Psyllid ID: psy5023


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--
MDKLSYIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNETTPTFQPTFKYQFNSHNYDNK
cccccEEEEccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccc
cccccEEEEEccccEEEcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccEcccccEEEcccccccccc
MDKLSYIFWIGdlnfrlnnpetytqdiitdrirdgqfndlLEQDQLRAVMQSgeafsefnettptfqptfkyqfnshnydnk
MDKLSYIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSefnettptfqptfkyqfnshnydnk
MDKLSYIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNETTPTFQPTFKYQFNSHNYDNK
***LSYIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLR***********************************
*DKLSYIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNETTPTFQPTFKYQFNSHNYD**
MDKLSYIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNETTPTFQPTFKYQFNSHNYDNK
*DKLSYIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNETTPTFQPTFKYQFNS******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooo
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MDKLSYIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNETTPTFQPTFKYQFNSHNYDNK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query82 2.2.26 [Sep-21-2011]
P97573 1190 Phosphatidylinositol 3,4, yes N/A 0.853 0.058 0.366 4e-09
Q9ES52 1191 Phosphatidylinositol 3,4, no N/A 0.853 0.058 0.352 1e-08
Q92835 1189 Phosphatidylinositol 3,4, yes N/A 0.853 0.058 0.352 2e-08
P50942 1183 Polyphosphatidylinositol yes N/A 0.853 0.059 0.402 2e-08
Q8CHC4 1574 Synaptojanin-1 OS=Mus mus no N/A 0.865 0.045 0.36 6e-08
O18964 1324 Synaptojanin-1 (Fragment) no N/A 0.865 0.053 0.36 7e-08
Q62910 1574 Synaptojanin-1 OS=Rattus no N/A 0.865 0.045 0.36 7e-08
O43426 1573 Synaptojanin-1 OS=Homo sa no N/A 0.865 0.045 0.36 8e-08
Q84MA2590 Type I inositol 1,4,5-tri no N/A 0.841 0.116 0.383 9e-08
O55207 1496 Synaptojanin-2 OS=Rattus no N/A 0.865 0.047 0.36 1e-07
>sp|P97573|SHIP1_RAT Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 OS=Rattus norvegicus GN=Inpp5d PE=1 SV=1 Back     alignment and function desciption
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 3   KLSYIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNET 62
           + +++FW+GDLN+R+  P T+  + I  +I+  Q++DLL  DQL    +  E F  F E 
Sbjct: 580 RFTHLFWLGDLNYRVELP-TWEAEAIIQKIKQQQYSDLLAHDQLLLERKEQEVFLHFEEE 638

Query: 63  TPTFQPTFKYQ 73
             TF PT++++
Sbjct: 639 EITFAPTYRFE 649




Phosphatidylinositol (PtdIns) phosphatase that specifically hydrolyzes the 5-phosphate of phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4,5)P3) to produce PtdIns(3,4)P2, thereby negatively regulating the PI3K (phosphoinositide 3-kinase) pathways. Acts as a negative regulator of B-cell antigen receptor signaling. Mediates signaling from the FC-gamma-RIIB receptor (FCGR2B), playing a central role in terminating signal transduction from activating immune/hematopoietic cell receptor systems. Acts as a negative regulator of myeloid cell proliferation/survival and chemotaxis, mast cell degranulation, immune cells homeostasis, integrin alpha-IIb/beta-3 signaling in platelets and JNK signaling in B-cells. Regulates proliferation of osteoclast precursors, macrophage programming, phagocytosis and activation and is required for endotoxin tolerance. Involved in the control of cell-cell junctions, CD32a signaling in neutrophils and modulation of EGF-induced phospholipase C activity. Key regulator of neutrophil migration, by governing the formation of the leading edge and polarization required for chemotaxis. Modulates FCGR3/CD16-mediated cytotoxicity in NK cells. Mediates the activin/TGF-beta-induced apoptosis through its Smad-dependent expression. May also hydrolyze PtdIns(1,3,4,5)P4, and could thus affect the levels of the higher inositol polyphosphates like InsP6.
Rattus norvegicus (taxid: 10116)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 8EC: 6
>sp|Q9ES52|SHIP1_MOUSE Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 OS=Mus musculus GN=Inpp5d PE=1 SV=2 Back     alignment and function description
>sp|Q92835|SHIP1_HUMAN Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 OS=Homo sapiens GN=INPP5D PE=1 SV=2 Back     alignment and function description
>sp|P50942|INP52_YEAST Polyphosphatidylinositol phosphatase INP52 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=INP52 PE=1 SV=1 Back     alignment and function description
>sp|Q8CHC4|SYNJ1_MOUSE Synaptojanin-1 OS=Mus musculus GN=Synj1 PE=1 SV=3 Back     alignment and function description
>sp|O18964|SYNJ1_BOVIN Synaptojanin-1 (Fragment) OS=Bos taurus GN=SYNJ1 PE=1 SV=2 Back     alignment and function description
>sp|Q62910|SYNJ1_RAT Synaptojanin-1 OS=Rattus norvegicus GN=Synj1 PE=1 SV=3 Back     alignment and function description
>sp|O43426|SYNJ1_HUMAN Synaptojanin-1 OS=Homo sapiens GN=SYNJ1 PE=1 SV=2 Back     alignment and function description
>sp|Q84MA2|IP5P1_ARATH Type I inositol 1,4,5-trisphosphate 5-phosphatase 1 OS=Arabidopsis thaliana GN=IP5P1 PE=1 SV=2 Back     alignment and function description
>sp|O55207|SYNJ2_RAT Synaptojanin-2 OS=Rattus norvegicus GN=Synj2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query82
307205899 437 Skeletal muscle and kidney-enriched inos 0.926 0.173 0.532 9e-15
322785141 458 hypothetical protein SINV_16183 [Solenop 0.902 0.161 0.533 1e-14
383852330 425 PREDICTED: LOW QUALITY PROTEIN: inositol 0.926 0.178 0.506 1e-14
332022124 436 Inositol polyphosphate 5-phosphatase K [ 0.926 0.174 0.519 5e-14
340711185 430 PREDICTED: inositol polyphosphate 5-phos 0.926 0.176 0.519 1e-13
350405721 430 PREDICTED: inositol polyphosphate 5-phos 0.926 0.176 0.519 2e-13
380013796 430 PREDICTED: inositol polyphosphate 5-phos 0.926 0.176 0.506 2e-13
357603042 345 putative skeletal muscle/kidney enriched 0.939 0.223 0.463 3e-13
328789948 430 PREDICTED: phosphatidylinositol 4,5-bisp 0.926 0.176 0.493 4e-13
260833640 412 hypothetical protein BRAFLDRAFT_243393 [ 0.878 0.174 0.506 8e-12
>gi|307205899|gb|EFN84057.1| Skeletal muscle and kidney-enriched inositol phosphatase [Harpegnathos saltator] Back     alignment and taxonomy information
 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 1/77 (1%)

Query: 6   YIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNETTPT 65
           YIFWIGDLNFRLN  +    DI    ++  Q   LLE+DQLR VM+ G+AF+E NE   T
Sbjct: 186 YIFWIGDLNFRLNGEDLTAVDI-DSMVKKKQLEKLLERDQLRMVMRDGQAFAELNENAIT 244

Query: 66  FQPTFKYQFNSHNYDNK 82
           F PT+KY+F S  +D K
Sbjct: 245 FPPTYKYEFESQAFDLK 261




Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322785141|gb|EFZ11865.1| hypothetical protein SINV_16183 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|383852330|ref|XP_003701681.1| PREDICTED: LOW QUALITY PROTEIN: inositol polyphosphate 5-phosphatase K-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|332022124|gb|EGI62446.1| Inositol polyphosphate 5-phosphatase K [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|340711185|ref|XP_003394159.1| PREDICTED: inositol polyphosphate 5-phosphatase K-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350405721|ref|XP_003487528.1| PREDICTED: inositol polyphosphate 5-phosphatase K-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|380013796|ref|XP_003690932.1| PREDICTED: inositol polyphosphate 5-phosphatase K-like [Apis florea] Back     alignment and taxonomy information
>gi|357603042|gb|EHJ63603.1| putative skeletal muscle/kidney enriched inositol 5-phosphatase [Danaus plexippus] Back     alignment and taxonomy information
>gi|328789948|ref|XP_392265.4| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase A-like isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|260833640|ref|XP_002611820.1| hypothetical protein BRAFLDRAFT_243393 [Branchiostoma floridae] gi|229297192|gb|EEN67829.1| hypothetical protein BRAFLDRAFT_243393 [Branchiostoma floridae] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query82
FB|FBgn0034179357 CG6805 [Drosophila melanogaste 0.914 0.210 0.402 9.4e-11
DICTYBASE|DDB_G0292392 1379 Dd5P3 "inositol 5-phosphatase" 0.865 0.051 0.413 4.7e-10
FB|FBgn0030761 508 CG9784 [Drosophila melanogaste 0.914 0.147 0.392 8.6e-10
TAIR|locus:2013031664 AT1G71710 "AT1G71710" [Arabido 0.841 0.103 0.438 1.7e-09
UNIPROTKB|G5EEJ9 1113 unc-26 "Synaptojanin UNC-26B" 0.926 0.068 0.387 2.6e-09
WB|WBGene00006763 1119 unc-26 [Caenorhabditis elegans 0.926 0.067 0.387 2.6e-09
UNIPROTKB|G5ECL2 1119 unc-26 "Synaptojanin UNC-26A" 0.926 0.067 0.387 2.6e-09
SGD|S000005050 1183 INP52 "Polyphosphatidylinosito 0.853 0.059 0.402 2.8e-09
FB|FBgn0034691 1218 synj "synaptojanin" [Drosophil 0.865 0.058 0.386 2.9e-09
UNIPROTKB|A6QNM5 416 INPP5K "Uncharacterized protei 0.865 0.170 0.364 1.2e-08
FB|FBgn0034179 CG6805 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 156 (60.0 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 31/77 (40%), Positives = 48/77 (62%)

Query:     6 YIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNETTPT 65
             ++FW GDLNFRL+  +    D+ TD + + ++ DLL+ DQL  + + G AFS   E  P 
Sbjct:   186 FVFWFGDLNFRLSG-DMSAWDVRTD-VENQRYADLLKLDQLNLLREKGNAFSLLEEQQPN 243

Query:    66 FQPTFKYQFNSHNYDNK 82
             F PTFK+   +++Y+ K
Sbjct:   244 FAPTFKFVEGTNDYNLK 260




GO:0046030 "inositol trisphosphate phosphatase activity" evidence=NAS
GO:0016311 "dephosphorylation" evidence=NAS
GO:0046854 "phosphatidylinositol phosphorylation" evidence=IEA
DICTYBASE|DDB_G0292392 Dd5P3 "inositol 5-phosphatase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0030761 CG9784 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
TAIR|locus:2013031 AT1G71710 "AT1G71710" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G5EEJ9 unc-26 "Synaptojanin UNC-26B" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00006763 unc-26 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|G5ECL2 unc-26 "Synaptojanin UNC-26A" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
SGD|S000005050 INP52 "Polyphosphatidylinositol phosphatase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
FB|FBgn0034691 synj "synaptojanin" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|A6QNM5 INPP5K "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query82
cd09093292 cd09093, INPP5c_INPP5B, Catalytic inositol polypho 4e-19
cd09094300 cd09094, INPP5c_INPP5J-like, Catalytic inositol po 1e-18
cd09089328 cd09089, INPP5c_Synj, Catalytic inositol polyphosp 7e-17
cd09074299 cd09074, INPP5c, Catalytic domain of inositol poly 1e-16
smart00128306 smart00128, IPPc, Inositol polyphosphate phosphata 4e-15
cd09090291 cd09090, INPP5c_ScInp51p-like, Catalytic inositol 4e-15
cd09095298 cd09095, INPP5c_INPP5E-like, Catalytic inositol po 9e-13
cd09100307 cd09100, INPP5c_SHIP1-INPP5D, Catalytic inositol p 1e-12
PLN03191621 PLN03191, PLN03191, Type I inositol-1,4,5-trisphos 6e-12
cd09091307 cd09091, INPP5c_SHIP, Catalytic inositol polyphosp 6e-12
COG5411 460 COG5411, COG5411, Phosphatidylinositol 5-phosphate 5e-11
cd09098336 cd09098, INPP5c_Synj1, Catalytic inositol polyphos 1e-10
cd09099336 cd09099, INPP5c_Synj2, Catalytic inositol polyphos 1e-10
cd09101304 cd09101, INPP5c_SHIP2-INPPL1, Catalytic inositol p 2e-08
>gnl|CDD|197327 cd09093, INPP5c_INPP5B, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Type II inositol polyphosphate 5-phosphatase I, Oculocerebrorenal syndrome of Lowe 1, and related proteins Back     alignment and domain information
 Score = 78.1 bits (193), Expect = 4e-19
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 7   IFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNETTPTF 66
           +FW+GDLN+R+    T   + + + I      +LL+ DQL    ++G+ F  F E    F
Sbjct: 176 VFWLGDLNYRIQELPT---EEVKELIEKNDLEELLKYDQLNIQRRAGKVFEGFTEGEINF 232

Query: 67  QPTFKYQFNSHNYD 80
            PT+KY   + N+D
Sbjct: 233 IPTYKYDPGTDNWD 246


This subfamily contains the INPP5c domain of type II inositol polyphosphate 5-phosphatase I (INPP5B), Oculocerebrorenal syndrome of Lowe 1 (OCRL-1), and related proteins. It belongs to a family of Mg2+-dependent inositol polyphosphate 5-phosphatases, which hydrolyze the 5-phosphate from the inositol ring of various 5-position phosphorylated phosphoinositides (PIs) and inositol phosphates (IPs), and to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. INPP5B and OCRL1 preferentially hydrolyze the 5-phosphate of phosphatidylinositol (4,5)- bisphosphate [PI(4,5)P2] and phosphatidylinositol (3,4,5)- trisphosphate [PI(3,4,5)P3]. INPP5B can also hydrolyze soluble inositol (1,4,5)-trisphosphate [I(1,4,5)P3] and inositol (1,3,4,5)-tetrakisphosphate [I(1,3,4,5)P4]. INPP5B participates in the endocytic pathway and in the early secretory pathway. In the latter, it may function in retrograde ERGIC (ER-to-Golgi intermediate compartment)-to-ER transport; it binds specific RAB proteins within the secretory pathway. In the endocytic pathway, it binds RAB5 and during endocytosis, may function in a RAB5-controlled cascade for converting PI(3,4,5)P3 to phosphatidylinositol 3-phosphate (PI3P). This cascade may link growth factor signaling and membrane dynamics. Mutation in OCRL1 is implicated in Lowe syndrome, an X-linked recessive multisystem disorder, which includes defects in eye, brain, and kidney function, and in Type 2 Dent's disease, a disorder with only the renal symptoms. OCRL-1 may have a role in membrane trafficking within the endocytic pathway and at the trans-Golgi network, and may participate in actin dynamics or signaling from endomembranes. OCRL1 and INPP5B have overlapping functions: deletion of both 5-phosphatases in mice is embryonic lethal, deletion of OCRL1 alone has no phenotype, and deletion of Inpp5b alone has only a mild phenotype (male sterility). Several of the proteins that interact with OCRL1 also bind INPP5B, for examples, inositol polyphosphate phosphatase interacting protein of 27kDa (IPIP27)A and B (also known as Ses1 and 2), and endocytic signaling adaptor APPL1. OCRL1, but not INPP5B, binds clathrin heavy chain, the plasma membrane AP2 adaptor subunit alpha-adaptin. In addition to this INPP5c domain, most proteins in this subfamily have a C-terminal RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain. Length = 292

>gnl|CDD|197328 cd09094, INPP5c_INPP5J-like, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of inositol polyphosphate 5-phosphatase J and related proteins Back     alignment and domain information
>gnl|CDD|197323 cd09089, INPP5c_Synj, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanins Back     alignment and domain information
>gnl|CDD|197308 cd09074, INPP5c, Catalytic domain of inositol polyphosphate 5-phosphatases Back     alignment and domain information
>gnl|CDD|214525 smart00128, IPPc, Inositol polyphosphate phosphatase, catalytic domain homologues Back     alignment and domain information
>gnl|CDD|197324 cd09090, INPP5c_ScInp51p-like, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Saccharomyces cerevisiae Inp51p, Inp52p, and Inp53p, and related proteins Back     alignment and domain information
>gnl|CDD|197329 cd09095, INPP5c_INPP5E-like, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Inositol polyphosphate-5-phosphatase E and related proteins Back     alignment and domain information
>gnl|CDD|197334 cd09100, INPP5c_SHIP1-INPP5D, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins Back     alignment and domain information
>gnl|CDD|215624 PLN03191, PLN03191, Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional Back     alignment and domain information
>gnl|CDD|197325 cd09091, INPP5c_SHIP, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and -2, and related proteins Back     alignment and domain information
>gnl|CDD|227698 COG5411, COG5411, Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|197332 cd09098, INPP5c_Synj1, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1 Back     alignment and domain information
>gnl|CDD|197333 cd09099, INPP5c_Synj2, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 2 Back     alignment and domain information
>gnl|CDD|197335 cd09101, INPP5c_SHIP2-INPPL1, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol 5-phosphatase-2 and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 82
KOG0566|consensus 1080 99.97
smart00128310 IPPc Inositol polyphosphate phosphatase, catalytic 99.97
PLN03191621 Type I inositol-1,4,5-trisphosphate 5-phosphatase 99.97
COG5411 460 Phosphatidylinositol 5-phosphate phosphatase [Sign 99.92
PTZ00312 356 inositol-1,4,5-triphosphate 5-phosphatase; Provisi 99.67
KOG0565|consensus145 98.57
KOG1976|consensus391 97.55
KOG3870|consensus434 89.04
PF03372249 Exo_endo_phos: Endonuclease/Exonuclease/phosphatas 83.48
>KOG0566|consensus Back     alignment and domain information
Probab=99.97  E-value=2.1e-32  Score=218.98  Aligned_cols=77  Identities=36%  Similarity=0.782  Sum_probs=75.4

Q ss_pred             CCCccEEEEeCcCCCccCCCCCCCHHHHHHHHhccChHHHHHhHHHHHHHhhCcccCCcccCCCCCCCCCCCcCCCCCcc
Q psy5023           1 MDKLSYIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNETTPTFQPTFKYQFNSHNYD   80 (82)
Q Consensus         1 ~~~~d~vfw~GDlNyRi~~~~~l~~~~v~~~i~~~~~~~Ll~~DQL~~~~~~~~~f~~f~E~~I~F~PTYK~~~~s~~Yd   80 (82)
                      |.+||+|||||||||||+    ++.++|+..|.+++|+.|+++|||+++|.+|.+|.||.|++|+|+||||||.||+.||
T Consensus       711 I~~HD~ifW~GDFNYRI~----l~nEEVr~~v~~~d~~kL~e~DQL~~q~~~G~vF~gF~E~~ltF~PTYKyD~gTd~YD  786 (1080)
T KOG0566|consen  711 IFSHDYIFWLGDFNYRID----LSNEEVRRLVRNQDLDKLLEYDQLTQQMNAGQVFPGFHEGQLTFPPTYKYDPGTDDYD  786 (1080)
T ss_pred             ccCCceEEEecccceeec----CCHHHHHHHHHhccHHHHhhHHHHHHHHhcCcccccccccccccCCcccccCCCCccc
Confidence            578999999999999999    6999999999999999999999999999999999999999999999999999999999


Q ss_pred             C
Q psy5023          81 N   81 (82)
Q Consensus        81 t   81 (82)
                      |
T Consensus       787 T  787 (1080)
T KOG0566|consen  787 T  787 (1080)
T ss_pred             c
Confidence            8



>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues Back     alignment and domain information
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional Back     alignment and domain information
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional Back     alignment and domain information
>KOG0565|consensus Back     alignment and domain information
>KOG1976|consensus Back     alignment and domain information
>KOG3870|consensus Back     alignment and domain information
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query82
1i9y_A347 Crystal Structure Of Inositol Polyphosphate 5-Phosp 2e-07
3n9v_A313 Crystal Structure Of Inpp5b Length = 313 1e-06
3mtc_A313 Crystal Structure Of Inpp5b In Complex With Phospha 1e-06
1ntf_A282 Crystal Structure Of Cimex Nitrophorin Length = 282 3e-06
2xsw_A357 Crystal Structure Of Human Inpp5e Length = 357 5e-06
3nr8_B316 Crystal Structure Of Human Ship2 Length = 316 1e-05
>pdb|1I9Y|A Chain A, Crystal Structure Of Inositol Polyphosphate 5-Phosphatase Domain (Ipp5c) Of Spsynaptojanin Length = 347 Back     alignment and structure

Iteration: 1

Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Query: 6 YIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNETTPT 65 Y+ W GD N+R+ + T + + I G+ + L E DQL M +G+ F F+E T Sbjct: 201 YVVWFGDFNYRI----SLTYEEVVPCIAQGKLSYLFEYDQLNKQMLTGKVFPFFSELPIT 256 Query: 66 FQPTFKYQFNSHNYD 80 F PT+K+ + YD Sbjct: 257 FPPTYKFDIGTDIYD 271
>pdb|3N9V|A Chain A, Crystal Structure Of Inpp5b Length = 313 Back     alignment and structure
>pdb|3MTC|A Chain A, Crystal Structure Of Inpp5b In Complex With Phosphatidylinositol 4- Phosphate Length = 313 Back     alignment and structure
>pdb|1NTF|A Chain A, Crystal Structure Of Cimex Nitrophorin Length = 282 Back     alignment and structure
>pdb|2XSW|A Chain A, Crystal Structure Of Human Inpp5e Length = 357 Back     alignment and structure
>pdb|3NR8|B Chain B, Crystal Structure Of Human Ship2 Length = 316 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query82
2xsw_A357 72 kDa inositol polyphosphate 5-phosphatase; inosi 1e-22
4a9c_A316 Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; 2e-21
3mtc_A313 Type II inositol-1,4,5-trisphosphate 5-phosphatas; 5e-21
1i9z_A347 Synaptojanin, phosphatidylinositol phosphate phosp 1e-20
2imq_X282 Salivary nitrophorin; ferrous heme, beta-sandwich, 1e-20
>2xsw_A 72 kDa inositol polyphosphate 5-phosphatase; inositol signalling, SGC stockholm, structural genomics CONS hydrolase; 1.90A {Homo sapiens} Length = 357 Back     alignment and structure
 Score = 87.3 bits (216), Expect = 1e-22
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%)

Query: 2   DKLSYIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNE 61
            +   +FW GD NFRL+   T    ++  +        LL+ DQL   M+ G  F  F E
Sbjct: 194 TRFDEVFWFGDFNFRLSGGRTVVDALL-CQGLVVDVPALLQHDQLIREMRKGSIFKGFQE 252

Query: 62  TTPTFQPTFKYQFNSHNYDNK 82
               F P++K+      YD+ 
Sbjct: 253 PDIHFLPSYKFDIGKDTYDST 273


>4a9c_A Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; SGC, signalling, structural genomics consortium stockholm, magnesium binding, hydrolase; HET: B5F; 2.10A {Homo sapiens} PDB: 3nr8_B* Length = 316 Back     alignment and structure
>3mtc_A Type II inositol-1,4,5-trisphosphate 5-phosphatas; INPP5BA,phosphoinositide 5-phosphatase, inositol signalling, phosphatase, magnesium; HET: PIF; 2.40A {Homo sapiens} PDB: 3n9v_A Length = 313 Back     alignment and structure
>1i9z_A Synaptojanin, phosphatidylinositol phosphate phosphatase; spsynaptojanin, IPP5C, IP3, IP2,, hydrolase; HET: 2IP; 1.80A {Schizosaccharomyces pombe} SCOP: d.151.1.2 PDB: 1i9y_A* Length = 347 Back     alignment and structure
>2imq_X Salivary nitrophorin; ferrous heme, beta-sandwich, transport protein; HET: HEM; 1.30A {Cimex lectularius} SCOP: d.151.1.2 PDB: 1ntf_A* 1y21_A* 1yjh_A* 1si6_X* Length = 282 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query82
3mtc_A313 Type II inositol-1,4,5-trisphosphate 5-phosphatas; 100.0
4a9c_A316 Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; 99.97
2xsw_A357 72 kDa inositol polyphosphate 5-phosphatase; inosi 99.96
1i9z_A347 Synaptojanin, phosphatidylinositol phosphate phosp 99.95
2imq_X282 Salivary nitrophorin; ferrous heme, beta-sandwich, 99.94
3pt1_A471 UPF0364 protein YMR027W; alpha/beta fold, carbohyd 87.05
>3mtc_A Type II inositol-1,4,5-trisphosphate 5-phosphatas; INPP5BA,phosphoinositide 5-phosphatase, inositol signalling, phosphatase, magnesium; HET: PIF; 2.40A {Homo sapiens} PDB: 3n9v_A Back     alignment and structure
Probab=100.00  E-value=9.3e-34  Score=206.35  Aligned_cols=78  Identities=32%  Similarity=0.646  Sum_probs=74.6

Q ss_pred             CCCccEEEEeCcCCCccCCCCCCCHHHHHHHHhccChHHHHHhHHHHHHHhhCcccCCcccCCCCCCCCCCCcCCCCCcc
Q psy5023           1 MDKLSYIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNETTPTFQPTFKYQFNSHNYD   80 (82)
Q Consensus         1 ~~~~d~vfw~GDlNyRi~~~~~l~~~~v~~~i~~~~~~~Ll~~DQL~~~~~~~~~f~~f~E~~I~F~PTYK~~~~s~~Yd   80 (82)
                      |.+||+|||+|||||||+.   ++.++|+++|++++|..|+++|||+++++++.+|.||+|++|+|||||||++||+.||
T Consensus       179 i~~~d~vfw~GDLNyRi~~---~~~~~v~~~i~~~~~~~Ll~~DQL~~~~~~g~~f~gf~E~~I~F~PTYKyd~~s~~yd  255 (313)
T 3mtc_A          179 ISNHDVILWLGDLNYRIEE---LDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELTFQPTYKYDTGSDDWD  255 (313)
T ss_dssp             TTSSSEEEEEEECCCCBCS---SCHHHHHHHHHTTCHHHHHTTBHHHHHHHTTSSCTTCBCCCCCSCCCBCBCTTSSSBC
T ss_pred             ccCCceEEEeccccccccC---CCHHHHHHHHhcCCHHHHHHhHHHHHHHHcCCccCCcccCCcCcCCCccCcCCCcccc
Confidence            4689999999999999984   5889999999999999999999999999999999999999999999999999999999


Q ss_pred             C
Q psy5023          81 N   81 (82)
Q Consensus        81 t   81 (82)
                      |
T Consensus       256 t  256 (313)
T 3mtc_A          256 T  256 (313)
T ss_dssp             C
T ss_pred             c
Confidence            7



>4a9c_A Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; SGC, signalling, structural genomics consortium stockholm, magnesium binding, hydrolase; HET: B5F; 2.10A {Homo sapiens} PDB: 3nr8_B* Back     alignment and structure
>2xsw_A 72 kDa inositol polyphosphate 5-phosphatase; inositol signalling, SGC stockholm, structural genomics CONS hydrolase; 1.90A {Homo sapiens} Back     alignment and structure
>1i9z_A Synaptojanin, phosphatidylinositol phosphate phosphatase; spsynaptojanin, IPP5C, IP3, IP2,, hydrolase; HET: 2IP; 1.80A {Schizosaccharomyces pombe} SCOP: d.151.1.2 PDB: 1i9y_A* Back     alignment and structure
>2imq_X Salivary nitrophorin; ferrous heme, beta-sandwich, transport protein; HET: HEM; 1.30A {Cimex lectularius} SCOP: d.151.1.2 PDB: 1ntf_A* 1y21_A* 1yjh_A* 1si6_X* Back     alignment and structure
>3pt1_A UPF0364 protein YMR027W; alpha/beta fold, carbohydrate phosphatase, F6P binding, HYDR; HET: F6P; 1.77A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 82
d1i9za_345 d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission 1e-13
d2imqx1280 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug ( 3e-05
>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 345 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Inositol polyphosphate 5-phosphatase (IPP5)
domain: Synaptojanin, IPP5C domain
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 Score = 61.7 bits (149), Expect = 1e-13
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)

Query: 6   YIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNETTPT 65
           Y+ W GD N+R++         I      G+ + L E DQL   M +G+ F  F+E   T
Sbjct: 201 YVVWFGDFNYRISLTYEEVVPCI----AQGKLSYLFEYDQLNKQMLTGKVFPFFSELPIT 256

Query: 66  FQPTFKYQFNSHNYDN 81
           F PT+K+   +  YD 
Sbjct: 257 FPPTYKFDIGTDIYDT 272


>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]} Length = 280 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query82
d1i9za_345 Synaptojanin, IPP5C domain {Fission yeast (Schizos 99.93
d2imqx1280 Salivary nitrophorin {Bedbug (Cimex lectularius) [ 99.35
d2ddra1299 Sphingomyelin phosphodiesterase C {Bacillus cereus 87.09
d1zwxa1293 Sphingomyelin phosphodiesterase C {Listeria ivanov 83.19
>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Inositol polyphosphate 5-phosphatase (IPP5)
domain: Synaptojanin, IPP5C domain
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.93  E-value=1.5e-26  Score=166.13  Aligned_cols=77  Identities=34%  Similarity=0.675  Sum_probs=73.6

Q ss_pred             CCCccEEEEeCcCCCccCCCCCCCHHHHHHHHhccChHHHHHhHHHHHHHhhCcccCCcccCCCCCCCCCCCcCCCCCcc
Q psy5023           1 MDKLSYIFWIGDLNFRLNNPETYTQDIITDRIRDGQFNDLLEQDQLRAVMQSGEAFSEFNETTPTFQPTFKYQFNSHNYD   80 (82)
Q Consensus         1 ~~~~d~vfw~GDlNyRi~~~~~l~~~~v~~~i~~~~~~~Ll~~DQL~~~~~~~~~f~~f~E~~I~F~PTYK~~~~s~~Yd   80 (82)
                      +.++|+|||+||||||++    ++...+.+++..+++..|+++|||..+++++.+|.+|.|++|+|+|||||+.+++.||
T Consensus       196 ~~~~d~v~~~GDlN~R~~----~~~~~~~~~i~~~~~~~l~~~dql~~~~~~~~~~~~~~E~~I~F~PTyk~~~~~~~yd  271 (345)
T d1i9za_         196 IFNHDYVVWFGDFNYRIS----LTYEEVVPCIAQGKLSYLFEYDQLNKQMLTGKVFPFFSELPITFPPTYKFDIGTDIYD  271 (345)
T ss_dssp             TTSSSEEEEEEECCCCBS----SCHHHHHHHHHTTCHHHHHTTBHHHHHHHTTSSSTTCBCCCCCSCCCBCBCTTSSCBC
T ss_pred             cccCceeEEecccccccc----CchhhhHhhhhccchhHHHHHHHHHhhhhccCcccCcccCCCCCCCCCeEECCCCccC
Confidence            457899999999999999    6889999999999999999999999999999999999999999999999999999998


Q ss_pred             C
Q psy5023          81 N   81 (82)
Q Consensus        81 t   81 (82)
                      +
T Consensus       272 ~  272 (345)
T d1i9za_         272 T  272 (345)
T ss_dssp             C
T ss_pred             C
Confidence            6



>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]} Back     information, alignment and structure
>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]} Back     information, alignment and structure