Psyllid ID: psy5048

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MKQKLLLPFGENRNPFYKTPCIRPRSTLSLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFLQYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFFLFYNMSSPLNKVNAYLCSESEHNTSVDT
Secondary Structure (PSIPRED)
ccEEEEEEcccccccccccccccccccEEEcccccEEEEccccccccccccccEEEEEEcEEEcccccccccccccccEEEEcccccEEccHHHHHHccccccEEEEEEccccccccccccccccccccEEEEEEEEEEEEccccEEEcccccccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcHHHHHHHHHHcccccHHHHHHccccEEccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEcccEEEEEEEcccccccccccEEcccccccccccc
Secondary Structure Prediction (SSPRO)
cccHEEEEEccccccccccccccccccEEEEEEEEcccccccccccccccccEEEEEEEEEEEccccEEccccHHcccEEEEcccccccHHHHHHHcccccccEEEEEEcHHHccccccEcccEcccccEEEEEEEEEEccccccEEEEcHHHHHHcccccccccHHHHHHHHHHHHcHHHHcccccHHHccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHccccEEEHHHHHHHHHHHHHHHHHHHHHHcHHHHccccHHHHccHHHHHHEHHcccccEEEcccEEEEEEEcccccccccEEEEEccccccccccc
Coil and Loop (DISEMBL)
mkqklllpfgenrnpfyktpcirprstlslspyslslilprraenlkpyvNVKICvssfkptfKLTLVAMRihdrdqpftftLGVGQVIKGWDQGLTEMCVgekrkltippalaygdrgagnvipgglsavrqsehselEISTKFFLELIpnkflhwdrrftqkgpmaknreHIAHRARRdrgkrriqsfkphraeseKLYAHCSSAYALLvkktpsihncfllSTKSMLTFarnqstipawthdYTRLALLlpflqyefppeqsqclpllgiraqhqrghmitqgSLYFFLFYNMSSPLNKVNAYLCsesehntsvdt
Flexible Loop (DISEMBL)
mkqklllpfgenrnpfyktpcirprstlslSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQSEHSELEISTKFFLELIPNKFLHWDRRFtqkgpmaknrehiahrarrdrgkrriqsfkphraeseklYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFLQYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFFLFYNMSSPLNKVNAYLCSesehntsvdt
Low Complexity Region (SEG)
MKQKLLLPFGENRNPFYKTPCIrprstlslspyslslilprrAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHrarrdrgkrrIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFLQYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFFLFYNMSSPLNKVNAYLCSESEHNTSVDT
Disordered region (IsUnstruct)
********F**NRNPFYKTPCIRPRSTLSLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVR****SELEISTKFFLELIPNKFLHWDRRFT*************************************LYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFLQYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFFLFYNMSSPLNKVNAYLC***********
Disordered Region (DISOPRED)
*KQKLLLPFG*****************LSLSPYSLSLILPRRAE***PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQSEHSELEISTKFFLELIPNKFLHWD*R***KGPMAKNREHIA*******************AESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFLQYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFFLFYNMSSPLNKVNAYLCS**********
Disordered Region (DISEMBL)
MKQKLLLPFGENRNPFYKTPCIRPRSTLSLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMAKNREH************RIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFLQYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFFLFYNMSSPLNKVNAYLCS**********
Disordered Region (DISPRO)
*KQKLLLPFGENRNPFYKTPCIRPRSTLSLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFLQYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFFLFYNMSSPLNKVNAYLCS**********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKQKLLLPFGENRNPFYKTPCIRPRSTLSLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFLQYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFFLFYNMSSPLNKVNAYLCSESEHNTSVDT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	319	2.2.26 [Sep-21-2011]
P0C1J5	209	FK506-binding protein 2B	N/A	N/A	0.222	0.339	0.580	9e-21
Q5ATN7	135	FK506-binding protein 2 O	yes	N/A	0.210	0.496	0.617	4e-17
Q54SR7	133	FK506-binding protein 2 O	yes	N/A	0.166	0.398	0.716	9e-17
Q6BP84	135	FK506-binding protein 2 O	yes	N/A	0.222	0.525	0.583	3e-16
P0CP96	141	FK506-binding protein 2 O	yes	N/A	0.163	0.368	0.730	3e-16
P0CP97	141	FK506-binding protein 2 O	N/A	N/A	0.163	0.368	0.730	3e-16
P26885	142	Peptidyl-prolyl cis-trans	yes	N/A	0.222	0.5	0.577	5e-16
P45878	140	Peptidyl-prolyl cis-trans	yes	N/A	0.206	0.471	0.606	8e-16
Q32PA9	140	Peptidyl-prolyl cis-trans	yes	N/A	0.206	0.471	0.606	9e-16
Q4WHX4	134	FK506-binding protein 2 O	yes	N/A	0.210	0.5	0.558	2e-15

>sp|P0C1J5|FKB2B_RHIO9 FK506-binding protein 2B OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=FKBP3 PE=3 SV=1

 Score =  101 bits (251), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 47/81 (58%), Positives = 56/81 (69%), Gaps = 10/81 (12%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQ 133
           DR++PF FTLG GQVI+GWDQGL  MCVGEKR+L IPP L YG+RGAG VIPGG + V +
Sbjct: 70  DRNEPFVFTLGAGQVIQGWDQGLLGMCVGEKRRLVIPPHLGYGERGAGGVIPGGATLVFE 129

Query: 134 SEHSELEISTKFFLELIPNKF 154
            E           LE+ P K+
Sbjct: 130 VE----------LLEIKPGKY 140

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) (taxid: 246409)
EC: 5EC: .EC: 2EC: .EC: 1EC: .EC: 8

>sp|Q5ATN7|FKBP2_EMENI FK506-binding protein 2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fkbB PE=3 SV=1

 Score = 89.4 bits (220), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 50/68 (73%), Gaps = 1/68 (1%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVR 132
           +DR  PF F LG G+VIKGWD+GL +MCVGEKR LTIPP   YGDRG G  IPGG + + 
Sbjct: 62  YDRGTPFKFKLGAGRVIKGWDEGLLDMCVGEKRTLTIPPEYGYGDRGIGP-IPGGATLIF 120

Query: 133 QSEHSELE 140
           Q+E  E+E
Sbjct: 121 QTELLEIE 128

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q54SR7|FKBP2_DICDI FK506-binding protein 2 OS=Dictyostelium discoideum GN=fkbp2 PE=3 SV=1

 Score = 87.8 bits (216), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 38/53 (71%), Positives = 43/53 (81%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPG 126
           DR  PF F +GVGQVIKGWDQG+  MCVGEKRKL IPP+L YG +GAG+ IPG
Sbjct: 67  DRGTPFEFKIGVGQVIKGWDQGVLGMCVGEKRKLIIPPSLGYGQQGAGDKIPG 119

PPIases accelerate the folding of proteins by catalyzing the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Dictyostelium discoideum (taxid: 44689)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q6BP84|FKBP2_DEBHA FK506-binding protein 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=FPR2 PE=3 SV=2

 Score = 86.3 bits (212), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 1/72 (1%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVR 132
           + R QP +F LG+GQVI+GWDQGLT MC+GEKRKLTIP  LAYGDRG G  IP   + V 
Sbjct: 61  YSRGQPISFQLGIGQVIQGWDQGLTRMCIGEKRKLTIPSHLAYGDRGVGP-IPAKATLVF 119

Query: 133 QSEHSELEISTK 144
            +E  ++  S+K
Sbjct: 120 VAELVDIAGSSK 131

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|P0CP96|FKBP2_CRYNJ FK506-binding protein 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=FPR2 PE=3 SV=1

 Score = 86.3 bits (212), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/52 (73%), Positives = 43/52 (82%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR++PF FTLG GQVIKGWDQGL +MC+ EKRKLTIP  LAYG+RG   VIP
Sbjct: 68  DRNRPFEFTLGAGQVIKGWDQGLLDMCISEKRKLTIPSHLAYGERGHPPVIP 119

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|P0CP97|FKBP2_CRYNB FK506-binding protein 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=FPR2 PE=3 SV=1

 Score = 85.9 bits (211), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/52 (73%), Positives = 43/52 (82%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR++PF FTLG GQVIKGWDQGL +MC+ EKRKLTIP  LAYG+RG   VIP
Sbjct: 68  DRNRPFEFTLGAGQVIKGWDQGLLDMCISEKRKLTIPSHLAYGERGHPPVIP 119

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (taxid: 283643)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|P26885|FKBP2_HUMAN Peptidyl-prolyl cis-trans isomerase FKBP2 OS=Homo sapiens GN=FKBP2 PE=1 SV=2

 Score = 85.5 bits (210), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 50/71 (70%)

Query: 75  RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQS 134
           ++QPF F+LG GQVIKGWDQGL  MC GEKRKL IP  L YG+RGA   IPGG + V + 
Sbjct: 72  QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEV 131

Query: 135 EHSELEISTKF 145
           E  ++E  T+ 
Sbjct: 132 ELLKIERRTEL 142

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Homo sapiens (taxid: 9606)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|P45878|FKBP2_MOUSE Peptidyl-prolyl cis-trans isomerase FKBP2 OS=Mus musculus GN=Fkbp2 PE=1 SV=1

 Score = 84.7 bits (208), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 40/66 (60%), Positives = 48/66 (72%)

Query: 75  RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQS 134
           ++QPF F+LG GQVIKGWDQGL  MC GEKRKL IP  L YG+RGA   IPGG + V + 
Sbjct: 70  QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEV 129

Query: 135 EHSELE 140
           E  ++E
Sbjct: 130 ELLKIE 135

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Mus musculus (taxid: 10090)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q32PA9|FKBP2_BOVIN Peptidyl-prolyl cis-trans isomerase FKBP2 OS=Bos taurus GN=FKBP2 PE=2 SV=1

 Score = 84.7 bits (208), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 40/66 (60%), Positives = 48/66 (72%)

Query: 75  RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQS 134
           ++QPF F+LG GQVIKGWDQGL  MC GEKRKL IP  L YG+RGA   IPGG + V + 
Sbjct: 70  QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEV 129

Query: 135 EHSELE 140
           E  ++E
Sbjct: 130 ELLKIE 135

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Bos taurus (taxid: 9913)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

>sp|Q4WHX4|FKBP2_ASPFU FK506-binding protein 2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=fpr2 PE=3 SV=1

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 50/68 (73%), Gaps = 1/68 (1%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVR 132
           + R+QP  F LG G+VIKGWD+GL +MCVGEKR LTIPP   YG+RG G  IPGG + + 
Sbjct: 61  YGRNQPLKFKLGAGRVIKGWDEGLLDMCVGEKRTLTIPPEYGYGERGIGP-IPGGATLIF 119

Query: 133 QSEHSELE 140
           ++E  ++E
Sbjct: 120 ETELVQIE 127

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

EC: 5

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
157105484	211	fk506-binding protein [Aedes aegypti] gi	0.373	0.563	0.492	2e-24
170059780	214	conserved hypothetical protein [Culex qu	0.269	0.401	0.651	4e-24
170046546	154	conserved hypothetical protein [Culex qu	0.272	0.564	0.644	6e-24
158293614	211	AGAP008822-PA [Anopheles gambiae str. PE	0.373	0.563	0.492	6e-24
332376793	216	unknown [Dendroctonus ponderosae]	0.235	0.347	0.636	1e-22
193606149	228	PREDICTED: peptidyl-prolyl cis-trans iso	0.184	0.258	0.847	1e-22
429327007	241	FK506-binding like protein [Coptotermes	0.391	0.518	0.463	2e-22
239793673	186	ACYPI003483 [Acyrthosiphon pisum]	0.197	0.338	0.809	2e-22
345497242	217	PREDICTED: FK506-binding protein 2-like	0.175	0.258	0.857	3e-22
350415003	236	PREDICTED: peptidyl-prolyl cis-trans iso	0.194	0.262	0.774	4e-22

>gi|157105484|ref|XP_001648889.1| fk506-binding protein [Aedes aegypti] gi|108880073|gb|EAT44298.1| AAEL004313-PA [Aedes aegypti]

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/130 (49%), Positives = 77/130 (59%), Gaps = 11/130 (8%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQ 133
           DRDQPFTF LG GQVIKGWDQGLT+MCVGEKRKLTIPP L YGDRGAGNVIPGG + V  
Sbjct: 61  DRDQPFTFQLGAGQVIKGWDQGLTDMCVGEKRKLTIPPELGYGDRGAGNVIPGGATLVFD 120

Query: 134 SEH---SELEISTKFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSF 190
            E     +   +T  F E+  NK +   R         +  E++  +     G +  +  
Sbjct: 121 VELINIGDTAPTTNVFKEIDENKDMQLSRE--------EVSEYLKKQMVAADGGQESEDI 172

Query: 191 KPHRAESEKL 200
           K   AE +KL
Sbjct: 173 KNMIAEHDKL 182

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170059780|ref|XP_001865511.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167878456|gb|EDS41839.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  118 bits (295), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 58/89 (65%), Positives = 63/89 (70%), Gaps = 3/89 (3%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQ 133
           DRDQPFTF LG GQVIKGWDQGLT+MCVGEKRKLTIPP L YGDRGAGNVIPGG + V  
Sbjct: 11  DRDQPFTFQLGAGQVIKGWDQGLTDMCVGEKRKLTIPPELGYGDRGAGNVIPGGATLVFD 70

Query: 134 SEHSELEIS---TKFFLELIPNKFLHWDR 159
            E   +  S   T  F E+  NK +   R
Sbjct: 71  VELINIGDSPPTTNVFKEIDENKDMQLSR 99

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170046546|ref|XP_001850822.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167869304|gb|EDS32687.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/90 (64%), Positives = 63/90 (70%), Gaps = 3/90 (3%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQ 133
           DRDQPFTF LG GQVIKGWDQGLT+MCVGEKRKLTIPP L YGDRGAGNVIPGG + V  
Sbjct: 4   DRDQPFTFQLGAGQVIKGWDQGLTDMCVGEKRKLTIPPELGYGDRGAGNVIPGGATLVFD 63

Query: 134 SEHSELEIS---TKFFLELIPNKFLHWDRR 160
            E   +  S   T  F E+  NK +   R 
Sbjct: 64  VELINIGDSPPTTNVFKEIDENKDMQLSRE 93

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158293614|ref|XP_314956.4| AGAP008822-PA [Anopheles gambiae str. PEST] gi|157016793|gb|EAA10152.4| AGAP008822-PA [Anopheles gambiae str. PEST]

 Score =  117 bits (293), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 64/130 (49%), Positives = 76/130 (58%), Gaps = 11/130 (8%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQ 133
           DRDQPFTF LG GQVIKGWDQGLT+MCVGEKR LTIPP L YGDRGAGNVIPGG + V  
Sbjct: 61  DRDQPFTFQLGAGQVIKGWDQGLTDMCVGEKRMLTIPPELGYGDRGAGNVIPGGATLVFD 120

Query: 134 SEHSELEIS---TKFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSF 190
            E   +  S   T  F E+  NK +   R         +  E++  +     G +  +  
Sbjct: 121 VELINIGDSPPTTNVFKEIDENKDMQLSRE--------EVSEYLKKQMVAADGGQESEDI 172

Query: 191 KPHRAESEKL 200
           K   AE +KL
Sbjct: 173 KNMIAEHDKL 182

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332376793|gb|AEE63536.1| unknown [Dendroctonus ponderosae]

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/88 (63%), Positives = 64/88 (72%), Gaps = 13/88 (14%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQ 133
           DRDQPFTF LGVGQVIKGWDQGL +MCVGEKRKLTIPP+L YGDRGAGNVIPGG +    
Sbjct: 66  DRDQPFTFQLGVGQVIKGWDQGLLDMCVGEKRKLTIPPSLGYGDRGAGNVIPGGATL--- 122

Query: 134 SEHSELEI--------STKFFLELIPNK 153
             H E+E+        +T  F E+  +K
Sbjct: 123 --HFEVELINIGDSPPTTNVFKEIDGDK 148

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193606149|ref|XP_001944900.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP2-like [Acyrthosiphon pisum]

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 53/59 (89%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAV 131
           HDRDQPFTF LGVGQVIKGWD GLT+MCVGEKR+LTIP  LAYGDRGAGNVIPGG + V
Sbjct: 77  HDRDQPFTFQLGVGQVIKGWDLGLTKMCVGEKRRLTIPANLAYGDRGAGNVIPGGATLV 135

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|429327007|gb|AFZ78832.1| FK506-binding like protein [Coptotermes formosanus]

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/138 (46%), Positives = 83/138 (60%), Gaps = 13/138 (9%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVR 132
           +DRDQPFTF LGVGQVIKGWDQGL +MCVGEKRKLTIPP LAYGDRGAGNVIP   +   
Sbjct: 88  YDRDQPFTFQLGVGQVIKGWDQGLRDMCVGEKRKLTIPPQLAYGDRGAGNVIPPDATLTF 147

Query: 133 QSEHSELEIS---TKFFLELIPNKFLHWDR----RFTQKGPMAKNREHIAHRARRDRGKR 185
           + +   +  S      F E+  +K L   R     + +K  +A ++E +A     D  KR
Sbjct: 148 EVDLINIGDSPPPVNVFKEIDADKDLMLSREEVSEYLKKQMVAADQEGVAE---SDEVKR 204

Query: 186 RIQSFKPHRAESEKLYAH 203
            ++    H    E+++ H
Sbjct: 205 MLED---HDKLVEEIFQH 219

Source: Coptotermes formosanus

Species: Coptotermes formosanus

Genus: Coptotermes

Family: Rhinotermitidae

Order: Isoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239793673|dbj|BAH72940.1| ACYPI003483 [Acyrthosiphon pisum]

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/63 (80%), Positives = 54/63 (85%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVR 132
           HDRDQPFTF LGVGQVIKGWD GLT+MCVGEKR+LTIP  LAYGDRGAGNVIPGG + V 
Sbjct: 77  HDRDQPFTFQLGVGQVIKGWDLGLTKMCVGEKRRLTIPANLAYGDRGAGNVIPGGATLVF 136

Query: 133 QSE 135
             E
Sbjct: 137 DVE 139

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345497242|ref|XP_001599993.2| PREDICTED: FK506-binding protein 2-like [Nasonia vitripennis]

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 48/56 (85%), Positives = 51/56 (91%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLS 129
           DRDQPFTF LGVGQVIKGWDQGL +MCV EKRKLTIPP+L YGDRGAGNVIPGG +
Sbjct: 65  DRDQPFTFQLGVGQVIKGWDQGLLDMCVSEKRKLTIPPSLGYGDRGAGNVIPGGAT 120

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350415003|ref|XP_003490500.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP14-like [Bombus impatiens]

 Score =  111 bits (278), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 48/62 (77%), Positives = 54/62 (87%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQ 133
           DRDQPFTF LGVGQVIKGWDQGL +MCVGEKRKLTIPP L YG++GAGNVIPGG + + +
Sbjct: 84  DRDQPFTFQLGVGQVIKGWDQGLVDMCVGEKRKLTIPPELGYGEKGAGNVIPGGATLLFE 143

Query: 134 SE 135
            E
Sbjct: 144 VE 145

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
FB|FBgn0010470	256	Fkbp13 "Fkbp13" [Drosophila me	0.163	0.203	0.865	4.9e-21
ASPGD|ASPL0000031551	135	FKBP4 [Emericella nidulans (ta	0.210	0.496	0.617	2.8e-18
UNIPROTKB|Q5ATN7	135	fkbB "FK506-binding protein 2"	0.210	0.496	0.617	2.8e-18
ZFIN|ZDB-GENE-040912-126	138	fkbp2 "FK506 binding protein 2	0.206	0.478	0.651	2.8e-18
DICTYBASE|DDB_G0282267	133	DDB_G0282267 "FKBP-type peptid	0.166	0.398	0.716	4.1e-17
UNIPROTKB|P73037	201	ytfC "Peptidyl-prolyl cis-tran	0.163	0.258	0.75	4.1e-17
UNIPROTKB|P26885	142	FKBP2 "Peptidyl-prolyl cis-tra	0.219	0.492	0.585	6.7e-17
UNIPROTKB|A8J746	143	FKB15-1 "Peptidyl-prolyl cis-t	0.181	0.405	0.672	6.7e-17
UNIPROTKB|Q5N801	158	P0004D12.26 "Peptidyl-prolyl c	0.197	0.398	0.619	6.7e-17
UNIPROTKB|G1K1P8	162	FKBP2 "Peptidyl-prolyl cis-tra	0.206	0.407	0.606	1.1e-16

FB|FBgn0010470 Fkbp13 "Fkbp13" [Drosophila melanogaster (taxid:7227)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 45/52 (86%), Positives = 46/52 (88%)

Query:    74 DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
             DRDQPFTF LG GQVIKGWDQGL  MCVGEKRKLTIPP L YGD+GAGNVIP
Sbjct:   107 DRDQPFTFQLGAGQVIKGWDQGLLNMCVGEKRKLTIPPQLGYGDQGAGNVIP 158

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS;IBA

GO:0005528 "FK506 binding" evidence=ISS;IBA

GO:0006457 "protein folding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005615 "extracellular space" evidence=IDA

GO:0002121 "inter-male aggressive behavior" evidence=IMP

GO:0046716 "muscle cell homeostasis" evidence=IGI;IMP

GO:0016020 "membrane" evidence=IBA

GO:0018208 "peptidyl-proline modification" evidence=IBA

ASPGD|ASPL0000031551 FKBP4 [Emericella nidulans (taxid:162425)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 42/68 (61%), Positives = 50/68 (73%)

Query:    73 HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVR 132
             +DR  PF F LG G+VIKGWD+GL +MCVGEKR LTIPP   YGDRG G  IPGG + + 
Sbjct:    62 YDRGTPFKFKLGAGRVIKGWDEGLLDMCVGEKRTLTIPPEYGYGDRGIGP-IPGGATLIF 120

Query:   133 QSEHSELE 140
             Q+E  E+E
Sbjct:   121 QTELLEIE 128

GO:0097308 "cellular response to farnesol" evidence=IEP

GO:0006457 "protein folding" evidence=IEA

GO:0005528 "FK506 binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q5ATN7 fkbB "FK506-binding protein 2" [Aspergillus nidulans FGSC A4 (taxid:227321)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 42/68 (61%), Positives = 50/68 (73%)

Query:    73 HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVR 132
             +DR  PF F LG G+VIKGWD+GL +MCVGEKR LTIPP   YGDRG G  IPGG + + 
Sbjct:    62 YDRGTPFKFKLGAGRVIKGWDEGLLDMCVGEKRTLTIPPEYGYGDRGIGP-IPGGATLIF 120

Query:   133 QSEHSELE 140
             Q+E  E+E
Sbjct:   121 QTELLEIE 128

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

ZFIN|ZDB-GENE-040912-126 fkbp2 "FK506 binding protein 2" [Danio rerio (taxid:7955)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 43/66 (65%), Positives = 48/66 (72%)

Query:    75 RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQS 134
             R+QPFTFTLG GQVIKGWDQGL  MC GEKRKL IP  L YGDRGA   IPGG + + + 
Sbjct:    68 RNQPFTFTLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGDRGAPPKIPGGATLIFEV 127

Query:   135 EHSELE 140
             E   +E
Sbjct:   128 ELLNIE 133

GO:0006457 "protein folding" evidence=IEA

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IBA

GO:0018208 "peptidyl-proline modification" evidence=IBA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=IEA;IBA

GO:0016020 "membrane" evidence=IBA

GO:0005528 "FK506 binding" evidence=IBA

GO:0016853 "isomerase activity" evidence=IEA

DICTYBASE|DDB_G0282267 DDB_G0282267 "FKBP-type peptidylprolyl cis-trans isomerase (PPIase)" [Dictyostelium discoideum (taxid:44689)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 38/53 (71%), Positives = 43/53 (81%)

Query:    74 DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPG 126
             DR  PF F +GVGQVIKGWDQG+  MCVGEKRKL IPP+L YG +GAG+ IPG
Sbjct:    67 DRGTPFEFKIGVGQVIKGWDQGVLGMCVGEKRKLIIPPSLGYGQQGAGDKIPG 119

GO:0006457 "protein folding" evidence=IEA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=IEA;IBA

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IEA;IBA

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0018208 "peptidyl-proline modification" evidence=IBA

GO:0016020 "membrane" evidence=IBA

GO:0005528 "FK506 binding" evidence=IBA

GO:0016853 "isomerase activity" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|P73037 ytfC "Peptidyl-prolyl cis-trans isomerase" [Synechocystis sp. PCC 6803 substr. Kazusa (taxid:1111708)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 39/52 (75%), Positives = 44/52 (84%)

Query:    74 DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
             DR++PFTFT+GVGQVIKGWD+G+  M VG KRKL IPP LAYG RGAG VIP
Sbjct:   135 DRNKPFTFTIGVGQVIKGWDEGVATMQVGGKRKLIIPPDLAYGSRGAGGVIP 186

GO:0030288 "outer membrane-bounded periplasmic space" evidence=IDA

UNIPROTKB|P26885 FKBP2 "Peptidyl-prolyl cis-trans isomerase FKBP2" [Homo sapiens (taxid:9606)]

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 41/70 (58%), Positives = 50/70 (71%)

Query:    75 RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQS 134
             ++QPF F+LG GQVIKGWDQGL  MC GEKRKL IP  L YG+RGA   IPGG + V + 
Sbjct:    72 QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEV 131

Query:   135 EHSELEISTK 144
             E  ++E  T+
Sbjct:   132 ELLKIERRTE 141

GO:0006457 "protein folding" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=IBA

GO:0005528 "FK506 binding" evidence=IBA

GO:0016020 "membrane" evidence=IBA

GO:0018208 "peptidyl-proline modification" evidence=IBA

GO:0005783 "endoplasmic reticulum" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=IBA

UNIPROTKB|A8J746 FKB15-1 "Peptidyl-prolyl cis-trans isomerase" [Chlamydomonas reinhardtii (taxid:3055)]

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 39/58 (67%), Positives = 44/58 (75%)

Query:    74 DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAV 131
             DR+QPFTFTLG G VIKGWDQGL  MCVGEKRKL IP  + YGD G+   IPGG + +
Sbjct:    75 DRNQPFTFTLGRGSVIKGWDQGLLGMCVGEKRKLKIPSHMGYGDSGSPPKIPGGATLI 132

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|Q5N801 P0004D12.26 "Peptidyl-prolyl cis-trans isomerase" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 39/63 (61%), Positives = 46/63 (73%)

Query:    73 HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVR 132
             +DR  PF FTLG GQVIKGWDQGL  MCVGEKRKL IP  + YG+RG+   IPGG + + 
Sbjct:    79 YDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGATLIF 138

Query:   133 QSE 135
              +E
Sbjct:   139 DTE 141

GO:0000413 "protein peptidyl-prolyl isomerization" evidence=ISS

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS

GO:0005528 "FK506 binding" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0018208 "peptidyl-proline modification" evidence=ISS

UNIPROTKB|G1K1P8 FKBP2 "Peptidyl-prolyl cis-trans isomerase" [Bos taurus (taxid:9913)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 40/66 (60%), Positives = 48/66 (72%)

Query:    75 RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQS 134
             ++QPF F+LG GQVIKGWDQGL  MC GEKRKL IP  L YG+RGA   IPGG + V + 
Sbjct:    92 QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEV 151

Query:   135 EHSELE 140
             E  ++E
Sbjct:   152 ELLKIE 157

GO:0006457 "protein folding" evidence=IEA

GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2UPT7	FKBP2_ASPOR	5, ., 2, ., 1, ., 8	0.5396	0.1943	0.4626	yes	N/A
O42993	FKBP_SCHPO	5, ., 2, ., 1, ., 8	0.5576	0.1630	0.4642	yes	N/A
Q4WHX4	FKBP2_ASPFU	5, ., 2, ., 1, ., 8	0.5588	0.2100	0.5	yes	N/A
Q5ATN7	FKBP2_EMENI	5, ., 2, ., 1, ., 8	0.6176	0.2100	0.4962	yes	N/A
P26885	FKBP2_HUMAN	5, ., 2, ., 1, ., 8	0.5774	0.2225	0.5	yes	N/A
Q32PA9	FKBP2_BOVIN	5, ., 2, ., 1, ., 8	0.6060	0.2068	0.4714	yes	N/A
P45878	FKBP2_MOUSE	5, ., 2, ., 1, ., 8	0.6060	0.2068	0.4714	yes	N/A
P56989	FKBP_NEIMA	5, ., 2, ., 1, ., 8	0.6923	0.1630	0.4770	yes	N/A
P0A0W2	FKBP_NEIMB	5, ., 2, ., 1, ., 8	0.6730	0.1630	0.4770	yes	N/A
Q6BP84	FKBP2_DEBHA	5, ., 2, ., 1, ., 8	0.5833	0.2225	0.5259	yes	N/A
Q754K8	FKBP_ASHGO	5, ., 2, ., 1, ., 8	0.5769	0.1630	0.4561	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	5.2.1	LOW CONFIDENCE prediction!
4th Layer	5.2.1.8	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	319
pfam00254	94	pfam00254, FKBP_C, FKBP-type peptidyl-prolyl cis-t	1e-25
COG0545	205	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans	2e-22
PRK11570	206	PRK11570, PRK11570, peptidyl-prolyl cis-trans isom	7e-10
COG1047	174	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans	5e-09
PRK10902	269	PRK10902, PRK10902, FKBP-type peptidyl-prolyl cis-	7e-07

>gnl|CDD|215821 pfam00254, FKBP_C, FKBP-type peptidyl-prolyl cis-trans isomerase

 Score = 98.1 bits (245), Expect = 1e-25
 Identities = 39/56 (69%), Positives = 42/56 (75%), Gaps = 1/56 (1%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG-AGNVIPGG 127
            DR +PF FTLG GQVI GWD+GL  M VGEKRKLTIPP LAYG+ G AG VIP  
Sbjct: 29  KDRGKPFEFTLGSGQVIPGWDEGLLGMKVGEKRKLTIPPELAYGEEGLAGGVIPPN 84

Length = 94

>gnl|CDD|223619 COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 92.1 bits (229), Expect = 2e-22
 Identities = 34/53 (64%), Positives = 37/53 (69%), Gaps = 2/53 (3%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           +DR QP  F LG   VI GWD+GL  M VG KRKLTIPP LAYG+RG   VIP
Sbjct: 140 YDRGQPAEFPLG--GVIPGWDEGLQGMKVGGKRKLTIPPELAYGERGVPGVIP 190

Length = 205

>gnl|CDD|183207 PRK11570, PRK11570, peptidyl-prolyl cis-trans isomerase; Provisional

 Score = 57.5 bits (139), Expect = 7e-10
 Identities = 28/51 (54%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 75  RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           R +P  F   V  VI GW + LT M VG K +LTIP  LAYG+RGAG  IP
Sbjct: 143 RGEPAEFP--VNGVIPGWIEALTLMPVGSKWELTIPHELAYGERGAGASIP 191

Length = 206

>gnl|CDD|223976 COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]

 Score = 54.6 bits (132), Expect = 5e-09
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDR 118
            +   P TF +G GQ+I G ++ L    VGE+  + IPP  A+G+ 
Sbjct: 27  DENYGPLTFIVGAGQLIPGLEEALLGKEVGEEFTVEIPPEDAFGEY 72

Length = 174

>gnl|CDD|236791 PRK10902, PRK10902, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

 Score = 49.4 bits (118), Expect = 7e-07
 Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 6/54 (11%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPG 126
           + R +P +F L    VI GW +GL  +  G K KL IPP LAYG  G    +PG
Sbjct: 185 YTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAG----VPG 232

Length = 269

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	319
KOG0543|consensus	397		100.0
KOG0545|consensus	329		100.0
KOG0544|consensus	108		99.95
COG0545	205	FkpA FKBP-type peptidyl-prolyl cis-trans isomerase	99.93
KOG0549|consensus	188		99.92
PRK11570	206	peptidyl-prolyl cis-trans isomerase; Provisional	99.85
TIGR03516	177	ppisom_GldI peptidyl-prolyl isomerase, gliding mot	99.85
KOG0552|consensus	226		99.82
PF00254	94	FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomer	99.79
PRK10902	269	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	99.79
PRK15095	156	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	99.57
COG1047	174	SlpA FKBP-type peptidyl-prolyl cis-trans isomerase	99.41
PRK10737	196	FKBP-type peptidyl-prolyl cis-trans isomerase; Pro	99.37
KOG0543|consensus	397		99.17
TIGR00115	408	tig trigger factor. Trigger factor is a ribosome-a	99.03
COG0544	441	Tig FKBP-type peptidyl-prolyl cis-trans isomerase	98.95
KOG4234|consensus	271		98.86
PRK01490	435	tig trigger factor; Provisional	98.84
KOG0546|consensus	372		98.55
KOG0553|consensus	304		98.46
KOG0547|consensus	606		98.38
KOG0548|consensus	539		98.15
TIGR00990	615	3a0801s09 mitochondrial precursor proteins import	98.11
KOG4648|consensus	536		97.8
KOG0551|consensus	390		97.7
KOG0550|consensus	486		97.44
PLN03088	356	SGT1, suppressor of G2 allele of SKP1; Provisional	97.38
KOG0376|consensus	476		97.27
KOG0549|consensus	188		97.17
KOG0548|consensus	539		96.24
KOG0624|consensus	504		95.73
PF13414	69	TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A	95.26
PF14559	68	TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN	94.85
KOG0544|consensus	108		94.26
PF13371	73	TPR_9: Tetratricopeptide repeat	93.83
PF13432	65	TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL	93.81
KOG4642|consensus	284		92.63
TIGR02552	135	LcrH_SycD type III secretion low calcium response	91.11
PF00515	34	TPR_1: Tetratricopeptide repeat; InterPro: IPR0014	90.88
PRK15359	144	type III secretion system chaperone protein SscB;	90.72
PRK15359	144	type III secretion system chaperone protein SscB;	89.42
PF13431	34	TPR_17: Tetratricopeptide repeat	89.19
PLN03088	356	SGT1, suppressor of G2 allele of SKP1; Provisional	86.72
PF00254	94	FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomer	85.5
KOG1308|consensus	377		84.72
PF14853	53	Fis1_TPR_C: Fis1 C-terminal tetratricopeptide repe	81.13

>KOG0543|consensus

Probab=100.00  E-value=3.1e-54  Score=407.56  Aligned_cols=294  Identities=21%  Similarity=0.244  Sum_probs=251.7

Q ss_pred             cccccCCCCCCCCCCCCCCCCCCeeecccceE----EEEeecCcC--CCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCC
Q psy5048           5 LLLPFGENRNPFYKTPCIRPRSTLSLSPYSLS----LILPRRAEN--LKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQP   78 (319)
Q Consensus         5 ~~~~~g~~g~~~~~~p~Ipp~atl~~d~~lv~----~~i~~~G~G--~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p   78 (319)
                      .-|++|+.|+|    |.||++++|.|++++++    -.|+++|.|  .+|..+..|.|| |.|++.|+ +|+++..   +
T Consensus        56 ~tm~~g~~~~p----p~ip~~a~l~fe~el~Dg~iiKriir~G~gd~~~P~~g~~V~v~-~~G~~~~~-~f~~~~~---~  126 (397)
T KOG0543|consen   56 ATMKKGEAGSP----PKIPSNATLLFEVELLDGGIIKRIIREGEGDYSRPNKGAVVKVH-LEGELEDG-VFDQREL---R  126 (397)
T ss_pred             ccccccccCCC----CCCCCCcceeeeecccCCceEEeeeecCCCCCCCCCCCcEEEEE-EEEEECCc-ceecccc---c
Confidence            44788999999    99999999999999744    568889999  799999999997 99999777 7777533   4


Q ss_pred             eEEeeCC-CcccccHhHhhhccccCcEEEEEeCCCCCCCC-CCCCCCCCCCCeEEEEEEEeeeeeccchhhccCccccch
Q psy5048          79 FTFTLGV-GQVIKGWDQGLTEMCVGEKRKLTIPPALAYGD-RGAGNVIPGGLSAVRQSEHSELEISTKFFLELIPNKFLH  156 (319)
Q Consensus        79 ~~f~lG~-~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~-~g~~~~Ip~~~~l~feVeL~~v~~~~~~~~~m~~eek~~  156 (319)
                      |+|.+|+ ..+|.||+.+|..|++||++.|+|+|.|+||. -+.++.||||++|.|+|+|++|....+..|.|..+|++.
T Consensus       127 fe~~~Ge~~~vi~Gle~al~~M~~GE~a~v~i~~~YayG~~~~~~p~IPPnA~l~yEVeL~~f~~~~~~s~~~~~~e~l~  206 (397)
T KOG0543|consen  127 FEFGEGEDIDVIEGLEIALRMMKVGEVALVTIDPKYAYGEEGGEPPLIPPNATLLYEVELLDFELKEDESWKMFAEERLE  206 (397)
T ss_pred             eEEecCCccchhHHHHHHHHhcCccceEEEEeCcccccCCCCCCCCCCCCCceEEEEEEEEeeecCcccccccchHHHHH
Confidence            8888888 58999999999999999999999999999994 456788999999999999999996565779999999999


Q ss_pred             hhhhhhhcCCcccccchHHHHHHH-Hhhhhhcc---cCCc---chhHHHHHHHhhHH--HHHHhcccchhHhHHhhhhcc
Q psy5048         157 WDRRFTQKGPMAKNREHIAHRARR-DRGKRRIQ---SFKP---HRAESEKLYAHCSS--AYALLVKKTPSIHNCFLLSTK  227 (319)
Q Consensus       157 ~a~~~ke~Gn~~~~~~~~~~~~~~-~~~k~~~~---~~k~---~~~~~~~l~~~~~~--~~~~~~~~~~a~~~c~~vl~~  227 (319)
                      .|.++|+.||.+|++++|..+... +.......   +..+   +......+-+++|.  |+.++..|..|+.+|++||+.
T Consensus       207 ~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~kvLe~  286 (397)
T KOG0543|consen  207 AADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNKVLEL  286 (397)
T ss_pred             HHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHHHHhc
Confidence            999999999999999999755432 22111111   1111   22334445555555  557779999999999999999


Q ss_pred             ccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHHHHHHHHhcccCCCCC
Q psy5048         228 SMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFFLFYNMSSP  299 (319)
Q Consensus       228 ~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~~y~~mF~~~~~~  299 (319)
                      +|       +|+|||||||++++.+++|+        |++++|+|++|++||++|++++++++.+||++|+|||+++++.
T Consensus       287 ~~-------~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nka~~~el~~l~~k~~~~~~kekk~y~~mF~k~~~~  359 (397)
T KOG0543|consen  287 DP-------NNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNKAARAELIKLKQKIREYEEKEKKMYANMFAKLAEE  359 (397)
T ss_pred             CC-------CchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence            99       99999999999999999997        9999999999999999999999999999999999999999999


Q ss_pred             CchhhhhhcccCCCC
Q psy5048         300 LNKVNAYLCSESEHN  314 (319)
Q Consensus       300 ~~~~~~~~~~~~~~~  314 (319)
                      .+|...-++++++-+
T Consensus       360 ~~k~~s~~~~~~~~~  374 (397)
T KOG0543|consen  360 SAKTKSEAALEDKPK  374 (397)
T ss_pred             ccccccchhcccCcc
Confidence            999999999998765

>KOG0545|consensus

Probab=100.00  E-value=2.3e-38  Score=281.94  Aligned_cols=260  Identities=12%  Similarity=0.023  Sum_probs=222.8

Q ss_pred             eeecccceEEEEeecCcCCCCC--CCCcEEEEEEEEEEeC--CcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCc
Q psy5048          28 LSLSPYSLSLILPRRAENLKPY--VNVKICVSSFKPTFKL--TLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGE  103 (319)
Q Consensus        28 l~~d~~lv~~~i~~~G~G~~p~--~~~~v~v~~y~~~l~d--g~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE  103 (319)
                      +..+++.|.-.++.+|.|.-|.  +|..++|| |.....|  ++++|+|+..|+|+++++|+.+.+|.||..|.+|+++|
T Consensus         5 a~l~~~gv~Kril~~G~g~l~e~~dGTrv~FH-frtl~~~e~~tviDDsRk~gkPmeiiiGkkFkL~VwE~il~tM~v~E   83 (329)
T KOG0545|consen    5 ALLNVEGVKKRILHGGTGELPEFIDGTRVIFH-FRTLKCDEERTVIDDSRKVGKPMEIIIGKKFKLEVWEIILTTMRVHE   83 (329)
T ss_pred             hhccchhhhHhhccCCCccCccccCCceEEEE-EEecccCcccccccchhhcCCCeEEeeccccccHHHHHHHHHHhhhh
Confidence            3445666777889999998776  56777775 7776655  45999999999999999999999999999999999999


Q ss_pred             EEEEEeCCCC-------------------------------------CCCCCCCCCCCCCCCeEEEEEEEeeeeecc---
Q psy5048         104 KRKLTIPPAL-------------------------------------AYGDRGAGNVIPGGLSAVRQSEHSELEIST---  143 (319)
Q Consensus       104 ~~~v~i~p~~-------------------------------------ayG~~g~~~~Ip~~~~l~feVeL~~v~~~~---  143 (319)
                      ++.|+|...+                                     +.|+.+++.+....++|+|.|+|+.|+.|.   
T Consensus        84 vaqF~~d~~~~vqYPfvsksLRdia~GK~p~e~~~H~Cg~a~m~~~~glGyedLDeL~knPqpL~FviellqVe~P~qYq  163 (329)
T KOG0545|consen   84 VAQFWCDTIHTVQYPFVSKSLRDIAQGKDPTEWHRHCCGLANMFAYHGLGYEDLDELQKNPQPLVFVIELLQVEAPSQYQ  163 (329)
T ss_pred             HHHhhhhhhheeechhHHHHHHHHhcCCCcchhhhhhhhhHHHHHhcCCChhhHHHHhhCCCceEeehhhhhccCchhhc
Confidence            9999887533                                     336666666777889999999999999766   


Q ss_pred             chhhccCccccchhhhhhhhcCCcccccchHH-----HHHHHHhhhhhcccCCcchhHHHHHHHhhHH-------HHHHh
Q psy5048         144 KFFLELIPNKFLHWDRRFTQKGPMAKNREHIA-----HRARRDRGKRRIQSFKPHRAESEKLYAHCSS-------AYALL  211 (319)
Q Consensus       144 ~~~~~m~~eek~~~a~~~ke~Gn~~~~~~~~~-----~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~-------~~~~~  211 (319)
                      .+.|+|+.+||+.+++.++++||.+|+.++|.     ++.+..+.++.+..+||.+.+|.+|......       |....
T Consensus       164 ~e~WqlsddeKmkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLllNy~QC~L~~  243 (329)
T KOG0545|consen  164 RETWQLSDDEKMKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLLLNYCQCLLKK  243 (329)
T ss_pred             cccccCCchHhhhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHHHhHHHHHhhH
Confidence            56799999999999999999999999999886     3444567888889999999999888755443       44555


Q ss_pred             cccchhHhHHhhhhccccccccCCCCChhHHHHHHH-HHHhcCccc-------cccCCCC-hhhHHHHHHHHHHHHhHhH
Q psy5048         212 VKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYT-RLALLLPFL-------QYEFPPE-QSQCLPLLGIRAQHQRGHM  282 (319)
Q Consensus       212 ~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~-~~~~~~~~~-------a~~~dP~-n~~i~~el~~l~~~~k~~~  282 (319)
                      ..+-.++++|+.||.++|       .|||||||||+ +++.|++.+       +|++||+ .+.|.+||+.|..++++.+
T Consensus       244 ~e~yevleh~seiL~~~~-------~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldpslasvVsrElr~le~r~~ek~  316 (329)
T KOG0545|consen  244 EEYYEVLEHCSEILRHHP-------GNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPSLASVVSRELRLLENRMAEKQ  316 (329)
T ss_pred             HHHHHHHHHHHHHHhcCC-------chHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHhh
Confidence            888889999999999999       99999999999 667798876       9999999 7899999999999999999


Q ss_pred             HHHHHHHHhcccC
Q psy5048         283 ITQGSLYFFLFYN  295 (319)
Q Consensus       283 ~kek~~y~~mF~~  295 (319)
                      ..+|-.|++||+.
T Consensus       317 ~edr~~~~kmfs~  329 (329)
T KOG0545|consen  317 EEDRLRCRKMFSQ  329 (329)
T ss_pred             hHHHHHHHHhcCC
Confidence            9999999999973

>KOG0544|consensus

Probab=99.95  E-value=2.1e-27  Score=181.26  Aligned_cols=105  Identities=34%  Similarity=0.547  Sum_probs=99.7

Q ss_pred             eEEEEeecCcC-CCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCC
Q psy5048          35 LSLILPRRAEN-LKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPAL  113 (319)
Q Consensus        35 v~~~i~~~G~G-~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~  113 (319)
                      |+..++..|.| ..|..|+.|++| |++++.||+.||||++++.||.|.+|.+.+|.||++++..|.+||++.++|+|++
T Consensus         3 v~~~~i~~Gdg~tfpK~Gqtvt~h-Ytg~L~dG~kfDSs~dr~kPfkf~IGkgeVIkGwdegv~qmsvGekakLti~pd~   81 (108)
T KOG0544|consen    3 VEKQVISPGDGRTFPKKGQTVTVH-YTGTLQDGKKFDSSRDRGKPFKFKIGKGEVIKGWDEGVAQMSVGEKAKLTISPDY   81 (108)
T ss_pred             ceeEEeeCCCCcccCCCCCEEEEE-EEeEecCCcEeecccccCCCeeEEecCcceeechhhcchhccccccceeeecccc
Confidence            56778899999 588889999886 9999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048         114 AYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       114 ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      |||..|.+..||||++|+|+|||++++
T Consensus        82 aYG~~G~p~~IppNatL~FdVEll~v~  108 (108)
T KOG0544|consen   82 AYGPRGHPGGIPPNATLVFDVELLKVN  108 (108)
T ss_pred             ccCCCCCCCccCCCcEEEEEEEEEecC
Confidence            999999999999999999999999874

>COG0545 FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]

Probab=99.93  E-value=9.4e-26  Score=196.65  Aligned_cols=109  Identities=39%  Similarity=0.571  Sum_probs=102.3

Q ss_pred             eecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEE
Q psy5048          29 SLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLT  108 (319)
Q Consensus        29 ~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~  108 (319)
                      ......|.|.++..|.|..|..++.|.+| |+|++.||++||+|+.+++|+.|.||  ++|+||.+||.+|++|++++++
T Consensus        97 ~~~~sgl~y~~~~~G~G~~~~~~~~V~vh-Y~G~l~~G~vFDsS~~rg~p~~f~l~--~vI~Gw~egl~~M~vG~k~~l~  173 (205)
T COG0545          97 KTLPSGLQYKVLKAGDGAAPKKGDTVTVH-YTGTLIDGTVFDSSYDRGQPAEFPLG--GVIPGWDEGLQGMKVGGKRKLT  173 (205)
T ss_pred             eECCCCcEEEEEeccCCCCCCCCCEEEEE-EEEecCCCCccccccccCCCceeecC--CeeehHHHHHhhCCCCceEEEE
Confidence            44556677888999999999999999997 99999999999999999999999996  9999999999999999999999


Q ss_pred             eCCCCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048         109 IPPALAYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       109 i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      |||++|||..|.++.||||++|+|+|+|++|.
T Consensus       174 IP~~laYG~~g~~g~Ippns~LvFeVeLl~v~  205 (205)
T COG0545         174 IPPELAYGERGVPGVIPPNSTLVFEVELLDVK  205 (205)
T ss_pred             eCchhccCcCCCCCCCCCCCeEEEEEEEEecC
Confidence            99999999999888899999999999999873

>KOG0549|consensus

Probab=99.92  E-value=4.8e-25  Score=188.44  Aligned_cols=136  Identities=38%  Similarity=0.529  Sum_probs=110.1

Q ss_pred             cccCCCCCCCCCCCCCCCCCCeeecc---------cceEEEEeec--CcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccC
Q psy5048           7 LPFGENRNPFYKTPCIRPRSTLSLSP---------YSLSLILPRR--AENLKPYVNVKICVSSFKPTFKLTLVAMRIHDR   75 (319)
Q Consensus         7 ~~~g~~g~~~~~~p~Ipp~atl~~d~---------~lv~~~i~~~--G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~   75 (319)
                      ||||..|+...-.+.|+-...+.|.+         +.+++.++..  ........||.+.+| |++.+.||++||||+.+
T Consensus        33 l~fg~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~I~v~~~p~~C~~kak~GD~l~~H-Y~g~leDGt~fdSS~~r  111 (188)
T KOG0549|consen   33 LGFGEGGRGDLNILVITILLVLLFRASAAEKWNPDEELQIGVLKKPEECPEKAKKGDTLHVH-YTGSLEDGTKFDSSYSR  111 (188)
T ss_pred             ccccccccccccceEEEeeeeehhhhhhhhhcCCCCceeEEEEECCccccccccCCCEEEEE-EEEEecCCCEEeeeccC
Confidence            68887777743333444333333322         3334434433  234566678999997 99999999999999999


Q ss_pred             CCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCCCCCCeEEEEEEEeeeeecc
Q psy5048          76 DQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQSEHSELEIST  143 (319)
Q Consensus        76 ~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~~~  143 (319)
                      ++|++|+||.+++|+||+++|.+|++||++.++|||+++||+.|.++.||++++|+|+|||+++...+
T Consensus       112 g~P~~f~LG~gqVIkG~Dqgl~gMCvGEkRkl~IPp~LgYG~~G~~~~IP~~A~LiFdiELv~i~~~~  179 (188)
T KOG0549|consen  112 GAPFTFTLGTGQVIKGWDQGLLGMCVGEKRKLIIPPHLGYGERGAPPKIPGDAVLIFDIELVKIERGP  179 (188)
T ss_pred             CCCEEEEeCCCceeccHhHHhhhhCcccceEEecCccccCccCCCCCCCCCCeeEEEEEEEEEeecCC
Confidence            99999999999999999999999999999999999999999999888899999999999999999754

>PRK11570 peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.85  E-value=7e-21  Score=169.86  Aligned_cols=109  Identities=32%  Similarity=0.409  Sum_probs=100.8

Q ss_pred             eecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEE
Q psy5048          29 SLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLT  108 (319)
Q Consensus        29 ~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~  108 (319)
                      ...+..+.+.++++|.|..|..++.|.+| |++++.||++||+++.++.|++|.+|  .+|+||+++|.+|++|+++.|+
T Consensus        98 ~~t~sGl~y~vi~~G~G~~p~~~d~V~v~-Y~g~l~dG~vfdss~~~g~P~~f~l~--~vipG~~eaL~~M~~G~k~~~~  174 (206)
T PRK11570         98 NSTESGLQFRVLTQGEGAIPARTDRVRVH-YTGKLIDGTVFDSSVARGEPAEFPVN--GVIPGWIEALTLMPVGSKWELT  174 (206)
T ss_pred             EECCCCcEEEEEeCCCCCCCCCCCEEEEE-EEEEECCCCEEEeccCCCCCeEEEee--chhhHHHHHHcCCCCCCEEEEE
Confidence            44556678888999999999999999996 99999999999999998899999995  7999999999999999999999


Q ss_pred             eCCCCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048         109 IPPALAYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       109 i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      |||+++||..|.++.|||+++|+|+|||++|.
T Consensus       175 IP~~lAYG~~g~~~~Ipp~s~Lif~veLl~i~  206 (206)
T PRK11570        175 IPHELAYGERGAGASIPPFSTLVFEVELLEIL  206 (206)
T ss_pred             ECHHHcCCCCCCCCCcCCCCeEEEEEEEEEEC
Confidence            99999999999887899999999999999873

>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated

Probab=99.85  E-value=1.4e-20  Score=164.25  Aligned_cols=108  Identities=19%  Similarity=0.207  Sum_probs=96.6

Q ss_pred             cccceEEEEe--ecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEE
Q psy5048          31 SPYSLSLILP--RRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLT  108 (319)
Q Consensus        31 d~~lv~~~i~--~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~  108 (319)
                      ....+.+.+.  ..|.|..|..++.|++| |.+++.||++|++++.. .|+.|.+|.+++++||+++|.+|++||++.|+
T Consensus        67 t~sGl~Y~v~~~~~g~g~~p~~gd~V~v~-Y~~~~~dG~v~~ss~~~-~P~~f~vg~~~vi~Gl~e~L~~Mk~Ge~~~~~  144 (177)
T TIGR03516        67 SQNGFWYYYNQKDTGEGTTPEFGDLVTFE-YDIRALDGDVIYSEEEL-GPQTYKVDQQDLFSGLRDGLKLMKEGETATFL  144 (177)
T ss_pred             CCCccEEEEEEecCCCCCcCCCCCEEEEE-EEEEeCCCCEEEeCCCC-CCEEEEeCCcchhHHHHHHHcCCCCCCEEEEE
Confidence            3444555555  45788899999999997 99999999999999864 49999999999999999999999999999999


Q ss_pred             eCCCCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048         109 IPPALAYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       109 i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      |||++|||..|..+.||||++|+|+|+|++|.
T Consensus       145 iP~~~AYG~~g~~~~Ippns~L~f~IeL~~i~  176 (177)
T TIGR03516       145 FPSHKAYGYYGDQNKIGPNLPIISTVTLLNIK  176 (177)
T ss_pred             ECHHHcCCCCCCCCCcCcCCcEEEEEEEEEec
Confidence            99999999999888899999999999999986

Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.

>KOG0552|consensus

Probab=99.82  E-value=8.9e-20  Score=162.74  Aligned_cols=105  Identities=33%  Similarity=0.520  Sum_probs=95.8

Q ss_pred             ccceEEEEeecCcCCCCCCCCcEEEEEEEEEEe-CCcEEeeeccCCCCeE-EeeCCCcccccHhHhhhccccCcEEEEEe
Q psy5048          32 PYSLSLILPRRAENLKPYVNVKICVSSFKPTFK-LTLVAMRIHDRDQPFT-FTLGVGQVIKGWDQGLTEMCVGEKRKLTI  109 (319)
Q Consensus        32 ~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~-dg~v~d~s~~~~~p~~-f~lG~~~~i~Gle~al~~Mk~GE~~~v~i  109 (319)
                      ...|.|..++-|.|..|..|..|.++ |.+++. +|.+||++.. +.|+. |.+|.+.+|+||+.+|.+|++|.+++|+|
T Consensus       119 ~~Gl~y~D~~vG~G~~a~~G~rV~v~-Y~Gkl~~~GkvFd~~~~-~kp~~~f~lg~g~VIkG~d~gv~GMkvGGkRrviI  196 (226)
T KOG0552|consen  119 PGGLRYEDLRVGSGPSAKKGKRVSVR-YIGKLKGNGKVFDSNFG-GKPFKLFRLGSGEVIKGWDVGVEGMKVGGKRRVII  196 (226)
T ss_pred             CCCcEEEEEEecCCCCCCCCCEEEEE-EEEEecCCCeEeecccC-CCCccccccCCCCCCchHHHhhhhhccCCeeEEEe
Confidence            33466777788999999999999986 999998 8999999876 45888 99999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCeEEEEEEEeee
Q psy5048         110 PPALAYGDRGAGNVIPGGLSAVRQSEHSEL  139 (319)
Q Consensus       110 ~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v  139 (319)
                      ||++|||..+.+. ||||++|+|+|||+.|
T Consensus       197 Pp~lgYg~~g~~~-IppnstL~fdVEL~~v  225 (226)
T KOG0552|consen  197 PPELGYGKKGVPE-IPPNSTLVFDVELLSV  225 (226)
T ss_pred             CccccccccCcCc-CCCCCcEEEEEEEEec
Confidence            9999999999884 9999999999999986

>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5

Probab=99.79  E-value=5.7e-19  Score=138.11  Aligned_cols=90  Identities=33%  Similarity=0.526  Sum_probs=84.2

Q ss_pred             CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCC-CCCCC
Q psy5048          47 KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGA-GNVIP  125 (319)
Q Consensus        47 ~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~-~~~Ip  125 (319)
                      .|..++.|.++ |.+++.||++|++++..+.|++|.+|.+.+++||+++|.+|++||++.|.|||+++||..+. ...||
T Consensus         4 ~~~~gd~V~i~-y~~~~~~g~~~~~~~~~~~~~~~~~g~~~~i~g~e~al~~m~~Ge~~~~~vp~~~ayg~~~~~~~~ip   82 (94)
T PF00254_consen    4 TPKEGDTVTIH-YTGRLEDGKVFDSSYQEGEPFEFRLGSGQVIPGLEEALIGMKVGEKREFYVPPELAYGEKGLEPPKIP   82 (94)
T ss_dssp             SBSTTSEEEEE-EEEEETTSEEEEETTTTTSEEEEETTSSSSSHHHHHHHTTSBTTEEEEEEEEGGGTTTTTTBCTTTBT
T ss_pred             cCCCCCEEEEE-EEEEECCCcEEEEeeecCcceeeeeccCccccchhhhcccccCCCEeeeEeCChhhcCccccCCCCcC
Confidence            48889999996 99999999999999888889999999999999999999999999999999999999999987 44599


Q ss_pred             CCCeEEEEEEEe
Q psy5048         126 GGLSAVRQSEHS  137 (319)
Q Consensus       126 ~~~~l~feVeL~  137 (319)
                      ++++|+|+|+|+
T Consensus        83 ~~~~l~f~Iell   94 (94)
T PF00254_consen   83 PNSTLVFEIELL   94 (94)
T ss_dssp             TTSEEEEEEEEE
T ss_pred             CCCeEEEEEEEC
Confidence            999999999986

2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....

>PRK10902 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.79  E-value=1.2e-18  Score=161.11  Aligned_cols=111  Identities=28%  Similarity=0.412  Sum_probs=101.2

Q ss_pred             eecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEE
Q psy5048          29 SLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLT  108 (319)
Q Consensus        29 ~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~  108 (319)
                      .-....+.+.++.+|.|..|..++.|.++ |++++.||++|++++.++.|+.|.+  +.+|+||+++|.+|++|+++.|+
T Consensus       142 ~~t~sGl~y~Vi~~G~G~~p~~gD~V~V~-Y~g~l~dG~vfdss~~~g~p~~f~l--~~vipG~~EaL~~Mk~Gek~~l~  218 (269)
T PRK10902        142 KTTSTGLLYKVEKEGTGEAPKDSDTVVVN-YKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPGWTEGLKNIKKGGKIKLV  218 (269)
T ss_pred             EECCCccEEEEEeCCCCCCCCCCCEEEEE-EEEEeCCCCEeeccccCCCceEEec--CCcchHHHHHHhcCCCCcEEEEE
Confidence            34566788889999999999999999996 9999999999999998889999998  46999999999999999999999


Q ss_pred             eCCCCCCCCCCCCCCCCCCCeEEEEEEEeeeeecc
Q psy5048         109 IPPALAYGDRGAGNVIPGGLSAVRQSEHSELEIST  143 (319)
Q Consensus       109 i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~~~  143 (319)
                      ||++++||..+.+ .||||++|+|+|+|++|..++
T Consensus       219 IP~~laYG~~g~~-gIppns~LvfeVeLl~V~~~~  252 (269)
T PRK10902        219 IPPELAYGKAGVP-GIPANSTLVFDVELLDVKPAP  252 (269)
T ss_pred             ECchhhCCCCCCC-CCCCCCcEEEEEEEEEeccCc
Confidence            9999999999876 599999999999999998644

>PRK15095 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.57  E-value=1e-14  Score=124.94  Aligned_cols=72  Identities=25%  Similarity=0.407  Sum_probs=65.8

Q ss_pred             CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCC
Q psy5048          47 KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG  119 (319)
Q Consensus        47 ~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g  119 (319)
                      .+..++.|.+| |++++.||++||+|+..+.|+.|.+|.+++++||+++|.+|++|+++.|.|||++|||..+
T Consensus         4 ~i~~~~~V~v~-Y~~~~~dG~v~dst~~~~~P~~f~~G~g~vi~gle~aL~gm~~Ge~~~v~ipp~~ayG~~d   75 (156)
T PRK15095          4 SVQSNSAVLVH-FTLKLDDGSTAESTRNNGKPALFRLGDGSLSEGLEQQLLGLKVGDKKTFSLEPEAAFGVPS   75 (156)
T ss_pred             ccCCCCEEEEE-EEEEeCCCCEEEECCCCCCCEEEEeCCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence            34567778886 9999999999999988788999999999999999999999999999999999999999765

>COG1047 SlpA FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]

Probab=99.41  E-value=1.1e-12  Score=112.93  Aligned_cols=70  Identities=26%  Similarity=0.408  Sum_probs=63.7

Q ss_pred             CCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCC
Q psy5048          49 YVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG  119 (319)
Q Consensus        49 ~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g  119 (319)
                      ..++-|.++ |++++.||++||+|.....|+.|++|.+++++|||+||.+|.+|++..|.|||+.|||.++
T Consensus         4 ~k~~~V~i~-Y~~~~~dg~v~Dtt~e~~~P~~~i~G~g~li~glE~al~g~~~Ge~~~V~IpPE~AfGe~~   73 (174)
T COG1047           4 EKGDVVSLH-YTLKVEDGEVVDTTDENYGPLTFIVGAGQLIPGLEEALLGKEVGEEFTVEIPPEDAFGEYD   73 (174)
T ss_pred             cCCCEEEEE-EEEEecCCcEEEcccccCCCeEEEecCCCcchhHHHHHhCCCCCceeEEEeCchHhcCCCC
Confidence            456667775 9999999999999987667999999999999999999999999999999999999999765

>PRK10737 FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional

Probab=99.37  E-value=2e-12  Score=114.24  Aligned_cols=69  Identities=17%  Similarity=0.313  Sum_probs=62.2

Q ss_pred             CCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCC
Q psy5048          49 YVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG  119 (319)
Q Consensus        49 ~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g  119 (319)
                      ..++.|+++ |+.++.||++|++|+. ..|++|++|.++++||||++|.+|.+|++..|+|+|+.|||.++
T Consensus         4 ~~~~vV~l~-Y~l~~~dG~v~dst~~-~~Pl~~~~G~g~lipglE~aL~G~~~Gd~~~v~l~peeAyGe~d   72 (196)
T PRK10737          4 AKDLVVSLA-YQVRTEDGVLVDESPV-SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD   72 (196)
T ss_pred             CCCCEEEEE-EEEEeCCCCEEEecCC-CCCeEEEeCCCcchHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence            455667775 9999999999999875 56999999999999999999999999999999999999999765

>KOG0543|consensus

Probab=99.17  E-value=4.2e-11  Score=114.55  Aligned_cols=81  Identities=30%  Similarity=0.471  Sum_probs=74.4

Q ss_pred             cCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCC
Q psy5048          42 RAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGA  120 (319)
Q Consensus        42 ~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~  120 (319)
                      +|+|. .|..|+.|.+| |++++.||+.||+|.+ +.|+.|.+|.+.+|.||+.++.+|+.              |+.+.
T Consensus         2 eg~g~~~p~~g~~v~~h-ytg~l~dgt~fdss~d-~~~~~~~lg~g~vi~~~~~gv~tm~~--------------g~~~~   65 (397)
T KOG0543|consen    2 EGTGTETPMTGDKVEVH-YTGTLLDGTKFDSSRD-GDPFKFDLGKGSVIKGWDLGVATMKK--------------GEAGS   65 (397)
T ss_pred             CCCCccCCCCCceeEEE-EeEEecCCeecccccC-CCceeeecCCCccccccccccccccc--------------cccCC
Confidence            56664 88899999996 9999999999999998 88999999999999999999999998              78888


Q ss_pred             CCCCCCCCeEEEEEEEee
Q psy5048         121 GNVIPGGLSAVRQSEHSE  138 (319)
Q Consensus       121 ~~~Ip~~~~l~feVeL~~  138 (319)
                      ++.||++++|.|+|+|++
T Consensus        66 pp~ip~~a~l~fe~el~D   83 (397)
T KOG0543|consen   66 PPKIPSNATLLFEVELLD   83 (397)
T ss_pred             CCCCCCCcceeeeecccC
Confidence            999999999999999843

>TIGR00115 tig trigger factor

Probab=99.03  E-value=6.6e-09  Score=102.07  Aligned_cols=99  Identities=17%  Similarity=0.264  Sum_probs=81.4

Q ss_pred             CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCCCCC
Q psy5048          48 PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG  127 (319)
Q Consensus        48 p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~Ip~~  127 (319)
                      +..|+.|++ +|+++. ||..|+++.  ..++.|.+|.+.+++||+++|.||++|++..|.++++.+|+..+..     |
T Consensus       147 ~~~gD~V~v-~~~~~~-dg~~~~~~~--~~~~~~~lg~~~~~~~~ee~L~G~k~Gd~~~~~v~~p~~~~~~~~~-----g  217 (408)
T TIGR00115       147 AEKGDRVTI-DFEGFI-DGEAFEGGK--AENFSLELGSGQFIPGFEEQLVGMKAGEEKEIKVTFPEDYHAEELA-----G  217 (408)
T ss_pred             cCCCCEEEE-EEEEEE-CCEECcCCC--CCCeEEEECCCCcchhHHHHhCCCCCCCeeEEEecCccccCcccCC-----C
Confidence            455777777 599976 898888763  4589999999999999999999999999999999999999877654     5


Q ss_pred             CeEEEEEEEeeeeeccchhhccCccccchhhhhh
Q psy5048         128 LSAVRQSEHSELEISTKFFLELIPNKFLHWDRRF  161 (319)
Q Consensus       128 ~~l~feVeL~~v~~~~~~~~~m~~eek~~~a~~~  161 (319)
                      .++.|+|+|.+|....      .|+-+.+++..+
T Consensus       218 k~~~f~v~i~~I~~~~------~peldDefak~~  245 (408)
T TIGR00115       218 KEATFKVTVKEVKEKE------LPELDDEFAKEL  245 (408)
T ss_pred             CeEEEEEEEEEeccCC------CCCCCHHHHHhc
Confidence            8999999999998532      344556677765

Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.

>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]

Probab=98.95  E-value=2.6e-08  Score=98.45  Aligned_cols=112  Identities=14%  Similarity=0.258  Sum_probs=88.8

Q ss_pred             CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCCCCC
Q psy5048          48 PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG  127 (319)
Q Consensus        48 p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~Ip~~  127 (319)
                      ...||.|++ +|.|+. ||..|.....  +.+.|+||.+.+||||+.+|.||+.|+...|.+..+..|....+.+     
T Consensus       158 a~~gD~v~I-Df~g~i-Dg~~fegg~a--e~~~l~lGs~~fipgFe~~LvG~k~Ge~k~i~vtFP~dy~a~~LaG-----  228 (441)
T COG0544         158 AENGDRVTI-DFEGSV-DGEEFEGGKA--ENFSLELGSGRFIPGFEDQLVGMKAGEEKDIKVTFPEDYHAEELAG-----  228 (441)
T ss_pred             cccCCEEEE-EEEEEE-cCeeccCccc--cCeEEEEcCCCchhhHHhhhccCcCCCeeEEEEEcccccchhHhCC-----
Confidence            667777877 699966 8988887543  4699999999999999999999999999999999888998887765     


Q ss_pred             CeEEEEEEEeeeeeccchhhccCccccchhhhhhhhcCCcccccchH
Q psy5048         128 LSAVRQSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMAKNREHI  174 (319)
Q Consensus       128 ~~l~feVeL~~v~~~~~~~~~m~~eek~~~a~~~ke~Gn~~~~~~~~  174 (319)
                      .+..|.|+|..|....      .++-+.++|+.+-...+.-..+.++
T Consensus       229 K~a~F~V~vkeVk~~e------lpEldDEfAk~~~~~~tL~~Lk~~~  269 (441)
T COG0544         229 KEATFKVKVKEVKKRE------LPELDDEFAKKLGEEDTLEELKEKL  269 (441)
T ss_pred             CceEEEEEEEEEeecC------CCCCCHHHHHhcCccccHHHHHHHH
Confidence            8899999999999533      5556667777776554443334433

>KOG4234|consensus

Probab=98.86  E-value=7.4e-09  Score=91.14  Aligned_cols=131  Identities=9%  Similarity=0.019  Sum_probs=93.8

Q ss_pred             cCcccc---chhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhh
Q psy5048         149 LIPNKF---LHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLS  225 (319)
Q Consensus       149 m~~eek---~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl  225 (319)
                      ++++++   +.-+..+|.+||.+|+.+.|+.+.. .+......-..--.++..-|+.+--.|..++.+|..+|..|++.+
T Consensus        83 ~~deek~k~~~kad~lK~EGN~~F~ngdyeeA~s-kY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKai  161 (271)
T KOG4234|consen   83 FSDEEKDKAIEKADSLKKEGNELFKNGDYEEANS-KYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAI  161 (271)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHhhhcccHHHHHH-HHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhH
Confidence            444444   3457889999999999999975432 111111111000112222333333335577899999999999999


Q ss_pred             ccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHHHHH
Q psy5048         226 TKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGS  287 (319)
Q Consensus       226 ~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~  287 (319)
                      +..|       .|.|||-|||.+|.-+.-|+        .+++||+++.++.-..+|..++.+.+++-|.
T Consensus       162 el~p-------ty~kAl~RRAeayek~ek~eealeDyKki~E~dPs~~ear~~i~rl~~~i~ernEkmKe  224 (271)
T KOG4234|consen  162 ELNP-------TYEKALERRAEAYEKMEKYEEALEDYKKILESDPSRREAREAIARLPPKINERNEKMKE  224 (271)
T ss_pred             hcCc-------hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCcchHHHHHHHHhcCHHHHHHHHHHHH
Confidence            9888       99999999999887665554        8999999999999999999999888887765

>PRK01490 tig trigger factor; Provisional

Probab=98.84  E-value=2.7e-08  Score=98.52  Aligned_cols=99  Identities=16%  Similarity=0.262  Sum_probs=81.3

Q ss_pred             CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCCCCC
Q psy5048          48 PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG  127 (319)
Q Consensus        48 p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~Ip~~  127 (319)
                      +..|+.|++ +|.+.. ||..|+++.  ..++.|.+|.+.+++||+++|.||++|++..|.++++..|+..+..     |
T Consensus       158 ~~~gD~V~v-d~~~~~-~g~~~~~~~--~~~~~~~lg~~~~~~~fee~L~G~k~Ge~~~~~~~~p~~~~~~~la-----g  228 (435)
T PRK01490        158 AENGDRVTI-DFVGSI-DGEEFEGGK--AEDFSLELGSGRFIPGFEEQLVGMKAGEEKTIDVTFPEDYHAEDLA-----G  228 (435)
T ss_pred             CCCCCEEEE-EEEEEE-CCEECcCCC--CCceEEEEcCCCcchhHHHHhCCCCCCCeeEEEecCccccccccCC-----C
Confidence            566777777 599987 888887653  3589999999999999999999999999999999999999887664     4


Q ss_pred             CeEEEEEEEeeeeeccchhhccCccccchhhhhh
Q psy5048         128 LSAVRQSEHSELEISTKFFLELIPNKFLHWDRRF  161 (319)
Q Consensus       128 ~~l~feVeL~~v~~~~~~~~~m~~eek~~~a~~~  161 (319)
                      .++.|.|+|.+|....      .|+-+.+++..+
T Consensus       229 k~~~f~v~v~~V~~~~------~pel~Defak~~  256 (435)
T PRK01490        229 KEATFKVTVKEVKEKE------LPELDDEFAKKL  256 (435)
T ss_pred             CeEEEEEEEEEeccCC------CCCCCHHHHHhc
Confidence            8999999999998532      345556677655

>KOG0546|consensus

Probab=98.55  E-value=1e-07  Score=90.12  Aligned_cols=135  Identities=12%  Similarity=-0.021  Sum_probs=95.5

Q ss_pred             ccchhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCc-------------chhHHHHHHHhhHHHHHHhcccchhHh
Q psy5048         153 KFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKP-------------HRAESEKLYAHCSSAYALLVKKTPSIH  219 (319)
Q Consensus       153 ek~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~-------------~~~~~~~l~~~~~~~~~~~~~~~~a~~  219 (319)
                      ..+..+..+++.||..++...+..+.+..........+.+             .......++.+...+..+...+..++-
T Consensus       217 ~~~~~~~~~k~~~~~~~kk~~~~~a~~k~~k~~r~~~~~s~~~~~e~~~~~~~~~~~r~~~~~n~~~~~lk~~~~~~a~~  296 (372)
T KOG0546|consen  217 KALEREEKKKNIGNKEFKKQRYREALAKYRKALRYLSEQSRDREKEQENRIPPLRELRFSIRRNLAAVGLKVKGRGGARF  296 (372)
T ss_pred             hhhhhhhhhhccchhhhhhccHhHHHHHHHHHhhhhcccccccccccccccccccccccccccchHHhcccccCCCccee
Confidence            3445678888999998888777644332211111111000             011111222222223356688888999


Q ss_pred             HHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHHHHHHHHh
Q psy5048         220 NCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFF  291 (319)
Q Consensus       220 ~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~~y~~  291 (319)
                      .|..+++.++       +++||+|||++++..+.+++        |...+|++++|..++....++.+.+++++++.+.+
T Consensus       297 ~~~~~~~~~~-------s~tka~~Rr~~~~~~~~~~~~a~~~~~~a~~~~p~d~~i~~~~~~~~~~~~~~~~~~~~~~~k  369 (372)
T KOG0546|consen  297 RTNEALRDER-------SKTKAHYRRGQAYKLLKNYDEALEDLKKAKQKAPNDKAIEEELENVRQKKKQYNRKQKKALSK  369 (372)
T ss_pred             ccccccccCh-------hhCcHHHHHHhHHHhhhchhhhHHHHHHhhccCcchHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence            9999999777       99999999999766655543        89999999999999999999999999999999999


Q ss_pred             ccc
Q psy5048         292 LFY  294 (319)
Q Consensus       292 mF~  294 (319)
                      ||+
T Consensus       370 ~~s  372 (372)
T KOG0546|consen  370 MFS  372 (372)
T ss_pred             hcC
Confidence            995

>KOG0553|consensus

Probab=98.46  E-value=3.3e-07  Score=85.06  Aligned_cols=121  Identities=14%  Similarity=0.142  Sum_probs=94.2

Q ss_pred             cCccccchhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccc
Q psy5048         149 LIPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKS  228 (319)
Q Consensus       149 m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~  228 (319)
                      .+++|....|+++|.+||.+.+.++|..++... .+..  .+.|..+   .++++--.|+..+..+..|++-|...+.+|
T Consensus        72 ~~~~e~~~~AE~LK~eGN~~m~~~~Y~eAv~kY-~~AI--~l~P~nA---VyycNRAAAy~~Lg~~~~AVkDce~Al~iD  145 (304)
T KOG0553|consen   72 LTPEEDKALAESLKNEGNKLMKNKDYQEAVDKY-TEAI--ELDPTNA---VYYCNRAAAYSKLGEYEDAVKDCESALSID  145 (304)
T ss_pred             cChHhHHHHHHHHHHHHHHHHHhhhHHHHHHHH-HHHH--hcCCCcc---hHHHHHHHHHHHhcchHHHHHHHHHHHhcC
Confidence            344478889999999999999999997665322 1111  1111111   234333346688899999999999999999


Q ss_pred             cccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhH
Q psy5048         229 MLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHM  282 (319)
Q Consensus       229 ~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~  282 (319)
                      |       +-.|||-|-|.++..++.++        ||++||+|...+.-|+...+++++..
T Consensus       146 p-------~yskay~RLG~A~~~~gk~~~A~~aykKaLeldP~Ne~~K~nL~~Ae~~l~e~~  200 (304)
T KOG0553|consen  146 P-------HYSKAYGRLGLAYLALGKYEEAIEAYKKALELDPDNESYKSNLKIAEQKLNEPK  200 (304)
T ss_pred             h-------HHHHHHHHHHHHHHccCcHHHHHHHHHhhhccCCCcHHHHHHHHHHHHHhcCCC
Confidence            9       99999999999888888886        79999999999999999999888766

>KOG0547|consensus

Probab=98.38  E-value=7.5e-07  Score=87.28  Aligned_cols=124  Identities=11%  Similarity=0.045  Sum_probs=89.4

Q ss_pred             hhhccCccccchhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhh
Q psy5048         145 FFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLL  224 (319)
Q Consensus       145 ~~~~m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~v  224 (319)
                      ....|++++++..|..+|.+||.+|..++|..++..... .  ...+|.+   --.+.+...|+..+..|..+++-|++.
T Consensus       102 ~~~a~~~e~~~k~A~~lK~~GN~~f~~kkY~eAIkyY~~-A--I~l~p~e---piFYsNraAcY~~lgd~~~Vied~TkA  175 (606)
T KOG0547|consen  102 QKKAMLKEERLKYAAALKTKGNKFFRNKKYDEAIKYYTQ-A--IELCPDE---PIFYSNRAACYESLGDWEKVIEDCTKA  175 (606)
T ss_pred             hhhccChHHHHHHHHHHHhhhhhhhhcccHHHHHHHHHH-H--HhcCCCC---chhhhhHHHHHHHHhhHHHHHHHHHHH
Confidence            346789999999999999999999999999766543211 1  1222222   124455555788899999999999999


Q ss_pred             hccccccccCCCCChhHHHHHHHHHHhcCccc---------cccCCCChhhHHHHHHHHHHHHhHh
Q psy5048         225 STKSMLTFARNQSTIPAWTHDYTRLALLLPFL---------QYEFPPEQSQCLPLLGIRAQHQRGH  281 (319)
Q Consensus       225 l~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~---------a~~~dP~n~~i~~el~~l~~~~k~~  281 (319)
                      |+.+|       +-+||||||+.++..++.+.         .+--+..|..+...+-++=+++...
T Consensus       176 LEl~P-------~Y~KAl~RRA~A~E~lg~~~eal~D~tv~ci~~~F~n~s~~~~~eR~Lkk~a~~  234 (606)
T KOG0547|consen  176 LELNP-------DYVKALLRRASAHEQLGKFDEALFDVTVLCILEGFQNASIEPMAERVLKKQAMK  234 (606)
T ss_pred             hhcCc-------HHHHHHHHHHHHHHhhccHHHHHHhhhHHHHhhhcccchhHHHHHHHHHHHHHH
Confidence            99999       99999999999888887774         3334555666665555554444433

>KOG0548|consensus

Probab=98.15  E-value=3.3e-06  Score=83.51  Aligned_cols=111  Identities=14%  Similarity=0.159  Sum_probs=88.5

Q ss_pred             hhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCC
Q psy5048         157 WDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQ  236 (319)
Q Consensus       157 ~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~  236 (319)
                      .+...+++||.+|..++|..+...... .  ...+|.+   ..+|++--.|+.++..+..+++-|..+++.+|       
T Consensus       357 ~A~e~r~kGne~Fk~gdy~~Av~~Yte-A--Ikr~P~D---a~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p-------  423 (539)
T KOG0548|consen  357 KAEEEREKGNEAFKKGDYPEAVKHYTE-A--IKRDPED---ARLYSNRAACYLKLGEYPEALKDAKKCIELDP-------  423 (539)
T ss_pred             HHHHHHHHHHHHHhccCHHHHHHHHHH-H--HhcCCch---hHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCc-------
Confidence            377788899999999999766643322 1  1222333   34776666688889999999999999999999       


Q ss_pred             CChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhH
Q psy5048         237 STIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRG  280 (319)
Q Consensus       237 ~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~  280 (319)
                      +++||++|.|.++..+.+|+        ++++||+++++..-+++|-+.+..
T Consensus       424 ~~~kgy~RKg~al~~mk~ydkAleay~eale~dp~~~e~~~~~~rc~~a~~~  475 (539)
T KOG0548|consen  424 NFIKAYLRKGAALRAMKEYDKALEAYQEALELDPSNAEAIDGYRRCVEAQRG  475 (539)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhc
Confidence            99999999999777777775        999999999999999999987633

>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)

Probab=98.11  E-value=8.4e-06  Score=84.09  Aligned_cols=126  Identities=12%  Similarity=0.061  Sum_probs=94.9

Q ss_pred             CCCCCeEEEEEEEeeeeeccchhhccCccccchhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHh
Q psy5048         124 IPGGLSAVRQSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAH  203 (319)
Q Consensus       124 Ip~~~~l~feVeL~~v~~~~~~~~~m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~  203 (319)
                      +|++.++.+.+++..+...  ..|.|+++++...+..+++.||.++..++|..+...- .+..  ...|.    ...+.+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~k~~G~~~~~~~~~~~Ai~~y-~~al--~~~p~----~~~~~n  165 (615)
T TIGR00990        95 APKNAPVEPADELPEIDES--SVANLSEEERKKYAAKLKEKGNKAYRNKDFNKAIKLY-SKAI--ECKPD----PVYYSN  165 (615)
T ss_pred             CCCCCCCCccccccccchh--hcccCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH-HHHH--hcCCc----hHHHHH
Confidence            6777777888777776643  3599999999999999999999999999997655322 2221  22222    124444


Q ss_pred             hHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChh
Q psy5048         204 CSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQS  265 (319)
Q Consensus       204 ~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~  265 (319)
                      ...|+..+..+..|+..|..+|+.+|       +|+|||||||..+..+++++        ++.+++.+.
T Consensus       166 ~a~~~~~l~~~~~Ai~~~~~al~l~p-------~~~~a~~~~a~a~~~lg~~~eA~~~~~~~~~~~~~~~  228 (615)
T TIGR00990       166 RAACHNALGDWEKVVEDTTAALELDP-------DYSKALNRRANAYDGLGKYADALLDLTASCIIDGFRN  228 (615)
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHHcCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcc
Confidence            55577888999999999999999999       99999999999888888876        445666543

>KOG4648|consensus

Probab=97.80  E-value=1.6e-05  Score=75.44  Aligned_cols=112  Identities=11%  Similarity=0.058  Sum_probs=75.2

Q ss_pred             cccchhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhcccccc
Q psy5048         152 NKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLT  231 (319)
Q Consensus       152 eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~  231 (319)
                      ++-+..+..++++||.||++++|..++-+.  ..-+. ..|+..   .+..+--.||.+++.+-.|-..|+..+..+.  
T Consensus        91 ~~LL~~~SEiKE~GN~yFKQgKy~EAIDCY--s~~ia-~~P~Np---V~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~--  162 (536)
T KOG4648|consen   91 QQLLKKASEIKERGNTYFKQGKYEEAIDCY--STAIA-VYPHNP---VYHINRALAYLKQKSFAQAEEDCEAAIALDK--  162 (536)
T ss_pred             HHHHHhhHHHHHhhhhhhhccchhHHHHHh--hhhhc-cCCCCc---cchhhHHHHHHHHHHHHHHHHhHHHHHHhhH--
Confidence            344556677999999999999997654322  11111 111110   1222222367888889999999999999888  


Q ss_pred             ccCCCCChhHHHHHHHHHHhc-------Cccc-cccCCCChhhHHHHHHHHHH
Q psy5048         232 FARNQSTIPAWTHDYTRLALL-------LPFL-QYEFPPEQSQCLPLLGIRAQ  276 (319)
Q Consensus       232 ~~~~~~NvKALfRrg~~~~~~-------~~~~-a~~~dP~n~~i~~el~~l~~  276 (319)
                           .-+||+-|||++...+       .|++ +|+++|.+-+.+..+..++.
T Consensus       163 -----~Y~KAYSRR~~AR~~Lg~~~EAKkD~E~vL~LEP~~~ELkK~~a~i~S  210 (536)
T KOG4648|consen  163 -----LYVKAYSRRMQARESLGNNMEAKKDCETVLALEPKNIELKKSLARINS  210 (536)
T ss_pred             -----HHHHHHHHHHHHHHHHhhHHHHHHhHHHHHhhCcccHHHHHHHHHhcc
Confidence                 8999999999944333       2233 99999997776666666654

>KOG0551|consensus

Probab=97.70  E-value=0.00012  Score=69.18  Aligned_cols=115  Identities=10%  Similarity=0.030  Sum_probs=77.7

Q ss_pred             hhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCC
Q psy5048         156 HWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARN  235 (319)
Q Consensus       156 ~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~  235 (319)
                      +.|...|++||.+|+-..|..+. ..+.+-.... .++......||.+-..|...++++..++.-|+.+|..+|      
T Consensus        79 E~Aen~KeeGN~~fK~Kryk~A~-~~Yt~Glk~k-c~D~dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P------  150 (390)
T KOG0551|consen   79 EQAENYKEEGNEYFKEKRYKDAV-ESYTEGLKKK-CADPDLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKP------  150 (390)
T ss_pred             HHHHHHHHHhHHHHHhhhHHHHH-HHHHHHHhhc-CCCccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCc------
Confidence            48999999999999999886543 2222221111 123344555664444455677999999999999999999      


Q ss_pred             CCChhHHHHHHHHHHhcCcc---------------c-------cccCCCChhhHHHHHHHHHHHHh
Q psy5048         236 QSTIPAWTHDYTRLALLLPF---------------L-------QYEFPPEQSQCLPLLGIRAQHQR  279 (319)
Q Consensus       236 ~~NvKALfRrg~~~~~~~~~---------------~-------a~~~dP~n~~i~~el~~l~~~~k  279 (319)
                       +|+||+||-|+.+..+.-|               +       .--++|+++.+..+.+.+.++-.
T Consensus       151 -~h~Ka~~R~Akc~~eLe~~~~a~nw~ee~~~~d~e~K~~~~l~~l~~k~~~~~L~~er~~rK~~~  215 (390)
T KOG0551|consen  151 -THLKAYIRGAKCLLELERFAEAVNWCEEGLQIDDEAKKAIELRNLIHKNDKLKLIEERDVRKKNA  215 (390)
T ss_pred             -chhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhH
Confidence             9999999999944332221               1       22268888888777776655433

>KOG0550|consensus

Probab=97.44  E-value=0.00025  Score=68.73  Aligned_cols=116  Identities=12%  Similarity=0.012  Sum_probs=81.0

Q ss_pred             hhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCc-chhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCC
Q psy5048         157 WDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKP-HRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARN  235 (319)
Q Consensus       157 ~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~-~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~  235 (319)
                      .....++.||..|+.+.|..+.- .+-....  ..| +.+....|+.+...+...+.+...+|..|+.++.+|+      
T Consensus       248 ~le~~k~~gN~~fk~G~y~~A~E-~Yteal~--idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~------  318 (486)
T KOG0550|consen  248 KLEVKKERGNDAFKNGNYRKAYE-CYTEALN--IDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDS------  318 (486)
T ss_pred             HHHHHHhhhhhHhhccchhHHHH-HHHHhhc--CCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCH------
Confidence            45667889999999998854432 2222211  112 2344555664444455777999999999999999999      


Q ss_pred             CCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHH
Q psy5048         236 QSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMI  283 (319)
Q Consensus       236 ~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~  283 (319)
                       .=+|||-|||+.+.++.+|+        |.+.+-+ ..++..|++.+.-++....
T Consensus       319 -syikall~ra~c~l~le~~e~AV~d~~~a~q~~~s-~e~r~~l~~A~~aLkkSkR  372 (486)
T KOG0550|consen  319 -SYIKALLRRANCHLALEKWEEAVEDYEKAMQLEKD-CEIRRTLREAQLALKKSKR  372 (486)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchHHHHHHHHHHHHHhhh
Confidence             99999999999776666775        6676666 7788888877766554433

>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional

Probab=97.38  E-value=0.0004  Score=67.22  Aligned_cols=111  Identities=16%  Similarity=0.093  Sum_probs=80.4

Q ss_pred             hhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCCC
Q psy5048         159 RRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQST  238 (319)
Q Consensus       159 ~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~N  238 (319)
                      ..+..+|+..+..++|..+...- .+..  ...|...   ..+.....++..+..+..|+..|..++..+|       +|
T Consensus         3 ~~l~~~a~~a~~~~~~~~Ai~~~-~~Al--~~~P~~~---~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P-------~~   69 (356)
T PLN03088          3 KDLEDKAKEAFVDDDFALAVDLY-TQAI--DLDPNNA---ELYADRAQANIKLGNFTEAVADANKAIELDP-------SL   69 (356)
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHH-HHHH--HhCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-------CC
Confidence            34566777777777776443211 1111  1111221   2333334456777999999999999999999       99


Q ss_pred             hhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhH
Q psy5048         239 IPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHM  282 (319)
Q Consensus       239 vKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~  282 (319)
                      ..|+||+|..+..+++|.        +++++|.+..+...+.+|..++++..
T Consensus        70 ~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~~~~kl~~~~  121 (356)
T PLN03088         70 AKAYLRKGTACMKLEEYQTAKAALEKGASLAPGDSRFTKLIKECDEKIAEEE  121 (356)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhh
Confidence            999999999887788876        89999999999999999999987653

>KOG0376|consensus

Probab=97.27  E-value=0.00025  Score=69.81  Aligned_cols=115  Identities=10%  Similarity=-0.023  Sum_probs=80.1

Q ss_pred             hhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCC
Q psy5048         157 WDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQ  236 (319)
Q Consensus       157 ~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~  236 (319)
                      .+...+.++|.+++.+++..++ ..+.|....  .|..+......   ..|..+...+-.|+.-|.+.++.+|       
T Consensus         3 ~a~e~k~ean~~l~~~~fd~av-dlysKaI~l--dpnca~~~anR---a~a~lK~e~~~~Al~Da~kaie~dP-------   69 (476)
T KOG0376|consen    3 SAEELKNEANEALKDKVFDVAV-DLYSKAIEL--DPNCAIYFANR---ALAHLKVESFGGALHDALKAIELDP-------   69 (476)
T ss_pred             hhhhhhhHHhhhcccchHHHHH-HHHHHHHhc--CCcceeeechh---hhhheeechhhhHHHHHHhhhhcCc-------
Confidence            4567788899998888885433 111111111  00001100000   0133556778889999999999999       


Q ss_pred             CChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHH
Q psy5048         237 STIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMIT  284 (319)
Q Consensus       237 ~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~k  284 (319)
                      ..+||+||||++++.+..|.        ...+.|+++++++-+..|..+++++.-+
T Consensus        70 ~~~K~Y~rrg~a~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe  125 (476)
T KOG0376|consen   70 TYIKAYVRRGTAVMALGEFKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFE  125 (476)
T ss_pred             hhhheeeeccHHHHhHHHHHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999888776664        7789999999999999999999886544

>KOG0549|consensus

Probab=97.17  E-value=0.00037  Score=60.51  Aligned_cols=56  Identities=48%  Similarity=0.680  Sum_probs=45.6

Q ss_pred             EeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048          81 FTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus        81 f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      |++|.+++|+|.++++.+|+.||++.+++||+++||..+...    -..++|.+.++.+-
T Consensus         1 ~~~g~~~vi~gm~~~~~g~c~ge~rkvv~pp~l~fg~~~~~~----~~~~~~~~~l~~~~   56 (188)
T KOG0549|consen    1 FTLGQGFVIPGMDQALEGMCNGEKRKVVIPPHLGFGEGGRGD----LNILVITILLVLLF   56 (188)
T ss_pred             CcccceEEecCHHHHhhhhhccccceeccCCccccccccccc----ccceEEEeeeeehh
Confidence            467899999999999999999999999999999999555332    13467777776654

>KOG0548|consensus

Probab=96.24  E-value=0.0088  Score=59.75  Aligned_cols=105  Identities=17%  Similarity=0.075  Sum_probs=83.1

Q ss_pred             hhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCC
Q psy5048         158 DRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQS  237 (319)
Q Consensus       158 a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~  237 (319)
                      +...+++||..+..+++..+...- ....+.+.  .   -..|+++-+.|+..+..+..++.-.++..+..|       +
T Consensus         2 a~e~k~kgnaa~s~~d~~~ai~~~-t~ai~l~p--~---nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p-------~   68 (539)
T KOG0548|consen    2 AVELKEKGNAAFSSGDFETAIRLF-TEAIMLSP--T---NHVLYSNRSAAYASLGSYEKALKDATKTRRLNP-------D   68 (539)
T ss_pred             hhHHHHHHHhhcccccHHHHHHHH-HHHHccCC--C---ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCC-------c
Confidence            456789999999999997665422 11222222  1   234777777788999999999999999999888       9


Q ss_pred             ChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHH
Q psy5048         238 TIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRA  275 (319)
Q Consensus       238 NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~  275 (319)
                      =.|||+|.|-++..+++|+        .|+.||+|+....-|....
T Consensus        69 w~kgy~r~Gaa~~~lg~~~eA~~ay~~GL~~d~~n~~L~~gl~~a~  114 (539)
T KOG0548|consen   69 WAKGYSRKGAALFGLGDYEEAILAYSEGLEKDPSNKQLKTGLAQAY  114 (539)
T ss_pred             hhhHHHHhHHHHHhcccHHHHHHHHHHHhhcCCchHHHHHhHHHhh
Confidence            9999999999998899997        8999999998888777665

>KOG0624|consensus

Probab=95.73  E-value=0.0092  Score=57.06  Aligned_cols=58  Identities=7%  Similarity=-0.014  Sum_probs=47.6

Q ss_pred             chhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHh
Q psy5048         215 TPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQR  279 (319)
Q Consensus       215 ~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k  279 (319)
                      -.||.+|+.||+.+|       +||-+|--||-++....+|+        |++.+|+|..++.-|.+-++..+
T Consensus       324 ~eAiqqC~evL~~d~-------~dv~~l~dRAeA~l~dE~YD~AI~dye~A~e~n~sn~~~reGle~Akrlkk  389 (504)
T KOG0624|consen  324 GEAIQQCKEVLDIDP-------DDVQVLCDRAEAYLGDEMYDDAIHDYEKALELNESNTRAREGLERAKRLKK  389 (504)
T ss_pred             HHHHHHHHHHHhcCc-------hHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHH
Confidence            348999999999999       99999999999776544454        99999999999988776554433

>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A

Probab=95.26  E-value=0.01  Score=42.64  Aligned_cols=49  Identities=10%  Similarity=-0.062  Sum_probs=40.3

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcC-ccc--------cccCCC
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLL-PFL--------QYEFPP  262 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~-~~~--------a~~~dP  262 (319)
                      ++....++..|+..++++++.+|       +|+.++|+||..+..++ .+.        |+++||
T Consensus        12 ~~~~~~~~~~A~~~~~~ai~~~p-------~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P   69 (69)
T PF13414_consen   12 IYFQQGDYEEAIEYFEKAIELDP-------NNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP   69 (69)
T ss_dssp             HHHHTTHHHHHHHHHHHHHHHST-------THHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred             HHHHcCCHHHHHHHHHHHHHcCC-------CCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence            34567889999999999999999       99999999999777776 454        666665

...

>PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A

Probab=94.85  E-value=0.053  Score=38.61  Aligned_cols=57  Identities=9%  Similarity=-0.138  Sum_probs=48.5

Q ss_pred             hcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHH
Q psy5048         211 LVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIR  274 (319)
Q Consensus       211 ~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l  274 (319)
                      ..++..|+..+..++..+|       +|..+++..|..+...+.++        ++..+|+++.+...+.+|
T Consensus         4 ~~~~~~A~~~~~~~l~~~p-------~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~l~a~i   68 (68)
T PF14559_consen    4 QGDYDEAIELLEKALQRNP-------DNPEARLLLAQCYLKQGQYDEAEELLERLLKQDPDNPEYQQLLAQI   68 (68)
T ss_dssp             TTHHHHHHHHHHHHHHHTT-------TSHHHHHHHHHHHHHTT-HHHHHHHHHCCHGGGTTHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCHHHHHHHHhcC
Confidence            4678889999999999999       99999999999777778886        888999998888877654

...

>KOG0544|consensus

Probab=94.26  E-value=0.023  Score=44.32  Aligned_cols=20  Identities=25%  Similarity=0.277  Sum_probs=17.6

Q ss_pred             CCCCCCCCCCeeecccceEE
Q psy5048          18 KTPCIRPRSTLSLSPYSLSL   37 (319)
Q Consensus        18 ~~p~Ipp~atl~~d~~lv~~   37 (319)
                      -++.|||||||.||+|++++
T Consensus        88 ~p~~IppNatL~FdVEll~v  107 (108)
T KOG0544|consen   88 HPGGIPPNATLVFDVELLKV  107 (108)
T ss_pred             CCCccCCCcEEEEEEEEEec
Confidence            36889999999999999864

>PF13371 TPR_9: Tetratricopeptide repeat

Probab=93.83  E-value=0.092  Score=37.88  Aligned_cols=60  Identities=12%  Similarity=0.071  Sum_probs=50.4

Q ss_pred             HHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHH
Q psy5048         208 YALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIR  274 (319)
Q Consensus       208 ~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l  274 (319)
                      +.....|..+++.+..++..+|       +++-+++-+|..+..++.|.        +++..|++.++......|
T Consensus         5 ~~~~~~~~~A~~~~~~~l~~~p-------~~~~~~~~~a~~~~~~g~~~~A~~~l~~~l~~~p~~~~~~~~~a~l   72 (73)
T PF13371_consen    5 YLQQEDYEEALEVLERALELDP-------DDPELWLQRARCLFQLGRYEEALEDLERALELSPDDPDARALRAML   72 (73)
T ss_pred             HHhCCCHHHHHHHHHHHHHhCc-------ccchhhHHHHHHHHHhccHHHHHHHHHHHHHHCCCcHHHHHHHHhc
Confidence            4556788899999999999999       99999999999777777775        899999988887765544

>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B

Probab=93.81  E-value=0.049  Score=38.57  Aligned_cols=50  Identities=12%  Similarity=-0.038  Sum_probs=40.8

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChh
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQS  265 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~  265 (319)
                      ....++..|+..+..++..+|       +|..|+|..|..+...+.+.        +++++|+|+
T Consensus         8 ~~~g~~~~A~~~~~~~l~~~P-------~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~p   65 (65)
T PF13432_consen    8 YQQGDYDEAIAAFEQALKQDP-------DNPEAWYLLGRILYQQGRYDEALAYYERALELDPDNP   65 (65)
T ss_dssp             HHCTHHHHHHHHHHHHHCCST-------THHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-H
T ss_pred             HHcCCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence            455788899999999999999       99999999999777777775        777888764

>KOG4642|consensus

Probab=92.63  E-value=0.54  Score=43.14  Aligned_cols=110  Identities=8%  Similarity=-0.065  Sum_probs=74.2

Q ss_pred             chhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccC
Q psy5048         155 LHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFAR  234 (319)
Q Consensus       155 ~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~  234 (319)
                      ...+.+++++||.+|...+|-.++- .+.+....+.-     -...+.+-..|..++.+|.++...|...++.+|     
T Consensus         7 s~~a~qlkE~gnk~f~~k~y~~ai~-~y~raI~~nP~-----~~~Y~tnralchlk~~~~~~v~~dcrralql~~-----   75 (284)
T KOG4642|consen    7 SESAEQLKEQGNKCFIPKRYDDAID-CYSRAICINPT-----VASYYTNRALCHLKLKHWEPVEEDCRRALQLDP-----   75 (284)
T ss_pred             chHHHHHHhccccccchhhhchHHH-HHHHHHhcCCC-----cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcCh-----
Confidence            4678999999999999998865543 22222211110     001122222255668999999999999999999     


Q ss_pred             CCCChhHHHHHHHHHHhcCccc--------c---ccCCCC--hhhHHHHHHHHHHH
Q psy5048         235 NQSTIPAWTHDYTRLALLLPFL--------Q---YEFPPE--QSQCLPLLGIRAQH  277 (319)
Q Consensus       235 ~~~NvKALfRrg~~~~~~~~~~--------a---~~~dP~--n~~i~~el~~l~~~  277 (319)
                        +-|||+|=-|+.......|.        |   ++-.|.  --+|-.+|+..+.+
T Consensus        76 --N~vk~h~flg~~~l~s~~~~eaI~~Lqra~sl~r~~~~~~~~di~~~L~~ak~~  129 (284)
T KOG4642|consen   76 --NLVKAHYFLGQWLLQSKGYDEAIKVLQRAYSLLREQPFTFGDDIPKALRDAKKK  129 (284)
T ss_pred             --HHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHhC
Confidence              99999999999777766665        2   222222  35788888877655

>TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD

Probab=91.11  E-value=0.76  Score=36.97  Aligned_cols=65  Identities=14%  Similarity=-0.007  Sum_probs=52.8

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++....++..++..+..++..+|       .|...+|.+|..+...+++.        +++++|++..+....+++.+..
T Consensus        60 ~~~~~~~~~~A~~~~~~~~~~~p-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~  132 (135)
T TIGR02552        60 CCQMLKEYEEAIDAYALAAALDP-------DDPRPYFHAAECLLALGEPESALKALDLAIEICGENPEYSELKERAEAML  132 (135)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCC-------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Confidence            44556778888888889988888       99999999999776677775        8999999988888877776654

ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array.

>PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ]

Probab=90.88  E-value=0.14  Score=31.37  Aligned_cols=26  Identities=15%  Similarity=0.123  Sum_probs=20.8

Q ss_pred             hhHHHHHHHHHHhcCccc--------cccCCCCh
Q psy5048         239 IPAWTHDYTRLALLLPFL--------QYEFPPEQ  264 (319)
Q Consensus       239 vKALfRrg~~~~~~~~~~--------a~~~dP~n  264 (319)
                      ++++|++|..+..+++++        |+++||+|
T Consensus         1 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~   34 (34)
T PF00515_consen    1 AEAYYNLGNAYFQLGDYEEALEYYQRALELDPDN   34 (34)
T ss_dssp             HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTH
T ss_pred             CHHHHHHHHHHHHhCCchHHHHHHHHHHHHCcCC
Confidence            478999999777778876        88899975

It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. The X-ray structure of a domain containing three TPRs from protein phosphatase 5 revealed that TPR adopts a helix-turn-helix arrangement, with adjacent TPR motifs packing in a parallel fashion, resulting in a spiral of repeating anti-parallel alpha-helices []. The two helices are denoted helix A and helix B. The packing angle between helix A and helix B is ~24 degrees; within a single TPR and generates a right-handed superhelical shape. Helix A interacts with helix B and with helix A' of the next TPR. Two protein surfaces are generated: the inner concave surface is contributed to mainly by residue on helices A, and the other surface presents residues from both helices A and B. ; GO: 0005515 protein binding; PDB: 3SF4_C 2LNI_A 1ELW_A 2C0M_A 1FCH_B 3R9A_B 2J9Q_A 2C0L_A 1KT1_A 3FWV_A ....

>PRK15359 type III secretion system chaperone protein SscB; Provisional

Probab=90.72  E-value=0.94  Score=37.77  Aligned_cols=59  Identities=8%  Similarity=-0.092  Sum_probs=47.3

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLG  272 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~  272 (319)
                      +...+.++..|+..+..++..+|       ++.-++|++|..+..++++.        |++++|.+.....-+.
T Consensus        67 ~~~~~g~~~~A~~~y~~Al~l~p-------~~~~a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~~~~~~~~  133 (144)
T PRK15359         67 TWMMLKEYTTAINFYGHALMLDA-------SHPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQ  133 (144)
T ss_pred             HHHHHhhHHHHHHHHHHHHhcCC-------CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence            45677888999999999999888       99999999999777677765        8889999876664333

>PRK15359 type III secretion system chaperone protein SscB; Provisional

Probab=89.42  E-value=0.68  Score=38.62  Aligned_cols=69  Identities=7%  Similarity=-0.106  Sum_probs=56.4

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      +......+..++..|..++..+|       .|.-+++.+|..+...+.+.        |++++|.+.++..-+..+-.+.
T Consensus        33 ~~~~~g~~~~A~~~~~~al~~~P-------~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l~~~  105 (144)
T PRK15359         33 ASWQEGDYSRAVIDFSWLVMAQP-------WSWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCLKMM  105 (144)
T ss_pred             HHHHcCCHHHHHHHHHHHHHcCC-------CcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHc
Confidence            33566888899999999999999       99999999999777777775        9999999998888887766554


Q ss_pred             hHhH
Q psy5048         279 RGHM  282 (319)
Q Consensus       279 k~~~  282 (319)
                      .+..
T Consensus       106 g~~~  109 (144)
T PRK15359        106 GEPG  109 (144)
T ss_pred             CCHH
Confidence            4433

>PF13431 TPR_17: Tetratricopeptide repeat

Probab=89.19  E-value=0.39  Score=30.06  Aligned_cols=29  Identities=3%  Similarity=-0.236  Sum_probs=23.4

Q ss_pred             HhhhhccccccccCCCCChhHHHHHHHHHHhcCccc
Q psy5048         221 CFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL  256 (319)
Q Consensus       221 c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~  256 (319)
                      |++.++.+|       +|+.|+|..|..+...++++
T Consensus         2 y~kAie~~P-------~n~~a~~nla~~~~~~g~~~   30 (34)
T PF13431_consen    2 YKKAIELNP-------NNAEAYNNLANLYLNQGDYE   30 (34)
T ss_pred             hHHHHHHCC-------CCHHHHHHHHHHHHHCcCHH
Confidence            567778888       99999999999776666654

>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional

Probab=86.72  E-value=1.6  Score=42.14  Aligned_cols=63  Identities=8%  Similarity=-0.059  Sum_probs=51.7

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      .....+..|+..+..+++.+|       +|..+++.||..+..++.+.        |++++|.+..+...+..+-...
T Consensus        13 ~~~~~~~~Ai~~~~~Al~~~P-------~~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~~l   83 (356)
T PLN03088         13 FVDDDFALAVDLYTQAIDLDP-------NNAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACMKL   83 (356)
T ss_pred             HHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHh
Confidence            345788899999999999999       99999999999887777775        9999999887776665554443

>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5

Probab=85.50  E-value=0.56  Score=35.85  Aligned_cols=26  Identities=38%  Similarity=0.492  Sum_probs=20.7

Q ss_pred             cccCCCCCCCCCCCCCCCCCCeeecccce
Q psy5048           7 LPFGENRNPFYKTPCIRPRSTLSLSPYSL   35 (319)
Q Consensus         7 ~~~g~~g~~~~~~p~Ipp~atl~~d~~lv   35 (319)
                      ++||..|..   .+.|||+++|.|+++++
T Consensus        69 ~ayg~~~~~---~~~ip~~~~l~f~Iell   94 (94)
T PF00254_consen   69 LAYGEKGLE---PPKIPPNSTLVFEIELL   94 (94)
T ss_dssp             GTTTTTTBC---TTTBTTTSEEEEEEEEE
T ss_pred             hhcCccccC---CCCcCCCCeEEEEEEEC
Confidence            678888753   14599999999999875

2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....

>KOG1308|consensus

Probab=84.72  E-value=0.44  Score=45.69  Aligned_cols=132  Identities=13%  Similarity=0.037  Sum_probs=82.5

Q ss_pred             CccccchhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhcccc
Q psy5048         150 IPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSM  229 (319)
Q Consensus       150 ~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~  229 (319)
                      ..+|.++.+.+.+.+....+..+++..++. ..-..  ...   ---+..++.+--++..++.+++.+|+.|...++.++
T Consensus       106 ~Tee~~eqa~e~k~~A~eAln~G~~~~ai~-~~t~a--i~l---np~~a~l~~kr~sv~lkl~kp~~airD~d~A~ein~  179 (377)
T KOG1308|consen  106 ITEEMMDQANDKKVQASEALNDGEFDTAIE-LFTSA--IEL---NPPLAILYAKRASVFLKLKKPNAAIRDCDFAIEINP  179 (377)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCcchhhhhc-ccccc--ccc---CCchhhhcccccceeeeccCCchhhhhhhhhhccCc
Confidence            345666666666665555555554422211 00000  001   011223443334455788999999999999999888


Q ss_pred             ccccCCCCChhHHHHHHHHHHhcCccc--------c--ccCCCChhhHHHHHHHHHHHHhHhHHHH-HHHHHhccc
Q psy5048         230 LTFARNQSTIPAWTHDYTRLALLLPFL--------Q--YEFPPEQSQCLPLLGIRAQHQRGHMITQ-GSLYFFLFY  294 (319)
Q Consensus       230 l~~~~~~~NvKALfRrg~~~~~~~~~~--------a--~~~dP~n~~i~~el~~l~~~~k~~~~ke-k~~y~~mF~  294 (319)
                             +..|.+==||.+..+++.|+        |  +.+|+.+.++..|..--..++++++.+. +.+=..||.
T Consensus       180 -------Dsa~~ykfrg~A~rllg~~e~aa~dl~~a~kld~dE~~~a~lKeV~p~a~ki~e~~~k~er~~~e~~~~  248 (377)
T KOG1308|consen  180 -------DSAKGYKFRGYAERLLGNWEEAAHDLALACKLDYDEANSATLKEVFPNAGKIEEHRRKYERAREEREIK  248 (377)
T ss_pred             -------ccccccchhhHHHHHhhchHHHHHHHHHHHhccccHHHHHHHHHhccchhhhhhchhHHHHHHHHhccc
Confidence                   99999988888777777775        3  4466778888888777777777776553 444445553

>PF14853 Fis1_TPR_C: Fis1 C-terminal tetratricopeptide repeat; PDB: 1IYG_A 1PC2_A 1NZN_A 3UUX_C 1Y8M_A 2PQR_A 2PQN_A 3O48_A

Probab=81.13  E-value=2.5  Score=29.43  Aligned_cols=23  Identities=17%  Similarity=0.261  Sum_probs=19.3

Q ss_pred             cccCCCChhhHHHHHHHHHHHHh
Q psy5048         257 QYEFPPEQSQCLPLLGIRAQHQR  279 (319)
Q Consensus       257 a~~~dP~n~~i~~el~~l~~~~k  279 (319)
                      +|+++|+|+.+......++.+++
T Consensus        27 lL~~eP~N~Qa~~L~~~i~~~i~   49 (53)
T PF14853_consen   27 LLEIEPDNRQAQSLKELIEDKIQ   49 (53)
T ss_dssp             HHHHTTS-HHHHHHHHHHHHHHH
T ss_pred             HHhhCCCcHHHHHHHHHHHHHHh
Confidence            89999999999998888887765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	319
2pbc_A	102	Fk506-Binding Protein 2 Length = 102		6e-18
3vaw_A	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		1e-14
3uqb_A	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		1e-14
4ggq_C	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		1e-14
4dip_A	125	Crystal Structure Of Human Peptidyl-Prolyl Cis-Tran		2e-14
3uqa_A	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		2e-14
4dz3_A	113	Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Is		2e-14
2ke0_A	117	Solution Structure Of Peptidyl-Prolyl Cis-Trans Iso		2e-14
2y78_A	133	Crystal Structure Of Bpss1823, A Mip-Like Chaperone		2e-14
3uf8_A	209	Crystal Structure Of A Smt Fusion Peptidyl-Prolyl C		7e-14
2lgo_A	130	Solution Nmr Structure Of A Fkbp-Type Peptidyl-Prol		4e-12
1u79_A	129	Crystal Structure Of Atfkbp13 Length = 129		1e-11
3jxv_A	356	Crystal Structure Of The 3 Fkbp Domains Of Wheat Fk		2e-11
3jym_A	377	Crystal Structure Of The 3 Fkbp Domains Of Wheat Fk		2e-11
1yat_A	113	Improved Calcineurin Inhibition By Yeast Fkbp12-Dru		1e-10
3uqi_A	108	Crystallographic Structure Of Fkbp12 From Aedes Aeg		1e-10
1fkk_A	107	Atomic Structure Of Fkbp12, An Immunophilin Binding		7e-10
1fkb_A	107	Atomic Structure Of The Rapamycin Human Immunophili		7e-10
3h9r_B	109	Crystal Structure Of The Kinase Domain Of Type I Ac		8e-10
1eym_A	107	Fk506 Binding Protein Mutant, Homodimeric Complex L		9e-10
1tco_C	107	Ternary Complex Of A Calcineurin A Fragment, Calcin		9e-10
2fap_A	107	The Structure Of The Immunophilin-Immunosuppressant		9e-10
1bl4_A	107	Fkbp Mutant F36v Complexed With Remodeled Synthetic		9e-10
1bkf_A	107	Fk506 Binding Protein Fkbp Mutant R42kH87V COMPLEX		1e-09
2ppp_A	107	Crystal Structure Of E60q Mutant Of Fkbp12 Length =		2e-09
2ppo_A	107	Crystal Structure Of E60a Mutant Of Fkbp12 Length =		2e-09
4dz2_A	113	Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Is		6e-09
2dg4_A	107	Fk506-Binding Protein Mutant Wf59 Complexed With Ra		1e-08
2dg9_A	107	Fk506-Binding Protein Mutant Wl59 Complexed With Ra		2e-08
1r9h_A	135	Structural Genomics Of C.Elegans: Fkbp-Type Peptidy		5e-08
1kt0_A	457	Structure Of The Large Fkbp-like Protein, Fkbp51, I		6e-08
3o5e_A	144	Fk1 Domain Of Fkbp51, Crystal Form Vi Length = 144		8e-08
3o5g_A	128	Fk1 Domain Of Fkbp51, Crystal Form I Length = 128		9e-08
3o5l_A	128	Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form I Le		9e-08
4drh_A	144	Co-crystal Structure Of The Ppiase Domain Of Fkbp51		1e-07
1c9h_A	107	Crystal Structure Of Fkbp12.6 In Complex With Rapam		1e-07
1pbk_A	116	Homologous Domain Of Human Fkbp25 Length = 116		1e-07
1kt1_A	457	Structure Of The Large Fkbp-Like Protein, Fkbp51, I		1e-07
3kz7_A	119	C-Terminal Domain Of Murine Fkbp25 Rapamycin Comple		1e-07
3o5d_A	264	Crystal Structure Of A Fragment Of Fkbp51 Comprisin		1e-07
2vn1_A	129	Crystal Structure Of The Fk506-Binding Domain Of Pl		1e-06
2ofn_A	135	Solution Structure Of Fk506-Binding Domain (Fkbd)of		1e-06
2ki3_A	126	Structural And Biochemical Characterization Of Fk50		2e-06
1rot_A	149	Structure Of Fkbp59-I, The N-Terminal Domain Of A 5		8e-06
1q1c_A	280	Crystal Structure Of N(1-260) Of Human Fkbp52 Lengt		9e-06
1n1a_A	140	Crystal Structure Of The N-Terminal Domain Of Human		9e-06
4drj_A	144	O-crystal Structure Of The Ppiase Domain Of Fkbp52,		1e-05
1ix5_A	151	Solution Structure Of The Methanococcus Thermolitho		8e-05
3prb_A	231	Structural Analysis Of Protein Folding By The Metha		1e-04
3pr9_A	157	Structural Analysis Of Protein Folding By The Metha		2e-04
1jvw_A	167	Trypanosoma Cruzi Macrophage Infectivity Potentiato		7e-04

>pdb|2PBC|A Chain A, Fk506-Binding Protein 2 Length = 102

Iteration: 1
 Score = 88.2 bits (217), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/71 (57%), Positives = 50/71 (70%)
Query: 75  RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQS 134
           ++QPF F+LG GQVIKGWDQGL  MC GEKRKL IP  L YG+RGA   IPGG + V + 
Sbjct: 32  QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEV 91
Query: 135 EHSELEISTKF 145
           E  ++E  T+ 
Sbjct: 92  ELLKIERRTEL 102

>pdb|3VAW|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation V3i From Burkholderia Pseudomallei Complexed With Fk506 Length = 209

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR+ PF F LG G VIKGWD+G+  M VG  R+LTIPP L YG RGAG VIP
Sbjct: 144 DRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIP 195

>pdb|3UQB|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation D44g From Burkholderia Pseudomallei Complexed With Fk506 Length = 209

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR+ PF F LG G VIKGWD+G+  M VG  R+LTIPP L YG RGAG VIP
Sbjct: 144 DRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIP 195

>pdb|4GGQ|C Chain C, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase From Burkholderia Pseudomallei Complexed With Cj40 Length = 209

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR+ PF F LG G VIKGWD+G+  M VG  R+LTIPP L YG RGAG VIP
Sbjct: 144 DRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIP 195

>pdb|4DIP|A Chain A, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans Isomerase Fkbp14 Length = 125

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 38/53 (71%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           H+  QP  FTLG+ + +KGWDQGL  MCVGEKRKL IPPAL YG  G G + P
Sbjct: 56  HNNGQPIWFTLGILEALKGWDQGLKGMCVGEKRKLIIPPALGYGKEGKGKIPP 108

>pdb|3UQA|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation A54e From Burkholderia Pseudomallei Complexed With Fk506 Length = 209

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR+ PF F LG G VIKGWD+G+  M VG  R+LTIPP L YG RGAG VIP
Sbjct: 144 DRNDPFEFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIP 195

>pdb|4DZ3|A Chain A, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation M61h From Burkholderia Pseudomallei Complexed With Fk506 Length = 113

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR+ PF F LG G VIKGWD+G+  M VG  R+LTIPP L YG RGAG VIP
Sbjct: 48  DRNDPFAFVLGGGHVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIP 99

>pdb|2KE0|A Chain A, Solution Structure Of Peptidyl-Prolyl Cis-Trans Isomerase From Burkholderia Pseudomallei Length = 117

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR+ PF F LG G VIKGWD+G+  M VG  R+LTIPP L YG RGAG VIP
Sbjct: 52  DRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIP 103

>pdb|2Y78|A Chain A, Crystal Structure Of Bpss1823, A Mip-Like Chaperone From Burkholderia Pseudomallei Length = 133

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 38/52 (73%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR+ PF F LG G VIKGWD+G+  M VG  R+LTIPP L YG RGAG VIP
Sbjct: 68  DRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIP 119

>pdb|3UF8|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase With A G95a Surface Mutation From Burkholderia Pseudomallei Complexed With Fk506 Length = 209

Iteration: 1
 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 33/52 (63%), Positives = 37/52 (71%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR+ PF F LG G VIKGWD+G+  M VG  R+LTIPP L YG RGA  VIP
Sbjct: 144 DRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAGVIP 195

>pdb|2LGO|A Chain A, Solution Nmr Structure Of A Fkbp-Type Peptidyl-Prolyl Cis-Trans Isomerase From Giardia Lamblia, Seattle Structural Genomics Center For Infectious Disease Target Gilaa.00840.A Length = 130

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 37/53 (69%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
             R +PF FTLG G+VIKGWDQG+  M +GEK   TIP  LAYG+RG   VIP
Sbjct: 64  RSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFTIPYQLAYGERGYPPVIP 116

>pdb|1U79|A Chain A, Crystal Structure Of Atfkbp13 Length = 129

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 6/55 (10%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTE------MCVGEKRKLTIPPALAYGDRGAG 121
           ++R +P TF +GVG+VIKGWDQG+        M  G KR L IPP LAYGDRGAG
Sbjct: 51  YNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAG 105

>pdb|3JXV|A Chain A, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73 Length = 356

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 34/53 (64%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
            DRD  F F LG GQVIKGWDQG+  M  GE    TIPP LAYG+ G+   IP
Sbjct: 51  RDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPPTIP 103

>pdb|3JYM|A Chain A, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73 Length = 377

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 34/53 (64%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
            DRD  F F LG GQVIKGWDQG+  M  GE    TIPP LAYG+ G+   IP
Sbjct: 67  RDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPPTIP 119

>pdb|1YAT|A Chain A, Improved Calcineurin Inhibition By Yeast Fkbp12-Drug Complexes. Crystallographic And Functional Analysis Length = 113

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 36/52 (69%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR  PF   +GVGQVIKGWD G+ ++ VGEK +LTIP   AYG RG   +IP
Sbjct: 47  DRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPGLIP 98

>pdb|3UQI|A Chain A, Crystallographic Structure Of Fkbp12 From Aedes Aegypti Length = 108

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 63  FKLTLVAMRIHD----RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDR 118
           +  TL   ++ D    R +PF FT+G G+VI+GWD+G+ +M VG++ KL   P  AYG R
Sbjct: 27  YTGTLADGKVFDSSRTRGKPFRFTVGRGEVIRGWDEGVAQMSVGQRAKLVCSPDYAYGSR 86
Query: 119 GAGNVIP 125
           G   VIP
Sbjct: 87  GHPGVIP 93

>pdb|1FKK|A Chain A, Atomic Structure Of Fkbp12, An Immunophilin Binding Protein Length = 107

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVR 132
            DR++PF F LG  +VI+GW++G+ +M VG++ KLTI P  AYG  G   +IP   + + 
Sbjct: 40  RDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIF 99
Query: 133 QSEHSELE 140
             E  +LE
Sbjct: 100 DVELLKLE 107

>pdb|1FKB|A Chain A, Atomic Structure Of The Rapamycin Human Immunophilin Fkbp- 12 Complex Length = 107

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR++PF F LG  +VI+GW++G+ +M VG++ KLTI P  AYG  G   +IP
Sbjct: 41  DRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92

>pdb|3H9R|B Chain B, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 109

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR++PF F LG  +VI+GW++G+ +M VG++ KLTI P  AYG  G   +IP
Sbjct: 43  DRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 94

>pdb|1EYM|A Chain A, Fk506 Binding Protein Mutant, Homodimeric Complex Length = 107

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR++PF F LG  +VI+GW++G+ +M VG++ KLTI P  AYG  G   +IP
Sbjct: 41  DRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92

>pdb|1TCO|C Chain C, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 107

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR++PF F LG  +VI+GW++G+ +M VG++ KLTI P  AYG  G   +IP
Sbjct: 41  DRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92

>pdb|2FAP|A Chain A, The Structure Of The Immunophilin-Immunosuppressant Fkbp12- (C16)-Ethoxy Rapamycin Complex Interacting With Huma Length = 107

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR++PF F LG  +VI+GW++G+ +M VG++ KLTI P  AYG  G   +IP
Sbjct: 41  DRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92

>pdb|1BL4|A Chain A, Fkbp Mutant F36v Complexed With Remodeled Synthetic Ligand Length = 107

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR++PF F LG  +VI+GW++G+ +M VG++ KLTI P  AYG  G   +IP
Sbjct: 41  DRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92

>pdb|1BKF|A Chain A, Fk506 Binding Protein Fkbp Mutant R42kH87V COMPLEX WITH Immunosuppressant Fk506 Length = 107

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
            D+++PF F LG  +VI+GW++G+ +M VG++ KLTI P  AYG  G   +IP
Sbjct: 40  RDKNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGVPGIIP 92

>pdb|2PPP|A Chain A, Crystal Structure Of E60q Mutant Of Fkbp12 Length = 107

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR++PF F LG  +VI+GW +G+ +M VG++ KLTI P  AYG  G   +IP
Sbjct: 41  DRNKPFKFMLGKQEVIRGWQEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92

>pdb|2PPO|A Chain A, Crystal Structure Of E60a Mutant Of Fkbp12 Length = 107

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR++PF F LG  +VI+GW +G+ +M VG++ KLTI P  AYG  G   +IP
Sbjct: 41  DRNKPFKFMLGKQEVIRGWAEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92

>pdb|4DZ2|A Chain A, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase With Surface Mutation R92g From Burkholderia Pseudomallei Complexed With Fk506 Length = 113

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/52 (63%), Positives = 37/52 (71%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR+ PF F LG G VIKGWD+G+  M VG  R+LTIPP L YG  GAG VIP
Sbjct: 48  DRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGAGGAGGVIP 99

>pdb|2DG4|A Chain A, Fk506-Binding Protein Mutant Wf59 Complexed With Rapamycin Length = 107

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR++PF F LG  +VI+G+++G+ +M VG++ KLTI P  AYG  G   +IP
Sbjct: 41  DRNKPFKFMLGKQEVIRGFEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92

>pdb|2DG9|A Chain A, Fk506-Binding Protein Mutant Wl59 Complexed With Rapamycin Length = 107

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR++PF F LG  +VI+G ++G+ +M VG++ KLTI P  AYG  G   +IP
Sbjct: 41  DRNKPFKFMLGKQEVIRGLEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92

>pdb|1R9H|A Chain A, Structural Genomics Of C.Elegans: Fkbp-Type Peptidylprolyl Isomerase Length = 135

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 35/63 (55%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVR 132
            DR   F+F LG G VIKGWD G+  M  GE  + TI     YGD G+   IPGG + + 
Sbjct: 54  RDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIF 113
Query: 133 QSE 135
           + E
Sbjct: 114 EVE 116

>pdb|1KT0|A Chain A, Structure Of The Large Fkbp-like Protein, Fkbp51, Involved In Steroid Receptor Complexes Length = 457

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 32/53 (60%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           HDR++PF F+LG GQVIK WD G+  M  GE   L   P  AYG  G+   IP
Sbjct: 71  HDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCKPEYAYGSAGSLPKIP 123

>pdb|3O5E|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Vi Length = 144

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 32/53 (60%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           HDR++PF F+LG GQVIK WD G+  M  GE   L   P  AYG  G+   IP
Sbjct: 75  HDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIP 127

>pdb|3O5G|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form I Length = 128

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 32/53 (60%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           HDR++PF F+LG GQVIK WD G+  M  GE   L   P  AYG  G+   IP
Sbjct: 59  HDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIP 111

>pdb|3O5L|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form I Length = 128

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 32/53 (60%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           HDR++PF F+LG GQVIK WD G+  M  GE   L   P  AYG  G+   IP
Sbjct: 59  HDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIP 111

>pdb|4DRH|A Chain A, Co-crystal Structure Of The Ppiase Domain Of Fkbp51, Rapamycin And The Frb Fragment Of Mtor At Low Ph Length = 144

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 32/53 (60%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           HDR++PF F+LG GQVIK WD G+  M  GE   L   P  AYG  G+   IP
Sbjct: 75  HDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIP 127

>pdb|1C9H|A Chain A, Crystal Structure Of Fkbp12.6 In Complex With Rapamycin Length = 107

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
            DR++PF F +G  +VIKG+++G  +M +G++ KLT  P +AYG  G   VIP
Sbjct: 40  RDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIP 92

>pdb|1PBK|A Chain A, Homologous Domain Of Human Fkbp25 Length = 116

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 77  QPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG 119
           +P +F +GVG+VI+GWD+ L  M  GEK +L I P  AYG +G
Sbjct: 52  KPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKG 94

>pdb|1KT1|A Chain A, Structure Of The Large Fkbp-Like Protein, Fkbp51, Involved In Steroid Receptor Complexes Length = 457

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 32/53 (60%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           HDR++PF F++G GQVIK WD G+  M  GE   L   P  AYG  G+   IP
Sbjct: 71  HDRNEPFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGATGSLPKIP 123

>pdb|3KZ7|A Chain A, C-Terminal Domain Of Murine Fkbp25 Rapamycin Complex Length = 119

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 77  QPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG 119
           +P +F +GVG+VI+GWD+ L  M  GEK +L I P  AYG +G
Sbjct: 55  KPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKG 97

>pdb|3O5D|A Chain A, Crystal Structure Of A Fragment Of Fkbp51 Comprising The Fk1 And Fk2 Domains Length = 264

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 32/53 (60%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           HDR++PF F+LG GQVIK WD G+  M  GE   L   P  AYG  G+   IP
Sbjct: 75  HDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIP 127

>pdb|2VN1|A Chain A, Crystal Structure Of The Fk506-Binding Domain Of Plasmodium Falciparum Fkbp35 In Complex With Fk506 Length = 129

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 30/53 (56%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPG 126
           DR+ PF F L  G+VIKGWD  ++ M   EK  + I     YGD G G  IPG
Sbjct: 60  DRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVRIESMYGYGDEGCGESIPG 112

>pdb|2OFN|A Chain A, Solution Structure Of Fk506-Binding Domain (Fkbd)of Fkbp35 From Plasmodium Falciparum Length = 135

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 30/53 (56%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPG 126
           DR+ PF F L  G+VIKGWD  ++ M   EK  + I     YGD G G  IPG
Sbjct: 60  DRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVRIESMYGYGDEGCGESIPG 112

>pdb|2KI3|A Chain A, Structural And Biochemical Characterization Of Fk506 Binding Domain From Plasmodium Vivax Length = 126

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPG 126
           +R+ PF F LG G+VIKGWD  +  M   EK  + +     YG+ G G  IPG
Sbjct: 59  ERNVPFKFHLGQGEVIKGWDICVASMTKNEKCSVRLDSKYGYGEEGCGESIPG 111

>pdb|1ROT|A Chain A, Structure Of Fkbp59-I, The N-Terminal Domain Of A 59 Kda Fk506-Binding Protein, Nmr, Minimized Average Structure Length = 149

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR   F+F LG G+VIK WD  +  M VGE  ++T  P  AYG  G+   IP
Sbjct: 71  DRKDKFSFDLGKGEVIKAWDIAVATMKVGELCRITCKPEYAYGSAGSPPKIP 122

>pdb|1Q1C|A Chain A, Crystal Structure Of N(1-260) Of Human Fkbp52 Length = 280

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 29/52 (55%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR   F+F LG G+VIK WD  +  M VGE   +T  P  AYG  G+   IP
Sbjct: 92  DRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIP 143

>pdb|1N1A|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human Fkbp52 Length = 140

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 29/52 (55%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR   F+F LG G+VIK WD  +  M VGE   +T  P  AYG  G+   IP
Sbjct: 72  DRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIP 123

>pdb|4DRJ|A Chain A, O-crystal Structure Of The Ppiase Domain Of Fkbp52, Rapamycin And The Frb Fragment Of Mtor Length = 144

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 29/52 (55%)
Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
           DR   F+F LG G+VIK WD  +  M VGE   +T  P  AYG  G+   IP
Sbjct: 76  DRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIP 127

>pdb|1IX5|A Chain A, Solution Structure Of The Methanococcus Thermolithotrophicus Fkbp Length = 151

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 74  DRD-QPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDR 118
           DR+ +P  F +G GQ+I+G+++ + +M VG+++ + IP   AYG+R
Sbjct: 39  DREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAYGNR 84

>pdb|3PRB|A Chain A, Structural Analysis Of Protein Folding By The Methanococcus Jannaschii Chaperone Fkbp26 Length = 231

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 78  PFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDR 118
           P     G GQV+ G D+ + EM VGE+R++ +PP  A+G R
Sbjct: 43  PVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKR 83

>pdb|3PR9|A Chain A, Structural Analysis Of Protein Folding By The Methanococcus Jannaschii Chaperone Fkbp26 Length = 157

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 78  PFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDR 118
           P     G GQV+ G D+ + EM VGE+R++ +PP  A+G R
Sbjct: 43  PVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKR 83

>pdb|1JVW|A Chain A, Trypanosoma Cruzi Macrophage Infectivity Potentiator (Tcmip) Length = 167

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 125
            +R +P TF     +VIKGW + L  M  G++ +L IP  LAYG  G G +IP
Sbjct: 77  RERGKPTTFR--PNEVIKGWTEALQLMREGDRWRLFIPYDLAYGVTGGGGMIP 127

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	319
2pbc_A	102	FK506-binding protein 2; endoplasmic reticulum, is	4e-34
2vn1_A	129	70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR	3e-33
3o5q_A	128	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	2e-32
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	4e-32
2lgo_A	130	FKBP; infectious disease, isomerase, giardiasis, s	4e-32
1yat_A	113	FK506 binding protein; HET: FK5; 2.50A {Saccharomy	4e-32
2ppn_A	107	FK506-binding protein 1A; high resolution protein	4e-32
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	8e-32
3o5e_A	144	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	1e-31
4dip_A	125	Peptidyl-prolyl CIS-trans isomerase FKBP14; struct	1e-31
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	2e-31
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	6e-31
2awg_A	118	38 kDa FK-506 binding protein; FKBP-type, ppiase,	6e-30
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	1e-29
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	2e-19
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	4e-29
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	2e-25
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	2e-21
3kz7_A	119	FK506-binding protein 3; FKPB ppiase rapamycin, is	2e-28
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	5e-28
2d9f_A	135	FK506-binding protein 8 variant; FKBP, rapamycin,	3e-27
2jwx_A	157	FKBP38NTD, FK506-binding protein 8 variant; apopto	1e-26
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	6e-25
1jvw_A	167	Macrophage infectivity potentiator; chagas disease	6e-23
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	5e-21
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	6e-21
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	6e-14
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	6e-20
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	2e-18
2if4_A	338	ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha,	2e-13
1ix5_A	151	FKBP; ppiase, isomerase; NMR {Methanothermococcust	7e-13
4dt4_A	169	FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer;	5e-12
2kr7_A	151	FKBP-type peptidyl-prolyl CIS-trans isomerase SLY;	9e-12
3pr9_A	157	FKBP-type peptidyl-prolyl CIS-trans isomerase; FKB	3e-11
3prb_A	231	FKBP-type peptidyl-prolyl CIS-trans isomerase; cha	5e-11
2k8i_A	171	SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase,	5e-11
2kfw_A	196	FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD	7e-11
3cgm_A	158	SLYD, peptidyl-prolyl CIS-trans isomerase; chapero	2e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-10
1p5q_A	336	FKBP52, FK506-binding protein 4; isomerase; 2.80A	9e-07
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	5e-04

>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens} Length = 102

 Score =  119 bits (301), Expect = 4e-34
 Identities = 37/55 (67%), Positives = 41/55 (74%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
             ++QPF F+LG GQVIKGWDQGL  MC GEKRKL IP  L YG+RGA   IPGG
Sbjct: 30  LPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGG 84

>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A Length = 129

 Score =  118 bits (297), Expect = 3e-33
 Identities = 25/55 (45%), Positives = 30/55 (54%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
            DR+ PF F L  G+VIKGWD  ++ M   EK  + I     YGD G G  IPG 
Sbjct: 59  FDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVRIESMYGYGDEGCGESIPGN 113

>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A Length = 128

 Score =  115 bits (291), Expect = 2e-32
 Identities = 27/55 (49%), Positives = 32/55 (58%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
           HDR++PF F+LG GQVIK WD G+  M  GE   L   P  AYG  G+   IP  
Sbjct: 59  HDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSN 113

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A* Length = 133

 Score =  115 bits (290), Expect = 4e-32
 Identities = 34/54 (62%), Positives = 38/54 (70%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
           DR+ PF F LG G VIKGWD+G+  M VG  R+LTIPP L YG RGAG VIP  
Sbjct: 68  DRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIPPN 121

>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia} Length = 130

 Score =  115 bits (290), Expect = 4e-32
 Identities = 32/55 (58%), Positives = 37/55 (67%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
             R +PF FTLG G+VIKGWDQG+  M +GEK   TIP  LAYG+RG   VIP  
Sbjct: 64  RSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFTIPYQLAYGERGYPPVIPPK 118

>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1 Length = 113

 Score =  114 bits (288), Expect = 4e-32
 Identities = 30/55 (54%), Positives = 36/55 (65%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
            DR  PF   +GVGQVIKGWD G+ ++ VGEK +LTIP   AYG RG   +IP  
Sbjct: 46  VDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPGLIPPN 100

>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ... Length = 107

 Score =  114 bits (288), Expect = 4e-32
 Identities = 26/55 (47%), Positives = 37/55 (67%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
            DR++PF F LG  +VI+GW++G+ +M VG++ KLTI P  AYG  G   +IP  
Sbjct: 40  RDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPH 94

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1 Length = 135

 Score =  114 bits (288), Expect = 8e-32
 Identities = 27/55 (49%), Positives = 31/55 (56%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
            DR   F+F LG G VIKGWD G+  M  GE  + TI     YGD G+   IPGG
Sbjct: 54  RDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGG 108

>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A Length = 144

 Score =  114 bits (288), Expect = 1e-31
 Identities = 27/55 (49%), Positives = 32/55 (58%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
           HDR++PF F+LG GQVIK WD G+  M  GE   L   P  AYG  G+   IP  
Sbjct: 75  HDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSN 129

>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens} Length = 125

 Score =  113 bits (286), Expect = 1e-31
 Identities = 34/57 (59%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 71  RIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
             H+  QP  FTLG+ + +KGWDQGL  MCVGEKRKL IPPAL YG  G G  IP  
Sbjct: 54  HKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEKRKLIIPPALGYGKEGKGK-IPPE 109

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 1euv_B 3v60_A 3v61_A 3v62_A* Length = 209

 Score =  116 bits (292), Expect = 2e-31
 Identities = 33/53 (62%), Positives = 37/53 (69%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPG 126
           DR+ PF F LG G VIKGWD+G+  M VG  R+LTIPP L YG RGA  VIP 
Sbjct: 144 DRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAGVIPP 196

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens} Length = 134

 Score =  112 bits (282), Expect = 6e-31
 Identities = 17/54 (31%), Positives = 22/54 (40%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPG 126
           + R  P    LG    + G + GL  M  GE  +    P  AYG  G   +IP 
Sbjct: 66  YFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGTLGCPPLIPP 119

>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A Length = 118

 Score =  109 bits (274), Expect = 6e-30
 Identities = 17/54 (31%), Positives = 22/54 (40%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
             +    FTLG   VI+  D  +  M VGE   +T      YG +G    IP  
Sbjct: 51  QEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGRSPYIPPH 104

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A Length = 280

 Score =  113 bits (283), Expect = 1e-29
 Identities = 24/55 (43%), Positives = 29/55 (52%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
            DR   F+F LG G+VIK WD  +  M VGE   +T  P  AYG  G+   IP  
Sbjct: 91  LDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPN 145

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A Length = 280

 Score = 85.3 bits (211), Expect = 2e-19
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 78  PFTFTLGVGQVIK---GWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV-IPGG 127
              F +G G+ +    G ++ +  M  GE   + + P+ A+G  G     IP  
Sbjct: 207 ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPN 260

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356

 Score =  113 bits (284), Expect = 4e-29
 Identities = 31/55 (56%), Positives = 34/55 (61%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
            DRD  F F LG GQVIKGWDQG+  M  GE    TIPP LAYG+ G+   IP  
Sbjct: 51  RDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPPTIPAN 105

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356

 Score =  103 bits (258), Expect = 2e-25
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGN--VIPGG 127
           HD  +PF F      VI+G D+ +  M  GE   +TIPP  AYG   +    ++P  
Sbjct: 285 HDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPN 341

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A Length = 356

 Score = 91.8 bits (228), Expect = 2e-21
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 5/58 (8%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG-----AGNVIPG 126
            + +   FT+  G +     + +  M  GEK  L + P   +G+ G      G  +P 
Sbjct: 164 SKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPP 221

>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} PDB: 1pbk_A* Length = 119

 Score =  105 bits (264), Expect = 2e-28
 Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG-AGNVIPGG 127
               +P +F +GVG+VI+GWD+ L  M  GEK +L I P  AYG +G     IP  
Sbjct: 51  KKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPN 106

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A Length = 129

 Score =  104 bits (262), Expect = 5e-28
 Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 11/65 (16%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLT------EMCVGEKRKLTIPPALAYGDRGAG-----N 122
           +R +P TF +GVG+VIKGWDQG+        M  G KR L IPP LAYGDRGAG      
Sbjct: 52  NRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSC 111

Query: 123 VIPGG 127
           +IP  
Sbjct: 112 LIPPA 116

>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 135

 Score =  102 bits (257), Expect = 3e-27
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGN-VIPGG 127
             +    FTLG   VI+  D  +  M VGE   +T      YG +G+ +  IP  
Sbjct: 55  QEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPH 109

>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens} Length = 157

 Score =  101 bits (254), Expect = 1e-26
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGA-GNVIPGG 127
             +    FTLG   VI+  D  +  M VGE   +T      YG +G+    IP  
Sbjct: 81  QEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPH 135

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana} Length = 180

 Score = 98.0 bits (244), Expect = 6e-25
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 73  HDRDQPFTFTLGV-GQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV--IPG 126
               QP    LG   + + G   G+  M  GE+  + +   LAYG  G  +   +P 
Sbjct: 89  WHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPP 145

>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1 Length = 167

 Score = 92.4 bits (230), Expect = 6e-23
 Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
           +R +P TF     +VIKGW + L  M  G++ +L IP  LAYG  G G +IP  
Sbjct: 78  ERGKPTTF--RPNEVIKGWTEALQLMREGDRWRLFIPYDLAYGVTGGGGMIPPY 129

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A* Length = 213

 Score = 88.2 bits (219), Expect = 5e-21
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
               +P TF   V QVI GW + L  M  G   ++ +P  LAYG R  G  I   
Sbjct: 145 EKTGKPATF--QVSQVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGGPIGPN 197

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A Length = 457

 Score = 91.7 bits (227), Expect = 6e-21
 Identities = 27/55 (49%), Positives = 32/55 (58%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
           HDR++PF F+LG GQVIK WD G+  M  GE   L   P  AYG  G+   IP  
Sbjct: 71  HDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCKPEYAYGSAGSLPKIPSN 125

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A Length = 457

 Score = 71.2 bits (174), Expect = 6e-14
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 23/124 (18%)

Query: 76  DQPFTFTLGVGQ---VIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV-IPGGLSAV 131
            +   FT+G G+   +  G D+ L +M   E+  L + P   +G+ G     I       
Sbjct: 183 CRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIE------ 236

Query: 132 RQSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFK 191
               ++EL               L    +  +   M    +       +++G    +  K
Sbjct: 237 ---PNAELIYEVT----------LKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGK 283

Query: 192 PHRA 195
             +A
Sbjct: 284 YMQA 287

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} Length = 219

 Score = 85.5 bits (212), Expect = 6e-20
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 77  QPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
           QP  F   +  VI GW   L  M  G K +L IP   AYG  GAG++I   
Sbjct: 157 QPQWF--RLDSVISGWTSALQNMPTGAKWRLVIPSDQAYGAEGAGDLIDPF 205

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A Length = 224

 Score = 81.7 bits (202), Expect = 2e-18
 Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPG 126
            R +P +F   +  VI GW +GL  +  G K KL IPP LAYG  G   + P 
Sbjct: 161 TRGEPLSF--RLDGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPGIPPN 211

>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} Length = 338

 Score = 68.9 bits (168), Expect = 2e-13
 Identities = 22/126 (17%), Positives = 36/126 (28%), Gaps = 19/126 (15%)

Query: 73  HDRDQPFTFTLGV-GQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAG--NVIPGGLS 129
               QP    LG   + + G   G+  M  GE+  + +   LAYG  G      +P    
Sbjct: 89  WHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVP---- 144

Query: 130 AVRQSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQS 189
                  ++L          +        +    +  M       A   R+  G    + 
Sbjct: 145 -----PMADLLYE-------VEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNSLFKE 192

Query: 190 FKPHRA 195
            K   A
Sbjct: 193 EKLEEA 198

>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1 Length = 151

 Score = 64.3 bits (157), Expect = 7e-13
 Identities = 16/47 (34%), Positives = 31/47 (65%)

Query: 77  QPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV 123
           +P  F +G GQ+I+G+++ + +M VG+++ + IP   AYG+R    +
Sbjct: 43  EPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAYGNRNEMLI 89

>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli} Length = 169

 Score = 62.3 bits (152), Expect = 5e-12
 Identities = 13/50 (26%), Positives = 24/50 (48%)

Query: 74  DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV 123
           +  +P  F LG   + +G +Q L  + VG+K   ++ P  A+G      +
Sbjct: 50  NNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLI 99

>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori} Length = 151

 Score = 61.1 bits (149), Expect = 9e-12
 Identities = 13/51 (25%), Positives = 26/51 (50%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV 123
           +   +P  F +G  Q+I G ++ + +  +GE  ++ I P  AYG   +  +
Sbjct: 31  NISKEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYESSYL 81

>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} PDB: 3pra_A Length = 157

 Score = 60.1 bits (146), Expect = 3e-11
 Identities = 18/48 (37%), Positives = 27/48 (56%)

Query: 76  DQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV 123
             P     G GQV+ G D+ + EM VGE+R++ +PP  A+G R    +
Sbjct: 41  YGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKRDPSKI 88

>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A Length = 231

 Score = 60.6 bits (147), Expect = 5e-11
 Identities = 18/48 (37%), Positives = 27/48 (56%)

Query: 76  DQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV 123
             P     G GQV+ G D+ + EM VGE+R++ +PP  A+G R    +
Sbjct: 41  YGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKRDPSKI 88

>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli} Length = 171

 Score = 59.6 bits (145), Expect = 5e-11
 Identities = 13/49 (26%), Positives = 19/49 (38%)

Query: 76  DQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 124
             P  +  G G +I G +  L    VG+K  + +    AYG      V 
Sbjct: 29  SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDENLVQ 77

>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli} Length = 196

 Score = 59.7 bits (145), Expect = 7e-11
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 76  DQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGLSAVRQSE 135
             P  +  G G +I G +  L    VG+K  + +    AYG      V           +
Sbjct: 29  SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVD 88

Query: 136 HSELEISTKFFLE 148
             EL++  +F  E
Sbjct: 89  --ELQVGMRFLAE 99

>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A* Length = 158

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 11/49 (22%), Positives = 18/49 (36%)

Query: 76  DQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 124
               ++  G   +I G ++ L     GE  +  +P   AYG      V 
Sbjct: 24  QGELSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDPEGVQ 72

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 59.5 bits (143), Expect = 5e-10
 Identities = 56/301 (18%), Positives = 98/301 (32%), Gaps = 94/301 (31%)

Query: 9   FGENRNPFYKTPCIRPRSTLSLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLV 68
           + E R+  Y    +        + Y++     R    L+PY+ ++  +   +P   + + 
Sbjct: 112 YIEQRDRLYNDNQV-------FAKYNV----SR----LQPYLKLRQALLELRPAKNVLID 156

Query: 69  AMRIHDRDQPFTFTLGVGQVIKGWDQGLT-EMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
            +            LG G   K W   +  ++C+  K +  +   + + +          
Sbjct: 157 GV------------LGSG---KTW---VALDVCLSYKVQCKMDFKIFWLNLKN------- 191

Query: 128 LSAVRQSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRI 187
                 S  + LE+  K   ++ PN        +T +   + N +   H   +    RR+
Sbjct: 192 ----CNSPETVLEMLQKLLYQIDPN--------WTSRSDHSSNIKLRIHSI-QAE-LRRL 237

Query: 188 QSFKPHRAESEKLYAHCSSAYALLVK---KTPSIHNCFLLSTKSMLTFARNQSTI----- 239
              KP        Y +C     LLV    +     N F LS K +LT  R +        
Sbjct: 238 LKSKP--------YENC-----LLVLLNVQNAKAWNAFNLSCKILLT-TRFKQVTDFLSA 283

Query: 240 ------------PAWTHDYTRLALLLPFLQYEF---PPEQSQCLPL-LGIRAQHQRGHMI 283
                          T D    +LLL +L       P E     P  L I A+  R  + 
Sbjct: 284 ATTTHISLDHHSMTLTPDEV-KSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLA 342

Query: 284 T 284
           T
Sbjct: 343 T 343

>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336

 Score = 48.7 bits (116), Expect = 9e-07
 Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 76  DQPFTFTLGVGQ---VIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG 119
            +   F +G G+   +  G ++ +  M  GE   + + P+ A+G  G
Sbjct: 62  QRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVG 108

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 39.2 bits (90), Expect = 5e-04
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 4/29 (13%)

Query: 188 QSFKPHRAESE-KLYAHCSSAYALLVKKT 215
           Q+ K  + ++  KLYA   SA AL +K T
Sbjct: 20  QALK--KLQASLKLYAD-DSAPALAIKAT 45

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	319
2if4_A	338	ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha,	100.0
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	99.98
1p5q_A	336	FKBP52, FK506-binding protein 4; isomerase; 2.80A	99.95
2f4e_A	180	ATFKBP42; FKBP-like, alpha-beta, signaling protein	99.91
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	99.91
1yat_A	113	FK506 binding protein; HET: FK5; 2.50A {Saccharomy	99.9
2lkn_A	165	AH receptor-interacting protein; FKBP-type domain,	99.89
2ppn_A	107	FK506-binding protein 1A; high resolution protein	99.89
3o5e_A	144	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	99.89
3kz7_A	119	FK506-binding protein 3; FKPB ppiase rapamycin, is	99.89
2y78_A	133	Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase,	99.89
3o5q_A	128	Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506	99.89
1jvw_A	167	Macrophage infectivity potentiator; chagas disease	99.89
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	99.88
2lgo_A	130	FKBP; infectious disease, isomerase, giardiasis, s	99.88
3uf8_A	209	Ubiquitin-like protein SMT3, peptidyl-prolyl CIS-	99.88
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	99.88
4dip_A	125	Peptidyl-prolyl CIS-trans isomerase FKBP14; struct	99.87
2vn1_A	129	70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR	99.87
3b7x_A	134	FK506-binding protein 6; isomerase, repeat, rotama	99.87
3jxv_A	356	70 kDa peptidyl-prolyl isomerase; FKBP- binding do	99.87
2jwx_A	157	FKBP38NTD, FK506-binding protein 8 variant; apopto	99.87
3oe2_A	219	Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase,	99.86
1kt0_A	457	FKBP51, 51 kDa FK506-binding protein; FKBP-like pp	99.86
1fd9_A	213	Protein (macrophage infectivity potentiator prote;	99.86
2pbc_A	102	FK506-binding protein 2; endoplasmic reticulum, is	99.86
1u79_A	129	FKBP-type peptidyl-prolyl CIS-trans isomerase 3; T	99.85
2awg_A	118	38 kDa FK-506 binding protein; FKBP-type, ppiase,	99.85
1q6h_A	224	FKBP-type peptidyl-prolyl CIS-trans isomerase FKP;	99.85
2d9f_A	135	FK506-binding protein 8 variant; FKBP, rapamycin,	99.84
1q1c_A	280	FK506-binding protein 4; rotamase, TPR repeat, nuc	99.82
1hxv_A	113	Trigger factor; FKBP fold, ppiase, chaperone; NMR	99.62
4dt4_A	169	FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer;	99.61
3pr9_A	157	FKBP-type peptidyl-prolyl CIS-trans isomerase; FKB	99.58
2k8i_A	171	SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase,	99.55
3prb_A	231	FKBP-type peptidyl-prolyl CIS-trans isomerase; cha	99.54
2kr7_A	151	FKBP-type peptidyl-prolyl CIS-trans isomerase SLY;	99.53
2kfw_A	196	FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD	99.51
1ix5_A	151	FKBP; ppiase, isomerase; NMR {Methanothermococcust	99.51
3cgm_A	158	SLYD, peptidyl-prolyl CIS-trans isomerase; chapero	99.41
1w26_A	432	Trigger factor, TF; chaperone, protein folding, ri	99.4
3rkv_A	162	Putative peptidylprolyl isomerase; structural geno	99.38
1t11_A	392	Trigger factor, TF; helix-turn-helix, four-helix-b	99.22
2fbn_A	198	70 kDa peptidylprolyl isomerase, putative; sulfur	98.87
1ihg_A	370	Cyclophilin 40; ppiase immunophilin tetratricopept	98.74
2hr2_A	159	Hypothetical protein; alpha-alpha superhelix fold,	98.43
4gco_A	126	Protein STI-1; structural genomics, PSI-biology, m	98.32
3gty_X	433	Trigger factor, TF; chaperone-client complex, cell	98.16
3upv_A	126	Heat shock protein STI1; TPR-fold, adaptor protein	97.43
3sz7_A	164	HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G	97.33
4gcn_A	127	Protein STI-1; structural genomics, PSI-biology, m	96.82
3q49_B	137	STIP1 homology and U box-containing protein 1; E3	96.44
2dba_A	148	Smooth muscle cell associated protein-1, isoform 2	96.25
4ga2_A	150	E3 SUMO-protein ligase ranbp2; TPR motif, nuclear	96.12
3ieg_A	359	DNAJ homolog subfamily C member 3; TPR motif, chap	95.82
2c2l_A	281	CHIP, carboxy terminus of HSP70-interacting protei	95.27
3urz_A	208	Uncharacterized protein; tetratricopeptide repeats	95.13
4gco_A	126	Protein STI-1; structural genomics, PSI-biology, m	95.08
1jvw_A	167	Macrophage infectivity potentiator; chagas disease	95.01
1wao_1	477	Serine/threonine protein phosphatase 5; hydrolase,	95.0
2xcb_A	142	PCRH, regulatory protein PCRH; protein transport,	94.89
1elw_A	118	TPR1-domain of HOP; HOP, TPR-domain, peptide-compl	94.89
4ga2_A	150	E3 SUMO-protein ligase ranbp2; TPR motif, nuclear	94.82
1zu2_A	158	Mitochondrial import receptor subunit TOM20-3; TPR	94.82
2vgx_A	148	Chaperone SYCD; alternative dimer assembly, tetrat	94.67
1a17_A	166	Serine/threonine protein phosphatase 5; hydrolase,	94.62
1hxi_A	121	PEX5, peroxisome targeting signal 1 receptor PEX5;	94.57
2d9f_A	135	FK506-binding protein 8 variant; FKBP, rapamycin,	94.41
2kc7_A	99	BFR218_protein; tetratricopeptide repeat, all-alph	94.41
2pbc_A	102	FK506-binding protein 2; endoplasmic reticulum, is	94.24
1na3_A	91	Designed protein CTPR2; de novo protein; HET: IPT;	93.96
3vtx_A	184	MAMA; tetratricopeptide repeats (TPR) containing p	93.86
2l6j_A	111	TPR repeat-containing protein associated with HSP;	93.64
1elr_A	131	TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp	93.52
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	93.41
1r9h_A	135	FKB-6, FK506 binding protein family; structural ge	93.38
3upv_A	126	Heat shock protein STI1; TPR-fold, adaptor protein	93.32
3gyz_A	151	Chaperone protein IPGC; asymmetric homodimer, tetr	93.22
3k9i_A	117	BH0479 protein; putative protein binding protein,	93.2
2xev_A	129	YBGF; tetratricopeptide, alpha-helical, metal bind	93.09
3sz7_A	164	HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G	92.84
2vyi_A	131	SGTA protein; chaperone, TPR repeat, phosphoprotei	92.83
2lni_A	133	Stress-induced-phosphoprotein 1; structural genomi	92.18
2xcb_A	142	PCRH, regulatory protein PCRH; protein transport,	92.03
3gyz_A	151	Chaperone protein IPGC; asymmetric homodimer, tetr	92.01
2gw1_A	514	Mitochondrial precursor proteins import receptor;	91.92
2h6f_A	382	Protein farnesyltransferase/geranylgeranyltransfer	91.8
3vtx_A	184	MAMA; tetratricopeptide repeats (TPR) containing p	91.57
2h6f_A	382	Protein farnesyltransferase/geranylgeranyltransfer	91.31
4i17_A	228	Hypothetical protein; TPR repeats protein, structu	90.95
3ma5_A	100	Tetratricopeptide repeat domain protein; NESG, str	90.84
4gyw_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	90.71
2vgx_A	148	Chaperone SYCD; alternative dimer assembly, tetrat	90.68
2pl2_A	217	Hypothetical conserved protein TTC0263; TPR, prote	90.67
4gcn_A	127	Protein STI-1; structural genomics, PSI-biology, m	90.02
2lni_A	133	Stress-induced-phosphoprotein 1; structural genomi	89.8
3q49_B	137	STIP1 homology and U box-containing protein 1; E3	89.77
3k9i_A	117	BH0479 protein; putative protein binding protein,	89.43
2e2e_A	177	Formate-dependent nitrite reductase complex NRFG;	89.14
4i17_A	228	Hypothetical protein; TPR repeats protein, structu	89.11
3uq3_A	258	Heat shock protein STI1; HSP90, peptide binding, c	88.96
1elw_A	118	TPR1-domain of HOP; HOP, TPR-domain, peptide-compl	88.23
2kck_A	112	TPR repeat; tetratricopeptide repeat, structural g	87.89
2l6j_A	111	TPR repeat-containing protein associated with HSP;	87.77
1hxi_A	121	PEX5, peroxisome targeting signal 1 receptor PEX5;	87.77
4gyw_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	87.58
3fp2_A	537	TPR repeat-containing protein YHR117W; TOM71, mito	87.21
2kat_A	115	Uncharacterized protein; NESG, structure, structur	87.18
2r5s_A	176	Uncharacterized protein VP0806; APC090868.1, vibri	86.83
1hh8_A	213	P67PHOX, NCF-2, neutrophil cytosol factor 2; cell	86.79
1na0_A	125	Designed protein CTPR3; de novo protein; HET: IPT;	86.73
2kat_A	115	Uncharacterized protein; NESG, structure, structur	86.43
1pc2_A	152	Mitochondria fission protein; unknown function; NM	86.32
3urz_A	208	Uncharacterized protein; tetratricopeptide repeats	85.8
3rkv_A	162	Putative peptidylprolyl isomerase; structural geno	85.67
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	85.65
2xev_A	129	YBGF; tetratricopeptide, alpha-helical, metal bind	85.39
2pl2_A	217	Hypothetical conserved protein TTC0263; TPR, prote	85.33
2c2l_A	281	CHIP, carboxy terminus of HSP70-interacting protei	85.14
2q7f_A	243	YRRB protein; TPR, protein binding; 2.49A {Bacillu	84.84
3hym_B	330	Cell division cycle protein 16 homolog; APC, anaph	84.33
1a17_A	166	Serine/threonine protein phosphatase 5; hydrolase,	83.93
3qky_A	261	Outer membrane assembly lipoprotein YFIO; membrane	83.81
3fp2_A	537	TPR repeat-containing protein YHR117W; TOM71, mito	83.23
2vyi_A	131	SGTA protein; chaperone, TPR repeat, phosphoprotei	82.97
3mkr_A	291	Coatomer subunit epsilon; tetratricopeptide repeat	82.64
3qky_A	261	Outer membrane assembly lipoprotein YFIO; membrane	82.15
2vsy_A	568	XCC0866; transferase, glycosyl transferase, GT-B,	81.65
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	81.6
2dba_A	148	Smooth muscle cell associated protein-1, isoform 2	81.36
2yhc_A	225	BAMD, UPF0169 lipoprotein YFIO; essential BAM comp	80.88
2hr2_A	159	Hypothetical protein; alpha-alpha superhelix fold,	80.69

>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}

Probab=100.00  E-value=9.7e-35  Score=274.77  Aligned_cols=268  Identities=14%  Similarity=0.094  Sum_probs=180.0

Q ss_pred             eeecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeC-CcEEeeeccCCCCeEEeeCCC-cccccHhHhhhccccCcEE
Q psy5048          28 LSLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKL-TLVAMRIHDRDQPFTFTLGVG-QVIKGWDQGLTEMCVGEKR  105 (319)
Q Consensus        28 l~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~d-g~v~d~s~~~~~p~~f~lG~~-~~i~Gle~al~~Mk~GE~~  105 (319)
                      +......+.+.++++|.|..|..|+.|+|| |++++.+ |++||+++..+.|++|.+|.+ .+|+||+++|.+|++||++
T Consensus        44 ~~~~~~~~~~~~~~~g~g~~~~~gd~v~v~-y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~  122 (338)
T 2if4_A           44 AEVLDEKVSKQIIKEGHGSKPSKYSTCFLH-YRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERA  122 (338)
T ss_dssp             CEEEETTEEEEEEECCBSCCCCTTCEEEEE-EEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCCBTCEE
T ss_pred             ceeCCCCeEEEEEeCCCCCCCCCCCEEEEE-EEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCCCCCeE
Confidence            345566788899999999999999999986 9999985 999999988788999999998 8999999999999999999


Q ss_pred             EEEeCCCCCCCCCCC--CCCCCCCCeEEEEEEEeeeeecc--chhhccCccccchhhhhhhhcCCcccccchHHHHHHHH
Q psy5048         106 KLTIPPALAYGDRGA--GNVIPGGLSAVRQSEHSELEIST--KFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRD  181 (319)
Q Consensus       106 ~v~i~p~~ayG~~g~--~~~Ip~~~~l~feVeL~~v~~~~--~~~~~m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~  181 (319)
                      .|+|||+++||..+.  .+.||++++++|+|+|+++...+  ...|.++.+++...+...+..|+.++..+++..+...-
T Consensus       123 ~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y  202 (338)
T 2if4_A          123 LVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQY  202 (338)
T ss_dssp             EEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHH
T ss_pred             EEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence            999999999999987  35699999999999999998644  35789999999999999999999998888776544311


Q ss_pred             hhhhhcccC-------Cc-chhHHH----HHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHH
Q psy5048         182 RGKRRIQSF-------KP-HRAESE----KLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRL  249 (319)
Q Consensus       182 ~~k~~~~~~-------k~-~~~~~~----~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~  249 (319)
                       .+......       .. .+....    .++.++-.++..+..+..|+..|..+|+.+|       +|++||||+|.++
T Consensus       203 -~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p-------~~~~a~~~lg~a~  274 (338)
T 2if4_A          203 -EMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEE-------KNPKALFRRGKAK  274 (338)
T ss_dssp             -HHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCT-------TCHHHHHHHHHHH
T ss_pred             -HHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHH
Confidence             11110000       00 001111    1222333366777999999999999999999       9999999999988


Q ss_pred             HhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHHHHHHHHhcccCCCCCCchhh
Q psy5048         250 ALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFFLFYNMSSPLNKVN  304 (319)
Q Consensus       250 ~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~~y~~mF~~~~~~~~~~~  304 (319)
                      ..+++++        |++++|+|..+...|..+..+++.+.++++++|.+||+..+...+|.+
T Consensus       275 ~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~~~~  337 (338)
T 2if4_A          275 AELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGAKSK  337 (338)
T ss_dssp             HTTTCHHHHHHHHHHTTC---------------------------------------------
T ss_pred             HHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence            8888886        899999999999999999999999999999999999999888777653

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=99.98  E-value=4.7e-31  Score=259.29  Aligned_cols=277  Identities=14%  Similarity=0.138  Sum_probs=216.9

Q ss_pred             cccCCCCCCCCCCCCCCCCCCeeecccceEEE-------------EeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeee
Q psy5048           7 LPFGENRNPFYKTPCIRPRSTLSLSPYSLSLI-------------LPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRI   72 (319)
Q Consensus         7 ~~~g~~g~~~~~~p~Ipp~atl~~d~~lv~~~-------------i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s   72 (319)
                      ++||..|.|    |.||||++|.|+++++++.             +++.|.|. +|..++.|+|| |++++ ||++|+++
T Consensus       111 ~~yg~~g~~----~~i~~~~~l~~~v~l~~~~~~~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~-y~g~~-~g~~f~~~  184 (457)
T 1kt0_A          111 YAYGSAGSL----PKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIH-LEGRC-GGRMFDCR  184 (457)
T ss_dssp             GTTTTTCBT----TTBCTTCCEEEEEEEEEEECEETTSSSSEEEEEEECCBCSCCCCTTCEEEEE-EEEEE-TTEEEEEE
T ss_pred             HhccccCCC----CCCCCCCcEEEEEeeceeecccccCCcceEEEEEecCCCCCCCCCCCEEEEE-EEEEe-CCeEEecC
Confidence            579999988    8999999999999998774             34567774 78899999986 99998 99999974


Q ss_pred             ccCCCCeEEeeCCC---cccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCC-CCCCCCeEEEEEEEeeeeeccchhhc
Q psy5048          73 HDRDQPFTFTLGVG---QVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGN-VIPGGLSAVRQSEHSELEISTKFFLE  148 (319)
Q Consensus        73 ~~~~~p~~f~lG~~---~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~-~Ip~~~~l~feVeL~~v~~~~~~~~~  148 (319)
                           ++.|.+|.|   .+++||+.|+..|+.||++.|.++|.++||..|... .|||++++.|+++|.++....+ .|.
T Consensus       185 -----~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~~-~~~  258 (457)
T 1kt0_A          185 -----DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAKE-SWE  258 (457)
T ss_dssp             -----EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECCCC-GGG
T ss_pred             -----ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccCcc-hhh
Confidence                 599999977   489999999999999999999999999999999754 4999999999999999998764 588


Q ss_pred             cCccccchhhhhhhhcCCcccccchHHHHHHHH--hhhhhccc--CCc-c----hhHHHHHHHhhHHHHHHhcccchhHh
Q psy5048         149 LIPNKFLHWDRRFTQKGPMAKNREHIAHRARRD--RGKRRIQS--FKP-H----RAESEKLYAHCSSAYALLVKKTPSIH  219 (319)
Q Consensus       149 m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~--~~k~~~~~--~k~-~----~~~~~~l~~~~~~~~~~~~~~~~a~~  219 (319)
                      +..+++...+......|+.++..++|..+...-  ........  +.. .    ......++.++-.|+..+.++..|+.
T Consensus       259 ~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~  338 (457)
T 1kt0_A          259 MDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVE  338 (457)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence            888888889999999999999888886544311  11111111  000 0    01112333333447788899999999


Q ss_pred             HHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHHHHHHHHh
Q psy5048         220 NCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFF  291 (319)
Q Consensus       220 ~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~~y~~  291 (319)
                      .|+++|+.+|       +|++||||||+++..+++++        |++++|+|..+...|..+..+++++.++++++|++
T Consensus       339 ~~~~al~~~p-------~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~  411 (457)
T 1kt0_A          339 CCDKALGLDS-------ANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYAN  411 (457)
T ss_dssp             HHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCC-------ccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999       99999999999888888886        99999999999999999999999999999999999


Q ss_pred             cccCCCCCCch
Q psy5048         292 LFYNMSSPLNK  302 (319)
Q Consensus       292 mF~~~~~~~~~  302 (319)
                      ||.++.....+
T Consensus       412 ~f~k~~~~d~~  422 (457)
T 1kt0_A          412 MFKKFAEQDAK  422 (457)
T ss_dssp             C----------
T ss_pred             HHhhhhhcccc
Confidence            99998876655

>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A

Probab=99.95  E-value=1.6e-27  Score=224.79  Aligned_cols=255  Identities=13%  Similarity=0.141  Sum_probs=206.6

Q ss_pred             cccceEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCc---ccccHhHhhhccccCcEEE
Q psy5048          31 SPYSLSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQ---VIKGWDQGLTEMCVGEKRK  106 (319)
Q Consensus        31 d~~lv~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~---~i~Gle~al~~Mk~GE~~~  106 (319)
                      ....|.+.++++|.|. .|..++.|+|| |++++ +|++||++     |+.|.+|.|.   +++||++||.+|++||++.
T Consensus        23 ~~~~~~~~~~~~g~g~~~p~~~~~v~v~-y~g~~-~g~~fd~~-----~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~   95 (336)
T 1p5q_A           23 EDGGIIRRIQTRGEGYAKPNEGAIVEVA-LEGYY-KDKLFDQR-----ELRFEIGEGENLDLPYGLERAIQRMEKGEHSI   95 (336)
T ss_dssp             CTTSEEEEEEECCCCSCCCCTTCEEEEE-EEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEE
T ss_pred             CCCcEEEEEEeCCCCCCCCCCCCeEEEE-EEEEE-CCEEEecC-----CeEEEeCCCCccccchHHHHHHhcCCCCCeEE
Confidence            3445677889999997 79999999986 99998 99999997     8999999886   5899999999999999999


Q ss_pred             EEeCCCCCCCCCCCCC-CCCCCCeEEEEEEEeeeeeccchhhccCccccchhhhhhhhcCCcccccchHHHHHHHH--hh
Q psy5048         107 LTIPPALAYGDRGAGN-VIPGGLSAVRQSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRD--RG  183 (319)
Q Consensus       107 v~i~p~~ayG~~g~~~-~Ip~~~~l~feVeL~~v~~~~~~~~~m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~--~~  183 (319)
                      |.|+|.++||..|... .||+++++.|+++|.+++...+ .+.+..+.+...+......|+.++..+++..+...-  ..
T Consensus        96 l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~-~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al  174 (336)
T 1p5q_A           96 VYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKE-SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIV  174 (336)
T ss_dssp             EEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECCCC-GGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             EEECCccccCcCCCCccCCCCCCeEEEEEEEeecccccc-hhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence            9999999999999775 4999999999999999997664 477777777778888889999998888886543311  11


Q ss_pred             hhhccc--CCcc-hhHH----HHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc
Q psy5048         184 KRRIQS--FKPH-RAES----EKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL  256 (319)
Q Consensus       184 k~~~~~--~k~~-~~~~----~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~  256 (319)
                      ......  .... ....    ...+.++-.++..+.++..|+..|..+++.+|       +|++|||++|..+..+++++
T Consensus       175 ~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p-------~~~~a~~~lg~~~~~~g~~~  247 (336)
T 1p5q_A          175 SWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDS-------NNEKGLSRRGEAHLAVNDFE  247 (336)
T ss_dssp             HHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHH
T ss_pred             HHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHCCCHH
Confidence            111111  0000 0011    12333333466778999999999999999999       99999999999888888886


Q ss_pred             --------cccCCCChhhHHHHHHHHHHHHhHhHHHHHHHHHhcccCCCCCC
Q psy5048         257 --------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFFLFYNMSSPL  300 (319)
Q Consensus       257 --------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~~y~~mF~~~~~~~  300 (319)
                              |++++|++..+...|..+..++.++.+.++++|++||.+++...
T Consensus       248 ~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  299 (336)
T 1p5q_A          248 LARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEE  299 (336)
T ss_dssp             HHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence                    89999999999999999999999999999999999998755433

>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}

Probab=99.91  E-value=3.3e-24  Score=186.61  Aligned_cols=131  Identities=15%  Similarity=0.162  Sum_probs=106.2

Q ss_pred             CeeecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEe-CCcEEeeeccCCCCeEEeeCCC-cccccHhHhhhccccCcE
Q psy5048          27 TLSLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFK-LTLVAMRIHDRDQPFTFTLGVG-QVIKGWDQGLTEMCVGEK  104 (319)
Q Consensus        27 tl~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~-dg~v~d~s~~~~~p~~f~lG~~-~~i~Gle~al~~Mk~GE~  104 (319)
                      ........+.+.+++.|.|..|..++.|+++ |++++. ||++|++++..+.|+.|.+|.+ ++|+||+++|.+|++|++
T Consensus        43 ~~~~~~~gl~~~vl~~G~G~~~~~Gd~V~v~-Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~  121 (180)
T 2f4e_A           43 EAEVLDEKVSKQIIKEGHGSKPSKYSTCFLH-YRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGER  121 (180)
T ss_dssp             CCEEEETTEEEEEEECCBSCCBCTTCEEEEE-EEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHTTCCBTCE
T ss_pred             CcEECCCceEEEEEeCCCCCCCCCCCEEEEE-EEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHHhCCCCCCE
Confidence            3456667788999999999999999999986 999998 5999999988888999999999 999999999999999999


Q ss_pred             EEEEeCCCCCCCCCCC--CCCCCCCCeEEEEEEEeeeeeccc--hhhccCccccchhh
Q psy5048         105 RKLTIPPALAYGDRGA--GNVIPGGLSAVRQSEHSELEISTK--FFLELIPNKFLHWD  158 (319)
Q Consensus       105 ~~v~i~p~~ayG~~g~--~~~Ip~~~~l~feVeL~~v~~~~~--~~~~m~~eek~~~a  158 (319)
                      +.|+|||+++||..+.  .+.||||++|+|+|+|++|..+++  ..|+|+.+|+++.|
T Consensus       122 ~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~~A  179 (180)
T 2f4e_A          122 ALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAA  179 (180)
T ss_dssp             EEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCCC---------------
T ss_pred             EEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHhhc
Confidence            9999999999999986  456999999999999999997663  47999999999876

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=99.91  E-value=3e-24  Score=205.49  Aligned_cols=134  Identities=23%  Similarity=0.370  Sum_probs=119.1

Q ss_pred             cccCCCCCCC-CCCCCCCCCCCeeecccceEEE--------------EeecCcC-CCCCCCCcEEEEEEEEEEeCCcEEe
Q psy5048           7 LPFGENRNPF-YKTPCIRPRSTLSLSPYSLSLI--------------LPRRAEN-LKPYVNVKICVSSFKPTFKLTLVAM   70 (319)
Q Consensus         7 ~~~g~~g~~~-~~~p~Ipp~atl~~d~~lv~~~--------------i~~~G~G-~~p~~~~~v~v~~y~~~l~dg~v~d   70 (319)
                      ++||+.|+|. ...+.||||++|.|++++++|.              ++++|.| ..|..++.|++| |++++.||++|+
T Consensus       203 ~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~-y~g~l~dG~~fd  281 (356)
T 3jxv_A          203 YGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVK-ITGKLQDGTVFL  281 (356)
T ss_dssp             GTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEESTTCCEEEEEEECCBSSCCCCTTCEEEEE-EEEEESSSCEEE
T ss_pred             hhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccccccccceeEEeeecccccCCCCCCCEEEEE-EEEEECCCCEEe
Confidence            5899999984 3457899999999999999984              5677888 689899999986 999999999999


Q ss_pred             eec-cCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCC--CCCCCCCCeEEEEEEEeeeee
Q psy5048          71 RIH-DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGA--GNVIPGGLSAVRQSEHSELEI  141 (319)
Q Consensus        71 ~s~-~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~--~~~Ip~~~~l~feVeL~~v~~  141 (319)
                      ++. ..++|+.|.+|.+++|+||+++|.+|++||++.|+|||+++||..+.  ...||||++|+|+|+|++|++
T Consensus       282 ~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~~~~  355 (356)
T 3jxv_A          282 KKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVK  355 (356)
T ss_dssp             EESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTSCEESSSEECTTCCEEEEEEEEEEEC
T ss_pred             eccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEEEChHHccCCCCcCCCCcCCcCCeEEEEEEEEEEEc
Confidence            984 55789999999999999999999999999999999999999999884  356999999999999999974

>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1

Probab=99.90  E-value=6.7e-23  Score=164.89  Aligned_cols=109  Identities=31%  Similarity=0.487  Sum_probs=100.8

Q ss_pred             cccceEEEEeecCcCCC-CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEe
Q psy5048          31 SPYSLSLILPRRAENLK-PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTI  109 (319)
Q Consensus        31 d~~lv~~~i~~~G~G~~-p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i  109 (319)
                      ....+.+.++++|.|.. |..++.|+++ |++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++||+++|.|
T Consensus         4 ~~~g~~~~~~~~G~g~~~~~~gd~V~v~-y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~i   82 (113)
T 1yat_A            4 IEGNVKIDRISPGDGATFPKTGDLVTIH-YTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTI   82 (113)
T ss_dssp             CGGGCEEEEEECCCSSCCCCTTCEEEEE-EEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEE
T ss_pred             CCCCeEEEEEECCCCcccCCCCCEEEEE-EEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEEE
Confidence            34557788899999988 9999999986 999999999999998877899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048         110 PPALAYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       110 ~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      ||+++||..+.++.||||++|+|+|+|++|+
T Consensus        83 p~~~ayG~~~~~~~Ip~~~~l~f~vel~~ik  113 (113)
T 1yat_A           83 PGPYAYGPRGFPGLIPPNSTLVFDVELLKVN  113 (113)
T ss_dssp             CGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred             CHHHCcCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence            9999999999888899999999999999874

>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}

Probab=99.89  E-value=3.2e-24  Score=183.65  Aligned_cols=111  Identities=12%  Similarity=0.080  Sum_probs=94.3

Q ss_pred             ccceEEEEeecCcCCCCC--CCCcEEEEEEEEEEeC--CcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEE
Q psy5048          32 PYSLSLILPRRAENLKPY--VNVKICVSSFKPTFKL--TLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKL  107 (319)
Q Consensus        32 ~~lv~~~i~~~G~G~~p~--~~~~v~v~~y~~~l~d--g~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v  107 (319)
                      ...|.+.++++|.|..|.  .|+.|+|| |++++.|  |++||||+.+++|++|.+|.+++|+||++||.+|++||+++|
T Consensus         9 ~~Gv~~~vl~~G~G~~p~~~~G~~V~vh-Y~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~~~   87 (165)
T 2lkn_A            9 EDGIQKRVIQEGRGELPDFQDGTKATFH-YRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEIAQF   87 (165)
T ss_dssp             TTSCCCCEEECCSSCCCCCCTTCEEEEE-CEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCEEEE
T ss_pred             CCCeEEEEEECCcCCCCCCCCCCEEEEE-EEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCceEEE
Confidence            345667789999998764  67888886 9999965  999999999999999999999999999999999999999999


Q ss_pred             EeCCCCCCCCC-----------C--------------------------CCCCCCCCCeEEEEEEEeeeeecc
Q psy5048         108 TIPPALAYGDR-----------G--------------------------AGNVIPGGLSAVRQSEHSELEIST  143 (319)
Q Consensus       108 ~i~p~~ayG~~-----------g--------------------------~~~~Ip~~~~l~feVeL~~v~~~~  143 (319)
                      +|||+++||+.           +                          ...+|+++++|+|+|||++|+.+.
T Consensus        88 ~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~  160 (165)
T 2lkn_A           88 LCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPG  160 (165)
T ss_dssp             ECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTT
T ss_pred             EECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCc
Confidence            99999999931           0                          011245668899999999999765

>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...

Probab=99.89  E-value=4.5e-23  Score=164.17  Aligned_cols=105  Identities=30%  Similarity=0.516  Sum_probs=97.8

Q ss_pred             eEEEEeecCcCCC-CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCC
Q psy5048          35 LSLILPRRAENLK-PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPAL  113 (319)
Q Consensus        35 v~~~i~~~G~G~~-p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~  113 (319)
                      |.+.++++|+|.. |..++.|+++ |++++.||++|++++..++|++|.+|.+++++||+++|.+|++||+++|.|||++
T Consensus         2 l~~~~~~~G~g~~~~~~gd~V~v~-y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~~~   80 (107)
T 2ppn_A            2 VQVETISPGDGRTFPKRGQTCVVH-YTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY   80 (107)
T ss_dssp             EEEEEEECCCSSCCCCTTCEEEEE-EEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred             cEEEEEECcCCCcCCCCCCEEEEE-EEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECHHH
Confidence            5677899999987 9999999986 9999999999999987678999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048         114 AYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       114 ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      +||..+.++.||||++|+|+|+|++|+
T Consensus        81 ayG~~~~~~~Ip~~~~l~f~v~l~~v~  107 (107)
T 2ppn_A           81 AYGATGHPGIIPPHATLVFDVELLKLE  107 (107)
T ss_dssp             TTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred             ccCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence            999999877899999999999999874

>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A

Probab=99.89  E-value=6.3e-23  Score=172.32  Aligned_cols=108  Identities=31%  Similarity=0.473  Sum_probs=100.5

Q ss_pred             cceEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCC
Q psy5048          33 YSLSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPP  111 (319)
Q Consensus        33 ~lv~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p  111 (319)
                      ..+.+.++++|.|. .|..++.|++| |++++.||++|++++.++.|+.|.+|.+++|+||+++|.+|++||++.|+|||
T Consensus        35 ~gv~~~i~~~G~G~~~p~~gd~V~v~-Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ipp  113 (144)
T 3o5e_A           35 RGVLKIVKRVGNGEETPMIGDKVYVH-YKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKP  113 (144)
T ss_dssp             SSEEEEEEECCBSSCCCCTTCEEEEE-EEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEECG
T ss_pred             CeEEEEEEECCCCCccCCCCCEEEEE-EEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEECh
Confidence            34667789999997 78899999986 99999999999999988889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCeEEEEEEEeeeee
Q psy5048         112 ALAYGDRGAGNVIPGGLSAVRQSEHSELEI  141 (319)
Q Consensus       112 ~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~  141 (319)
                      +++||..+.++.||||++|+|+|+|++|+.
T Consensus       114 ~~aYG~~g~~~~Ipp~~~L~f~VeL~~ikg  143 (144)
T 3o5e_A          114 EYAYGSAGSLPKIPSNATLFFEIELLDFKG  143 (144)
T ss_dssp             GGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred             HHCcCCCCCCCCcCCCCeEEEEEEEEEecC
Confidence            999999998888999999999999999874

>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*

Probab=99.89  E-value=8.3e-23  Score=165.73  Aligned_cols=108  Identities=27%  Similarity=0.480  Sum_probs=97.8

Q ss_pred             ccceEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccC-------CCCeEEeeCCCcccccHhHhhhccccCc
Q psy5048          32 PYSLSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDR-------DQPFTFTLGVGQVIKGWDQGLTEMCVGE  103 (319)
Q Consensus        32 ~~lv~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~-------~~p~~f~lG~~~~i~Gle~al~~Mk~GE  103 (319)
                      +..+.+.++++|+|. .|..++.|+++ |++++.||++|++++..       +.|+.|.+|.+++|+||+++|.+|++||
T Consensus         3 p~g~~~~il~~G~g~~~p~~gd~V~v~-Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge   81 (119)
T 3kz7_A            3 PPKYTKSILKKGDKTNFPKKGDVVHCW-YTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE   81 (119)
T ss_dssp             SCSEEEEEEECCCSSCCCCTTCEEEEE-EEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred             CCccEEEEEEcCCCCCcCCCCCEEEEE-EEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence            345677889999996 58999999986 99999999999999753       4799999999999999999999999999


Q ss_pred             EEEEEeCCCCCCCCCCCCC-CCCCCCeEEEEEEEeeee
Q psy5048         104 KRKLTIPPALAYGDRGAGN-VIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       104 ~~~v~i~p~~ayG~~g~~~-~Ip~~~~l~feVeL~~v~  140 (319)
                      ++.|+|||+++||..+.++ .||||++|+|+|+|++|+
T Consensus        82 ~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i~  119 (119)
T 3kz7_A           82 KARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID  119 (119)
T ss_dssp             EEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEEC
T ss_pred             EEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEeC
Confidence            9999999999999999865 699999999999999974

>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*

Probab=99.89  E-value=1.1e-22  Score=168.55  Aligned_cols=110  Identities=35%  Similarity=0.537  Sum_probs=101.5

Q ss_pred             eecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEE
Q psy5048          29 SLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLT  108 (319)
Q Consensus        29 ~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~  108 (319)
                      .-....+.+.++++|.|..|..++.|+++ |++++.||++||+++..++|+.|.+|.+.+|+||+++|.+|++||+++|+
T Consensus        24 ~~~~~gl~~~~l~~G~G~~~~~gd~V~v~-Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v~  102 (133)
T 2y78_A           24 VTTESGLKYEDLTEGSGAEARAGQTVSVH-YTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLT  102 (133)
T ss_dssp             EECTTSCEEEEEECCSSCBCCTTSEEEEE-EEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEEE
T ss_pred             EECCCCEEEEEEEcCCCCCCCCCCEEEEE-EEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEEE
Confidence            44556677888999999999999999986 99999999999999877789999999999999999999999999999999


Q ss_pred             eCCCCCCCCCCCCCCCCCCCeEEEEEEEeee
Q psy5048         109 IPPALAYGDRGAGNVIPGGLSAVRQSEHSEL  139 (319)
Q Consensus       109 i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v  139 (319)
                      |||+++||..+.++.||||++|+|+|+|++|
T Consensus       103 ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I  133 (133)
T 2y78_A          103 IPPQLGYGARGAGGVIPPNATLVFEVELLDV  133 (133)
T ss_dssp             ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred             ECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence            9999999999988889999999999999975

>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A

Probab=99.89  E-value=8.7e-23  Score=168.01  Aligned_cols=107  Identities=32%  Similarity=0.483  Sum_probs=99.7

Q ss_pred             ceEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCC
Q psy5048          34 SLSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPA  112 (319)
Q Consensus        34 lv~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~  112 (319)
                      .+.+.++++|.|. .|..++.|+++ |++++.||++|++++..+.|+.|.+|.+++|+||+++|.+|++||+++|+|||+
T Consensus        20 gv~~~i~~~G~G~~~p~~gd~V~v~-Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ip~~   98 (128)
T 3o5q_A           20 GVLKIVKRVGNGEETPMIGDKVYVH-YKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPE   98 (128)
T ss_dssp             SEEEEEEECCSSSCCCCTTCEEEEE-EEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGG
T ss_pred             CEEEEEEECCCCCccCCCCCEEEEE-EEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCCEEEEEEChH
Confidence            4667789999997 68899999886 999999999999998878899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCeEEEEEEEeeeee
Q psy5048         113 LAYGDRGAGNVIPGGLSAVRQSEHSELEI  141 (319)
Q Consensus       113 ~ayG~~g~~~~Ip~~~~l~feVeL~~v~~  141 (319)
                      ++||..+.++.||||++|+|+|+|++|+.
T Consensus        99 ~aYG~~g~~~~Ip~~~~l~f~vel~~i~~  127 (128)
T 3o5q_A           99 YAYGSAGSLPKIPSNATLFFEIELLDFKG  127 (128)
T ss_dssp             GTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred             HcCCCCCCCCCcCCCCEEEEEEEEEEecC
Confidence            99999998888999999999999999874

>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1

Probab=99.89  E-value=5.7e-23  Score=176.64  Aligned_cols=123  Identities=25%  Similarity=0.320  Sum_probs=108.7

Q ss_pred             eecccceEEEEeecCcCCC-CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEE
Q psy5048          29 SLSPYSLSLILPRRAENLK-PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKL  107 (319)
Q Consensus        29 ~~d~~lv~~~i~~~G~G~~-p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v  107 (319)
                      ......+.+.+++.|.|.. |..++.|+++ |++++.||++||+++.++.|+.|.+  +++|+||+++|.+|++|++++|
T Consensus        33 ~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~-Y~g~l~dG~~fdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~~  109 (167)
T 1jvw_A           33 VKLPSGLVFQRIARGSGKRAPAIDDKCEVH-YTGRLRDGTVFDSSRERGKPTTFRP--NEVIKGWTEALQLMREGDRWRL  109 (167)
T ss_dssp             EECTTSCEEEEEECCCCSBCCCTTCCEEEE-EEEECTTSCEEEEHHHHTSCEEECG--GGSCHHHHHHHTTCCTTCEEEE
T ss_pred             EECCCCEEEEEEEcCCCCcCCCCCCEEEEE-EEEEECCCCEEeeccccCCCEEEEe--CchhHHHHHHHcCCCCCCEEEE
Confidence            4456678888999999998 9999999996 9999999999999988778999999  5899999999999999999999


Q ss_pred             EeCCCCCCCCCCCCCCCCCCCeEEEEEEEeeeeeccchhhccCccccchh
Q psy5048         108 TIPPALAYGDRGAGNVIPGGLSAVRQSEHSELEISTKFFLELIPNKFLHW  157 (319)
Q Consensus       108 ~i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~~~~~~~~m~~eek~~~  157 (319)
                      +|||+++||..+.++.||||++|+|+|+|++|.+.+   |.++.+|..+.
T Consensus       110 ~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~~~---~~~~~~e~~~~  156 (167)
T 1jvw_A          110 FIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKDGG---KGRTAEEVDEI  156 (167)
T ss_dssp             EECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGGGC---CSCBHHHHHHH
T ss_pred             EECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEcCC---CCCCHHHHHHH
Confidence            999999999999888899999999999999999643   55666554443

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=99.88  E-value=1.7e-22  Score=187.29  Aligned_cols=129  Identities=20%  Similarity=0.353  Sum_probs=113.5

Q ss_pred             cccCCCCCCCCCCCCCCCCCCeeecccceEEE---------------EeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEe
Q psy5048           7 LPFGENRNPFYKTPCIRPRSTLSLSPYSLSLI---------------LPRRAENL-KPYVNVKICVSSFKPTFKLTLVAM   70 (319)
Q Consensus         7 ~~~g~~g~~~~~~p~Ipp~atl~~d~~lv~~~---------------i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d   70 (319)
                      ++||..|+|    |.||||++|.|+++++++.               ++++|.|. .|..++.|+++ |++++ ||++|+
T Consensus       131 ~aYG~~g~~----~~Ip~~~~lvf~Vel~~i~~~~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~-y~g~~-dG~~fd  204 (280)
T 1q1c_A          131 YAYGSAGSP----PKIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVA-LEGYY-KDKLFD  204 (280)
T ss_dssp             GTTTTTCBT----TTBCTTCCEEEEEEEEEEECEECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEE-EEEEE-TTEEEE
T ss_pred             HhCCCcCcc----CCCCCCCcEEEEEEeeeecccccccccccceeEEeeecccccccccCCceEEEE-EEEEe-CCEEEe
Confidence            579999987    7999999999999988764               56778887 57888888886 99998 999999


Q ss_pred             eeccCCCCeEEeeCCCc---ccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCC-CCCCCeEEEEEEEeeeeeccchh
Q psy5048          71 RIHDRDQPFTFTLGVGQ---VIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV-IPGGLSAVRQSEHSELEISTKFF  146 (319)
Q Consensus        71 ~s~~~~~p~~f~lG~~~---~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~-Ip~~~~l~feVeL~~v~~~~~~~  146 (319)
                      ++     |+.|.+|.+.   +|+||+++|.+|++||++.|+|||+++||..+.+.+ ||||++++|+|+|++|+.+++. 
T Consensus       205 ~~-----~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~~~~~~-  278 (280)
T 1q1c_A          205 QR-----ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKES-  278 (280)
T ss_dssp             EE-----EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEECCCC--
T ss_pred             cC-----CeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEeCCCCC-
Confidence            73     8999999987   599999999999999999999999999999987664 9999999999999999977643 


Q ss_pred             h
Q psy5048         147 L  147 (319)
Q Consensus       147 ~  147 (319)
                      |
T Consensus       279 W  279 (280)
T 1q1c_A          279 W  279 (280)
T ss_dssp             -
T ss_pred             C
Confidence            5

>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}

Probab=99.88  E-value=1.4e-22  Score=167.35  Aligned_cols=100  Identities=38%  Similarity=0.610  Sum_probs=94.4

Q ss_pred             EeecCcCCC-CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCC
Q psy5048          39 LPRRAENLK-PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGD  117 (319)
Q Consensus        39 i~~~G~G~~-p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~  117 (319)
                      ++++|+|.. |..++.|+++ |++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++||++.|.|||+++||.
T Consensus        30 ~l~~G~G~~~~~~gd~V~v~-Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ip~~~aYG~  108 (130)
T 2lgo_A           30 VLTPGDGVTKPQAGKKVTVH-YDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFTIPYQLAYGE  108 (130)
T ss_dssp             EEECCCSSCCCCTTSEEEEE-EEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEEEEEEECTTTSTTT
T ss_pred             EEeccCCCccCCCCCEEEEE-EEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECcHHHCCC
Confidence            688999987 9999999986 99998899999999887789999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCeEEEEEEEeee
Q psy5048         118 RGAGNVIPGGLSAVRQSEHSEL  139 (319)
Q Consensus       118 ~g~~~~Ip~~~~l~feVeL~~v  139 (319)
                      .+.++.||||++|+|+|+|++|
T Consensus       109 ~~~~~~Ip~~~~l~f~VeL~~i  130 (130)
T 2lgo_A          109 RGYPPVIPPKATLVFEVELLAV  130 (130)
T ss_dssp             TCCSTTSCSSCCEEEEEEEEEC
T ss_pred             CCCCCCcCCCCeEEEEEEEEEC
Confidence            9988889999999999999875

>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*

Probab=99.88  E-value=4e-22  Score=177.37  Aligned_cols=115  Identities=34%  Similarity=0.507  Sum_probs=107.5

Q ss_pred             CCCCeeecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCc
Q psy5048          24 PRSTLSLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGE  103 (319)
Q Consensus        24 p~atl~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE  103 (319)
                      .+++.......+.+.+++.|+|..|..++.|+++ |++++.||++|++++..+.|+.|.+|.+.+|+||+++|.+|++||
T Consensus        95 Gg~t~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~-Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge  173 (209)
T 3uf8_A           95 GGSTVVTTESGLKYEDLTEGSGAEARAGQTVSVH-YTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGG  173 (209)
T ss_dssp             TCCCCEECTTSCEEEEEECCCSCBCCTTCEEEEE-EEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTC
T ss_pred             ccccccCCCCceEEEEEEcCCCCcCCCCCEEEEE-EEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCC
Confidence            4566677778888999999999999999999986 999999999999999888899999999999999999999999999


Q ss_pred             EEEEEeCCCCCCCCCCCCCCCCCCCeEEEEEEEeee
Q psy5048         104 KRKLTIPPALAYGDRGAGNVIPGGLSAVRQSEHSEL  139 (319)
Q Consensus       104 ~~~v~i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v  139 (319)
                      ++.|.|||++|||..+.++.||||++|+|+|+|++|
T Consensus       174 ~~~v~Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I  209 (209)
T 3uf8_A          174 VRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV  209 (209)
T ss_dssp             EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred             EEEEEECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence            999999999999999998889999999999999985

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1

Probab=99.88  E-value=3.8e-22  Score=165.76  Aligned_cols=108  Identities=31%  Similarity=0.512  Sum_probs=100.2

Q ss_pred             cceEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCC
Q psy5048          33 YSLSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPP  111 (319)
Q Consensus        33 ~lv~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p  111 (319)
                      ..+.+.++++|.|. .|..++.|+++ |++++.||++|++++.++.|+.|.+|.+++|+||+++|.+|++||++.|+|||
T Consensus        14 ~gl~~~~l~~G~g~~~~~~gd~V~v~-Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ip~   92 (135)
T 1r9h_A           14 GGVLKLIKKEGQGVVKPTTGTTVKVH-YVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRS   92 (135)
T ss_dssp             SSEEEEEEECCBSSCCCCTTCEEEEE-EEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEECG
T ss_pred             CcEEEEEEEccCCCcCCCCCCEEEEE-EEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEEECh
Confidence            35677889999997 68888989886 99999899999999876789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCeEEEEEEEeeeee
Q psy5048         112 ALAYGDRGAGNVIPGGLSAVRQSEHSELEI  141 (319)
Q Consensus       112 ~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~  141 (319)
                      +++||..+.++.||++++|+|+|+|++|..
T Consensus        93 ~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~  122 (135)
T 1r9h_A           93 DYGYGDAGSPPKIPGGATLIFEVELFEWSA  122 (135)
T ss_dssp             GGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred             HHcCCCCCCCCCcCcCCcEEEEEEEEEeec
Confidence            999999998888999999999999999985

>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}

Probab=99.87  E-value=5e-22  Score=162.66  Aligned_cols=109  Identities=34%  Similarity=0.540  Sum_probs=98.3

Q ss_pred             ccceEEEEeecCc--CCCCCCCCcEEEEEEEEEEe-CCcEEeeecc--CCCCeEEeeCCCcccccHhHhhhccccCcEEE
Q psy5048          32 PYSLSLILPRRAE--NLKPYVNVKICVSSFKPTFK-LTLVAMRIHD--RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRK  106 (319)
Q Consensus        32 ~~lv~~~i~~~G~--G~~p~~~~~v~v~~y~~~l~-dg~v~d~s~~--~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~  106 (319)
                      ...+.+.+++.|.  |..|..++.|+++ |++++. ||++|++++.  .+.|+.|.+|.+++|+||+++|.+|++||++.
T Consensus        11 ~~gl~~~~l~~g~~~g~~~~~gd~V~v~-Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~~~   89 (125)
T 4dip_A           11 EPEVKIEVLQKPFICHRKTKGGDLMLVH-YEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEKRK   89 (125)
T ss_dssp             CCCCEEEEEECCSCCSCCCCTTCEEEEE-EEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTCEEE
T ss_pred             CCCeEEEEEEcCCCCCCcCCCCCEEEEE-EEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCCEEE
Confidence            3456677788888  7889999999986 999998 9999999974  46799999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCCCCCCCCCCCeEEEEEEEeeeeec
Q psy5048         107 LTIPPALAYGDRGAGNVIPGGLSAVRQSEHSELEIS  142 (319)
Q Consensus       107 v~i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~~  142 (319)
                      |.|||++|||..+.+ .||||++|+|+|+|++|+..
T Consensus        90 ~~ip~~~aYG~~g~~-~Ip~~~~l~f~vel~~i~~~  124 (125)
T 4dip_A           90 LIIPPALGYGKEGKG-KIPPESTLIFNIDLLEIRNG  124 (125)
T ss_dssp             EEECGGGTTTTTCBT-TBCTTCCEEEEEEEEEEECC
T ss_pred             EEEChHHhcCCCCCC-CCCCCCeEEEEEEEEEEEcC
Confidence            999999999999966 79999999999999999853

>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A

Probab=99.87  E-value=7.3e-22  Score=162.58  Aligned_cols=106  Identities=28%  Similarity=0.438  Sum_probs=96.1

Q ss_pred             eEEEEeecC---cCCCCCCCCcEEEEEEEEEE-eCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeC
Q psy5048          35 LSLILPRRA---ENLKPYVNVKICVSSFKPTF-KLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIP  110 (319)
Q Consensus        35 v~~~i~~~G---~G~~p~~~~~v~v~~y~~~l-~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~  110 (319)
                      +...+++.|   .|..|..++.|+++ |++++ .||++|++++.++.|+.|.+|.+.+|+||+++|.+|++||++.|+||
T Consensus        18 ~~~~il~~G~~g~g~~~~~gd~V~v~-Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~~Ge~~~v~ip   96 (129)
T 2vn1_A           18 VIKTILKKGDEGEENIPKKGNEVTVH-YVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVRIE   96 (129)
T ss_dssp             EEEEEEECCCCSGGGSCCTTCEEEEE-EEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred             EEEEEEeCCCCCCCCcCCCCCEEEEE-EEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCCCCCEEEEEEC
Confidence            334567754   56789999999986 99998 89999999988778999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCeEEEEEEEeeeee
Q psy5048         111 PALAYGDRGAGNVIPGGLSAVRQSEHSELEI  141 (319)
Q Consensus       111 p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~  141 (319)
                      |+++||..+.++.||||++|+|+|+|++|..
T Consensus        97 ~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~  127 (129)
T 2vn1_A           97 SMYGYGDEGCGESIPGNSVLLFEIELLSFRE  127 (129)
T ss_dssp             GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred             hHHcCCCCCCCCCcCCCCeEEEEEEEEEEec
Confidence            9999999998778999999999999999985

>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}

Probab=99.87  E-value=1.8e-22  Score=167.54  Aligned_cols=109  Identities=18%  Similarity=0.199  Sum_probs=93.4

Q ss_pred             cccceEEEEeecCcCCCCCCCCcEEEEEEEEEEe-CCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEe
Q psy5048          31 SPYSLSLILPRRAENLKPYVNVKICVSSFKPTFK-LTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTI  109 (319)
Q Consensus        31 d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~-dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i  109 (319)
                      ....+.+.++++|.|..+..++.|+++ |++++. ||++|++++..+.|+.|.+|.+.+|+||+++|.+|++||++.|+|
T Consensus        24 ~~~gl~~~vl~~G~g~~~~~gd~V~v~-Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~v~i  102 (134)
T 3b7x_A           24 GDRGVLKDVIREGAGDLVAPDASVLVK-YSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLF  102 (134)
T ss_dssp             SSSSEEEEEEECCEEEECCTTCEEEEE-EEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHHTCEETCEEEEEE
T ss_pred             CCCCEEEEEEEcCCCCCCCCCCEEEEE-EEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhCCCCCCEEEEEE
Confidence            345677888999999988888888886 999988 599999998777899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048         110 PPALAYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       110 ~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      ||+++||..+.++.||||++|+|+|+|++|+
T Consensus       103 p~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~  133 (134)
T 3b7x_A          103 KPNYAYGTLGCPPLIPPNTTVLFEIELLDFL  133 (134)
T ss_dssp             CGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred             CHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence            9999999999888899999999999999986

>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A

Probab=99.87  E-value=3.1e-22  Score=191.46  Aligned_cols=127  Identities=22%  Similarity=0.348  Sum_probs=90.7

Q ss_pred             cccCCCCCCCCCCCCCCCCCCeeecccceEEE--------------EeecCcC-CCCCCCCcEEEEEEEEEEeCCcEEee
Q psy5048           7 LPFGENRNPFYKTPCIRPRSTLSLSPYSLSLI--------------LPRRAEN-LKPYVNVKICVSSFKPTFKLTLVAMR   71 (319)
Q Consensus         7 ~~~g~~g~~~~~~p~Ipp~atl~~d~~lv~~~--------------i~~~G~G-~~p~~~~~v~v~~y~~~l~dg~v~d~   71 (319)
                      ++||+.|.+    |.||||++|.|++++++|.              ++++|.| .+|..++.|.+| |++++.||++|++
T Consensus        91 ~aYG~~g~~----~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~-y~g~l~dgt~~~~  165 (356)
T 3jxv_A           91 LAYGESGSP----PTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVK-YEARLEDGTVVSK  165 (356)
T ss_dssp             -------------------------------CCEEETTSSSSEEEEEEECCBSSCCCCTTCEEEEE-EEEEETTSCEEEE
T ss_pred             HhCCCCCCC----CCcCCCCEEEEEeeEEeeecccccccCceeEEEEEecCcccCCCCCCCEEEEE-EEEEECCCCEEec
Confidence            589999988    8999999999999999983              5677887 589999999996 9999999999998


Q ss_pred             eccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCC-----CCCCCCeEEEEEEEeeeeec
Q psy5048          72 IHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGN-----VIPGGLSAVRQSEHSELEIS  142 (319)
Q Consensus        72 s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~-----~Ip~~~~l~feVeL~~v~~~  142 (319)
                      +.    ++.|.+|.+.+++||+.+|.+|++||++.|+|+|+++||..|.+.     .|||+++|+|+|+|++|...
T Consensus       166 ~~----~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v  237 (356)
T 3jxv_A          166 SE----GVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTV  237 (356)
T ss_dssp             EE----EEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECE
T ss_pred             cC----CEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecc
Confidence            73    699999999999999999999999999999999999999998754     59999999999999999753

>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}

Probab=99.87  E-value=1.4e-21  Score=166.33  Aligned_cols=108  Identities=19%  Similarity=0.166  Sum_probs=97.5

Q ss_pred             ecccc-eEEEEeecCcCC--CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEE
Q psy5048          30 LSPYS-LSLILPRRAENL--KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRK  106 (319)
Q Consensus        30 ~d~~l-v~~~i~~~G~G~--~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~  106 (319)
                      ..... +.+.++++|.|.  .|..++.|+++ |++++.||++||++    .|++|.+|.+++|+||+++|.+|++||+++
T Consensus        39 ~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~-Y~g~l~dG~~fds~----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~  113 (157)
T 2jwx_A           39 ILGNGLLRKKTLVPGPPGSSRPVKGQVVTVH-LQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAM  113 (157)
T ss_dssp             SSSSSSEEEEEEECCSTTSCCCCTTEEEEEE-EEEECTTSCEEEEE----EEEEEETTTTSSCHHHHHHTTTSCTTCEEE
T ss_pred             ECCCCCEEEEEEEccCCCccCCCCCCEEEEE-EEEEECCCCEeecC----CCEEEEeCCCChhHHHHHHHcCCCCCCEEE
Confidence            33444 478899999997  88889988886 99999999999984    589999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCC-CCCCCCCCCeEEEEEEEeeeeec
Q psy5048         107 LTIPPALAYGDRG-AGNVIPGGLSAVRQSEHSELEIS  142 (319)
Q Consensus       107 v~i~p~~ayG~~g-~~~~Ip~~~~l~feVeL~~v~~~  142 (319)
                      |+|||+++||..+ ..+.||||++|+|+|+|++|...
T Consensus       114 v~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~  150 (157)
T 2jwx_A          114 VTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDL  150 (157)
T ss_dssp             EEECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEEC
T ss_pred             EEECchhcCCcccccCCCcCCCCeEEEEEEEEEEEcc
Confidence            9999999999999 66679999999999999999864

>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0

Probab=99.86  E-value=1.5e-21  Score=174.27  Aligned_cols=106  Identities=26%  Similarity=0.330  Sum_probs=99.1

Q ss_pred             eecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEE
Q psy5048          29 SLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLT  108 (319)
Q Consensus        29 ~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~  108 (319)
                      ......+.+.++++|+|..|..++.|+++ |++++.||++||+|   +.|++|.+|  ++|+||+++|.+|++|++++|+
T Consensus       113 ~~~~sGl~y~vl~~G~G~~p~~gd~V~V~-Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~  186 (219)
T 3oe2_A          113 KELADGILMTELTPGTGPKPDANGRVEVR-YVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSALQNMPTGAKWRLV  186 (219)
T ss_dssp             EECGGGCEEEEEECCCSCCCCTTSEEEEE-EEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEE
T ss_pred             EECCCCeEEEEEecCCCccCCCCCEEEEE-EEEEECCCCEeecc---CCcEEEEec--chhHHHHHHHhCCCCCCEEEEE
Confidence            45567788899999999999999999996 99999999999998   679999997  8999999999999999999999


Q ss_pred             eCCCCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048         109 IPPALAYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       109 i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      |||+++||..|.++.||||++|+|+|+|++|+
T Consensus       187 IPp~lAYG~~g~~~~IPpnstLvFeVeLl~Ik  218 (219)
T 3oe2_A          187 IPSDQAYGAEGAGDLIDPFTPLVFEIELIAVS  218 (219)
T ss_dssp             ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred             ECchhcCCCCCCCCCCCCCCeEEEEEEEEEEe
Confidence            99999999999988899999999999999986

>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A

Probab=99.86  E-value=3.6e-21  Score=188.84  Aligned_cols=110  Identities=31%  Similarity=0.466  Sum_probs=83.5

Q ss_pred             ccceEEEEeecCcCCC-CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeC
Q psy5048          32 PYSLSLILPRRAENLK-PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIP  110 (319)
Q Consensus        32 ~~lv~~~i~~~G~G~~-p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~  110 (319)
                      ...+.+.++++|.|.. |..|+.|++| |++++.||++|++|+..+.|+.|.+|.+.+|+||+++|.+|++||++.|+||
T Consensus        30 ~~g~~~~~~~~G~g~~~~~~gd~v~v~-y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i~  108 (457)
T 1kt0_A           30 DRGVLKIVKRVGNGEETPMIGDKVYVH-YKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCK  108 (457)
T ss_dssp             ---CEEEC--------CCCBTCEEEEE-EEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred             CCcEEEEEEECCCCCCCCCCCCEEEEE-EEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEEC
Confidence            4467788899999987 9999999996 9999989999999988888999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCeEEEEEEEeeeeec
Q psy5048         111 PALAYGDRGAGNVIPGGLSAVRQSEHSELEIS  142 (319)
Q Consensus       111 p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~~  142 (319)
                      |+++||..|.++.|||+++++|+|+|++|...
T Consensus       109 ~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~~  140 (457)
T 1kt0_A          109 PEYAYGSAGSLPKIPSNATLFFEIELLDFKGE  140 (457)
T ss_dssp             GGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE
T ss_pred             hHHhccccCCCCCCCCCCcEEEEEeeceeecc
Confidence            99999999988889999999999999999753

>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*

Probab=99.86  E-value=2.7e-21  Score=172.33  Aligned_cols=110  Identities=23%  Similarity=0.345  Sum_probs=101.6

Q ss_pred             eecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEE
Q psy5048          29 SLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLT  108 (319)
Q Consensus        29 ~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~  108 (319)
                      ...+..+.+.++++|.|..|..++.|++| |++++.||++||+++.++.|++|.+  +.+|+||+++|.+|++|++++|+
T Consensus       102 ~~~~sGl~y~vl~~G~G~~p~~gD~V~V~-Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~  178 (213)
T 1fd9_A          102 VVLPSGLQYKVINSGNGVKPGKSDTVTVE-YTGRLIDGTVFDSTEKTGKPATFQV--SQVIPGWTEALQLMPAGSTWEIY  178 (213)
T ss_dssp             EECTTSCEEEEEECCCSCCCCTTCEEEEE-EEEEETTSCEEEEHHHHCSCEEEEG--GGSCHHHHHHHTTCCTTCEEEEE
T ss_pred             EECCCccEEEEEecCCCccCCCCCEEEEE-EEEEECCCCEEeeccccCCCEEEEc--CchhhHHHHHHcCCCCCCEEEEE
Confidence            44566778888999999999999999996 9999999999999988788999999  58999999999999999999999


Q ss_pred             eCCCCCCCCCCCCCCCCCCCeEEEEEEEeeeee
Q psy5048         109 IPPALAYGDRGAGNVIPGGLSAVRQSEHSELEI  141 (319)
Q Consensus       109 i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~  141 (319)
                      |||+++||..+.++.||||++|+|+|+|++|.+
T Consensus       179 IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~~  211 (213)
T 1fd9_A          179 VPSGLAYGPRSVGGPIGPNETLIFKIHLISVKK  211 (213)
T ss_dssp             ECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEEC
T ss_pred             ECchhccCccCCCCCCCCCCeEEEEEEEEEEEc
Confidence            999999999998778999999999999999974

>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}

Probab=99.86  E-value=1.8e-21  Score=153.56  Aligned_cols=97  Identities=42%  Similarity=0.680  Sum_probs=90.0

Q ss_pred             CCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCC
Q psy5048          45 NLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI  124 (319)
Q Consensus        45 G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~I  124 (319)
                      |..|..++.|+++ |++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++||+++|+|||+++||..+.++.|
T Consensus         3 g~~~~~gd~V~v~-y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~I   81 (102)
T 2pbc_A            3 PIKSRKGDVLHMH-YTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKI   81 (102)
T ss_dssp             CCCCCTTCEEEEE-EEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTTB
T ss_pred             CCcCCCCCEEEEE-EEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCc
Confidence            4567888888886 999988999999998777899999999999999999999999999999999999999999987789


Q ss_pred             CCCCeEEEEEEEeeeeec
Q psy5048         125 PGGLSAVRQSEHSELEIS  142 (319)
Q Consensus       125 p~~~~l~feVeL~~v~~~  142 (319)
                      ||+++|+|+|+|++|...
T Consensus        82 p~~~~l~f~v~l~~v~~~   99 (102)
T 2pbc_A           82 PGGATLVFEVELLKIERR   99 (102)
T ss_dssp             CTTCCEEEEEEEEEEGGG
T ss_pred             CcCCeEEEEEEEEEeccc
Confidence            999999999999999853

>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A

Probab=99.85  E-value=1.2e-21  Score=161.51  Aligned_cols=111  Identities=37%  Similarity=0.534  Sum_probs=100.7

Q ss_pred             eeecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhc------ccc
Q psy5048          28 LSLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTE------MCV  101 (319)
Q Consensus        28 l~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~------Mk~  101 (319)
                      .......+.+.+++.|.|..|..++.|+++ |++++.||++|++++.+++|+.|.+|.+++|+||+++|.+      |++
T Consensus         7 ~~~~~~Gl~~~~l~~G~G~~~~~gd~V~v~-Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~   85 (129)
T 1u79_A            7 FSVSPSGLAFCDKVVGYGPEAVKGQLIKAH-YVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLT   85 (129)
T ss_dssp             CEECTTSCEEEEEECCSSCBCCTTCEEEEE-EEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBT
T ss_pred             cEECCCCeEEEEEEcCCCCCCCCCCEEEEE-EEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccCC
Confidence            344556788889999999999999999996 9999989999999987678999999999999999999998      999


Q ss_pred             CcEEEEEeCCCCCCCCCCCC-----CCCCCCCeEEEEEEEeee
Q psy5048         102 GEKRKLTIPPALAYGDRGAG-----NVIPGGLSAVRQSEHSEL  139 (319)
Q Consensus       102 GE~~~v~i~p~~ayG~~g~~-----~~Ip~~~~l~feVeL~~v  139 (319)
                      ||+++|.|||+++||..+..     +.||||++|+|+|+|++|
T Consensus        86 Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i  128 (129)
T 1u79_A           86 GGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK  128 (129)
T ss_dssp             TCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred             CCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence            99999999999999998863     469999999999999986

>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A

Probab=99.85  E-value=6.1e-21  Score=154.68  Aligned_cols=107  Identities=19%  Similarity=0.188  Sum_probs=96.5

Q ss_pred             eecccc-eEEEEeecCcCC--CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEE
Q psy5048          29 SLSPYS-LSLILPRRAENL--KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKR  105 (319)
Q Consensus        29 ~~d~~l-v~~~i~~~G~G~--~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~  105 (319)
                      ...... +.+.++++|.|.  .|..++.|+++ |++++.||++|+++    .|+.|.+|.+++++||+++|.+|++||++
T Consensus         8 ~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~-y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~   82 (118)
T 2awg_A            8 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVH-LQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETA   82 (118)
T ss_dssp             ESSSSSSEEEEEEECCCTTCCCCCTTSEEEEE-EEEECTTSCEEEEE----EEEEEETTSSCSCHHHHHHGGGSCTTCEE
T ss_pred             EECCCCCEEEEEEEcCCCCCccCCCCCEEEEE-EEEEECCCCEEECC----CCEEEEECCCChhHHHHHHHhCCCCCCEE
Confidence            334444 677889999997  78889999886 99998899999984    58999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048         106 KLTIPPALAYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       106 ~v~i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      +|+|||+++||..+.++.||||++|+|+|+|++|+
T Consensus        83 ~~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~  117 (118)
T 2awg_A           83 MVTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV  117 (118)
T ss_dssp             EEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred             EEEEChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence            99999999999999877899999999999999986

>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A

Probab=99.85  E-value=5.9e-21  Score=171.27  Aligned_cols=107  Identities=30%  Similarity=0.432  Sum_probs=99.2

Q ss_pred             ecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEe
Q psy5048          30 LSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTI  109 (319)
Q Consensus        30 ~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i  109 (319)
                      ..+..+.+.++++|.|..|..++.|++| |++++.||++||+++.++.|++|.+  +.+|+||+++|.+|++|++++|+|
T Consensus       118 ~~~sGl~y~vl~~G~G~~p~~gD~V~V~-Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~I  194 (224)
T 1q6h_A          118 TSSTGLVYQVVEAGKGEAPKDSDTVVVN-YKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPGWTEGLKNIKKGGKIKLVI  194 (224)
T ss_dssp             ECTTSCEEEEEECCSSCCCCTTCEEEEE-EEEEETTSCEEEEGGGGTSCEEEEG--GGSCHHHHHHGGGSCTTCEEEEEE
T ss_pred             ECCCceEEEEEecccCccccCCCEEEEE-EEEEeCCCCEEeeccccCCCEEEEc--CCcchhHHHHHcCCCCCCEEEEEE
Confidence            3466778889999999999999999996 9999999999999998888999999  589999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048         110 PPALAYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       110 ~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      ||+++||..+.++ ||||++|+|+|+|++|+
T Consensus       195 P~~laYG~~g~~~-IPp~stLiF~VeL~~ik  224 (224)
T 1q6h_A          195 PPELAYGKAGVPG-IPPNSTLVFDVELLDVK  224 (224)
T ss_dssp             CGGGTTTTTCBTT-BCTTCCEEEEEEEEEEC
T ss_pred             CchhhcCcCCCCC-CCCCCEEEEEEEEEEeC
Confidence            9999999999876 99999999999999874

>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.84  E-value=1.3e-20  Score=156.51  Aligned_cols=110  Identities=18%  Similarity=0.171  Sum_probs=98.5

Q ss_pred             eecccc-eEEEEeecCcCC--CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEE
Q psy5048          29 SLSPYS-LSLILPRRAENL--KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKR  105 (319)
Q Consensus        29 ~~d~~l-v~~~i~~~G~G~--~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~  105 (319)
                      ...... +.+.++++|.|.  .|..++.|+++ |++++.||++|+++    .|+.|.+|.+++|+||+++|.+|++||++
T Consensus        12 ~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~-Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~   86 (135)
T 2d9f_A           12 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVH-LQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETA   86 (135)
T ss_dssp             ESSSSSSSEEEEEECCCSSCCCCCTTSEEEEE-EEEEESSSCEEEEE----EEEEEETTSCCSCTTTTTTGGGSCTTCEE
T ss_pred             EECCCCCEEEEEEEcCCCCCccCCCCCEEEEE-EEEEECCCCEEecC----CCEEEEeCCCChhHHHHHHHhCCCCCCEE
Confidence            334444 678889999997  88899989886 99999999999973    58999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCC-CCCCCCCCCeEEEEEEEeeeeecc
Q psy5048         106 KLTIPPALAYGDRG-AGNVIPGGLSAVRQSEHSELEIST  143 (319)
Q Consensus       106 ~v~i~p~~ayG~~g-~~~~Ip~~~~l~feVeL~~v~~~~  143 (319)
                      .|+|||+++||..+ .++.||||++|+|+|+|++|...+
T Consensus        87 ~v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~  125 (135)
T 2d9f_A           87 MVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRP  125 (135)
T ss_dssp             EEEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSC
T ss_pred             EEEEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCC
Confidence            99999999999998 666799999999999999999755

>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A

Probab=99.82  E-value=6.5e-20  Score=169.95  Aligned_cols=130  Identities=26%  Similarity=0.361  Sum_probs=111.3

Q ss_pred             cceEEEEeecCcCCC-CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCC
Q psy5048          33 YSLSLILPRRAENLK-PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPP  111 (319)
Q Consensus        33 ~lv~~~i~~~G~G~~-p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p  111 (319)
                      ..+.+.++++|.|.. |..++.|+++ |++++.||++|++++.++.|+.|.+|.+.+|+||+++|.+|++||++.|+|||
T Consensus        51 ~gl~~~vl~~G~G~~~~~~gd~V~v~-Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ipp  129 (280)
T 1q1c_A           51 EGVLKVIKREGTGTEMPMIGDRVFVH-YTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKP  129 (280)
T ss_dssp             SSEEEEEEECCSSSCCCCTTCEEEEE-EEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEECG
T ss_pred             CceEEEEEeCCCCCcCCCCCCEEEEE-EEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEEEECc
Confidence            357788999999987 9999999986 99999999999999887789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCeEEEEEEEeeeeeccchhhccCccccchhhhhhhhcCCcc
Q psy5048         112 ALAYGDRGAGNVIPGGLSAVRQSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMA  168 (319)
Q Consensus       112 ~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~~~~~~~~m~~eek~~~a~~~ke~Gn~~  168 (319)
                      +++||..+.++.||++++|+|+|+|++|...     ++.+..+..+..+....|+..
T Consensus       130 ~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~~-----~~~~~~d~gl~~~il~~G~G~  181 (280)
T 1q1c_A          130 EYAYGSAGSPPKIPPNATLVFEVELFEFKGE-----DLTEEEDGGIIRRIQTRGEGY  181 (280)
T ss_dssp             GGTTTTTCBTTTBCTTCCEEEEEEEEEEECE-----ECCTTCSSSEEEEEEECCSCS
T ss_pred             HHhCCCcCccCCCCCCCcEEEEEEeeeeccc-----ccccccccceeEEeeeccccc
Confidence            9999999988889999999999999999853     234434444544444555543

>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1

Probab=99.62  E-value=5.8e-16  Score=124.57  Aligned_cols=87  Identities=17%  Similarity=0.205  Sum_probs=73.9

Q ss_pred             CCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCC
Q psy5048          45 NLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI  124 (319)
Q Consensus        45 G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~I  124 (319)
                      +..+..++.|+++ |++++ ||++||+++  +.|+.|.+|.+++|+||+++|.+|++||++.|.|+++..||..+.    
T Consensus        27 ~~~~~~gD~V~v~-Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~----   98 (113)
T 1hxv_A           27 DKKLANGDIAIID-FTGIV-DNKKLASAS--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL----   98 (113)
T ss_dssp             --CCCSSEEEEEE-EEEEE-TTEECSTTC--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG----
T ss_pred             CCCCCCCCEEEEE-EEEEE-CCEEcccCC--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC----
Confidence            3456777878875 99998 999999985  579999999999999999999999999999999984444998764    


Q ss_pred             CCCCeEEEEEEEeeee
Q psy5048         125 PGGLSAVRQSEHSELE  140 (319)
Q Consensus       125 p~~~~l~feVeL~~v~  140 (319)
                       ++++++|+|+|++|+
T Consensus        99 -~g~~l~F~V~l~~Vk  113 (113)
T 1hxv_A           99 -QSKPVTFEVVLKAIK  113 (113)
T ss_dssp             -GSCCCEEEEEECCBC
T ss_pred             -CCCEEEEEEEEEEEC
Confidence             469999999999874

>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}

Probab=99.61  E-value=8.2e-16  Score=131.98  Aligned_cols=72  Identities=24%  Similarity=0.366  Sum_probs=66.6

Q ss_pred             CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCC
Q psy5048          47 KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG  119 (319)
Q Consensus        47 ~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g  119 (319)
                      .+..++.|+++ |++++.||++||+|+..++|+.|.+|.+++|+||+++|.+|++||++.|+|||++|||..+
T Consensus        24 ~i~~gd~V~v~-Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~   95 (169)
T 4dt4_A           24 SVQSNSAVLVH-FTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS   95 (169)
T ss_dssp             SCCTTCEEEEE-EEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC
T ss_pred             cCCCCCEEEEE-EEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence            46678888886 9999999999999988778999999999999999999999999999999999999999865

>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A

Probab=99.58  E-value=3.3e-15  Score=126.81  Aligned_cols=71  Identities=27%  Similarity=0.426  Sum_probs=64.1

Q ss_pred             CCCCCcEEEEEEEEEEeCCcEEeeeccC-------------CCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCC
Q psy5048          48 PYVNVKICVSSFKPTFKLTLVAMRIHDR-------------DQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALA  114 (319)
Q Consensus        48 p~~~~~v~v~~y~~~l~dg~v~d~s~~~-------------~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~a  114 (319)
                      ...++.|+++ |++++ ||++||+|+..             +.|+.|.+|.+++|+||+++|.+|++||++.|+|||++|
T Consensus         2 i~~Gd~V~v~-Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~a   79 (157)
T 3pr9_A            2 VEKGKMVKIS-YDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKA   79 (157)
T ss_dssp             CCTTCEEEEE-EEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGT
T ss_pred             CCCCCEEEEE-EEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHh
Confidence            3567888886 99999 99999999763             369999999999999999999999999999999999999


Q ss_pred             CCCCCC
Q psy5048         115 YGDRGA  120 (319)
Q Consensus       115 yG~~g~  120 (319)
                      ||..+.
T Consensus        80 YG~~~~   85 (157)
T 3pr9_A           80 FGKRDP   85 (157)
T ss_dssp             TCCCCG
T ss_pred             cCCCCh
Confidence            998764

>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}

Probab=99.55  E-value=3.7e-14  Score=121.99  Aligned_cols=70  Identities=17%  Similarity=0.296  Sum_probs=63.3

Q ss_pred             CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCC
Q psy5048          48 PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG  119 (319)
Q Consensus        48 p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g  119 (319)
                      +..++.|+++ |++++.||++|++|+.. +|+.|.+|.+++|+||+++|.+|++|+++.|+|||+.+||..+
T Consensus         3 i~~gd~V~v~-Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~   72 (171)
T 2k8i_A            3 VAKDLVVSLA-YQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD   72 (171)
T ss_dssp             CCTTEEEEEE-EEEEETTSCEEEECCSS-SCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred             CCCCCEEEEE-EEEEECCCCEEeeccCC-cCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence            4566777775 99998899999998753 6999999999999999999999999999999999999999885

>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A

Probab=99.54  E-value=2.2e-14  Score=128.84  Aligned_cols=93  Identities=23%  Similarity=0.333  Sum_probs=79.8

Q ss_pred             CCCCcEEEEEEEEEEeCCcEEeeeccC-------------CCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCC
Q psy5048          49 YVNVKICVSSFKPTFKLTLVAMRIHDR-------------DQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAY  115 (319)
Q Consensus        49 ~~~~~v~v~~y~~~l~dg~v~d~s~~~-------------~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ay  115 (319)
                      ..|+.|+++ |++++ ||++||+|+..             +.|+.|.+|.+++|+||+++|.+|++|+++.|+|||++||
T Consensus         3 ~~Gd~V~v~-Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY   80 (231)
T 3prb_A            3 EKGKMVKIS-YDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF   80 (231)
T ss_dssp             CTTCEEEEE-EEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred             CCCCEEEEE-EEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence            467888886 99999 99999999753             3799999999999999999999999999999999999999


Q ss_pred             CCCCCCC-------------C-------------------------------CCCCCeEEEEEEEeeeeecc
Q psy5048         116 GDRGAGN-------------V-------------------------------IPGGLSAVRQSEHSELEIST  143 (319)
Q Consensus       116 G~~g~~~-------------~-------------------------------Ip~~~~l~feVeL~~v~~~~  143 (319)
                      |..+...             .                               --++.+|.|+|+|++|....
T Consensus        81 Ge~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~eat  152 (231)
T 3prb_A           81 GKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVVDDK  152 (231)
T ss_dssp             CCCCGGGEEEEETHHHHTTTCCCCTTCEEEETTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEECCSH
T ss_pred             CCCChHHEEecCHHHCCcccCCCCCCcEEEecCCCEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEecCC
Confidence            9876211             0                               12688999999999998644

>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}

Probab=99.53  E-value=3.1e-14  Score=120.16  Aligned_cols=72  Identities=19%  Similarity=0.364  Sum_probs=64.6

Q ss_pred             CCCCCCcEEEEEEEEEEe-CCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCC
Q psy5048          47 KPYVNVKICVSSFKPTFK-LTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGA  120 (319)
Q Consensus        47 ~p~~~~~v~v~~y~~~l~-dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~  120 (319)
                      .+..++.|+++ |++++. ||++|++|+. +.|+.|.+|.+++|+||+++|.+|++|+++.|+|||+++||..+.
T Consensus         6 ~i~~gd~V~v~-Y~g~~~~dG~~fdss~~-~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~   78 (151)
T 2kr7_A            6 LESIKQAALIE-YEVREQGSSIVLDSNIS-KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES   78 (151)
T ss_dssp             CTTSCCEEEEE-EEEEESSCSCEEEESTT-TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred             CCCCCCEEEEE-EEEEECCCCCEEEeCCC-CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence            45677888886 999987 9999999975 369999999999999999999999999999999999999998753

>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}

Probab=99.51  E-value=5.9e-14  Score=123.20  Aligned_cols=71  Identities=17%  Similarity=0.292  Sum_probs=64.1

Q ss_pred             CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCC
Q psy5048          48 PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGA  120 (319)
Q Consensus        48 p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~  120 (319)
                      +..++.|+++ |++++.||++|++|+.. +|++|.+|.+++||||+++|.+|++|+++.|+|||+++||..+.
T Consensus         3 i~~gd~V~v~-Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~   73 (196)
T 2kfw_A            3 VAKDLVVSLA-YQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDE   73 (196)
T ss_dssp             CCSSCEEEEE-EEEEETTTEEEEECCTT-SCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCT
T ss_pred             CCCCCEEEEE-EEEEECCCCEEEecCCC-CCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh
Confidence            4567888885 99998899999999753 69999999999999999999999999999999999999998753

>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1

Probab=99.51  E-value=1.2e-14  Score=122.60  Aligned_cols=73  Identities=29%  Similarity=0.491  Sum_probs=65.3

Q ss_pred             CCCCCcEEEEEEEEEEeCCcEEeeecc-------------CCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCC
Q psy5048          48 PYVNVKICVSSFKPTFKLTLVAMRIHD-------------RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALA  114 (319)
Q Consensus        48 p~~~~~v~v~~y~~~l~dg~v~d~s~~-------------~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~a  114 (319)
                      +..++.|+++ |++++.||++||+|+.             ...|+.|.+|.+++|+||+++|.+|++|+++.|+|||++|
T Consensus         2 i~~gd~V~v~-Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~a   80 (151)
T 1ix5_A            2 VDKGVKIKVD-YIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKA   80 (151)
T ss_dssp             CCTTCEEEEC-CEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTS
T ss_pred             CCCCCEEEEE-EEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHH
Confidence            4577888886 9999889999999974             3369999999999999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy5048         115 YGDRGAG  121 (319)
Q Consensus       115 yG~~g~~  121 (319)
                      ||..+..
T Consensus        81 YG~~~~~   87 (151)
T 1ix5_A           81 YGNRNEM   87 (151)
T ss_dssp             SCSCCST
T ss_pred             CCCCCcc
Confidence            9987643

>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*

Probab=99.41  E-value=5.1e-13  Score=113.49  Aligned_cols=65  Identities=17%  Similarity=0.220  Sum_probs=59.2

Q ss_pred             CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCC
Q psy5048          48 PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG  119 (319)
Q Consensus        48 p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g  119 (319)
                      +..++.|+++ |+++ .||++|++++     +.|.+|.+++|+||+++|.+|++||++.|+|||+++||..+
T Consensus         3 i~~gd~V~v~-Y~g~-~dG~~fdss~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~   67 (158)
T 3cgm_A            3 VGQDKVVTIR-YTLQ-VEGEVLDQGE-----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD   67 (158)
T ss_dssp             CCTTEEEEEE-EEEE-ETTEEEEEEE-----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC
T ss_pred             CCCCCEEEEE-EEEE-ECCEEEEeeE-----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC
Confidence            3466777775 9999 8999999986     89999999999999999999999999999999999999865

>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5

Probab=99.40  E-value=8.1e-13  Score=129.24  Aligned_cols=102  Identities=16%  Similarity=0.232  Sum_probs=86.0

Q ss_pred             CCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCC
Q psy5048          45 NLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI  124 (319)
Q Consensus        45 G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~I  124 (319)
                      +..+..|+.|+++ |+++. ||++|++++  +.|+.|.+|.|.+||||+.+|.||++|+++.|.++++.+||..+.    
T Consensus       155 ~~~~~~gD~V~i~-y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l----  226 (432)
T 1w26_A          155 DGAVEAEDRVTID-FTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL----  226 (432)
T ss_dssp             SSCCCTTCEEEEC-EEEES-SSCBCSSCC--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT----
T ss_pred             CCCCCCCCEEEEE-EEEee-CCeEccCCC--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC----
Confidence            4456777888875 99984 999999886  569999999999999999999999999999999999999998765    


Q ss_pred             CCCCeEEEEEEEeeeeeccchhhccCccccchhhhhh
Q psy5048         125 PGGLSAVRQSEHSELEISTKFFLELIPNKFLHWDRRF  161 (319)
Q Consensus       125 p~~~~l~feVeL~~v~~~~~~~~~m~~eek~~~a~~~  161 (319)
                       ++.+++|+|+|++|...      -.|+-+.++++.+
T Consensus       227 -ag~~~~F~V~v~~v~~~------~lpeldDEfak~~  256 (432)
T 1w26_A          227 -KGKAAKFAINLKKVEER------ELPELTAEFIKRF  256 (432)
T ss_dssp             -SSCEEEEEEECCEECCE------ECCCCSHHHHTTT
T ss_pred             -CCceEEEEEEEEEEecc------CCCCcchHHHHHh
Confidence             45899999999999842      2555566777655

>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}

Probab=99.38  E-value=2.1e-13  Score=113.27  Aligned_cols=138  Identities=12%  Similarity=0.018  Sum_probs=96.9

Q ss_pred             CccccchhhhhhhhcCCcccccchHHHHHHHHhhhhhcc------cCCcc-------hhHHHHHHHhhHHHHHHhcccch
Q psy5048         150 IPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQ------SFKPH-------RAESEKLYAHCSSAYALLVKKTP  216 (319)
Q Consensus       150 ~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~------~~k~~-------~~~~~~l~~~~~~~~~~~~~~~~  216 (319)
                      .+++++..+..+++.|+.++..+++..+...- .+....      ...|.       +.....++.++-.|+..+..+..
T Consensus         3 ~~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y-~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~   81 (162)
T 3rkv_A            3 AEDDKLKSVEALRQKGNELFVQKDYKEAIDAY-RDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHE   81 (162)
T ss_dssp             -----CHHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH-HHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH
Confidence            35678889999999999999988886544311 111000      01111       11122334444447778899999


Q ss_pred             hHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChh-hHHHHHHHHHHHHhHhHHHHHH
Q psy5048         217 SIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQS-QCLPLLGIRAQHQRGHMITQGS  287 (319)
Q Consensus       217 a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~-~i~~el~~l~~~~k~~~~kek~  287 (319)
                      |+..|..++..+|       +|++|+||+|..+..+++++        |++++|+|. ++..+|..|.++++++.+++++
T Consensus        82 A~~~~~~al~~~p-------~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~k~  154 (162)
T 3rkv_A           82 AEETSSEVLKREE-------TNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADSRV  154 (162)
T ss_dssp             HHHHHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSSCC
T ss_pred             HHHHHHHHHhcCC-------cchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999       99999999999888888886        999999999 9999999999999999999999


Q ss_pred             HHHhcccC
Q psy5048         288 LYFFLFYN  295 (319)
Q Consensus       288 ~y~~mF~~  295 (319)
                      +|++||++
T Consensus       155 ~~~~~f~~  162 (162)
T 3rkv_A          155 TYSKMFQP  162 (162)
T ss_dssp             --------
T ss_pred             HHHHhcCC
Confidence            99999974

>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A

Probab=99.22  E-value=8.5e-12  Score=120.55  Aligned_cols=101  Identities=15%  Similarity=0.210  Sum_probs=83.2

Q ss_pred             CCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCCC
Q psy5048          46 LKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP  125 (319)
Q Consensus        46 ~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~Ip  125 (319)
                      ..+..|+.|+++ |+++ .||++|+++.  +.|+.|.+|.|.+||||+++|.||++|+++.|.|+++..||..+.     
T Consensus       159 ~~~~~gD~V~i~-y~g~-~dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l-----  229 (392)
T 1t11_A          159 EAAENGKRVSID-FVGS-IDGVEFEGGK--AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL-----  229 (392)
T ss_dssp             CCCCTTCEEEEE-EEEE-SSSSCCTTCE--EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT-----
T ss_pred             CCCCCCCEEEEE-EEEE-ECCEEccCCC--ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC-----
Confidence            346677777775 9998 4999999874  468999999999999999999999999999999997788987655     


Q ss_pred             CCCeEEEEEEEeeeeeccchhhccCccccchhhhhh
Q psy5048         126 GGLSAVRQSEHSELEISTKFFLELIPNKFLHWDRRF  161 (319)
Q Consensus       126 ~~~~l~feVeL~~v~~~~~~~~~m~~eek~~~a~~~  161 (319)
                      +|.+++|+|+|++|...      -.|+-+.++++.+
T Consensus       230 aGk~~~F~V~v~~i~~~------~lpeldDEfak~~  259 (392)
T 1t11_A          230 KGKAAKFAIKVNKVEAR------ELPELNDEFVARF  259 (392)
T ss_dssp             SSCEEEECCCEEEEEEE------ECCCCSTGGGGGG
T ss_pred             CCCeEEEEEEEEEEEcC------CCCCcCHHHHHHh
Confidence            46999999999999853      2455556777654

>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1

Probab=98.87  E-value=2.3e-09  Score=91.55  Aligned_cols=157  Identities=4%  Similarity=-0.108  Sum_probs=100.6

Q ss_pred             EEEEeeeeeccchhhccCccccchhhhhhhhcCCcccccchHHHHHHHHhhhhhcc-cCCcc------h----hHHHHHH
Q psy5048         133 QSEHSELEISTKFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQ-SFKPH------R----AESEKLY  201 (319)
Q Consensus       133 eVeL~~v~~~~~~~~~m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~-~~k~~------~----~~~~~l~  201 (319)
                      ...+..++... ..|+|+.+++...+......|+.++..+++..+...- .+.... +..+.      .    .....+.
T Consensus        14 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~-~~al~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (198)
T 2fbn_A           14 RENLYFQGAKK-SIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKY-KEALDFFIHTEEWDDQILLDKKKNIEISCN   91 (198)
T ss_dssp             --------CCC-SGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHTTTTCTTCCCHHHHHHHHHHHHHHH
T ss_pred             hhhhhhccccC-chhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH-HHHHHHHhcccccchhhHHHHHHHHHHHHH
Confidence            34445566555 5699999999999999999999998888886544311 111110 01000      0    0001233


Q ss_pred             HhhHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHH
Q psy5048         202 AHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGI  273 (319)
Q Consensus       202 ~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~  273 (319)
                      ..+-.++..+..+..|+..|..++..+|       +|.+++|++|..+..+++++        +++++|++..+...|..
T Consensus        92 ~~la~~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~  164 (198)
T 2fbn_A           92 LNLATCYNKNKDYPKAIDHASKVLKIDK-------NNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYEL  164 (198)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHhCc-------ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence            3333456777999999999999999998       99999999999777778775        89999999999999999


Q ss_pred             HHHHHhHhHHHHHHHHHhcccCCCC
Q psy5048         274 RAQHQRGHMITQGSLYFFLFYNMSS  298 (319)
Q Consensus       274 l~~~~k~~~~kek~~y~~mF~~~~~  298 (319)
                      +..++.++.+.++..|+.||...+-
T Consensus       165 ~~~~~~~~~~~~~~~~~~~f~~~~~  189 (198)
T 2fbn_A          165 CVNKLKEARKKDKLTFGGMFDKGPL  189 (198)
T ss_dssp             HHHHHHHHHC---------------
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccch
Confidence            9999999999999999999997653

>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A

Probab=98.74  E-value=5.6e-09  Score=99.48  Aligned_cols=136  Identities=11%  Similarity=0.009  Sum_probs=95.9

Q ss_pred             ccccchhhhhhhhcCCcccccchHHHHHHHHhhhhhcc--------cCC---cchhHHHHHHHhhHHHHHHhcccchhHh
Q psy5048         151 PNKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQ--------SFK---PHRAESEKLYAHCSSAYALLVKKTPSIH  219 (319)
Q Consensus       151 ~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~--------~~k---~~~~~~~~l~~~~~~~~~~~~~~~~a~~  219 (319)
                      .++....+......|+.++..+++..+...- .+....        ...   ..+.....++.++-.++..+.++..|+.
T Consensus       216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y-~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~  294 (370)
T 1ihg_A          216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKY-TKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVD  294 (370)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH-HHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence            4455556777888898888888776443211 111000        000   0011122233333346677799999999


Q ss_pred             HHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHHHHHHHHh
Q psy5048         220 NCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLYFF  291 (319)
Q Consensus       220 ~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~~y~~  291 (319)
                      .|..+|+.+|       +|.+|+|++|..+..+++++        |++++|++..+...|..+.++++++.++++++|++
T Consensus       295 ~~~~al~~~p-------~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~~~~k  367 (370)
T 1ihg_A          295 SCLEALEIDP-------SNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAYAK  367 (370)
T ss_dssp             HHHHHHTTCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHCCC--
T ss_pred             HHHHHHHhCc-------hhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998       99999999999888788886        89999999999999999999999999999999999


Q ss_pred             ccc
Q psy5048         292 LFY  294 (319)
Q Consensus       292 mF~  294 (319)
                      ||+
T Consensus       368 mf~  370 (370)
T 1ihg_A          368 MFA  370 (370)
T ss_dssp             ---
T ss_pred             hhC
Confidence            995

>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8

Probab=98.43  E-value=3.7e-08  Score=83.44  Aligned_cols=124  Identities=11%  Similarity=-0.097  Sum_probs=90.3

Q ss_pred             cchhhhhhhhcCCcccccchHHHHHHHH-hhhhhcccC---Cc--chhHHHHHHHhhHHHHHHhcccchhHhHHhhhhcc
Q psy5048         154 FLHWDRRFTQKGPMAKNREHIAHRARRD-RGKRRIQSF---KP--HRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTK  227 (319)
Q Consensus       154 k~~~a~~~ke~Gn~~~~~~~~~~~~~~~-~~k~~~~~~---k~--~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~  227 (319)
                      ....+......||.++..+.|..+...- .........   ..  ....-...+.+.-.+...+.++..|+..|..+|+.
T Consensus         7 ~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l   86 (159)
T 2hr2_A            7 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY   86 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence            3456778888999998888887544311 111111110   00  00011113444445778889999999999999998


Q ss_pred             -------ccccccCCCCChhHH----HHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHH
Q psy5048         228 -------SMLTFARNQSTIPAW----THDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMIT  284 (319)
Q Consensus       228 -------~~l~~~~~~~NvKAL----fRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~k  284 (319)
                             +|       ++.|||    ||||.++..++.++        |++++|+++.|..+|..+++++++..+|
T Consensus        87 ~n~~~e~~p-------d~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~~~k  155 (159)
T 2hr2_A           87 FNRRGELNQ-------DEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDRIAQ  155 (159)
T ss_dssp             HHHHCCTTS-------THHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHHHHH
T ss_pred             hhccccCCC-------chHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence                   88       999999    99999998888886        9999999999999999999999988765

>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}

Probab=98.32  E-value=4.8e-07  Score=72.31  Aligned_cols=106  Identities=11%  Similarity=0.130  Sum_probs=79.4

Q ss_pred             hhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCC
Q psy5048         156 HWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARN  235 (319)
Q Consensus       156 ~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~  235 (319)
                      +.+...++.|+.++..+++..+... ..+....  .|...   ..+...-.++..+..+..|+..|.++++.+|      
T Consensus        11 ~~a~~~~~~G~~~~~~g~~~~A~~~-~~~al~~--~p~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p------   78 (126)
T 4gco_A           11 ELAQEEKNKGNEYFKKGDYPTAMRH-YNEAVKR--DPENA---ILYSNRAACLTKLMEFQRALDDCDTCIRLDS------   78 (126)
T ss_dssp             HHHHHHHHHHHHHHHTTCHHHHHHH-HHHHHHH--CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHh--CCCCH---HHHHHHhhHHHhhccHHHHHHHHHHHHHhhh------
Confidence            4577888999999999988755431 1111111  11111   2333334466788999999999999999999      


Q ss_pred             CCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHH
Q psy5048         236 QSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIR  274 (319)
Q Consensus       236 ~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l  274 (319)
                       +|++|+|++|..+..+++++        |++++|+|.++...|..|
T Consensus        79 -~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~  124 (126)
T 4gco_A           79 -KFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNC  124 (126)
T ss_dssp             -TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred             -hhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence             99999999999888888886        999999999999888765

>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A

Probab=98.16  E-value=5.1e-06  Score=81.05  Aligned_cols=100  Identities=8%  Similarity=0.030  Sum_probs=74.5

Q ss_pred             CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCCCCC
Q psy5048          48 PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG  127 (319)
Q Consensus        48 p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~Ip~~  127 (319)
                      ...|+.|++ +|.++ .||..|+++..  .++.|.+|.+.  + |+.+|.||++||...|.+..              +|
T Consensus       155 a~~gD~V~i-d~~~~-~dG~~~~~~~~--~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF--------------aG  213 (433)
T 3gty_X          155 AEAGDLVRV-NMEVY-NEEGKKLTSRE--YEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY--------------EG  213 (433)
T ss_dssp             CCTTSEEEE-EEEEE-CTTSCEEEEEE--EEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE--------------TT
T ss_pred             cCCCCEEEE-EEEEE-ECCEECcCCCC--CCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee--------------CC
Confidence            345677766 59998 59999997643  57889999887  3 99999999999999999854              35


Q ss_pred             CeEEEEEEEeeeeeccchhhccCccccchhhhhhh-hcCCcccccchH
Q psy5048         128 LSAVRQSEHSELEISTKFFLELIPNKFLHWDRRFT-QKGPMAKNREHI  174 (319)
Q Consensus       128 ~~l~feVeL~~v~~~~~~~~~m~~eek~~~a~~~k-e~Gn~~~~~~~~  174 (319)
                      .+..|+|+|.+|...      -.|+-+.+++..+. +.++.-..+.+.
T Consensus       214 k~a~F~VtV~~Ik~~------~lPEldDEfak~~~~~~~tleelk~~i  255 (433)
T 3gty_X          214 KKYTYKLEVEEVYKR------TLPEIGDELAKSVNNEFETLEQLKESL  255 (433)
T ss_dssp             EEEEEEEEEEEEEEE------CCCCSSHHHHHTTCSSCCSHHHHHHHH
T ss_pred             CeEEEEEEEEEEEEe------cCCcccHHHHHHhCCCCCCHHHHHHHH
Confidence            799999999999853      35666677887764 234444344433

>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}

Probab=97.43  E-value=0.00011  Score=56.98  Aligned_cols=108  Identities=13%  Similarity=0.092  Sum_probs=76.5

Q ss_pred             hhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCC
Q psy5048         158 DRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQS  237 (319)
Q Consensus       158 a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~  237 (319)
                      +......|+.++..+++..+...- .+....  .|...   ......-.++..+..+..|+..+..++..+|       +
T Consensus         4 a~~~~~~g~~~~~~~~~~~A~~~~-~~al~~--~p~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p-------~   70 (126)
T 3upv_A            4 AEEARLEGKEYFTKSDWPNAVKAY-TEMIKR--APEDA---RGYSNRAAALAKLMSFPEAIADCNKAIEKDP-------N   70 (126)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHH-HHHHHH--CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------T
T ss_pred             HHHHHHHHHHHHHhcCHHHHHHHH-HHHHHh--CCCCh---HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-------C
Confidence            345566777777777775443211 111111  11111   2333333466778999999999999999999       9


Q ss_pred             ChhHHHHHHHHHHhcCccc--------cccCC------CChhhHHHHHHHHHHHH
Q psy5048         238 TIPAWTHDYTRLALLLPFL--------QYEFP------PEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       238 NvKALfRrg~~~~~~~~~~--------a~~~d------P~n~~i~~el~~l~~~~  278 (319)
                      |..++|++|..+..+++++        +++++      |.|..+...|..+.+++
T Consensus        71 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l  125 (126)
T 3upv_A           71 FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR  125 (126)
T ss_dssp             CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence            9999999999887788876        88899      99999999999988764

>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}

Probab=97.33  E-value=0.00017  Score=58.84  Aligned_cols=119  Identities=9%  Similarity=-0.011  Sum_probs=83.2

Q ss_pred             cchhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhcccccccc
Q psy5048         154 FLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFA  233 (319)
Q Consensus       154 k~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~  233 (319)
                      +...+......|+.++..+++..+...- .+.....  |..   ......+-.++..+.++..|+..+..++..+|    
T Consensus         7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~-~~al~~~--p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p----   76 (164)
T 3sz7_A            7 PTPESDKLKSEGNAAMARKEYSKAIDLY-TQALSIA--PAN---PIYLSNRAAAYSASGQHEKAAEDAELATVVDP----   76 (164)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHHS--TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----
T ss_pred             hhhhHHHHHHHHHHHHHcCCHHHHHHHH-HHHHHhC--CcC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC----
Confidence            3345666777788877777775443211 1111111  111   12233333456778999999999999999999    


Q ss_pred             CCCCChhHHHHHHHHHHhcCccc--------cccCCCChhh--HHHHHHHHHHHHhHhHHHH
Q psy5048         234 RNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQ--CLPLLGIRAQHQRGHMITQ  285 (319)
Q Consensus       234 ~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~--i~~el~~l~~~~k~~~~ke  285 (319)
                         +|..++|++|..+..+++++        +++++|++.+  +...+..+++++.+...++
T Consensus        77 ---~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~~~  135 (164)
T 3sz7_A           77 ---KYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEANRGA  135 (164)
T ss_dssp             ---TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHHHCS
T ss_pred             ---CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence               99999999999887778876        8999999988  7888888888887766543

>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}

Probab=96.82  E-value=0.00067  Score=53.55  Aligned_cols=105  Identities=10%  Similarity=-0.026  Sum_probs=69.6

Q ss_pred             hhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCC
Q psy5048         156 HWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARN  235 (319)
Q Consensus       156 ~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~  235 (319)
                      +.+...++-||.++..+++..+... ..+....  .|..   ...+.+.-.++..+.++..|+..|.++++.+|      
T Consensus         6 d~A~a~~~lG~~~~~~~~~~~A~~~-y~~Al~~--~p~~---~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~------   73 (127)
T 4gcn_A            6 DAAIAEKDLGNAAYKQKDFEKAHVH-YDKAIEL--DPSN---ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGR------   73 (127)
T ss_dssp             HHHHHHHHHHHHHHHTTCHHHHHHH-HHHHHHH--CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH------
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHh--CCCC---HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCc------
Confidence            4566677889999988888654431 1111111  1121   12333344466888999999999999999887      


Q ss_pred             CCC-------hhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHH
Q psy5048         236 QST-------IPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIR  274 (319)
Q Consensus       236 ~~N-------vKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l  274 (319)
                       ++       .++++|+|..+..++++.        +++++|+ +++...|+.|
T Consensus        74 -~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~l  125 (127)
T 4gcn_A           74 -ETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKEL  125 (127)
T ss_dssp             -HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHH
T ss_pred             -ccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHh
Confidence             55       468999999777777776        7777775 4555555544

>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*

Probab=96.44  E-value=0.002  Score=49.91  Aligned_cols=72  Identities=10%  Similarity=0.068  Sum_probs=61.8

Q ss_pred             HHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCC-----hhhHHHHHH
Q psy5048         206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPE-----QSQCLPLLG  272 (319)
Q Consensus       206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~-----n~~i~~el~  272 (319)
                      .++..+..+..|+..+..++..+|       +|..++|.+|..+..++++.        +++++|+     +..+...|.
T Consensus        51 ~~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~  123 (137)
T 3q49_B           51 LCYLKMQQPEQALADCRRALELDG-------QSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALR  123 (137)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHH
T ss_pred             HHHHHhcCHHHHHHHHHHHHHhCc-------hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHH
Confidence            355677899999999999999998       99999999999777777775        8888998     899999999


Q ss_pred             HHHHHHhHhHHH
Q psy5048         273 IRAQHQRGHMIT  284 (319)
Q Consensus       273 ~l~~~~k~~~~k  284 (319)
                      .++++..+..++
T Consensus       124 ~~~~~~~~~~e~  135 (137)
T 3q49_B          124 IAKKKRWNSIEE  135 (137)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHh
Confidence            999887766554

>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.25  E-value=0.011  Score=45.85  Aligned_cols=109  Identities=8%  Similarity=-0.048  Sum_probs=72.5

Q ss_pred             hhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCC
Q psy5048         158 DRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQS  237 (319)
Q Consensus       158 a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~  237 (319)
                      +......|..++..+++..+... ..+..  ...|...........+-.++.....+..++..|..++..+|       +
T Consensus        28 ~~~~~~~a~~~~~~~~~~~A~~~-~~~a~--~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-------~   97 (148)
T 2dba_A           28 VEQLRKEGNELFKCGDYGGALAA-YTQAL--GLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDG-------G   97 (148)
T ss_dssp             HHHHHHHHHHHHTTTCHHHHHHH-HHHHH--TSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTS-------C
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHH-HHHHH--HHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCc-------c
Confidence            44455566666666666443321 11111  11122212223333333455677899999999999999988       9


Q ss_pred             ChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048         238 TIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ  276 (319)
Q Consensus       238 NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~  276 (319)
                      |..++|++|..+..+++++        +++++|.+.++...+..+.+
T Consensus        98 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~  144 (148)
T 2dba_A           98 DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISG  144 (148)
T ss_dssp             CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence            9999999999777677775        88999999999988887754

>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*

Probab=96.12  E-value=0.01  Score=47.89  Aligned_cols=68  Identities=9%  Similarity=-0.161  Sum_probs=54.7

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++..+..+..|+..+.++++.+|       +|..|++.+|..+..+++++        +++++|++.++...|..+-.+.
T Consensus        40 ~y~~~~~~~~A~~~~~~al~~~p-------~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~  112 (150)
T 4ga2_A           40 LYYEAKEYDLAKKYICTYINVQE-------RDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKN  112 (150)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence            45677888889999999999888       99999999999777777775        8889999988888877765554


Q ss_pred             hHh
Q psy5048         279 RGH  281 (319)
Q Consensus       279 k~~  281 (319)
                      ...
T Consensus       113 ~~~  115 (150)
T 4ga2_A          113 DVT  115 (150)
T ss_dssp             CSS
T ss_pred             CCh
Confidence            443

>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}

Probab=95.82  E-value=0.02  Score=50.88  Aligned_cols=72  Identities=10%  Similarity=-0.012  Sum_probs=61.9

Q ss_pred             hHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHH
Q psy5048         204 CSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRA  275 (319)
Q Consensus       204 ~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~  275 (319)
                      +-.++.....+..|+..+..+++.+|       +|..+++++|..+...++++        +++++|++..+...|.++.
T Consensus       278 la~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~  350 (359)
T 3ieg_A          278 ICHCFSKDEKPVEAIRICSEVLQMEP-------DNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQ  350 (359)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred             HHHHHHHccCHHHHHHHHHHHHHhCc-------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Confidence            33456777899999999999999988       99999999999777777775        9999999999999999998


Q ss_pred             HHHhHhH
Q psy5048         276 QHQRGHM  282 (319)
Q Consensus       276 ~~~k~~~  282 (319)
                      ..++...
T Consensus       351 ~~~~~~~  357 (359)
T 3ieg_A          351 RLLKQSQ  357 (359)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhc
Confidence            8877553

>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2

Probab=95.27  E-value=0.017  Score=51.79  Aligned_cols=105  Identities=13%  Similarity=0.111  Sum_probs=67.5

Q ss_pred             hhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCCC
Q psy5048         159 RRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQST  238 (319)
Q Consensus       159 ~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~N  238 (319)
                      ......|+.++..+++..+...- .+...  ..|...   .++...-.++..+..+..|+..+..++..+|       +|
T Consensus         5 ~~~~~~g~~~~~~g~~~~A~~~~-~~al~--~~p~~~---~~~~~la~~~~~~~~~~~A~~~~~~al~~~p-------~~   71 (281)
T 2c2l_A            5 QELKEQGNRLFVGRKYPEAAACY-GRAIT--RNPLVA---VYYTNRALCYLKMQQPEQALADCRRALELDG-------QS   71 (281)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHH-HHHHH--HCSCCH---HHHHHHHHHHHHTTCHHHHHHHHHHHTTSCT-------TC
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHH-HHHHH--hCCccH---HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-------CC
Confidence            34555667766666665433211 11111  111111   2333333456777999999999999999998       99


Q ss_pred             hhHHHHHHHHHHhcCccc--------cccCCCCh-----hhHHHHHHHHHH
Q psy5048         239 IPAWTHDYTRLALLLPFL--------QYEFPPEQ-----SQCLPLLGIRAQ  276 (319)
Q Consensus       239 vKALfRrg~~~~~~~~~~--------a~~~dP~n-----~~i~~el~~l~~  276 (319)
                      ++|+|++|..+..++.++        +++++|++     ..+...++..+.
T Consensus        72 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~  122 (281)
T 2c2l_A           72 VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKK  122 (281)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHHHHHHH
Confidence            999999999887778776        88888876     455555544433

>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}

Probab=95.13  E-value=0.071  Score=45.03  Aligned_cols=65  Identities=9%  Similarity=-0.130  Sum_probs=55.6

Q ss_pred             hHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHH
Q psy5048         204 CSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRA  275 (319)
Q Consensus       204 ~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~  275 (319)
                      +-.++.....+..|+..+..+++.+|       +|+.|++.+|..+...++++        +++++|+|.++...|..+-
T Consensus        60 lg~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~  132 (208)
T 3urz_A           60 LALAYKKNRNYDKAYLFYKELLQKAP-------NNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYY  132 (208)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence            33456777999999999999999999       99999999999777777775        8999999999888877654

>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}

Probab=95.08  E-value=0.048  Score=42.60  Aligned_cols=80  Identities=8%  Similarity=-0.052  Sum_probs=62.5

Q ss_pred             HHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048         206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH  277 (319)
Q Consensus       206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~  277 (319)
                      +++...+.+..|+...+++++.+|       +|..+++.+|..+..+++++        |+++||.+..+...+..+-..
T Consensus        21 ~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~   93 (126)
T 4gco_A           21 NEYFKKGDYPTAMRHYNEAVKRDP-------ENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA   93 (126)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Confidence            355677899999999999999999       99999999999887778876        999999999888877777665


Q ss_pred             HhHhHHHHHHHHHhcc
Q psy5048         278 QRGHMITQGSLYFFLF  293 (319)
Q Consensus       278 ~k~~~~kek~~y~~mF  293 (319)
                      .....+ -.+.|....
T Consensus        94 ~~~~~~-A~~~~~~al  108 (126)
T 4gco_A           94 MREWSK-AQRAYEDAL  108 (126)
T ss_dssp             TTCHHH-HHHHHHHHH
T ss_pred             CCCHHH-HHHHHHHHH
Confidence            554432 333444433

>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1

Probab=95.01  E-value=0.012  Score=49.70  Aligned_cols=28  Identities=25%  Similarity=0.322  Sum_probs=24.8

Q ss_pred             cccCCCCCCCCCCCCCCCCCCeeecccceEEE
Q psy5048           7 LPFGENRNPFYKTPCIRPRSTLSLSPYSLSLI   38 (319)
Q Consensus         7 ~~~g~~g~~~~~~p~Ipp~atl~~d~~lv~~~   38 (319)
                      ++||+.|.|    |.||||++|.|+++++++.
T Consensus       115 laYG~~g~~----~~Ipp~s~LiF~VeL~~i~  142 (167)
T 1jvw_A          115 LAYGVTGGG----GMIPPYSPLEFDVELISIK  142 (167)
T ss_dssp             GTTTTTCSS----SSSCTTCCEEEEEEEEEEG
T ss_pred             hhCCCCCCC----CCcCCCCeEEEEEEEEEEE
Confidence            579998877    7999999999999999864

>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3

Probab=95.00  E-value=0.047  Score=53.03  Aligned_cols=109  Identities=8%  Similarity=-0.043  Sum_probs=76.4

Q ss_pred             hhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCC
Q psy5048         157 WDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQ  236 (319)
Q Consensus       157 ~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~  236 (319)
                      .+......|+.++..+++..+... ..+....  .|..   ......+-.++..+.++..|+..+.++++.+|       
T Consensus         5 ~a~~~~~lg~~~~~~g~~~~A~~~-~~~Al~~--~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p-------   71 (477)
T 1wao_1            5 RAEELKTQANDYFKAKDYENAIKF-YSQAIEL--NPSN---AIYYGNRSLAYLRTECYGYALGDATRAIELDK-------   71 (477)
T ss_dssp             HHTTSSSSSSSTTTTTCHHHHHHH-HHHHHHH--CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCT-------
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHh--CCcc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-------
Confidence            345566778888888877654421 1111111  1111   12233333456778999999999999999998       


Q ss_pred             CChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         237 STIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       237 ~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      +|..++|++|..+..+++++        |++++|++.++...|..+....
T Consensus        72 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~  121 (477)
T 1wao_1           72 KYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIV  121 (477)
T ss_dssp             TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence            99999999999777777775        8999999999988888775443

>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A

Probab=94.89  E-value=0.038  Score=43.57  Aligned_cols=69  Identities=7%  Similarity=-0.146  Sum_probs=54.8

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++..+..+..|+..+..++..+|       +|..++|.+|..+..+++++        +++++|.+.+......++...+
T Consensus        61 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l  133 (142)
T 2xcb_A           61 CRQSLGLYEQALQSYSYGALMDI-------NEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAML  133 (142)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHH
T ss_pred             HHHHHhhHHHHHHHHHHHHhcCC-------CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence            55677899999999999999998       99999999999877778875        8888898877665555555554


Q ss_pred             hHhH
Q psy5048         279 RGHM  282 (319)
Q Consensus       279 k~~~  282 (319)
                      +...
T Consensus       134 ~~l~  137 (142)
T 2xcb_A          134 EAVT  137 (142)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4443

>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1

Probab=94.89  E-value=0.056  Score=39.54  Aligned_cols=63  Identities=13%  Similarity=-0.019  Sum_probs=53.4

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ  276 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~  276 (319)
                      ++.....+..++..+..++..+|       ++..+++..|..+..++++.        +++++|++..+...+..+.+
T Consensus        47 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~  117 (118)
T 1elw_A           47 AYAKKGDYQKAYEDGCKTVDLKP-------DWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA  117 (118)
T ss_dssp             HHHHHTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred             HHHhhccHHHHHHHHHHHHHhCc-------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence            45667889999999999999888       99999999999777777775        88999999998888877754

>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*

Probab=94.82  E-value=0.035  Score=44.62  Aligned_cols=63  Identities=8%  Similarity=-0.156  Sum_probs=52.0

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc---------cccCCCChhhHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL---------QYEFPPEQSQCLPLLGIRAQ  276 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~---------a~~~dP~n~~i~~el~~l~~  276 (319)
                      ++....++..|+.....+++.+|       +|..+++..|..+..++.+.         |++++|.|..+.....+|-.
T Consensus        74 ~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~  145 (150)
T 4ga2_A           74 LYELEENTDKAVECYRRSVELNP-------TQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLD  145 (150)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred             HHHHcCchHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence            55777899999999999999999       99999999999666555542         88999999998776665543

>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1

Probab=94.82  E-value=0.043  Score=45.91  Aligned_cols=66  Identities=12%  Similarity=-0.053  Sum_probs=50.9

Q ss_pred             cchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcC-----------ccc--------cccCCCChhhHHHHHHHH
Q psy5048         214 KTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLL-----------PFL--------QYEFPPEQSQCLPLLGIR  274 (319)
Q Consensus       214 ~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~-----------~~~--------a~~~dP~n~~i~~el~~l  274 (319)
                      ...|+..+.++|+.+|       ++..|+|..|.++..++           .|+        |++++|+|.....-|...
T Consensus        62 ~~eAi~~le~AL~ldP-------~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~  134 (158)
T 1zu2_A           62 IQEAITKFEEALLIDP-------KKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMT  134 (158)
T ss_dssp             HHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCc-------CcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence            5689999999999999       99999999999766442           443        999999998877777666


Q ss_pred             HHHHhHhHHHHH
Q psy5048         275 AQHQRGHMITQG  286 (319)
Q Consensus       275 ~~~~k~~~~kek  286 (319)
                      .+.-.-+..-.+
T Consensus       135 ~ka~el~~~~~~  146 (158)
T 1zu2_A          135 AKAPQLHAEAYK  146 (158)
T ss_dssp             HTHHHHHHHHHH
T ss_pred             HhCHhccCcccc
Confidence            655544444433

>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*

Probab=94.67  E-value=0.042  Score=44.19  Aligned_cols=64  Identities=9%  Similarity=-0.073  Sum_probs=50.6

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH  277 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~  277 (319)
                      ++..+.++..|+..+..++..+|       +|..++|.+|..+..+++++        +++++|++.+......++...
T Consensus        64 ~~~~~g~~~~A~~~~~~al~l~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~  135 (148)
T 2vgx_A           64 CRQAMGQYDLAIHSYSYGAVMDI-------XEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSM  135 (148)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHST-------TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred             HHHHHhhHHHHHHHHHHHHhcCC-------CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHH
Confidence            55777899999999999999998       99999999999777777775        888888876654444443333

>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A

Probab=94.62  E-value=0.085  Score=41.45  Aligned_cols=113  Identities=9%  Similarity=-0.041  Sum_probs=73.4

Q ss_pred             ccchhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccc
Q psy5048         153 KFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTF  232 (319)
Q Consensus       153 ek~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~  232 (319)
                      .....+......|..++..+++..+...- .+.....  |..   ......+-.++.....+..|+..+..++..+|   
T Consensus         8 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~-~~al~~~--~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~---   78 (166)
T 1a17_A            8 GALKRAEELKTQANDYFKAKDYENAIKFY-SQAIELN--PSN---AIYYGNRSLAYLRTECYGYALGDATRAIELDK---   78 (166)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHHS--TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---
T ss_pred             hHHHHHHHHHHHHHHHHHccCHHHHHHHH-HHHHHhC--CCC---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc---
Confidence            34455666667777776666665433211 1111111  111   11222222345667889999999999999988   


Q ss_pred             cCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         233 ARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       233 ~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                          +|..++++.|..+..++++.        +++++|.+..+...+..+....
T Consensus        79 ----~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~  128 (166)
T 1a17_A           79 ----KYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIV  128 (166)
T ss_dssp             ----TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred             ----ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence                99999999999777777775        8899999988886666664433

>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1

Probab=94.57  E-value=0.083  Score=40.82  Aligned_cols=77  Identities=9%  Similarity=-0.084  Sum_probs=58.7

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhH
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRG  280 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~  280 (319)
                      .....+..|+..+..++..+|       +|..|+|..|..+...+.+.        |++++|++.++...|..+-.....
T Consensus        28 ~~~g~~~~A~~~~~~al~~~P-------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~  100 (121)
T 1hxi_A           28 LKLANLAEAALAFEAVCQKEP-------EREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHN  100 (121)
T ss_dssp             HHTTCHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred             HHcCCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence            456788899999999999999       99999999999777777775        899999999988877776655444


Q ss_pred             hHHHHHHHHHhcc
Q psy5048         281 HMITQGSLYFFLF  293 (319)
Q Consensus       281 ~~~kek~~y~~mF  293 (319)
                      ..+ -...|....
T Consensus       101 ~~~-A~~~~~~al  112 (121)
T 1hxi_A          101 ANA-ALASLRAWL  112 (121)
T ss_dssp             HHH-HHHHHHHHH
T ss_pred             HHH-HHHHHHHHH
Confidence            332 233444433

>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.41  E-value=0.026  Score=45.66  Aligned_cols=31  Identities=19%  Similarity=0.288  Sum_probs=25.6

Q ss_pred             cccCCCC-CCCCCCCCCCCCCCeeecccceEEEEee
Q psy5048           7 LPFGENR-NPFYKTPCIRPRSTLSLSPYSLSLILPR   41 (319)
Q Consensus         7 ~~~g~~g-~~~~~~p~Ipp~atl~~d~~lv~~~i~~   41 (319)
                      ++||..| .+    +.||||++|.|+++++++....
T Consensus        94 ~aYG~~~~~~----~~Ip~~~~l~f~vel~~v~~~~  125 (135)
T 2d9f_A           94 YCYGPQGSRS----PYIPPHAALCLEVTLKTAVDRP  125 (135)
T ss_dssp             HHTCTTCCSS----SCCCTTCCEEEEEEEEEEESSC
T ss_pred             HccCcCCcCC----CccCCCCeEEEEEEEEEeecCC
Confidence            4689888 66    7899999999999999876433

>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}

Probab=94.41  E-value=0.047  Score=39.73  Aligned_cols=53  Identities=8%  Similarity=-0.102  Sum_probs=46.0

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCChh-HHHHHHHHHHhcCccc--------cccCCCChhhHH
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIP-AWTHDYTRLALLLPFL--------QYEFPPEQSQCL  268 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvK-ALfRrg~~~~~~~~~~--------a~~~dP~n~~i~  268 (319)
                      .....+..|+..+..++..+|       +|.. ++|.+|..+..+++++        +++++|++..+.
T Consensus        11 ~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~   72 (99)
T 2kc7_A           11 INQGDIENALQALEEFLQTEP-------VGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ   72 (99)
T ss_dssp             HHHTCHHHHHHHHHHHHHHCS-------STHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred             HHcCCHHHHHHHHHHHHHHCC-------CcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence            456788899999999999998       9999 9999999777677775        889999998876

>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}

Probab=94.24  E-value=0.023  Score=43.38  Aligned_cols=27  Identities=33%  Similarity=0.479  Sum_probs=23.5

Q ss_pred             cccCCCCCCCCCCCCCCCCCCeeecccceEE
Q psy5048           7 LPFGENRNPFYKTPCIRPRSTLSLSPYSLSL   37 (319)
Q Consensus         7 ~~~g~~g~~~~~~p~Ipp~atl~~d~~lv~~   37 (319)
                      ++||+.|.+    +.||||++|.|+++++++
T Consensus        70 ~ayG~~~~~----~~Ip~~~~l~f~v~l~~v   96 (102)
T 2pbc_A           70 LGYGERGAP----PKIPGGATLVFEVELLKI   96 (102)
T ss_dssp             GTTTTTCBT----TTBCTTCCEEEEEEEEEE
T ss_pred             HCcCCCCCC----CCcCcCCeEEEEEEEEEe
Confidence            568988876    689999999999999876

>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A

Probab=93.96  E-value=0.14  Score=36.06  Aligned_cols=63  Identities=16%  Similarity=0.054  Sum_probs=51.9

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ  276 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~  276 (319)
                      ++.....+..|+..+..++..+|       ++..+++..|..+...++++        +++++|.+..+...|..+-.
T Consensus        18 ~~~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~   88 (91)
T 1na3_A           18 AYYKQGDYDEAIEYYQKALELDP-------NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ   88 (91)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred             HHHHccCHHHHHHHHHHHHhcCC-------CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence            34566888999999999999888       99999999999777777775        88899999888777765543

>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A

Probab=93.86  E-value=0.13  Score=41.62  Aligned_cols=65  Identities=5%  Similarity=-0.172  Sum_probs=39.6

Q ss_pred             HHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048         206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH  277 (319)
Q Consensus       206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~  277 (319)
                      .++..++.+..|+..+.++++.+|       +|+.|++.+|..+...++++        ++..+|.+..+...+..+-..
T Consensus        13 ~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (184)
T 3vtx_A           13 DKKRTKGDFDGAIRAYKKVLKADP-------NNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFM   85 (184)
T ss_dssp             HHHHHHTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Confidence            344556667777777777777666       77777777777555555553        555666665555554444433

>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}

Probab=93.64  E-value=0.21  Score=36.44  Aligned_cols=52  Identities=10%  Similarity=0.005  Sum_probs=43.6

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChh
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQS  265 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~  265 (319)
                      ++....++..|+..+..++..+|       +|..+++.+|..+..+++++        +++++|++.
T Consensus        13 ~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~   72 (111)
T 2l6j_A           13 SLFKQGLYREAVHCYDQLITAQP-------QNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAE   72 (111)
T ss_dssp             HHHTTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTT
T ss_pred             HHHHcCCHHHHHHHHHHHHhcCC-------CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcc
Confidence            34556888899999999999888       99999999999777777775        889999983

>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A

Probab=93.52  E-value=0.1  Score=38.85  Aligned_cols=69  Identities=6%  Similarity=-0.123  Sum_probs=55.6

Q ss_pred             HHHHHhcccchhHhHHhhhhccccccccCCCCC-------hhHHHHHHHHHHhcCccc--------cccCCCChhhHHHH
Q psy5048         206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQST-------IPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPL  270 (319)
Q Consensus       206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~N-------vKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~e  270 (319)
                      .++.....+..|+..+..++...|       ++       ..++++.|..+...++++        +++++| +.++...
T Consensus        46 ~~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~  117 (131)
T 1elr_A           46 AVYFEKGDYNKCRELCEKAIEVGR-------ENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKK  117 (131)
T ss_dssp             HHHHHHTCHHHHHHHHHHHHHHHH-------HSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHH
T ss_pred             HHHHHhccHHHHHHHHHHHHhhcc-------ccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHH
Confidence            345667889999999999999887       66       999999999777777775        888889 6888888


Q ss_pred             HHHHHHHHhHhH
Q psy5048         271 LGIRAQHQRGHM  282 (319)
Q Consensus       271 l~~l~~~~k~~~  282 (319)
                      +..+.+.+++..
T Consensus       118 l~~~~~~~~~~~  129 (131)
T 1elr_A          118 CQQAEKILKEQE  129 (131)
T ss_dssp             HHHHHHHHHHC-
T ss_pred             HHHHHHHHHHhh
Confidence            888877766543

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=93.41  E-value=0.22  Score=46.15  Aligned_cols=70  Identities=10%  Similarity=-0.004  Sum_probs=59.2

Q ss_pred             hHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHH
Q psy5048         204 CSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRA  275 (319)
Q Consensus       204 ~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~  275 (319)
                      +..++.....+..|+..|..+++.+|       +|..+++.+|..+...++++        +++++|++..+...|..+.
T Consensus       301 l~~~~~~~g~~~~A~~~~~~a~~~~p-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~  373 (450)
T 2y4t_A          301 ICHCFSKDEKPVEAIRVCSEVLQMEP-------DNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQ  373 (450)
T ss_dssp             HHHHHHTTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHhCc-------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence            33455667889999999999999888       99999999999887777776        8899999999999998877


Q ss_pred             HHHhH
Q psy5048         276 QHQRG  280 (319)
Q Consensus       276 ~~~k~  280 (319)
                      ...+.
T Consensus       374 ~~~~~  378 (450)
T 2y4t_A          374 RLLKQ  378 (450)
T ss_dssp             HHHHH
T ss_pred             HHhhc
Confidence            66544

>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1

Probab=93.38  E-value=0.043  Score=44.36  Aligned_cols=28  Identities=21%  Similarity=0.316  Sum_probs=24.9

Q ss_pred             cccCCCCCCCCCCCCCCCCCCeeecccceEEE
Q psy5048           7 LPFGENRNPFYKTPCIRPRSTLSLSPYSLSLI   38 (319)
Q Consensus         7 ~~~g~~g~~~~~~p~Ipp~atl~~d~~lv~~~   38 (319)
                      ++||+.|.|    +.||||++|.|+++++++.
T Consensus        94 ~aYG~~g~~----~~Ip~~~~l~f~v~l~~i~  121 (135)
T 1r9h_A           94 YGYGDAGSP----PKIPGGATLIFEVELFEWS  121 (135)
T ss_dssp             GTTTTTCBT----TTBCTTCCEEEEEEEEEEE
T ss_pred             HcCCCCCCC----CCcCcCCcEEEEEEEEEee
Confidence            579999987    7899999999999999874

>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}

Probab=93.32  E-value=0.27  Score=37.21  Aligned_cols=68  Identities=10%  Similarity=0.059  Sum_probs=56.2

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++.....+..|+.....++..+|       +|..+++.+|..+..+++++        +++++|.+..+...+..+-...
T Consensus        13 ~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~   85 (126)
T 3upv_A           13 EYFTKSDWPNAVKAYTEMIKRAP-------EDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAV   85 (126)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred             HHHHhcCHHHHHHHHHHHHHhCC-------CChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Confidence            34566889999999999999999       99999999999777777776        8999999988877777766555


Q ss_pred             hHh
Q psy5048         279 RGH  281 (319)
Q Consensus       279 k~~  281 (319)
                      ...
T Consensus        86 ~~~   88 (126)
T 3upv_A           86 KEY   88 (126)
T ss_dssp             TCH
T ss_pred             hCH
Confidence            443

>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A

Probab=93.22  E-value=0.12  Score=42.05  Aligned_cols=63  Identities=5%  Similarity=-0.155  Sum_probs=41.3

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ....++..|+..+..++..+|       +|..+++-+|..+..++.|+        |++++|++..+..-|..+-.+.
T Consensus        47 ~~~g~~~eA~~~~~~al~~~P-------~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~l  117 (151)
T 3gyz_A           47 YNKGRIEEAEVFFRFLCIYDF-------YNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRL  117 (151)
T ss_dssp             HHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHT
T ss_pred             HHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHc
Confidence            445666777777777777776       77777777777665566664        6667777766666555554443

>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}

Probab=93.20  E-value=0.12  Score=39.17  Aligned_cols=63  Identities=6%  Similarity=-0.191  Sum_probs=51.0

Q ss_pred             hHHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHH
Q psy5048         204 CSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGI  273 (319)
Q Consensus       204 ~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~  273 (319)
                      +-.++..+.++..|+..+..+++.+|       +|..++|..|..+..++.++        +++.+|.+.++..-.+.
T Consensus        33 lg~~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~a  103 (117)
T 3k9i_A           33 LGSTFRTLGEYRKAEAVLANGVKQFP-------NHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQA  103 (117)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHhCC-------CchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence            33456777999999999999999999       99999999999777777775        78889998877654333

>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}

Probab=93.09  E-value=0.18  Score=38.07  Aligned_cols=65  Identities=5%  Similarity=-0.290  Sum_probs=53.0

Q ss_pred             HHHHHhcccchhHhHHhhhhccccccccCCCCC---hhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHH
Q psy5048         206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQST---IPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIR  274 (319)
Q Consensus       206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~N---vKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l  274 (319)
                      .++....++..|+..+..++..+|       ++   ..++|..|..+..+++++        +++.+|++..+...+.+|
T Consensus        47 ~~~~~~~~~~~A~~~~~~~~~~~p-------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l  119 (129)
T 2xev_A           47 ESYYATRNFQLAEAQFRDLVSRYP-------THDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERL  119 (129)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHCT-------TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHH
T ss_pred             HHHHHhccHHHHHHHHHHHHHHCC-------CCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHH
Confidence            355677899999999999999888       88   889999999777777775        788899988777766666


Q ss_pred             HHH
Q psy5048         275 AQH  277 (319)
Q Consensus       275 ~~~  277 (319)
                      ...
T Consensus       120 ~~l  122 (129)
T 2xev_A          120 QSI  122 (129)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}

Probab=92.84  E-value=0.28  Score=39.16  Aligned_cols=68  Identities=9%  Similarity=-0.086  Sum_probs=57.1

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++.....+..|+.....+++.+|       +|..+++.+|..+..+++++        +++++|.+..+...|..+-...
T Consensus        20 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~   92 (164)
T 3sz7_A           20 AAMARKEYSKAIDLYTQALSIAP-------ANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDM   92 (164)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred             HHHHcCCHHHHHHHHHHHHHhCC-------cCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence            44667889999999999999999       99999999999777777776        9999999988888777776655


Q ss_pred             hHh
Q psy5048         279 RGH  281 (319)
Q Consensus       279 k~~  281 (319)
                      .++
T Consensus        93 g~~   95 (164)
T 3sz7_A           93 ADY   95 (164)
T ss_dssp             TCH
T ss_pred             cCH
Confidence            443

>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1

Probab=92.83  E-value=0.21  Score=36.99  Aligned_cols=66  Identities=18%  Similarity=0.160  Sum_probs=54.1

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++.....+..++..+..++..+|       ++..+++..|..+...++++        +++++|.+..+...+..+-.+.
T Consensus        55 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~  127 (131)
T 2vyi_A           55 AYSKLGNYAGAVQDCERAICIDP-------AYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKL  127 (131)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred             HHHHhhchHHHHHHHHHHHhcCc-------cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHH
Confidence            44667888999999999999888       99999999999777777775        8889999988887777766554


Q ss_pred             h
Q psy5048         279 R  279 (319)
Q Consensus       279 k  279 (319)
                      .
T Consensus       128 ~  128 (131)
T 2vyi_A          128 R  128 (131)
T ss_dssp             T
T ss_pred             h
Confidence            3

>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}

Probab=92.18  E-value=0.19  Score=37.58  Aligned_cols=64  Identities=9%  Similarity=0.092  Sum_probs=50.8

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH  277 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~  277 (319)
                      ++.....+..|+..+..++..+|       ++..+++..|..+...++++        +++++|.+..+...|..+-.+
T Consensus        59 ~~~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~  130 (133)
T 2lni_A           59 CYTKLLEFQLALKDCEECIQLEP-------TFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMA  130 (133)
T ss_dssp             HHTTTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHH
T ss_pred             HHHHhccHHHHHHHHHHHHHhCC-------CchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence            44556788889999999999888       89999999999777677775        788899988887777666543

>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A

Probab=92.03  E-value=0.25  Score=38.68  Aligned_cols=68  Identities=4%  Similarity=-0.295  Sum_probs=56.1

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++....++..|+..+..++..+|       +|..+++..|..+...++++        +++++|++..+...+..+-...
T Consensus        27 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~   99 (142)
T 2xcb_A           27 NQYQAGKWDDAQKIFQALCMLDH-------YDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQL   99 (142)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHT
T ss_pred             HHHHHccHHHHHHHHHHHHHhCC-------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHc
Confidence            34566889999999999999999       99999999999777778876        8899999998887777665554


Q ss_pred             hHh
Q psy5048         279 RGH  281 (319)
Q Consensus       279 k~~  281 (319)
                      ...
T Consensus       100 g~~  102 (142)
T 2xcb_A          100 GDL  102 (142)
T ss_dssp             TCH
T ss_pred             CCH
Confidence            443

>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A

Probab=92.01  E-value=0.26  Score=40.07  Aligned_cols=53  Identities=8%  Similarity=-0.052  Sum_probs=47.0

Q ss_pred             HHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChh
Q psy5048         206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQS  265 (319)
Q Consensus       206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~  265 (319)
                      .++..+.++..|+..+.+++..+|       +|..++|.+|..+..++.++        |++++|+..
T Consensus        78 ~~~~~~g~~~~Ai~~~~~al~l~P-------~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~  138 (151)
T 3gyz_A           78 AIYQIKEQFQQAADLYAVAFALGK-------NDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK  138 (151)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHSS-------SCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred             HHHHHHccHHHHHHHHHHHHhhCC-------CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence            366788999999999999999999       99999999999888888886        888999864

>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}

Probab=91.92  E-value=0.31  Score=45.70  Aligned_cols=109  Identities=8%  Similarity=-0.074  Sum_probs=72.6

Q ss_pred             cchhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhcccccccc
Q psy5048         154 FLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFA  233 (319)
Q Consensus       154 k~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~  233 (319)
                      +...+......|+.++..+++..+...- .+.....  |.    ......+-.++..+..+..|+..|..+++.+|    
T Consensus         2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~-~~al~~~--p~----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p----   70 (514)
T 2gw1_A            2 KDKYALALKDKGNQFFRNKKYDDAIKYY-NWALELK--ED----PVFYSNLSACYVSVGDLKKVVEMSTKALELKP----   70 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCHHHHHHHH-HHHHHHC--CC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCS----
T ss_pred             cchhHHHHHHHHHHHHHhccHHHHHHHH-HHHHhcC--cc----HHHHHhHHHHHHHHhhHHHHHHHHHHHhccCh----
Confidence            3456677788888888888776544311 1111111  21    12233333466778999999999999999999    


Q ss_pred             CCCCChhHHHHHHHHHHhcCccc--------cccCCCC-hhhHHHHHHHHHH
Q psy5048         234 RNQSTIPAWTHDYTRLALLLPFL--------QYEFPPE-QSQCLPLLGIRAQ  276 (319)
Q Consensus       234 ~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~-n~~i~~el~~l~~  276 (319)
                         +|+.|++++|..+..++.++        +++++|. +..+...+..+..
T Consensus        71 ---~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (514)
T 2gw1_A           71 ---DYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASIEPMLERNLN  119 (514)
T ss_dssp             ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGGGTHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCccchHHHHHHHHHH
Confidence               99999999999777777776        7788886 4444444444433

>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...

Probab=91.80  E-value=0.46  Score=44.73  Aligned_cols=64  Identities=6%  Similarity=-0.038  Sum_probs=48.8

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH  277 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~  277 (319)
                      ++..+..+..++..+.++|+.+|       +|.-|++.||..+..++.++        +++++|.|..+..-+..+-.+
T Consensus       175 ~~~~~g~~~eAl~~~~kal~ldP-------~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~  246 (382)
T 2h6f_A          175 LVEWLRDPSQELEFIADILNQDA-------KNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN  246 (382)
T ss_dssp             HHHHHTCCTTHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred             HHHHccCHHHHHHHHHHHHHhCc-------cCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence            44566778888888888888888       88888888888666666664        888888887777766666544

>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A

Probab=91.57  E-value=0.13  Score=41.71  Aligned_cols=60  Identities=8%  Similarity=-0.041  Sum_probs=31.0

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHH
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRA  275 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~  275 (319)
                      .....+..++..+..++..+|       +|..+++.+|..+..+++++        +++++|.+..+...|..+-
T Consensus        84 ~~~~~~~~a~~~~~~a~~~~~-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~  151 (184)
T 3vtx_A           84 FMIDEKQAAIDALQRAIALNT-------VYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAY  151 (184)
T ss_dssp             HHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred             HHcCCHHHHHHHHHHHHHhCc-------cchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHH
Confidence            334445555555555555555       55555555555444444443        5555555555554444443

>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...

Probab=91.31  E-value=0.26  Score=46.46  Aligned_cols=80  Identities=9%  Similarity=-0.062  Sum_probs=60.9

Q ss_pred             HHHHhcc-cchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048         207 AYALLVK-KTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH  277 (319)
Q Consensus       207 ~~~~~~~-~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~  277 (319)
                      ++..+.+ +..++..+..++..+|       +|..|++.||..+..++.++        |+++||.|..+..-+..+-.+
T Consensus       140 ~l~~~g~d~~eAl~~~~~al~l~P-------~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~  212 (382)
T 2h6f_A          140 LLKSLQKDLHEEMNYITAIIEEQP-------KNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQE  212 (382)
T ss_dssp             HHHHTTCCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred             HHHHcccCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHH
Confidence            4455675 9999999999999999       99999999999777777775        999999998888877777666


Q ss_pred             HhHhHHHHHHHHHhccc
Q psy5048         278 QRGHMITQGSLYFFLFY  294 (319)
Q Consensus       278 ~k~~~~kek~~y~~mF~  294 (319)
                      ..... +.-..|..+..
T Consensus       213 ~g~~~-eAl~~~~~al~  228 (382)
T 2h6f_A          213 FKLWD-NELQYVDQLLK  228 (382)
T ss_dssp             HTCCT-THHHHHHHHHH
T ss_pred             cCChH-HHHHHHHHHHH
Confidence            55432 23334444433

>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}

Probab=90.95  E-value=0.13  Score=43.31  Aligned_cols=38  Identities=5%  Similarity=-0.170  Sum_probs=32.1

Q ss_pred             HHHHHhcccchhHhHHhhhhccccccccCCCC--ChhHHHHHHHHHH
Q psy5048         206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQS--TIPAWTHDYTRLA  250 (319)
Q Consensus       206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~--NvKALfRrg~~~~  250 (319)
                      .++..+..+..|+..+.++++.+|       +  |..|++..|..+.
T Consensus       125 ~~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~~~l~~~~~  164 (228)
T 4i17_A          125 QKFQQAGNIEKAEENYKHATDVTS-------KKWKTDALYSLGVLFY  164 (228)
T ss_dssp             HHHHHTTCHHHHHHHHHHHTTSSC-------HHHHHHHHHHHHHHHH
T ss_pred             HHHHHhccHHHHHHHHHHHHhcCC-------CcccHHHHHHHHHHHH
Confidence            355667889999999999999998       9  9999999988443

>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A

Probab=90.84  E-value=0.24  Score=36.54  Aligned_cols=43  Identities=7%  Similarity=-0.199  Sum_probs=37.7

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL  256 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~  256 (319)
                      ++....++..|+..+..+++.+|       +|..|+|.+|..+..+++++
T Consensus        16 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~a~~~lg~~~~~~g~~~   58 (100)
T 3ma5_A           16 EHLKHDNASRALALFEELVETDP-------DYVGTYYHLGKLYERLDRTD   58 (100)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHST-------TCTHHHHHHHHHHHHTTCHH
T ss_pred             HHHHcCCHHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHcCCHH
Confidence            45667889999999999999999       99999999999887777775

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*

Probab=90.71  E-value=0.33  Score=49.92  Aligned_cols=63  Identities=6%  Similarity=-0.148  Sum_probs=36.8

Q ss_pred             hcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhH
Q psy5048         211 LVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRG  280 (319)
Q Consensus       211 ~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~  280 (319)
                      +.++..|+..+.++++.+|       +|..|++.+|..+..++.++        |++++|++.++...|..+-..+.+
T Consensus        90 ~g~~~~A~~~~~kAl~l~P-------~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~  160 (723)
T 4gyw_A           90 MQDVQGALQCYTRAIQINP-------AFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCD  160 (723)
T ss_dssp             TTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred             cCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhccc
Confidence            3555556666666666555       66666666666555555554        666666666666666555554443

>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*

Probab=90.68  E-value=0.74  Score=36.59  Aligned_cols=68  Identities=1%  Similarity=-0.313  Sum_probs=55.9

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++....++..|+.....++..+|       +|..+++.+|..+...+.++        |++++|++..+...|..+-...
T Consensus        30 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~  102 (148)
T 2vgx_A           30 NQYQSGXYEDAHXVFQALCVLDH-------YDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQX  102 (148)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHT
T ss_pred             HHHHcCChHHHHHHHHHHHHcCc-------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHc
Confidence            34566889999999999999999       99999999999777778876        8899999998887777665544


Q ss_pred             hHh
Q psy5048         279 RGH  281 (319)
Q Consensus       279 k~~  281 (319)
                      ...
T Consensus       103 g~~  105 (148)
T 2vgx_A          103 GEL  105 (148)
T ss_dssp             TCH
T ss_pred             CCH
Confidence            433

>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}

Probab=90.67  E-value=0.9  Score=38.29  Aligned_cols=65  Identities=8%  Similarity=-0.217  Sum_probs=55.1

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++....++..|+..+..++..+|       +|..|+|.+|..+...++++        +++++|++.++...|..+-...
T Consensus        14 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~   86 (217)
T 2pl2_A           14 QLYALGRYDAALTLFERALKENP-------QDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVAL   86 (217)
T ss_dssp             HHHHTTCHHHHHHHHHHHHTTSS-------SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence            34566888999999999999999       99999999999777777775        8899999999888887776655

>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}

Probab=90.02  E-value=0.37  Score=37.28  Aligned_cols=54  Identities=11%  Similarity=-0.124  Sum_probs=46.4

Q ss_pred             HHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhh
Q psy5048         206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQ  266 (319)
Q Consensus       206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~  266 (319)
                      +++-....+..|+...+++++.+|       +|+-+++.+|..+..+++|+        |++++|++..
T Consensus        16 ~~~~~~~~~~~A~~~y~~Al~~~p-------~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~   77 (127)
T 4gcn_A           16 NAAYKQKDFEKAHVHYDKAIELDP-------SNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRA   77 (127)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccch
Confidence            355677899999999999999999       99999999999888788886        8888888643

>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}

Probab=89.80  E-value=0.72  Score=34.24  Aligned_cols=79  Identities=6%  Similarity=-0.014  Sum_probs=59.8

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++.....+..|+..+..++..+|       +|..+++.+|..+...++++        +++++|.+..+...+..+-.+.
T Consensus        25 ~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~   97 (133)
T 2lni_A           25 ECFQKGDYPQAMKHYTEAIKRNP-------KDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAM   97 (133)
T ss_dssp             HHHHTTCSHHHHHHHHHHHTTCT-------TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred             HHHHcCCHHHHHHHHHHHHHcCC-------CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Confidence            34567889999999999999888       99999999999877777775        8889999988888887776555


Q ss_pred             hHhHHHHHHHHHhcc
Q psy5048         279 RGHMITQGSLYFFLF  293 (319)
Q Consensus       279 k~~~~kek~~y~~mF  293 (319)
                      .... +-.+.|....
T Consensus        98 ~~~~-~A~~~~~~~~  111 (133)
T 2lni_A           98 KDYT-KAMDVYQKAL  111 (133)
T ss_dssp             TCHH-HHHHHHHHHH
T ss_pred             hhHH-HHHHHHHHHH
Confidence            4433 2233444433

>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*

Probab=89.77  E-value=0.93  Score=34.25  Aligned_cols=68  Identities=9%  Similarity=-0.121  Sum_probs=56.3

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++.....+..|+.....++..+|       +|..+++.+|..+...+++.        +++++|.+..+...|..+-...
T Consensus        18 ~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~   90 (137)
T 3q49_B           18 RLFVGRKYPEAAACYGRAITRNP-------LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEM   90 (137)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred             HHHHhCcHHHHHHHHHHHHhhCc-------CcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH
Confidence            44567888999999999999998       99999999999777777775        8899999988888877776665


Q ss_pred             hHh
Q psy5048         279 RGH  281 (319)
Q Consensus       279 k~~  281 (319)
                      ...
T Consensus        91 ~~~   93 (137)
T 3q49_B           91 ESY   93 (137)
T ss_dssp             TCH
T ss_pred             hhH
Confidence            443

>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}

Probab=89.43  E-value=0.35  Score=36.38  Aligned_cols=65  Identities=5%  Similarity=-0.111  Sum_probs=50.9

Q ss_pred             hcccchhHhHHhhhhcc---ccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHh
Q psy5048         211 LVKKTPSIHNCFLLSTK---SMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQR  279 (319)
Q Consensus       211 ~~~~~~a~~~c~~vl~~---~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k  279 (319)
                      +..+..|+.....+++.   +|       ++..+++..|..+..+++++        +++++|++..+...|..+-....
T Consensus         3 ~g~~~~A~~~~~~al~~~~~~p-------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g   75 (117)
T 3k9i_A            3 LGLEAQAVPYYEKAIASGLQGK-------DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLG   75 (117)
T ss_dssp             ----CCCHHHHHHHHSSCCCHH-------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred             CCcHHHHHHHHHHHHHcCCCCc-------cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcC
Confidence            35677899999999998   67       99999999999777778886        89999999998888877765554


Q ss_pred             HhH
Q psy5048         280 GHM  282 (319)
Q Consensus       280 ~~~  282 (319)
                      ...
T Consensus        76 ~~~   78 (117)
T 3k9i_A           76 RYE   78 (117)
T ss_dssp             CHH
T ss_pred             CHH
Confidence            443

>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}

Probab=89.14  E-value=1  Score=36.08  Aligned_cols=59  Identities=5%  Similarity=-0.115  Sum_probs=40.6

Q ss_pred             Hhccc--chhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHH
Q psy5048         210 LLVKK--TPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRA  275 (319)
Q Consensus       210 ~~~~~--~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~  275 (319)
                      ....+  ..++..+..++..+|       +|..+++..|..+...++++        +++++|.+.+....+..+.
T Consensus        91 ~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~  159 (177)
T 2e2e_A           91 QASQHMTAQTRAMIDKALALDS-------NEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESIN  159 (177)
T ss_dssp             HTTTCCCHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHH
T ss_pred             hcCCcchHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Confidence            44555  777888888887777       78888888888666666664        7778887766554444443

>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}

Probab=89.11  E-value=0.35  Score=40.55  Aligned_cols=56  Identities=7%  Similarity=-0.066  Sum_probs=48.6

Q ss_pred             HHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhH
Q psy5048         205 SSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQC  267 (319)
Q Consensus       205 ~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i  267 (319)
                      -.++..+..+..|+..+..++..+|       +|..+++.+|..+..+++++        +++++|.+..+
T Consensus        49 ~~~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~  112 (228)
T 4i17_A           49 GVCADNIKKYKEAADYFDIAIKKNY-------NLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATI  112 (228)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHTTC-------SHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred             HHHHHHhhcHHHHHHHHHHHHHhCc-------chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHH
Confidence            3456777999999999999999998       99999999999777778876        88999999854

>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}

Probab=88.96  E-value=0.38  Score=40.33  Aligned_cols=63  Identities=11%  Similarity=0.077  Sum_probs=35.6

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ  276 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~  276 (319)
                      ++.....+..|+..+..+++.+|       +|..+++.+|..+...++++        +++++|.+..+...+..+-.
T Consensus       148 ~~~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~  218 (258)
T 3uq3_A          148 EYFTKSDWPNAVKAYTEMIKRAP-------EDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQI  218 (258)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred             HHHHhcCHHHHHHHHHHHHhcCc-------ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            33444566666666666666655       66666666666554455543        55566666555544444433

>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1

Probab=88.23  E-value=1.4  Score=31.67  Aligned_cols=80  Identities=4%  Similarity=-0.119  Sum_probs=59.2

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++.....+..++..+..++..+|       +|..+++..|..+...++++        +++++|.+..+...+..+-...
T Consensus        13 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~   85 (118)
T 1elw_A           13 KALSVGNIDDALQCYSEAIKLDP-------HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFL   85 (118)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred             HHHHcccHHHHHHHHHHHHHHCC-------CcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHH
Confidence            33556888899999999999888       99999999999776667775        8889999988887777766554


Q ss_pred             hHhHHHHHHHHHhccc
Q psy5048         279 RGHMITQGSLYFFLFY  294 (319)
Q Consensus       279 k~~~~kek~~y~~mF~  294 (319)
                      ... .+-.+.|.....
T Consensus        86 ~~~-~~A~~~~~~~~~  100 (118)
T 1elw_A           86 NRF-EEAKRTYEEGLK  100 (118)
T ss_dssp             TCH-HHHHHHHHHHHT
T ss_pred             hhH-HHHHHHHHHHHH
Confidence            432 333444554443

>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}

Probab=87.89  E-value=1  Score=32.14  Aligned_cols=63  Identities=10%  Similarity=-0.140  Sum_probs=47.5

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCC--hhhHHHHHHHHHHHH
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPE--QSQCLPLLGIRAQHQ  278 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~--n~~i~~el~~l~~~~  278 (319)
                      .....+..|+.....++..+|       .+..+++.+|..+..++.++        +++++|.  +..+...+..+-.+.
T Consensus        17 ~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~   89 (112)
T 2kck_A           17 YDAGNYTESIDLFEKAIQLDP-------EESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYI   89 (112)
T ss_dssp             HSSCCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTC
T ss_pred             HHhhhHHHHHHHHHHHHHhCc-------CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHH
Confidence            445677788888888888888       88999999998776667765        7888888  777766666554443

>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}

Probab=87.77  E-value=0.62  Score=33.72  Aligned_cols=44  Identities=11%  Similarity=-0.127  Sum_probs=36.5

Q ss_pred             HHHHHhcccchhHhHHhhhhccccccccCCCCC------hhHHHHHHHHHHhcCccc
Q psy5048         206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQST------IPAWTHDYTRLALLLPFL  256 (319)
Q Consensus       206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~N------vKALfRrg~~~~~~~~~~  256 (319)
                      .++..+..+..|+..|..++..+|       +|      .+++|++|..+..++.+.
T Consensus        46 ~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (111)
T 2l6j_A           46 MALIKLGEYTQAIQMCQQGLRYTS-------TAEHVAIRSKLQYRLELAQGAVGSVQ   95 (111)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHTSCS-------STTSHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHhcCHHHHHHHHHHHHHhCC-------CccHHHHHHHHHHHHHHHHHHHHhHh
Confidence            355777999999999999999998       88      999999999666555443

>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1

Probab=87.77  E-value=0.35  Score=37.14  Aligned_cols=53  Identities=11%  Similarity=-0.199  Sum_probs=38.9

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhh
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQ  266 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~  266 (319)
                      ++....++..|+..+..+++.+|       +|..|++..|..+...+.++        +++++|.+.+
T Consensus        60 ~~~~~g~~~~A~~~~~~al~l~P-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~  120 (121)
T 1hxi_A           60 TQAENEKDGLAIIALNHARMLDP-------KDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQ  120 (121)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred             HHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence            45667889999999999999999       99999999999666666654        7788887654

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*

Probab=87.58  E-value=0.9  Score=46.63  Aligned_cols=80  Identities=9%  Similarity=-0.075  Sum_probs=62.5

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++..+.++..|+....++++.+|       ++..|++.+|..+..+++++        |++++|++.++...|..+-..+
T Consensus        52 ~l~~~g~~~eA~~~~~~Al~l~P-------~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~  124 (723)
T 4gyw_A           52 VLQQQGKLQEALMHYKEAIRISP-------TFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDS  124 (723)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred             HHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence            45666889999999999999998       99999999999888788776        8899999999988888776665


Q ss_pred             hHhHHHHHHHHHhccc
Q psy5048         279 RGHMITQGSLYFFLFY  294 (319)
Q Consensus       279 k~~~~kek~~y~~mF~  294 (319)
                      .... +-.+.|.+...
T Consensus       125 g~~~-eAi~~~~~Al~  139 (723)
T 4gyw_A          125 GNIP-EAIASYRTALK  139 (723)
T ss_dssp             TCHH-HHHHHHHHHHH
T ss_pred             CCHH-HHHHHHHHHHH
Confidence            4433 33344554444

>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A

Probab=87.21  E-value=0.18  Score=47.80  Aligned_cols=107  Identities=10%  Similarity=0.037  Sum_probs=67.1

Q ss_pred             hhhccCccccchhhhhhhhcCCcccccchHHHHHH--HHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHh
Q psy5048         145 FFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRAR--RDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCF  222 (319)
Q Consensus       145 ~~~~m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~--~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~  222 (319)
                      ....++++++...+......|+.++..+++..+..  ......     .|...   .....+-.++..+..+..|+..|.
T Consensus        12 ~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~~g~~~~A~~~~~   83 (537)
T 3fp2_A           12 QLKGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIEL-----DPNEP---VFYSNISACYISTGDLEKVIEFTT   83 (537)
T ss_dssp             HHTTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred             hhcCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh-----CCCCc---HHHHHHHHHHHHcCCHHHHHHHHH
Confidence            34567777777778888888888777776643221  111111     11111   222233345677799999999999


Q ss_pred             hhhccccccccCCCCChhHHHHHHHHHHhcCccc-------cccCCCChhh
Q psy5048         223 LLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL-------QYEFPPEQSQ  266 (319)
Q Consensus       223 ~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~-------a~~~dP~n~~  266 (319)
                      .+++.+|       +|+.+++++|..+..++.++       ++.++|....
T Consensus        84 ~al~~~p-------~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~  127 (537)
T 3fp2_A           84 KALEIKP-------DHSKALLRRASANESLGNFTDAMFDLSVLSLNGDFDG  127 (537)
T ss_dssp             HHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHC-------
T ss_pred             HHHhcCC-------chHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCCh
Confidence            9999999       99999999999777667765       5667777543

>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}

Probab=87.18  E-value=0.75  Score=34.17  Aligned_cols=52  Identities=10%  Similarity=-0.104  Sum_probs=42.7

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChh
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQS  265 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~  265 (319)
                      ++.....+..|+..+..++..+|       ++..+++..|..+...++++        +++++|.+.
T Consensus        28 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~   87 (115)
T 2kat_A           28 TYAEHEQFDAALPHLRAALDFDP-------TYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRG   87 (115)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHccCHHHHHHHHHHHHHHCC-------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccc
Confidence            45667889999999999999998       99999999999777677775        777777643

>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}

Probab=86.83  E-value=0.83  Score=36.91  Aligned_cols=56  Identities=11%  Similarity=-0.135  Sum_probs=43.1

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHH
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLG  272 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~  272 (319)
                      .....+..++..+..++..+|       +|..|++..|..+...++++        +++++| +..+...+.
T Consensus        17 ~~~g~~~~A~~~~~~al~~~P-------~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~   80 (176)
T 2r5s_A           17 LQQGEHAQALNVIQTLSDELQ-------SRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIA   80 (176)
T ss_dssp             HHTTCHHHHHHHHHTSCHHHH-------TSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHH
T ss_pred             HHcCCHHHHHHHHHHHHHHCC-------CcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHH
Confidence            445778888999999999888       99999999999776667765        777888 666554443

>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*

Probab=86.79  E-value=1.8  Score=35.35  Aligned_cols=82  Identities=6%  Similarity=-0.096  Sum_probs=58.8

Q ss_pred             HHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChh-----------
Q psy5048         205 SSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQS-----------  265 (319)
Q Consensus       205 ~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~-----------  265 (319)
                      -.++.....+..|+..+..++..+|       ++..+++.+|..+...++++        ++++.|.+.           
T Consensus        44 g~~~~~~g~~~~A~~~~~~al~~~~-------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~  116 (213)
T 1hh8_A           44 GCMYTILKNMTEAEKAFTRSINRDK-------HLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQF  116 (213)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCC
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHhCc-------cchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhcccc
Confidence            3455777899999999999999988       99999999999777777775        888888766           


Q ss_pred             -----hHHHHHHHHHHHHhHhHHHHHHHHHhccc
Q psy5048         266 -----QCLPLLGIRAQHQRGHMITQGSLYFFLFY  294 (319)
Q Consensus       266 -----~i~~el~~l~~~~k~~~~kek~~y~~mF~  294 (319)
                           .+...+..+-.+.... .+-...|.....
T Consensus       117 ~~~~~~~~~~l~~~~~~~g~~-~~A~~~~~~al~  149 (213)
T 1hh8_A          117 KLFACEVLYNIAFMYAKKEEW-KKAEEQLALATS  149 (213)
T ss_dssp             EEEHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHT
T ss_pred             CccchHHHHHHHHHHHHccCH-HHHHHHHHHHHH
Confidence                 6666666555444332 222334444443

>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A

Probab=86.73  E-value=1.6  Score=31.60  Aligned_cols=63  Identities=16%  Similarity=0.054  Sum_probs=47.0

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ  276 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~  276 (319)
                      ++.....+..++..+..++..+|       .+..+++..|..+...++++        +++++|++..+...|..+..
T Consensus        52 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~  122 (125)
T 1na0_A           52 AYYKQGDYDEAIEYYQKALELDP-------NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ  122 (125)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred             HHHHhCCHHHHHHHHHHHHHhCC-------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence            44556778888888888888777       88888888888666666664        77788888877777666543

>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}

Probab=86.43  E-value=1.5  Score=32.38  Aligned_cols=57  Identities=16%  Similarity=0.026  Sum_probs=45.7

Q ss_pred             hhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHh
Q psy5048         216 PSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQR  279 (319)
Q Consensus       216 ~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k  279 (319)
                      .++..+..++..+|       +|..++|..|..+...+++.        +++++|.+..+...|..+-....
T Consensus         3 ~a~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g   67 (115)
T 2kat_A            3 AITERLEAMLAQGT-------DNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQG   67 (115)
T ss_dssp             CHHHHHHHHHTTTC-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcC
Confidence            46777888888888       99999999999777777775        88999999888777766655443

>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1

Probab=86.32  E-value=0.43  Score=39.50  Aligned_cols=62  Identities=11%  Similarity=-0.117  Sum_probs=50.2

Q ss_pred             ccchhHhHHhhhhccc-cccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhH
Q psy5048         213 KKTPSIHNCFLLSTKS-MLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRG  280 (319)
Q Consensus       213 ~~~~a~~~c~~vl~~~-~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~  280 (319)
                      ....+|..+..+++.+ |.      +|..+||-.|..+..+.+|+        +++++|+|+.+....+.++++++.
T Consensus        50 ~~~~gI~lLe~ll~~~~p~------~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~~k  120 (152)
T 1pc2_A           50 DIRKGIVLLEELLPKGSKE------EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK  120 (152)
T ss_dssp             HHHHHHHHHHHHHHHSCHH------HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCcc------chHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence            3446788888888866 41      57999999999777788987        999999999999988888877643

>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}

Probab=85.80  E-value=0.77  Score=38.44  Aligned_cols=65  Identities=5%  Similarity=-0.079  Sum_probs=54.0

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCChhHHHH----------------HHHHHHhcCccc--------cccCCCCh
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTH----------------DYTRLALLLPFL--------QYEFPPEQ  264 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfR----------------rg~~~~~~~~~~--------a~~~dP~n  264 (319)
                      .....+..|+..+..++..+|       +|.-++|-                +|..+...++++        +++++|++
T Consensus        15 ~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~   87 (208)
T 3urz_A           15 IEAGQNGQAVSYFRQTIALNI-------DRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNN   87 (208)
T ss_dssp             HHTTCHHHHHHHHHHHHHHCH-------HHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred             HHCCCHHHHHHHHHHHHHhCC-------CChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence            455788999999999999999       99999999                999777777776        89999999


Q ss_pred             hhHHHHHHHHHHHHhH
Q psy5048         265 SQCLPLLGIRAQHQRG  280 (319)
Q Consensus       265 ~~i~~el~~l~~~~k~  280 (319)
                      .++...|..+-.....
T Consensus        88 ~~~~~~lg~~~~~~g~  103 (208)
T 3urz_A           88 VDCLEACAEMQVCRGQ  103 (208)
T ss_dssp             HHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            9888877776655443

>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}

Probab=85.67  E-value=1.5  Score=34.70  Aligned_cols=68  Identities=7%  Similarity=-0.097  Sum_probs=52.1

Q ss_pred             HHHHhcccchhHhHHhhhhcc------------------ccccccCCCCChhHHHHHHHHHHhcCccc--------cccC
Q psy5048         207 AYALLVKKTPSIHNCFLLSTK------------------SMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEF  260 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~------------------~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~  260 (319)
                      .+.....+..|+.....++..                  +|       .++.+++.+|..+..+++|.        |+++
T Consensus        20 ~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~   92 (162)
T 3rkv_A           20 ELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDR-------KNIPLYANMSQCYLNIGDLHEAEETSSEVLKR   92 (162)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHH-------THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHH-------HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc
Confidence            335567788888888888886                  56       88999999999777777875        8999


Q ss_pred             CCChhhHHHHHHHHHHHHhHh
Q psy5048         261 PPEQSQCLPLLGIRAQHQRGH  281 (319)
Q Consensus       261 dP~n~~i~~el~~l~~~~k~~  281 (319)
                      +|.+..+.-.+..+-.....+
T Consensus        93 ~p~~~~a~~~~g~~~~~~g~~  113 (162)
T 3rkv_A           93 EETNEKALFRRAKARIAAWKL  113 (162)
T ss_dssp             STTCHHHHHHHHHHHHHTTCH
T ss_pred             CCcchHHHHHHHHHHHHHhcH
Confidence            999987777666665554443

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=85.65  E-value=0.58  Score=47.32  Aligned_cols=78  Identities=10%  Similarity=-0.132  Sum_probs=57.7

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++..+.++..|+..+..+++.+|       +|..|+|.+|..+...++++        |++++|++.++...|..+-.+.
T Consensus       442 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~  514 (681)
T 2pzi_A          442 ALLDLGDVAKATRKLDDLAERVG-------WRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELA  514 (681)
T ss_dssp             HHHHHTCHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHH
T ss_pred             HHHhcCCHHHHHHHHHHHhccCc-------chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHc
Confidence            33455778888999999998888       89999999998666667765        7888888888888777776666


Q ss_pred             hHhHHHHHHHHHhcc
Q psy5048         279 RGHMITQGSLYFFLF  293 (319)
Q Consensus       279 k~~~~kek~~y~~mF  293 (319)
                      ..+.+  ...|....
T Consensus       515 g~~~~--~~~~~~al  527 (681)
T 2pzi_A          515 GNTDE--HKFYQTVW  527 (681)
T ss_dssp             TCCCT--TCHHHHHH
T ss_pred             CChHH--HHHHHHHH
Confidence            55544  44444443

>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}

Probab=85.39  E-value=1.5  Score=32.57  Aligned_cols=79  Identities=9%  Similarity=-0.133  Sum_probs=55.7

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCCh---hHHHHHHHHHHhcCccc--------cccCCCCh---hhHHHHHHHH
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTI---PAWTHDYTRLALLLPFL--------QYEFPPEQ---SQCLPLLGIR  274 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~Nv---KALfRrg~~~~~~~~~~--------a~~~dP~n---~~i~~el~~l  274 (319)
                      .....+..|+..+..++...|       ++.   .++|..|..+...+++.        +++.+|++   .++...+..+
T Consensus        13 ~~~~~~~~A~~~~~~~~~~~p-------~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~   85 (129)
T 2xev_A           13 LKNGKYDDASQLFLSFLELYP-------NGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLS   85 (129)
T ss_dssp             HHTTCHHHHHHHHHHHHHHCS-------SSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHH
T ss_pred             HHhCCHHHHHHHHHHHHHHCC-------CCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHH
Confidence            456788899999999999888       787   89999999777778876        78899998   5555555544


Q ss_pred             HHHHhHhHHHHHHHHHhcccC
Q psy5048         275 AQHQRGHMITQGSLYFFLFYN  295 (319)
Q Consensus       275 ~~~~k~~~~kek~~y~~mF~~  295 (319)
                      -.... ...+-...|..+...
T Consensus        86 ~~~~g-~~~~A~~~~~~~~~~  105 (129)
T 2xev_A           86 QYGEG-KNTEAQQTLQQVATQ  105 (129)
T ss_dssp             HHHTT-CHHHHHHHHHHHHHH
T ss_pred             HHHcC-CHHHHHHHHHHHHHH
Confidence            44332 233334455555543

>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}

Probab=85.33  E-value=1.3  Score=37.35  Aligned_cols=62  Identities=11%  Similarity=-0.018  Sum_probs=45.2

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhc-----------Cccc--------cccCCCChhhH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALL-----------LPFL--------QYEFPPEQSQC  267 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~-----------~~~~--------a~~~dP~n~~i  267 (319)
                      ++....++..|+..+..+++.+|       +|..+++.+|..+...           ++++        +++++|++..+
T Consensus        48 ~~~~~g~~~~A~~~~~~al~~~P-------~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~  120 (217)
T 2pl2_A           48 TQLKLGLVNPALENGKTLVARTP-------RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPL  120 (217)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred             HHHHcCCHHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHH
Confidence            44566778888888888888888       8888888888855555           5554        77788887766


Q ss_pred             HHHHHHHH
Q psy5048         268 LPLLGIRA  275 (319)
Q Consensus       268 ~~el~~l~  275 (319)
                      ...|..+-
T Consensus       121 ~~~lg~~~  128 (217)
T 2pl2_A          121 HLQRGLVY  128 (217)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            66555543

>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2

Probab=85.14  E-value=2.7  Score=36.97  Aligned_cols=66  Identities=9%  Similarity=-0.116  Sum_probs=54.1

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++....++..|+.....++..+|       +|..+++.+|..+..+++++        |++++|++..+...+..+-...
T Consensus        13 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~   85 (281)
T 2c2l_A           13 RLFVGRKYPEAAACYGRAITRNP-------LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEM   85 (281)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCS-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHT
T ss_pred             HHHHcCCHHHHHHHHHHHHHhCC-------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence            34566889999999999999998       99999999999777777775        8999999987777766655444


Q ss_pred             h
Q psy5048         279 R  279 (319)
Q Consensus       279 k  279 (319)
                      .
T Consensus        86 g   86 (281)
T 2c2l_A           86 E   86 (281)
T ss_dssp             T
T ss_pred             C
Confidence            3

>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1

Probab=84.84  E-value=0.98  Score=37.48  Aligned_cols=80  Identities=9%  Similarity=-0.146  Sum_probs=52.4

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++.....+..|+..+..++...|       ++..+++..|..+...++++        +++.+|.+..+...+..+-.+.
T Consensus       134 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~  206 (243)
T 2q7f_A          134 VLVKLEQPKLALPYLQRAVELNE-------NDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYK  206 (243)
T ss_dssp             HHHHTSCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred             HHHHhccHHHHHHHHHHHHHhCC-------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHc
Confidence            44566778888888888888777       78888888888665556664        6777888777766666655444


Q ss_pred             hHhHHHHHHHHHhccc
Q psy5048         279 RGHMITQGSLYFFLFY  294 (319)
Q Consensus       279 k~~~~kek~~y~~mF~  294 (319)
                      .... +-...|..+..
T Consensus       207 ~~~~-~A~~~~~~~~~  221 (243)
T 2q7f_A          207 ENRE-KALEMLDKAID  221 (243)
T ss_dssp             TCTT-HHHHHHHHHHH
T ss_pred             cCHH-HHHHHHHHHHc
Confidence            3322 22334444444

>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}

Probab=84.33  E-value=1.7  Score=37.72  Aligned_cols=62  Identities=10%  Similarity=-0.008  Sum_probs=51.7

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRA  275 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~  275 (319)
                      ++.....+..|+..+..++..+|       +|..+++..|..+..+++++        +++++|++..+...|..+-
T Consensus       245 ~~~~~g~~~~A~~~~~~a~~~~~-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~  314 (330)
T 3hym_B          245 VCRKLKKYAEALDYHRQALVLIP-------QNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCI  314 (330)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHST-------TCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHH
T ss_pred             HHHHhcCHHHHHHHHHHHHhhCc-------cchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHH
Confidence            44666888889999999999888       99999999999777677775        8999999988887777644

>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A

Probab=83.93  E-value=2.7  Score=32.37  Aligned_cols=80  Identities=6%  Similarity=-0.191  Sum_probs=59.7

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++.....+..|+..+..++..+|       .|..+++.+|..+...+++.        +++++|.+..+...+..+-...
T Consensus        22 ~~~~~~~~~~A~~~~~~al~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~   94 (166)
T 1a17_A           22 DYFKAKDYENAIKFYSQAIELNP-------SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMAL   94 (166)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred             HHHHccCHHHHHHHHHHHHHhCC-------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHh
Confidence            44566888999999999999888       99999999999777677775        8889999988877777665544


Q ss_pred             hHhHHHHHHHHHhccc
Q psy5048         279 RGHMITQGSLYFFLFY  294 (319)
Q Consensus       279 k~~~~kek~~y~~mF~  294 (319)
                      ... .+-...|.....
T Consensus        95 ~~~-~~A~~~~~~a~~  109 (166)
T 1a17_A           95 GKF-RAALRDYETVVK  109 (166)
T ss_dssp             TCH-HHHHHHHHHHHH
T ss_pred             ccH-HHHHHHHHHHHH
Confidence            332 333344554444

>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}

Probab=83.81  E-value=1.5  Score=37.54  Aligned_cols=73  Identities=4%  Similarity=-0.134  Sum_probs=51.9

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhc----------Cccc--------cccCCCChhhHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALL----------LPFL--------QYEFPPEQSQCL  268 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~----------~~~~--------a~~~dP~n~~i~  268 (319)
                      ++.....+..|+..+..++...|    .++.+..|+|+.|..+..+          +.++        +++.+|++..+.
T Consensus       157 ~~~~~g~~~~A~~~~~~~l~~~p----~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~  232 (261)
T 3qky_A          157 LYERRELYEAAAVTYEAVFDAYP----DTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLR  232 (261)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT----TSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHH
T ss_pred             HHHHccCHHHHHHHHHHHHHHCC----CCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHH
Confidence            45667899999999999999887    1112678999999955433          3332        888999997776


Q ss_pred             HHHHHHHHHHhHhHH
Q psy5048         269 PLLGIRAQHQRGHMI  283 (319)
Q Consensus       269 ~el~~l~~~~k~~~~  283 (319)
                      .-+..|....+...+
T Consensus       233 ~a~~~l~~~~~~~~~  247 (261)
T 3qky_A          233 TAEELYTRARQRLTE  247 (261)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            666666665554443

>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A

Probab=83.23  E-value=2.9  Score=39.24  Aligned_cols=68  Identities=7%  Similarity=-0.062  Sum_probs=55.7

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++.....+..|+..+..++..+|       +|+.+++.+|..+..++++.        +++++|.+..+...+..+-...
T Consensus        34 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~  106 (537)
T 3fp2_A           34 HFFTAKNFNEAIKYYQYAIELDP-------NEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANESL  106 (537)
T ss_dssp             HHHHTTCCC-CHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred             HHHHhccHHHHHHHHHHHHhhCC-------CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHc
Confidence            44667899999999999999999       99999999999777777775        8899999988887777776555


Q ss_pred             hHh
Q psy5048         279 RGH  281 (319)
Q Consensus       279 k~~  281 (319)
                      ...
T Consensus       107 g~~  109 (537)
T 3fp2_A          107 GNF  109 (537)
T ss_dssp             TCH
T ss_pred             CCH
Confidence            443

>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1

Probab=82.97  E-value=5.1  Score=28.99  Aligned_cols=67  Identities=7%  Similarity=-0.014  Sum_probs=53.4

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++.....+..|+.....++..+|       ++..+++.+|..+...++++        +++++|.+..+...+..+-.+.
T Consensus        21 ~~~~~~~~~~A~~~~~~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (131)
T 2vyi_A           21 EQMKVENFEAAVHFYGKAIELNP-------ANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSL   93 (131)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred             HHHHccCHHHHHHHHHHHHHcCC-------CCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHh
Confidence            34556788889999999999888       99999999999777677775        8889999988877777665554


Q ss_pred             hH
Q psy5048         279 RG  280 (319)
Q Consensus       279 k~  280 (319)
                      ..
T Consensus        94 ~~   95 (131)
T 2vyi_A           94 NK   95 (131)
T ss_dssp             TC
T ss_pred             CC
Confidence            43

>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}

Probab=82.64  E-value=2.9  Score=37.11  Aligned_cols=58  Identities=10%  Similarity=-0.078  Sum_probs=29.1

Q ss_pred             cccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048         212 VKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ  276 (319)
Q Consensus       212 ~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~  276 (319)
                      .++..|+.....+++.+|       +|..+++.+|..+..++.++        |++++|+|.++...|..+-.
T Consensus       180 ~~~~eA~~~~~~~l~~~p-------~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~  245 (291)
T 3mkr_A          180 EKLQDAYYIFQEMADKCS-------PTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQ  245 (291)
T ss_dssp             THHHHHHHHHHHHHHHSC-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCC-------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence            344455555555555555       55555555555444444443        55555555555444443333

>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}

Probab=82.15  E-value=3.3  Score=35.31  Aligned_cols=64  Identities=11%  Similarity=-0.175  Sum_probs=49.1

Q ss_pred             HHHhcccchhHhHHhhhhccccccccCCCCC---hhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048         208 YALLVKKTPSIHNCFLLSTKSMLTFARNQST---IPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ  276 (319)
Q Consensus       208 ~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~N---vKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~  276 (319)
                      +....++..|+..+..++...|       ++   ..|+|.+|..+...+++.        ++++.|++.....-+-.+..
T Consensus        25 ~~~~g~~~~A~~~~~~~l~~~p-------~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~   97 (261)
T 3qky_A           25 FYNQGKYDRAIEYFKAVFTYGR-------THEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAM   97 (261)
T ss_dssp             HHHTTCHHHHHHHHHHHGGGCS-------CSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHH
T ss_pred             HHHhCCHHHHHHHHHHHHHhCC-------CCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHH
Confidence            3556889999999999999888       77   999999999777778886        88888877655444444444


Q ss_pred             HH
Q psy5048         277 HQ  278 (319)
Q Consensus       277 ~~  278 (319)
                      ..
T Consensus        98 ~~   99 (261)
T 3qky_A           98 CY   99 (261)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*

Probab=81.65  E-value=3  Score=40.43  Aligned_cols=82  Identities=6%  Similarity=-0.252  Sum_probs=62.5

Q ss_pred             HHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048         206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH  277 (319)
Q Consensus       206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~  277 (319)
                      .++..+.++..|+..+..+++.+|       +|..+++..|..+...++++        +++++|++..+...|..+-..
T Consensus        65 ~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~  137 (568)
T 2vsy_A           65 RVRWTQQRHAEAAVLLQQASDAAP-------EHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRR  137 (568)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred             HHHHHCCCHHHHHHHHHHHHhcCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence            355677889999999999999998       99999999999777777775        889999999888888777766


Q ss_pred             Hh--HhHHHHHHHHHhccc
Q psy5048         278 QR--GHMITQGSLYFFLFY  294 (319)
Q Consensus       278 ~k--~~~~kek~~y~~mF~  294 (319)
                      ..  ...++-...|.....
T Consensus       138 ~~~~g~~~~A~~~~~~al~  156 (568)
T 2vsy_A          138 LCDWRALDVLSAQVRAAVA  156 (568)
T ss_dssp             TTCCTTHHHHHHHHHHHHH
T ss_pred             hhccccHHHHHHHHHHHHh
Confidence            51  223333444444444

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=81.60  E-value=2.1  Score=43.18  Aligned_cols=60  Identities=5%  Similarity=-0.241  Sum_probs=44.4

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIR  274 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l  274 (319)
                      ++..+.++.. +..+..+++.+|       +|..|+|.+|..+..+++++        |++++|++.++...+..+
T Consensus       510 ~~~~~g~~~~-~~~~~~al~~~P-------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~  577 (681)
T 2pzi_A          510 TAELAGNTDE-HKFYQTVWSTND-------GVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVT  577 (681)
T ss_dssp             HHHHHTCCCT-TCHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHH
T ss_pred             HHHHcCChHH-HHHHHHHHHhCC-------chHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHH
Confidence            3345566777 777777877777       88889998888777777775        888899887777655554

>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.36  E-value=2.5  Score=31.86  Aligned_cols=78  Identities=4%  Similarity=-0.274  Sum_probs=57.6

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCC---hhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQST---IPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH  277 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~N---vKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~  277 (319)
                      .....+..|+.....+++.+|       ++   ..+++.+|..+...++++        +++++|.+..+...+..+-..
T Consensus        39 ~~~~~~~~A~~~~~~a~~~~~-------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~  111 (148)
T 2dba_A           39 FKCGDYGGALAAYTQALGLDA-------TPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEK  111 (148)
T ss_dssp             HTTTCHHHHHHHHHHHHTSCC-------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred             HHhCCHHHHHHHHHHHHHHcc-------cchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHH
Confidence            456788889999999999888       77   999999999777777775        788999998888777776655


Q ss_pred             HhHhHHHHHHHHHhccc
Q psy5048         278 QRGHMITQGSLYFFLFY  294 (319)
Q Consensus       278 ~k~~~~kek~~y~~mF~  294 (319)
                      ..... +-...|.....
T Consensus       112 ~~~~~-~A~~~~~~al~  127 (148)
T 2dba_A          112 LGRLD-QAVLDLQRCVS  127 (148)
T ss_dssp             HTCHH-HHHHHHHHHHH
T ss_pred             cCCHH-HHHHHHHHHHH
Confidence            44432 33344444443

>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A

Probab=80.88  E-value=4.3  Score=34.02  Aligned_cols=60  Identities=5%  Similarity=-0.281  Sum_probs=44.5

Q ss_pred             HHHHHhcccchhHhHHhhhhccccccccCCCCChh---HHHHHHHHHHh------------------cCccc--------
Q psy5048         206 SAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIP---AWTHDYTRLAL------------------LLPFL--------  256 (319)
Q Consensus       206 ~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvK---ALfRrg~~~~~------------------~~~~~--------  256 (319)
                      .++.....+..|+.....+++..|       +|..   |+|++|..+..                  .++++        
T Consensus        49 ~~~~~~~~~~~A~~~~~~~l~~~P-------~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~  121 (225)
T 2yhc_A           49 YAYYKNADLPLAQAAIDRFIRLNP-------THPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSK  121 (225)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHCT-------TCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHH
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHCc-------CCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHH
Confidence            355777999999999999999998       8876   89999984432                  12222        


Q ss_pred             cccCCCChhhHHHHHH
Q psy5048         257 QYEFPPEQSQCLPLLG  272 (319)
Q Consensus       257 a~~~dP~n~~i~~el~  272 (319)
                      +++.+|++..+..-+.
T Consensus       122 ~l~~~P~~~~a~~a~~  137 (225)
T 2yhc_A          122 LVRGYPNSQYTTDATK  137 (225)
T ss_dssp             HHTTCTTCTTHHHHHH
T ss_pred             HHHHCcCChhHHHHHH
Confidence            8889999875554333

>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8

Probab=80.69  E-value=2  Score=35.59  Aligned_cols=55  Identities=13%  Similarity=0.033  Sum_probs=45.6

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCC-------Chh-----HHHHHHHHHHhcCccc--------cccC------
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQS-------TIP-----AWTHDYTRLALLLPFL--------QYEF------  260 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~-------NvK-----ALfRrg~~~~~~~~~~--------a~~~------  260 (319)
                      +...+.++..|+..+.++|+.+|       +       +..     +++.||..+..++.|+        |+++      
T Consensus        20 ~l~~~g~~eeAi~~Y~kAL~l~p-------~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e   92 (159)
T 2hr2_A           20 RQLVAGEYDEAAANCRRAMEISH-------TMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGE   92 (159)
T ss_dssp             HHHHHTCHHHHHHHHHHHHHHHT-------TSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHCCCHHHHHHHHHHHHhhCC-------CCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcccc
Confidence            44567899999999999999998       5       555     9999999888888886        8888      


Q ss_pred             -CCChhhHH
Q psy5048         261 -PPEQSQCL  268 (319)
Q Consensus       261 -dP~n~~i~  268 (319)
                       +|++..+.
T Consensus        93 ~~pd~~~A~  101 (159)
T 2hr2_A           93 LNQDEGKLW  101 (159)
T ss_dssp             TTSTHHHHH
T ss_pred             CCCchHHHH
Confidence             99987665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	319
d1q6ha_	210	d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase	4e-15
d1fd9a_	204	d.26.1.1 (A:) Macrophage infectivity potentiator p	8e-14
d1hxva_	85	d.26.1.1 (A:) Trigger factor PPIase domain {Mycopl	3e-11
d1kt1a2	111	d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Mo	4e-11
d1kt1a3	115	d.26.1.1 (A:139-253) FKBP51, N-terminal domains {M	1e-10
d1r9ha_	118	d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabd	1e-10
d2ppna1	107	d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12)	1e-10
d1u79a_	125	d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis tha	1e-10
d1yata_	113	d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeas	1e-09
d1q1ca1	120	d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Hu	2e-09
d1jvwa_	160	d.26.1.1 (A:) Macrophage infectivity potentiator p	7e-09
d1ix5a_	151	d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcu	2e-08
d1pbka_	116	d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId:	3e-08
d1q1ca2	117	d.26.1.1 (A:141-257) FKBP52, N-terminal domains {H	8e-07

>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]} Length = 210

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Peptidyl-prolyl cis-trans isomerase FkpA
species: Escherichia coli [TaxId: 562]

 Score = 70.7 bits (172), Expect = 4e-15
 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 68  VAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPG 126
                + R +P +F L    VI GW +GL  +  G K KL IPP LAYG  G   + P 
Sbjct: 141 EFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPGIPPN 197

>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]} Length = 204

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Legionella pneumophila [TaxId: 446]

 Score = 67.2 bits (163), Expect = 8e-14
 Identities = 18/53 (33%), Positives = 22/53 (41%)

Query: 75  RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
                  T  V QVI GW + L  M  G   ++ +P  LAYG R  G  I   
Sbjct: 137 EKTGKPATFQVSQVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGGPIGPN 189

>d1hxva_ d.26.1.1 (A:) Trigger factor PPIase domain {Mycoplasma genitalium [TaxId: 2097]} Length = 85

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Mycoplasma genitalium [TaxId: 2097]

 Score = 56.6 bits (136), Expect = 3e-11
 Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 70  MRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGN 122
                ++   T   G    IKG++ GL  M V +K+ L +     Y  +   +
Sbjct: 22  ASASAQNYELTI--GSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKELQS 72

>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 111

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

 Score = 57.1 bits (137), Expect = 4e-11
 Identities = 26/60 (43%), Positives = 32/60 (53%)

Query: 68  VAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
                HDR++PF F++G GQVIK WD G+  M  GE   L   P  AYG  G+   IP  
Sbjct: 39  KFDSSHDRNEPFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGATGSLPKIPSN 98

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 115

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

 Score = 55.8 bits (134), Expect = 1e-10
 Identities = 14/67 (20%), Positives = 22/67 (32%), Gaps = 2/67 (2%)

Query: 63  FKLTLVAMRIHDRDQPFTF-TLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAG 121
            +          RD  FT        +  G D+ L +M   E+  L + P   +G+ G  
Sbjct: 34  LEGRCGGRVFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILHLGPRYGFGEAGKP 93

Query: 122 NV-IPGG 127
              I   
Sbjct: 94  KFGIEPN 100

>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]} Length = 118

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKB-6, N-terminal domain
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 55.9 bits (134), Expect = 1e-10
 Identities = 27/60 (45%), Positives = 31/60 (51%)

Query: 68  VAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
                 DR   F+F LG G VIKGWD G+  M  GE  + TI     YGD G+   IPGG
Sbjct: 45  KFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGG 104

>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FK-506 binding protein (FKBP12), an immunophilin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 1e-10
 Identities = 26/60 (43%), Positives = 37/60 (61%)

Query: 68  VAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
                 DR++PF F LG  +VI+GW++G+ +M VG++ KLTI P  AYG  G   +IP  
Sbjct: 35  KFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPH 94

>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 125

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP13
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 56.0 bits (134), Expect = 1e-10
 Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 11/84 (13%)

Query: 55  CVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQ------GLTEMCVGEKRKLT 108
             + +    +   V    ++R +P TF +GVG+VIKGWDQ      G+  M  G KR L 
Sbjct: 29  IKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTLR 88

Query: 109 IPPALAYGDRGAGN-----VIPGG 127
           IPP LAYGDRGAG      +IP  
Sbjct: 89  IPPELAYGDRGAGCKGGSCLIPPA 112

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 113

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.8 bits (126), Expect = 1e-09
 Identities = 30/60 (50%), Positives = 36/60 (60%)

Query: 68  VAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
                 DR  PF   +GVGQVIKGWD G+ ++ VGEK +LTIP   AYG RG   +IP  
Sbjct: 41  KFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPGLIPPN 100

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 2e-09
 Identities = 24/60 (40%), Positives = 29/60 (48%)

Query: 68  VAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
                 DR   F+F LG G+VIK WD  +  M VGE   +T  P  AYG  G+   IP  
Sbjct: 46  KFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPN 105

>d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Trypanosoma cruzi [TaxId: 5693]} Length = 160

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 51.7 bits (123), Expect = 7e-09
 Identities = 20/51 (39%), Positives = 27/51 (52%)

Query: 77  QPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG 127
           +    T    +VIKGW + L  M  G++ +L IP  LAYG  G G +IP  
Sbjct: 76  RGKPTTFRPNEVIKGWTEALQLMREGDRWRLFIPYDLAYGVTGGGGMIPPY 126

>d1ix5a_ d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]} Length = 151

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Archaeal FKBP
species: Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]

 Score = 50.6 bits (120), Expect = 2e-08
 Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 57  SSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYG 116
           +S +   K   +        +P  F +G GQ+I+G+++ + +M VG+++ + IP   AYG
Sbjct: 24  TSIEEVAKEAGI-YAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAYG 82

Query: 117 DRGAGNV 123
           +R    +
Sbjct: 83  NRNEMLI 89

>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]} Length = 116

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP25
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (116), Expect = 3e-08
 Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 73  HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG-AGNVIPGG 127
               +P +F +GVG+VI+GWD+ L  M  GEK +L I P  AYG +G     IP  
Sbjct: 48  KKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPN 103

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 8e-07
 Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 1/59 (1%)

Query: 70  MRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGA-GNVIPGG 127
           +      +          +  G ++ +  M  GE   + + P+ A+G  G     IP  
Sbjct: 42  LFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPN 100

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	319
d2ppna1	107	FK-506 binding protein (FKBP12), an immunophilin {	99.92
d1q1ca1	120	FKBP52, N-terminal domains {Human (Homo sapiens) [	99.92
d1r9ha_	118	FKB-6, N-terminal domain {Caenorhabditis elegans [	99.91
d1kt1a2	111	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	99.91
d1yata_	113	Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyc	99.9
d1fd9a_	204	Macrophage infectivity potentiator protein (MIP) {	99.9
d1pbka_	116	FKBP25 {Human (Homo sapiens) [TaxId: 9606]}	99.89
d1q6ha_	210	Peptidyl-prolyl cis-trans isomerase FkpA {Escheric	99.89
d1jvwa_	160	Macrophage infectivity potentiator protein (MIP) {	99.87
d1u79a_	125	FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId:	99.86
d1kt1a3	115	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	99.83
d1q1ca2	117	FKBP52, N-terminal domains {Human (Homo sapiens) [	99.78
d1kt1a1	168	FKBP51, C-terminal domain {Monkey (Saimiri bolivie	99.65
d1p5qa1	170	FKBP52 (FKBP4), C-terminal domain {Human (Homo sap	99.64
d1ix5a_	151	Archaeal FKBP {Archaeon Methanococcus thermolithot	99.53
d1hxva_	85	Trigger factor PPIase domain {Mycoplasma genitaliu	99.47
d2fbna1	153	Putative 70 kda peptidylprolyl isomerase PFL2275c	99.41
d1ihga1	169	Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}	99.04
d1l1pa_	106	Trigger factor PPIase domain {Escherichia coli [Ta	98.93
d1t11a3	113	Trigger factor PPIase domain {Vibrio cholerae [Tax	98.87
d1elwa_	117	Hop {Human (Homo sapiens) [TaxId: 9606]}	98.39
d1a17a_	159	Protein phosphatase 5 {Human (Homo sapiens) [TaxId	98.28
d2c2la1	201	STIP1 homology and U box-containing protein 1, STU	97.87
d1elra_	128	Hop {Human (Homo sapiens) [TaxId: 9606]}	96.92
d1jvwa_	160	Macrophage infectivity potentiator protein (MIP) {	96.16
d1nzna_	122	Mitochondria fission protein Fis1 {Human (Homo sap	95.85
d1q1ca2	117	FKBP52, N-terminal domains {Human (Homo sapiens) [	95.8
d1hxia_	112	Peroxin pex5 (peroxisomal targeting signal 1 (PTS1	95.79
d2c2la1	201	STIP1 homology and U box-containing protein 1, STU	95.55
d1zu2a1	145	Mitochondrial import receptor subunit tom20-3 {Tha	95.31
d1xnfa_	259	Lipoprotein NlpI {Escherichia coli [TaxId: 562]}	94.61
d2hr2a1	156	Hypothetical protein CT2138 {Chlorobium tepidum [T	94.01
d1w3ba_	388	O-GlcNAc transferase p110 subunit, OGT {Human (Hom	93.68
d1a17a_	159	Protein phosphatase 5 {Human (Homo sapiens) [TaxId	93.56
d1elwa_	117	Hop {Human (Homo sapiens) [TaxId: 9606]}	93.19
d1xnfa_	259	Lipoprotein NlpI {Escherichia coli [TaxId: 562]}	92.73
d1hh8a_	192	Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H	92.16
d1w3ba_	388	O-GlcNAc transferase p110 subunit, OGT {Human (Hom	91.64
d1tjca_	95	Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human	91.59
d1elra_	128	Hop {Human (Homo sapiens) [TaxId: 9606]}	90.93
d2h6fa1	315	Protein farnesyltransferase alpha-subunit {Human (	90.83
d2h6fa1	315	Protein farnesyltransferase alpha-subunit {Human (	90.59
d1kt1a2	111	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	90.0
d1zu2a1	145	Mitochondrial import receptor subunit tom20-3 {Tha	89.64
d1fcha_	323	Peroxin pex5 (peroxisomal targeting signal 1 (PTS1	89.6
d2ppna1	107	FK-506 binding protein (FKBP12), an immunophilin {	86.58
d1q1ca1	120	FKBP52, N-terminal domains {Human (Homo sapiens) [	85.7
d1fcha_	323	Peroxin pex5 (peroxisomal targeting signal 1 (PTS1	85.34
d1kt1a3	115	FKBP51, N-terminal domains {Monkey (Saimiri bolivi	85.0
d1yata_	113	Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyc	84.45
d2pqrb1	124	Mitochondria fission protein Fis1 {Baker's yeast (	81.66
d1hh8a_	192	Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H	81.58

>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FK-506 binding protein (FKBP12), an immunophilin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.9e-25  Score=174.80  Aligned_cols=105  Identities=30%  Similarity=0.506  Sum_probs=99.0

Q ss_pred             eEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCC
Q psy5048          35 LSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPAL  113 (319)
Q Consensus        35 v~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~  113 (319)
                      +.+.++++|+|. .|..++.|++| |++++.||++|+++++.+.|+.|.+|.+++++||+++|.+|++||+++|+|||++
T Consensus         2 v~~~~l~~G~G~~~p~~gd~V~v~-y~g~l~dG~~~d~s~~~~~p~~~~~g~~~~i~G~~~~l~~M~~Ge~~~~~ip~~l   80 (107)
T d2ppna1           2 VQVETISPGDGRTFPKRGQTCVVH-YTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY   80 (107)
T ss_dssp             EEEEEEECCCSSCCCCTTCEEEEE-EEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred             cEEEEEECcCCccCCCCCCEEEEE-EEEEecCCeEEEeeeccceeeeEeeCcchhheeehhhhcCccCCCEEEEEECHHH
Confidence            567889999997 48889999996 9999999999999998889999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048         114 AYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       114 ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      |||..+.++.||||++|+|+|+|++|+
T Consensus        81 aYG~~g~~~~IPp~s~lif~ieL~~vk  107 (107)
T d2ppna1          81 AYGATGHPGIIPPHATLVFDVELLKLE  107 (107)
T ss_dssp             TTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred             hCCCCCCCCCCCcCCeEEEEEEEEEEC
Confidence            999999888899999999999999985

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-24  Score=175.53  Aligned_cols=108  Identities=28%  Similarity=0.409  Sum_probs=101.4

Q ss_pred             cceEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCC
Q psy5048          33 YSLSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPP  111 (319)
Q Consensus        33 ~lv~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p  111 (319)
                      ..|.+.++++|.|. .|..++.|.+| |++++.||++|++|++.++|++|.+|.+.+++||+++|.+|++||+++|.|||
T Consensus        11 ~gv~~~i~~~G~G~~~P~~gd~V~v~-y~~~l~dG~~fdss~~~~~p~~f~~g~~~~i~G~~~~l~~M~~Ge~~~~~ip~   89 (120)
T d1q1ca1          11 EGVLKVIKREGTGTEMPMIGDRVFVH-YTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKP   89 (120)
T ss_dssp             SSEEEEEEECCSSSCCCCTTCEEEEE-EEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEECG
T ss_pred             CCEEEEEEEcccCCcCCCCCCEEEEE-EEEEEcCCCEEEeccccccceeeecCCCceeeeeeeeeccccCCcEEEEEECH
Confidence            45778889999995 68899999996 99999999999999998899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCeEEEEEEEeeeee
Q psy5048         112 ALAYGDRGAGNVIPGGLSAVRQSEHSELEI  141 (319)
Q Consensus       112 ~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~  141 (319)
                      ++|||..+.++.||||++|+|+|||++|+.
T Consensus        90 ~laYG~~g~~~~IPp~s~LifeIeLl~v~~  119 (120)
T d1q1ca1          90 EYAYGSAGSPPKIPPNATLVFEVELFEFKG  119 (120)
T ss_dssp             GGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred             HHhCCCcCCCCCCCcCCcEEEEEEEEEEeC
Confidence            999999998888999999999999999974

>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKB-6, N-terminal domain
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.91  E-value=7.8e-25  Score=176.06  Aligned_cols=107  Identities=31%  Similarity=0.520  Sum_probs=100.9

Q ss_pred             cceEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCC
Q psy5048          33 YSLSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPP  111 (319)
Q Consensus        33 ~lv~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p  111 (319)
                      ..|.+.++++|+|. .|..++.|++| |++++.||++|++|+..+.|++|.+|.+.+|+||+++|.+|++||+++|+|||
T Consensus        10 ~Gl~~~il~~G~G~~~p~~gd~V~v~-y~~~l~dG~v~dss~~~~~p~~f~~g~~~vi~G~~~~l~~M~~Ge~~~~~ipp   88 (118)
T d1r9ha_          10 GGVLKLIKKEGQGVVKPTTGTTVKVH-YVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRS   88 (118)
T ss_dssp             SSEEEEEEECCBSSCCCCTTCEEEEE-EEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEECG
T ss_pred             CCEEEEEEECcCCCCCCCCCCEEEEE-EEEEEcCCCEEEEccccceeeeeeccCcceeeeeeeeeeeecCCceEEEEECH
Confidence            36778889999996 68999999996 99999999999999998899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048         112 ALAYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       112 ~~ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      ++|||..+.++.|||+++|+|+|||++|.
T Consensus        89 ~laYG~~g~~~~IPp~s~l~f~IeLl~f~  117 (118)
T d1r9ha_          89 DYGYGDAGSPPKIPGGATLIFEVELFEWS  117 (118)
T ss_dssp             GGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred             HHhCCcCCCCCccCcCCcEEEEEEEEEEe
Confidence            99999999888899999999999999985

>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=99.91  E-value=4.3e-25  Score=175.72  Aligned_cols=107  Identities=29%  Similarity=0.477  Sum_probs=80.8

Q ss_pred             cceEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCC
Q psy5048          33 YSLSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPP  111 (319)
Q Consensus        33 ~lv~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p  111 (319)
                      ..+.+.++++|.|. .|..++.|+++ |++++.||++||+|++.+.|++|.+|.+.+|+||+++|.+|++||+++|+|||
T Consensus         4 ~Gi~~~i~~~G~g~~~P~~gd~V~v~-y~~~l~dG~~~dss~~~~~p~~f~lg~~~~i~G~~~~l~~M~~Ge~~~~~ip~   82 (111)
T d1kt1a2           4 RGVLKIVKRVGHGEETPMIGDRVYVH-YNGKLANGKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKP   82 (111)
T ss_dssp             CSCEEEC----CCSCCCCTTCEEEEE-CCCCSCC------------CEEEETTSSSSCHHHHHSTTTCCTTCCEEEEC--
T ss_pred             CCeEEEEEEcccCCcCCCCCCEEEEE-EEEEECCCCEEEEEEecceeeeeecCCCcEEeeeeeeehhccCCcEEEEEECH
Confidence            34667789999986 68999999986 99999999999999998899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048         112 ALAYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       112 ~~ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      ++|||..|..+.||||++|+|+|||++|+
T Consensus        83 ~layG~~g~~~~IPp~s~lif~ieLl~ik  111 (111)
T d1kt1a2          83 EYAYGATGSLPKIPSNATLFFEVELLDFK  111 (111)
T ss_dssp             --CCCTTTCTTTSCTTCCCEEEEEEEEEE
T ss_pred             HHhCCCCCCCCcCCcCCeEEEEEEEEEEC
Confidence            99999999888899999999999999985

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=8.6e-24  Score=168.54  Aligned_cols=107  Identities=32%  Similarity=0.493  Sum_probs=100.0

Q ss_pred             cceEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCC
Q psy5048          33 YSLSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPP  111 (319)
Q Consensus        33 ~lv~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p  111 (319)
                      ..+.+.+++.|+|. .|..++.|++| |++++.||++|++++....|+.|.+|.+.+++||++||.+|++||+++|.|||
T Consensus         6 ~gl~~~~l~~G~G~~~P~~gd~V~v~-y~~~~~dG~~~ds~~~~~~~~~~~~~~~~~i~G~~~~l~~M~~G~~~~~~iP~   84 (113)
T d1yata_           6 GNVKIDRISPGDGATFPKTGDLVTIH-YTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIPG   84 (113)
T ss_dssp             GGCEEEEEECCCSSCCCCTTCEEEEE-EEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEECG
T ss_pred             CCcEEEEEECccCCcCCCCCCEEEEE-EEEEEecCcEEeccccCCceEeeeeccCceeeehhhhcccccCCCEEEEEech
Confidence            45678889999997 48889999996 99999999999999988899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048         112 ALAYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       112 ~~ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      ++|||..|.++.|||+++|+|+|||++|.
T Consensus        85 ~laYG~~g~~~~IP~~s~Lif~ieLl~I~  113 (113)
T d1yata_          85 PYAYGPRGFPGLIPPNSTLVFDVELLKVN  113 (113)
T ss_dssp             GGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred             HHeecCcCCCCccCcCCeEEEEEEEEEeC
Confidence            99999999988899999999999999873

>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Legionella pneumophila [TaxId: 446]

Probab=99.90  E-value=9.3e-24  Score=185.16  Aligned_cols=110  Identities=23%  Similarity=0.345  Sum_probs=102.1

Q ss_pred             eecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEE
Q psy5048          29 SLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLT  108 (319)
Q Consensus        29 ~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~  108 (319)
                      ......+.+.++++|.|..|..++.|.|| |++++.||++|++++.++.|++|.+  +.+|+||++||.+|++|++++|+
T Consensus        94 ~~~~sGl~y~v~~~G~G~~p~~~d~v~v~-y~g~l~dg~~f~~s~~~~~p~~~~~--~~~i~G~~e~l~~m~~G~~~~~~  170 (204)
T d1fd9a_          94 VVLPSGLQYKVINSGNGVKPGKSDTVTVE-YTGRLIDGTVFDSTEKTGKPATFQV--SQVIPGWTEALQLMPAGSTWEIY  170 (204)
T ss_dssp             EECTTSCEEEEEECCCSCCCCTTCEEEEE-EEEEETTSCEEEEHHHHCSCEEEEG--GGSCHHHHHHHTTCCTTCEEEEE
T ss_pred             EEecCccEEEEeecCCCcccCCCCEEEEE-EEEEECCCCEecccccCCCCceecC--CccchhHHHHhcCCCCCCEEEEE
Confidence            44556777888999999999999999997 9999999999999998889999987  57999999999999999999999


Q ss_pred             eCCCCCCCCCCCCCCCCCCCeEEEEEEEeeeee
Q psy5048         109 IPPALAYGDRGAGNVIPGGLSAVRQSEHSELEI  141 (319)
Q Consensus       109 i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~  141 (319)
                      |||++|||..|.++.||||++|+|+|||++|++
T Consensus       171 iP~~laYG~~g~~~~Ipp~s~l~feveL~~i~k  203 (204)
T d1fd9a_         171 VPSGLAYGPRSVGGPIGPNETLIFKIHLISVKK  203 (204)
T ss_dssp             ECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEEC
T ss_pred             EChHHCcCCCCCCCCcCcCCcEEEEEEEEEEEc
Confidence            999999999999888999999999999999985

>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP25
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.8e-23  Score=167.36  Aligned_cols=105  Identities=27%  Similarity=0.467  Sum_probs=95.0

Q ss_pred             eEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeecc-------CCCCeEEeeCCCcccccHhHhhhccccCcEEE
Q psy5048          35 LSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHD-------RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRK  106 (319)
Q Consensus        35 v~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~-------~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~  106 (319)
                      +...|+++|.|. .|..++.|++| |++++.||++||+|+.       .++|+.|.+|.+.+|+||+++|.+|++||+++
T Consensus         3 ~~k~vl~~G~G~~~P~~gd~V~v~-y~~~l~dG~~fdss~~~~~~~~~~~~p~~f~lg~~~~i~Gl~~~v~~M~~Ge~~~   81 (116)
T d1pbka_           3 YTKSVLKKGDKTNFPKKGDVVHCW-YTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKAR   81 (116)
T ss_dssp             EEEEEEECCCSSCCCCTTCEEEEE-EEEECTTSCEEEECCCSSCCTTTSSCCEEEETTTTSSCHHHHHHHTTCCTTCEEE
T ss_pred             ceEEEEecCCCCCCCCCCCEEEEE-EEEEECCCCEeecccccccccccCCCceeeeecccccccchheechhhcCCcEEE
Confidence            345678899995 69999999997 9999999999999865       34699999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCCCC-CCCCCCCeEEEEEEEeeee
Q psy5048         107 LTIPPALAYGDRGAG-NVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       107 v~i~p~~ayG~~g~~-~~Ip~~~~l~feVeL~~v~  140 (319)
                      |+|||++|||..+.+ ..|||+++|+|+|+|++|+
T Consensus        82 ~~ip~~~ayG~~g~~~~~Ipp~s~L~feieLl~ve  116 (116)
T d1pbka_          82 LEIEPEWAYGKKGQPDAKIPPNAKLTFEVELVDID  116 (116)
T ss_dssp             EEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEC
T ss_pred             EEECHHHhCCccCCCCCCcCcCCeEEEEEEEEEEC
Confidence            999999999999975 4599999999999999985

>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Peptidyl-prolyl cis-trans isomerase FkpA
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=2.6e-23  Score=183.06  Aligned_cols=108  Identities=30%  Similarity=0.428  Sum_probs=101.1

Q ss_pred             eecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEE
Q psy5048          29 SLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLT  108 (319)
Q Consensus        29 ~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~  108 (319)
                      .-.+..+.+.++++|.|..|..++.|+|| |++++.||++|++|+.++.|+.|.+  +++|+||+++|.+|++|++++|+
T Consensus       103 ~~~~sGl~y~v~~~G~G~~p~~gd~v~v~-y~g~l~dG~~fd~s~~~~~p~~~~~--~~vi~g~~e~l~~m~~G~k~~~~  179 (210)
T d1q6ha_         103 KTSSTGLVYQVVEAGKGEAPKDSDTVVVN-YKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPGWTEGLKNIKKGGKIKLV  179 (210)
T ss_dssp             EECTTSCEEEEEECCSSCCCCTTCEEEEE-EEEEETTSCEEEEGGGGTSCEEEEG--GGSCHHHHHHGGGSCTTCEEEEE
T ss_pred             EEccCceEEEEeeCCCCCCCCCCceEEEE-EEEEEcCCCEEeecccCCCcceecc--CccchhHHHHHhhccCCCEEEEE
Confidence            45567788899999999999999999997 9999999999999999999999999  47999999999999999999999


Q ss_pred             eCCCCCCCCCCCCCCCCCCCeEEEEEEEeeee
Q psy5048         109 IPPALAYGDRGAGNVIPGGLSAVRQSEHSELE  140 (319)
Q Consensus       109 i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~  140 (319)
                      |||++|||..|.++ ||||++|+|+|||++|+
T Consensus       180 iP~~laYG~~g~~~-Ippns~Lvfevel~~ik  210 (210)
T d1q6ha_         180 IPPELAYGKAGVPG-IPPNSTLVFDVELLDVK  210 (210)
T ss_dssp             ECGGGTTTTTCBTT-BCTTCCEEEEEEEEEEC
T ss_pred             ECHHHCcCCCCCCC-CCcCCcEEEEEEEEEEC
Confidence            99999999999875 99999999999999985

>d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.87  E-value=1.9e-22  Score=170.25  Aligned_cols=112  Identities=27%  Similarity=0.351  Sum_probs=100.0

Q ss_pred             eecccceEEEEeecCcCC-CCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEE
Q psy5048          29 SLSPYSLSLILPRRAENL-KPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKL  107 (319)
Q Consensus        29 ~~d~~lv~~~i~~~G~G~-~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v  107 (319)
                      ...+..|.+.+++.|.|. .|..++.|+|| |.+++.||++|++++..+.|+.  +|.+.+|+||+++|.+|++||+++|
T Consensus        30 ~~~~sGl~y~il~~G~G~~~P~~gd~V~v~-Y~g~l~dG~~fds~~~~~~p~~--~~~~~~i~G~~e~l~~M~~Ge~~~v  106 (160)
T d1jvwa_          30 VKLPSGLVFQRIARGSGKRAPAIDDKCEVH-YTGRLRDGTVFDSSRERGKPTT--FRPNEVIKGWTEALQLMREGDRWRL  106 (160)
T ss_dssp             EECTTSCEEEEEECCCCSBCCCTTCCEEEE-EEEECTTSCEEEEHHHHTSCEE--ECGGGSCHHHHHHHTTCCTTCEEEE
T ss_pred             EECCCCCEEEEEECcccccCCCCCcceEEE-EEEEEccCCeeeeeccccCccc--cCccccchhHHHHhcCccccceeEE
Confidence            445667888999999996 68889999996 9999999999999988776755  5668999999999999999999999


Q ss_pred             EeCCCCCCCCCCCCCCCCCCCeEEEEEEEeeeeecc
Q psy5048         108 TIPPALAYGDRGAGNVIPGGLSAVRQSEHSELEIST  143 (319)
Q Consensus       108 ~i~p~~ayG~~g~~~~Ip~~~~l~feVeL~~v~~~~  143 (319)
                      +|||++|||..|..+.||||++|+|+|+|++|++.+
T Consensus       107 ~iPp~laYG~~g~~~~IPp~s~LifeIeLl~i~~~~  142 (160)
T d1jvwa_         107 FIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKDGG  142 (160)
T ss_dssp             EECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGGGC
T ss_pred             EeCHHHCcCCCCCCCCcCcCCcEEEEEEEEEEecCC
Confidence            999999999999888899999999999999998543

>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP13
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.86  E-value=2.8e-22  Score=162.31  Aligned_cols=110  Identities=36%  Similarity=0.514  Sum_probs=99.7

Q ss_pred             eecccceEEEEeecCcCCCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhc------cccC
Q psy5048          29 SLSPYSLSLILPRRAENLKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTE------MCVG  102 (319)
Q Consensus        29 ~~d~~lv~~~i~~~G~G~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~------Mk~G  102 (319)
                      ...+..|.+.++++|+|..|..++.|.+| |++++.||++||+|+..+.|+.|.+|.+.+++||+++|.+      |++|
T Consensus         4 ~~~psGl~y~~~~~G~G~~p~~gd~V~v~-y~g~l~~G~~fdss~~~~~p~~~~~g~~~~i~g~~~~i~g~~~l~~M~~G   82 (125)
T d1u79a_           4 SVSPSGLAFCDKVVGYGPEAVKGQLIKAH-YVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTG   82 (125)
T ss_dssp             EECTTSCEEEEEECCSSCBCCTTCEEEEE-EEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBTT
T ss_pred             EECCCCCEEEEEEeccCCCCCCCCEEEEE-EEeeecCCcEEecccccCcceeEecCccccccchhhhccchhhcccccCC
Confidence            34566788889999999999999999996 9999999999999998889999999999999999998855      9999


Q ss_pred             cEEEEEeCCCCCCCCCCC-----CCCCCCCCeEEEEEEEeee
Q psy5048         103 EKRKLTIPPALAYGDRGA-----GNVIPGGLSAVRQSEHSEL  139 (319)
Q Consensus       103 E~~~v~i~p~~ayG~~g~-----~~~Ip~~~~l~feVeL~~v  139 (319)
                      ++++|+|||++|||..|.     .+.||||++|+|+|||+.+
T Consensus        83 ~k~~v~iP~~laYG~~G~~~~~~~~~IPp~s~LifeieLl~~  124 (125)
T d1u79a_          83 GKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK  124 (125)
T ss_dssp             CEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred             CEEEEEECHHHCCCCCCcCCcCCCCcCCcCCeEEEEEEEEEe
Confidence            999999999999999874     3359999999999999986

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=99.83  E-value=1.6e-20  Score=149.56  Aligned_cols=101  Identities=19%  Similarity=0.236  Sum_probs=89.0

Q ss_pred             ceEEEEeecCcC-CCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCC---CcccccHhHhhhccccCcEEEEEe
Q psy5048          34 SLSLILPRRAEN-LKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGV---GQVIKGWDQGLTEMCVGEKRKLTI  109 (319)
Q Consensus        34 lv~~~i~~~G~G-~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~---~~~i~Gle~al~~Mk~GE~~~v~i  109 (319)
                      .+.+.++++|+| ..|..++.|++| |++++ +|++|+++     ++.|.++.   +.+|+||+++|.+|++||+++|+|
T Consensus         9 gi~k~il~~G~G~~~p~~gd~V~v~-y~g~~-~g~~~~~~-----~~~~~~~~~~~~~vi~G~~~~l~~M~~Ge~~~v~i   81 (115)
T d1kt1a3           9 GIIRRTKRRGEGYSNPNEGARVQIH-LEGRC-GGRVFDCR-----DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILHL   81 (115)
T ss_dssp             SEEEEEEECCCCSSCCCTTCEEEEE-EEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEE
T ss_pred             CEEEEEEEeecCCCCCCCCCEEEEE-EEEEe-CCcccccc-----ccCceeeeccccccCchhHhhhccchhhceeEEEe
Confidence            466788999999 589999999996 99996 88888875     46677764   368999999999999999999999


Q ss_pred             CCCCCCCCCCCCCC-CCCCCeEEEEEEEeeeee
Q psy5048         110 PPALAYGDRGAGNV-IPGGLSAVRQSEHSELEI  141 (319)
Q Consensus       110 ~p~~ayG~~g~~~~-Ip~~~~l~feVeL~~v~~  141 (319)
                      ||++|||..+.++. ||||++|+|+|+|++|++
T Consensus        82 p~~~ayG~~g~~~~~Ipp~a~l~f~ieLl~~~k  114 (115)
T d1kt1a3          82 GPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEK  114 (115)
T ss_dssp             CGGGSSCTTCBTTTTBCTTCCEEEEEEEEEEEC
T ss_pred             CHHHCcCCCCCCCCCcCcCCeEEEEEEEEEEEe
Confidence            99999999998764 999999999999999985

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=4.3e-19  Score=141.57  Aligned_cols=103  Identities=19%  Similarity=0.282  Sum_probs=86.9

Q ss_pred             ceEEEEeecCcC-CCCCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCC---CcccccHhHhhhccccCcEEEEEe
Q psy5048          34 SLSLILPRRAEN-LKPYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGV---GQVIKGWDQGLTEMCVGEKRKLTI  109 (319)
Q Consensus        34 lv~~~i~~~G~G-~~p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~---~~~i~Gle~al~~Mk~GE~~~v~i  109 (319)
                      .|.++++++|.| ..|..++.|+++ |++++.||+ |+++     +..|..+.   ..+++||+++|.+|++||+++|+|
T Consensus         9 gi~~~il~~G~G~~~p~~gd~V~v~-y~g~~~~~~-~~~~-----~~~~~~~~~~~~~~i~Gl~~~l~~M~~Ge~~~i~i   81 (117)
T d1q1ca2           9 GIIRRIQTRGEGYAKPNEGAIVEVA-LEGYYKDKL-FDQR-----ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYL   81 (117)
T ss_dssp             SEEEEEEECCSCSCCCCTTCEEEEE-EEEEETTEE-EEEE-----EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEE
T ss_pred             CEEEEEEeeecCCCCCCCCCEEEEE-EEEEeCCCc-Eeec-----cccceeeecceeeeCcHHHHhhhcchhhCeEEEEE
Confidence            466788999999 478999999996 999996664 5554     34555553   368999999999999999999999


Q ss_pred             CCCCCCCCCCCCC-CCCCCCeEEEEEEEeeeeecc
Q psy5048         110 PPALAYGDRGAGN-VIPGGLSAVRQSEHSELEIST  143 (319)
Q Consensus       110 ~p~~ayG~~g~~~-~Ip~~~~l~feVeL~~v~~~~  143 (319)
                      ||++|||..|.++ .|||+++|+|+|+|++|++.+
T Consensus        82 p~~~ayG~~g~~~~~Ipp~s~l~f~veL~~~~~~k  116 (117)
T d1q1ca2          82 KPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAK  116 (117)
T ss_dssp             CGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEECCC
T ss_pred             CHHHhCcccCCCCCccCcCCeEEEEEEEEEEEeCC
Confidence            9999999999765 599999999999999999654

>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: FKBP51, C-terminal domain
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=99.65  E-value=1e-16  Score=134.37  Aligned_cols=147  Identities=10%  Similarity=0.012  Sum_probs=116.3

Q ss_pred             hhhccCccccchhhhhhhhcCCcccccchHHHHHHHH--hhhhhcccCCc-------chhHHHHHHHhhHHHHHHhcccc
Q psy5048         145 FFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRD--RGKRRIQSFKP-------HRAESEKLYAHCSSAYALLVKKT  215 (319)
Q Consensus       145 ~~~~m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~--~~k~~~~~~k~-------~~~~~~~l~~~~~~~~~~~~~~~  215 (319)
                      +.|+|+.+|++..+..+++.||.++..++|..+...-  ...........       .......++.+...|+..+.++.
T Consensus         2 e~~~m~~~E~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~   81 (168)
T d1kt1a1           2 ESWEMDTKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYT   81 (168)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred             CcccCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcc
Confidence            4699999999999999999999999999886544321  11111111111       11112233333344778889999


Q ss_pred             hhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHHHHH
Q psy5048         216 PSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGS  287 (319)
Q Consensus       216 ~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~  287 (319)
                      .|+..|+.+|..+|       +|++|+||||+.+..++++.        +++++|+|+.+..+|..|..+..++++++++
T Consensus        82 ~Ai~~~~~al~l~p-------~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~e~~kk  154 (168)
T d1kt1a1          82 KAVECCDKALGLDS-------ANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQKKAKEHNERDRR  154 (168)
T ss_dssp             HHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhhhhhhhccc-------chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhHHHHHHH
Confidence            99999999999999       99999999999888888886        9999999999999999999999999999999


Q ss_pred             HHHhcccCCCC
Q psy5048         288 LYFFLFYNMSS  298 (319)
Q Consensus       288 ~y~~mF~~~~~  298 (319)
                      +|++||.+...
T Consensus       155 ~~~~~f~~~~~  165 (168)
T d1kt1a1         155 TYANMFKKFAE  165 (168)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHhhhhh
Confidence            99999987654

>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: FKBP52 (FKBP4), C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=5.2e-17  Score=136.68  Aligned_cols=153  Identities=12%  Similarity=0.071  Sum_probs=119.6

Q ss_pred             hhccCccccchhhhhhhhcCCcccccchHHHHHHH--Hhhhhhcc--cCCcc-hhHH----HHHHHhhHHHHHHhcccch
Q psy5048         146 FLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARR--DRGKRRIQ--SFKPH-RAES----EKLYAHCSSAYALLVKKTP  216 (319)
Q Consensus       146 ~~~m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~--~~~k~~~~--~~k~~-~~~~----~~l~~~~~~~~~~~~~~~~  216 (319)
                      .|+|+.++++..+..+++.||.++..++|..+...  ........  .+... ....    ..++.+.-.|+.++..+..
T Consensus         1 ~~~~~~~ek~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~   80 (170)
T d1p5qa1           1 SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSA   80 (170)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhccc
Confidence            49999999999999999999999999988754431  11111111  11111 1111    1222222336678899999


Q ss_pred             hHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHHHHHH
Q psy5048         217 SIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGSL  288 (319)
Q Consensus       217 a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~~  288 (319)
                      |+..|..++..+|       +|++||||+|..+..+++|+        |++++|+|+++..+|..+.++++++.++|+++
T Consensus        81 A~~~~~~al~~~p-------~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~  153 (170)
T d1p5qa1          81 AIESCNKALELDS-------NNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKL  153 (170)
T ss_dssp             HHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhhhhhccc-------cchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999       99999999999887788886        99999999999999999999999999999999


Q ss_pred             HHhcccCCCCCCchhhh
Q psy5048         289 YFFLFYNMSSPLNKVNA  305 (319)
Q Consensus       289 y~~mF~~~~~~~~~~~~  305 (319)
                      |.+||..+....+|.+|
T Consensus       154 ~~~~f~~~~~~~~~~~~  170 (170)
T d1p5qa1         154 YANMFERLAEEENKAKA  170 (170)
T ss_dssp             HHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHhcchhhhcC
Confidence            99999998877766654

>d1ix5a_ d.26.1.1 (A:) Archaeal FKBP {Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Archaeal FKBP
species: Archaeon Methanococcus thermolithotrophicus [TaxId: 2186]

Probab=99.53  E-value=2.6e-15  Score=124.72  Aligned_cols=73  Identities=29%  Similarity=0.491  Sum_probs=65.5

Q ss_pred             CCCCCcEEEEEEEEEEeCCcEEeeecc-------------CCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCC
Q psy5048          48 PYVNVKICVSSFKPTFKLTLVAMRIHD-------------RDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALA  114 (319)
Q Consensus        48 p~~~~~v~v~~y~~~l~dg~v~d~s~~-------------~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~a  114 (319)
                      ...|+.|.+| |++++.||++||+|++             .++|++|++|.++++||||++|.+|++|+++.|+|||+.|
T Consensus         2 v~~G~~V~v~-Y~~~~~~G~~fdsT~e~~~~~~~~~~~~~~~~P~~f~~G~g~~ipglE~al~gm~~Ge~~~v~i~p~~a   80 (151)
T d1ix5a_           2 VDKGVKIKVD-YIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKA   80 (151)
T ss_dssp             CCTTCEEEEC-CEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTS
T ss_pred             ccCCCEEEEE-EEEEECCCCEEEeCchHhcccccccccccCCCCEEEEecCCCccHHHHHHHHhhcCCceeEEEeCHHHh
Confidence            3567888886 9999999999999864             3469999999999999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy5048         115 YGDRGAG  121 (319)
Q Consensus       115 yG~~g~~  121 (319)
                      ||..+..
T Consensus        81 yG~~d~~   87 (151)
T d1ix5a_          81 YGNRNEM   87 (151)
T ss_dssp             SCSCCST
T ss_pred             ccccccC
Confidence            9987643

>d1hxva_ d.26.1.1 (A:) Trigger factor PPIase domain {Mycoplasma genitalium [TaxId: 2097]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Mycoplasma genitalium [TaxId: 2097]

Probab=99.47  E-value=3.6e-14  Score=106.47  Aligned_cols=84  Identities=17%  Similarity=0.199  Sum_probs=74.4

Q ss_pred             CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCCCCC
Q psy5048          48 PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG  127 (319)
Q Consensus        48 p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~Ip~~  127 (319)
                      +..||.|++. |++++ ||++|+++..  ..+.|.+|.+.++|||+++|.+|++|+++.|.|+++.+|+..+.     +|
T Consensus         2 ~a~GD~V~id-y~g~~-dG~~~~~~~~--~~~~~~lg~~~~ipgf~~~l~g~~~Ge~~~~~i~~p~~y~~~~l-----aG   72 (85)
T d1hxva_           2 LANGDIAIID-FTGIV-DNKKLASASA--QNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL-----QS   72 (85)
T ss_dssp             CCSSEEEEEE-EEEEE-TTEECSTTCC--SEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG-----GS
T ss_pred             CCCCCEEEEE-EEEEE-CCEEcccccc--cCCCEEECCcccCchHHHHhccCcCCCeEEEEEEChhhcCcccC-----CC
Confidence            5678888885 99997 9999988643  46899999999999999999999999999999999999998775     45


Q ss_pred             CeEEEEEEEeeee
Q psy5048         128 LSAVRQSEHSELE  140 (319)
Q Consensus       128 ~~l~feVeL~~v~  140 (319)
                      +++.|+|+|++|+
T Consensus        73 k~~~f~V~v~~Vk   85 (85)
T d1hxva_          73 KPVTFEVVLKAIK   85 (85)
T ss_dssp             CCCEEEEEECCBC
T ss_pred             CcEEEEEEEEEeC
Confidence            8999999999874

>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Putative 70 kda peptidylprolyl isomerase PFL2275c
species: Plasmodium falciparum [TaxId: 5833]

Probab=99.41  E-value=1.3e-13  Score=113.53  Aligned_cols=132  Identities=6%  Similarity=-0.061  Sum_probs=100.0

Q ss_pred             chhhccCccccchhhhhhhhcCCcccccchHHHHHHHH--hhhhhcccCC-cch-------hHHHHHHHhhHHHHHHhcc
Q psy5048         144 KFFLELIPNKFLHWDRRFTQKGPMAKNREHIAHRARRD--RGKRRIQSFK-PHR-------AESEKLYAHCSSAYALLVK  213 (319)
Q Consensus       144 ~~~~~m~~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~--~~k~~~~~~k-~~~-------~~~~~l~~~~~~~~~~~~~  213 (319)
                      .+.|+|+.+|++..+..++++||.++..++|..+...-  .......... ...       .....++.+.-.|+..+..
T Consensus         3 ~~~~~~~~~e~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~   82 (153)
T d2fbna1           3 KSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKD   82 (153)
T ss_dssp             CSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcc
Confidence            35799999999999999999999999999887554311  1111111110 010       1111222233336678899


Q ss_pred             cchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhH
Q psy5048         214 KTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHM  282 (319)
Q Consensus       214 ~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~  282 (319)
                      +..|+..|..+|+.+|       +|+|||||+|+.+..++++.        +++++|+|.++...|..+.+++++++
T Consensus        83 ~~~Al~~~~~al~~~p-------~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~kl~~~~  152 (153)
T d2fbna1          83 YPKAIDHASKVLKIDK-------NNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEAR  152 (153)
T ss_dssp             HHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhhhhhccccccc-------hhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHC
Confidence            9999999999999999       99999999999888888886        99999999999999999999987764

>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Cyclophilin 40
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.04  E-value=7.7e-11  Score=97.54  Aligned_cols=132  Identities=10%  Similarity=0.019  Sum_probs=95.2

Q ss_pred             ccccchhhhhhhhcCCcccccchHHHHHHH--Hhhhh---hcccCCc-----chhHHHHHHHhhHHHHHHhcccchhHhH
Q psy5048         151 PNKFLHWDRRFTQKGPMAKNREHIAHRARR--DRGKR---RIQSFKP-----HRAESEKLYAHCSSAYALLVKKTPSIHN  220 (319)
Q Consensus       151 ~eek~~~a~~~ke~Gn~~~~~~~~~~~~~~--~~~k~---~~~~~k~-----~~~~~~~l~~~~~~~~~~~~~~~~a~~~  220 (319)
                      .+..+..+...++.|+.++..++|..+...  ...+.   .......     .......++.+.-.++..+..+..|+..
T Consensus        20 ~~~~~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~   99 (169)
T d1ihga1          20 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDS   99 (169)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChhhHHHHHHHHHHHHhhcccchhhhh
Confidence            334455678889999999888887643221  11100   0000000     0111112222223356778999999999


Q ss_pred             HhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHhHHHHHHHH
Q psy5048         221 CFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGHMITQGSLY  289 (319)
Q Consensus       221 c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~~~kek~~y  289 (319)
                      |+.+|+.+|       +|++||||||.++..++.++        |++++|.|.+|...|..+.++++.+++++|++|
T Consensus       100 ~~~al~~~p-------~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l~~~~~~l~~~~~~~k~~y  169 (169)
T d1ihga1         100 CLEALEIDP-------SNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAY  169 (169)
T ss_dssp             HHHHHTTCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             hhhhhhhhh-------hhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999       99999999999888888886        999999999999999999999999999999865

>d1l1pa_ d.26.1.1 (A:) Trigger factor PPIase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Escherichia coli [TaxId: 562]

Probab=98.93  E-value=1e-09  Score=85.02  Aligned_cols=87  Identities=15%  Similarity=0.216  Sum_probs=70.8

Q ss_pred             CCCC-CCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCCC
Q psy5048          47 KPYV-NVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP  125 (319)
Q Consensus        47 ~p~~-~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~Ip  125 (319)
                      +|.. ||.|++ +|+++. ||+.+++..  ...+.|.+|.+.+++||+++|.||++|+...|.+..+..|......    
T Consensus        13 r~a~~GD~v~i-d~~~~~-dG~~~~~~~--~~~~~~~lg~~~~~~gf~~~L~G~k~Ge~~~~~~~~P~d~~~~~la----   84 (106)
T d1l1pa_          13 GAVEAEDRVTI-DFTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLK----   84 (106)
T ss_dssp             SSCCTTEEEEE-EEECCS-SSSCCSTTE--EEEEEEEETTSCCCTTHHHHTTSCCTTCCEEEEECCCSSCCCTTTT----
T ss_pred             ccccCCCEEEE-EEEEEE-CCEECCCCc--ccceEEEecCCCccchHHHHhcCCCCCceEEEEEEeCCCCCchhhC----
Confidence            4544 555555 699875 898776532  2368999999999999999999999999999999988888776654    


Q ss_pred             CCCeEEEEEEEeeeeec
Q psy5048         126 GGLSAVRQSEHSELEIS  142 (319)
Q Consensus       126 ~~~~l~feVeL~~v~~~  142 (319)
                       +.++.|+|+|++|...
T Consensus        85 -GK~v~f~V~v~~i~~~  100 (106)
T d1l1pa_          85 -GKAAKFAINLKKVEER  100 (106)
T ss_dssp             -TCCEEEEEEEEEEECC
T ss_pred             -CCEEEEEEEEEEeccc
Confidence             4899999999999853

>d1t11a3 d.26.1.1 (A:135-247) Trigger factor PPIase domain {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Trigger factor PPIase domain
species: Vibrio cholerae [TaxId: 666]

Probab=98.87  E-value=8.3e-10  Score=86.48  Aligned_cols=85  Identities=14%  Similarity=0.230  Sum_probs=71.4

Q ss_pred             CCCCCcEEEEEEEEEEeCCcEEeeeccCCCCeEEeeCCCcccccHhHhhhccccCcEEEEEeCCCCCCCCCCCCCCCCCC
Q psy5048          48 PYVNVKICVSSFKPTFKLTLVAMRIHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGG  127 (319)
Q Consensus        48 p~~~~~v~v~~y~~~l~dg~v~d~s~~~~~p~~f~lG~~~~i~Gle~al~~Mk~GE~~~v~i~p~~ayG~~g~~~~Ip~~  127 (319)
                      +..||.|++ +|.++. ||+.++....  ..+.|.+|.+.+++||+++|.||++|+++.|.++.+..|......     |
T Consensus        24 a~~gD~v~i-d~~~~~-dG~~~~~~~~--~~~~~~lg~~~~~~~f~~~L~G~k~Ge~~~~~~~~Ped~~~~~la-----G   94 (113)
T d1t11a3          24 AENGKRVSI-DFVGSI-DGVEFEGGKA--ENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLK-----G   94 (113)
T ss_dssp             CCTTCEEEE-EEEEES-SSSCCTTCEE--EEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTTS-----S
T ss_pred             ccCCCEEEE-EEEEEE-CCEEccCCcc--ceEEEEeccccccccHHHhhcCCcCCCEEEEEEeCCCcCCccccC-----C
Confidence            456666666 699986 8887765432  369999999999999999999999999999999988888876664     4


Q ss_pred             CeEEEEEEEeeeee
Q psy5048         128 LSAVRQSEHSELEI  141 (319)
Q Consensus       128 ~~l~feVeL~~v~~  141 (319)
                      .++.|.|+|++|+.
T Consensus        95 k~~~f~v~v~~Ik~  108 (113)
T d1t11a3          95 KAAKFAIKVNKVEA  108 (113)
T ss_dssp             CEEEECCCEEEEEE
T ss_pred             CeEEEEEEEEEEEe
Confidence            89999999999985

>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Hop
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=1.8e-07  Score=72.27  Aligned_cols=107  Identities=16%  Similarity=0.101  Sum_probs=81.7

Q ss_pred             hhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCC
Q psy5048         158 DRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQS  237 (319)
Q Consensus       158 a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~  237 (319)
                      +..++++||.++..+++..+... ..+...  ..|..   ..++..+-.++..+.++..|+..|..++..+|       +
T Consensus         3 ~~~l~~~g~~~~~~g~~~eAi~~-~~~al~--~~p~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p-------~   69 (117)
T d1elwa_           3 VNELKEKGNKALSVGNIDDALQC-YSEAIK--LDPHN---HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP-------D   69 (117)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHH-HHHHHH--HCTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-------T
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHH-HHHHHh--cCCcc---hhhhhcccccccccccccccchhhhhHHHhcc-------c
Confidence            56688899999999988755431 111111  11122   23444445577888999999999999999999       9


Q ss_pred             ChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048         238 TIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH  277 (319)
Q Consensus       238 NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~  277 (319)
                      |.+|+|++|..+..++.++        +++++|+|+++...|.+++.|
T Consensus        70 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~l~~r  117 (117)
T d1elwa_          70 WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEAR  117 (117)
T ss_dssp             CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhCc
Confidence            9999999999888788886        999999999999999998753

>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Protein phosphatase 5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=4.9e-07  Score=73.02  Aligned_cols=116  Identities=9%  Similarity=-0.026  Sum_probs=85.7

Q ss_pred             cccchhhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhcccccc
Q psy5048         152 NKFLHWDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLT  231 (319)
Q Consensus       152 eek~~~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~  231 (319)
                      ++.++.+..++.+||.++..++|..+... ..+.....  |..   ...+..+-.++..+..+..|+..|.++++.+|  
T Consensus         4 ~~~l~~a~~l~~~gn~~~~~~~y~~A~~~-~~~al~~~--p~~---~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p--   75 (159)
T d1a17a_           4 DGALKRAEELKTQANDYFKAKDYENAIKF-YSQAIELN--PSN---AIYYGNRSLAYLRTECYGYALGDATRAIELDK--   75 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCHHHHHHH-HHHHHHHS--TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCHHHHHHH-hhhccccc--hhh---hhhhhhhHHHHHhccccchHHHHHHHHHHHcc--
Confidence            34567789999999999999988754421 11111111  111   12333333466777999999999999999999  


Q ss_pred             ccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhH
Q psy5048         232 FARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRG  280 (319)
Q Consensus       232 ~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~  280 (319)
                           ++++|++++|..+..+++++        +++++|+|..+...|..+....+.
T Consensus        76 -----~~~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~  127 (159)
T d1a17a_          76 -----KYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQ  127 (159)
T ss_dssp             -----TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred             -----cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence                 99999999999888888886        899999999999888877654433

>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: STIP1 homology and U box-containing protein 1, STUB1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.87  E-value=5.4e-06  Score=67.89  Aligned_cols=95  Identities=12%  Similarity=0.112  Sum_probs=70.7

Q ss_pred             hhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCC
Q psy5048         158 DRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQS  237 (319)
Q Consensus       158 a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~  237 (319)
                      +..+++.||.++..++|..+...- .+....  .|..   ..++.+.-.|+..+..+..|+..|.+++..+|       +
T Consensus         4 a~~l~~~Gn~~~~~g~~~~Ai~~~-~kal~~--~p~~---~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p-------~   70 (201)
T d2c2la1           4 AQELKEQGNRLFVGRKYPEAAACY-GRAITR--NPLV---AVYYTNRALCYLKMQQPEQALADCRRALELDG-------Q   70 (201)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHH-HHHHHH--CSCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCT-------T
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHH-HHHHHh--CCCC---HHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCC-------C
Confidence            567899999999999997654321 111111  1111   23444445577888999999999999999999       9


Q ss_pred             ChhHHHHHHHHHHhcCccc--------cccCCCChh
Q psy5048         238 TIPAWTHDYTRLALLLPFL--------QYEFPPEQS  265 (319)
Q Consensus       238 NvKALfRrg~~~~~~~~~~--------a~~~dP~n~  265 (319)
                      |++|+|++|..+..++.|+        |++++|+++
T Consensus        71 ~~~a~~~lg~~~~~l~~~~~A~~~~~~al~l~p~~~  106 (201)
T d2c2la1          71 SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQR  106 (201)
T ss_dssp             CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccH
Confidence            9999999999888888886        788888743

>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Hop
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00037  Score=53.62  Aligned_cols=111  Identities=7%  Similarity=-0.041  Sum_probs=75.6

Q ss_pred             hhhhhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCC
Q psy5048         157 WDRRFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQ  236 (319)
Q Consensus       157 ~a~~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~  236 (319)
                      -|...++.||.++..+.|..+...- .+...  ..|..   .....++-.++..+..|..|+..|.++++.+|       
T Consensus         3 ~a~~~k~~G~~~~~~~~y~~Ai~~y-~~al~--~~p~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~-------   69 (128)
T d1elra_           3 QALKEKELGNDAYKKKDFDTALKHY-DKAKE--LDPTN---MTYITNQAAVYFEKGDYNKCRELCEKAIEVGR-------   69 (128)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHH-HHHHH--HCTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-------
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHH-HHHHH--hCccc---HHHHHhHHHHHHHcCchHHHHHHHHHHHHhCc-------
Confidence            3567789999999999886554321 11111  11221   12444455677888999999999999999888       


Q ss_pred             CCh-------hHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhHh
Q psy5048         237 STI-------PAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRGH  281 (319)
Q Consensus       237 ~Nv-------KALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~~  281 (319)
                      +|.       ++|+|.|..+..++.+.        ++..+|. .++...+..+.+.++++
T Consensus        70 ~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~~~k~lkeq  128 (128)
T d1elra_          70 ENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT-PDVLKKCQQAEKILKEQ  128 (128)
T ss_dssp             HSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHhCC
Confidence            664       57777777666667775        6666664 57778888777776653

>d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein (MIP) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Macrophage infectivity potentiator protein (MIP)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.16  E-value=0.0012  Score=53.49  Aligned_cols=27  Identities=26%  Similarity=0.359  Sum_probs=24.9

Q ss_pred             cccCCCCCCCCCCCCCCCCCCeeecccceEE
Q psy5048           7 LPFGENRNPFYKTPCIRPRSTLSLSPYSLSL   37 (319)
Q Consensus         7 ~~~g~~g~~~~~~p~Ipp~atl~~d~~lv~~   37 (319)
                      |+||..|++    +.||||++|.|+++++++
T Consensus       112 laYG~~g~~----~~IPp~s~LifeIeLl~i  138 (160)
T d1jvwa_         112 LAYGVTGGG----GMIPPYSPLEFDVELISI  138 (160)
T ss_dssp             GTTTTTCSS----SSSCTTCCEEEEEEEEEE
T ss_pred             HCcCCCCCC----CCcCcCCcEEEEEEEEEE
Confidence            789999977    789999999999999986

>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Mitochondria fission protein Fis1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.85  E-value=0.0063  Score=46.43  Aligned_cols=60  Identities=12%  Similarity=-0.101  Sum_probs=50.4

Q ss_pred             ccchhHhHHhhhhccccccccCCCCC--hhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHh
Q psy5048         213 KKTPSIHNCFLLSTKSMLTFARNQST--IPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQR  279 (319)
Q Consensus       213 ~~~~a~~~c~~vl~~~~l~~~~~~~N--vKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k  279 (319)
                      .+..|+..+..++..+|       .+  +.|||-.|..+..+++|+        +++++|+|..+...+..+.++++
T Consensus        51 d~~~Ai~~l~~~l~~~~-------~~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~~~A~~l~~~I~~~~~  120 (122)
T d1nzna_          51 DIRKGIVLLEELLPKGS-------KEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMK  120 (122)
T ss_dssp             HHHHHHHHHHHHTTTSC-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccC-------CchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHc
Confidence            44568999999998776       55  559999999888889987        99999999999998888877664

>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.80  E-value=0.0018  Score=49.27  Aligned_cols=30  Identities=20%  Similarity=0.099  Sum_probs=25.7

Q ss_pred             cccCCCCCCCCCCCCCCCCCCeeecccceEEEE
Q psy5048           7 LPFGENRNPFYKTPCIRPRSTLSLSPYSLSLIL   39 (319)
Q Consensus         7 ~~~g~~g~~~~~~p~Ipp~atl~~d~~lv~~~i   39 (319)
                      |+||..|+|.   ..|||+++|.|+++++++.-
T Consensus        85 ~ayG~~g~~~---~~Ipp~s~l~f~veL~~~~~  114 (117)
T d1q1ca2          85 YAFGSVGKEK---FQIPPNAELKYELHLKSFEK  114 (117)
T ss_dssp             GTTTTTCBGG---GTBCTTCCEEEEEEEEEEEC
T ss_pred             HhCcccCCCC---CccCcCCeEEEEEEEEEEEe
Confidence            7899999872   37999999999999998853

>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.79  E-value=0.01  Score=44.04  Aligned_cols=69  Identities=10%  Similarity=-0.044  Sum_probs=59.0

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhH
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRG  280 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~  280 (319)
                      ....++..|+....+++..+|       +|+.|++.+|..+...+.+.        |++++|++.++...|..+-..+.+
T Consensus        27 ~~~g~~~~A~~~~~~al~~~p-------~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~y~~~g~   99 (112)
T d1hxia_          27 LKLANLAEAALAFEAVCQKEP-------EREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHN   99 (112)
T ss_dssp             HHTTCHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhHHHHHHHhhhccccc-------ccchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHHHHHCCC
Confidence            556888899999999999999       99999999999777777775        999999999999888888777766


Q ss_pred             hHHH
Q psy5048         281 HMIT  284 (319)
Q Consensus       281 ~~~k  284 (319)
                      ..+-
T Consensus       100 ~~~A  103 (112)
T d1hxia_         100 ANAA  103 (112)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5544

>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: STIP1 homology and U box-containing protein 1, STUB1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.55  E-value=0.0095  Score=47.49  Aligned_cols=69  Identities=9%  Similarity=-0.134  Sum_probs=57.4

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      ++-..+.+..|+...+++++.+|       +|..+++.+|..+..+++++        |++++|++..+..-|..+-.++
T Consensus        13 ~~~~~g~~~~Ai~~~~kal~~~p-------~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~~~~l   85 (201)
T d2c2la1          13 RLFVGRKYPEAAACYGRAITRNP-------LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEM   85 (201)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCS-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHT
T ss_pred             HHHHcCCHHHHHHHHHHHHHhCC-------CCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHHHHHC
Confidence            44577899999999999999999       99999999999888888886        9999999988776666665555


Q ss_pred             hHhH
Q psy5048         279 RGHM  282 (319)
Q Consensus       279 k~~~  282 (319)
                      ..+.
T Consensus        86 ~~~~   89 (201)
T d2c2la1          86 ESYD   89 (201)
T ss_dssp             TCHH
T ss_pred             CCHH
Confidence            4433

>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Mitochondrial import receptor subunit tom20-3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.31  E-value=0.0064  Score=47.53  Aligned_cols=65  Identities=12%  Similarity=-0.072  Sum_probs=51.3

Q ss_pred             cccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCc-----------cc--------cccCCCChhhHHHHHH
Q psy5048         212 VKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLP-----------FL--------QYEFPPEQSQCLPLLG  272 (319)
Q Consensus       212 ~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~-----------~~--------a~~~dP~n~~i~~el~  272 (319)
                      ..+..|+..+.++++.+|       +|..|+|.+|..+..++.           |.        |++++|+|..++.-|.
T Consensus        55 ~~~~~Ai~~~~kAl~l~P-------~~~~a~~~lG~~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~~~~~~L~  127 (145)
T d1zu2a1          55 QMIQEAITKFEEALLIDP-------KKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLE  127 (145)
T ss_dssp             HHHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcc-------hhhHHHhhHHHHHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHHHHHHHHH
Confidence            456779999999999999       999999999996654322           11        9999999999999888


Q ss_pred             HHHHHHhHhHH
Q psy5048         273 IRAQHQRGHMI  283 (319)
Q Consensus       273 ~l~~~~k~~~~  283 (319)
                      .+.+...-+.+
T Consensus       128 ~~~ka~~~~~e  138 (145)
T d1zu2a1         128 MTAKAPQLHAE  138 (145)
T ss_dssp             HHHTHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            87765544444

>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Lipoprotein NlpI
species: Escherichia coli [TaxId: 562]

Probab=94.61  E-value=0.085  Score=43.16  Aligned_cols=62  Identities=8%  Similarity=-0.224  Sum_probs=38.8

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRA  275 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~  275 (319)
                      ++..+.++..|+..+..++..+|       +|..|++++|..+..++.+.        +++++|.+.....-+....
T Consensus        80 ~~~~~g~~~~A~~~~~~al~~~p-------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~  149 (259)
T d1xnfa_          80 YLTQAGNFDAAYEAFDSVLELDP-------TYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAE  149 (259)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHh-------hhhhhHHHHHHHHHHHhhHHHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence            44555666667777777777666       77777777777555555554        6667777665555444333

>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: CT2138-like
domain: Hypothetical protein CT2138
species: Chlorobium tepidum [TaxId: 1097]

Probab=94.01  E-value=0.0042  Score=48.89  Aligned_cols=66  Identities=17%  Similarity=-0.147  Sum_probs=45.6

Q ss_pred             HHHhhHHHHHHhcccchhHhHHhhhhccccccccC----CCCChhHHHHHHHHHHhcCccc--------cccCCCChh
Q psy5048         200 LYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFAR----NQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQS  265 (319)
Q Consensus       200 l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~----~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~  265 (319)
                      .+.++-.++..+..+..++..|...|...+=....    .+...+||||||..+..++.++        |+++.|+..
T Consensus        57 ~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~  134 (156)
T d2hr2a1          57 CHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK  134 (156)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHcCccchhhHhhhhhhhcccccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhh
Confidence            33344457788899999999999998743300000    1134679999999888888886        777777643

>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: O-GlcNAc transferase p110 subunit, OGT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.68  E-value=0.055  Score=45.99  Aligned_cols=61  Identities=7%  Similarity=-0.129  Sum_probs=48.8

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIR  274 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l  274 (319)
                      ++....++..|+....++++.+|       +|..+++.+|..+...++++        |++++|++.++...|..+
T Consensus       314 ~~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~lg~~  382 (388)
T d1w3ba_         314 IKREQGNIEEAVRLYRKALEVFP-------EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNT  382 (388)
T ss_dssp             HHHTTTCHHHHHHHHHHHTTSCT-------TCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred             HHHHCCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence            33455777888999999988888       99999999999777777775        889999998887766554

>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Protein phosphatase 5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.56  E-value=0.056  Score=41.90  Aligned_cols=67  Identities=6%  Similarity=-0.182  Sum_probs=54.5

Q ss_pred             HHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHh
Q psy5048         208 YALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQR  279 (319)
Q Consensus       208 ~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k  279 (319)
                      +-....+..|+...++++..+|       +|..+++.+|..+..++.++        |++++|.+..+...+..+-..+.
T Consensus        20 ~~~~~~y~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~g~~~~~~g   92 (159)
T d1a17a_          20 YFKAKDYENAIKFYSQAIELNP-------SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALG   92 (159)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHST-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred             HHHcCCHHHHHHHhhhccccch-------hhhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHHHHHHHHcC
Confidence            3567889999999999999999       99999999999777777776        89999999877766655554444


Q ss_pred             Hh
Q psy5048         280 GH  281 (319)
Q Consensus       280 ~~  281 (319)
                      .+
T Consensus        93 ~~   94 (159)
T d1a17a_          93 KF   94 (159)
T ss_dssp             CH
T ss_pred             CH
Confidence            33

>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Hop
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.19  E-value=0.069  Score=39.42  Aligned_cols=68  Identities=3%  Similarity=-0.101  Sum_probs=57.3

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhH
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRG  280 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~  280 (319)
                      -...++..|+..++.++..+|       +|..+++-+|..+..+++++        +++++|.+..+..-+..+-.++..
T Consensus        14 ~~~g~~~eAi~~~~~al~~~p-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~   86 (117)
T d1elwa_          14 LSVGNIDDALQCYSEAIKLDP-------HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNR   86 (117)
T ss_dssp             HHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred             HHcCCHHHHHHHHHHHHhcCC-------cchhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHHHHHccC
Confidence            466889999999999999999       99999999999777778886        999999999888777777666554


Q ss_pred             hHH
Q psy5048         281 HMI  283 (319)
Q Consensus       281 ~~~  283 (319)
                      ..+
T Consensus        87 ~~~   89 (117)
T d1elwa_          87 FEE   89 (117)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Lipoprotein NlpI
species: Escherichia coli [TaxId: 562]

Probab=92.73  E-value=0.091  Score=42.96  Aligned_cols=68  Identities=12%  Similarity=-0.081  Sum_probs=58.0

Q ss_pred             HHHHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHH
Q psy5048         205 SSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQ  276 (319)
Q Consensus       205 ~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~  276 (319)
                      -.++..+..+..|+....++|..+|       +|+.|++++|..+..++.++        |++++|++.++...+..+-.
T Consensus        44 G~~y~~~g~~~~A~~~~~~al~l~p-------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~  116 (259)
T d1xnfa_          44 GVLYDSLGLRALARNDFSQALAIRP-------DMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALY  116 (259)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHHhhccCC-------CCHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHHHHHH
Confidence            3467788999999999999999999       99999999999888788886        99999999988877776654


Q ss_pred             HHh
Q psy5048         277 HQR  279 (319)
Q Consensus       277 ~~k  279 (319)
                      ...
T Consensus       117 ~~g  119 (259)
T d1xnfa_         117 YGG  119 (259)
T ss_dssp             HTT
T ss_pred             HHh
Confidence            443

>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.16  E-value=0.052  Score=43.90  Aligned_cols=89  Identities=9%  Similarity=-0.007  Sum_probs=59.9

Q ss_pred             hhhhcCCcccccchHHHHHHHHhhhhhcccCCcchhHHHHHHHhhHHHHHHhcccchhHhHHhhhhccccccccCCCCCh
Q psy5048         160 RFTQKGPMAKNREHIAHRARRDRGKRRIQSFKPHRAESEKLYAHCSSAYALLVKKTPSIHNCFLLSTKSMLTFARNQSTI  239 (319)
Q Consensus       160 ~~ke~Gn~~~~~~~~~~~~~~~~~k~~~~~~k~~~~~~~~l~~~~~~~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~Nv  239 (319)
                      .+..+|..++..+++..+...- .+.  ...  + .   .+..++-.++..+..+..|+..++++++.+|       +++
T Consensus         7 ~l~~~g~~~~~~~d~~~Al~~~-~~i--~~~--~-~---~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp-------~~~   70 (192)
T d1hh8a_           7 SLWNEGVLAADKKDWKGALDAF-SAV--QDP--H-S---RICFNIGCMYTILKNMTEAEKAFTRSINRDK-------HLA   70 (192)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHH-HTS--SSC--C-H---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------TCH
T ss_pred             HHHHHHHHHHHCCCHHHHHHHH-Hhc--CCC--C-H---HHHHHHHHHHHHcCCchhHHHHHHHHHHHhh-------hhh
Confidence            3445666777777775544221 111  111  1 1   1233344466888999999999999999999       999


Q ss_pred             hHHHHHHHHHHhcCccc--------cccCCCCh
Q psy5048         240 PAWTHDYTRLALLLPFL--------QYEFPPEQ  264 (319)
Q Consensus       240 KALfRrg~~~~~~~~~~--------a~~~dP~n  264 (319)
                      .|+|.||..+..+++|+        |++..|.|
T Consensus        71 ~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n  103 (192)
T d1hh8a_          71 VAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGN  103 (192)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred             hhHHHHHHHHHhhccHHHHHHHHHHHHHhCccC
Confidence            99999999777788776        56555554

>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: O-GlcNAc transferase p110 subunit, OGT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.64  E-value=0.095  Score=44.42  Aligned_cols=61  Identities=8%  Similarity=-0.080  Sum_probs=39.1

Q ss_pred             HhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048         210 LLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH  277 (319)
Q Consensus       210 ~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~  277 (319)
                      ..+++..|+..|..+++.+|       +|+.+++.+|..+...++++        +++++|.+.++...|..+-.+
T Consensus        11 ~~G~~~~A~~~~~~~l~~~p-------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~   79 (388)
T d1w3ba_          11 QAGDFEAAERHCMQLWRQEP-------DNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKE   79 (388)
T ss_dssp             HHTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred             HcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhh
Confidence            34566667777777777666       77777777777555555554        666777776666555554433

>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.59  E-value=0.097  Score=37.22  Aligned_cols=71  Identities=6%  Similarity=-0.263  Sum_probs=51.1

Q ss_pred             HHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHH
Q psy5048         208 YALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQ  278 (319)
Q Consensus       208 ~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~  278 (319)
                      +.....+..|+....+++...+-......+...+|+-.|..+...++++        |++++|++..+..-|..+.+.+
T Consensus        15 ~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~Nl~~~~~~l   93 (95)
T d1tjca_          15 AYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEYIM   93 (95)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred             HHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHh
Confidence            3455777788888888877554111122244678888998777778876        9999999999998888777654

>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Hop
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.93  E-value=0.035  Score=41.82  Aligned_cols=59  Identities=5%  Similarity=-0.137  Sum_probs=49.8

Q ss_pred             HHHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHH
Q psy5048         207 AYALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLG  272 (319)
Q Consensus       207 ~~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~  272 (319)
                      ++-....|..|+..-+.+|+.+|       +|.-+++-||..+..+++|+        |++++|.+..+...+.
T Consensus        13 ~~~~~~~y~~Ai~~y~~al~~~p-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a   79 (128)
T d1elra_          13 DAYKKKDFDTALKHYDKAKELDP-------TNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIA   79 (128)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred             HHHHcCCHHHHHHHHHHHHHhCc-------ccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHH
Confidence            44677899999999999999999       99999999999888788886        8889999876555443

>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Protein prenylyltransferase
family: Protein prenylyltransferase
domain: Protein farnesyltransferase alpha-subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.83  E-value=0.18  Score=43.62  Aligned_cols=62  Identities=6%  Similarity=-0.027  Sum_probs=44.3

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHH
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQH  277 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~  277 (319)
                      ..+..+..|+..++++++.+|       +|..|++.||..+..++.++        ++++||.|..+-.-+..+-.+
T Consensus       123 ~~l~~~~eAl~~~~kal~~dp-------~n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~p~n~~a~~~r~~~l~~  192 (315)
T d2h6fa1         123 EWLRDPSQELEFIADILNQDA-------KNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN  192 (315)
T ss_dssp             HHHTCCTTHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred             HhhccHHHHHHHHhhhhhhhh-------cchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHCCccHHHHHHHHHHHHH
Confidence            445677778888888888777       88888888888666666665        778888877776665555443

>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Protein prenylyltransferase
family: Protein prenylyltransferase
domain: Protein farnesyltransferase alpha-subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.59  E-value=0.26  Score=42.60  Aligned_cols=59  Identities=8%  Similarity=0.073  Sum_probs=35.2

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------------cccCCCChhhHHHHHHHH
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------------QYEFPPEQSQCLPLLGIR  274 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------------a~~~dP~n~~i~~el~~l  274 (319)
                      ..+..+..++..|+++++.+|       +|..|++-||..+..++.+.              |++++|+|..+-.-+..+
T Consensus       157 ~~~~~~~~Al~~~~~al~~~p-------~n~~a~~~r~~~l~~~~~~~~~~~~~~ai~~~~~al~~~P~~~~~~~~l~~l  229 (315)
T d2h6fa1         157 QEFKLWDNELQYVDQLLKEDV-------RNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGI  229 (315)
T ss_dssp             HHHTCCTTHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred             HHHHhhHHHHHHHHHHHHHCC-------ccHHHHHHHHHHHHHccccchhhhhHHhHHHHHHHHHhCCCchHHHHHHHHH
Confidence            444666666777777776666       67777776666433322210              566667666666666555

>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=90.00  E-value=0.11  Score=38.60  Aligned_cols=19  Identities=26%  Similarity=0.237  Sum_probs=17.4

Q ss_pred             CCCCCCCCeeecccceEEE
Q psy5048          20 PCIRPRSTLSLSPYSLSLI   38 (319)
Q Consensus        20 p~Ipp~atl~~d~~lv~~~   38 (319)
                      +.|||||+|.|+++++++.
T Consensus        93 ~~IPp~s~lif~ieLl~ik  111 (111)
T d1kt1a2          93 PKIPSNATLFFEVELLDFK  111 (111)
T ss_dssp             TTSCTTCCCEEEEEEEEEE
T ss_pred             CcCCcCCeEEEEEEEEEEC
Confidence            7899999999999999873

>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Mitochondrial import receptor subunit tom20-3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.64  E-value=0.23  Score=38.00  Aligned_cols=58  Identities=10%  Similarity=-0.062  Sum_probs=44.6

Q ss_pred             HhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCcc-----------------c-cccCCCChhhHHHHH
Q psy5048         210 LLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPF-----------------L-QYEFPPEQSQCLPLL  271 (319)
Q Consensus       210 ~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~-----------------~-a~~~dP~n~~i~~el  271 (319)
                      .+..+..|+.....++..+|       +|+.+|++.|..+..+..+                 + |+++||++.++..-|
T Consensus         9 r~~~fe~A~~~~e~al~~~P-------~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~l   81 (145)
T d1zu2a1           9 RILLFEQIRQDAENTYKSNP-------LDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCI   81 (145)
T ss_dssp             HHHHHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred             HHccHHHHHHHHHHHHhhCC-------cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhH
Confidence            44567889999999999999       9999999999855432221                 1 999999998877665


Q ss_pred             HHH
Q psy5048         272 GIR  274 (319)
Q Consensus       272 ~~l  274 (319)
                      -.+
T Consensus        82 G~~   84 (145)
T d1zu2a1          82 GNA   84 (145)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            544

>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.60  E-value=0.24  Score=41.70  Aligned_cols=65  Identities=14%  Similarity=0.003  Sum_probs=53.6

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhH
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRG  280 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~  280 (319)
                      ...+.+..|+.....+++.+|       +|+.|++..|..+..+++++        |++++|++..+...+..+-.....
T Consensus        30 ~~~g~~~~A~~~~~~al~~~P-------~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~  102 (323)
T d1fcha_          30 LQEGDLPNAVLLFEAAVQQDP-------KHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESL  102 (323)
T ss_dssp             HHTTCHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred             HHcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccccccccccccccc
Confidence            456788999999999999999       99999999999777777776        889999998888777666544433

>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an immunophilin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FK-506 binding protein (FKBP12), an immunophilin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.58  E-value=0.14  Score=37.70  Aligned_cols=20  Identities=30%  Similarity=0.333  Sum_probs=17.6

Q ss_pred             CCCCCCCCCCeeecccceEE
Q psy5048          18 KTPCIRPRSTLSLSPYSLSL   37 (319)
Q Consensus        18 ~~p~Ipp~atl~~d~~lv~~   37 (319)
                      ..+.|||||+|.|+++++++
T Consensus        87 ~~~~IPp~s~lif~ieL~~v  106 (107)
T d2ppna1          87 HPGIIPPHATLVFDVELLKL  106 (107)
T ss_dssp             BTTTBCTTCCEEEEEEEEEE
T ss_pred             CCCCCCcCCeEEEEEEEEEE
Confidence            35779999999999999876

>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP52, N-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.70  E-value=0.17  Score=38.02  Aligned_cols=21  Identities=24%  Similarity=0.324  Sum_probs=18.4

Q ss_pred             CCCCCCCCCCeeecccceEEE
Q psy5048          18 KTPCIRPRSTLSLSPYSLSLI   38 (319)
Q Consensus        18 ~~p~Ipp~atl~~d~~lv~~~   38 (319)
                      ..+.|||||+|.|+++++++.
T Consensus        98 ~~~~IPp~s~LifeIeLl~v~  118 (120)
T d1q1ca1          98 SPPKIPPNATLVFEVELFEFK  118 (120)
T ss_dssp             BTTTBCTTCCEEEEEEEEEEE
T ss_pred             CCCCCCcCCcEEEEEEEEEEe
Confidence            357899999999999999874

>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.34  E-value=0.7  Score=38.59  Aligned_cols=66  Identities=14%  Similarity=0.017  Sum_probs=46.5

Q ss_pred             HHHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHh
Q psy5048         208 YALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQR  279 (319)
Q Consensus       208 ~~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k  279 (319)
                      ......+..|+..+..++..+|       +|..+++.+|..+...+.++        +++++|.+..+..-|..+-.+..
T Consensus       182 ~~~~~~~~~A~~~~~~al~~~p-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g  254 (323)
T d1fcha_         182 FNLSGEYDKAVDCFTAALSVRP-------NDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLG  254 (323)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhhhhccccccccccc-------ccccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHHHHHCC
Confidence            3455667777888888877777       78888888888666666664        77788887777666666555544


Q ss_pred             H
Q psy5048         280 G  280 (319)
Q Consensus       280 ~  280 (319)
                      .
T Consensus       255 ~  255 (323)
T d1fcha_         255 A  255 (323)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: FKBP51, N-terminal domains
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=85.00  E-value=0.29  Score=36.04  Aligned_cols=18  Identities=22%  Similarity=0.137  Sum_probs=16.5

Q ss_pred             CCCCCCCeeecccceEEE
Q psy5048          21 CIRPRSTLSLSPYSLSLI   38 (319)
Q Consensus        21 ~Ipp~atl~~d~~lv~~~   38 (319)
                      .|||||+|.|+++++++.
T Consensus        96 ~Ipp~a~l~f~ieLl~~~  113 (115)
T d1kt1a3          96 GIEPNAELIYEVTLKSFE  113 (115)
T ss_dssp             TBCTTCCEEEEEEEEEEE
T ss_pred             CcCcCCeEEEEEEEEEEE
Confidence            699999999999999874

>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: FKBP-like
superfamily: FKBP-like
family: FKBP immunophilin/proline isomerase
domain: Calcineurin (FKBP12.6)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.45  E-value=0.26  Score=36.40  Aligned_cols=18  Identities=33%  Similarity=0.324  Sum_probs=16.6

Q ss_pred             CCCCCCCCeeecccceEE
Q psy5048          20 PCIRPRSTLSLSPYSLSL   37 (319)
Q Consensus        20 p~Ipp~atl~~d~~lv~~   37 (319)
                      +.||||++|.|+++++++
T Consensus        95 ~~IP~~s~Lif~ieLl~I  112 (113)
T d1yata_          95 GLIPPNSTLVFDVELLKV  112 (113)
T ss_dssp             TTBCTTCCEEEEEEEEEE
T ss_pred             CccCcCCeEEEEEEEEEe
Confidence            789999999999999875

>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Mitochondria fission protein Fis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.66  E-value=0.53  Score=35.66  Aligned_cols=59  Identities=8%  Similarity=-0.071  Sum_probs=45.2

Q ss_pred             cchhHhHHhhhhccccccccCCCCC-hhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHh
Q psy5048         214 KTPSIHNCFLLSTKSMLTFARNQST-IPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQR  279 (319)
Q Consensus       214 ~~~a~~~c~~vl~~~~l~~~~~~~N-vKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k  279 (319)
                      ...+|.....++..+|       .+ --+||=-|..+..+++|+        +|+++|+|+.+....+.+.+++.
T Consensus        54 ~~~gI~lLe~~~~~~p-------~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~~Ie~~~~  121 (124)
T d2pqrb1          54 ERLGVKILTDIYKEAE-------SRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQ  121 (124)
T ss_dssp             HHHHHHHHHHHHHHCG-------GGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCc-------hhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHh
Confidence            3456777777777666       55 368888888777788887        99999999999888777776654

>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.58  E-value=1.2  Score=35.32  Aligned_cols=67  Identities=4%  Similarity=-0.173  Sum_probs=52.1

Q ss_pred             HHhcccchhHhHHhhhhccccccccCCCCChhHHHHHHHHHHhcCccc--------cccCCCChhhHHHHHHHHHHHHhH
Q psy5048         209 ALLVKKTPSIHNCFLLSTKSMLTFARNQSTIPAWTHDYTRLALLLPFL--------QYEFPPEQSQCLPLLGIRAQHQRG  280 (319)
Q Consensus       209 ~~~~~~~~a~~~c~~vl~~~~l~~~~~~~NvKALfRrg~~~~~~~~~~--------a~~~dP~n~~i~~el~~l~~~~k~  280 (319)
                      .....|..|+..-+.+   .+       .|.+++|-+|..+..+++++        |+++||++..+...+..+-.++..
T Consensus        16 ~~~~d~~~Al~~~~~i---~~-------~~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~~~~~~g~   85 (192)
T d1hh8a_          16 ADKKDWKGALDAFSAV---QD-------PHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEK   85 (192)
T ss_dssp             HHTTCHHHHHHHHHTS---SS-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred             HHCCCHHHHHHHHHhc---CC-------CCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHHHHHhhcc
Confidence            4456777787776654   33       68999999999777788886        999999999999988888766665


Q ss_pred             hHHHH
Q psy5048         281 HMITQ  285 (319)
Q Consensus       281 ~~~ke  285 (319)
                      +.+-.
T Consensus        86 ~~~A~   90 (192)
T d1hh8a_          86 YDLAI   90 (192)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55443