQVLFF-TYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPP 130
+ E F + G + R+++ G G V+ G E +++ + + + I D
Sbjct: 2 YVERFVNAGGVETRYLEAGKGQPVILIHGGGAGAESEGNWRNVIPIL-ARHYRVIAMDML 60
Query: 131 GNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGH 190
G + + + + + + KVS+ G GG
Sbjct: 61 GFG----------------KTAKPDIEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGA 104
Query: 191 LSFVFSMKYPHMVHKLVIWGTKSFLT------------IDNVRVFEGMRRLSNWSPMARS 238
S+ + +V+ LV+ G+ + + +
Sbjct: 105 TGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHLVKALTNDGFKID 164
Query: 239 EVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVST 298
+ + YV + I + G E + V VP LV DD +V
Sbjct: 165 DAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPV 224
Query: 299 QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ L+ + Y GH I+H + F + +F+
Sbjct: 225 ETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLSFL 265
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 59.5 bits (142), Expect = 1e-10
Identities = 32/283 (11%), Positives = 63/283 (22%), Gaps = 17/283 (6%)
Query: 72 FTEGFFSIKGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPP 130
F + + G + ++ G + F +G ++ + P I D
Sbjct: 7 FDPHYVEVLGERMHYVDVGPRDGTPVLFLHG-NPTSSYLWRNIIPHVAPS-HRCIAPDLI 64
Query: 131 GNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDV---------DIAYELLKLLGVCKVS 181
G E + + V ++
Sbjct: 65 GMGKSDKPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIA 124
Query: 182 LFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVL 241
+ + L ID EG+ P+ E+
Sbjct: 125 CMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMD 184
Query: 242 KAYDN-----DVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMV 296
+ D + N+ Y L VP L+F V++
Sbjct: 185 HYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLI 244
Query: 297 STQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ L L C+ G H + + ++
Sbjct: 245 PPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWL 287
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 58.7 bits (140), Expect = 2e-10
Identities = 34/267 (12%), Positives = 78/267 (29%), Gaps = 7/267 (2%)
Query: 78 SIKGCDIRFIKYGSGAQVLFF-TYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLY 136
+I + + G+G V+ G +++ + + F + I D PG
Sbjct: 16 GFSDFNIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSD 75
Query: 137 LLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFS 196
+ + + + I+ + + + + G +
Sbjct: 76 AVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPG 135
Query: 197 MKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRL----SNWSPMARSEVLKAYDNDVNYIT 252
P M + + G K + +E ++++ + E+L+ +
Sbjct: 136 GLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQP 195
Query: 253 GIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQ 312
++ S L + + DD V LL + +
Sbjct: 196 EHLKNFLISAQKAPLSTWD--VTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDAR 253
Query: 313 YYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ FS GH +H FN + +F+
Sbjct: 254 LHVFSKCGHWAQWEHADEFNRLVIDFL 280
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 54.1 bits (128), Expect = 6e-09
Identities = 38/281 (13%), Positives = 78/281 (27%), Gaps = 32/281 (11%)
Query: 76 FFSIKGCDIRFIKYGSGAQVLFF-TYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVV 134
G + G G V+ G +++ + A + I D G
Sbjct: 7 SILAAGVLTNYHDVGEGQPVILIHGSGPGVSAYANWRLTIPALSKF-YRVIAPDMVGFGF 65
Query: 135 LYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFV 194
+ + IE K + G GG L+
Sbjct: 66 TDRPENYNYSKDSWVDHIIGIMDALEIE----------------KAHIVGNAFGGGLAIA 109
Query: 195 FSMKYPHMVHKLVIWGT------------KSFLTIDNVRVFEGMRRLSNWSPMARSEVLK 242
+++Y V ++V+ G + ++ + + + ++ L
Sbjct: 110 TALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELA 169
Query: 243 AYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQ--ELLPYVDVPVLVFHSADDVMVSTQQ 300
+ + G + M + + + E + + L+ H +D +V
Sbjct: 170 RLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSS 229
Query: 301 VQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341
L + Q + F GH I+ FN + F E
Sbjct: 230 SLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 51.8 bits (122), Expect = 4e-08
Identities = 34/294 (11%), Positives = 82/294 (27%), Gaps = 31/294 (10%)
Query: 72 FTEGFFSIKGCDIRFIKYGS--GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDP 129
E + + G I + + L +G G + + L + T +F+D
Sbjct: 2 CIENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHD-YLLSLRDMTKEGITVLFYDQ 60
Query: 130 PGNVVLYLLGKTCSGYGQSLPK----------------GRSFVPFQYIEEDVDIAYELLK 173
G ++ + + S + LK
Sbjct: 61 FGCGRSEEPDQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLK 120
Query: 174 LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWG------TKSFLTIDNVRVFEGMR 227
L V ++ + + +G + N + +
Sbjct: 121 GLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLL 180
Query: 228 RLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLV 287
R +W P + A +V I N++ + + + + +P L+
Sbjct: 181 RSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDI-----TDKISAIKIPTLI 235
Query: 288 FHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341
D + + + ++ + + F H + + +N++ +FIL+
Sbjct: 236 TVGEYDEVTP-NVARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSDFILK 288
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 50.7 bits (119), Expect = 8e-08
Identities = 34/269 (12%), Positives = 77/269 (28%), Gaps = 7/269 (2%)
Query: 76 FFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVL 135
F + G I F +GSG VLF +G + ++ Q+ + + +I +D G
Sbjct: 3 FVAKDGTQIYFKDWGSGKPVLFS-HG-WLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRS 60
Query: 136 YLLGKTCSGYGQSLPKGRSFV----PFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHL 191
+ + + ++ + + +
Sbjct: 61 DQPWTGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGA 120
Query: 192 SFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYI 251
+ P + + F T + + + + + +
Sbjct: 121 VTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTL 180
Query: 252 TGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL-KF 310
+ ++ ++ + +DVP LV H D +V + + +L K
Sbjct: 181 QIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKG 240
Query: 311 CQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ + H + H Q NE F+
Sbjct: 241 AELKVYKDAPHGFAVTHAQQLNEDLLAFL 269
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.7 bits (114), Expect = 5e-07
Identities = 40/323 (12%), Positives = 94/323 (29%), Gaps = 72/323 (22%)
Query: 72 FTEGFFSIK-GCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPP 130
+ G+ ++K + F++ GSG + +G E S++ Q+ A +
Sbjct: 11 MSHGYVTVKPRVRLHFVELGSG-PAVCLCHG-FPESWYSWRYQIPALAQAGYR------- 61
Query: 131 GNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGH 190
V+ + + G+ + G GG
Sbjct: 62 --VLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKL------GLSQAVFIGHDWGGM 113
Query: 191 LSFVFSMKYPHMVHKLVIWGT---------------------------------KSFLTI 217
L + ++ YP V + T ++ L
Sbjct: 114 LVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQ 173
Query: 218 DNVRVFEGMRRLSNWSPMARSEVLKAY-----------------DNDVNYITGIFNQ--- 257
+ R F+ + R S+ S ++ +V +A + ++ + F +
Sbjct: 174 NLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGF 233
Query: 258 -YVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQF 316
+ + + L + +P L+ + D ++ Q Q + + + +
Sbjct: 234 RGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHI 293
Query: 317 SSGGHSCHIKHGQVFNEISRNFI 339
GH + N+I ++
Sbjct: 294 EDCGHWTQMDKPTEVNQILIKWL 316
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 47.6 bits (112), Expect = 9e-07
Identities = 20/194 (10%), Positives = 55/194 (28%), Gaps = 18/194 (9%)
Query: 144 GYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH-- 201
+ + + Y L+ G + L +++
Sbjct: 69 HHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLELSF 128
Query: 202 MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDM 261
++ + + + L + L + L + + G D
Sbjct: 129 LITAVGVVNLRDTL----------EKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDC 178
Query: 262 VNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK--FCQYYQFSSG 319
+ + + + + VP++ F + +D V ++V +L ++ C+ Y
Sbjct: 179 FEHHWDTLDSTL--DKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGS 236
Query: 320 GH--SCHIKHGQVF 331
H ++ + F
Sbjct: 237 SHDLGENLVVLRNF 250
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 46.4 bits (108), Expect = 2e-06
Identities = 39/259 (15%), Positives = 74/259 (28%), Gaps = 10/259 (3%)
Query: 83 DIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTC 142
+I + G G L +G G ++ FT D PG G++
Sbjct: 1 NIWWQTKGQGNVHLVLLHG-WGLNAEVWRCIDEEL-SSHFTLHLVDLPGF------GRSR 52
Query: 143 SGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPH- 201
SL V Q ++ + + + L L+ ++ S +
Sbjct: 53 GFGALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSAR 112
Query: 202 -MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVD 260
+ F + + R M + + + VD
Sbjct: 113 DEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVD 172
Query: 261 MVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGG 320
++N + ++ L V +P L + D +V + V L + Y F+
Sbjct: 173 VLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAA 232
Query: 321 HSCHIKHGQVFNEISRNFI 339
H+ I H F +
Sbjct: 233 HAPFISHPAEFCHLLVALK 251
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 44.1 bits (102), Expect = 1e-05
Identities = 42/283 (14%), Positives = 80/283 (28%), Gaps = 42/283 (14%)
Query: 81 GCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGK 140
G +I + +G G V+F +G ++++ QL A + I D G+
Sbjct: 8 GVEIFYKDWGQGRPVVFI-HG-WPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHST---- 61
Query: 141 TCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP 200
+ + + D+ L L + GG L+
Sbjct: 62 ------------PVWDGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGT 109
Query: 201 HMVHKLVIWGTKSFLTIDNVRVFEGMRR---------------------LSNWSPMARSE 239
+ V+ + I + + +G+ + R
Sbjct: 110 GRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPG 169
Query: 240 VLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ 299
N + Q ++ ++G + E L D+P LV H DD +V
Sbjct: 170 NKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPID 229
Query: 300 QVQSLLNQL-KFCQYYQFSSGGHSCHIKHGQ--VFNEISRNFI 339
Q+ + + H + G FN F+
Sbjct: 230 ATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFL 272
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 43.4 bits (100), Expect = 2e-05
Identities = 45/288 (15%), Positives = 87/288 (30%), Gaps = 43/288 (14%)
Query: 76 FFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVL 135
F + G I + +GSG ++F +G +S++ Q+ + + I D
Sbjct: 3 FTTRDGTQIYYKDWGSGQPIVFS-HG-WPLNADSWESQMIFLAAQGYRVIAHD------- 53
Query: 136 YLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVF 195
G+G+S Y ++ +L++ L + LFG+ GG +
Sbjct: 54 ------RRGHGRSSQPWSGNDMDTYADDL----AQLIEHLDLRDAVLFGFSTGGGEVARY 103
Query: 196 SMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIF 255
++ + + G + + + ++ + + +G F
Sbjct: 104 IGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPF 163
Query: 256 NQYVDM-----------------------VNLIFKSYGRNVYQELLPYVDVPVLVFHSAD 292
+ K++ + E L +DVP LV H
Sbjct: 164 FGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDA 223
Query: 293 DVMVSTQQVQSLLNQL-KFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
D +V + L K +S H H N FI
Sbjct: 224 DQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFI 271
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 43.4 bits (100), Expect = 2e-05
Identities = 27/288 (9%), Positives = 63/288 (21%), Gaps = 23/288 (7%)
Query: 72 FTEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPG 131
F + I +++ G+G L +G + K + + I D G
Sbjct: 8 FKHYEVQLPDVKIHYVREGAG-PTLLLLHG-WPGFWWEWSKVIGPLAEH-YDVIVPDLRG 64
Query: 132 N-------------------VVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172
G ++ G F + + ++
Sbjct: 65 FGDSEKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVI 124
Query: 173 KLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNW 232
K + L V Y + + F+ ++
Sbjct: 125 KAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSY 184
Query: 233 SPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSAD 292
+E D + + + D+PV +
Sbjct: 185 RDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLG 244
Query: 293 DVMVSTQQVQSLLNQL-KFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
D V + + + GH ++ ++ + +
Sbjct: 245 DTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAF 292
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 42.6 bits (98), Expect = 4e-05
Identities = 32/276 (11%), Positives = 76/276 (27%), Gaps = 13/276 (4%)
Query: 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
T G + D+ + +G+G V+ +G +S+++Q A + I +D G
Sbjct: 4 TVGQENSTSIDLYYEDHGTGQPVVLI-HG-FPLSGHSWERQSAALLDAGYRVITYDRRGF 61
Query: 133 VVLYLLGKTC--------SGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFG 184
+ V + ++A + +
Sbjct: 62 GQSSQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAF 121
Query: 185 WCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAY 244
+ G + + D + G ++ + + +
Sbjct: 122 LASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFN--DFYNLDENLGTRIS 179
Query: 245 DNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSL 304
+ V + ++ +P +DVP L+ H D + + +
Sbjct: 180 EEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARV 239
Query: 305 LNQ-LKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
++ L +Y + H H + N F+
Sbjct: 240 FHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFL 275
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 42.2 bits (97), Expect = 5e-05
Identities = 27/294 (9%), Positives = 58/294 (19%), Gaps = 28/294 (9%)
Query: 73 TEGFFSIKGCDIRFIKYG-SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPG 131
+E ++ +G L G + I +D
Sbjct: 1 SERIVPSGDVELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRD 60
Query: 132 NVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHL 191
+ V L + +
Sbjct: 61 TGRSTT-RDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLS 119
Query: 192 SFVF----------------------SMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRL 229
S ++ + + R E +R+
Sbjct: 120 SLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRV 179
Query: 230 SNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSY----GRNVYQELLPYVDVPV 285
S W ++ + V + + ++ + Y L V VP
Sbjct: 180 SKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPT 239
Query: 286 LVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
LV + D + + L + + + GH+ E+
Sbjct: 240 LVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALPSSVHGPLAEVILAHT 293
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Score = 41.0 bits (95), Expect = 1e-04
Identities = 20/185 (10%), Positives = 47/185 (25%), Gaps = 17/185 (9%)
Query: 157 PFQYIEEDVD-IAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215
++ +D A +L+ G V L G G L+ + + +
Sbjct: 110 LPADLDTALDAQARAILRAAGDAPVVLLGHSGGALLAHELAFRLERAHGAPPAG-----I 164
Query: 216 TIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQ 275
+ + + WS + ++ D L Y R +
Sbjct: 165 VLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMS----------DARLLAMGRYARFLAG 214
Query: 276 ELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF-CQYYQFSSGGHSCHIKHGQVFNEI 334
PVL+ +++ + ++ + H E
Sbjct: 215 PRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVPGDHFTMMRDHAPAVAEA 274
Query: 335 SRNFI 339
+++
Sbjct: 275 VLSWL 279
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 40.3 bits (92), Expect = 2e-04
Identities = 30/279 (10%), Positives = 68/279 (24%), Gaps = 16/279 (5%)
Query: 75 GFFSIKGCDIRFIK-----YGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDP 129
G+ ++ + I+ GSG V+ +G +S+++Q + + I +D
Sbjct: 1 GYITVGNENSTPIELYYEDQGSGQPVVLI-HG-YPLDGHSWERQTRELLAQGYRVITYDR 58
Query: 130 PG--------NVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVS 181
G Y R V + ++A + +
Sbjct: 59 RGFGGSSKVNTGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAK 118
Query: 182 LFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVL 241
L + ++ + + + N S +
Sbjct: 119 LAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRIS 178
Query: 242 KAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQV 301
+ + + E + P L+ H D ++
Sbjct: 179 EQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDAT 238
Query: 302 QSLLNQ-LKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+Q + Y + H H N + F+
Sbjct: 239 ARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTFL 277
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 39.9 bits (91), Expect = 3e-04
Identities = 15/152 (9%), Positives = 40/152 (26%), Gaps = 2/152 (1%)
Query: 185 WCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAY 244
LS + + ++ T + + + S ++
Sbjct: 157 EKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASF 216
Query: 245 DNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSL 304
D + + +L F + + + +P ++ H D+ Q L
Sbjct: 217 GEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDL 276
Query: 305 LNQLKFCQYYQFSSGGHSCHIKHGQVFNEISR 336
+ + GHS + +++
Sbjct: 277 AKAWPEAELHIVEGAGHSYD--EPGILHQLMI 306
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 39.5 bits (90), Expect = 3e-04
Identities = 35/270 (12%), Positives = 76/270 (28%), Gaps = 19/270 (7%)
Query: 78 SIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPG------ 131
S+ + F K + ++ +G+LG + ++ L+ ++ D PG
Sbjct: 1 SLLSNQLHFAKPTARTPLVVLVHGLLGSGAD-WQPVLSHLARTQCAALTLDLPGHGTNPE 59
Query: 132 NVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVD--IAYELLKLLGVCKVSLFGWCDGG 189
S VP + + + L +++L G G
Sbjct: 60 RHCDNFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEG 119
Query: 190 HLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVN 249
+ + + + F V + + +S + + +
Sbjct: 120 GHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNH----EQRQTLIA 175
Query: 250 YITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK 309
+ V + L + L + +P+ D L +
Sbjct: 176 QRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQQ------LAESS 229
Query: 310 FCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
Y Q + GH+ H + Q F +I + I
Sbjct: 230 GLSYSQVAQAGHNVHHEQPQAFAKIVQAMI 259
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 39.2 bits (90), Expect = 5e-04
Identities = 13/106 (12%), Positives = 30/106 (28%), Gaps = 3/106 (2%)
Query: 232 WSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSA 291
W + + ++ + + +++L + P + H
Sbjct: 232 WGGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGV 291
Query: 292 DDVMVSTQQVQSLLNQLKF--CQYYQFSSGGHSCHIKHGQVFNEIS 335
D V V ++L + G H CH + E++
Sbjct: 292 HDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCCHNLGIRPRLEMA 336
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 38.7 bits (88), Expect = 5e-04
Identities = 24/162 (14%), Positives = 43/162 (26%), Gaps = 2/162 (1%)
Query: 178 CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMAR 237
F P + +L+ + LT + + N+ M
Sbjct: 120 EAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEE 179
Query: 238 SEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVS 297
++K+ N Q V ++ + L + VLVFH D +V
Sbjct: 180 --IVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVP 237
Query: 298 TQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
L LK + GH ++ +
Sbjct: 238 LDTSLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLMEHF 279
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 39.1 bits (90), Expect = 6e-04
Identities = 16/115 (13%), Positives = 29/115 (25%), Gaps = 19/115 (16%)
Query: 97 FFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV 156
+ + + + + G
Sbjct: 17 LAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGF-------------------QSDDG 57
Query: 157 PFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGT 211
P E+ + ++L G KV+L G GG S + P +V + GT
Sbjct: 58 PNGRGEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGT 112
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 38.9 bits (89), Expect = 7e-04
Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 7/131 (5%)
Query: 218 DNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQEL 277
N+ + LS+ + + + V + V + +
Sbjct: 249 MNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYN 308
Query: 278 LPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-FCQYYQFSSGGHSCHI----KHGQVFN 332
L + VP+ V++ +D++ V LL++L + + H I V+N
Sbjct: 309 LTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYN 368
Query: 333 EISRNFILEEN 343
EI ++ +
Sbjct: 369 EIVS--MMGTD 377
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 38.0 bits (86), Expect = 0.001
Identities = 36/275 (13%), Positives = 73/275 (26%), Gaps = 12/275 (4%)
Query: 75 GFFSIK-GCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGN 132
G + G +I + +G + F +G + + Q+ F + I D G+
Sbjct: 1 GTVTTSDGTNIFYKDWGPRDGLPVVFHHG-WPLSADDWDNQMLFFLSHGYRVIAHDRRGH 59
Query: 133 VVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI-------AYELLKLLGVCKVSLFGW 185
+ + +V+
Sbjct: 60 GRSDQPSTGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVL 119
Query: 186 CDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYD 245
V S P + V ++ L + + + + + +
Sbjct: 120 VSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGL 179
Query: 246 NDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLL 305
D ++ G+ ++ + + L +DVPVLV H DD +V
Sbjct: 180 IDHWWLQGMMGAANAHYE-CIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKS 238
Query: 306 NQL-KFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+L + H H +V N F+
Sbjct: 239 AELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFV 273
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 37.9 bits (86), Expect = 0.001
Identities = 34/283 (12%), Positives = 63/283 (22%), Gaps = 24/283 (8%)
Query: 76 FFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVL 135
F IKG + +I G+G + F +G ++ + L I D G
Sbjct: 12 FIEIKGRRMAYIDEGTG-DPILFQHG-NPTSSYLWRNIMPHC-AGLGRLIACDLIGMGDS 68
Query: 136 YLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA--------------YELLKLLGVCKVS 181
L + + D + V ++
Sbjct: 69 DKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIA 128
Query: 182 LFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPM-----A 236
F + + + + DNV V + + L A
Sbjct: 129 YMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAA 188
Query: 237 RSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMV 296
E A Q Y L +P L ++ +
Sbjct: 189 YREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPG-AL 247
Query: 297 STQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+T +++ + G H F+
Sbjct: 248 TTGRMRDFCRTWPNQTEITVA-GAHFIQEDSPDEIGAAIAAFV 289
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 37.2 bits (84), Expect = 0.002
Identities = 29/300 (9%), Positives = 75/300 (25%), Gaps = 18/300 (6%)
Query: 57 DTQLPSRTDFIHQDVFTEGFFSIKGCDIRFIKYGS--GAQVLFFTYGVLGEIRNSFKKQL 114
D + + + + + G ++ G+ V +G ++K +
Sbjct: 9 DQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHG-EPTWSYLYRKMI 67
Query: 115 TAFDPKLFTSIFWDPPGNV------------VLYLLGKTCSGYGQSLPKGRSFVPFQYIE 162
F I D G + + + + + V +
Sbjct: 68 PVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGG 127
Query: 163 EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRV 222
+ + ++ + +T ++R+
Sbjct: 128 FLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRL 187
Query: 223 FEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQY--VDMVNLIFKSYGRNVYQELLPY 280
+ M+R + A + A D +Y G+ V +
Sbjct: 188 DQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQND 247
Query: 281 VDVPVLVFHSADDVMVSTQQVQSLLNQLKFC-QYYQFSSGGHSCHIKHGQVFNEISRNFI 339
+ + D ++ + + + C + + + GH QV E ++F
Sbjct: 248 WNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFA 307
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 345 | |||
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.98 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.97 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.97 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.97 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.97 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.96 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.96 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.95 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.95 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.94 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.93 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.92 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.91 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.9 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.9 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.9 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.9 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.89 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.88 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.87 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.87 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.87 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.85 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.83 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.82 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.81 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.81 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.8 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.79 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.77 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.77 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.77 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.76 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.76 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.75 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.74 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.73 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.73 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.67 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.66 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.65 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.64 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.58 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.51 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.51 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.49 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.48 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.37 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.37 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.35 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.35 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.26 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.26 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.21 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.17 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.08 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.99 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.95 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.95 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.92 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.88 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.83 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.81 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.8 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.77 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.67 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.66 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.6 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.45 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.16 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 97.25 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 97.2 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 97.16 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 97.07 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 97.04 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 96.99 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 96.89 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 96.77 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 96.43 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 96.32 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 95.98 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 95.88 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 95.78 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 95.62 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 95.58 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 95.36 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 89.96 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 89.2 |
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=4.7e-35 Score=253.67 Aligned_cols=254 Identities=12% Similarity=0.070 Sum_probs=182.7
Q ss_pred eeeEEEcCceEEEEEcCC-CCceEEEEcCcCCCchhhH-HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSF-KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
+..+.++|.+|+|.+.|+ +.|+|||+||++++. ..| ..+++.|.++||+|+++|+|| ||.|+.+
T Consensus 2 e~~~~~g~~~i~y~~~G~~~~p~vvl~HG~~~~~-~~~~~~~~~~l~~~g~~vi~~D~~G-------------~G~S~~~ 67 (297)
T d1q0ra_ 2 ERIVPSGDVELWSDDFGDPADPALLLVMGGNLSA-LGWPDEFARRLADGGLHVIRYDHRD-------------TGRSTTR 67 (297)
T ss_dssp EEEEEETTEEEEEEEESCTTSCEEEEECCTTCCG-GGSCHHHHHHHHTTTCEEEEECCTT-------------STTSCCC
T ss_pred CeEEEECCEEEEEEEecCCCCCEEEEECCCCcCh-hHHHHHHHHHHHhCCCEEEEEeCCC-------------Ccccccc
Confidence 677889999999999996 458999999999985 787 557788888899999999999 9999755
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccC
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSN 231 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 231 (345)
.... ...+++++++++..++++++.++++++||||||.+++.+|..+|++|+++|++++....................
T Consensus 68 ~~~~-~~~~~~~~~~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 146 (297)
T d1q0ra_ 68 DFAA-HPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPT 146 (297)
T ss_dssp CTTT-SCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCC
T ss_pred cccc-cccccchhhhhhccccccccccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhh
Confidence 4322 223788999999999999999999999999999999999999999999999999876544333222211111100
Q ss_pred C------ChhhHHHHHHH--------------------cccC-CchhhhhHHHHHHHHHHHHHh------------hCch
Q psy4974 232 W------SPMARSEVLKA--------------------YDND-VNYITGIFNQYVDMVNLIFKS------------YGRN 272 (345)
Q Consensus 232 ~------~~~~~~~~~~~--------------------~~~~-~~~~~~~~~~~~~~~~~~~~~------------~~~~ 272 (345)
. .......+... +... ..........+.......... ....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (297)
T d1q0ra_ 147 LDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPP 226 (297)
T ss_dssp SSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCG
T ss_pred hhhhhhhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhccc
Confidence 0 00000000000 0000 000011111111111110000 0112
Q ss_pred hhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 273 VYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 273 ~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+....+.++++|+++|+|++|.++|++.++.+.+.+|++++++++++||+++.|+|+++++.|.+||++.
T Consensus 227 ~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~ 296 (297)
T d1q0ra_ 227 SRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALPSSVHGPLAEVILAHTRSA 296 (297)
T ss_dssp GGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTTEEEEEETTCCSSCCGGGHHHHHHHHHHHHHHT
T ss_pred cchhhhhccCCceEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCcchhhCHHHHHHHHHHHHHhh
Confidence 3345567899999999999999999999999999999999999999999999999999999999999863
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=1.2e-35 Score=253.48 Aligned_cols=249 Identities=18% Similarity=0.249 Sum_probs=178.9
Q ss_pred eeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCc--hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEI--RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~--~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
.++++++||.+++|.+.|+++ +|||+||++++. ...|..+++.|++ ||+|+++|+|| ||.|+.
T Consensus 3 ~~~~~~~dg~~l~y~~~G~g~-~vvllHG~~~~~~~~~~~~~~~~~l~~-~~~v~~~D~~G-------------~G~S~~ 67 (268)
T d1j1ia_ 3 VERFVNAGGVETRYLEAGKGQ-PVILIHGGGAGAESEGNWRNVIPILAR-HYRVIAMDMLG-------------FGKTAK 67 (268)
T ss_dssp EEEEEEETTEEEEEEEECCSS-EEEEECCCSTTCCHHHHHTTTHHHHTT-TSEEEEECCTT-------------STTSCC
T ss_pred cCeEEEECCEEEEEEEEcCCC-eEEEECCCCCCccHHHHHHHHHHHHhc-CCEEEEEcccc-------------cccccC
Confidence 378899999999999999885 899999998763 2457778888976 59999999999 999987
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCCc-cEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhc
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGVC-KVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRL 229 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 229 (345)
+...+ +++++++++.++++.++.+ +++++|||+||.+++.+|.++|++|+++|++++............. ....
T Consensus 68 ~~~~~----~~~~~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~-~~~~ 142 (268)
T d1j1ia_ 68 PDIEY----TQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRP-IINY 142 (268)
T ss_dssp CSSCC----CHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC-----------C
T ss_pred Ccccc----ccccccccchhhHHHhhhcccceeeeccccccccchhhccChHhhheeeecCCCccccccchhhhh-hhhh
Confidence 66555 6788899999999999875 7899999999999999999999999999999987554332211111 1000
Q ss_pred cCCChhhHHHHHHHcccCCchhhh-------------hHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCC
Q psy4974 230 SNWSPMARSEVLKAYDNDVNYITG-------------IFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMV 296 (345)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v 296 (345)
........................ ....+.................+.+.++++|+++|+|++|.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~ 222 (268)
T d1j1ia_ 143 DFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVV 222 (268)
T ss_dssp CSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSS
T ss_pred hhhhhhhHHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCCC
Confidence 000011111111111111000000 0001111111122222222334557789999999999999999
Q ss_pred ChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 297 STQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
|++..+.+.+.+|++++++++++||++++|+|+++++.|.+||.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 223 PVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp CHHHHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999975
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-35 Score=259.50 Aligned_cols=259 Identities=16% Similarity=0.226 Sum_probs=186.0
Q ss_pred CcceeeeEEE-cCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCC
Q psy4974 70 DVFTEGFFSI-KGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS 148 (345)
Q Consensus 70 ~~~~~~~~~~-~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s 148 (345)
..+...|+++ +|.+|+|.+.|++ |+|||+||+++++ ..|..+++.|+++||+|+++|+|| ||.|
T Consensus 9 ~~~~~~~v~~~~g~~i~y~~~G~g-p~vlllHG~~~~~-~~~~~~~~~L~~~g~~vi~~D~~G-------------~G~S 73 (322)
T d1zd3a2 9 SDMSHGYVTVKPRVRLHFVELGSG-PAVCLCHGFPESW-YSWRYQIPALAQAGYRVLAMDMKG-------------YGES 73 (322)
T ss_dssp GGSEEEEEEEETTEEEEEEEECCS-SEEEEECCTTCCG-GGGTTHHHHHHHTTCEEEEEECTT-------------STTS
T ss_pred CCCceeEEEECCCCEEEEEEEcCC-CeEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEecccc-------------cccc
Confidence 3456788888 7999999999977 6999999999995 999999999998899999999999 9999
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhH-
Q psy4974 149 LPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMR- 227 (345)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~- 227 (345)
..+... ...++++.++++.+++++++.++++++||||||.+++.+|.++|++++++|+++++...............
T Consensus 74 ~~~~~~--~~~~~~~~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 151 (322)
T d1zd3a2 74 SAPPEI--EEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKA 151 (322)
T ss_dssp CCCSCG--GGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHT
T ss_pred cccccc--ccccccccchhhhhhhhcccccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhc
Confidence 766432 23367888999999999999999999999999999999999999999999999875432211110000000
Q ss_pred -------hccCCChh--------hHHHHHHHcccCC--------------------------ch-hhhhHHHHHHHHH--
Q psy4974 228 -------RLSNWSPM--------ARSEVLKAYDNDV--------------------------NY-ITGIFNQYVDMVN-- 263 (345)
Q Consensus 228 -------~~~~~~~~--------~~~~~~~~~~~~~--------------------------~~-~~~~~~~~~~~~~-- 263 (345)
........ ....+...+.... .. .......+...+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (322)
T d1zd3a2 152 NPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKS 231 (322)
T ss_dssp CGGGHHHHHTTSTTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHH
T ss_pred cchhhhHHhhhccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhc
Confidence 00000000 0000111110000 00 0001111111111
Q ss_pred ---HHHHhh------CchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHH
Q psy4974 264 ---LIFKSY------GRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEI 334 (345)
Q Consensus 264 ---~~~~~~------~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 334 (345)
...... ..........++++|+++++|++|.+++++..+.+.+.++++++++++++||++++|+|+++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~ 311 (322)
T d1zd3a2 232 GFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQI 311 (322)
T ss_dssp TTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTTCEEEEETTCCSCHHHHSHHHHHHH
T ss_pred ccccccccccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHH
Confidence 111100 11223455678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccC
Q psy4974 335 SRNFILEENKT 345 (345)
Q Consensus 335 i~~fl~~~~k~ 345 (345)
|.+||+++.|+
T Consensus 312 i~~FL~~~~~~ 322 (322)
T d1zd3a2 312 LIKWLDSDARN 322 (322)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHhhcCCC
Confidence 99999998764
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=7.2e-35 Score=250.61 Aligned_cols=251 Identities=17% Similarity=0.224 Sum_probs=175.0
Q ss_pred eeeEEEcCceEEEEEcCC--CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS--GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~--~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
+.|++++|.+|+|...|+ ++|+||++||+++++ ..|...+..|.++||+|+++|+|| ||.|+.+
T Consensus 4 ~~~~~~~g~~i~y~~~g~~~~~~~iv~lHG~~g~~-~~~~~~~~~~~~~~~~vi~~D~~G-------------~G~S~~~ 69 (290)
T d1mtza_ 4 ENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMS-HDYLLSLRDMTKEGITVLFYDQFG-------------CGRSEEP 69 (290)
T ss_dssp EEEEEETTEEEEEEEECCSSCSEEEEEECCTTTCC-SGGGGGGGGGGGGTEEEEEECCTT-------------STTSCCC
T ss_pred cCeEEECCEEEEEEEcCCCCCCCeEEEECCCCCch-HHHHHHHHHHHHCCCEEEEEeCCC-------------Ccccccc
Confidence 679999999999999985 457899999998885 677777777777789999999999 9999765
Q ss_pred CCCCCCccchHHHHHHHHHHHHHh-CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhH---
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLL-GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMR--- 227 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~-~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--- 227 (345)
.. ...++++.++++.++++++ +.++++++||||||.+|+.+|.++|++|++++++++................
T Consensus 70 ~~---~~~~~~~~~~~l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 146 (290)
T d1mtza_ 70 DQ---SKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELP 146 (290)
T ss_dssp CG---GGCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSC
T ss_pred cc---ccccccchhhhhhhhhcccccccccceecccccchhhhhhhhcChhhheeeeecccccCcccchhhhhhhhhhhh
Confidence 33 2226788899999999987 6889999999999999999999999999999999986543221111100000
Q ss_pred -----------hccCC-ChhhHHHHHHH----cccCCchhhhhHHHHHHHHH-HHHHhh------------CchhhhccC
Q psy4974 228 -----------RLSNW-SPMARSEVLKA----YDNDVNYITGIFNQYVDMVN-LIFKSY------------GRNVYQELL 278 (345)
Q Consensus 228 -----------~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~------------~~~~~~~~l 278 (345)
..... ........... .................... ...... ...+....+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (290)
T d1mtza_ 147 AKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKI 226 (290)
T ss_dssp HHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTG
T ss_pred HHHHHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhhcccHHHHh
Confidence 00011 11111111110 00000011111111100000 001000 111233445
Q ss_pred CCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 279 PYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 279 ~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
.++++|+++++|++|.++| +.++.+.+.++++++++++++||++++|+|+++++.|.+||.++
T Consensus 227 ~~i~~P~l~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~h 289 (290)
T d1mtza_ 227 SAIKIPTLITVGEYDEVTP-NVARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSDFILKH 289 (290)
T ss_dssp GGCCSCEEEEEETTCSSCH-HHHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred hcccceEEEEEeCCCCCCH-HHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHHHh
Confidence 6788999999999998776 66888999999999999999999999999999999999999886
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.5e-34 Score=247.09 Aligned_cols=248 Identities=17% Similarity=0.168 Sum_probs=175.9
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCc--hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEI--RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~--~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
.++++++|.+++|.+.|+| |||||+||++++. ...|..+++.|++ ||+|+++|+|| ||.|+.+
T Consensus 5 ~~~i~~~G~~~~Y~~~G~G-~pvvllHG~~~~~~~~~~~~~~~~~l~~-~~~vi~~Dl~G-------------~G~S~~~ 69 (271)
T d1uk8a_ 5 GKSILAAGVLTNYHDVGEG-QPVILIHGSGPGVSAYANWRLTIPALSK-FYRVIAPDMVG-------------FGFTDRP 69 (271)
T ss_dssp CEEEEETTEEEEEEEECCS-SEEEEECCCSTTCCHHHHHTTTHHHHTT-TSEEEEECCTT-------------STTSCCC
T ss_pred CCEEEECCEEEEEEEEeeC-CeEEEECCCCCCccHHHHHHHHHHHHhC-CCEEEEEeCCC-------------CCCcccc
Confidence 5678999999999999988 4899999998763 2346667888875 69999999999 9999765
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccC
Q psy4974 152 GRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSN 231 (345)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 231 (345)
... ....++.++++..+++.++.++++|+||||||.+|+.+|.++|++++++|++++............ .......
T Consensus 70 ~~~---~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~-~~~~~~~ 145 (271)
T d1uk8a_ 70 ENY---NYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLN-AVWGYTP 145 (271)
T ss_dssp TTC---CCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHH-HHHTCCS
T ss_pred ccc---cccccccchhhhhhhhhhcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhhhh-hhhhccc
Confidence 432 236778899999999999999999999999999999999999999999999998765432221111 1111111
Q ss_pred CChhhHHHHHHHcccCCchhhhhHHH-HHH-----HHHHHHHhh----------CchhhhccCCCCCCCEEEEEeCCCCC
Q psy4974 232 WSPMARSEVLKAYDNDVNYITGIFNQ-YVD-----MVNLIFKSY----------GRNVYQELLPYVDVPVLVFHSADDVM 295 (345)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~----------~~~~~~~~l~~i~~Pvl~i~G~~D~~ 295 (345)
................. ........ ... .....+... ........+.++++|+++|+|++|.+
T Consensus 146 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 224 (271)
T d1uk8a_ 146 SIENMRNLLDIFAYDRS-LVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQV 224 (271)
T ss_dssp CHHHHHHHHHHHCSCGG-GCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSS
T ss_pred hhHHHHHHHHHHhhhcc-cchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccccHHHHHhhccceeEEecCCCCC
Confidence 11111111111111000 00000000 000 000000000 00112344678899999999999999
Q ss_pred CChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 296 VSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 296 v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+|.+..+.+.+.++++++++++++||+++.|+|+++++.|.+||++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 225 VPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp SCHHHHHHHHHHCTTEEEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999986
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=2.6e-34 Score=247.39 Aligned_cols=244 Identities=16% Similarity=0.183 Sum_probs=171.9
Q ss_pred cCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHH---hhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC
Q psy4974 80 KGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLT---AFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV 156 (345)
Q Consensus 80 ~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~---~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~ 156 (345)
++.+|+|.+.|++ |+|||+||++++. ..|..+.+ .+.+.||+|+++|+|| ||.|..+....
T Consensus 18 ~~~~i~y~~~G~G-~~ivllHG~~~~~-~~~~~~~~~l~~~~~~g~~v~~~D~~G-------------~G~S~~~~~~~- 81 (283)
T d2rhwa1 18 SDFNIHYNEAGNG-ETVIMLHGGGPGA-GGWSNYYRNVGPFVDAGYRVILKDSPG-------------FNKSDAVVMDE- 81 (283)
T ss_dssp EEEEEEEEEECCS-SEEEEECCCSTTC-CHHHHHTTTHHHHHHTTCEEEEECCTT-------------STTSCCCCCSS-
T ss_pred CCEEEEEEEEcCC-CeEEEECCCCCCh-hHHHHHHHHHHHHHHCCCEEEEEeCCC-------------Ccccccccccc-
Confidence 3468999999987 5899999999985 88876543 3445689999999999 99997665432
Q ss_pred CccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCch----hHHHHHHhH-hccC
Q psy4974 157 PFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTID----NVRVFEGMR-RLSN 231 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~~-~~~~ 231 (345)
......++++.+++++++.++++++||||||.+|+.+|.++|++|+++|++++....+.. .......+. ....
T Consensus 82 --~~~~~~~~~i~~li~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (283)
T d2rhwa1 82 --QRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAE 159 (283)
T ss_dssp --CHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHS
T ss_pred --cccchhhhhcccccccccccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhh
Confidence 245667899999999999999999999999999999999999999999999986543211 111111111 1111
Q ss_pred CChhhHHH-HHHHcccCCchhhhhHHHHHH-------HHHHH----HH-hhCchhhhccCCCCCCCEEEEEeCCCCCCCh
Q psy4974 232 WSPMARSE-VLKAYDNDVNYITGIFNQYVD-------MVNLI----FK-SYGRNVYQELLPYVDVPVLVFHSADDVMVST 298 (345)
Q Consensus 232 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~----~~-~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~ 298 (345)
........ ..................... ..... .. .....+....+.++++|+++++|++|.++|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~ 239 (283)
T d2rhwa1 160 PSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPL 239 (283)
T ss_dssp CCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCT
T ss_pred hhhhhHHHHHHHhhcccccCcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCH
Confidence 11111111 111111110001111111111 11111 11 1112234566778999999999999999999
Q ss_pred HHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 299 QQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+.++.+.+.++++++++++++||+++.|+|+++++.|.+||++
T Consensus 240 ~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 240 DHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp HHHHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999976
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=1.4e-34 Score=249.64 Aligned_cols=253 Identities=14% Similarity=0.188 Sum_probs=181.8
Q ss_pred CCcceeeeEEEcCceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCC
Q psy4974 69 QDVFTEGFFSIKGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQ 147 (345)
Q Consensus 69 ~~~~~~~~~~~~g~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~ 147 (345)
+.+++.++++++|.+|+|...|+. .|+|||+||++++. ..|..+++.|++ ||+|+++|+|| ||.
T Consensus 4 ~~p~~~~~i~~~g~~i~y~~~G~~~~p~lvllHG~~~~~-~~~~~~~~~L~~-~~~vi~~d~~G-------------~G~ 68 (291)
T d1bn7a_ 4 GFPFDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSS-YLWRNIIPHVAP-SHRCIAPDLIG-------------MGK 68 (291)
T ss_dssp CCCCCCEEEEETTEEEEEEEESCSSSSCEEEECCTTCCG-GGGTTTHHHHTT-TSCEEEECCTT-------------STT
T ss_pred CCCCCCeEEEECCEEEEEEEeCCCCCCeEEEECCCCCCH-HHHHHHHHHHhc-CCEEEEEeCCC-------------Ccc
Confidence 345568999999999999999853 47999999999995 999999999976 69999999999 999
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH--HHHH-
Q psy4974 148 SLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV--RVFE- 224 (345)
Q Consensus 148 s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~- 224 (345)
|+.+...+ +++++++++.+++++++.++++++||||||.+++.+|.++|+++++++++++......... ....
T Consensus 69 S~~~~~~~----~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~ 144 (291)
T d1bn7a_ 69 SDKPDLDY----FFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARE 144 (291)
T ss_dssp SCCCSCCC----CHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHH
T ss_pred cccccccc----chhHHHHHHhhhhhhhccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhh
Confidence 98776655 7788899999999999999999999999999999999999999999999987654322211 0000
Q ss_pred HhHhc----------cCCChhhHHHHHHHcccCCchhhhhHHHHH---------HHHHHHHHhhC-----------chhh
Q psy4974 225 GMRRL----------SNWSPMARSEVLKAYDNDVNYITGIFNQYV---------DMVNLIFKSYG-----------RNVY 274 (345)
Q Consensus 225 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~-----------~~~~ 274 (345)
..... .................. ........+. ........... ....
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (291)
T d1bn7a_ 145 TFQAFRTADVGRELIIDQNAFIEGVLPKCVVRP--LTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAY 222 (291)
T ss_dssp HHHHHTSTTHHHHHHTTSCHHHHTHHHHTCSSC--CCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHH
T ss_pred HHHHHhhhhhHHHhhhhhhhhHHhhhhhhcccc--chHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhh
Confidence 00000 000000000111110000 0000000000 00000000000 0011
Q ss_pred hccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 275 QELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 275 ~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
...+.++++|+++++|++|.++|.+..+.+.+.++++++++++++||+++.|+|+++++.|.+||+..
T Consensus 223 ~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 223 MNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPGL 290 (291)
T ss_dssp HHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCGGGTCHHHHHHHHHHHSGGG
T ss_pred hhhhhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHHhh
Confidence 23345689999999999999999999999999999999999999999999999999999999999863
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=8.6e-34 Score=243.94 Aligned_cols=254 Identities=15% Similarity=0.198 Sum_probs=177.3
Q ss_pred eeeEEEcCceEEEEEcCC-CCceEEEEcCcCCCc--hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGS-GAQVLFFTYGVLGEI--RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~--~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
+..+..++.+++|...|+ ..|+|||+||++++. ...|..+++.|++ ||+|+++|+|| ||.|+.
T Consensus 6 ~~~~~~~~~~~h~~~~G~~~~p~ivllHG~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G-------------~G~S~~ 71 (281)
T d1c4xa_ 6 EKRFPSGTLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAE-NFFVVAPDLIG-------------FGQSEY 71 (281)
T ss_dssp EEEECCTTSCEEEEEESCTTSCEEEEECCCSTTCCHHHHHGGGHHHHHT-TSEEEEECCTT-------------STTSCC
T ss_pred EEEEccCCEEEEEEEEecCCCCEEEEECCCCCCCcHHHHHHHHHHHHhC-CCEEEEEeCCC-------------Cccccc
Confidence 556677889999999996 458999999998753 2457788899987 59999999999 999976
Q ss_pred CCCC-CCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhc
Q psy4974 151 KGRS-FVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRL 229 (345)
Q Consensus 151 ~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 229 (345)
.... .......++.++++.+++++++.++++++||||||.+|+.+|.++|++|+++|++++..............+...
T Consensus 72 ~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 151 (281)
T d1c4xa_ 72 PETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAF 151 (281)
T ss_dssp CSSCCSSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTG
T ss_pred cccccccchhhHHHhhhhccccccccccccceeccccccccccccccccccccccceEEeccccCccccchhHHHHHHHh
Confidence 5432 102334667788999999999999999999999999999999999999999999998655433222222222111
Q ss_pred -cCCChhhHHHHHHHcccCCchhhhh---HHHH--------HHHHH-HHHHhhC-----chhhhccCCCCCCCEEEEEeC
Q psy4974 230 -SNWSPMARSEVLKAYDNDVNYITGI---FNQY--------VDMVN-LIFKSYG-----RNVYQELLPYVDVPVLVFHSA 291 (345)
Q Consensus 230 -~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------~~~~~-~~~~~~~-----~~~~~~~l~~i~~Pvl~i~G~ 291 (345)
..............+.......... .... ..... ..+.... .......+.++++|+|+++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 231 (281)
T d1c4xa_ 152 YADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGR 231 (281)
T ss_dssp GGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEET
T ss_pred hhhcccchhhhhhhhhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeC
Confidence 1111111111111111110011110 0000 00011 1111110 111233467889999999999
Q ss_pred CCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 292 DDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 292 ~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+|.++|.+..+.+.+.++++++++++++||++++|+|+++++.|.+||+.
T Consensus 232 ~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 281 (281)
T d1c4xa_ 232 QDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 281 (281)
T ss_dssp TCSSSCTHHHHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred CCCCcCHHHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999973
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=1e-33 Score=242.00 Aligned_cols=247 Identities=18% Similarity=0.235 Sum_probs=172.6
Q ss_pred eEEE-cCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC
Q psy4974 76 FFSI-KGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS 154 (345)
Q Consensus 76 ~~~~-~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~ 154 (345)
|++. ||.+|+|.+.|+++ +|||+||++++. ..|..+++.|.++||+|+++|+|| ||.|+.+...
T Consensus 2 ~~~t~dG~~l~y~~~G~g~-~ivlvHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G-------------~G~S~~~~~~ 66 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDWGQGR-PVVFIHGWPLNG-DAWQDQLKAVVDAGYRGIAHDRRG-------------HGHSTPVWDG 66 (274)
T ss_dssp EEECTTSCEEEEEEECSSS-EEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTT-------------STTSCCCSSC
T ss_pred eEECcCCCEEEEEEECCCC-eEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEeCCC-------------Cccccccccc
Confidence 4455 89999999999874 899999999995 999999999988899999999999 9999877655
Q ss_pred CCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHh-CCcccceeeEeccCCCCCch--------hHHHHHH
Q psy4974 155 FVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMK-YPHMVHKLVIWGTKSFLTID--------NVRVFEG 225 (345)
Q Consensus 155 ~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~--------~~~~~~~ 225 (345)
+ ++.+.++++.++++.++.++++++||||||.+++.++++ .|++|++++++++....... .......
T Consensus 67 ~----~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (274)
T d1a8qa_ 67 Y----DFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDA 142 (274)
T ss_dssp C----SHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHH
T ss_pred c----cchhhHHHHHHHHHHhhhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHH
Confidence 5 678889999999999999999999999999988886554 58899999999975432211 0111111
Q ss_pred hHhcc--CCChhhHHHHHHHcccCC---chhhhhHHHH--------HHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCC
Q psy4974 226 MRRLS--NWSPMARSEVLKAYDNDV---NYITGIFNQY--------VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSAD 292 (345)
Q Consensus 226 ~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~ 292 (345)
+.... .............+.... .......... ..............+....+.++++|+++|+|++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~ 222 (274)
T d1a8qa_ 143 LKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDD 222 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETT
T ss_pred HHhhhhhhhHHHhhhhhhhhhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHHHHhccceeeeeccCC
Confidence 11000 000001111111221110 0000000000 0111111122222233456788999999999999
Q ss_pred CCCCChHH-HHHHHhhcCCcEEEEeCCCCCcccc--cChHHHHHHHHHHHHh
Q psy4974 293 DVMVSTQQ-VQSLLNQLKFCQYYQFSSGGHSCHI--KHGQVFNEISRNFILE 341 (345)
Q Consensus 293 D~~v~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~i~~fl~~ 341 (345)
|.++|.+. .+.+.+.+|++++++++++||+.++ ++|+++++.|.+||++
T Consensus 223 D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 223 DQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp CSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred CCCcCHHHHHHHHHHhCCCCEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 99999765 5667788899999999999999876 6799999999999974
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=1e-33 Score=242.17 Aligned_cols=243 Identities=16% Similarity=0.195 Sum_probs=169.5
Q ss_pred cCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCcc
Q psy4974 80 KGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQ 159 (345)
Q Consensus 80 ~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~ 159 (345)
++++|+|.+.|+|+ +|||+||++++. ..|..+++.|.++||+|+++|+|| ||.|+.....+
T Consensus 11 ~~v~i~y~~~G~G~-~ivllHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G-------------~G~S~~~~~~~---- 71 (277)
T d1brta_ 11 TSIDLYYEDHGTGQ-PVVLIHGFPLSG-HSWERQSAALLDAGYRVITYDRRG-------------FGQSSQPTTGY---- 71 (277)
T ss_dssp EEEEEEEEEECSSS-EEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTT-------------STTSCCCSSCC----
T ss_pred CcEEEEEEEEccCC-eEEEECCCCCCH-HHHHHHHHHHHhCCCEEEEEeCCC-------------CCccccccccc----
Confidence 46789999999875 899999999995 999999999988899999999999 99998766555
Q ss_pred chHHHHHHHHHHHHHhCCccEEEEEeChhH-HHHHHHHHhCCcccceeeEeccCCCCCchh---------HHHHHHhHhc
Q psy4974 160 YIEEDVDIAYELLKLLGVCKVSLFGWCDGG-HLSFVFSMKYPHMVHKLVIWGTKSFLTIDN---------VRVFEGMRRL 229 (345)
Q Consensus 160 ~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~---------~~~~~~~~~~ 229 (345)
+++++++++.+++++++.++++++|||||| .++..+|..+|++|+++|++++........ ......+...
T Consensus 72 ~~~~~~~dl~~~l~~l~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (277)
T d1brta_ 72 DYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAA 151 (277)
T ss_dssp SHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHH
T ss_pred chhhhhhhhhhhhhccCcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHh
Confidence 788889999999999999999999999996 567777888899999999998754322110 1111111100
Q ss_pred cC-CChh-hHHHHHHHcccCCc----hhhhhHHHHHH-H----HHHHHHh--hCchhhhccCCCCCCCEEEEEeCCCCCC
Q psy4974 230 SN-WSPM-ARSEVLKAYDNDVN----YITGIFNQYVD-M----VNLIFKS--YGRNVYQELLPYVDVPVLVFHSADDVMV 296 (345)
Q Consensus 230 ~~-~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~-~----~~~~~~~--~~~~~~~~~l~~i~~Pvl~i~G~~D~~v 296 (345)
.. .... ........+..... ........... . ....... ....+....+.++++|+++++|++|.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~ 231 (277)
T d1brta_ 152 VKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTL 231 (277)
T ss_dssp HHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSS
T ss_pred hhccchhhhhhccccccccchhhhhhhhHHHhhhhhcccchhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCc
Confidence 00 0000 00111111110000 00001111100 0 0001111 1112334556778999999999999999
Q ss_pred ChHH-HHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 297 STQQ-VQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 297 ~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+.+. .+.+.+.++++++++++++||++++|+|+++++.|.+||++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 232 PIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp CGGGTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 8765 56677888999999999999999999999999999999975
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=1.8e-33 Score=242.74 Aligned_cols=252 Identities=14% Similarity=0.106 Sum_probs=173.6
Q ss_pred eeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
+...++++|.+|+|.+.|++ |+|||+||+++++ ..|..+++.|++. |+|+++|+|| ||.|+...
T Consensus 9 ~~~~~~~~~~~l~y~~~G~g-p~vv~lHG~~~~~-~~~~~~~~~l~~~-~~vi~~D~~G-------------~G~s~~~~ 72 (293)
T d1ehya_ 9 KHYEVQLPDVKIHYVREGAG-PTLLLLHGWPGFW-WEWSKVIGPLAEH-YDVIVPDLRG-------------FGDSEKPD 72 (293)
T ss_dssp CEEEEECSSCEEEEEEEECS-SEEEEECCSSCCG-GGGHHHHHHHHTT-SEEEEECCTT-------------STTSCCCC
T ss_pred cceEEEECCEEEEEEEECCC-CeEEEECCCCCCH-HHHHHHHHHHhcC-CEEEEecCCc-------------ccCCcccc
Confidence 46778889999999999987 5899999999995 9999999999874 9999999999 99997655
Q ss_pred CCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHH--------HH
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRV--------FE 224 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--------~~ 224 (345)
.......+++++++++.+++++++.++++++||||||.+|+.+|.++|+++.++|++++........... ..
T Consensus 73 ~~~~~~~~~~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 152 (293)
T d1ehya_ 73 LNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYS 152 (293)
T ss_dssp TTCGGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHH
T ss_pred ccccccccchhhhhHHHhhhhhcCccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhh
Confidence 4321344678899999999999999999999999999999999999999999999999864321111000 00
Q ss_pred Hh------HhccCCCh-hhHHHHHHHccc---CCchh-hhhHHHHH---------HHHHHHHHhhCchh----hhccCCC
Q psy4974 225 GM------RRLSNWSP-MARSEVLKAYDN---DVNYI-TGIFNQYV---------DMVNLIFKSYGRNV----YQELLPY 280 (345)
Q Consensus 225 ~~------~~~~~~~~-~~~~~~~~~~~~---~~~~~-~~~~~~~~---------~~~~~~~~~~~~~~----~~~~l~~ 280 (345)
.. ........ .....+...+.. ..... ........ ......+....... .......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (293)
T d1ehya_ 153 QFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTM 232 (293)
T ss_dssp HHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSC
T ss_pred hhhccchhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchhhhhhhhhhhhccccchhhhhhhhhhc
Confidence 00 00000011 111111111111 10001 11111111 11111111111110 1112345
Q ss_pred CCCCEEEEEeCCCCCCChHHHH-HHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 281 VDVPVLVFHSADDVMVSTQQVQ-SLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 281 i~~Pvl~i~G~~D~~v~~~~~~-~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
+++|+++|+|++|.++|.+... .+.+..+++++++++++||++++|+|+++++.|.+||+
T Consensus 233 ~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 233 SDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp BCSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred cCCceEEEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHHHhhC
Confidence 7899999999999999976654 45666789999999999999999999999999999984
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=2e-33 Score=239.21 Aligned_cols=248 Identities=20% Similarity=0.271 Sum_probs=173.7
Q ss_pred eeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS 154 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~ 154 (345)
+|++.||.+|+|...|+++ +|||+||++++. ..|..+++.|.++||+|+++|+|| ||.|+.+...
T Consensus 2 ~f~~~dG~~l~y~~~G~g~-~vv~lHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G-------------~G~S~~~~~~ 66 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDWGSGK-PVLFSHGWLLDA-DMWEYQMEYLSSRGYRTIAFDRRG-------------FGRSDQPWTG 66 (271)
T ss_dssp EEECTTSCEEEEEEESSSS-EEEEECCTTCCG-GGGHHHHHHHHTTTCEEEEECCTT-------------STTSCCCSSC
T ss_pred EEEeECCeEEEEEEEcCCC-eEEEECCCCCCH-HHHHHHHHHHHhCCCEEEEEeccc-------------cccccccccc
Confidence 5778899999999999885 799999999995 999999999998899999999999 9999877655
Q ss_pred CCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHH-HHHHHhCCcccceeeEeccCCCCCchh--------HHHHHH
Q psy4974 155 FVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLS-FVFSMKYPHMVHKLVIWGTKSFLTIDN--------VRVFEG 225 (345)
Q Consensus 155 ~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia-~~~a~~~p~~v~~lvl~~~~~~~~~~~--------~~~~~~ 225 (345)
+ +++++++++.++++.++.++++++|||+||.++ ..+|..+|+++.+++++++........ ......
T Consensus 67 ~----~~~~~~~~~~~~~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (271)
T d1va4a_ 67 N----DYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFAR 142 (271)
T ss_dssp C----SHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHH
T ss_pred c----ccccccccceeeeeecCCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHH
Confidence 5 788889999999999999999999999988655 556777899999999998765432111 011110
Q ss_pred hH-hccCCChhhHHH-HHHHcccC-CchhhhhHH-H--------HHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCC
Q psy4974 226 MR-RLSNWSPMARSE-VLKAYDND-VNYITGIFN-Q--------YVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADD 293 (345)
Q Consensus 226 ~~-~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D 293 (345)
.. ............ ....+... ......... . ...............+....+.++++|+++++|++|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D 222 (271)
T d1va4a_ 143 FKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGD 222 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTC
T ss_pred HHHHhhhhhhhhhhhhcchhhcccchhhhhhhHHHHHHhhhhhhhhhhhhhcccccchhhhhhhhhhcccceeecccCCC
Confidence 00 000000000000 00111110 000000000 0 011111112222222334456678999999999999
Q ss_pred CCCChHHHHHHH-hhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 294 VMVSTQQVQSLL-NQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 294 ~~v~~~~~~~~~-~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
.++|.+...++. +.++++++++++++||++++|+|+++++.|.+||++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 223 QIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp SSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 999988776664 556899999999999999999999999999999974
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=1.3e-33 Score=241.23 Aligned_cols=245 Identities=18% Similarity=0.233 Sum_probs=171.3
Q ss_pred EcCceEEEEEcCC-CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCC
Q psy4974 79 IKGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVP 157 (345)
Q Consensus 79 ~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~ 157 (345)
.||.+|+|..+|+ +.|+|||+||++++. ..|..+++.|.++||+|+++|+|| ||.|+.+...+
T Consensus 6 ~dG~~l~y~~~G~~~~~~vv~lHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G-------------~G~s~~~~~~~-- 69 (275)
T d1a88a_ 6 SDGTNIFYKDWGPRDGLPVVFHHGWPLSA-DDWDNQMLFFLSHGYRVIAHDRRG-------------HGRSDQPSTGH-- 69 (275)
T ss_dssp TTSCEEEEEEESCTTSCEEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTT-------------STTSCCCSSCC--
T ss_pred cCCCEEEEEEecCCCCCeEEEECCCCCCH-HHHHHHHHHHHhCCCEEEEEeccc-------------ccccccccccc--
Confidence 3999999999985 347999999999995 999999999988899999999999 99998776665
Q ss_pred ccchHHHHHHHHHHHHHhCCccEEEEEeCh-hHHHHHHHHHhCCcccceeeEeccCCCCCchh--------HHHHHHhHh
Q psy4974 158 FQYIEEDVDIAYELLKLLGVCKVSLFGWCD-GGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN--------VRVFEGMRR 228 (345)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~-Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--------~~~~~~~~~ 228 (345)
+++++++++.++++.++.++++++|||+ ||.+++.+|..+|++|+++|++++........ ...+.....
T Consensus 70 --~~~~~~~~~~~~l~~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (275)
T d1a88a_ 70 --DMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRA 147 (275)
T ss_dssp --SHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHH
T ss_pred --cccccccccccccccccccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhh
Confidence 7788899999999999999999999997 66778888999999999999999754322110 111111100
Q ss_pred c-cCCChhhHHHHH-HHc-cc--C-CchhhhhHHHH--------HHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCC
Q psy4974 229 L-SNWSPMARSEVL-KAY-DN--D-VNYITGIFNQY--------VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDV 294 (345)
Q Consensus 229 ~-~~~~~~~~~~~~-~~~-~~--~-~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~ 294 (345)
. ............ ..+ .. . ........+.+ ..............+....+.++++|+++++|++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~ 227 (275)
T d1a88a_ 148 ALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQ 227 (275)
T ss_dssp HHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCS
T ss_pred hhhhhhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhHHHHhhccccceeecCCCC
Confidence 0 000000000000 000 00 0 00001111111 011111112222223344566789999999999999
Q ss_pred CCChH-HHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 295 MVSTQ-QVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 295 ~v~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
++|.+ ..+.+.+.+|++++++++++||++++|+|+++++.|.+||+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 275 (275)
T d1a88a_ 228 VVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp SSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 99865 456677788999999999999999999999999999999973
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=5.5e-33 Score=238.07 Aligned_cols=239 Identities=15% Similarity=0.177 Sum_probs=165.7
Q ss_pred ceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccch
Q psy4974 82 CDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYI 161 (345)
Q Consensus 82 ~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~ 161 (345)
++|+|.+.|++ |+|||+||++++. ..|..++..|.++||+|+++|+|| ||.|+.+...+ ++
T Consensus 13 v~i~y~~~G~g-~~illlHG~~~~~-~~~~~~~~~l~~~~~~vi~~D~~G-------------~G~S~~~~~~~----~~ 73 (279)
T d1hkha_ 13 IELYYEDQGSG-QPVVLIHGYPLDG-HSWERQTRELLAQGYRVITYDRRG-------------FGGSSKVNTGY----DY 73 (279)
T ss_dssp EEEEEEEESSS-EEEEEECCTTCCG-GGGHHHHHHHHHTTEEEEEECCTT-------------STTSCCCSSCC----SH
T ss_pred EEEEEEEEccC-CeEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEechh-------------hCCcccccccc----ch
Confidence 48999999987 5899999999995 999999988877789999999999 99998776666 78
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeChhH-HHHHHHHHhCCcccceeeEeccCCCCCchh--------HHHHHHhHhccC-
Q psy4974 162 EEDVDIAYELLKLLGVCKVSLFGWCDGG-HLSFVFSMKYPHMVHKLVIWGTKSFLTIDN--------VRVFEGMRRLSN- 231 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~~~~i~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--------~~~~~~~~~~~~- 231 (345)
+++++++.++++.++.++++|+|||||| .++..+|..+|++|.+++++++........ ......+.....
T Consensus 74 ~~~~~di~~~i~~l~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (279)
T d1hkha_ 74 DTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKG 153 (279)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhcCcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhh
Confidence 8889999999999999999999999996 677778888899999999998754322110 011111100000
Q ss_pred CChh-hHHHHHH------HcccCCchhhhhHHHHHHH---------HHHHHHhh-CchhhhccCCCCCCCEEEEEeCCCC
Q psy4974 232 WSPM-ARSEVLK------AYDNDVNYITGIFNQYVDM---------VNLIFKSY-GRNVYQELLPYVDVPVLVFHSADDV 294 (345)
Q Consensus 232 ~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~l~~i~~Pvl~i~G~~D~ 294 (345)
.... ....... ..... ............ ........ ......+.+..+++|+++++|++|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~ 231 (279)
T d1hkha_ 154 DRFAWFTDFYKNFYNLDENLGSR--ISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDN 231 (279)
T ss_dssp CHHHHHHHHHHHHHTHHHHBTTT--BCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCS
T ss_pred hhhhhhhhhhhhhcccchhhhhh--hhhhhhhhhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCC
Confidence 0000 0000000 00000 001111110000 00000000 0011123345578999999999999
Q ss_pred CCChH-HHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 295 MVSTQ-QVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 295 ~v~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+++.+ ..+.+.+.+|++++++++++||+++.|+|+++++.|.+||++
T Consensus 232 ~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 232 ILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp SSCTTTTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 99864 567888888999999999999999999999999999999975
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=1.1e-33 Score=246.96 Aligned_cols=249 Identities=14% Similarity=0.134 Sum_probs=172.7
Q ss_pred EEcCceEEEEEcCC--CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC
Q psy4974 78 SIKGCDIRFIKYGS--GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF 155 (345)
Q Consensus 78 ~~~g~~l~~~~~g~--~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~ 155 (345)
..+|.+++|.+.|+ +.|+|||+||+++++ ..|..++..|.++||+|+++|+|| ||.|+.+...
T Consensus 30 ~~~g~~~~y~~~G~~~~~p~llllHG~~~~~-~~~~~~~~~l~~~~~~vi~~Dl~G-------------~G~S~~~~~~- 94 (310)
T d1b6ga_ 30 GYPGLRAHYLDEGNSDAEDVFLCLHGEPTWS-YLYRKMIPVFAESGARVIAPDFFG-------------FGKSDKPVDE- 94 (310)
T ss_dssp TCTTCEEEEEEEECTTCSCEEEECCCTTCCG-GGGTTTHHHHHHTTCEEEEECCTT-------------STTSCEESCG-
T ss_pred CCCCEEEEEEEecCCCCCCEEEEECCCCCch-HHHHHHHHHhhccCceEEEeeecC-------------cccccccccc-
Confidence 36899999999986 447899999999995 999999999998899999999999 9999855332
Q ss_pred CCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCC---
Q psy4974 156 VPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNW--- 232 (345)
Q Consensus 156 ~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~--- 232 (345)
...++..+++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...........+.........
T Consensus 95 -~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (310)
T d1b6ga_ 95 -EDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFT 173 (310)
T ss_dssp -GGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHH
T ss_pred -ccccccccccchhhhhhhccccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhhhh
Confidence 2237888999999999999999999999999999999999999999999999998654332211111111000000
Q ss_pred ---------ChhhHHHHHHHcccCC----------chhhhhHHHHHHHHHHHH-------HhhCchhhhccCCCCCCCEE
Q psy4974 233 ---------SPMARSEVLKAYDNDV----------NYITGIFNQYVDMVNLIF-------KSYGRNVYQELLPYVDVPVL 286 (345)
Q Consensus 233 ---------~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~i~~Pvl 286 (345)
.......+........ .+...........+.... ..............+++|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 253 (310)
T d1b6ga_ 174 AWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTF 253 (310)
T ss_dssp HHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEE
T ss_pred hhhhhhccchhhhhhhhhhccCccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccCCCeE
Confidence 0000000000000000 000000000000000000 00000111222346789999
Q ss_pred EEEeCCCCCCChHHHHHHHhhcCCc-EEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 287 VFHSADDVMVSTQQVQSLLNQLKFC-QYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 287 ~i~G~~D~~v~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+++|++|.+++++..+.+.+.+++. ++++++++||+++.++|+.+++.|.+||+++
T Consensus 254 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~~ 310 (310)
T d1b6ga_ 254 MAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAETE 310 (310)
T ss_dssp EEEETTCSSSSHHHHHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHHHHHHHTC
T ss_pred EEEeCCCCCCCHHHHHHHHHhcCCCccEEEECCCcCchhhhCHHHHHHHHHHHHhCC
Confidence 9999999999999999999988875 7888999999999999999999999999863
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=7.7e-33 Score=236.23 Aligned_cols=246 Identities=20% Similarity=0.259 Sum_probs=170.2
Q ss_pred eEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC
Q psy4974 76 FFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF 155 (345)
Q Consensus 76 ~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~ 155 (345)
|.+.||.+|+|...|+++ +|||+||++++. ..|..+++.|.++||+|+++|+|| ||.|+.+...+
T Consensus 3 f~~~dG~~i~y~~~G~g~-pvvllHG~~~~~-~~~~~~~~~l~~~~~~vi~~D~~G-------------~G~S~~~~~~~ 67 (273)
T d1a8sa_ 3 FTTRDGTQIYYKDWGSGQ-PIVFSHGWPLNA-DSWESQMIFLAAQGYRVIAHDRRG-------------HGRSSQPWSGN 67 (273)
T ss_dssp EECTTSCEEEEEEESCSS-EEEEECCTTCCG-GGGHHHHHHHHHTTCEEEEECCTT-------------STTSCCCSSCC
T ss_pred EEeeCCcEEEEEEECCCC-eEEEECCCCCCH-HHHHHHHHHHHhCCCEEEEEechh-------------cCccccccccc
Confidence 455699999999999874 799999999995 999999999988889999999999 99998776655
Q ss_pred CCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHH-HHHHHHhCCcccceeeEeccCCCCCch--------hHHHHHHh
Q psy4974 156 VPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHL-SFVFSMKYPHMVHKLVIWGTKSFLTID--------NVRVFEGM 226 (345)
Q Consensus 156 ~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~i-a~~~a~~~p~~v~~lvl~~~~~~~~~~--------~~~~~~~~ 226 (345)
+++++++++.+++++++.++.+++|||+||.+ +..+|..+|++|.+++++++.+..... ....+...
T Consensus 68 ----~~~~~~~~~~~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (273)
T d1a8sa_ 68 ----DMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGI 143 (273)
T ss_dssp ----SHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHH
T ss_pred ----cccchHHHHHHHHHhcCccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhH
Confidence 78888999999999999999999999998865 445566679999999999875532211 01111111
Q ss_pred HhccCC-ChhhHHHHHH-H-cccCC---chhhhhHHHH--------HHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCC
Q psy4974 227 RRLSNW-SPMARSEVLK-A-YDNDV---NYITGIFNQY--------VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSAD 292 (345)
Q Consensus 227 ~~~~~~-~~~~~~~~~~-~-~~~~~---~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~ 292 (345)
...... .......... . +.... .......+.. ..............+....+.++++|+++++|++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~ 223 (273)
T d1a8sa_ 144 RQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDA 223 (273)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETT
T ss_pred HHHHHHHHHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhHHHHhhccceEEEecCC
Confidence 000000 0000000000 0 00000 0000000000 0011111122222233455678899999999999
Q ss_pred CCCCChHHHHHHHhh-cCCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 293 DVMVSTQQVQSLLNQ-LKFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 293 D~~v~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
|.++|.+..+.+.+. .+++++++++++||++++|+|+++++.|.+||+
T Consensus 224 D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 224 DQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp CSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHcC
Confidence 999998777666544 588999999999999999999999999999996
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.7e-33 Score=238.78 Aligned_cols=234 Identities=19% Similarity=0.201 Sum_probs=160.9
Q ss_pred eEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchH
Q psy4974 83 DIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIE 162 (345)
Q Consensus 83 ~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~ 162 (345)
.|+|+..|+++++|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+... ..++.
T Consensus 1 ~i~y~~~G~g~~~lvllHG~~~~~-~~~~~~~~~L~~~-~~vi~~D~~G-------------~G~S~~~~-----~~~~~ 60 (256)
T d1m33a_ 1 NIWWQTKGQGNVHLVLLHGWGLNA-EVWRCIDEELSSH-FTLHLVDLPG-------------FGRSRGFG-----ALSLA 60 (256)
T ss_dssp CCCEEEECCCSSEEEEECCTTCCG-GGGGGTHHHHHTT-SEEEEECCTT-------------STTCCSCC-----CCCHH
T ss_pred CeEEEEECCCCCeEEEECCCCCCH-HHHHHHHHHHhCC-CEEEEEeCCC-------------CCCccccc-----ccccc
Confidence 378999999988999999999995 8999999999864 9999999999 99997543 22443
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh------HHHHHHhHhccCCChhh
Q psy4974 163 EDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN------VRVFEGMRRLSNWSPMA 236 (345)
Q Consensus 163 ~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 236 (345)
+ +.+.+..+..++++++||||||.+++.+|.++|+.+++++++++.+...... ........... ....
T Consensus 61 d----~~~~~~~~~~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 134 (256)
T d1m33a_ 61 D----MAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQL--SDDQ 134 (256)
T ss_dssp H----HHHHHHTTSCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHH--HHHH
T ss_pred c----cccccccccccceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhh--hhhh
Confidence 3 3444455667899999999999999999999999999999998754432111 01111000000 0000
Q ss_pred HHHHHHHcccC---CchhhhhHHHH-----------HHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHH
Q psy4974 237 RSEVLKAYDND---VNYITGIFNQY-----------VDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQ 302 (345)
Q Consensus 237 ~~~~~~~~~~~---~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~ 302 (345)
.......+... ........... ...+..........+....++++++|+++|+|++|.++|.+..+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~ 214 (256)
T d1m33a_ 135 QRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVP 214 (256)
T ss_dssp HHHHHHHHHTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC
T ss_pred HHHHHHHhhhhhccccchhhHHHHHHHhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHH
Confidence 00111110000 00000000000 01111111222222345667789999999999999999999999
Q ss_pred HHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 303 SLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
.+.+.+|++++++++++||++++|+|+++++.|.+||++.
T Consensus 215 ~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~i 254 (256)
T d1m33a_ 215 MLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQRV 254 (256)
T ss_dssp -CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred HHHHHCCCCEEEEECCCCCchHHHCHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999875
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-33 Score=232.84 Aligned_cols=195 Identities=16% Similarity=0.163 Sum_probs=159.9
Q ss_pred eeeeEEEcCceEEEEEcCC----CCceEEEEcCcCCCchhhHHH--HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCC
Q psy4974 73 TEGFFSIKGCDIRFIKYGS----GAQVLFFTYGVLGEIRNSFKK--QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYG 146 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~~~~--~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G 146 (345)
++.+++++|..++|+..++ .+|+|||+||++++. ..|.. .++.|+++||+|+++|+|| ||
T Consensus 7 ~e~~i~v~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~-~~w~~~~~~~~la~~gy~via~D~~G-------------~G 72 (208)
T d1imja_ 7 REGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSS-ETWQNLGTLHRLAQAGYRAVAIDLPG-------------LG 72 (208)
T ss_dssp CCCCEEETTEEECEEEEECSSSCCSCEEEECCCTTCCH-HHHHHHTHHHHHHHTTCEEEEECCTT-------------SG
T ss_pred eEEEEEECCEEEEEEEecCCCCCCCCeEEEECCCCCCh-hHHhhhHHHHHHHHcCCeEEEeeccc-------------cc
Confidence 3678899999999998643 347999999999995 88977 4688999999999999999 99
Q ss_pred CCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh
Q psy4974 147 QSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM 226 (345)
Q Consensus 147 ~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 226 (345)
.|+.+.... .. .....++++.++++.++.++++|+||||||.+|+.+|.++|++++++|+++|......
T Consensus 73 ~S~~~~~~~-~~-~~~~~~~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~~--------- 141 (208)
T d1imja_ 73 HSKEAAAPA-PI-GELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI--------- 141 (208)
T ss_dssp GGTTSCCSS-CT-TSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS---------
T ss_pred CCCCCCccc-cc-chhhhhhhhhhcccccccccccccccCcHHHHHHHHHHHhhhhcceeeecCccccccc---------
Confidence 997654332 21 2233467788899999999999999999999999999999999999999988543100
Q ss_pred HhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHh
Q psy4974 227 RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLN 306 (345)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~ 306 (345)
....+.++++|+|+|+|++|.++|.. .+..+
T Consensus 142 -----------------------------------------------~~~~~~~i~~P~Lii~G~~D~~~~~~--~~~~~ 172 (208)
T d1imja_ 142 -----------------------------------------------NAANYASVKTPALIVYGDQDPMGQTS--FEHLK 172 (208)
T ss_dssp -----------------------------------------------CHHHHHTCCSCEEEEEETTCHHHHHH--HHHHT
T ss_pred -----------------------------------------------ccccccccccccccccCCcCcCCcHH--HHHHH
Confidence 01123467899999999999988754 34556
Q ss_pred hcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHh
Q psy4974 307 QLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 307 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
.+++.++.+++++||..++++|+++.+.+.+||++
T Consensus 173 ~~~~~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~ 207 (208)
T d1imja_ 173 QLPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQG 207 (208)
T ss_dssp TSSSEEEEEETTCCTTHHHHCHHHHHHHHHHHHHT
T ss_pred hCCCCeEEEECCCCCchhhhCHHHHHHHHHHHHhc
Confidence 78999999999999999999999999999999975
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.98 E-value=5.5e-31 Score=230.35 Aligned_cols=249 Identities=16% Similarity=0.175 Sum_probs=163.7
Q ss_pred eeeeEEE-cCceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC
Q psy4974 73 TEGFFSI-KGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP 150 (345)
Q Consensus 73 ~~~~~~~-~g~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~ 150 (345)
+.+++++ ||.+|+|.+.|+. .|+|||+||++++. ..|......+. .||+|+++|+|| ||.|+.
T Consensus 12 ~~~~i~~~dg~~i~y~~~G~~~g~pvvllHG~~g~~-~~~~~~~~~l~-~~~~Vi~~D~rG-------------~G~S~~ 76 (313)
T d1azwa_ 12 QQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGG-CNDKMRRFHDP-AKYRIVLFDQRG-------------SGRSTP 76 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTC-CCGGGGGGSCT-TTEEEEEECCTT-------------STTSBS
T ss_pred CCCEEEeCCCcEEEEEEecCCCCCEEEEECCCCCCc-cchHHHhHHhh-cCCEEEEEeccc-------------cCCCCc
Confidence 4788888 7889999999853 37899999999885 77776554444 469999999999 999986
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHH-------
Q psy4974 151 KGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVF------- 223 (345)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~------- 223 (345)
+... ...++.++++++.+++++++.++++|+||||||.+++.+|.++|++|++++++++............
T Consensus 77 ~~~~--~~~~~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~ 154 (313)
T d1azwa_ 77 HADL--VDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRL 154 (313)
T ss_dssp TTCC--TTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHH
T ss_pred cccc--cchhHHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccchhhhhhcccchh
Confidence 5443 2226788999999999999999999999999999999999999999999999998765432211110
Q ss_pred -----HH-hHhcc--CCChhhHHHHHHHcccCC--------------------chhhhhH--------HHHHHHHHHHHH
Q psy4974 224 -----EG-MRRLS--NWSPMARSEVLKAYDNDV--------------------NYITGIF--------NQYVDMVNLIFK 267 (345)
Q Consensus 224 -----~~-~~~~~--~~~~~~~~~~~~~~~~~~--------------------~~~~~~~--------~~~~~~~~~~~~ 267 (345)
.. ..... .................. ....... ......+...+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (313)
T d1azwa_ 155 FPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYF 234 (313)
T ss_dssp CHHHHHHHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhhhhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHHHHHHH
Confidence 00 00000 000000000000000000 0000000 000001111110
Q ss_pred hh------CchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccc-cChHHHHHHHHHH
Q psy4974 268 SY------GRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHI-KHGQVFNEISRNF 338 (345)
Q Consensus 268 ~~------~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~f 338 (345)
.. ...........+++|+++|+|++|.++|++.++.+.+.+|++++++++++||+++. +..+++.+++.+|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~l~~~~p~a~~~~i~~aGH~~~ep~~~~~li~a~~~f 312 (313)
T d1azwa_ 235 VNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPKAQLQISPASGHSAFEPENVDALVRATDGF 312 (313)
T ss_dssp HTGGGCSSTTHHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred hhccccccchhhhHhhhhcCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCchHHHHHHHHHHHh
Confidence 00 01112334556789999999999999999999999999999999999999999762 2223444555554
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.97 E-value=2.4e-31 Score=223.66 Aligned_cols=230 Identities=13% Similarity=0.058 Sum_probs=160.1
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
++|||+||+++++ ..|..+++.|+++||+|+++|+|| ||.|+.+.. ...++.+.+.++..+++
T Consensus 3 ~~vvllHG~~~~~-~~w~~~~~~L~~~g~~vi~~Dl~G-------------~G~S~~~~~---~~~~~~~~~~~~~~~~~ 65 (258)
T d1xkla_ 3 KHFVLVHGACHGG-WSWYKLKPLLEAAGHKVTALDLAA-------------SGTDLRKIE---ELRTLYDYTLPLMELME 65 (258)
T ss_dssp CEEEEECCTTCCG-GGGTTHHHHHHHTTCEEEECCCTT-------------STTCCCCGG---GCCSHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCCH-HHHHHHHHHHHhCCCEEEEecCCC-------------CCCCCCCCC---CCcchHHHHHHHhhhhh
Confidence 4899999999995 999999999999899999999999 999976543 22367888888888888
Q ss_pred HhCC-ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH-HHHHHhHhccCCCh-----------------
Q psy4974 174 LLGV-CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV-RVFEGMRRLSNWSP----------------- 234 (345)
Q Consensus 174 ~~~~-~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~----------------- 234 (345)
.... .+++++|||+||.+++.++.++|++++++|++++......... ..............
T Consensus 66 ~~~~~~~~~lvghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (258)
T d1xkla_ 66 SLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLT 145 (258)
T ss_dssp TSCSSSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCE
T ss_pred cccccccccccccchhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence 8765 4899999999999999999999999999999997654322211 11111111000000
Q ss_pred ---hhHHHHHHHcccCCchhhhhHHHHHHHHH---HHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc
Q psy4974 235 ---MARSEVLKAYDNDVNYITGIFNQYVDMVN---LIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL 308 (345)
Q Consensus 235 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~ 308 (345)
............. .............. ..............+..+++|+++|+|++|.++|++..+.+.+.+
T Consensus 146 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 223 (258)
T d1xkla_ 146 SMFFGPKFLAHKLYQL--CSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNI 223 (258)
T ss_dssp EEECCHHHHHHHTSTT--SCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHH
T ss_pred cccccHHHHHHHhhhc--ccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHHHHHHHHHHC
Confidence 0001111111111 00000000000000 000000111223345567899999999999999999999999999
Q ss_pred CCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 309 KFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 309 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+++++++++++||++++|+|+++++.|.+|+++.
T Consensus 224 ~~~~~~~i~~~gH~~~~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 224 GVTEAIEIKGADHMAMLCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp CCSEEEEETTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999875
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.97 E-value=1.1e-29 Score=218.29 Aligned_cols=250 Identities=14% Similarity=0.066 Sum_probs=165.6
Q ss_pred eeeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 73 TEGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
+.++++++|.+++|.+.|++ |+|||+||++++. ..|..+++.|++. |+|+++|+|| ||.|+.+.
T Consensus 9 ~~~fi~~~g~~i~y~~~G~g-~~vvllHG~~~~~-~~~~~~~~~L~~~-~~vi~~Dl~G-------------~G~S~~~~ 72 (298)
T d1mj5a_ 9 EKKFIEIKGRRMAYIDEGTG-DPILFQHGNPTSS-YLWRNIMPHCAGL-GRLIACDLIG-------------MGDSDKLD 72 (298)
T ss_dssp CCEEEEETTEEEEEEEESCS-SEEEEECCTTCCG-GGGTTTGGGGTTS-SEEEEECCTT-------------STTSCCCS
T ss_pred CCEEEEECCEEEEEEEEcCC-CcEEEECCCCCCH-HHHHHHHHHHhcC-CEEEEEeCCC-------------CCCCCCCc
Confidence 36899999999999999987 5899999999995 9999999999886 9999999999 99998765
Q ss_pred CCCCCccchHHHHHHHHHHHHH-hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH------HHHHH
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKL-LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV------RVFEG 225 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~-~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~------~~~~~ 225 (345)
.............+++..++.. .+.++++++||||||.+++.+|.++|++|.+++++++......... .....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (298)
T d1mj5a_ 73 PSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQA 152 (298)
T ss_dssp SCSTTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHH
T ss_pred cccccccccchhhhhhccccccccccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhhhh
Confidence 4431222344555555555444 4567999999999999999999999999999999987654322110 00000
Q ss_pred hH-----hccC-CChhhHHHHHHHcccCCchhhhhHHHHHH----------HHHH-----------HHHhhCchhhhccC
Q psy4974 226 MR-----RLSN-WSPMARSEVLKAYDNDVNYITGIFNQYVD----------MVNL-----------IFKSYGRNVYQELL 278 (345)
Q Consensus 226 ~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-----------~~~~~~~~~~~~~l 278 (345)
.. .... ................ ........... .... ........+....+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (298)
T d1mj5a_ 153 FRSQAGEELVLQDNVFVEQVLPGLILRP--LSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWL 230 (298)
T ss_dssp HHSTTHHHHHTTTCHHHHTHHHHTSSSC--CCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhhhhhhhhcccccccc--chhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhhhhhhhhh
Confidence 00 0000 0000000000000000 00000000000 0000 00000011223446
Q ss_pred CCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 279 PYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 279 ~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
..+++|+++++|++|.+.+ ...+.+.+.+|+.+++++ ++||++++|+|+++++.|.+||++.
T Consensus 231 ~~~~~P~l~i~g~~d~~~~-~~~~~~~~~~p~~~~~~~-~~GH~~~~e~P~~v~~~i~~fl~~~ 292 (298)
T d1mj5a_ 231 SESPIPKLFINAEPGALTT-GRMRDFCRTWPNQTEITV-AGAHFIQEDSPDEIGAAIAAFVRRL 292 (298)
T ss_dssp TTCCSCEEEEEEEECSSSS-HHHHHHHTTCSSEEEEEE-EESSCGGGTCHHHHHHHHHHHHHHH
T ss_pred hhcceeEEEEecCCCCcCh-HHHHHHHHHCCCCEEEEe-CCCCchHHhCHHHHHHHHHHHHhhh
Confidence 6789999999999998766 456778888898887766 5799999999999999999999875
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.97 E-value=5.6e-31 Score=221.67 Aligned_cols=226 Identities=12% Similarity=0.048 Sum_probs=157.6
Q ss_pred EEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh
Q psy4974 96 LFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLL 175 (345)
Q Consensus 96 vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~ 175 (345)
.|||||+++++ ..|..+++.|+++||+|+++|+|| ||.|+.+.. ...+++++++++.+++...
T Consensus 5 ~vliHG~~~~~-~~w~~~~~~L~~~g~~Via~Dl~G-------------~G~S~~~~~---~~~~~~~~~~~l~~~~~~~ 67 (256)
T d3c70a1 5 FVLIHTICHGA-WIWHKLKPLLEALGHKVTALDLAA-------------SGVDPRQIE---EIGSFDEYSEPLLTFLEAL 67 (256)
T ss_dssp EEEECCTTCCG-GGGTTHHHHHHHTTCEEEEECCTT-------------STTCSCCGG---GCCSHHHHTHHHHHHHHHS
T ss_pred EEEeCCCCCCH-HHHHHHHHHHHhCCCEEEEEcCCC-------------CCCCCCCCC---CCCCHHHHHHHhhhhhhhh
Confidence 58999999995 999999999999999999999999 999976543 2236788899999998886
Q ss_pred C-CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHH-HHHHhH-hccCCC-----------------hh
Q psy4974 176 G-VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVR-VFEGMR-RLSNWS-----------------PM 235 (345)
Q Consensus 176 ~-~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~-~~~~~~-----------------~~ 235 (345)
. .++++|+||||||.+++.++.++|++|+++|++++.......... ...... ...... ..
T Consensus 68 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (256)
T d3c70a1 68 PPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKL 147 (256)
T ss_dssp CTTCCEEEEEETTHHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEEC
T ss_pred ccccceeecccchHHHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhh
Confidence 5 678999999999999999999999999999999976443222111 111110 000000 00
Q ss_pred hHHHHHHHcccCCchhhhhHHHHHHHHHH-----HHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC
Q psy4974 236 ARSEVLKAYDNDVNYITGIFNQYVDMVNL-----IFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF 310 (345)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~ 310 (345)
........+... .... ......... ................+++|+++|+|++|.++|++..+.+.+.+|+
T Consensus 148 ~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~ 223 (256)
T d3c70a1 148 GFTLLRENLYTL--CGPE--EYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKP 223 (256)
T ss_dssp CHHHHHHHTSTT--SCHH--HHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSCC
T ss_pred hhhhhhhhhhhh--cchh--hHHHhhhhhhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHCCC
Confidence 111111111111 0000 000000000 0001111111223345679999999999999999999999999999
Q ss_pred cEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 311 CQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 311 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+++++++++||++++|+|+++++.|.+|+++.
T Consensus 224 ~~~~~i~~agH~~~~e~P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 224 DKVYKVEGGDHKLQLTKTKEIAEILQEVADTY 255 (256)
T ss_dssp SEEEECCSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999764
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.97 E-value=2.1e-28 Score=211.58 Aligned_cols=245 Identities=15% Similarity=0.164 Sum_probs=164.4
Q ss_pred ceeeeEEE-cCceEEEEEcCCC-CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC
Q psy4974 72 FTEGFFSI-KGCDIRFIKYGSG-AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 72 ~~~~~~~~-~g~~l~~~~~g~~-~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
.+++++++ ||.+|+|.+.|+. .|+|||+||+++++ ..|..+...|++ ||+|+++|+|| ||.|+
T Consensus 11 ~~~~~v~~~dG~~i~y~~~G~~~g~pvvllHG~~~~~-~~w~~~~~~l~~-~~~vi~~D~rG-------------~G~S~ 75 (313)
T d1wm1a_ 11 YDSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGG-ISPHHRQLFDPE-RYKVLLFDQRG-------------CGRSR 75 (313)
T ss_dssp SEEEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCC-CCGGGGGGSCTT-TEEEEEECCTT-------------STTCB
T ss_pred CcCCEEEeCCCcEEEEEEecCCCCCeEEEECCCCCcc-cchHHHHHHhhc-CCEEEEEeCCC-------------ccccc
Confidence 34788888 7999999999863 47899999999995 999998887776 69999999999 99997
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHH------
Q psy4974 150 PKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVF------ 223 (345)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~------ 223 (345)
.+... ...+....++++..+++.++.++++++|||+||.++..+|..+|++|.+++++++............
T Consensus 76 ~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~ 153 (313)
T d1wm1a_ 76 PHASL--DNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASR 153 (313)
T ss_dssp STTCC--TTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGG
T ss_pred ccccc--cccchhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhhhheeeeecccccccccccccccccccch
Confidence 65443 2336778899999999999999999999999999999999999999999999987654321111000
Q ss_pred ------HHhHhccCC-----------------Chh-hHHHHH-----HHccc----CCchhhhhHHHHHHHH---HHH-H
Q psy4974 224 ------EGMRRLSNW-----------------SPM-ARSEVL-----KAYDN----DVNYITGIFNQYVDMV---NLI-F 266 (345)
Q Consensus 224 ------~~~~~~~~~-----------------~~~-~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~---~~~-~ 266 (345)
......... ... ...... ..... ................ ... .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (313)
T d1wm1a_ 154 FFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYF 233 (313)
T ss_dssp TSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHHhhhhhhhhhhh
Confidence 000000000 000 000000 00000 0000000000000000 000 0
Q ss_pred Hh-----hCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHH
Q psy4974 267 KS-----YGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEIS 335 (345)
Q Consensus 267 ~~-----~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 335 (345)
.. ............+++||++|+|++|.++|.+.++.+++.+|++++++++++||++ ++|+.+.+.|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~p~~~~~~l~~~~p~a~~~~i~~aGH~~--~eP~~~~~lv 305 (313)
T d1wm1a_ 234 THLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSY--DEPGILHQLM 305 (313)
T ss_dssp HTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEETTCCSST--TSHHHHHHHH
T ss_pred hhhcccccchhhhhhhhhhCCCCEEEEEECCCCccCHHHHHHHHHHCCCCEEEEECCCCCCc--CCchHHHHHH
Confidence 00 0111123344567899999999999999999999999999999999999999965 4576665443
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.96 E-value=6.6e-29 Score=209.22 Aligned_cols=240 Identities=15% Similarity=0.099 Sum_probs=147.4
Q ss_pred cCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCcc
Q psy4974 80 KGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQ 159 (345)
Q Consensus 80 ~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~ 159 (345)
.+.+++|...+.++|+|||+||++++. ..|..+++.|++.||+|+++|+|| ||.|....... .
T Consensus 3 ~~~~lh~~~~~~~~P~ivllHG~~~~~-~~~~~~~~~L~~~g~~vi~~Dl~G-------------~G~s~~~~~~~--~- 65 (264)
T d1r3da_ 3 LSNQLHFAKPTARTPLVVLVHGLLGSG-ADWQPVLSHLARTQCAALTLDLPG-------------HGTNPERHCDN--F- 65 (264)
T ss_dssp CCEEEESSCCBTTBCEEEEECCTTCCG-GGGHHHHHHHTTSSCEEEEECCTT-------------CSSCC----------
T ss_pred cCCeEEEcCCCCCCCeEEEeCCCCCCH-HHHHHHHHHHHhCCCEEEEEeccc-------------ccccccccccc--c-
Confidence 456788888777778999999999995 999999999998899999999999 99997654322 1
Q ss_pred chHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhH--HHHHHh---Hhcc--CC
Q psy4974 160 YIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNV--RVFEGM---RRLS--NW 232 (345)
Q Consensus 160 ~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~~~---~~~~--~~ 232 (345)
.......+........+.++++++||||||.+|+.+|.++|+.+.+++++.+......... ...... .... ..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (264)
T d1r3da_ 66 AEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFS 145 (264)
T ss_dssp CHHHHHHHHHHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhhhcccccccccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhh
Confidence 1222222333333344567999999999999999999999999998888765443221111 000000 0000 00
Q ss_pred ChhhHHHHHHHcccCC--chhhhhHHHHH--------HHHHHHHHh---hCchhhhccCCCCCCCEEEEEeCCCCCCChH
Q psy4974 233 SPMARSEVLKAYDNDV--NYITGIFNQYV--------DMVNLIFKS---YGRNVYQELLPYVDVPVLVFHSADDVMVSTQ 299 (345)
Q Consensus 233 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~--------~~~~~~~~~---~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~ 299 (345)
...........+.... ........... ......... .........+..+++|+++++|++|..+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~--- 222 (264)
T d1r3da_ 146 QQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF--- 222 (264)
T ss_dssp HSCHHHHHHHHTTSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH---
T ss_pred hhhhhhhhhhhhhhhhhcccchHHHHHHHHHHhhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHH---
Confidence 0000011111111110 00000000000 001111111 1111223445678999999999999643
Q ss_pred HHHHHHhhcCCcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 300 QVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
..+.+ .+++++++++++||++++|+|+++++.|.+||++.
T Consensus 223 --~~~~~-~~~~~~~~i~~~gH~~~~e~P~~~~~~i~~fl~~l 262 (264)
T d1r3da_ 223 --QQLAE-SSGLSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp --HHHHH-HHCSEEEEETTCCSCHHHHCHHHHHHHHHHHHHHH
T ss_pred --HHHHh-cCCCeEEEECCCCCchHHHCHHHHHHHHHHHHHhc
Confidence 23333 36889999999999999999999999999999875
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.96 E-value=6.5e-28 Score=200.38 Aligned_cols=221 Identities=14% Similarity=0.160 Sum_probs=149.9
Q ss_pred CceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 93 ~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
+++|||+||++++. ..|..+++.|+++||+|+++|+|| ||.|..+.... ...........+...+
T Consensus 11 ~~~vvliHG~~~~~-~~~~~l~~~L~~~G~~v~~~D~~G-------------~G~s~~~~~~~-~~~~~~~~~~~~~~~~ 75 (242)
T d1tqha_ 11 ERAVLLLHGFTGNS-ADVRMLGRFLESKGYTCHAPIYKG-------------HGVPPEELVHT-GPDDWWQDVMNGYEFL 75 (242)
T ss_dssp SCEEEEECCTTCCT-HHHHHHHHHHHHTTCEEEECCCTT-------------SSSCHHHHTTC-CHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEeCCC-------------Ccccccccccc-chhHHHHHHHHHHhhh
Confidence 35899999999995 999999999999999999999999 99986544433 2223333444455556
Q ss_pred HHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHh------ccCCChhhHHHHHHHccc
Q psy4974 173 KLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRR------LSNWSPMARSEVLKAYDN 246 (345)
Q Consensus 173 ~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 246 (345)
+..+.++++++|||+||.+++.++.++|. ..+++++++................ ..................
T Consensus 76 ~~~~~~~~~l~G~S~Gg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (242)
T d1tqha_ 76 KNKGYEKIAVAGLSLGGVFSLKLGYTVPI--EGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQ 153 (242)
T ss_dssp HHHTCCCEEEEEETHHHHHHHHHHTTSCC--SCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTT
T ss_pred hhcccCceEEEEcchHHHHhhhhcccCcc--cccccccccccccchhHHHHHHHHHHHHHhhhccchhhhHHHHHhhhhh
Confidence 77788899999999999999999999874 4566666655544332221111111 001111111111111111
Q ss_pred CCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc--CCcEEEEeCCCCCccc
Q psy4974 247 DVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL--KFCQYYQFSSGGHSCH 324 (345)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 324 (345)
. ............ ......+..+++|+|+++|++|.++|.+.++.+.+.+ +++++++++++||+++
T Consensus 154 ~---~~~~~~~~~~~~---------~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 221 (242)
T d1tqha_ 154 T---PMKTLKALQELI---------ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVIT 221 (242)
T ss_dssp S---CCTTHHHHHHHH---------HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGG
T ss_pred h---ccchhhcccccc---------cccccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEECCCCCcCc
Confidence 1 000000000000 1123445678999999999999999999999999987 4689999999999999
Q ss_pred cc-ChHHHHHHHHHHHHhh
Q psy4974 325 IK-HGQVFNEISRNFILEE 342 (345)
Q Consensus 325 ~~-~~~~~~~~i~~fl~~~ 342 (345)
.+ +++++.+.|.+||++.
T Consensus 222 ~~~~~~~~~~~i~~Fl~~l 240 (242)
T d1tqha_ 222 LDQEKDQLHEDIYAFLESL 240 (242)
T ss_dssp GSTTHHHHHHHHHHHHHHS
T ss_pred cccCHHHHHHHHHHHHHhC
Confidence 86 5899999999999875
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.95 E-value=2.8e-27 Score=210.93 Aligned_cols=259 Identities=13% Similarity=0.067 Sum_probs=160.0
Q ss_pred CcceeeeEEE-cCceEEEEE--cC-------CCCceEEEEcCcCCCchhhHH------HHHHhhCCCCeEEEEeCCCCch
Q psy4974 70 DVFTEGFFSI-KGCDIRFIK--YG-------SGAQVLFFTYGVLGEIRNSFK------KQLTAFDPKLFTSIFWDPPGNV 133 (345)
Q Consensus 70 ~~~~~~~~~~-~g~~l~~~~--~g-------~~~p~vv~lHG~~~~~~~~~~------~~~~~L~~~G~~vi~~D~~G~~ 133 (345)
+..+.++++. ||..|.... .+ ..+|+|||+||+++++ ..|. .++..|+++||+|+++|+||
T Consensus 25 y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~-~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG-- 101 (377)
T d1k8qa_ 25 YPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASA-TNWISNLPNNSLAFILADAGYDVWLGNSRG-- 101 (377)
T ss_dssp CCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCG-GGGSSSCTTTCHHHHHHHTTCEEEECCCTT--
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccch-hHHhhcCccchHHHHHHHCCCEEEEEcCCC--
Confidence 3344666665 887665432 11 1347999999999995 8883 47888999999999999999
Q ss_pred hhhccCCccCCCCCCCCCCCCCC-----Cccch-----HHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCccc
Q psy4974 134 VLYLLGKTCSGYGQSLPKGRSFV-----PFQYI-----EEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMV 203 (345)
Q Consensus 134 ~~~~~g~~~~~~G~s~~~~~~~~-----~~~~~-----~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v 203 (345)
||.|+.+..... ...++ .+..+.+..+++..+.++++++||||||.+++.+|..+|+.+
T Consensus 102 -----------~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~ 170 (377)
T d1k8qa_ 102 -----------NTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLA 170 (377)
T ss_dssp -----------STTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHH
T ss_pred -----------CCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhh
Confidence 999975332100 11122 234556677788889999999999999999999999999999
Q ss_pred ceeeEeccCCCCCc---h---hHH-------HHHHhHh--ccCC-----------------Chh-hHHHHHHHcccCCch
Q psy4974 204 HKLVIWGTKSFLTI---D---NVR-------VFEGMRR--LSNW-----------------SPM-ARSEVLKAYDNDVNY 250 (345)
Q Consensus 204 ~~lvl~~~~~~~~~---~---~~~-------~~~~~~~--~~~~-----------------~~~-~~~~~~~~~~~~~~~ 250 (345)
++++++........ . ... ....... .... ... ...............
T Consensus 171 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (377)
T d1k8qa_ 171 KRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMN 250 (377)
T ss_dssp TTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGG
T ss_pred hhceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCccc
Confidence 88887664322110 0 000 0000000 0000 000 000000000000000
Q ss_pred h-hhhHH------------HHHHHHHHHH------------------HhhCchhhhccCCCCCCCEEEEEeCCCCCCChH
Q psy4974 251 I-TGIFN------------QYVDMVNLIF------------------KSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQ 299 (345)
Q Consensus 251 ~-~~~~~------------~~~~~~~~~~------------------~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~ 299 (345)
. ..... .....+.... ...........+.++++|+|+|+|++|.+++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~ 330 (377)
T d1k8qa_ 251 LNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPH 330 (377)
T ss_dssp SCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHH
T ss_pred ccHHHhhhhhhcccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccCHH
Confidence 0 00000 0001111111 111111223356788999999999999999999
Q ss_pred HHHHHHhhcCCc-EEEEeCCCCCcccc---cChHHHHHHHHHHHHhh
Q psy4974 300 QVQSLLNQLKFC-QYYQFSSGGHSCHI---KHGQVFNEISRNFILEE 342 (345)
Q Consensus 300 ~~~~~~~~~~~~-~~~~~~~~gH~~~~---~~~~~~~~~i~~fl~~~ 342 (345)
..+.+.+.+|+. +.++++++||+.++ +.++++...|.+||+++
T Consensus 331 ~~~~l~~~lp~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~~ 377 (377)
T d1k8qa_ 331 DVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp HHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred HHHHHHHHCCCCeEEEEeCCCCCcchhhccchHHHHHHHHHHHHhcC
Confidence 999999999985 78889999998433 56899999999999864
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.95 E-value=2.2e-27 Score=214.02 Aligned_cols=247 Identities=14% Similarity=0.062 Sum_probs=164.1
Q ss_pred eeeEEEcCceEEEEEcC---CCCceEEEEcCcCCCchhhHHHHHHhhCCCC------eEEEEeCCCCchhhhccCCccCC
Q psy4974 74 EGFFSIKGCDIRFIKYG---SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKL------FTSIFWDPPGNVVLYLLGKTCSG 144 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g---~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G------~~vi~~D~~G~~~~~~~g~~~~~ 144 (345)
...++++|.+|||.... ++.++|||+||++++. ..|..+++.|++.| |+|+++|+||
T Consensus 84 ~f~~~i~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~-~~w~~vi~~La~~g~~~~~~f~VIaPDLpG------------- 149 (394)
T d1qo7a_ 84 QFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSF-VEFYPILQLFREEYTPETLPFHLVVPSLPG------------- 149 (394)
T ss_dssp EEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCG-GGGHHHHHHHHHHCCTTTCCEEEEEECCTT-------------
T ss_pred CeEEEECCEEEEEEEEeccCCCCCEEEEeccccccH-HHHHHHHHhhccccCCcccceeeecccccc-------------
Confidence 44577899999997643 3347999999999995 99999999999877 9999999999
Q ss_pred CCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchh-----
Q psy4974 145 YGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDN----- 219 (345)
Q Consensus 145 ~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~----- 219 (345)
||.|+.+... ...+..+.++++..+++.++.++.+++|||+||.++..++..+|+.+.+++++..........
T Consensus 150 ~G~S~~P~~~--~~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~~~~~ 227 (394)
T d1qo7a_ 150 YTFSSGPPLD--KDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIES 227 (394)
T ss_dssp STTSCCCCSS--SCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSCCGGG
T ss_pred cCCCCCCCCC--CccCHHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEeeeccccccccccccc
Confidence 9999876432 122678889999999999999999999999999999999999999999999887654322110
Q ss_pred -----HHHHHHhHhc-cCCC---------------------hhhHHHHHHHcccC--CchhhhhHHHHHHHHHHH-----
Q psy4974 220 -----VRVFEGMRRL-SNWS---------------------PMARSEVLKAYDND--VNYITGIFNQYVDMVNLI----- 265 (345)
Q Consensus 220 -----~~~~~~~~~~-~~~~---------------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----- 265 (345)
...+...... .... ......+...+... ...... .....+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~ 304 (394)
T d1qo7a_ 228 LSAAEKEGIARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSE---TILEMVSLYWLTES 304 (394)
T ss_dssp SCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHH---HHHHHHHHHHHTTC
T ss_pred chhhhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcccccCCHH---HHHHHHHHHhhccc
Confidence 0000000000 0000 00000000000000 000000 000101000
Q ss_pred --------HHhhC------chhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC-cEEEEeCCCCCcccccChHH
Q psy4974 266 --------FKSYG------RNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF-CQYYQFSSGGHSCHIKHGQV 330 (345)
Q Consensus 266 --------~~~~~------~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~ 330 (345)
..... .........+|++|+++++|.+|...+++ .+.+.+++ .++.++++|||++++|+|++
T Consensus 305 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~---~~~~~~~~~~~~~~~~~~GHf~~~E~Pe~ 381 (394)
T d1qo7a_ 305 FPRAIHTYRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPR---SWIATTGNLVFFRDHAEGGHFAALERPRE 381 (394)
T ss_dssp HHHHGGGHHHHCC---------CTTTTTCEEEEEEEEECTBSSSCCCH---HHHGGGEEEEEEEECSSCBSCHHHHCHHH
T ss_pred cchhHHHHHHHhhcccccchhhhhccCCcccCCeEEEEeCCCccccHH---HHHHhccCceEEEEcCCcCCchHHhCHHH
Confidence 00000 01112234467899999999999876653 34555555 46778999999999999999
Q ss_pred HHHHHHHHHHhh
Q psy4974 331 FNEISRNFILEE 342 (345)
Q Consensus 331 ~~~~i~~fl~~~ 342 (345)
+++.|.+||++.
T Consensus 382 ~a~~I~~Fl~~v 393 (394)
T d1qo7a_ 382 LKTDLTAFVEQV 393 (394)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999874
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.94 E-value=6.3e-27 Score=203.21 Aligned_cols=228 Identities=12% Similarity=0.121 Sum_probs=142.3
Q ss_pred eeeEEE-cCceEEEEEcCC------CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCC-
Q psy4974 74 EGFFSI-KGCDIRFIKYGS------GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGY- 145 (345)
Q Consensus 74 ~~~~~~-~g~~l~~~~~g~------~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~- 145 (345)
.+.+++ ||..|++....+ .+++||++||++++. ..|..+++.|+++||+|+++|+|| |
T Consensus 6 ~h~~~~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~-~~~~~~a~~L~~~G~~Vi~~D~rG-------------h~ 71 (302)
T d1thta_ 6 AHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRM-DHFAGLAEYLSTNGFHVFRYDSLH-------------HV 71 (302)
T ss_dssp EEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGG-GGGHHHHHHHHTTTCCEEEECCCB-------------CC
T ss_pred eeEEEcCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchH-HHHHHHHHHHHHCCCEEEEecCCC-------------CC
Confidence 567777 888888776531 236899999999995 899999999999999999999999 9
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHH
Q psy4974 146 GQSLPKGRSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEG 225 (345)
Q Consensus 146 G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 225 (345)
|.|+.....+ +...+.+.+..+.++++..+.++++|+||||||.+|+.+|.. .+++++|+.+|...........+..
T Consensus 72 G~S~g~~~~~-~~~~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~~~~~~~~~~ 148 (302)
T d1thta_ 72 GLSSGSIDEF-TMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLRDTLEKALGF 148 (302)
T ss_dssp --------CC-CHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHHHHHHHHHSS
T ss_pred CCCCCcccCC-CHHHHHHHHHHHHHhhhccCCceeEEEEEchHHHHHHHHhcc--cccceeEeecccccHHHHHHHHHhh
Confidence 8887655555 333333333444455555577899999999999999998865 3589999998876533222111110
Q ss_pred hHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhC--chhhhccCCCCCCCEEEEEeCCCCCCChHHHHH
Q psy4974 226 MRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYG--RNVYQELLPYVDVPVLVFHSADDVMVSTQQVQS 303 (345)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~ 303 (345)
..... ... ......... ........+... ...... .....+.+.++++|+|+++|++|.+||.+.++.
T Consensus 149 ~~~~~--~~~---~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~V~~~~~~~ 218 (302)
T d1thta_ 149 DYLSL--PID---ELPNDLDFE--GHKLGSEVFVRD---CFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYD 218 (302)
T ss_dssp CGGGS--CGG---GCCSEEEET--TEEEEHHHHHHH---HHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHH
T ss_pred ccchh--hhh---hcccccccc--ccchhhHHHHHH---HHHhHHHHHHHHHHHHhhcCCCEEEEEeCCCCccCHHHHHH
Confidence 00000 000 000000000 000000111111 111000 011234567899999999999999999999999
Q ss_pred HHhhcC--CcEEEEeCCCCCcccccChH
Q psy4974 304 LLNQLK--FCQYYQFSSGGHSCHIKHGQ 329 (345)
Q Consensus 304 ~~~~~~--~~~~~~~~~~gH~~~~~~~~ 329 (345)
+++.++ ++++++++|++|.+. |++.
T Consensus 219 l~~~i~s~~~kl~~~~g~~H~l~-e~~~ 245 (302)
T d1thta_ 219 MLAHIRTGHCKLYSLLGSSHDLG-ENLV 245 (302)
T ss_dssp HHTTCTTCCEEEEEETTCCSCTT-SSHH
T ss_pred HHHhCCCCCceEEEecCCCcccc-cChH
Confidence 999885 579999999999865 5454
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=7.8e-27 Score=197.36 Aligned_cols=101 Identities=12% Similarity=0.113 Sum_probs=90.2
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCC--CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPK--LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~--G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
|||||+||++++. ..|..+++.|.+. ||+|+++|+|| ||.|..+. ..+++++++++.++
T Consensus 3 ~PvvllHG~~~~~-~~~~~~~~~l~~~~~~~~v~~~d~~G-------------~g~S~~~~-----~~~~~~~~~~l~~~ 63 (268)
T d1pjaa_ 3 KPVIVVHGLFDSS-YSFRHLLEYINETHPGTVVTVLDLFD-------------GRESLRPL-----WEQVQGFREAVVPI 63 (268)
T ss_dssp CCEEEECCTTCCG-GGGHHHHHHHHHHSTTCCEEECCSSC-------------SGGGGSCH-----HHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCH-HHHHHHHHHHHhhCCCeEEEEeCCCC-------------CCCCCCcc-----ccCHHHHHHHHHHH
Confidence 5899999999995 9999999999764 79999999999 99997653 23678889999999
Q ss_pred HHHhCCccEEEEEeChhHHHHHHHHHhCCc-ccceeeEeccCCC
Q psy4974 172 LKLLGVCKVSLFGWCDGGHLSFVFSMKYPH-MVHKLVIWGTKSF 214 (345)
Q Consensus 172 l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~ 214 (345)
+++++ ++++|+||||||.+|+.+|.++|+ +|+++|+++++..
T Consensus 64 l~~l~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~~~ 106 (268)
T d1pjaa_ 64 MAKAP-QGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQM 106 (268)
T ss_dssp HHHCT-TCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTT
T ss_pred HhccC-CeEEEEccccHHHHHHHHHHHCCccccceEEEECCCCc
Confidence 99998 999999999999999999999998 6999999998544
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.92 E-value=3.7e-23 Score=183.56 Aligned_cols=228 Identities=15% Similarity=0.194 Sum_probs=156.0
Q ss_pred eeeeEEEcCceEEEEEc---CCCC-ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCC
Q psy4974 73 TEGFFSIKGCDIRFIKY---GSGA-QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS 148 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~---g~~~-p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s 148 (345)
+.-.+.++|..|..... ++++ |+||++||+.++. ..|..+.+.|.++||.|+++|+|| +|.|
T Consensus 107 e~v~ip~dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~-e~~~~~~~~l~~~G~~vl~~D~~G-------------~G~s 172 (360)
T d2jbwa1 107 ERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTK-EESFQMENLVLDRGMATATFDGPG-------------QGEM 172 (360)
T ss_dssp EEEEEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCT-TTTHHHHHHHHHTTCEEEEECCTT-------------SGGG
T ss_pred EEeecCcCCcccceEEEecCCCCCceEEEEeCCCCccH-HHHHHHHHHHHhcCCEEEEEcccc-------------cccc
Confidence 34556669988886654 2333 7899999998884 778888999999999999999999 9998
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHHhC---CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHH
Q psy4974 149 LPKGRSFVPFQYIEEDVDIAYELLKLLG---VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEG 225 (345)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 225 (345)
...... ...++..+..+.+++.... .++|.|+||||||.+|+.+|...| +|+++|.+++.........
T Consensus 173 ~~~~~~---~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~~----- 243 (360)
T d2jbwa1 173 FEYKRI---AGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDL----- 243 (360)
T ss_dssp TTTCCS---CSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGGG-----
T ss_pred Cccccc---cccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHHhh-----
Confidence 644332 2245666777777766553 358999999999999999999887 6999999988665422110
Q ss_pred hHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHH
Q psy4974 226 MRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLL 305 (345)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~ 305 (345)
..+............. .... . ....... .+....+.+++||+|+++|++|. +|.+.++.+.
T Consensus 244 ------~~~~~~~~~~~~~~~~--~~~~----~---~~~~~~~---~~~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~ 304 (360)
T d2jbwa1 244 ------ETPLTKESWKYVSKVD--TLEE----A---RLHVHAA---LETRDVLSQIACPTYILHGVHDE-VPLSFVDTVL 304 (360)
T ss_dssp ------SCHHHHHHHHHHTTCS--SHHH----H---HHHHHHH---TCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHH
T ss_pred ------hhhhhhHHHHHhccCC--chHH----H---HHHHHhh---cchhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHH
Confidence 0111111111111111 0100 0 0011111 12244567889999999999998 5889999999
Q ss_pred hhcC--CcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 306 NQLK--FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 306 ~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+.++ +.+++++++++|..+ ..+.+....+.+||.+..
T Consensus 305 ~~~~~~~~~l~~~~~g~H~~~-~~~~~~~~~i~dWl~~~L 343 (360)
T d2jbwa1 305 ELVPAEHLNLVVEKDGDHCCH-NLGIRPRLEMADWLYDVL 343 (360)
T ss_dssp HHSCGGGEEEEEETTCCGGGG-GGTTHHHHHHHHHHHHHH
T ss_pred HhcCCCCeEEEEECCCCcCCC-cChHHHHHHHHHHHHHHh
Confidence 9886 457788899999654 567777788888887753
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.91 E-value=2e-22 Score=164.94 Aligned_cols=173 Identities=13% Similarity=-0.004 Sum_probs=127.2
Q ss_pred ceEEEEcCc---CCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 94 QVLFFTYGV---LGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 94 p~vv~lHG~---~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
+++|++|+. +++. ...+..+++.|+++||.|+.+|+|| +|.|...... .....+++..+.
T Consensus 36 ~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG-------------~G~S~g~~~~---~~~~~~D~~a~~ 99 (218)
T d2fuka1 36 VTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRS-------------VGTSAGSFDH---GDGEQDDLRAVA 99 (218)
T ss_dssp EEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTT-------------STTCCSCCCT---TTHHHHHHHHHH
T ss_pred cEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCC-------------CccCCCccCc---CcchHHHHHHHH
Confidence 356888843 3331 2446778899999999999999999 9999765332 112223333333
Q ss_pred HH-HHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCC
Q psy4974 170 EL-LKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDV 248 (345)
Q Consensus 170 ~~-l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (345)
++ .+..+.++++++||||||.+|+.+|.+. .++++|+++|+.... .
T Consensus 100 ~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~----------------------------~--- 146 (218)
T d2fuka1 100 EWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW----------------------------D--- 146 (218)
T ss_dssp HHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTB----------------------------C---
T ss_pred HHHhhcccCceEEEEEEcccchhhhhhhccc--ccceEEEeCCcccch----------------------------h---
Confidence 33 3344567999999999999999998874 488999999864310 0
Q ss_pred chhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-CcEEEEeCCCCCcccccC
Q psy4974 249 NYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-FCQYYQFSSGGHSCHIKH 327 (345)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~ 327 (345)
.....+.+|+|+|+|++|.++|.+..+++.+.++ ..++++++|++|++. .+
T Consensus 147 ---------------------------~~~~~~~~P~Lvi~G~~D~~vp~~~~~~l~~~~~~~~~l~~i~ga~H~f~-~~ 198 (218)
T d2fuka1 147 ---------------------------FSDVQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFH-RK 198 (218)
T ss_dssp ---------------------------CTTCCCCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCT-TC
T ss_pred ---------------------------hhccccccceeeEecCCCcCcCHHHHHHHHHHccCCceEEEeCCCCCCCC-CC
Confidence 0012457899999999999999999999988775 468999999999765 44
Q ss_pred hHHHHHHHHHHHHhhc
Q psy4974 328 GQVFNEISRNFILEEN 343 (345)
Q Consensus 328 ~~~~~~~i~~fl~~~~ 343 (345)
.+++.+.+.+|+++..
T Consensus 199 ~~~l~~~~~~~v~~~l 214 (218)
T d2fuka1 199 LIDLRGALQHGVRRWL 214 (218)
T ss_dssp HHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 5678999999998764
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.90 E-value=1.4e-23 Score=168.88 Aligned_cols=178 Identities=12% Similarity=0.034 Sum_probs=124.4
Q ss_pred eEEEEcCcCCCchhh-HHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEIRNS-FKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 95 ~vv~lHG~~~~~~~~-~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
.||++||+++++... +..+++.|+++||.|+++|+|| +|.+ .++++++.+....+
T Consensus 3 ~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~-------------~~~~-----------~~~~~~~~l~~~~~ 58 (186)
T d1uxoa_ 3 QVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPN-------------PLQP-----------RLEDWLDTLSLYQH 58 (186)
T ss_dssp EEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSC-------------TTSC-----------CHHHHHHHHHTTGG
T ss_pred EEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCC-------------CCcc-----------hHHHHHHHHHHHHh
Confidence 799999999985333 5678899999999999999999 8765 34455665555554
Q ss_pred HhCCccEEEEEeChhHHHHHHHHHhCCccc--ceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchh
Q psy4974 174 LLGVCKVSLFGWCDGGHLSFVFSMKYPHMV--HKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYI 251 (345)
Q Consensus 174 ~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v--~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (345)
.. .++++|+||||||.+++.++.++|+.. .+++...+......... .... .....
T Consensus 59 ~~-~~~~~lvGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~--------------~~~~~---- 115 (186)
T d1uxoa_ 59 TL-HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQ----MLDE--------------FTQGS---- 115 (186)
T ss_dssp GC-CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCG----GGGG--------------GTCSC----
T ss_pred cc-CCCcEEEEechhhHHHHHHHHhCCccceeeEEeecccccccchhhh----hhhh--------------hhccc----
Confidence 43 368999999999999999999998654 34444433322111100 0000 00000
Q ss_pred hhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCccccc---Ch
Q psy4974 252 TGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIK---HG 328 (345)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~ 328 (345)
.. .....++.+|+++++|++|.++|.+.++.+++.+ ++++++++++||+...+ .-
T Consensus 116 -~~--------------------~~~~~~~~~p~lvi~g~~D~~vp~~~~~~l~~~~-~~~~~~~~~~gH~~~~~~~~~~ 173 (186)
T d1uxoa_ 116 -FD--------------------HQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI-DAALYEVQHGGHFLEDEGFTSL 173 (186)
T ss_dssp -CC--------------------HHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-TCEEEEETTCTTSCGGGTCSCC
T ss_pred -cc--------------------ccccccCCCCEEEEecCCCCCCCHHHHHHHHHHc-CCEEEEeCCCCCcCccccCccc
Confidence 00 0001123579999999999999999999999987 78999999999987554 23
Q ss_pred HHHHHHHHHHHHh
Q psy4974 329 QVFNEISRNFILE 341 (345)
Q Consensus 329 ~~~~~~i~~fl~~ 341 (345)
.++.+.|.+||.+
T Consensus 174 ~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 174 PIVYDVLTSYFSK 186 (186)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcC
Confidence 5788999999864
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.90 E-value=4.7e-23 Score=171.05 Aligned_cols=212 Identities=13% Similarity=0.089 Sum_probs=130.3
Q ss_pred EEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHH
Q psy4974 86 FIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDV 165 (345)
Q Consensus 86 ~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~ 165 (345)
+...++.+++|||+||++++. ..|..+++.|. +|.|+++|++| +|.+ +
T Consensus 10 ~~~~~~~~~~l~~lhg~~g~~-~~~~~la~~L~--~~~v~~~~~~g-------------~~~~----------------a 57 (230)
T d1jmkc_ 10 TIMNQDQEQIIFAFPPVLGYG-LMYQNLSSRLP--SYKLCAFDFIE-------------EEDR----------------L 57 (230)
T ss_dssp EEESTTCSEEEEEECCTTCCG-GGGHHHHHHCT--TEEEEEECCCC-------------STTH----------------H
T ss_pred EeecCCCCCeEEEEcCCCCCH-HHHHHHHHHCC--CCEEeccCcCC-------------HHHH----------------H
Confidence 344444457999999999996 99999999995 49999999999 7532 3
Q ss_pred HHHHHHHHHh-CCccEEEEEeChhHHHHHHHHHhCCccccee---eEeccCCCCCchhHHHHHHhHhccCCChhhHHHHH
Q psy4974 166 DIAYELLKLL-GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKL---VIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVL 241 (345)
Q Consensus 166 ~~~~~~l~~~-~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~l---vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
+++.+.+.++ +.++++|+||||||.+|+.+|.++|+++..+ +.+++........... ...........
T Consensus 58 ~~~~~~i~~~~~~~~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 129 (230)
T d1jmkc_ 58 DRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDG--------RTVESDVEALM 129 (230)
T ss_dssp HHHHHHHHHHCCSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC----------------CCHHHHH
T ss_pred HHHHHHHHHhCCCCcEEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhh--------hhhhhhhhhhh
Confidence 3444444444 4568999999999999999999887655444 4444432211111000 00011111122
Q ss_pred HHcccCCchhhhhH-HHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc-CCcEEEEeCCC
Q psy4974 242 KAYDNDVNYITGIF-NQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL-KFCQYYQFSSG 319 (345)
Q Consensus 242 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~~~ 319 (345)
.............. ..........+... ........+++|+++|+|++|..++... ..+.+.. .+.++++++ +
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~p~l~i~g~~D~~~~~~~-~~w~~~~~~~~~~~~i~-g 204 (230)
T d1jmkc_ 130 NVNRDNEALNSEAVKHGLKQKTHAFYSYY---VNLISTGQVKADIDLLTSGADFDIPEWL-ASWEEATTGAYRMKRGF-G 204 (230)
T ss_dssp HHTTTCSGGGSHHHHHHHHHHHHHHHHHH---HHCCCCSCBSSEEEEEECSSCCCCCTTE-ECSGGGBSSCEEEEECS-S
T ss_pred hccccccccccHHHHHHHHHHHHHHHHhh---hcccccccccCcceeeeecCCcccchhH-HHHHHhccCCcEEEEEc-C
Confidence 22221110111111 11111111111111 1134456789999999999999888543 3344444 467888888 6
Q ss_pred CCcccccCh--HHHHHHHHHHHHhh
Q psy4974 320 GHSCHIKHG--QVFNEISRNFILEE 342 (345)
Q Consensus 320 gH~~~~~~~--~~~~~~i~~fl~~~ 342 (345)
||+.++++| +++++.|.+||+++
T Consensus 205 ~H~~ml~~~~~~~va~~I~~~L~~~ 229 (230)
T d1jmkc_ 205 THAEMLQGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp CGGGTTSHHHHHHHHHHHHHHHTCB
T ss_pred CChhhcCCccHHHHHHHHHHHHhhc
Confidence 999988766 89999999999875
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.90 E-value=4.7e-22 Score=166.01 Aligned_cols=215 Identities=14% Similarity=0.102 Sum_probs=139.6
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
.+.+++.|..+.+...++++|+||++||++++. ..|..+++.|++.||.|+++|+|| ||.|.....
T Consensus 5 ~~~~~l~g~~~~~~~p~~~~~~vl~lHG~~~~~-~~~~~~~~~la~~G~~V~~~D~~g-------------~g~s~~~~~ 70 (238)
T d1ufoa_ 5 TERLTLAGLSVLARIPEAPKALLLALHGLQGSK-EHILALLPGYAERGFLLLAFDAPR-------------HGEREGPPP 70 (238)
T ss_dssp EEEEEETTEEEEEEEESSCCEEEEEECCTTCCH-HHHHHTSTTTGGGTEEEEECCCTT-------------STTSSCCCC
T ss_pred EEEEEECCEEEEecCCCCCCeEEEEeCCCCCCH-HHHHHHHHHHHHCCCEEEEecCCC-------------CCCCccccc
Confidence 556788999998888877778999999999994 899999999999999999999999 998865443
Q ss_pred CCCCccc-hHHH-------HHHHHHHHH---HhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHH
Q psy4974 154 SFVPFQY-IEED-------VDIAYELLK---LLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRV 222 (345)
Q Consensus 154 ~~~~~~~-~~~~-------~~~~~~~l~---~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 222 (345)
.. .... .... .+++..++. ....+++.++|||+||.+++.++..+|+ +++++.+.+.........
T Consensus 71 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~-~~~~~~~~~~~~~~~~~~-- 146 (238)
T d1ufoa_ 71 SS-KSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFR-PRGVLAFIGSGFPMKLPQ-- 146 (238)
T ss_dssp CT-TSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCC-CSCEEEESCCSSCCCCCT--
T ss_pred cc-ccchhhhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcc-hhheeeeeeecccccccc--
Confidence 32 2211 1111 222222222 2234689999999999999999999885 555554443322111000
Q ss_pred HHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHH
Q psy4974 223 FEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQ 302 (345)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~ 302 (345)
...... ...... .. ...........++|+|+++|++|.++|.+.+.
T Consensus 147 --------~~~~~~-~~~~~~----------------------~~---~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~ 192 (238)
T d1ufoa_ 147 --------GQVVED-PGVLAL----------------------YQ---APPATRGEAYGGVPLLHLHGSRDHIVPLARME 192 (238)
T ss_dssp --------TCCCCC-HHHHHH----------------------HH---SCGGGCGGGGTTCCEEEEEETTCTTTTHHHHH
T ss_pred --------cccccc-ccccch----------------------hh---hhhhhhhhhhcCCCeEEEEcCCCCccCHHHHH
Confidence 000000 000000 00 00011112234689999999999999999998
Q ss_pred HHHhhcC------CcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 303 SLLNQLK------FCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 303 ~~~~~~~------~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
++.+.+. +.++..++|+||.+..+..++..+.+.+||+
T Consensus 193 ~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 193 KTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLE 236 (238)
T ss_dssp HHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCceEEEEEECCCCCccCHHHHHHHHHHHHHHhc
Confidence 8887652 4578889999998764444444445555554
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.90 E-value=2.1e-22 Score=172.79 Aligned_cols=216 Identities=14% Similarity=0.172 Sum_probs=147.7
Q ss_pred CCCceEEEEcCc--CCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 91 SGAQVLFFTYGV--LGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 91 ~~~p~vv~lHG~--~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
++.|++||+||+ +++. ..|..+++.|... ++|+++|+|| ||.++...... ...+++++++.+
T Consensus 58 ~~~~~l~c~~~~~~~g~~-~~y~~la~~L~~~-~~V~al~~pG-------------~~~~~~~~~~~-~~~s~~~~a~~~ 121 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGP-HEFLRLSTSFQEE-RDFLAVPLPG-------------YGTGTGTGTAL-LPADLDTALDAQ 121 (283)
T ss_dssp CCCCEEEEECCCCTTCST-TTTHHHHHTTTTT-CCEEEECCTT-------------CCBC---CBCC-EESSHHHHHHHH
T ss_pred CCCceEEEeCCCCCCCCH-HHHHHHHHhcCCC-ceEEEEeCCC-------------CCCCCCCcccc-ccCCHHHHHHHH
Confidence 455899999985 4554 8899999999987 9999999999 99987655433 445788888877
Q ss_pred HH-HHHHhCCccEEEEEeChhHHHHHHHHHhC----CcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHH
Q psy4974 169 YE-LLKLLGVCKVSLFGWCDGGHLSFVFSMKY----PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKA 243 (345)
Q Consensus 169 ~~-~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
.+ +++..+..+++|+||||||.+|+.+|.+. ++.|.+++++++............... ......
T Consensus 122 ~~~i~~~~~~~P~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~~~---------~~~~~~-- 190 (283)
T d2h7xa1 122 ARAILRAAGDAPVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQ---------LGEGLF-- 190 (283)
T ss_dssp HHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTHHH---------HHHHHH--
T ss_pred HHHHHHhcCCCceEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhhhh---------hHHHhh--
Confidence 64 66777888999999999999999999875 457999999998765443332221110 000000
Q ss_pred cccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC-cEEEEeCCCCCc
Q psy4974 244 YDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF-CQYYQFSSGGHS 322 (345)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~gH~ 322 (345)
... ........+........... ......+++|+++++|++|..++......+.+.+++ .+++.++ ++|+
T Consensus 191 -~~~---~~~~~~~~l~a~~~~~~~~~----~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~~~~~~~v~-G~H~ 261 (283)
T d2h7xa1 191 -AGE---LEPMSDARLLAMGRYARFLA----GPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVP-GDHF 261 (283)
T ss_dssp -HTC---SSCCCHHHHHHHHHHHHHHH----SCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSSCSEEEEES-SCTT
T ss_pred -ccc---ccccccHHHHHHHHHHHHHh----hccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEEc-CCCc
Confidence 000 00000111111111111111 223467899999999999999988777777776654 5888998 5898
Q ss_pred ccc-cChHHHHHHHHHHHHhh
Q psy4974 323 CHI-KHGQVFNEISRNFILEE 342 (345)
Q Consensus 323 ~~~-~~~~~~~~~i~~fl~~~ 342 (345)
.++ ++++.+++.|.+||++.
T Consensus 262 ~ml~e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 262 TMMRDHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp HHHHTTHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHhc
Confidence 665 67999999999999864
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.89 E-value=9.6e-23 Score=162.84 Aligned_cols=173 Identities=13% Similarity=0.094 Sum_probs=138.0
Q ss_pred ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLK 173 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~ 173 (345)
+||||+||++++. ..|..+++.|.++||.++.+|.+| ++.+... .....+.+++.+.++++
T Consensus 3 ~PVv~vHG~~~~~-~~~~~l~~~l~~~g~~~~~~~~~~-------------~~~~~~~-----~~~~~~~l~~~i~~~~~ 63 (179)
T d1ispa_ 3 NPVVMVHGIGGAS-FNFAGIKSYLVSQGWSRDKLYAVD-------------FWDKTGT-----NYNNGPVLSRFVQKVLD 63 (179)
T ss_dssp CCEEEECCTTCCG-GGGHHHHHHHHHTTCCGGGEEECC-------------CSCTTCC-----HHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCH-HHHHHHHHHHHHcCCeEEEEecCC-------------ccccccc-----cchhhhhHHHHHHHHHH
Confidence 5799999999995 999999999999999999999999 8877443 22245667788888899
Q ss_pred HhCCccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchh
Q psy4974 174 LLGVCKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYI 251 (345)
Q Consensus 174 ~~~~~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (345)
+.+.++++|+||||||.++..++.++ |++|+++|+++++....... .
T Consensus 64 ~~~~~~v~lvGHSmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~~---------------------------~---- 112 (179)
T d1ispa_ 64 ETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGK---------------------------A---- 112 (179)
T ss_dssp HHCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB---------------------------C----
T ss_pred hcCCceEEEEeecCcCHHHHHHHHHcCCchhhCEEEEECCCCCCchhh---------------------------h----
Confidence 99999999999999999999999876 67899999999864311000 0
Q ss_pred hhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCCCcccccChHHH
Q psy4974 252 TGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGGHSCHIKHGQVF 331 (345)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 331 (345)
.........+|++.++|..|.++++..+ .+++.+.+.+++.+|...+.+| ++
T Consensus 113 ----------------------l~~~~~~~~~~~~~i~~~~D~~v~~~~~-----~l~~~~~~~~~~~~H~~l~~~~-~v 164 (179)
T d1ispa_ 113 ----------------------LPGTDPNQKILYTSIYSSADMIVMNYLS-----RLDGARNVQIHGVGHIGLLYSS-QV 164 (179)
T ss_dssp ----------------------CCCSCTTCCCEEEEEEETTCSSSCHHHH-----CCBTSEEEEESSCCTGGGGGCH-HH
T ss_pred ----------------------cCCcccccCceEEEEEecCCcccCchhh-----cCCCceEEEECCCCchhhccCH-HH
Confidence 0111223467999999999999997543 4678888999999999888877 68
Q ss_pred HHHHHHHHHhhcc
Q psy4974 332 NEISRNFILEENK 344 (345)
Q Consensus 332 ~~~i~~fl~~~~k 344 (345)
.+.+.+||+...+
T Consensus 165 ~~~i~~~L~~~~~ 177 (179)
T d1ispa_ 165 NSLIKEGLNGGGQ 177 (179)
T ss_dssp HHHHHHHHTTTCB
T ss_pred HHHHHHHHhccCC
Confidence 8999999987654
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.88 E-value=3.1e-21 Score=169.61 Aligned_cols=252 Identities=17% Similarity=0.267 Sum_probs=167.5
Q ss_pred EEcCceEEEEEcCC----CCceEEEEcCcCCCch--hhHHHHH---HhhCCCCeEEEEeCCCCchhhhccCCccCCCCCC
Q psy4974 78 SIKGCDIRFIKYGS----GAQVLFFTYGVLGEIR--NSFKKQL---TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS 148 (345)
Q Consensus 78 ~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~--~~~~~~~---~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s 148 (345)
.+.+.+|.|..+|+ +.++||++|++.+++. .-|..++ ..|..+.|.||++|..| +++|.+
T Consensus 25 ~l~~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG-----------~~~gst 93 (376)
T d2vata1 25 ILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLG-----------SPFGSA 93 (376)
T ss_dssp EEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTT-----------CSSSSS
T ss_pred CcCCceEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCC-----------CCcCCC
Confidence 44668899999995 3368999999988842 3344443 34544459999999999 112211
Q ss_pred CC----C--------CCCCCCccchHHHHHHHHHHHHHhCCccEE-EEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 149 LP----K--------GRSFVPFQYIEEDVDIAYELLKLLGVCKVS-LFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 149 ~~----~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
.+ | ...| +.-++.++++.-..+++++|++++. ++|.||||+.|+++|..+|++|+++|.+++....
T Consensus 94 ~p~s~~p~~~~~~~yg~~F-P~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~ 172 (376)
T d2vata1 94 GPCSPDPDAEGQRPYGAKF-PRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQ 172 (376)
T ss_dssp STTSBCTTTC--CBCGGGC-CCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBC
T ss_pred CCCCCCcccccCCcccccC-CcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchHHHhhhccccccccc
Confidence 11 1 0123 4457889999988999999999985 8899999999999999999999999999988776
Q ss_pred CchhHHHHHHhHh----ccCCC---------h--hh-------------HHHHHHHcccCCc------h-----------
Q psy4974 216 TIDNVRVFEGMRR----LSNWS---------P--MA-------------RSEVLKAYDNDVN------Y----------- 250 (345)
Q Consensus 216 ~~~~~~~~~~~~~----~~~~~---------~--~~-------------~~~~~~~~~~~~~------~----------- 250 (345)
...........+. -..|. + .+ ...+...+..... .
T Consensus 173 s~~~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~ 252 (376)
T d2vata1 173 SGWCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEING 252 (376)
T ss_dssp CHHHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC----------------
T ss_pred chHHHHHHHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhcccc
Confidence 5543332221111 11110 0 00 0111111111000 0
Q ss_pred -----------hhhhHHHHHH-------------HHHHHHHhhCc--------hhhhccCCCCCCCEEEEEeCCCCCCCh
Q psy4974 251 -----------ITGIFNQYVD-------------MVNLIFKSYGR--------NVYQELLPYVDVPVLVFHSADDVMVST 298 (345)
Q Consensus 251 -----------~~~~~~~~~~-------------~~~~~~~~~~~--------~~~~~~l~~i~~Pvl~i~G~~D~~v~~ 298 (345)
.....+.++. .+..+.+.... .++.+.+..|++|+|+|.++.|.++|+
T Consensus 253 ~~~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp 332 (376)
T d2vata1 253 TDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSF 332 (376)
T ss_dssp -----------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCH
T ss_pred cccccccccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCH
Confidence 0001112211 11111111111 134555889999999999999999999
Q ss_pred HHHHHHHhhcCCcEEEEeC-CCCCcccccChHHHHHHHHHHHHh
Q psy4974 299 QQVQSLLNQLKFCQYYQFS-SGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+..+++++.++++++.+++ ..||..++.+++.+.+.|.+||++
T Consensus 333 ~~~~e~a~~l~~a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 333 DEHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp HHHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCCeEEEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 9999999999999999998 579998888899999999999974
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=2.7e-20 Score=161.65 Aligned_cols=228 Identities=14% Similarity=0.039 Sum_probs=141.8
Q ss_pred EcCceEEEEE---cCCCC-ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC
Q psy4974 79 IKGCDIRFIK---YGSGA-QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS 154 (345)
Q Consensus 79 ~~g~~l~~~~---~g~~~-p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~ 154 (345)
.+|..|+... .+.++ |+||++||++++. ..|...+..|+++||.|+++|+|| +|.|..+...
T Consensus 64 ~dg~~i~~~l~~P~~~~~~P~vv~~HG~~~~~-~~~~~~~~~la~~Gy~vi~~D~rG-------------~G~s~~~~~~ 129 (318)
T d1l7aa_ 64 FGNARITGWYAVPDKEGPHPAIVKYHGYNASY-DGEIHEMVNWALHGYATFGMLVRG-------------QQRSEDTSIS 129 (318)
T ss_dssp GGGEEEEEEEEEESSCSCEEEEEEECCTTCCS-GGGHHHHHHHHHTTCEEEEECCTT-------------TSSSCCCCCC
T ss_pred CCCcEEEEEEEecCCCCCceEEEEecCCCCCc-cchHHHHHHHHHCCCEEEEEeeCC-------------CCCCCCCccc
Confidence 3787776432 33333 7999999999995 889999999999999999999999 9988654322
Q ss_pred CCCcc---------------chHHHHHHHH---HHHHHhC---CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCC
Q psy4974 155 FVPFQ---------------YIEEDVDIAY---ELLKLLG---VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKS 213 (345)
Q Consensus 155 ~~~~~---------------~~~~~~~~~~---~~l~~~~---~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 213 (345)
. ... .....+.+.. +++.... ..++.++|+|+||..++..+...+ ++++++...+..
T Consensus 130 ~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~-~~~~~~~~~~~~ 207 (318)
T d1l7aa_ 130 P-HGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSD-IPKAAVADYPYL 207 (318)
T ss_dssp S-SCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCS-CCSEEEEESCCS
T ss_pred c-hhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCc-ccceEEEecccc
Confidence 1 100 1112222222 2333332 236899999999999999998886 467776665543
Q ss_pred CCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCC
Q psy4974 214 FLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADD 293 (345)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D 293 (345)
.... .. ...................... ..... .+...........+.++++|+|+++|++|
T Consensus 208 ~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~--------~~~~~----~~~~~~~~~~~~~~~~i~~P~Lii~G~~D 269 (318)
T d1l7aa_ 208 SNFE---RA---IDVALEQPYLEINSFFRRNGSP--------ETEVQ----AMKTLSYFDIMNLADRVKVPVLMSIGLID 269 (318)
T ss_dssp CCHH---HH---HHHCCSTTTTHHHHHHHHSCCH--------HHHHH----HHHHHHTTCHHHHGGGCCSCEEEEEETTC
T ss_pred ccHH---HH---hhcccccccchhhhhhhccccc--------ccccc----ccccccccccccccccCCCCEEEEEECCC
Confidence 3210 00 0000110001111111100000 00000 00111111223345678999999999999
Q ss_pred CCCChHHHHHHHhhcC-CcEEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 294 VMVSTQQVQSLLNQLK-FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 294 ~~v~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
.++|++.+..+.+.++ +.++++++++||.. ++++.+.+.+||+++.|
T Consensus 270 ~~vp~~~~~~~~~~l~~~~~l~~~~~~gH~~----~~~~~~~~~~fl~~~Lk 317 (318)
T d1l7aa_ 270 KVTPPSTVFAAYNHLETKKELKVYRYFGHEY----IPAFQTEKLAFFKQILK 317 (318)
T ss_dssp SSSCHHHHHHHHHHCCSSEEEEEETTCCSSC----CHHHHHHHHHHHHHHHC
T ss_pred CCcCHHHHHHHHHHcCCCcEEEEECCCCCCC----cHHHHHHHHHHHHHhCC
Confidence 9999999999999886 57899999999965 45666777788887765
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.87 E-value=2.5e-21 Score=164.03 Aligned_cols=225 Identities=11% Similarity=0.039 Sum_probs=143.3
Q ss_pred EEcCceEEEEEc---C-CC-CceEEEEcCcCCC-chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 78 SIKGCDIRFIKY---G-SG-AQVLFFTYGVLGE-IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 78 ~~~g~~l~~~~~---g-~~-~p~vv~lHG~~~~-~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
+.||.+|..... . ++ .|+||++||++.. ....|...+..|+++||.|+++|+|+ ++.+...
T Consensus 19 s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~-------------~~~~g~~ 85 (260)
T d2hu7a2 19 SFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRG-------------STGYGEE 85 (260)
T ss_dssp CTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTT-------------CSSSCHH
T ss_pred CCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeee-------------ccccccc
Confidence 337877764432 2 22 2689999985332 23667778888999999999999999 7655321
Q ss_pred C-----CCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHh
Q psy4974 152 G-----RSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGM 226 (345)
Q Consensus 152 ~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 226 (345)
. ..+ ....+.+....+..+.+....+++.++|+|+||.+++.++..+|+.+++++..++........
T Consensus 86 ~~~~~~~~~-~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~------- 157 (260)
T d2hu7a2 86 WRLKIIGDP-CGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMY------- 157 (260)
T ss_dssp HHHTTTTCT-TTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHHHH-------
T ss_pred ccccccccc-chhhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhhhhhh-------
Confidence 1 111 111122222222222333334689999999999999999999999999999888865421100
Q ss_pred HhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHh
Q psy4974 227 RRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLN 306 (345)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~ 306 (345)
. ................. ...+.. ......+.++++|+|+++|++|.++|.+.+..+.+
T Consensus 158 -~--~~~~~~~~~~~~~~~~~---------------~~~~~~---~~~~~~~~~~~~P~liihG~~D~~vp~~~~~~~~~ 216 (260)
T d2hu7a2 158 -E--LSDAAFRNFIEQLTGGS---------------REIMRS---RSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMG 216 (260)
T ss_dssp -H--TCCHHHHHHHHHHHCSC---------------HHHHHH---TCGGGCGGGCCSCEEEEEETTCSSSCSHHHHHHHH
T ss_pred -c--ccccccccccccccccc---------------cccccc---cchhhcccccCCCceeeecccCceecHHHHHHHHH
Confidence 0 00011111111111100 011111 12244456788999999999999999999888877
Q ss_pred hc----CCcEEEEeCCCCCcccc-cChHHHHHHHHHHHHhhcc
Q psy4974 307 QL----KFCQYYQFSSGGHSCHI-KHGQVFNEISRNFILEENK 344 (345)
Q Consensus 307 ~~----~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~k 344 (345)
.+ ..+++++++++||.+.. ++..++.+.+.+||.++.|
T Consensus 217 ~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl~~hl~ 259 (260)
T d2hu7a2 217 ELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQRE 259 (260)
T ss_dssp HHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHHHHHHHHhc
Confidence 65 35689999999997644 6677888899999998865
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=9.7e-22 Score=167.03 Aligned_cols=108 Identities=8% Similarity=0.029 Sum_probs=81.1
Q ss_pred EEEcCceEEEEEcCC-CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC
Q psy4974 77 FSIKGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF 155 (345)
Q Consensus 77 ~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~ 155 (345)
+..+|..|.+...++ .++||||+||+++++ ..|..+++.| +++|+++|+|| +|.++
T Consensus 8 ~~~~~~~l~~l~~~~~~~~Pl~l~Hg~~gs~-~~~~~l~~~L---~~~v~~~d~~g-------------~~~~~------ 64 (286)
T d1xkta_ 8 VNPEGPTLMRLNSVQSSERPLFLVHPIEGST-TVFHSLASRL---SIPTYGLQCTR-------------AAPLD------ 64 (286)
T ss_dssp CCTTSCSEEECCCCCCCSCCEEEECCTTCCC-GGGHHHHHTC---SSCEEEECCCT-------------TSCCS------
T ss_pred cCCCCCEEEEecCCCCCCCeEEEECCCCccH-HHHHHHHHHc---CCeEEEEeCCC-------------CCCCC------
Confidence 344666666666543 346899999999996 9999999988 38999999999 98762
Q ss_pred CCccchHHHHHHHH-HHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEecc
Q psy4974 156 VPFQYIEEDVDIAY-ELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGT 211 (345)
Q Consensus 156 ~~~~~~~~~~~~~~-~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 211 (345)
++++.++++. ++.+..+.++++|+||||||.+|+.+|.++|+++.++++++.
T Consensus 65 ----~~~~~a~~~~~~~~~~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~~ 117 (286)
T d1xkta_ 65 ----SIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNS 117 (286)
T ss_dssp ----CHHHHHHHHHHHHHHHCCSSCCEEEEETHHHHHHHHHHHHHHHC------CCE
T ss_pred ----CHHHHHHHHHHHHHHhcCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEEE
Confidence 4566676665 455556778999999999999999999999999888776653
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.85 E-value=8.3e-20 Score=159.33 Aligned_cols=251 Identities=16% Similarity=0.278 Sum_probs=166.5
Q ss_pred EEEcCceEEEEEcCC----CCceEEEEcCcCCCchh--------hHHHHH---HhhCCCCeEEEEeCCCCchhhhccCCc
Q psy4974 77 FSIKGCDIRFIKYGS----GAQVLFFTYGVLGEIRN--------SFKKQL---TAFDPKLFTSIFWDPPGNVVLYLLGKT 141 (345)
Q Consensus 77 ~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~--------~~~~~~---~~L~~~G~~vi~~D~~G~~~~~~~g~~ 141 (345)
..+.+.+|.|..+|+ +.++||++|++.++... -|..++ ..|..+.|.||++|..|
T Consensus 19 ~~l~~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG---------- 88 (357)
T d2b61a1 19 GKLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLG---------- 88 (357)
T ss_dssp CEECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTT----------
T ss_pred CccCCceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccC----------
Confidence 356778999999985 33699999999987411 245554 34544459999999999
Q ss_pred cCCCCCCC-CCC-----------CCCCCccchHHHHHHHHHHHHHhCCccEE-EEEeChhHHHHHHHHHhCCcccceeeE
Q psy4974 142 CSGYGQSL-PKG-----------RSFVPFQYIEEDVDIAYELLKLLGVCKVS-LFGWCDGGHLSFVFSMKYPHMVHKLVI 208 (345)
Q Consensus 142 ~~~~G~s~-~~~-----------~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl 208 (345)
.|.++ .+. ..| +.-++.++++....+++++|++++. ++|.||||+.|+++|..+|+.|+++|.
T Consensus 89 ---~~~gSs~p~s~~p~tg~~~g~~F-P~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~ 164 (357)
T d2b61a1 89 ---GCKGTTGPSSINPQTGKPYGSQF-PNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVN 164 (357)
T ss_dssp ---CSSSSSCTTSBCTTTSSBCGGGC-CCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEE
T ss_pred ---CccccCCcCCCCCCCCCCCCccc-ccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhHHHhhhcc
Confidence 43321 111 124 4457889999999999999999995 789999999999999999999999999
Q ss_pred eccCCCCCchhHHHHHHhH----hccCCC---------hh--h---H----------HHHHHHcccCC----chhh--hh
Q psy4974 209 WGTKSFLTIDNVRVFEGMR----RLSNWS---------PM--A---R----------SEVLKAYDNDV----NYIT--GI 254 (345)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~----~~~~~~---------~~--~---~----------~~~~~~~~~~~----~~~~--~~ 254 (345)
+++...............+ .-..|. +. . + ..+...+.... .... ..
T Consensus 165 i~~~a~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~ 244 (357)
T d2b61a1 165 LCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQ 244 (357)
T ss_dssp ESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBH
T ss_pred cccccccchhHHHHHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhh
Confidence 9988765554433322221 111111 00 0 0 01111121110 0000 00
Q ss_pred HHHHHHH-------------HHHHHHhh-------CchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----C
Q psy4974 255 FNQYVDM-------------VNLIFKSY-------GRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----F 310 (345)
Q Consensus 255 ~~~~~~~-------------~~~~~~~~-------~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~ 310 (345)
.+.++.. +..+.+.. ...+..+.+++|++|+|+|..+.|.++|++..+.+++.++ +
T Consensus 245 vesyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~ 324 (357)
T d2b61a1 245 VESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVD 324 (357)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCC
Confidence 1222211 11111111 1123456688999999999999999999998888888774 4
Q ss_pred cEEEEeCC-CCCcccccChHHHHHHHHHHHHh
Q psy4974 311 CQYYQFSS-GGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 311 ~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+++++++. .||..++.+.+++.+.|.+||+.
T Consensus 325 v~~~~I~S~~GHdafL~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 325 LHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 356 (357)
T ss_dssp EEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCccccCcCHHHHHHHHHHHHcc
Confidence 58888885 49999888899999999999975
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.83 E-value=1.2e-19 Score=153.44 Aligned_cols=180 Identities=12% Similarity=0.094 Sum_probs=130.6
Q ss_pred ceEEEEEc-CCCC-ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCcc
Q psy4974 82 CDIRFIKY-GSGA-QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQ 159 (345)
Q Consensus 82 ~~l~~~~~-g~~~-p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~ 159 (345)
..|+|-.. ++++ |.||++||++++ ...+..+++.|+++||.|+++|++| ++.. ...
T Consensus 39 ~~ly~P~~~~~g~~P~Vv~~HG~~g~-~~~~~~~a~~lA~~Gy~V~~~d~~~-------------~~~~--------~~~ 96 (260)
T d1jfra_ 39 GTIYYPTSTADGTFGAVVISPGFTAY-QSSIAWLGPRLASQGFVVFTIDTNT-------------TLDQ--------PDS 96 (260)
T ss_dssp EEEEEESCCTTCCEEEEEEECCTTCC-GGGTTTHHHHHHTTTCEEEEECCSS-------------TTCC--------HHH
T ss_pred EEEEEcCCCCCCCccEEEEECCCCCC-HHHHHHHHHHHHhCCCEEEEEeeCC-------------CcCC--------chh
Confidence 35666432 3444 789999999999 4888999999999999999999999 6443 111
Q ss_pred chHHHHHHHHHHHHH------hCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCC
Q psy4974 160 YIEEDVDIAYELLKL------LGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWS 233 (345)
Q Consensus 160 ~~~~~~~~~~~~l~~------~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (345)
...+..+.+..+.+. ++.++|.++|||+||.+++.++...+ +++++|.+++...
T Consensus 97 ~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~------------------- 156 (260)
T d1jfra_ 97 RGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNT------------------- 156 (260)
T ss_dssp HHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCS-------------------
T ss_pred hHHHHHHHHHHHHhhhhhhccccccceEEEeccccchHHHHHHhhhc-cchhheeeecccc-------------------
Confidence 112222222222221 23358999999999999999998876 6888888777533
Q ss_pred hhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHH-HHHHHhhcC---
Q psy4974 234 PMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQ-VQSLLNQLK--- 309 (345)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~-~~~~~~~~~--- 309 (345)
...+.++++|+|+++|++|.++|.+. .+.+.+.++
T Consensus 157 -----------------------------------------~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~ 195 (260)
T d1jfra_ 157 -----------------------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSL 195 (260)
T ss_dssp -----------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTS
T ss_pred -----------------------------------------cccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCC
Confidence 11234678999999999999999764 555555553
Q ss_pred CcEEEEeCCCCCcccccChHHHHHHHHHHHHhhcc
Q psy4974 310 FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEENK 344 (345)
Q Consensus 310 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~k 344 (345)
..+++++++++|.........+.+.+..||+...+
T Consensus 196 ~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~~~L~ 230 (260)
T d1jfra_ 196 DKAYLELRGASHFTPNTSDTTIAKYSISWLKRFID 230 (260)
T ss_dssp CEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHS
T ss_pred CEEEEEECCCccCCCCCChHHHHHHHHHHHHHHhc
Confidence 35789999999998777677888888999986643
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.82 E-value=1.5e-19 Score=158.00 Aligned_cols=249 Identities=18% Similarity=0.302 Sum_probs=165.8
Q ss_pred EEcCceEEEEEcCC----CCceEEEEcCcCCCch------------hhHHHHH---HhhCCCCeEEEEeCCCCchhhhcc
Q psy4974 78 SIKGCDIRFIKYGS----GAQVLFFTYGVLGEIR------------NSFKKQL---TAFDPKLFTSIFWDPPGNVVLYLL 138 (345)
Q Consensus 78 ~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~------------~~~~~~~---~~L~~~G~~vi~~D~~G~~~~~~~ 138 (345)
.+.+.+|.|..+|. +.++||++|++.++.. ..|..++ ..|..+-|.||++|..|
T Consensus 23 ~l~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG------- 95 (362)
T d2pl5a1 23 VLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIG------- 95 (362)
T ss_dssp EESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTT-------
T ss_pred CcCCceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeecccc-------
Confidence 45778999999884 3368999999988731 2344444 33444459999999999
Q ss_pred CCccCCCCCCCCCC------------CCCCCccchHHHHHHHHHHHHHhCCccEE-EEEeChhHHHHHHHHHhCCcccce
Q psy4974 139 GKTCSGYGQSLPKG------------RSFVPFQYIEEDVDIAYELLKLLGVCKVS-LFGWCDGGHLSFVFSMKYPHMVHK 205 (345)
Q Consensus 139 g~~~~~~G~s~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-lvGhS~Gg~ia~~~a~~~p~~v~~ 205 (345)
.|.++.+. ..| +.-++.+++.....+++++|++++. ++|.||||+.|+++|..+|+.|++
T Consensus 96 ------~~~~ss~~~s~~p~~~~~yg~~f-P~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~~ 168 (362)
T d2pl5a1 96 ------GCKGSSGPLSIHPETSTPYGSRF-PFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSN 168 (362)
T ss_dssp ------CSSSSSSTTSBCTTTSSBCGGGS-CCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEE
T ss_pred ------CcccccCccccccccccccCcCC-ccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCchHhhh
Confidence 54432211 123 3446788888888999999999988 789999999999999999999999
Q ss_pred eeEeccCCCCCchhHHHHHHhHh----ccCCC--------hh--h-------------HHHHHHHcccCC----------
Q psy4974 206 LVIWGTKSFLTIDNVRVFEGMRR----LSNWS--------PM--A-------------RSEVLKAYDNDV---------- 248 (345)
Q Consensus 206 lvl~~~~~~~~~~~~~~~~~~~~----~~~~~--------~~--~-------------~~~~~~~~~~~~---------- 248 (345)
+|.+++............+..+. -..|. +. + ...+...+....
T Consensus 169 ~v~ia~sa~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~ 248 (362)
T d2pl5a1 169 CIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDF 248 (362)
T ss_dssp EEEESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTT
T ss_pred hcccccccccCHHHHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhH
Confidence 99999877765544333322211 11111 00 0 011111111110
Q ss_pred ---chhhh---------hHHHHHHHHHHHHHhhC---chhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCC---
Q psy4974 249 ---NYITG---------IFNQYVDMVNLIFKSYG---RNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKF--- 310 (345)
Q Consensus 249 ---~~~~~---------~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~--- 310 (345)
.++.. ....++. +...+...+ ..+..+.+.+|++|+|+|..+.|.++|++..+.+++.+++
T Consensus 249 ~ve~yl~~~g~k~~~rfDan~yl~-l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~ 327 (362)
T d2pl5a1 249 AVGSYLIYQGESFVDRFDANSYIY-VTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADK 327 (362)
T ss_dssp TSCGGGGSTTCCSSSCCCHHHHHH-HHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHH-HHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCC
Confidence 00000 0011111 111222211 2234566899999999999999999999999999998863
Q ss_pred -cEEEEeC-CCCCcccccChHHHHHHHHHHHHh
Q psy4974 311 -CQYYQFS-SGGHSCHIKHGQVFNEISRNFILE 341 (345)
Q Consensus 311 -~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 341 (345)
+++++++ ..||..++.+.+++.+.|.+||+.
T Consensus 328 ~v~~~eI~S~~GHdaFL~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 328 RVFYVELQSGEGHDSFLLKNPKQIEILKGFLEN 360 (362)
T ss_dssp CEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHC
T ss_pred CeEEEEeCCCCCcchhccCHHHHHHHHHHHHcC
Confidence 4677775 469999999999999999999974
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=1.4e-18 Score=144.03 Aligned_cols=195 Identities=13% Similarity=0.047 Sum_probs=127.1
Q ss_pred CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCcc-CCCCCCCC-CCCCCCCccchHHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTC-SGYGQSLP-KGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~-~~~G~s~~-~~~~~~~~~~~~~~~~~~ 168 (345)
+..++||++||++++. ..|..++..+...++.+++++-|......-.+... +.+..... ..... +...+.+.++.+
T Consensus 19 ~~~~~VI~lHG~G~~~-~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~-~~~~i~~~~~~l 96 (229)
T d1fj2a_ 19 KATAAVIFLHGLGDTG-HGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQE-DESGIKQAAENI 96 (229)
T ss_dssp CCSEEEEEECCSSSCH-HHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCB-CHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCH-HHHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchh-hhHHHHHHHHHH
Confidence 3346899999999995 88999998888888999999876521111111100 00111110 11111 222344445555
Q ss_pred HHHHHHh-----CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHH
Q psy4974 169 YELLKLL-----GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKA 243 (345)
Q Consensus 169 ~~~l~~~-----~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
..+++.. ..++++++|+|+||.+|+.++.++|+++.+++.+++........
T Consensus 97 ~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~~------------------------ 152 (229)
T d1fj2a_ 97 KALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF------------------------ 152 (229)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS------------------------
T ss_pred HHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccccccccccc------------------------
Confidence 5554432 34589999999999999999999999999999998754311000
Q ss_pred cccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc------CCcEEEEeC
Q psy4974 244 YDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL------KFCQYYQFS 317 (345)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~------~~~~~~~~~ 317 (345)
... .......++|++++||++|.++|.+.+++..+.+ .++++++++
T Consensus 153 -~~~---------------------------~~~~~~~~~Pvli~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~ 204 (229)
T d1fj2a_ 153 -PQG---------------------------PIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYE 204 (229)
T ss_dssp -CSS---------------------------CCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEET
T ss_pred -ccc---------------------------ccccccccCceeEEEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeC
Confidence 000 1111234689999999999999998887765544 256888999
Q ss_pred CCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 318 SGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 318 ~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
++||.+. + +..+.+.+||+++.
T Consensus 205 g~gH~i~---~-~~~~~~~~wL~~~L 226 (229)
T d1fj2a_ 205 GMMHSSC---Q-QEMMDVKQFIDKLL 226 (229)
T ss_dssp TCCSSCC---H-HHHHHHHHHHHHHS
T ss_pred CCCCccC---H-HHHHHHHHHHHhHC
Confidence 9999764 3 33466888998764
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.81 E-value=6.2e-20 Score=134.80 Aligned_cols=99 Identities=15% Similarity=0.187 Sum_probs=85.2
Q ss_pred eeeEEEcCceEEEEEcCCCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 74 EGFFSIKGCDIRFIKYGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
..|++++|.+++|.+.|+++ ||||+||. ...| .+.|++ +|+|+++|+|| ||.|+.+
T Consensus 3 ~~~~~~~G~~l~y~~~G~G~-pvlllHG~----~~~w---~~~L~~-~yrvi~~DlpG-------------~G~S~~p-- 58 (122)
T d2dsta1 3 AGYLHLYGLNLVFDRVGKGP-PVLLVAEE----ASRW---PEALPE-GYAFYLLDLPG-------------YGRTEGP-- 58 (122)
T ss_dssp EEEEEETTEEEEEEEECCSS-EEEEESSS----GGGC---CSCCCT-TSEEEEECCTT-------------STTCCCC--
T ss_pred ceEEEECCEEEEEEEEcCCC-cEEEEecc----cccc---cccccC-CeEEEEEeccc-------------cCCCCCc--
Confidence 67899999999999999885 89999984 2444 345665 59999999999 9999754
Q ss_pred CCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC
Q psy4974 154 SFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP 200 (345)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p 200 (345)
.+ +.+++++++.++++.+++++++++||||||.+++++++..+
T Consensus 59 ~~----s~~~~a~~i~~ll~~L~i~~~~viG~S~Gg~ia~~laa~~~ 101 (122)
T d2dsta1 59 RM----APEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGL 101 (122)
T ss_dssp CC----CHHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTC
T ss_pred cc----ccchhHHHHHHHHHHhCCCCcEEEEeCccHHHHHHHHhhcc
Confidence 33 67888999999999999999999999999999999998754
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.80 E-value=8.8e-19 Score=147.54 Aligned_cols=209 Identities=11% Similarity=0.120 Sum_probs=136.2
Q ss_pred EcCCCCceEEEEcCc--CCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHH
Q psy4974 88 KYGSGAQVLFFTYGV--LGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDV 165 (345)
Q Consensus 88 ~~g~~~p~vv~lHG~--~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~ 165 (345)
..|.+.|+|+|+||. +++. ..|..++..|... +.|+++|+|| +|.++... .++++++
T Consensus 37 ~~g~~~~~l~c~~~~~~gg~~-~~y~~La~~L~~~-~~V~al~~pG-------------~~~~e~~~------~s~~~~a 95 (255)
T d1mo2a_ 37 ADGPGEVTVICCAGTAAISGP-HEFTRLAGALRGI-APVRAVPQPG-------------YEEGEPLP------SSMAAVA 95 (255)
T ss_dssp ECCSCSSEEEEECCCSSSCSG-GGGHHHHHHHTTT-CCEEEECCTT-------------SSTTCCEE------SSHHHHH
T ss_pred cCCCCCCeEEEECCCCCCCCH-HHHHHHHHhcCCC-ceEEEEeCCC-------------cCCCCCCC------CCHHHHH
Confidence 345566799999983 4664 8999999999987 9999999999 98774332 2678888
Q ss_pred HHHHHHH-HHhCCccEEEEEeChhHHHHHHHHHhCC---cccceeeEeccCCCCCchhHHHH-HHhHhccCCChhhHHHH
Q psy4974 166 DIAYELL-KLLGVCKVSLFGWCDGGHLSFVFSMKYP---HMVHKLVIWGTKSFLTIDNVRVF-EGMRRLSNWSPMARSEV 240 (345)
Q Consensus 166 ~~~~~~l-~~~~~~~i~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 240 (345)
+.+.+.+ +..+..+++|+||||||.+|+.+|.+.+ +.+..++++++............ ..+..
T Consensus 96 ~~~~~~i~~~~~~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~~~~~~~~~~~------------ 163 (255)
T d1mo2a_ 96 AVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTA------------ 163 (255)
T ss_dssp HHHHHHHHHTTSSSCEEEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHHHHHHHHHHHT------------
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccchhhHHHHHHH------------
Confidence 8887655 4456679999999999999999998754 45899999998655332221111 11100
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-CcEEEEeCCC
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-FCQYYQFSSG 319 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~ 319 (345)
..... .........+..+...++... ......+++|++++.+++|...... ..+..... ..+++.++ +
T Consensus 164 --~~~~~--~~~~~~~~~l~a~~~~~~~~~----~~~~~~~~~p~l~v~a~~~~~~~~~--~~w~~~~~~~~~~~~v~-G 232 (255)
T d1mo2a_ 164 --TLFDR--ETVRMDDTRLTALGAYDRLTG----QWRPRETGLPTLLVSAGEPMGPWPD--DSWKPTWPFEHDTVAVP-G 232 (255)
T ss_dssp --TCC------CCCCHHHHHHHHHHHHHHH----HCCCCCCCCCEEEEECCSSSSCCTT--CCCCCCCCSSCEEEECC-S
T ss_pred --Hhhcc--ccccCCHHHHHHHHHHHHHHh----cCCCccccceEEEeecCCCCCcchh--hHHHHhCCCCcEEEEEC-C
Confidence 00000 011111111222222222111 1123567899999999888544322 23334333 57888898 6
Q ss_pred CCcccc-cChHHHHHHHHHHHH
Q psy4974 320 GHSCHI-KHGQVFNEISRNFIL 340 (345)
Q Consensus 320 gH~~~~-~~~~~~~~~i~~fl~ 340 (345)
+|+.++ ++++++++.|.+||.
T Consensus 233 ~H~~ml~~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 233 DHFTMVQEHADAIARHIDAWLG 254 (255)
T ss_dssp CCSSCSSCCHHHHHHHHHHHHT
T ss_pred CCcccccccHHHHHHHHHHHhC
Confidence 998555 679999999999985
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.79 E-value=3.2e-18 Score=144.37 Aligned_cols=222 Identities=14% Similarity=0.081 Sum_probs=136.4
Q ss_pred eeeEEEcCceEEEEEc-----CCC-C-ceEEEEcCcCCC----chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCcc
Q psy4974 74 EGFFSIKGCDIRFIKY-----GSG-A-QVLFFTYGVLGE----IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTC 142 (345)
Q Consensus 74 ~~~~~~~g~~l~~~~~-----g~~-~-p~vv~lHG~~~~----~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~ 142 (345)
..++..||.+++|... .++ + |+||++||+++. ....+......++++||.|+.+|+||
T Consensus 6 ~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg----------- 74 (258)
T d2bgra2 6 LDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRG----------- 74 (258)
T ss_dssp EEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTT-----------
T ss_pred EEEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccc-----------
Confidence 5667779999999764 122 2 789999995222 11222233445678899999999999
Q ss_pred CCCCCCCC-----CCCCCCCccchHHHHHHHHHHHHHhC----C--ccEEEEEeChhHHHHHHHHHhCCcccceeeEecc
Q psy4974 143 SGYGQSLP-----KGRSFVPFQYIEEDVDIAYELLKLLG----V--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGT 211 (345)
Q Consensus 143 ~~~G~s~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~----~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 211 (345)
.+.... ....+ .. ...+++.++++.+. + +++.++|+|+||.+++.++..+|+.+...+..++
T Consensus 75 --~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~ 147 (258)
T d2bgra2 75 --SGYQGDKIMHAINRRL-GT----FEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAP 147 (258)
T ss_dssp --CSSSCHHHHGGGTTCT-TS----HHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESC
T ss_pred --cCCcchHHHHhhhhhh-hh----HHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeec
Confidence 654321 11111 11 12333333444332 2 3799999999999999999999988877777666
Q ss_pred CCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCC-CCCEEEEEe
Q psy4974 212 KSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYV-DVPVLVFHS 290 (345)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvl~i~G 290 (345)
.................... ...... ....... .....++ ++|++++||
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~--------~~~~~~~---~~~~~~~~~~P~li~hG 197 (258)
T d2bgra2 148 VSRWEYYDSVYTERYMGLPT-------------------PEDNLD--------HYRNSTV---MSRAENFKQVEYLLIHG 197 (258)
T ss_dssp CCCGGGSBHHHHHHHHCCCS-------------------TTTTHH--------HHHHSCS---GGGGGGGGGSEEEEEEE
T ss_pred ccccccccccccchhccccc-------------------chhhHH--------Hhhcccc---cccccccccCChheeee
Confidence 54432211111111000000 000000 0001111 1112222 379999999
Q ss_pred CCCCCCChHHHHHHHhhc----CCcEEEEeCCCCCcccc-cChHHHHHHHHHHHHhhc
Q psy4974 291 ADDVMVSTQQVQSLLNQL----KFCQYYQFSSGGHSCHI-KHGQVFNEISRNFILEEN 343 (345)
Q Consensus 291 ~~D~~v~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~ 343 (345)
++|..||...++++.+.+ .+++++++++++|.+.. +..+++.+.+.+||+++.
T Consensus 198 ~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~~fl~~~l 255 (258)
T d2bgra2 198 TADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCF 255 (258)
T ss_dssp TTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHHHHHHHHh
Confidence 999999998888877665 36799999999997644 557788999999999874
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.77 E-value=3.9e-18 Score=148.36 Aligned_cols=226 Identities=12% Similarity=0.035 Sum_probs=131.0
Q ss_pred EcCceEEEEEc---C-CCC-ceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCC
Q psy4974 79 IKGCDIRFIKY---G-SGA-QVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGR 153 (345)
Q Consensus 79 ~~g~~l~~~~~---g-~~~-p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~ 153 (345)
.+|..|+.... + +++ |+||++||++++. ..|. ....++++||.|+++|+|| +|.|.....
T Consensus 63 ~dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~-~~~~-~~~~~a~~G~~v~~~D~rG-------------~G~s~~~~~ 127 (322)
T d1vlqa_ 63 YRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGR-GFPH-DWLFWPSMGYICFVMDTRG-------------QGSGWLKGD 127 (322)
T ss_dssp GGGCEEEEEEEEECCSCSSEEEEEECCCTTCCC-CCGG-GGCHHHHTTCEEEEECCTT-------------CCCSSSCCC
T ss_pred CCCcEEEEEEEeccCCCCCccEEEEecCCCCCc-CcHH-HHHHHHhCCCEEEEeeccc-------------cCCCCCCcc
Confidence 47888885432 2 233 7899999988773 4443 3346778899999999999 887754321
Q ss_pred CCC---------------------CccchHHHHHHHHHHHHHh------CCccEEEEEeChhHHHHHHHHHhCCccccee
Q psy4974 154 SFV---------------------PFQYIEEDVDIAYELLKLL------GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKL 206 (345)
Q Consensus 154 ~~~---------------------~~~~~~~~~~~~~~~l~~~------~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~l 206 (345)
... ........+.++...++.+ +.+++.++|+|+||.+++.++...| +++++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~ 206 (322)
T d1vlqa_ 128 TPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKAL 206 (322)
T ss_dssp CCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEE
T ss_pred ccccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEE
Confidence 100 0001112233333333332 1237999999999999998888775 58888
Q ss_pred eEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEE
Q psy4974 207 VIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVL 286 (345)
Q Consensus 207 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 286 (345)
+...+......... ....... ................ .........+....+.++++|+|
T Consensus 207 v~~~~~~~~~~~~~------~~~~~~~---~~~~~~~~~~~~~~~~-----------~~~~~~~~~d~~~~a~~i~~P~L 266 (322)
T d1vlqa_ 207 LCDVPFLCHFRRAV------QLVDTHP---YAEITNFLKTHRDKEE-----------IVFRTLSYFDGVNFAARAKIPAL 266 (322)
T ss_dssp EEESCCSCCHHHHH------HHCCCTT---HHHHHHHHHHCTTCHH-----------HHHHHHHTTCHHHHHTTCCSCEE
T ss_pred EEeCCccccHHHHH------hhccccc---hhhHHhhhhcCcchhh-----------hHHHHhhhhhHHHHHhcCCCCEE
Confidence 87766443211100 0000000 0000000000000000 00011111223444567899999
Q ss_pred EEEeCCCCCCChHHHHHHHhhcC-CcEEEEeCCCCCcccccChHHHHHHHHHHHHhhc
Q psy4974 287 VFHSADDVMVSTQQVQSLLNQLK-FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 287 ~i~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
+++|++|.++|++.+..+.+.++ +++++++++++|....+ .-.+...+||++..
T Consensus 267 v~~G~~D~~vp~~~~~~~~~~~~~~~~l~~~p~~~H~~~~~---~~~~~~~~~l~~~l 321 (322)
T d1vlqa_ 267 FSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGGS---FQAVEQVKFLKKLF 321 (322)
T ss_dssp EEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTTHH---HHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcCHHHHHHHHHHCCCCeEEEEECCCCCCCccc---cCHHHHHHHHHHHh
Confidence 99999999999999999888876 57899999999954321 22233457777653
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.77 E-value=5.6e-21 Score=165.81 Aligned_cols=241 Identities=10% Similarity=-0.034 Sum_probs=134.2
Q ss_pred eeEEEcCceEEEEEcCC-CCceEEEEcCcCCCchhhHHH-------HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCC
Q psy4974 75 GFFSIKGCDIRFIKYGS-GAQVLFFTYGVLGEIRNSFKK-------QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYG 146 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~-------~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G 146 (345)
..+..+...+.|....+ .++||||+||++.++ ..|.. +++.+.++||+|+++|+|| ||
T Consensus 39 ~~~~~~~~~v~~~~p~~~~~~PvvllHG~~~~~-~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G-------------~G 104 (318)
T d1qlwa_ 39 GTVTVDQMYVRYQIPQRAKRYPITLIHGCCLTG-MTWETTPDGRMGWDEYFLRKGYSTYVIDQSG-------------RG 104 (318)
T ss_dssp EEEEESCEEEEEEEETTCCSSCEEEECCTTCCG-GGGSSCTTSCCCHHHHHHHTTCCEEEEECTT-------------ST
T ss_pred CceeeceEEEEEECCCCCCCCcEEEECCCCCCc-CccccCcccchhHHHHHHhCCCEEEEecCCC-------------CC
Confidence 34455666667765543 346799999999995 88854 5778888899999999999 99
Q ss_pred CCCCCCCCCCCccchHHHHHHHHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCcc-cceeeEeccCCCCCchh---H
Q psy4974 147 QSLPKGRSFVPFQYIEEDVDIAYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHM-VHKLVIWGTKSFLTIDN---V 220 (345)
Q Consensus 147 ~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~---~ 220 (345)
.|..+...+ +.....+++.+.++.+.. .+..++|||+||.++..++...+.. ...+++.++........ .
T Consensus 105 ~S~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (318)
T d1qlwa_ 105 RSATDISAI----NAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPN 180 (318)
T ss_dssp TSCCCCHHH----HHHHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSC
T ss_pred CCCCccccC----CHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhh
Confidence 996553222 333344444444443322 3667889999999988877665332 22333322222111000 0
Q ss_pred HHHHHhHhccCCChhhHHHHHHHcccC-CchhhhhHHHHHHHHHH--HH------HhhCchhhhccCCCCCCCEEEEEeC
Q psy4974 221 RVFEGMRRLSNWSPMARSEVLKAYDND-VNYITGIFNQYVDMVNL--IF------KSYGRNVYQELLPYVDVPVLVFHSA 291 (345)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~l~~i~~Pvl~i~G~ 291 (345)
..... ............ ..........+...... .. ..............+++|+|+++|+
T Consensus 181 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~ 250 (318)
T d1qlwa_ 181 PTVAN----------LSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGD 250 (318)
T ss_dssp HHHHH----------HHHHHHHHTSEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCCCCGGGCGGGTTSCEEEEECS
T ss_pred hhHHH----------HHHHHhhhccccchhhhcccchhhhhhhhhhhHHHHHHhhhcccccchhhhhhhccCCEEEEecC
Confidence 00000 000000000000 00000000000000000 00 0000112233455678999999999
Q ss_pred CCCCCChHH-----HHH----HHhhcCCcEEEEeC-----CCCCcccccCh-HHHHHHHHHHHHhhc
Q psy4974 292 DDVMVSTQQ-----VQS----LLNQLKFCQYYQFS-----SGGHSCHIKHG-QVFNEISRNFILEEN 343 (345)
Q Consensus 292 ~D~~v~~~~-----~~~----~~~~~~~~~~~~~~-----~~gH~~~~~~~-~~~~~~i~~fl~~~~ 343 (345)
+|.++|... .+. +.+.-++++++.++ |+||+++.|.+ +++++.|.+||+++.
T Consensus 251 ~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~~ 317 (318)
T d1qlwa_ 251 HIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNT 317 (318)
T ss_dssp SCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred cCcccChhhhHHHHHHHHHHHHHHhCCCcEEEEecccccCCCcCccccCcCHHHHHHHHHHHHHhcc
Confidence 999998532 222 23333577888865 67899998865 899999999999874
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.77 E-value=3e-17 Score=133.19 Aligned_cols=181 Identities=15% Similarity=0.131 Sum_probs=128.1
Q ss_pred EEEEEcC-CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC--C----CCCCC
Q psy4974 84 IRFIKYG-SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP--K----GRSFV 156 (345)
Q Consensus 84 l~~~~~g-~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~--~----~~~~~ 156 (345)
++....+ ++.|+||++||++++. ..|..+++.|.+. +.|+.++.+. .+.... . ....
T Consensus 7 ~~~~~~~~~~~P~vi~lHG~G~~~-~~~~~~~~~l~~~-~~v~~~~~~~-------------~~~~~~~~~~~~~~~~~- 70 (203)
T d2r8ba1 7 FHKSRAGVAGAPLFVLLHGTGGDE-NQFFDFGARLLPQ-ATILSPVGDV-------------SEHGAARFFRRTGEGVY- 70 (203)
T ss_dssp CEEEECCCTTSCEEEEECCTTCCH-HHHHHHHHHHSTT-SEEEEECCSE-------------EETTEEESSCBCGGGCB-
T ss_pred EeecCCCCCCCCEEEEECCCCCCH-HHHHHHHHHhccC-CeEEEecccc-------------ccccccccccccCcccc-
Confidence 3333344 4558999999999995 8899999999876 8899998765 222110 0 0111
Q ss_pred CccchHHHHHHHHHHH----HHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCC
Q psy4974 157 PFQYIEEDVDIAYELL----KLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNW 232 (345)
Q Consensus 157 ~~~~~~~~~~~~~~~l----~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 232 (345)
+.......++.+..++ ...+.++++++|||+||.+++.++..+|+.+.++++.++......
T Consensus 71 ~~~~~~~~~~~~~~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~--------------- 135 (203)
T d2r8ba1 71 DMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP--------------- 135 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC---------------
T ss_pred chhHHHHHHHHHHHHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeecccccccc---------------
Confidence 2222333344444444 345778999999999999999999999999999999998654210
Q ss_pred ChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC---
Q psy4974 233 SPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK--- 309 (345)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~--- 309 (345)
.........|++++||++|.++|.+.++++.+.+.
T Consensus 136 ------------------------------------------~~~~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g 173 (203)
T d2r8ba1 136 ------------------------------------------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQG 173 (203)
T ss_dssp ------------------------------------------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHS
T ss_pred ------------------------------------------ccccccccchhhccccCCCCcccHHHHHHHHHHHHHCC
Confidence 01122346799999999999999999988887763
Q ss_pred -CcEEEEeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 310 -FCQYYQFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 310 -~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
++++++++ +||.+. ++ ..+.+.+||.++
T Consensus 174 ~~v~~~~~~-ggH~~~---~~-~~~~~~~wl~~~ 202 (203)
T d2r8ba1 174 GTVETVWHP-GGHEIR---SG-EIDAVRGFLAAY 202 (203)
T ss_dssp SEEEEEEES-SCSSCC---HH-HHHHHHHHHGGG
T ss_pred CCEEEEEEC-CCCcCC---HH-HHHHHHHHHHhc
Confidence 45888897 589864 33 456689999875
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=3.9e-18 Score=143.87 Aligned_cols=227 Identities=15% Similarity=0.111 Sum_probs=129.0
Q ss_pred eeEEEcCceEEEEEc---C--CC-C-ceEEEEcCcCCC--chhhH--HHHHHhhCCCCeEEEEeCCCCchhhhccCCccC
Q psy4974 75 GFFSIKGCDIRFIKY---G--SG-A-QVLFFTYGVLGE--IRNSF--KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCS 143 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~---g--~~-~-p~vv~lHG~~~~--~~~~~--~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~ 143 (345)
..+..||..|..... + ++ + |+||++||++++ ....| ......|+++||.|+++|+|| ++
T Consensus 6 ~~i~~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rG----------s~ 75 (258)
T d1xfda2 6 RDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRG----------SG 75 (258)
T ss_dssp CCEEETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTT----------CS
T ss_pred EEEeeCCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEecccc----------cc
Confidence 346679988875432 1 12 2 789999996432 11222 233456888999999999998 11
Q ss_pred CCCCCC--CCCCCCCCccchHHHHHHHHHHHHHhC--CccEEEEEeChhHHHHHHHHHhCCc----ccceeeEeccCCCC
Q psy4974 144 GYGQSL--PKGRSFVPFQYIEEDVDIAYELLKLLG--VCKVSLFGWCDGGHLSFVFSMKYPH----MVHKLVIWGTKSFL 215 (345)
Q Consensus 144 ~~G~s~--~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~i~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~ 215 (345)
++|... .....+ ......+..+.+..+++... .+++.++|||+||.+|+.++...++ .+...+.+.+....
T Consensus 76 ~~g~~~~~~~~~~~-g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (258)
T d1xfda2 76 FQGTKLLHEVRRRL-GLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDF 154 (258)
T ss_dssp SSHHHHHHTTTTCT-TTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCT
T ss_pred ccchhHhhhhhccc-hhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceee
Confidence 122110 011111 11122222333333333222 3479999999999999988876654 35555555554432
Q ss_pred CchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCC-CCCCEEEEEeCCCC
Q psy4974 216 TIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPY-VDVPVLVFHSADDV 294 (345)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~Pvl~i~G~~D~ 294 (345)
................ .. ...+ ........+.. .++|+|+++|+.|.
T Consensus 155 ~~~~~~~~~~~~~~~~--------------~~----~~~~--------------~~~s~~~~~~~~~~~p~Li~hG~~D~ 202 (258)
T d1xfda2 155 KLYASAFSERYLGLHG--------------LD----NRAY--------------EMTKVAHRVSALEEQQFLIIHPTADE 202 (258)
T ss_dssp TSSBHHHHHHHHCCCS--------------SC----CSST--------------TTTCTHHHHTSCCSCEEEEEEETTCS
T ss_pred eccccccccccccccc--------------cc----hHHh--------------hccchhhhhhhhhcccccccccCCCC
Confidence 2111111111000000 00 0000 00000111112 36899999999999
Q ss_pred CCChHHHHHHHhhc----CCcEEEEeCCCCCcccc-cChHHHHHHHHHHHHhhcc
Q psy4974 295 MVSTQQVQSLLNQL----KFCQYYQFSSGGHSCHI-KHGQVFNEISRNFILEENK 344 (345)
Q Consensus 295 ~v~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~k 344 (345)
.+|++.+.++.+.+ .+.+++++|+++|.+.. +....+.+.+.+||+++.|
T Consensus 203 ~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~~~ 257 (258)
T d1xfda2 203 KIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFR 257 (258)
T ss_dssp SSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 99998888876654 36789999999997654 3456677999999998765
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.76 E-value=1.5e-17 Score=135.72 Aligned_cols=186 Identities=15% Similarity=0.137 Sum_probs=120.7
Q ss_pred CceEEEEEcC---CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC-CCCCCC
Q psy4974 81 GCDIRFIKYG---SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP-KGRSFV 156 (345)
Q Consensus 81 g~~l~~~~~g---~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~-~~~~~~ 156 (345)
+..+.|+..+ ++.|+||++||++++. ..|..+++.|.++ +.+++++.+.. ..|. .+.... ....+
T Consensus 8 ~~~~~~~~~~~~~~~~p~vv~lHG~g~~~-~~~~~l~~~l~~~-~~~l~~~~~~~----~~~~----~~~~~~~~~~~~- 76 (209)
T d3b5ea1 8 DLAFPYRLLGAGKESRECLFLLHGSGVDE-TTLVPLARRIAPT-ATLVAARGRIP----QEDG----FRWFERIDPTRF- 76 (209)
T ss_dssp SSSSCEEEESTTSSCCCEEEEECCTTBCT-TTTHHHHHHHCTT-SEEEEECCSEE----ETTE----EESSCEEETTEE-
T ss_pred CCcceeEecCCCCCCCCEEEEEcCCCCCH-HHHHHHHHHhccC-cEEEeeccCcC----cccC----ccccccCCcccc-
Confidence 3445555543 3458999999999995 8899999999886 99999876530 0000 000000 01111
Q ss_pred CccchHHHHHHHH----HHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhcc
Q psy4974 157 PFQYIEEDVDIAY----ELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLS 230 (345)
Q Consensus 157 ~~~~~~~~~~~~~----~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 230 (345)
+.......++++. .+.++.++ ++++++|||+||.+++.++.++|+++.+++++++......
T Consensus 77 ~~~~~~~~~~~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~~------------- 143 (209)
T d3b5ea1 77 EQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH------------- 143 (209)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS-------------
T ss_pred chhhHHHHHHHHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcccccc-------------
Confidence 1122223333333 44444443 5899999999999999999999999999999988543210
Q ss_pred CCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc--
Q psy4974 231 NWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL-- 308 (345)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~-- 308 (345)
.......++|+++++|++|.+++. .++++.+.+
T Consensus 144 --------------------------------------------~~~~~~~~~p~~~~~G~~D~~~~~-~~~~~~~~l~~ 178 (209)
T d3b5ea1 144 --------------------------------------------VPATDLAGIRTLIIAGAADETYGP-FVPALVTLLSR 178 (209)
T ss_dssp --------------------------------------------CCCCCCTTCEEEEEEETTCTTTGG-GHHHHHHHHHH
T ss_pred --------------------------------------------ccccccccchheeeeccCCCccCH-HHHHHHHHHHH
Confidence 111223468999999999999973 344454443
Q ss_pred --CCcEEEEeCCCCCcccccChHHHHHHHHHHHH
Q psy4974 309 --KFCQYYQFSSGGHSCHIKHGQVFNEISRNFIL 340 (345)
Q Consensus 309 --~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 340 (345)
.++++.++++ ||.+. +++ .+.+.+||.
T Consensus 179 ~G~~v~~~~~~g-gH~i~---~~~-~~~~~~wl~ 207 (209)
T d3b5ea1 179 HGAEVDARIIPS-GHDIG---DPD-AAIVRQWLA 207 (209)
T ss_dssp TTCEEEEEEESC-CSCCC---HHH-HHHHHHHHH
T ss_pred CCCCeEEEEECC-CCCCC---HHH-HHHHHHHhC
Confidence 2568889985 89774 334 456789985
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.75 E-value=1.9e-17 Score=134.18 Aligned_cols=173 Identities=13% Similarity=0.092 Sum_probs=122.1
Q ss_pred CCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCC------CCCCCCCccchHHHH
Q psy4974 92 GAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLP------KGRSFVPFQYIEEDV 165 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~------~~~~~~~~~~~~~~~ 165 (345)
..|+||++||++++. ..|..+++.|++. +.|++++.+. .+.... ..... +.......+
T Consensus 13 ~~P~vi~lHG~g~~~-~~~~~~~~~l~~~-~~vv~p~~~~-------------~~~~~~~~~~~~~~~~~-~~~~~~~~~ 76 (202)
T d2h1ia1 13 SKPVLLLLHGTGGNE-LDLLPLAEIVDSE-ASVLSVRGNV-------------LENGMPRFFRRLAEGIF-DEEDLIFRT 76 (202)
T ss_dssp TSCEEEEECCTTCCT-TTTHHHHHHHHTT-SCEEEECCSE-------------EETTEEESSCEEETTEE-CHHHHHHHH
T ss_pred CCCEEEEECCCCCCH-HHHHHHHHHhccC-Cceeeecccc-------------cCCCCccccccCCCCCC-chHHHHHHH
Confidence 458999999999985 8899999999875 9999987654 221110 00001 111222223
Q ss_pred HHHH----HHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHH
Q psy4974 166 DIAY----ELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSE 239 (345)
Q Consensus 166 ~~~~----~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (345)
+.+. .+.++.++ .++.++|+|+||.+++.++..+|+.+.+++++++......
T Consensus 77 ~~~~~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~---------------------- 134 (202)
T d2h1ia1 77 KELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG---------------------- 134 (202)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS----------------------
T ss_pred HHHHHHHHHHHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCccc----------------------
Confidence 3333 33444454 4999999999999999999999999999999987543210
Q ss_pred HHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEEE
Q psy4974 240 VLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYYQ 315 (345)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~~ 315 (345)
.........|+++++|++|.++|.+.++++.+.+. +.+++.
T Consensus 135 -----------------------------------~~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 179 (202)
T d2h1ia1 135 -----------------------------------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHW 179 (202)
T ss_dssp -----------------------------------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred -----------------------------------ccccccccchhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEE
Confidence 11223456799999999999999999888887764 468888
Q ss_pred eCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 316 FSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 316 ~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
++ +||.+. .+..+.+.+||.+.
T Consensus 180 ~~-ggH~~~----~~~~~~~~~wl~k~ 201 (202)
T d2h1ia1 180 EN-RGHQLT----MGEVEKAKEWYDKA 201 (202)
T ss_dssp ES-STTSCC----HHHHHHHHHHHHHH
T ss_pred EC-CCCcCC----HHHHHHHHHHHHHh
Confidence 98 589653 44567789999874
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.74 E-value=3.2e-16 Score=128.46 Aligned_cols=177 Identities=12% Similarity=0.120 Sum_probs=128.5
Q ss_pred CCceEEEEcCc---CCCc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 92 GAQVLFFTYGV---LGEI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 92 ~~p~vv~lHG~---~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
..+++|++||. +++. ......+++.|.+.||.|+.+|+|| .|.|....... ..-.+.+..
T Consensus 23 ~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG-------------~g~S~G~~~~~---~~e~~d~~a 86 (218)
T d2i3da1 23 SAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRS-------------IGRSQGEFDHG---AGELSDAAS 86 (218)
T ss_dssp TCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTT-------------STTCCSCCCSS---HHHHHHHHH
T ss_pred CCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCc-------------cCCCccccccc---hhHHHHHHH
Confidence 34689999983 4442 2445668888999999999999999 99996554321 122223333
Q ss_pred HHHHHHHhC--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcc
Q psy4974 168 AYELLKLLG--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYD 245 (345)
Q Consensus 168 ~~~~l~~~~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
+.+++.... ..++.++|+|+||.+++.++.+.+ .+.+++++.+......
T Consensus 87 a~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~~---------------------------- 137 (218)
T d2i3da1 87 ALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTYD---------------------------- 137 (218)
T ss_dssp HHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTSC----------------------------
T ss_pred HHhhhhcccccccceeEEeeehHHHHHHHHHHhhc-cccceeeccccccccc----------------------------
Confidence 344444333 347999999999999999998775 4677777776544210
Q ss_pred cCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC-----CcEEEEeCCCC
Q psy4974 246 NDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK-----FCQYYQFSSGG 320 (345)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-----~~~~~~~~~~g 320 (345)
...+....+|+++++|+.|.+++......+.+.+. ..++++++|++
T Consensus 138 -----------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAd 188 (218)
T d2i3da1 138 -----------------------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGAN 188 (218)
T ss_dssp -----------------------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCC
T ss_pred -----------------------------hhhccccCCCceeeecccceecChHHHHHHHHHHhhccCCCccEEEeCCCC
Confidence 12244567899999999999999888888776553 35889999999
Q ss_pred CcccccChHHHHHHHHHHHHhhc
Q psy4974 321 HSCHIKHGQVFNEISRNFILEEN 343 (345)
Q Consensus 321 H~~~~~~~~~~~~~i~~fl~~~~ 343 (345)
|++. .+.+++.+.+.+||+++.
T Consensus 189 HfF~-g~~~~l~~~v~~~l~~~l 210 (218)
T d2i3da1 189 HFFN-GKVDELMGECEDYLDRRL 210 (218)
T ss_dssp TTCT-TCHHHHHHHHHHHHHHHH
T ss_pred CCCc-CCHHHHHHHHHHHHHHhc
Confidence 9876 567899999999998764
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.73 E-value=1.6e-16 Score=131.69 Aligned_cols=194 Identities=18% Similarity=0.168 Sum_probs=126.2
Q ss_pred eeEEEcCceEEEEEcC---CCCceEEEEcCcCCCchhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCC
Q psy4974 75 GFFSIKGCDIRFIKYG---SGAQVLFFTYGVLGEIRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPK 151 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~g---~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~ 151 (345)
.+...+|..+...... ...|.||++|+..|.. .....+++.|+++||.|+++|+.+ .+.....
T Consensus 7 ~~~~~dg~~~~a~~~~P~~~~~P~vl~~h~~~G~~-~~~~~~a~~lA~~Gy~vl~pd~~~-------------~~~~~~~ 72 (233)
T d1dina_ 7 SIQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVN-AFMRETVSWLVDQGYAAVCPDLYA-------------RQAPGTA 72 (233)
T ss_dssp CEECTTSCEECEEEECCSSSSEEEEEEECCTTBSC-HHHHHHHHHHHHTTCEEEEECGGG-------------GTSTTCB
T ss_pred EEEcCCCCEEEEEEECCCCCCceEEEEeCCCCCCC-HHHHHHHHHHHhcCCcceeeeecc-------------CCCcCcc
Confidence 3444577777655432 2337999999887774 667788899999999999999877 4333211
Q ss_pred CCCCCCc------------cchHHHHHHHHHHHHHh---CC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 152 GRSFVPF------------QYIEEDVDIAYELLKLL---GV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 152 ~~~~~~~------------~~~~~~~~~~~~~l~~~---~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.... .. ...+....++...++.+ +. .+|.++|+|+||.+++.++...+ +.+.+.+.+...
T Consensus 73 ~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~~--~~~~~~~~~~~~ 149 (233)
T d1dina_ 73 LDPQ-DERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKGY--VDRAVGYYGVGL 149 (233)
T ss_dssp CCTT-SHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSCG
T ss_pred cChH-HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeecccccc--cceecccccccc
Confidence 1111 10 01222344445444443 22 38999999999999999887643 555554433211
Q ss_pred CCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCC
Q psy4974 215 LTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDV 294 (345)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~ 294 (345)
. ...+...++++|+|+++|++|.
T Consensus 150 ~---------------------------------------------------------~~~~~~~~i~~Pvl~~~G~~D~ 172 (233)
T d1dina_ 150 E---------------------------------------------------------KQLNKVPEVKHPALFHMGGQDH 172 (233)
T ss_dssp G---------------------------------------------------------GGGGGGGGCCSCEEEEEETTCT
T ss_pred c---------------------------------------------------------cchhhhhccCCcceeeeccccc
Confidence 0 0012234678999999999999
Q ss_pred CCChHHHHHHHhhc---CCcEEEEeCCCCCcccccCh--------HHHHHHHHHHHHhh
Q psy4974 295 MVSTQQVQSLLNQL---KFCQYYQFSSGGHSCHIKHG--------QVFNEISRNFILEE 342 (345)
Q Consensus 295 ~v~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~--------~~~~~~i~~fl~~~ 342 (345)
.+|.+..+.+.+.+ ++.++++++|++|.+..+.. ++..+.+.+||...
T Consensus 173 ~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~~ 231 (233)
T d1dina_ 173 FVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAPL 231 (233)
T ss_dssp TSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGG
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 99988887776554 35789999999997654322 23356777888654
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.73 E-value=7.6e-16 Score=129.72 Aligned_cols=212 Identities=12% Similarity=0.114 Sum_probs=123.0
Q ss_pred ceEEEEEcC-CCCceEEEEcCcCC----CchhhHH----HHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCC
Q psy4974 82 CDIRFIKYG-SGAQVLFFTYGVLG----EIRNSFK----KQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKG 152 (345)
Q Consensus 82 ~~l~~~~~g-~~~p~vv~lHG~~~----~~~~~~~----~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~ 152 (345)
..+.+.... +.+|+||++||++- .+...|. .++..+.+.||.|+++|+|. .+..
T Consensus 19 ~~~~~~~~~~~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl-------------~p~~---- 81 (263)
T d1vkha_ 19 KTLTFQEISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRL-------------SPEI---- 81 (263)
T ss_dssp GCEEEECCCTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCC-------------TTTS----
T ss_pred ceEEeccCCCCCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEecccc-------------Ccch----
Confidence 335555543 55689999999642 1123333 35567778899999999998 4332
Q ss_pred CCCCCccchHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccc-----------------eeeEeccCCCC
Q psy4974 153 RSFVPFQYIEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVH-----------------KLVIWGTKSFL 215 (345)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~-----------------~lvl~~~~~~~ 215 (345)
.+ + ..+++..+.+..+++..+.++++|+|||+||.+|+.++...++... ..+..++....
T Consensus 82 -~~-~-~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T d1vkha_ 82 -TN-P-RNLYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSL 158 (263)
T ss_dssp -CT-T-HHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCH
T ss_pred -hh-h-HHHHhhhhhhhcccccccccceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccc
Confidence 12 1 2455666666777788888899999999999999999887654221 11111111110
Q ss_pred CchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCC
Q psy4974 216 TIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVM 295 (345)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~ 295 (345)
..... ..+.........+.................. ...+.++.+|+++++|++|.+
T Consensus 159 ----~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~P~lii~G~~D~~ 215 (263)
T d1vkha_ 159 ----KELLI-------EYPEYDCFTRLAFPDGIQMYEEEPSRVMPYV------------KKALSRFSIDMHLVHSYSDEL 215 (263)
T ss_dssp ----HHHHH-------HCGGGHHHHHHHCTTCGGGCCCCHHHHHHHH------------HHHHHHHTCEEEEEEETTCSS
T ss_pred ----hhhhh-------hccccchhhhcccccccccccccccccCccc------------cccccccCCCeeeeecCCCcc
Confidence 00000 0011111112222221100111000000000 111223578999999999999
Q ss_pred CChHHHHHHHhhcC----CcEEEEeCCCCCcccccChHHHHHHHHH
Q psy4974 296 VSTQQVQSLLNQLK----FCQYYQFSSGGHSCHIKHGQVFNEISRN 337 (345)
Q Consensus 296 v~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 337 (345)
+|.+.+..+.+.++ +++++++++++|...+++ +++.+.|.+
T Consensus 216 vp~~~s~~l~~~L~~~g~~~~~~~~~~~~H~~~~~~-~~~~~~i~~ 260 (263)
T d1vkha_ 216 LTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFD 260 (263)
T ss_dssp CCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEEEECCCCchhhhcC-hHHHHHHHH
Confidence 99998888887663 578999999999866554 445555543
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.67 E-value=9e-17 Score=139.53 Aligned_cols=107 Identities=16% Similarity=0.160 Sum_probs=91.1
Q ss_pred CCCceEEEEcCcCCCch-----hhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIR-----NSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDV 165 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~-----~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~ 165 (345)
..+.||||+||++++.. ..|..+.+.|.++||+|+++|+|| +|.|+.+.. ..++++
T Consensus 6 ~~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g-------------~g~s~~~~~------~~~~l~ 66 (319)
T d1cvla_ 6 ATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSG-------------FQSDDGPNG------RGEQLL 66 (319)
T ss_dssp CCSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBC-------------SSCTTSTTS------HHHHHH
T ss_pred CCCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCC-------------CCCCCCCcc------cHHHHH
Confidence 34458999999988741 137889999999999999999999 998864432 567788
Q ss_pred HHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCC
Q psy4974 166 DIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLT 216 (345)
Q Consensus 166 ~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 216 (345)
+++.++++..+.++++++||||||.++..++..+|++|+++|+++++....
T Consensus 67 ~~i~~~~~~~~~~~v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~~gs 117 (319)
T d1cvla_ 67 AYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRGS 117 (319)
T ss_dssp HHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTTCC
T ss_pred HHHHHHHHHhCCCCEEEEeccccHHHHHHHHHHCccccceEEEECCCCCCC
Confidence 899999999999999999999999999999999999999999999865543
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.66 E-value=6.7e-16 Score=132.17 Aligned_cols=197 Identities=17% Similarity=0.105 Sum_probs=124.4
Q ss_pred ceEEEEcCcCCCchhh-HHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGEIRNS-FKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL 172 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~-~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l 172 (345)
+||||+||++++.... |..+.+.|.+.||+|+.+|+|| +|.++.. .+.+++++.+..++
T Consensus 32 ~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g-------------~g~~d~~-------~sae~la~~i~~v~ 91 (317)
T d1tcaa_ 32 KPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPP-------------FMLNDTQ-------VNTEYMVNAITALY 91 (317)
T ss_dssp SEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTT-------------TTCSCHH-------HHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCC-------------CCCCchH-------hHHHHHHHHHHHHH
Confidence 5899999998884222 5678899999999999999999 8876321 13455666677777
Q ss_pred HHhCCccEEEEEeChhHHHHHHHHHhCCc---ccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCc
Q psy4974 173 KLLGVCKVSLFGWCDGGHLSFVFSMKYPH---MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVN 249 (345)
Q Consensus 173 ~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (345)
+..+.+++.|+||||||.++..++..+|+ +|+.+|.+++............ ......+. ........
T Consensus 92 ~~~g~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~Gt~~a~~~~----~~~~~~pa----~~q~~~~s-- 161 (317)
T d1tcaa_ 92 AGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLD----ALAVSAPS----VWQQTTGS-- 161 (317)
T ss_dssp HHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHH----HTTCBCHH----HHHTBTTC--
T ss_pred HhccCCceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCCCCcccccchh----hhhccCch----hhhhcCCc--
Confidence 88888999999999999999999998874 6999999998765432221110 00000000 00000000
Q ss_pred hhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHh--hcCCcEEEEeC-------CCC
Q psy4974 250 YITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLN--QLKFCQYYQFS-------SGG 320 (345)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~--~~~~~~~~~~~-------~~g 320 (345)
.+++.+.. . . -..-.+|++.|++..|.+|.+..+..+.+ ..++++-+++. ..+
T Consensus 162 -------~fl~~L~~----~-----~--~~~~~V~~t~I~s~~D~iV~P~~~~~~~~~~~~~~~~Ni~vq~~c~~~~~~~ 223 (317)
T d1tcaa_ 162 -------ALTTALRN----A-----G--GLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFNGKNVQAQAVCGPLFVID 223 (317)
T ss_dssp -------HHHHHHHH----T-----T--TTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBTSEEEEHHHHHCTTCCCC
T ss_pred -------HHHHHHHh----C-----C--CCCCCCCEEEEecCCCcccCccccchhccccCCCCceeEEeecccCCCCcCC
Confidence 11111111 0 0 01124799999999999987765544432 23456655552 358
Q ss_pred CcccccChHHHHHHHHHHH
Q psy4974 321 HSCHIKHGQVFNEISRNFI 339 (345)
Q Consensus 321 H~~~~~~~~~~~~~i~~fl 339 (345)
|..+..+|..+ ..+.+-|
T Consensus 224 H~~l~~~p~~~-~~v~daL 241 (317)
T d1tcaa_ 224 HAGSLTSQFSY-VVGRSAL 241 (317)
T ss_dssp TTHHHHBHHHH-HHHHHHH
T ss_pred ccccccCHHHH-HHHHHHH
Confidence 98887776544 3444444
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.65 E-value=5.1e-16 Score=130.55 Aligned_cols=181 Identities=13% Similarity=-0.007 Sum_probs=115.4
Q ss_pred cCCCCceEEEEcCcCCC--chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHH
Q psy4974 89 YGSGAQVLFFTYGVLGE--IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVD 166 (345)
Q Consensus 89 ~g~~~p~vv~lHG~~~~--~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~ 166 (345)
.+...|+||++||++.. ....|..++..|+++||.|+.+|+|. .+.. .+ ....++..+
T Consensus 58 ~~~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl-------------~p~~-----~~--p~~~~d~~~ 117 (261)
T d2pbla1 58 EGTPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYEL-------------CPEV-----RI--SEITQQISQ 117 (261)
T ss_dssp SSSCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCC-------------TTTS-----CH--HHHHHHHHH
T ss_pred CCCCCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeecccccc-------------cccc-----cC--chhHHHHHH
Confidence 34456899999996522 24667778888999999999999998 4332 11 112222233
Q ss_pred HHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC------cccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHH
Q psy4974 167 IAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP------HMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEV 240 (345)
Q Consensus 167 ~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
.+..+.+.. .++|.|+|||.||++|..++.... ..+++++.+++............
T Consensus 118 a~~~~~~~~-~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 179 (261)
T d2pbla1 118 AVTAAAKEI-DGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSM----------------- 179 (261)
T ss_dssp HHHHHHHHS-CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTT-----------------
T ss_pred HHHHHHhcc-cCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhhhh-----------------
Confidence 333333333 479999999999999987765432 35788888888765432111000
Q ss_pred HHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcCCcEEEEeCCCC
Q psy4974 241 LKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLKFCQYYQFSSGG 320 (345)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~g 320 (345)
...+... .+. ... ............|+++++|++|..++.+.++.+.+.+ +++.+++++.+
T Consensus 180 ~~~~~~~-------~~~--------~~~---~SP~~~~~~~~~P~li~~G~~D~~~~~~qs~~~~~~l-~~~~~~~~~~~ 240 (261)
T d2pbla1 180 NEKFKMD-------ADA--------AIA---ESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAW-DADHVIAFEKH 240 (261)
T ss_dssp HHHHCCC-------HHH--------HHH---TCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHH-TCEEEEETTCC
T ss_pred cccccCC-------HHH--------HHH---hCchhhcccCCCeEEEEEecCCCchHHHHHHHHHHHh-CCCceEeCCCC
Confidence 0000000 000 000 1123345567899999999999888888888998887 56788899999
Q ss_pred Cccccc
Q psy4974 321 HSCHIK 326 (345)
Q Consensus 321 H~~~~~ 326 (345)
|+-.++
T Consensus 241 HF~vi~ 246 (261)
T d2pbla1 241 HFNVIE 246 (261)
T ss_dssp TTTTTG
T ss_pred chhHHH
Confidence 976543
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.64 E-value=2.8e-15 Score=122.80 Aligned_cols=193 Identities=15% Similarity=0.201 Sum_probs=117.6
Q ss_pred cCCCCceEEEEcCcCCCchhhHHHHHHhhCCC--CeEEEEeCCCCchhhhccCCccCCCCC-C-CCCCCCCCCccchHHH
Q psy4974 89 YGSGAQVLFFTYGVLGEIRNSFKKQLTAFDPK--LFTSIFWDPPGNVVLYLLGKTCSGYGQ-S-LPKGRSFVPFQYIEED 164 (345)
Q Consensus 89 ~g~~~p~vv~lHG~~~~~~~~~~~~~~~L~~~--G~~vi~~D~~G~~~~~~~g~~~~~~G~-s-~~~~~~~~~~~~~~~~ 164 (345)
.++.+++||++||++++. ..|..+.+.|.+. ++.+++++-|........|...+.+.. . ....... ..+.+++.
T Consensus 10 ~~~~~~~Vi~lHG~G~~~-~~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~ 87 (218)
T d1auoa_ 10 AKPADACVIWLHGLGADR-YDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSI-SLEELEVS 87 (218)
T ss_dssp SSCCSEEEEEECCTTCCT-TTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEE-CHHHHHHH
T ss_pred CCCCCeEEEEEcCCCCCh-hhHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccc-hHHHHHHH
Confidence 344457999999999995 8888888877654 477787776541111111110000100 0 0011111 22223333
Q ss_pred HHHHHHHHHH---hC--CccEEEEEeChhHHHHHHHHHh-CCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHH
Q psy4974 165 VDIAYELLKL---LG--VCKVSLFGWCDGGHLSFVFSMK-YPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS 238 (345)
Q Consensus 165 ~~~~~~~l~~---~~--~~~i~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (345)
...+.++++. .+ .++++++|+|+||.+|+.++.. .+..+.+++++++.........
T Consensus 88 ~~~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~~~------------------ 149 (218)
T d1auoa_ 88 AKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDEL------------------ 149 (218)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTTC------------------
T ss_pred HHHHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCccccccc------------------
Confidence 3344444432 23 4589999999999999988765 4567899999887433110000
Q ss_pred HHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEE
Q psy4974 239 EVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYY 314 (345)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~ 314 (345)
... ....+.|++++||++|.++|.+.+++..+.+. +++++
T Consensus 150 ------~~~------------------------------~~~~~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~ 193 (218)
T d1auoa_ 150 ------ELS------------------------------ASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQ 193 (218)
T ss_dssp ------CCC------------------------------HHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEE
T ss_pred ------ccc------------------------------hhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEE
Confidence 000 00125699999999999999998888877663 56888
Q ss_pred EeCCCCCcccccChHHHHHHHHHHHHhh
Q psy4974 315 QFSSGGHSCHIKHGQVFNEISRNFILEE 342 (345)
Q Consensus 315 ~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 342 (345)
+++ +||.+. ++..+.+.+||.+.
T Consensus 194 ~~~-~gH~i~----~~~~~~i~~wl~~~ 216 (218)
T d1auoa_ 194 EYP-MGHEVL----PQEIHDIGAWLAAR 216 (218)
T ss_dssp EES-CSSSCC----HHHHHHHHHHHHHH
T ss_pred EEC-CCCccC----HHHHHHHHHHHHHh
Confidence 897 799664 33456788998764
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.58 E-value=1.3e-15 Score=129.64 Aligned_cols=101 Identities=17% Similarity=0.110 Sum_probs=86.1
Q ss_pred CCceEEEEcCcCCCch----hhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 92 GAQVLFFTYGVLGEIR----NSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 92 ~~p~vv~lHG~~~~~~----~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
.+.||||+||++++.. ..|..+.+.|.+.||+|+++|++| +|.+. ...++++++
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~-------------~~~~~---------~~a~~l~~~ 63 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQ-------------LDTSE---------VRGEQLLQQ 63 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCS-------------SSCHH---------HHHHHHHHH
T ss_pred CCCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCC-------------CCCcH---------HHHHHHHHH
Confidence 3447999999988731 237889999999999999999999 87541 245677888
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
+.++++..+.+++++|||||||.++..++..+|++|+++|.++++..
T Consensus 64 i~~~~~~~g~~~v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~tPh~ 110 (285)
T d1ex9a_ 64 VEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHK 110 (285)
T ss_dssp HHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred HHHHHHHcCCCeEEEEEECccHHHHHHHHHHCCccceeEEEECCCCC
Confidence 88999999999999999999999999999999999999999998654
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.51 E-value=3.7e-13 Score=116.01 Aligned_cols=229 Identities=13% Similarity=-0.019 Sum_probs=120.7
Q ss_pred eeEEEcCceEEEEEc--CCCCceEEEEcCcC---CCchhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCC
Q psy4974 75 GFFSIKGCDIRFIKY--GSGAQVLFFTYGVL---GEIRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQS 148 (345)
Q Consensus 75 ~~~~~~g~~l~~~~~--g~~~p~vv~lHG~~---~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s 148 (345)
..+...+..+..+.+ ....|.||++||++ ++ ...+..++..+.. .|+.|+.+|+|. .-
T Consensus 59 ~~i~~~~g~i~~~iy~P~~~~P~il~iHGGg~~~g~-~~~~~~~~~~l~~~~g~~Vv~v~Yrl-------------ap-- 122 (311)
T d1jjia_ 59 RTIKGRNGDIRVRVYQQKPDSPVLVYYHGGGFVICS-IESHDALCRRIARLSNSTVVSVDYRL-------------AP-- 122 (311)
T ss_dssp EEEEETTEEEEEEEEESSSSEEEEEEECCSTTTSCC-TGGGHHHHHHHHHHHTSEEEEEECCC-------------TT--
T ss_pred EEEeCCCCcEEEEEEcCCCCceEEEEEcCCCCccCC-hhhhhhhhhhhhhcCCcEEEEecccc-------------cc--
Confidence 334443334444333 33347999999985 34 3556666666644 499999999999 32
Q ss_pred CCCCCCCC-CccchHHHHHHHHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhC----CcccceeeEeccCCCCCchhHH
Q psy4974 149 LPKGRSFV-PFQYIEEDVDIAYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKY----PHMVHKLVIWGTKSFLTIDNVR 221 (345)
Q Consensus 149 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~ 221 (345)
...|. .........+.+.+..+.+++ +++.++|+|.||.+++.++... ...+.+.+++.|..........
T Consensus 123 ---~~~~p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~ 199 (311)
T d1jjia_ 123 ---EHKFPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPS 199 (311)
T ss_dssp ---TSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHH
T ss_pred ---ccccchhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceeeeccCccc
Confidence 11220 111112222233333344454 4899999999999888776543 2346778888887654332222
Q ss_pred HHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHH
Q psy4974 222 VFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQV 301 (345)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~ 301 (345)
......................+.... .. ...............-.|+++++|+.|.+++ .+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------------~~~~~~sp~~~~~~~~pP~li~~g~~D~l~d--~~ 261 (311)
T d1jjia_ 200 LLEFGEGLWILDQKIMSWFSEQYFSRE--ED--------------KFNPLASVIFADLENLPPALIITAEYDPLRD--EG 261 (311)
T ss_dssp HHHTSSSCSSCCHHHHHHHHHHHCSSG--GG--------------GGCTTTSGGGSCCTTCCCEEEEEEEECTTHH--HH
T ss_pred ccccccccccccHHHhhhhhhhccccc--cc--------------ccccccchhhcccccCCCEEEEEcCCCCChH--HH
Confidence 211111111111111111111111110 00 0000000111111223599999999997654 44
Q ss_pred HHHHhhc----CCcEEEEeCCCCCcccc-----cChHHHHHHHHHHHH
Q psy4974 302 QSLLNQL----KFCQYYQFSSGGHSCHI-----KHGQVFNEISRNFIL 340 (345)
Q Consensus 302 ~~~~~~~----~~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~ 340 (345)
..+++.+ -.++++++++++|.+.. ++..+..+.|.+||.
T Consensus 262 ~~~~~~L~~~Gv~v~~~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl~ 309 (311)
T d1jjia_ 262 EVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLV 309 (311)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCccccCCCcCHHHHHHHHHHHHHhC
Confidence 4444444 35799999999996432 233566777888874
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.51 E-value=1.2e-13 Score=121.10 Aligned_cols=123 Identities=12% Similarity=0.024 Sum_probs=89.7
Q ss_pred eEEE-cCceEEEEEc---CCCC-ceEEEEcCcCCCchhhH---HHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCC
Q psy4974 76 FFSI-KGCDIRFIKY---GSGA-QVLFFTYGVLGEIRNSF---KKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQ 147 (345)
Q Consensus 76 ~~~~-~g~~l~~~~~---g~~~-p~vv~lHG~~~~~~~~~---~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~ 147 (345)
.|.. ||++|....+ +.++ |+||+.||.+......+ ....+.|+++||.|+++|.|| .|.
T Consensus 9 ~ipmrDGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG-------------~g~ 75 (347)
T d1ju3a2 9 MVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRG-------------LFA 75 (347)
T ss_dssp EEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTT-------------STT
T ss_pred EEECCCCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCC-------------ccc
Confidence 4444 8988886543 3333 78999999765421222 223466788999999999999 999
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 148 SLPKGRSFVPFQYIEEDVDIAYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 148 s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
|......+ ........++.+++..... .+|.++|+|+||.+++.+|...|..+++++...+...
T Consensus 76 S~G~~~~~---~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d 141 (347)
T d1ju3a2 76 SEGEFVPH---VDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASAD 141 (347)
T ss_dssp CCSCCCTT---TTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSC
T ss_pred cCCccccc---cchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccch
Confidence 97654432 2334456667777776543 3899999999999999999998888999998887654
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.49 E-value=4.8e-13 Score=117.62 Aligned_cols=230 Identities=13% Similarity=0.030 Sum_probs=123.2
Q ss_pred EcCceEEEEEc---C-CC-CceEEEEcCcCC---Cc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCC
Q psy4974 79 IKGCDIRFIKY---G-SG-AQVLFFTYGVLG---EI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSL 149 (345)
Q Consensus 79 ~~g~~l~~~~~---g-~~-~p~vv~lHG~~~---~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~ 149 (345)
.+|..|....+ + ++ .|+||++||++. +. ...+..++..|++.|+.|+++|+|. -+...
T Consensus 87 ~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRl-------------a~~~~ 153 (358)
T d1jkma_ 87 VDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRN-------------AWTAE 153 (358)
T ss_dssp TTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCC-------------SEETT
T ss_pred CCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeecc-------------ccccc
Confidence 47777665433 2 22 278999999854 21 2456678888888899999999999 43221
Q ss_pred CCCCCCCCccchHHHHHHHHHH---HHHhCCccEEEEEeChhHHHHHHHHHh-----CCcccceeeEeccCCCCCchhHH
Q psy4974 150 PKGRSFVPFQYIEEDVDIAYEL---LKLLGVCKVSLFGWCDGGHLSFVFSMK-----YPHMVHKLVIWGTKSFLTIDNVR 221 (345)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~i~lvGhS~Gg~ia~~~a~~-----~p~~v~~lvl~~~~~~~~~~~~~ 221 (345)
+...| .. .+++....+..+ ...++.+++.|+|+|.||.+|+.++.. ....+.++++..|..........
T Consensus 154 -pe~~~-p~-~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 230 (358)
T d1jkma_ 154 -GHHPF-PS-GVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDH 230 (358)
T ss_dssp -EECCT-TH-HHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCH
T ss_pred -ccCCC-ch-hhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceeccccCccc
Confidence 11222 11 233333222222 234677799999999999999877654 23457888888876553221111
Q ss_pred H--HHHhHh-----ccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhh---hccCCCCCCCEEEEEeC
Q psy4974 222 V--FEGMRR-----LSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVY---QELLPYVDVPVLVFHSA 291 (345)
Q Consensus 222 ~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~i~~Pvl~i~G~ 291 (345)
. ...... ...............+.... ... ........ ...+.. -.|+++++|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------~~p~~~~~~a~~~~~~~-lPp~li~~g~ 294 (358)
T d1jkma_ 231 ERRLTELPSLVENDGYFIENGGMALLVRAYDPTG--EHA-------------EDPIAWPYFASEDELRG-LPPFVVAVNE 294 (358)
T ss_dssp HHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSS--TTT-------------TCTTTCGGGCCHHHHTT-CCCEEEEEET
T ss_pred hhhcccccchhcccccccchhhhhhHHhhcCCcc--CCc-------------cCccccccccchhhccC-CCCEEEEECC
Confidence 1 100000 00000111111111111100 000 00000000 000111 1399999999
Q ss_pred CCCCCChHHHHHHHhhc----CCcEEEEeCCCCCcccc-------cChHHHHHHHHHHHHhh
Q psy4974 292 DDVMVSTQQVQSLLNQL----KFCQYYQFSSGGHSCHI-------KHGQVFNEISRNFILEE 342 (345)
Q Consensus 292 ~D~~v~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-------~~~~~~~~~i~~fl~~~ 342 (345)
.|.+.+ .+..+++.+ -.++++++++.+|.+.. +..+++.+.|..|+.++
T Consensus 295 ~D~l~~--e~~~~~~~L~~aGv~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~ 354 (358)
T d1jkma_ 295 LDPLRD--EGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADR 354 (358)
T ss_dssp TCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHH--HHHHHHHHHHHCCCcEEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHHH
Confidence 997643 444554444 36799999999996422 22356778899999765
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.48 E-value=1e-12 Score=113.50 Aligned_cols=220 Identities=12% Similarity=-0.041 Sum_probs=109.8
Q ss_pred ceEEEEcCcC---CCchhhHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 94 QVLFFTYGVL---GEIRNSFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 94 p~vv~lHG~~---~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
|+||++||++ ++ ...+..++..++. .||.|+.+|+|. ......+. .+++..+....+.
T Consensus 79 Pvvv~iHGGG~~~g~-~~~~~~~~~~la~~~G~~V~~vdYrl-------------~pe~~~~~----~~~d~~~~~~~~~ 140 (317)
T d1lzla_ 79 PVLLWIHGGGFAIGT-AESSDPFCVEVARELGFAVANVEYRL-------------APETTFPG----PVNDCYAALLYIH 140 (317)
T ss_dssp EEEEEECCSTTTSCC-GGGGHHHHHHHHHHHCCEEEEECCCC-------------TTTSCTTH----HHHHHHHHHHHHH
T ss_pred cEEEEecCccccccc-ccccchHHHhHHhhcCCccccccccc-------------cccccccc----cccccccchhHHH
Confidence 7899999975 34 3566666666654 499999999998 54332111 1112222233333
Q ss_pred HHHHHhCC--ccEEEEEeChhHHHHHHHHHhCCc----ccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHH-
Q psy4974 170 ELLKLLGV--CKVSLFGWCDGGHLSFVFSMKYPH----MVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLK- 242 (345)
Q Consensus 170 ~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 242 (345)
+..+.+++ ++|+++|+|.||.+++.++...++ .....++..+......... ..........+..........
T Consensus 141 ~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~ 219 (317)
T d1lzla_ 141 AHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETV-SMTNFVDTPLWHRPNAILSWKY 219 (317)
T ss_dssp HTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSH-HHHHCSSCSSCCHHHHHHHHHH
T ss_pred HHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhccccccccccccccccccccccc-ccccccccchhhhhhhHHHHhh
Confidence 33445554 479999999999999988876432 1223333333222111111 111110000110000000000
Q ss_pred HcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEEEEeCC
Q psy4974 243 AYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQYYQFSS 318 (345)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~~~~~~ 318 (345)
.+........... .................|+++++|+.|.++ ..++.+++.+ ..++++++++
T Consensus 220 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~pp~li~~g~~D~l~--~~~~~~~~~L~~~G~~v~~~~~~g 286 (317)
T d1lzla_ 220 YLGESYSGPEDPD-----------VSIYAAPSRATDLTGLPPTYLSTMELDPLR--DEGIEYALRLLQAGVSVELHSFPG 286 (317)
T ss_dssp HHCTTCCCTTCSC-----------CCTTTCGGGCSCCTTCCCEEEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETT
T ss_pred hccccccCCCCch-----------hccccCchhhhhccCCCCeEEEECCCCCCH--HHHHHHHHHHHHCCCCEEEEEECc
Confidence 0000000000000 000000000001122369999999999653 4555665554 3579999999
Q ss_pred CCCcccc-c---ChHHHHHHHHHHHHhhccC
Q psy4974 319 GGHSCHI-K---HGQVFNEISRNFILEENKT 345 (345)
Q Consensus 319 ~gH~~~~-~---~~~~~~~~i~~fl~~~~k~ 345 (345)
++|.+.. . ..++..+.+.+||++..|+
T Consensus 287 ~~H~f~~~~~~~~~~~~~~~~~~~l~r~Lrs 317 (317)
T d1lzla_ 287 TFHGSALVATAAVSERGAAEALTAIRRGLRS 317 (317)
T ss_dssp CCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC
T ss_pred CccCCcccCCchHHHHHHHHHHHHHHHHhCC
Confidence 9996543 2 1234556678888887764
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.37 E-value=1.5e-11 Score=109.56 Aligned_cols=211 Identities=13% Similarity=0.029 Sum_probs=118.7
Q ss_pred HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC---------------
Q psy4974 113 QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELLKLLGV--------------- 177 (345)
Q Consensus 113 ~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------------- 177 (345)
..++|+++||.|+.+|.|| .|.|......+ .. +..+|..++++.+..
T Consensus 128 ~~~~~~~~GYavv~~D~RG-------------~g~S~G~~~~~----~~-~e~~D~~~~IeWl~~~~~~~~~~~~~~~~~ 189 (405)
T d1lnsa3 128 LNDYFLTRGFASIYVAGVG-------------TRSSDGFQTSG----DY-QQIYSMTAVIDWLNGRARAYTSRKKTHEIK 189 (405)
T ss_dssp HHHHHHTTTCEEEEECCTT-------------STTSCSCCCTT----SH-HHHHHHHHHHHHHTTSSCEESSTTCCCEEC
T ss_pred chHHHHhCCCEEEEECCCC-------------CCCCCCccccC----Ch-hhhhhHHHHHHHHHhccccccccccccccc
Confidence 4467889999999999999 99997654333 22 335566666666532
Q ss_pred -----ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCC-c--
Q psy4974 178 -----CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDV-N-- 249 (345)
Q Consensus 178 -----~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 249 (345)
.+|.++|+|+||.+++.+|...|..++++|..++........... ........+................ .
T Consensus 190 q~WsnGkVGm~G~SY~G~~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (405)
T d1lnsa3 190 ASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYREN-GLVRSPGGFPGEDLDVLAALTYSRNLDGA 268 (405)
T ss_dssp CTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSS-SSBCCCTTCTTCCHHHHHHHHCGGGGSHH
T ss_pred ccccCCeeEEEecCHHHHHHHHHHhcCCccceEEEecCccccHHHHhhcC-Cccccccchhhhhhhhhhccccccccccc
Confidence 279999999999999999999988899999888765421100000 0000000000000000000000000 0
Q ss_pred hhhhhHHHHHHHHHHHH-----------HhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC---CcEEEE
Q psy4974 250 YITGIFNQYVDMVNLIF-----------KSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK---FCQYYQ 315 (345)
Q Consensus 250 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~---~~~~~~ 315 (345)
................. ..+........+.+|++|+|+++|..|..++...+..+.+.++ ..++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y~al~~~~~~~Lil 348 (405)
T d1lnsa3 269 DFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFL 348 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEE
T ss_pred hhhhchhhhhhccchhhhhhhhccccchhhhhhcChhhhhhcCCCCEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEE
Confidence 00000000000000000 1111223345677899999999999999998887777777664 245555
Q ss_pred eCCCCCccccc-ChHHHHHHHHHHHHhhc
Q psy4974 316 FSSGGHSCHIK-HGQVFNEISRNFILEEN 343 (345)
Q Consensus 316 ~~~~gH~~~~~-~~~~~~~~i~~fl~~~~ 343 (345)
-+ .+|..... ....+.+.+.+||+...
T Consensus 349 gp-w~H~~~~~~~~~d~~~~~~~wFD~~L 376 (405)
T d1lnsa3 349 HR-GAHIYMNSWQSIDFSETINAYFVAKL 376 (405)
T ss_dssp ES-CSSCCCTTBSSCCHHHHHHHHHHHHH
T ss_pred eC-CCCCCCcccccchHHHHHHHHHHHHh
Confidence 55 79975432 23345566666776544
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.37 E-value=9.4e-12 Score=110.09 Aligned_cols=125 Identities=11% Similarity=-0.016 Sum_probs=82.5
Q ss_pred eEEE-cCceEEEEE---cCCCC-ceEEEEcCcCCCc----------hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCC
Q psy4974 76 FFSI-KGCDIRFIK---YGSGA-QVLFFTYGVLGEI----------RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGK 140 (345)
Q Consensus 76 ~~~~-~g~~l~~~~---~g~~~-p~vv~lHG~~~~~----------~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~ 140 (345)
.+.. ||++|.... .+.++ |+||+.|+.+.+. ...+....+.|+++||.|+.+|.||
T Consensus 28 ~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG--------- 98 (381)
T d1mpxa2 28 MIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRG--------- 98 (381)
T ss_dssp EEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTT---------
T ss_pred EEECCCCCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCc---------
Confidence 3444 899988544 34444 7888888765321 0111234467889999999999999
Q ss_pred ccCCCCCCCCCCCCCC---------CccchHHHHHHHHHHHHHh-CC--ccEEEEEeChhHHHHHHHHHhCCcccceeeE
Q psy4974 141 TCSGYGQSLPKGRSFV---------PFQYIEEDVDIAYELLKLL-GV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVI 208 (345)
Q Consensus 141 ~~~~~G~s~~~~~~~~---------~~~~~~~~~~~~~~~l~~~-~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 208 (345)
+|.|........ ..... +...++.+++... .. .+|.++|+|+||.+++.+|...|+.++++|.
T Consensus 99 ----~g~S~G~~~~~~~~~~~~~~~~~~~~-~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~ 173 (381)
T d1mpxa2 99 ----KYGSEGDYVMTRPLRGPLNPSEVDHA-TDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVP 173 (381)
T ss_dssp ----STTCCSCCCTTCCCSBTTBCSSCCHH-HHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEE
T ss_pred ----cCCCCCceeccchhhhhcccchhHHH-HHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeee
Confidence 999865322110 11112 2233333444333 23 3899999999999999999999989999999
Q ss_pred eccCCC
Q psy4974 209 WGTKSF 214 (345)
Q Consensus 209 ~~~~~~ 214 (345)
..+...
T Consensus 174 ~~~~~d 179 (381)
T d1mpxa2 174 ESPMID 179 (381)
T ss_dssp ESCCCC
T ss_pred eccccc
Confidence 887654
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.35 E-value=3.9e-11 Score=100.87 Aligned_cols=233 Identities=12% Similarity=-0.027 Sum_probs=119.7
Q ss_pred EEcCceEEEEEc---C---C-CCceEEEEcCcCCCc--hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCC
Q psy4974 78 SIKGCDIRFIKY---G---S-GAQVLFFTYGVLGEI--RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQS 148 (345)
Q Consensus 78 ~~~g~~l~~~~~---g---~-~~p~vv~lHG~~~~~--~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s 148 (345)
..||.+|..... + + .-|+||++||+++.. ..........+...++.+...+.++ ....
T Consensus 14 s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~ 80 (280)
T d1qfma2 14 SKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRG-------------GGEY 80 (280)
T ss_dssp CTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTT-------------SSTT
T ss_pred CCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeecccccc-------------cccc
Confidence 348888875542 2 1 227999999976541 0111222333444567777777766 2211
Q ss_pred CCCC-CCCCCccchHHHHHHHHHH----HHHhC--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHH
Q psy4974 149 LPKG-RSFVPFQYIEEDVDIAYEL----LKLLG--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVR 221 (345)
Q Consensus 149 ~~~~-~~~~~~~~~~~~~~~~~~~----l~~~~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 221 (345)
.... ... .........++.... ..... .....++|+|.||..+...+...++.+++++...+..........
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (280)
T d1qfma2 81 GETWHKGG-ILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKY 159 (280)
T ss_dssp HHHHHHTT-SGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGS
T ss_pred chhhhhcc-cccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccchhhhccc
Confidence 0000 000 011111222222221 22222 237889999999999999999999888888777766543211110
Q ss_pred HHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHH
Q psy4974 222 VFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQV 301 (345)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~ 301 (345)
..... .. ....... ..... .......................|+|++||++|..||...+
T Consensus 160 ~~~~~---------~~---~~~~~~~------~~~~~--~~~~~~~~~~~~s~~~~~~~~~pP~LiihG~~D~~Vp~~~s 219 (280)
T d1qfma2 160 TIGHA---------WT---TDYGCSD------SKQHF--EWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHS 219 (280)
T ss_dssp TTGGG---------GH---HHHCCTT------SHHHH--HHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHH
T ss_pred ccccc---------ce---ecccCCC------ccccc--ccccccccccccchhhhcccCCCceEEeecccCCCCCHHHH
Confidence 00000 00 0000000 00000 00000000101011111222234899999999999999988
Q ss_pred HHHHhhc-----------CCcEEEEeCCCCCcccccChH--HHHHHHHHHHHhhcc
Q psy4974 302 QSLLNQL-----------KFCQYYQFSSGGHSCHIKHGQ--VFNEISRNFILEENK 344 (345)
Q Consensus 302 ~~~~~~~-----------~~~~~~~~~~~gH~~~~~~~~--~~~~~i~~fl~~~~k 344 (345)
.++.+.+ ..+++++++++||.+.....+ +....+.+||+++.|
T Consensus 220 ~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L~ 275 (280)
T d1qfma2 220 LKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLN 275 (280)
T ss_dssp HHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhcC
Confidence 8887776 136899999999976433222 233457789988765
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.35 E-value=7.5e-12 Score=107.46 Aligned_cols=231 Identities=12% Similarity=-0.011 Sum_probs=119.6
Q ss_pred eeeeEEEcCceEEEEEc---C-CC-CceEEEEcCcC---CCchhhHHHHHHhhCCC-CeEEEEeCCCCchhhhccCCccC
Q psy4974 73 TEGFFSIKGCDIRFIKY---G-SG-AQVLFFTYGVL---GEIRNSFKKQLTAFDPK-LFTSIFWDPPGNVVLYLLGKTCS 143 (345)
Q Consensus 73 ~~~~~~~~g~~l~~~~~---g-~~-~p~vv~lHG~~---~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~~~~~~~g~~~~ 143 (345)
+...+..+|.++....+ + ++ .|+||++||++ ++ ...+..+...++.+ |+.|+.+|+|.
T Consensus 47 ~~~~~~~~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~-~~~~~~~~~~~a~~~~~~v~~v~Yrl------------ 113 (308)
T d1u4na_ 47 REFDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGD-LETHDPVCRVLAKDGRAVVFSVDYRL------------ 113 (308)
T ss_dssp EEEEEEETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCC-TTTTHHHHHHHHHHHTSEEEEECCCC------------
T ss_pred EEEEEecCCceEEEEEEeccccCCCCCEEEEEecCeeeeec-cccccchhhhhhhccccccccccccc------------
Confidence 34455667766654432 2 22 27899999975 34 36666777777666 46788999988
Q ss_pred CCCCCCCCCCCCCCccchHHHHHHHHHHHHH----hC--CccEEEEEeChhHHHHHHHHHhCCc----ccceeeEeccCC
Q psy4974 144 GYGQSLPKGRSFVPFQYIEEDVDIAYELLKL----LG--VCKVSLFGWCDGGHLSFVFSMKYPH----MVHKLVIWGTKS 213 (345)
Q Consensus 144 ~~G~s~~~~~~~~~~~~~~~~~~~~~~~l~~----~~--~~~i~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~ 213 (345)
.... .+ ....+++.+...++.. ++ .++++++|+|.||.+++.++....+ .+.+..++.+..
T Consensus 114 -~p~~-----~~---p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (308)
T d1u4na_ 114 -APEH-----KF---PAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPST 184 (308)
T ss_dssp -TTTS-----CT---THHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCC
T ss_pred -cccc-----cc---ccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCccccccccccc
Confidence 3222 11 1222223333333332 22 2479999999999999888765432 356666666654
Q ss_pred CCCchhHHHHH-HhHhccCCChhhHHHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCC
Q psy4974 214 FLTIDNVRVFE-GMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSAD 292 (345)
Q Consensus 214 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~ 292 (345)
........... ...................+.... .. . .............. --.|+++++|+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~-----------~~~~~s~~~~~d~~-~~Pp~li~~g~~ 249 (308)
T d1u4na_ 185 GYDPAHPPASIEENAEGYLLTGGMSLWFLDQYLNSL--EE-L-----------THPWFSPVLYPDLS-GLPPAYIATAQY 249 (308)
T ss_dssp CCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHCSSG--GG-G-----------GCTTTCGGGCSCCT-TCCCEEEEEEEE
T ss_pred ccccccccchhhhccccccccchhhhhhhhcccCcc--cc-c-----------cchhhhhhhchhhc-CCCCeeEEecCc
Confidence 43221111110 000000000111111111111000 00 0 00000000000111 124899999999
Q ss_pred CCCCChHHHHHHHhhc----CCcEEEEeCCCCCcccc-----cChHHHHHHHHHHHHhh
Q psy4974 293 DVMVSTQQVQSLLNQL----KFCQYYQFSSGGHSCHI-----KHGQVFNEISRNFILEE 342 (345)
Q Consensus 293 D~~v~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~ 342 (345)
|.+++ .++.+.+.+ ..++++++++++|.+.. ....+..+.+.+||++.
T Consensus 250 D~l~~--~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~ 306 (308)
T d1u4na_ 250 DPLRD--VGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDA 306 (308)
T ss_dssp CTTHH--HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHH
T ss_pred CCchH--HHHHHHHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 97654 455555554 35799999999996543 22346778888999875
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.26 E-value=2.6e-10 Score=96.23 Aligned_cols=128 Identities=13% Similarity=0.131 Sum_probs=81.9
Q ss_pred cCceEEEEEcCCCCceEEEEcCcCCC-chhhHHH---HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC
Q psy4974 80 KGCDIRFIKYGSGAQVLFFTYGVLGE-IRNSFKK---QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF 155 (345)
Q Consensus 80 ~g~~l~~~~~g~~~p~vv~lHG~~~~-~~~~~~~---~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~ 155 (345)
-|..+.....+.+.|+|+|+||.++. ....|.. +.+.+.+.|+.|+.+|-.. . ++.... +..+.......
T Consensus 16 ~~r~i~~~~~~~~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~--~-~~~~~~---~~~~~~~~~~~ 89 (280)
T d1dqza_ 16 MGRDIKVQFQGGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQ--S-SFYTDW---YQPSQSNGQNY 89 (280)
T ss_dssp TTEEEEEEEECCSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCT--T-CTTSBC---SSSCTTTTCCS
T ss_pred CCCcceEEeeCCCCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCC--C-CcCccc---cCCcccccCCc
Confidence 34556655566666899999998664 1256654 4567788899999999532 0 000000 00000001110
Q ss_pred CCccchHH-HHHHHHHHHHHh---CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 156 VPFQYIEE-DVDIAYELLKLL---GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 156 ~~~~~~~~-~~~~~~~~l~~~---~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
.. .+++ .++++..++++. +.+++.++|+||||+.|+.+|.++|+++.+++.+++....
T Consensus 90 -~~-~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~~ 151 (280)
T d1dqza_ 90 -TY-KWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNP 151 (280)
T ss_dssp -CC-BHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCT
T ss_pred -ch-hHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccCc
Confidence 11 2333 366677666553 3457899999999999999999999999999999987653
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.26 E-value=8.2e-11 Score=97.93 Aligned_cols=111 Identities=10% Similarity=0.072 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHh-----CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhH
Q psy4974 163 EDVDIAYELLKLL-----GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMAR 237 (345)
Q Consensus 163 ~~~~~~~~~l~~~-----~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (345)
..++++...++.. ..+++.++|+|+||..++.+|.++|+.+++++.+++.........
T Consensus 115 ~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~~~~~~~----------------- 177 (255)
T d1jjfa_ 115 DLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNER----------------- 177 (255)
T ss_dssp HHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHHH-----------------
T ss_pred HHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcCCccccc-----------------
Confidence 3455555555442 234799999999999999999999999999999988654321110
Q ss_pred HHHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhc----CCcEE
Q psy4974 238 SEVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQL----KFCQY 313 (345)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~----~~~~~ 313 (345)
.+... .........|+++.+|++|.+++. .+++++.+ -+.++
T Consensus 178 -----~~~~~---------------------------~~~~~~~~~~~~i~~G~~D~~~~~--~~~~~~~L~~~g~~~~~ 223 (255)
T d1jjfa_ 178 -----LFPDG---------------------------GKAAREKLKLLFIACGTNDSLIGF--GQRVHEYCVANNINHVY 223 (255)
T ss_dssp -----HCTTT---------------------------THHHHHHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCCCEE
T ss_pred -----ccccH---------------------------HHHhhccCCcceEEeCCCCCCchH--HHHHHHHHHHCCCCEEE
Confidence 00000 000011246899999999988763 34455444 26789
Q ss_pred EEeCCCCCccc
Q psy4974 314 YQFSSGGHSCH 324 (345)
Q Consensus 314 ~~~~~~gH~~~ 324 (345)
.+++++||...
T Consensus 224 ~~~~~ggH~~~ 234 (255)
T d1jjfa_ 224 WLIQGGGHDFN 234 (255)
T ss_dssp EEETTCCSSHH
T ss_pred EEECCCCcCHH
Confidence 99999999653
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.21 E-value=7.4e-10 Score=92.74 Aligned_cols=122 Identities=11% Similarity=0.016 Sum_probs=83.1
Q ss_pred cCceEEEEEcCCCCceEEEEcCcCCCc-hhhHHH---HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCC
Q psy4974 80 KGCDIRFIKYGSGAQVLFFTYGVLGEI-RNSFKK---QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSF 155 (345)
Q Consensus 80 ~g~~l~~~~~g~~~p~vv~lHG~~~~~-~~~~~~---~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~ 155 (345)
.|..+.+.....+.|+|+++||.++.. ...|.. +.+.+.+.++.|+.+|--. .+-+..+. .....
T Consensus 14 ~~r~~~~~v~~~~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~----------~~~y~~~~-~~~~~ 82 (267)
T d1r88a_ 14 MGRDIPVAFLAGGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGA----------YSMYTNWE-QDGSK 82 (267)
T ss_dssp TTEEEEEEEECCSSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCT----------TSTTSBCS-SCTTC
T ss_pred CCceeeEEEECCCCCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCC----------CcCCcccc-ccccc
Confidence 456677766666668999999976541 246655 5567778889999998422 00011111 11111
Q ss_pred CCccchHH-HHHHHHHHHHH-hC--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCC
Q psy4974 156 VPFQYIEE-DVDIAYELLKL-LG--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLT 216 (345)
Q Consensus 156 ~~~~~~~~-~~~~~~~~l~~-~~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 216 (345)
.+++ ..+++..++++ +. .+++.+.|+||||+.|+.+|.++|+++.+++.+++.....
T Consensus 83 ----~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~~ 143 (267)
T d1r88a_ 83 ----QWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPS 143 (267)
T ss_dssp ----BHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTT
T ss_pred ----cHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCCC
Confidence 3333 35567766654 33 3589999999999999999999999999999999876643
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.17 E-value=1.2e-09 Score=92.44 Aligned_cols=122 Identities=8% Similarity=-0.016 Sum_probs=78.6
Q ss_pred CceEEEEEc--CCCCceEEEEcCcCCCc-hhhHHH---HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCC
Q psy4974 81 GCDIRFIKY--GSGAQVLFFTYGVLGEI-RNSFKK---QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRS 154 (345)
Q Consensus 81 g~~l~~~~~--g~~~p~vv~lHG~~~~~-~~~~~~---~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~ 154 (345)
|.++.+... +...|+|+++||.+++. ...|.. +.+.+.+.|+.++.++..+ .+........
T Consensus 20 ~r~~~~~v~~p~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~-------------~~~~~~~~~~ 86 (288)
T d1sfra_ 20 GRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQ-------------SSFYSDWYQP 86 (288)
T ss_dssp TEEEEEEEECCSTTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCT-------------TCTTCBCSSC
T ss_pred CcEEEEEEeCCCCCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCC-------------CCCCccccCc
Confidence 444444332 33448999999987651 134533 4567778899999999877 3322111100
Q ss_pred C--C----CccchHHHHHHHHHHHHH-hC--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCC
Q psy4974 155 F--V----PFQYIEEDVDIAYELLKL-LG--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFL 215 (345)
Q Consensus 155 ~--~----~~~~~~~~~~~~~~~l~~-~~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 215 (345)
. . ........++++..++++ +. .+++.++|+|+||..|+.++.++|+++.+++.+++....
T Consensus 87 ~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~~ 156 (288)
T d1sfra_ 87 ACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDP 156 (288)
T ss_dssp EEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCT
T ss_pred ccccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCcccc
Confidence 0 0 011122235566655543 33 347999999999999999999999999999999987653
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.08 E-value=6.2e-09 Score=91.77 Aligned_cols=124 Identities=10% Similarity=-0.026 Sum_probs=80.0
Q ss_pred EEE-cCceEEEEEc---CCCC-ceEEEEcCcCCC-----------chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCC
Q psy4974 77 FSI-KGCDIRFIKY---GSGA-QVLFFTYGVLGE-----------IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGK 140 (345)
Q Consensus 77 ~~~-~g~~l~~~~~---g~~~-p~vv~lHG~~~~-----------~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~ 140 (345)
|.. ||++|+...+ +.++ |+||+.|+.+.. ...........|+++||.|+.+|.||
T Consensus 33 ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG--------- 103 (385)
T d2b9va2 33 VPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRG--------- 103 (385)
T ss_dssp EECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTT---------
T ss_pred EECCCCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCc---------
Confidence 444 8999886544 4444 677777765321 01122334567889999999999999
Q ss_pred ccCCCCCCCCCCCCCC---------CccchHHHHHHHHHHHHHh-CC--ccEEEEEeChhHHHHHHHHHhCCcccceeeE
Q psy4974 141 TCSGYGQSLPKGRSFV---------PFQYIEEDVDIAYELLKLL-GV--CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVI 208 (345)
Q Consensus 141 ~~~~~G~s~~~~~~~~---------~~~~~~~~~~~~~~~l~~~-~~--~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 208 (345)
.|.|......+. ..... +...++.+++... .. .+|.++|+|+||.+++.+|...|+.+++++.
T Consensus 104 ----~g~S~G~~~~~~~~~~~~~~~~~~e~-~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~ 178 (385)
T d2b9va2 104 ----KYGSQGDYVMTRPPHGPLNPTKTDET-TDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAP 178 (385)
T ss_dssp ----STTCCSCCCTTCCCSBTTBCSSCCHH-HHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEE
T ss_pred ----ccCCCCceeeccccccccccchhhHH-HHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEE
Confidence 998865432110 11112 2233333333332 23 3899999999999999999998888999998
Q ss_pred eccCCC
Q psy4974 209 WGTKSF 214 (345)
Q Consensus 209 ~~~~~~ 214 (345)
..+...
T Consensus 179 ~~~~~d 184 (385)
T d2b9va2 179 ESPMVD 184 (385)
T ss_dssp EEECCC
T ss_pred eccccc
Confidence 876543
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.95 E-value=2.1e-10 Score=94.95 Aligned_cols=116 Identities=13% Similarity=0.173 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHh---C--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHH
Q psy4974 164 DVDIAYELLKLL---G--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARS 238 (345)
Q Consensus 164 ~~~~~~~~l~~~---~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (345)
..+++..+++.. . .+++.++|+|+||..|+.++.++|+++.+++.+++..........
T Consensus 104 ~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~~~~~~~~----------------- 166 (246)
T d3c8da2 104 VQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQ----------------- 166 (246)
T ss_dssp HHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTTSS-----------------
T ss_pred HHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccccccCCcc-----------------
Confidence 345555555553 1 247899999999999999999999999999999996553211100
Q ss_pred HHHHHcccCCchhhhhHHHHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC----CcEEE
Q psy4974 239 EVLKAYDNDVNYITGIFNQYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK----FCQYY 314 (345)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~----~~~~~ 314 (345)
. ...... ............|+++.+|+.|..+ ....+++++.+. ..++.
T Consensus 167 --------~----~~~~~~--------------~~~~~~~~~~~~~~~l~~G~~D~~~-~~~~~~l~~~L~~~g~~~~~~ 219 (246)
T d3c8da2 167 --------Q----EGVLLE--------------KLKAGEVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWR 219 (246)
T ss_dssp --------S----CCHHHH--------------HHHTTSSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEE
T ss_pred --------c----hHHHHH--------------HhhhhhhhccCCCeEEEecCCCcch-hHHHHHHHHHHHHCCCCEEEE
Confidence 0 000000 0012234456789999999999866 356677777663 46888
Q ss_pred EeCCCCCccc
Q psy4974 315 QFSSGGHSCH 324 (345)
Q Consensus 315 ~~~~~gH~~~ 324 (345)
+++| ||...
T Consensus 220 ~~~G-gH~~~ 228 (246)
T d3c8da2 220 QVDG-GHDAL 228 (246)
T ss_dssp EESC-CSCHH
T ss_pred EeCC-CCChH
Confidence 8985 89643
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.95 E-value=2e-10 Score=95.52 Aligned_cols=103 Identities=13% Similarity=0.077 Sum_probs=72.5
Q ss_pred eEEEEcCcCCCc--hhhHHHHHHhhCCC--CeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHH
Q psy4974 95 VLFFTYGVLGEI--RNSFKKQLTAFDPK--LFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYE 170 (345)
Q Consensus 95 ~vv~lHG~~~~~--~~~~~~~~~~L~~~--G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
|||++||++++. ...|..+.+.|.+. |+.|+++++.. ...+..... -...+.+.++.+.+
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~-------------~~~~~~~~~---~~~~~~~~~e~v~~ 70 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGK-------------TLREDVENS---FFLNVNSQVTTVCQ 70 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSS-------------SHHHHHHHH---HHSCHHHHHHHHHH
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCC-------------Ccccccccc---hhhhHHHHHHHHHH
Confidence 899999998752 24677777777654 79999999765 322210000 01235566666666
Q ss_pred HHHHh--CCccEEEEEeChhHHHHHHHHHhCCc-ccceeeEeccCC
Q psy4974 171 LLKLL--GVCKVSLFGWCDGGHLSFVFSMKYPH-MVHKLVIWGTKS 213 (345)
Q Consensus 171 ~l~~~--~~~~i~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~ 213 (345)
.+++. +.+++.+|||||||.++..++.+.+. .|..+|.++++-
T Consensus 71 ~I~~~~~~~~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH 116 (279)
T d1ei9a_ 71 ILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp HHHSCGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred HHHhccccccceeEEEEccccHHHHHHHHHcCCCCcceEEEECCCC
Confidence 66543 23589999999999999999999874 599999999854
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.92 E-value=1.2e-09 Score=93.00 Aligned_cols=106 Identities=10% Similarity=0.046 Sum_probs=68.9
Q ss_pred CCCCceEEEEcCcCCCchhhHHH-HH-HhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC-CccchHHHHH
Q psy4974 90 GSGAQVLFFTYGVLGEIRNSFKK-QL-TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV-PFQYIEEDVD 166 (345)
Q Consensus 90 g~~~p~vv~lHG~~~~~~~~~~~-~~-~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~-~~~~~~~~~~ 166 (345)
...+|++|++|||.++....|.. +. ..|...+++|+++|+.. .. + ..|. .........+
T Consensus 67 ~~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~-------------~a-~----~~Y~~a~~n~~~Vg~ 128 (337)
T d1rp1a2 67 QTDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKK-------------GS-Q----TSYTQAANNVRVVGA 128 (337)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHH-------------HH-S----SCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeecc-------------cc-C----cchHHHHHHHHHHHH
Confidence 34668999999998875444543 44 44555569999999965 21 1 1110 1111222233
Q ss_pred HHHHH----HHHhC--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 167 IAYEL----LKLLG--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 167 ~~~~~----l~~~~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
.+.++ ++..+ .++++|||||+||.+|-.++.+. .++.+++.++|+..
T Consensus 129 ~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhvAG~aG~~~-~~l~rItgLDPA~P 181 (337)
T d1rp1a2 129 QVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRT-PGLGRITGLDPVEA 181 (337)
T ss_dssp HHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTS-TTCCEEEEESCCCT
T ss_pred HHHHHHHHHHHhcCCChhheEEEeecHHHhhhHHHHHhh-ccccceeccCCCcc
Confidence 33333 44444 46999999999999998666544 57999999999765
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.88 E-value=2.1e-09 Score=91.28 Aligned_cols=106 Identities=12% Similarity=0.033 Sum_probs=71.7
Q ss_pred CCCceEEEEcCcCCCchhhHHH-HH-HhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCC-CccchHHHHHH
Q psy4974 91 SGAQVLFFTYGVLGEIRNSFKK-QL-TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFV-PFQYIEEDVDI 167 (345)
Q Consensus 91 ~~~p~vv~lHG~~~~~~~~~~~-~~-~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~-~~~~~~~~~~~ 167 (345)
..+|++|++|||.++....|.. +. .+|....++|+++|+.. .. + ..|. .........+.
T Consensus 68 ~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~-------------~a-~----~~Y~~a~~n~~~Vg~~ 129 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRR-------------GS-R----TEYTQASYNTRVVGAE 129 (338)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHH-------------HH-S----SCHHHHHHHHHHHHHH
T ss_pred CCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechh-------------hc-c----cchHHHHHhHHHHHHH
Confidence 4568999999998874344443 33 45555569999999966 21 1 1120 11122223333
Q ss_pred HHHHH----HHhC--CccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 168 AYELL----KLLG--VCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 168 ~~~~l----~~~~--~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
+..++ +..+ .++++|||||+||.+|-.++...+.++.+++.++|+..
T Consensus 130 ia~~i~~l~~~~g~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P 182 (338)
T d1bu8a2 130 IAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (338)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HHHHHHHHHHhcCCCcceeEEEeccHHHHHHHHHHHhhccccccccccccCcC
Confidence 33333 3334 46999999999999999999988888999999999765
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.83 E-value=8.9e-08 Score=79.69 Aligned_cols=39 Identities=10% Similarity=0.137 Sum_probs=35.0
Q ss_pred CCccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCC
Q psy4974 176 GVCKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSF 214 (345)
Q Consensus 176 ~~~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 214 (345)
+.+++.+.|+|+||..|+.+|.++|+.+.+++.+++...
T Consensus 142 d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~~ 180 (273)
T d1wb4a1 142 SRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYW 180 (273)
T ss_dssp TGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCC
T ss_pred CccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCcccc
Confidence 335799999999999999999999999999999998654
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.81 E-value=8.3e-08 Score=80.97 Aligned_cols=121 Identities=11% Similarity=0.005 Sum_probs=68.6
Q ss_pred ceEEEEcCcCCCchhhHHHH---HHhhCCCCeEEEEeCCCCchhhhccCCcc-CC--CCCCCCCCCC---CCCccchHH-
Q psy4974 94 QVLFFTYGVLGEIRNSFKKQ---LTAFDPKLFTSIFWDPPGNVVLYLLGKTC-SG--YGQSLPKGRS---FVPFQYIEE- 163 (345)
Q Consensus 94 p~vv~lHG~~~~~~~~~~~~---~~~L~~~G~~vi~~D~~G~~~~~~~g~~~-~~--~G~s~~~~~~---~~~~~~~~~- 163 (345)
|+|+++||.+++ ...|... .+...+.|..|+.++......+.-.+... .. .+.+-..+.. +.....+++
T Consensus 50 PVLYlLhG~~~~-~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~ 128 (299)
T d1pv1a_ 50 PTVFYLSGLTCT-PDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDY 128 (299)
T ss_dssp CEEEEECCTTCC-HHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHHH
T ss_pred CEEEEcCCCCCC-HHHHHHhhhHHHHHHHcCCceecCCCcccccccCCcccccccccCCCccccccccCCcccccchHHH
Confidence 799999999998 4888542 23344457888888754311111111100 00 1111000000 000002222
Q ss_pred HHHHHHHHHHH-hCC---------ccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCCC
Q psy4974 164 DVDIAYELLKL-LGV---------CKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSFL 215 (345)
Q Consensus 164 ~~~~~~~~l~~-~~~---------~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~ 215 (345)
..+++..++++ +.. ++..|.||||||.-|+.+|.++ |++..+++..++....
T Consensus 129 i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~~~ 192 (299)
T d1pv1a_ 129 IHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNP 192 (299)
T ss_dssp HHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCCCS
T ss_pred HHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCcCCc
Confidence 34556655554 222 3689999999999999999864 7888888888876553
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.80 E-value=6.7e-07 Score=80.13 Aligned_cols=125 Identities=14% Similarity=0.157 Sum_probs=80.3
Q ss_pred eeeEEE-cCceEEEEEcCC-----CCceEEEEcCcCCCchhhHHHHHHh----hCCCC-------------eEEEEeCCC
Q psy4974 74 EGFFSI-KGCDIRFIKYGS-----GAQVLFFTYGVLGEIRNSFKKQLTA----FDPKL-------------FTSIFWDPP 130 (345)
Q Consensus 74 ~~~~~~-~g~~l~~~~~g~-----~~p~vv~lHG~~~~~~~~~~~~~~~----L~~~G-------------~~vi~~D~~ 130 (345)
..++++ ++..++|.-... .+|.++++-|++|++ ..|-.+.+. +...| .+++-+|.|
T Consensus 23 sGyl~~~~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~S-S~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDqP 101 (452)
T d1ivya_ 23 SGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCS-SLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESP 101 (452)
T ss_dssp EEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBC-THHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCS
T ss_pred eeeeecCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHH-HHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEecC
Confidence 567777 556777765432 347999999999996 777544321 11111 579999975
Q ss_pred -CchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH----HHHHHh---CCccEEEEEeChhHHHHHHHHHh----
Q psy4974 131 -GNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY----ELLKLL---GVCKVSLFGWCDGGHLSFVFSMK---- 198 (345)
Q Consensus 131 -G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~----~~l~~~---~~~~i~lvGhS~Gg~ia~~~a~~---- 198 (345)
| .|.|......+ ..+..+.+.++. ++++.. ...+++|+|-|.||..+..+|..
T Consensus 102 vG-------------tGfS~~~~~~~--~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~ 166 (452)
T d1ivya_ 102 AG-------------VGFSYSDDKFY--ATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQD 166 (452)
T ss_dssp TT-------------STTCEESSCCC--CCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTC
T ss_pred CC-------------cccccCCCCCC--CCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhc
Confidence 8 88775433322 123344444444 444443 33589999999999988887754
Q ss_pred CCcccceeeEeccCCC
Q psy4974 199 YPHMVHKLVIWGTKSF 214 (345)
Q Consensus 199 ~p~~v~~lvl~~~~~~ 214 (345)
.+-.++++++.++...
T Consensus 167 ~~i~l~Gi~igng~~d 182 (452)
T d1ivya_ 167 PSMNLQGLAVGNGLSS 182 (452)
T ss_dssp TTSCEEEEEEESCCSB
T ss_pred CcccccceEcCCCccC
Confidence 2235899999988665
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.77 E-value=1.8e-08 Score=85.57 Aligned_cols=122 Identities=13% Similarity=0.130 Sum_probs=71.4
Q ss_pred ccEEEEEeChhHHHHHHHHHhCCcccce-eeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHH
Q psy4974 178 CKVSLFGWCDGGHLSFVFSMKYPHMVHK-LVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFN 256 (345)
Q Consensus 178 ~~i~lvGhS~Gg~ia~~~a~~~p~~v~~-lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (345)
++|.++|+|.||++|+.++..+|+.+++ +.++++.+............+.. .. ....
T Consensus 11 ~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg~p~~ca~~~~~~~~~~~-----------------~~---~~~~-- 68 (318)
T d2d81a1 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYN-----------------GY---PSIT-- 68 (318)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSCGGGGSTT-----------------CC---CCCH--
T ss_pred cceEEEEECHHHHHHHHHHHhcccceeeeEEEeccCchhhhcccchHHHhhc-----------------CC---CCCc--
Confidence 4899999999999999999999999874 44455443321111000000000 00 0000
Q ss_pred HHHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCCCCCCChHHHHHHHhhcC------CcEEEEeCCCCCcccc
Q psy4974 257 QYVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSADDVMVSTQQVQSLLNQLK------FCQYYQFSSGGHSCHI 325 (345)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~v~~~~~~~~~~~~~------~~~~~~~~~~gH~~~~ 325 (345)
......... ..............|++++||++|.+||+..++.+.+.+. +++++..+++||.+..
T Consensus 69 -~~~~~~~~~---~~~~i~~~~~~~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT 139 (318)
T d2d81a1 69 -TPTANMKSW---SGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPT 139 (318)
T ss_dssp -HHHHHHHHH---BTTTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEE
T ss_pred -ChhHHHHHH---hhcCCcchhccCCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCC
Confidence 000000000 0000111111235799999999999999999988888763 3577888999998754
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.67 E-value=4.6e-06 Score=73.81 Aligned_cols=123 Identities=15% Similarity=0.176 Sum_probs=78.1
Q ss_pred eeeEEEc--CceEEEEEcC-----CCCceEEEEcCcCCCchhhHHHHHHh-----------------hCCCCeEEEEeCC
Q psy4974 74 EGFFSIK--GCDIRFIKYG-----SGAQVLFFTYGVLGEIRNSFKKQLTA-----------------FDPKLFTSIFWDP 129 (345)
Q Consensus 74 ~~~~~~~--g~~l~~~~~g-----~~~p~vv~lHG~~~~~~~~~~~~~~~-----------------L~~~G~~vi~~D~ 129 (345)
..++.++ +..++|.-.. ..+|.||++-|++|++ ..|-.+.+. +.+. .+++.+|.
T Consensus 18 sGyl~v~~~~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~S-S~~g~~~e~GP~~i~~~~~~~~N~~sW~~~-anllfiD~ 95 (421)
T d1wpxa1 18 TGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCS-SLTGLFFELGPSSIGPDLKPIGNPYSWNSN-ATVIFLDQ 95 (421)
T ss_dssp EEEEECTTSCCEEEEEEECCSSCTTTSCEEEEECCTTTBC-THHHHHHTTSSEEECTTSCEEECTTCGGGS-SEEEEECC
T ss_pred eeeeecCCCCceEEEEEEEeCCCCCCCCEEEEECCCCcHH-HHHHHHHhcCCcEECCCCccccCCcccccc-cCEEEEec
Confidence 5677773 4677776432 2348999999999996 677555421 1122 67999994
Q ss_pred -CCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHHH----HHh-----CCccEEEEEeChhHHHHHHHHHhC
Q psy4974 130 -PGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYELL----KLL-----GVCKVSLFGWCDGGHLSFVFSMKY 199 (345)
Q Consensus 130 -~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~l----~~~-----~~~~i~lvGhS~Gg~ia~~~a~~~ 199 (345)
.| .|.|-...... .+-.+.++++.+++ +.. ...+++|.|-|.||..+..+|.+.
T Consensus 96 PvG-------------tGfSy~~~~~~---~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i 159 (421)
T d1wpxa1 96 PVN-------------VGFSYSGSSGV---SNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEI 159 (421)
T ss_dssp STT-------------STTCBCSSCCC---CSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHH
T ss_pred CCC-------------CCceecCCccc---cchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHH
Confidence 47 77774332222 13334445554444 332 234899999999999888877542
Q ss_pred ------CcccceeeEeccCCC
Q psy4974 200 ------PHMVHKLVIWGTKSF 214 (345)
Q Consensus 200 ------p~~v~~lvl~~~~~~ 214 (345)
+-.++++++.++...
T Consensus 160 ~~~~~~~inlkGi~iGng~~d 180 (421)
T d1wpxa1 160 LSHKDRNFNLTSVLIGNGLTD 180 (421)
T ss_dssp HHCSSCSSCCCEEEEESCCCC
T ss_pred HHccCCCcceeeeEecCCccc
Confidence 234789999888554
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.66 E-value=6.1e-08 Score=80.46 Aligned_cols=110 Identities=13% Similarity=0.156 Sum_probs=66.4
Q ss_pred ccEEEEEeChhHHHHHHHHHhCCcccceeeEeccCCCCCchhHHHHHHhHhccCCChhhHHHHHHHcccCCchhhhhHHH
Q psy4974 178 CKVSLFGWCDGGHLSFVFSMKYPHMVHKLVIWGTKSFLTIDNVRVFEGMRRLSNWSPMARSEVLKAYDNDVNYITGIFNQ 257 (345)
Q Consensus 178 ~~i~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (345)
+++.|+|||+||..++.++.+. +.+.+++.++|....... .+.....
T Consensus 141 ~~~~i~G~S~GG~~a~~~~~~~-~~f~~~~a~s~~~~~~~~--------------------~~~~~~~------------ 187 (265)
T d2gzsa1 141 QRRGLWGHSYGGLFVLDSWLSS-SYFRSYYSASPSLGRGYD--------------------ALLSRVT------------ 187 (265)
T ss_dssp EEEEEEEETHHHHHHHHHHHHC-SSCSEEEEESGGGSTTHH--------------------HHHHHHH------------
T ss_pred CceEEEeccHHHHHHHHHHHcC-cccCEEEEECCcccccch--------------------hhhhccc------------
Confidence 3688999999999999877654 567788877765432100 0000000
Q ss_pred HHHHHHHHHHhhCchhhhccCCCCCCCEEEEEeCC--------CCCCChHHHHHHHhhc----CCcEEEEeCCCCCcccc
Q psy4974 258 YVDMVNLIFKSYGRNVYQELLPYVDVPVLVFHSAD--------DVMVSTQQVQSLLNQL----KFCQYYQFSSGGHSCHI 325 (345)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~--------D~~v~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~ 325 (345)
........+.|+++.+|+. |..++....+++.+.+ .+.++.+++|++|...
T Consensus 188 ----------------~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~~~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~~- 250 (265)
T d2gzsa1 188 ----------------AVEPLQFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPM- 250 (265)
T ss_dssp ----------------TSCTTTTTTCEEEEEECCC-----------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHH-
T ss_pred ----------------cccccccCCCcEEEEcCCcccccccccccchhHHHHHHHHHHHHHCCCCEEEEEcCCCCcchH-
Confidence 0112234456888888877 4556666677776655 3678999999999643
Q ss_pred cChHHHHHHHHHH
Q psy4974 326 KHGQVFNEISRNF 338 (345)
Q Consensus 326 ~~~~~~~~~i~~f 338 (345)
.+..+.+.|+..
T Consensus 251 -~~~s~~~~l~~l 262 (265)
T d2gzsa1 251 -FNASFRQALLDI 262 (265)
T ss_dssp -HHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHH
Confidence 244555554443
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.45 E-value=8.1e-08 Score=83.31 Aligned_cols=97 Identities=12% Similarity=0.001 Sum_probs=70.8
Q ss_pred ceEEEEcCcCCCc------hhhHHH----HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHH
Q psy4974 94 QVLFFTYGVLGEI------RNSFKK----QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEE 163 (345)
Q Consensus 94 p~vv~lHG~~~~~------~~~~~~----~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~ 163 (345)
-||||+||+.|-. ...|.. +.+.|.+.|++|++...+. . .+.++
T Consensus 8 yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p-------------~-------------~S~~~ 61 (388)
T d1ku0a_ 8 APIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGP-------------L-------------SSNWD 61 (388)
T ss_dssp CCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCS-------------S-------------BCHHH
T ss_pred CCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCC-------------c-------------cCHHH
Confidence 4899999987642 134543 6778888999999998755 2 25566
Q ss_pred HHHHHHHHHHHh----C-------------------------CccEEEEEeChhHHHHHHHHHhCCc-------------
Q psy4974 164 DVDIAYELLKLL----G-------------------------VCKVSLFGWCDGGHLSFVFSMKYPH------------- 201 (345)
Q Consensus 164 ~~~~~~~~l~~~----~-------------------------~~~i~lvGhS~Gg~ia~~~a~~~p~------------- 201 (345)
-++.+...++.. | .+||+||||||||..+-+++...|+
T Consensus 62 RA~eL~~~I~~~~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~ 141 (388)
T d1ku0a_ 62 RACEAYAQLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHN 141 (388)
T ss_dssp HHHHHHHHHHCEEEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhhhhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccc
Confidence 677777766632 1 1489999999999999998875443
Q ss_pred ------------ccceeeEeccCCCCC
Q psy4974 202 ------------MVHKLVIWGTKSFLT 216 (345)
Q Consensus 202 ------------~v~~lvl~~~~~~~~ 216 (345)
.|+.++.++++-...
T Consensus 142 ~~~~~l~~~~~~~V~SvTTIsTPH~GS 168 (388)
T d1ku0a_ 142 VSLSPLFEGGHRFVLSVTTIATPHDGT 168 (388)
T ss_dssp CCCCGGGTCCCCCEEEEEEESCCTTCC
T ss_pred cccccccccCCcceEEEEeccCCCCCc
Confidence 599999999865543
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.16 E-value=5.1e-05 Score=68.08 Aligned_cols=61 Identities=13% Similarity=0.264 Sum_probs=51.6
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHhhcC-------------------------------------CcEEEEeCCCCCccc
Q psy4974 282 DVPVLVFHSADDVMVSTQQVQSLLNQLK-------------------------------------FCQYYQFSSGGHSCH 324 (345)
Q Consensus 282 ~~Pvl~i~G~~D~~v~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~gH~~~ 324 (345)
.++||+.+|+.|.+++....+.+.+.++ +.++..+.++||++.
T Consensus 372 girVLIy~Gd~D~icn~~Gte~~i~~L~w~g~~~f~~~~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~V~~AGHmvP 451 (483)
T d1ac5a_ 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CCEEEEEECChhhcCCCHHHHHHHHhCCCccccccccCccccccccccccccCCcEEEEEEEEeCCeEEEEECCccccCc
Confidence 4799999999999999877777665431 346778899999999
Q ss_pred ccChHHHHHHHHHHHHhh
Q psy4974 325 IKHGQVFNEISRNFILEE 342 (345)
Q Consensus 325 ~~~~~~~~~~i~~fl~~~ 342 (345)
.++|++..+.|..||+..
T Consensus 452 ~dqP~~a~~mi~~fl~~~ 469 (483)
T d1ac5a_ 452 FDKSLVSRGIVDIYSNDV 469 (483)
T ss_dssp HHCHHHHHHHHHHHTTCC
T ss_pred ccCHHHHHHHHHHHhCCc
Confidence 999999999999999764
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=97.25 E-value=0.00015 Score=64.90 Aligned_cols=117 Identities=10% Similarity=-0.058 Sum_probs=65.7
Q ss_pred CceEEEEcCcCCC--chhhHHH-HHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 93 AQVLFFTYGVLGE--IRNSFKK-QLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 93 ~p~vv~lHG~~~~--~~~~~~~-~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
.|++|+|||++.. +...+.. ....+.+.+.-|+.+++|- -.-|+.+..-+.. .....+ .+.+.....++|.
T Consensus 96 lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRl----g~~GFl~~~~~~~-~~~gN~-Gl~Dq~~AL~WV~ 169 (483)
T d1qe3a_ 96 LPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRL----GPFGFLHLSSFDE-AYSDNL-GLLDQAAALKWVR 169 (483)
T ss_dssp EEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCC----HHHHSCCCTTTCT-TSCSCH-HHHHHHHHHHHHH
T ss_pred CceEEEEeecccccCCccccccccccccccCceEEEeecccc----cchhhcccccccc-cccccc-ccHHHHHHHHHHH
Confidence 4899999998632 1121111 1122233359999999986 1122221001111 112233 2223333344555
Q ss_pred HHHHHhCCc--cEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCCC
Q psy4974 170 ELLKLLGVC--KVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSFL 215 (345)
Q Consensus 170 ~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~ 215 (345)
+-+..+|-+ +|.|+|||.||..+..+.... ...+.++|+.++....
T Consensus 170 ~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~~ 219 (483)
T d1qe3a_ 170 ENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRT 219 (483)
T ss_dssp HHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCC
T ss_pred HHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCccc
Confidence 556666644 899999999998877766532 2478999999886543
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=97.20 E-value=0.00027 Score=64.10 Aligned_cols=116 Identities=10% Similarity=0.030 Sum_probs=63.1
Q ss_pred CCceEEEEcCcCCC--chhhH--HHHH--HhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHH
Q psy4974 92 GAQVLFFTYGVLGE--IRNSF--KKQL--TAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDV 165 (345)
Q Consensus 92 ~~p~vv~lHG~~~~--~~~~~--~~~~--~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~ 165 (345)
+.|++|+|||++-. +...| ..+. ..+..++.-||.+++|- | .-|+.+.+. .+......+ .+.+.....
T Consensus 113 ~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRL-g---~~GFl~~~~-~~~~~~gN~-Gl~Dq~~AL 186 (534)
T d1llfa_ 113 NLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRV-A---SWGFLAGDD-IKAEGSGNA-GLKDQRLGM 186 (534)
T ss_dssp CEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCC-H---HHHHCCSHH-HHHHTCTTH-HHHHHHHHH
T ss_pred CCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCC-C---cccccCCcc-ccccccccc-chhHHHHHH
Confidence 34899999998742 11222 2222 33556679999999985 1 111110000 000112223 222222334
Q ss_pred HHHHHHHHHhCCc--cEEEEEeChhHHHHH-HHHHhC----C---cccceeeEeccCC
Q psy4974 166 DIAYELLKLLGVC--KVSLFGWCDGGHLSF-VFSMKY----P---HMVHKLVIWGTKS 213 (345)
Q Consensus 166 ~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~-~~a~~~----p---~~v~~lvl~~~~~ 213 (345)
+++.+-+..+|-+ +|.|+|||.||..+. ++.... | ..+.++|+.++..
T Consensus 187 ~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 187 QWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred HHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 4555555566644 899999999998554 444221 1 2588999998754
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.16 E-value=0.00024 Score=64.49 Aligned_cols=114 Identities=13% Similarity=0.063 Sum_probs=63.3
Q ss_pred CceEEEEcCcCC---Cc-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 93 AQVLFFTYGVLG---EI-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 93 ~p~vv~lHG~~~---~~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.|++|+|||++- ++ ...+.... ..++.+.-|+.+++|- |. -|+.+ .+........+ .+.+.....++|
T Consensus 112 lPV~v~ihGG~~~~gs~~~~~~~~~~-~~~~~~vvvVt~nYRl-g~---~Gfl~--~~~~~~~~gN~-Gl~Dq~~AL~WV 183 (542)
T d2ha2a1 112 TPVLIWIYGGGFYSGAASLDVYDGRF-LAQVEGAVLVSMNYRV-GT---FGFLA--LPGSREAPGNV-GLLDQRLALQWV 183 (542)
T ss_dssp EEEEEEECCSTTTCCCTTSGGGCTHH-HHHHHCCEEEEECCCC-HH---HHHCC--CTTCSSCCSCH-HHHHHHHHHHHH
T ss_pred CcEEEEEEECccccccCcccccCchh-hhhhccceeEeeeeec-cc---eeeec--ccccccCCCcC-CcccHHHHHHHH
Confidence 389999999763 21 12222211 1223469999999984 01 11110 01111112233 222222234445
Q ss_pred HHHHHHhCCc--cEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 169 YELLKLLGVC--KVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 169 ~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
.+-+..+|-+ +|.|+|+|.||..+..+.... ...+.++|+.++...
T Consensus 184 ~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~~ 233 (542)
T d2ha2a1 184 QENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPN 233 (542)
T ss_dssp HHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCSS
T ss_pred HHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeeccccC
Confidence 5555566644 899999999998887766543 246888999887544
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=97.07 E-value=0.00029 Score=63.81 Aligned_cols=115 Identities=10% Similarity=0.043 Sum_probs=63.6
Q ss_pred CCceEEEEcCcCC---C-chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHH
Q psy4974 92 GAQVLFFTYGVLG---E-IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDI 167 (345)
Q Consensus 92 ~~p~vv~lHG~~~---~-~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~ 167 (345)
+.|++|+|||++- + ....+.. ...+++.+.-||.+++|- | .-|+.+ .+........+ .+.+.....++
T Consensus 105 ~lPV~v~ihGG~~~~g~~~~~~~~~-~~~~~~~~vvvVt~nYRl-g---~~GFl~--~~~~~~~~gN~-Gl~Dq~~AL~W 176 (532)
T d1ea5a_ 105 STTVMVWIYGGGFYSGSSTLDVYNG-KYLAYTEEVVLVSLSYRV-G---AFGFLA--LHGSQEAPGNV-GLLDQRMALQW 176 (532)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCT-HHHHHHHTCEEEECCCCC-H---HHHHCC--CTTCSSSCSCH-HHHHHHHHHHH
T ss_pred CCcEEEEEEcCCcccccCCccccCc-chhhcccCccEEEEeecc-c---cccccc--cccccCCCCcc-cchhHHHHHHH
Confidence 3489999999752 2 1122221 112334469999999985 1 111110 01111122233 22222223444
Q ss_pred HHHHHHHhCCc--cEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 168 AYELLKLLGVC--KVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 168 ~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
+.+-+..+|-+ +|.|+|+|.||..+..+.... ...+.++|+.++...
T Consensus 177 V~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 177 VHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp HHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred HHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence 45555566644 899999999998776665532 246889998887654
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.04 E-value=0.00047 Score=62.24 Aligned_cols=114 Identities=11% Similarity=0.052 Sum_probs=62.8
Q ss_pred CceEEEEcCcCCC----chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHH
Q psy4974 93 AQVLFFTYGVLGE----IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIA 168 (345)
Q Consensus 93 ~p~vv~lHG~~~~----~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~ 168 (345)
.|++|+|||++.. ....+.... ..++.+.-|+.+++|- | ..|+.+ +.........+ .+.+.....++|
T Consensus 104 ~PV~v~ihGG~~~~gs~~~~~~~~~~-~~~~~~vVvVt~nYRl-g---~~Gfl~--~~~~~~~~gN~-Gl~Dq~~AL~WV 175 (526)
T d1p0ia_ 104 ATVLIWIYGGGFQTGTSSLHVYDGKF-LARVERVIVVSMNYRV-G---ALGFLA--LPGNPEAPGNM-GLFDQQLALQWV 175 (526)
T ss_dssp EEEEEEECCSTTTSCCTTCGGGCTHH-HHHHHCCEEEEECCCC-H---HHHHCC--CTTCTTSCSCH-HHHHHHHHHHHH
T ss_pred CceEEEEECCCcccccCcccccCccc-cccccceeEEeccccc-c---cccccC--CCCcccccccc-cccchhhhhhhH
Confidence 3899999997732 112222211 1123469999999985 1 111110 00011112333 222222334445
Q ss_pred HHHHHHhCCc--cEEEEEeChhHHHHHHHHHh--CCcccceeeEeccCCC
Q psy4974 169 YELLKLLGVC--KVSLFGWCDGGHLSFVFSMK--YPHMVHKLVIWGTKSF 214 (345)
Q Consensus 169 ~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 214 (345)
.+-++.+|-+ +|.|+|+|.||..+..+... ....+.++|+.++...
T Consensus 176 ~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 176 QKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 225 (526)
T ss_dssp HHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred HHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhccccccc
Confidence 5555666644 89999999999887655442 2346888888876544
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.99 E-value=0.00029 Score=63.73 Aligned_cols=112 Identities=12% Similarity=0.099 Sum_probs=64.1
Q ss_pred ceEEEEcCcCCC--chhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q psy4974 94 QVLFFTYGVLGE--IRNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAYEL 171 (345)
Q Consensus 94 p~vv~lHG~~~~--~~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
|++|+|||++-. +...+.. ...++..+.-||.+++|- -.-|+.+. +.. .....+ .+.+.....++|.+-
T Consensus 114 PV~v~ihGG~~~~gs~~~~~~-~~~~~~~~vIvVt~nYRL----g~~GFl~~--~~~-~~~gN~-Gl~Dq~~AL~WV~~n 184 (532)
T d2h7ca1 114 PVMVWIHGGGLMVGAASTYDG-LALAAHENVVVVTIQYRL----GIWGFFST--GDE-HSRGNW-GHLDQVAALRWVQDN 184 (532)
T ss_dssp EEEEEECCSTTTSCCSTTSCC-HHHHHHHTCEEEEECCCC----HHHHHCCC--SST-TCCCCH-HHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCcccccccccCCc-hhhhhcCceEEEEEeecc----CCCccccc--ccc-cccccc-ccHHHHHHHHHHHHH
Confidence 899999997643 1122321 122344569999999986 11122111 111 112233 222222334445555
Q ss_pred HHHhCCc--cEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 172 LKLLGVC--KVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 172 l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
|..+|-+ +|.|+|+|.||..+..+.... ...+.++|+.++...
T Consensus 185 I~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~~ 231 (532)
T d2h7ca1 185 IASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 231 (532)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhccccc
Confidence 5566644 899999999998777665532 246889999887543
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=96.89 E-value=0.00071 Score=61.38 Aligned_cols=114 Identities=11% Similarity=0.069 Sum_probs=63.0
Q ss_pred CceEEEEcCcCCCc--hhhH--HHHH-Hh-hCCCCeEEEEeCCCCchhhhccCCccCCCCC-CCCCCCCCCCccchHHHH
Q psy4974 93 AQVLFFTYGVLGEI--RNSF--KKQL-TA-FDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQ-SLPKGRSFVPFQYIEEDV 165 (345)
Q Consensus 93 ~p~vv~lHG~~~~~--~~~~--~~~~-~~-L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~-s~~~~~~~~~~~~~~~~~ 165 (345)
.|++|+|||++-.. ...+ ..+. .. ....+.-|+++++|- | .-|+.+ .+. .......+ .+.+.....
T Consensus 122 lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRl-g---~~Gfl~--~~~~~~~~~gN~-Gl~Dq~~AL 194 (544)
T d1thga_ 122 LPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRT-G---PFGFLG--GDAITAEGNTNA-GLHDQRKGL 194 (544)
T ss_dssp EEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCC-H---HHHHCC--SHHHHHHTCTTH-HHHHHHHHH
T ss_pred CCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEeccccc-c---cccccC--CchhhccccccH-HHHHhhhhh
Confidence 38999999987431 1111 2222 22 345569999999984 0 011110 000 00012233 222333334
Q ss_pred HHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHhC--------CcccceeeEeccCC
Q psy4974 166 DIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMKY--------PHMVHKLVIWGTKS 213 (345)
Q Consensus 166 ~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~ 213 (345)
++|.+-+..+|-+ +|.|+|||.||..+..+.... ...+.++|+.++..
T Consensus 195 ~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 195 EWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred hhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 4555556666644 899999999997665554321 24789999998754
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=96.77 E-value=0.0011 Score=59.58 Aligned_cols=114 Identities=8% Similarity=-0.052 Sum_probs=61.8
Q ss_pred ceEEEEcCcCCC---c-hhhHHHHHHhhCCCCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccchHHHHHHHH
Q psy4974 94 QVLFFTYGVLGE---I-RNSFKKQLTAFDPKLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYIEEDVDIAY 169 (345)
Q Consensus 94 p~vv~lHG~~~~---~-~~~~~~~~~~L~~~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~~~~~~~~~ 169 (345)
|++|+|||++-. . ......... ..+.+.-|+.+++|- | .-|+.+.+.... .....+ .+.+.....++|.
T Consensus 98 PV~v~ihGG~~~~G~~~~~~~~~~~~-~~~~~vVvVt~nYRl-g---~~GFl~~~~~~~-~~~~N~-Gl~Dq~~AL~WV~ 170 (517)
T d1ukca_ 98 PVWLFIQGGGYAENSNANYNGTQVIQ-ASDDVIVFVTFNYRV-G---ALGFLASEKVRQ-NGDLNA-GLLDQRKALRWVK 170 (517)
T ss_dssp EEEEEECCSTTTSCCSCSCCCHHHHH-HTTSCCEEEEECCCC-H---HHHHCCCHHHHH-SSCTTH-HHHHHHHHHHHHH
T ss_pred eEEEEEcCCccccCCCccccchhhhh-hhccccceEEEEecc-c---ceeecCcccccc-ccccch-hHHHHHHHHHHHH
Confidence 899999997632 1 112222222 234558899999985 1 111110000000 011233 2222333344555
Q ss_pred HHHHHhCCc--cEEEEEeChhHHHHHHHHHh----CCcccceeeEeccCCC
Q psy4974 170 ELLKLLGVC--KVSLFGWCDGGHLSFVFSMK----YPHMVHKLVIWGTKSF 214 (345)
Q Consensus 170 ~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~----~p~~v~~lvl~~~~~~ 214 (345)
+-+..+|-+ +|.|+|+|.||..+...... ....+.++|+.++...
T Consensus 171 ~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 171 QYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp HHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred HHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeecccccc
Confidence 555566644 89999999999876544332 2237899999987544
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.43 E-value=0.002 Score=58.60 Aligned_cols=115 Identities=10% Similarity=-0.027 Sum_probs=60.5
Q ss_pred CceEEEEcCcCC---Cc-hhhHHHHHHhhC-CCCeEEEEeCCCCchhh-hccCCccCCCCCC---CCCCCCCCCccchHH
Q psy4974 93 AQVLFFTYGVLG---EI-RNSFKKQLTAFD-PKLFTSIFWDPPGNVVL-YLLGKTCSGYGQS---LPKGRSFVPFQYIEE 163 (345)
Q Consensus 93 ~p~vv~lHG~~~---~~-~~~~~~~~~~L~-~~G~~vi~~D~~G~~~~-~~~g~~~~~~G~s---~~~~~~~~~~~~~~~ 163 (345)
.|++|+|||++- ++ ...+.. ..|+ +.+.-||++++|- |.+ +|+... ...+ ......+ .+.+...
T Consensus 139 lPV~V~ihGG~f~~Gs~~~~~~~~--~~l~~~~~vVvVtinYRl-g~fGFl~~~~---~~~~~~~~~~~gN~-Gl~Dq~~ 211 (571)
T d1dx4a_ 139 LPILIWIYGGGFMTGSATLDIYNA--DIMAAVGNVIVASFQYRV-GAFGFLHLAP---EMPSEFAEEAPGNV-GLWDQAL 211 (571)
T ss_dssp EEEEEEECCSTTTCCCTTCGGGCC--HHHHHHHTCEEEEECCCC-THHHHCCCGG---GSCGGGTTSSCSCH-HHHHHHH
T ss_pred CeEEEEEeCCCccCCCCcccccch--hhhhhcCCeeEEeeccee-cccccccccc---ccccccccCCCCcc-cchHHHH
Confidence 389999999753 21 122221 1222 2248889999985 111 111000 0000 1112233 2222222
Q ss_pred HHHHHHHHHHHhCC--ccEEEEEeChhHHHHHHHHHhC--CcccceeeEeccCCC
Q psy4974 164 DVDIAYELLKLLGV--CKVSLFGWCDGGHLSFVFSMKY--PHMVHKLVIWGTKSF 214 (345)
Q Consensus 164 ~~~~~~~~l~~~~~--~~i~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 214 (345)
..++|.+-|..+|- ++|.|+|+|.||..+..+.... ...+.++|+.++...
T Consensus 212 AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 212 AIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp HHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHHHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence 23344444555554 4899999999998877655432 246888888877544
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.32 E-value=0.0017 Score=59.16 Aligned_cols=112 Identities=11% Similarity=0.108 Sum_probs=62.1
Q ss_pred CceEEEEcCcCC---Cch-h------hHHHHHHhhCC-CCeEEEEeCCCCchhhhccCCccCCCCCCCCCCCCCCCccch
Q psy4974 93 AQVLFFTYGVLG---EIR-N------SFKKQLTAFDP-KLFTSIFWDPPGNVVLYLLGKTCSGYGQSLPKGRSFVPFQYI 161 (345)
Q Consensus 93 ~p~vv~lHG~~~---~~~-~------~~~~~~~~L~~-~G~~vi~~D~~G~~~~~~~g~~~~~~G~s~~~~~~~~~~~~~ 161 (345)
.|++|+|||++- ++. . .|. ...|+. .+.-||.+++|- | .-|+.+ .+ .......+ .+.+.
T Consensus 98 lPV~V~iHGG~f~~Gs~~~~~~~~~~~~d--g~~la~~~~vIvVt~nYRl-g---~~GFl~--~~-~~~~~gN~-Gl~Dq 167 (579)
T d2bcea_ 98 LPVMIWIYGGAFLMGASQGANFLSNYLYD--GEEIATRGNVIVVTFNYRV-G---PLGFLS--TG-DSNLPGNY-GLWDQ 167 (579)
T ss_dssp EEEEEECCCCSEEEC-------CTTGGGC--CHHHHHHHTCEEEEECCCC-H---HHHHCC--CS-STTCCCCH-HHHHH
T ss_pred CcEEEEECCCcccCCCCCCcccCCccccc--hhhhhccCCEEEEeecccc-c---cccccc--cc-ccCCCccc-hhhHH
Confidence 389999999753 210 0 111 112222 248899999985 1 122221 11 11222333 22222
Q ss_pred HHHHHHHHHHHHHhCCc--cEEEEEeChhHHHHHHHHHh--CCcccceeeEeccCCC
Q psy4974 162 EEDVDIAYELLKLLGVC--KVSLFGWCDGGHLSFVFSMK--YPHMVHKLVIWGTKSF 214 (345)
Q Consensus 162 ~~~~~~~~~~l~~~~~~--~i~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 214 (345)
....+++.+-|..+|-+ +|.|+|||.||..+..+... ....++++|+.++...
T Consensus 168 ~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 224 (579)
T d2bcea_ 168 HMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVGL 224 (579)
T ss_dssp HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCTT
T ss_pred HHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCcc
Confidence 23344455555566644 89999999999877765543 2356899999987543
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=95.98 E-value=0.011 Score=47.71 Aligned_cols=29 Identities=28% Similarity=0.298 Sum_probs=22.0
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHh
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
++++..+..++++.|||+||.+|..+|..
T Consensus 125 ~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 125 EQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 33444444589999999999999888764
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=95.88 E-value=0.0054 Score=49.67 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=23.4
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHh
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
+.++++..+..++++.|||+||.+|..+|..
T Consensus 122 i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 122 VLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 3344444455689999999999999987754
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=95.78 E-value=0.013 Score=47.51 Aligned_cols=29 Identities=10% Similarity=0.131 Sum_probs=21.9
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHh
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
.++...+..++++.|||+||.+|..+|..
T Consensus 129 ~~~~~~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 129 EVVAQNPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHhCCCceEEEeccchHHHHHHHHHHH
Confidence 33333344589999999999999988765
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=95.62 E-value=0.0081 Score=48.46 Aligned_cols=29 Identities=7% Similarity=0.080 Sum_probs=21.9
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHh
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
.++...+..++.+.|||+||.+|..+|..
T Consensus 117 ~~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 117 QQASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 33344444589999999999999887754
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=95.58 E-value=0.0082 Score=48.67 Aligned_cols=29 Identities=21% Similarity=0.228 Sum_probs=22.1
Q ss_pred HHHHHhCCccEEEEEeChhHHHHHHHHHh
Q psy4974 170 ELLKLLGVCKVSLFGWCDGGHLSFVFSMK 198 (345)
Q Consensus 170 ~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~ 198 (345)
.+++.....++++.|||+||.+|..++..
T Consensus 130 ~~~~~~~~~~i~vtGHSLGGalA~l~a~~ 158 (269)
T d1tiba_ 130 DAVREHPDYRVVFTGHSLGGALATVAGAD 158 (269)
T ss_dssp HHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHhCCCcceeeeccchHHHHHHHHHHH
Confidence 33334344589999999999999998864
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=95.36 E-value=0.16 Score=38.51 Aligned_cols=53 Identities=13% Similarity=0.110 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhCC----cccceeeEeccCC
Q psy4974 161 IEEDVDIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKYP----HMVHKLVIWGTKS 213 (345)
Q Consensus 161 ~~~~~~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~~ 213 (345)
..+....+.++..+-...+++|+|+|.|+.++-.++...+ ++|.++++++-+.
T Consensus 79 ~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP~ 135 (197)
T d1cexa_ 79 IREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYTK 135 (197)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTT
T ss_pred HHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCCC
Confidence 3444555555555655669999999999999998887653 5789999998643
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=89.96 E-value=0.23 Score=37.93 Aligned_cols=48 Identities=10% Similarity=0.056 Sum_probs=32.3
Q ss_pred HHHHHHHHHhCCccEEEEEeChhHHHHHHHHHhC------------------CcccceeeEeccCC
Q psy4974 166 DIAYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY------------------PHMVHKLVIWGTKS 213 (345)
Q Consensus 166 ~~~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~------------------p~~v~~lvl~~~~~ 213 (345)
..+.++.++-.-.+++|+|+|.|+.++-.++... .++|.++++++-+.
T Consensus 70 ~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~V~avvl~GdP~ 135 (207)
T d1qoza_ 70 AAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPR 135 (207)
T ss_dssp HHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred HHHHHHHHhCCCCeEEEEeeccchHHHHHHHhccCccccccccCCCCCChhhhhcEEEEEEEeCCC
Confidence 3333444444456999999999999998876421 13678888887543
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=89.20 E-value=0.32 Score=37.16 Aligned_cols=46 Identities=20% Similarity=0.221 Sum_probs=31.1
Q ss_pred HHHHHHHhCCccEEEEEeChhHHHHHHHHHhC------------------CcccceeeEeccCC
Q psy4974 168 AYELLKLLGVCKVSLFGWCDGGHLSFVFSMKY------------------PHMVHKLVIWGTKS 213 (345)
Q Consensus 168 ~~~~l~~~~~~~i~lvGhS~Gg~ia~~~a~~~------------------p~~v~~lvl~~~~~ 213 (345)
+.++.++-.-.+++|+|+|.|+.++-.++... .++|.++++++-+.
T Consensus 72 i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~v~avvl~GdP~ 135 (207)
T d1g66a_ 72 VNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPM 135 (207)
T ss_dssp HHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred HHHHHHhCCCCcEEEEeeccccHHHHHHHhccCCccccccccccCCCchhhhceeeEEEecCCC
Confidence 33333344456999999999999998776421 13577788877543
|