Psyllid ID: psy5222
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 415 | 2.2.26 [Sep-21-2011] | |||||||
| P40804 | 415 | Polyketide biosynthesis m | yes | N/A | 0.934 | 0.934 | 0.340 | 7e-71 | |
| Q83E37 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | N/A | 0.956 | 0.958 | 0.284 | 3e-47 | |
| P55338 | 415 | 3-oxoacyl-[acyl-carrier-p | yes | N/A | 0.954 | 0.954 | 0.271 | 7e-35 | |
| Q9KQH9 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | N/A | 0.944 | 0.946 | 0.275 | 3e-34 | |
| P0AAI8 | 413 | 3-oxoacyl-[acyl-carrier-p | yes | N/A | 0.949 | 0.953 | 0.270 | 3e-34 | |
| P0AAI5 | 413 | 3-oxoacyl-[acyl-carrier-p | N/A | N/A | 0.949 | 0.953 | 0.270 | 3e-34 | |
| P0AAI6 | 413 | 3-oxoacyl-[acyl-carrier-p | yes | N/A | 0.949 | 0.953 | 0.270 | 3e-34 | |
| P0AAI7 | 413 | 3-oxoacyl-[acyl-carrier-p | N/A | N/A | 0.949 | 0.953 | 0.270 | 3e-34 | |
| O34340 | 413 | 3-oxoacyl-[acyl-carrier-p | no | N/A | 0.939 | 0.944 | 0.266 | 3e-34 | |
| P73283 | 416 | 3-oxoacyl-[acyl-carrier-p | N/A | N/A | 0.934 | 0.932 | 0.264 | 3e-33 |
| >sp|P40804|PKSF_BACSU Polyketide biosynthesis malonyl-ACP decarboxylase PksF OS=Bacillus subtilis (strain 168) GN=pksF PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 268 bits (684), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 234/408 (57%), Gaps = 20/408 (4%)
Query: 5 SSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKK 64
+SIG F++SL+ G+ D + + S+ I A+I + ++ + L+K
Sbjct: 18 ASIGQGKEDFASSLLSGRHAFDVMKRSGRQKDSRFIGAEIASLSYPDRLSK--------- 68
Query: 65 EFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLY 124
+ +K+ + +++ +AW ++L RIGL++ G N Q + +Y
Sbjct: 69 ----KMLRKASFSSRAALVTLTEAWEEAELDDAD----SSRIGLVVGGSNFQQRENFEVY 120
Query: 125 PEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIHGMRLIQN 184
+ + ++SP Y + FMDS+ GI ++ F I G + +GGASASG + +IH ++ + +
Sbjct: 121 ERYQDRSGFISPAYGLSFMDSDLCGICTDQFGITGLAYTVGGASASGQLAVIHAIQQVLS 180
Query: 185 NIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYGQASAA 244
VD C+ + A+ DLS ME +A A+GAMG + + P+ CRPFD+ +GFIYG++ A
Sbjct: 181 GEVDTCIALGALMDLSYMECEALRALGAMGTDKYADEPENACRPFDQNRDGFIYGESCGA 240
Query: 245 LLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDY 304
L+IE + A L G I L +P+P+L EI V+ L+++ L IDY
Sbjct: 241 LVIERKETALRRGLKPYAALSGWSIKLDGNRNPDPSLEGEIHVIQKALERARLLPEDIDY 300
Query: 305 LNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRK 364
+N HG+ S +GD+IE+ A++ +H +N+TKS+TGH L ++GIVEII+ ++QM+K
Sbjct: 301 INPHGTGSFIGDEIELKALRACRLSH---AYINATKSITGHGLSAAGIVEIISVLLQMKK 357
Query: 365 KFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIIL 412
+HP+ NL+ PID+ ++ +KSIS I N +S S GF G+N+++ +
Sbjct: 358 SALHPSRNLDHPIDDSFHWVNEKSISYRIKNALSLSMGFGGMNTAVCI 405
|
Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism. It decarboxylates selectively the malonyl group attached on the acyl-carrier-protein AcpK (Mal-AcpK). Bacillus subtilis (strain 168) (taxid: 224308) EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 8EC: 7 |
| >sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 216/418 (51%), Gaps = 21/418 (5%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+G+VS +G ++ +L+ GKSG+ S+F I A++ +F+ L+
Sbjct: 11 LGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPALVLD------ 64
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQ 120
L +K+ +F+Q ++ +A QAW +S L + R+G+ I +
Sbjct: 65 -------LKSIRKTDVFVQFAMESARQAWEDSGLEINETNA--PRVGVAIGSGIGGMPWI 115
Query: 121 YSLYPEFLKK-PEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIHGM 179
Y L P +SP + + + G++S ++++G I A +G I H
Sbjct: 116 EKNYDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAA 175
Query: 180 RLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239
R+I +N DA + +P+ I F A+ A+ +N + P+K RP+DK +GF+ G
Sbjct: 176 RMIAHNDADAMIAGGTEMASTPLGIGGFAAVRALSTRN--DEPEKASRPWDKGRDGFVLG 233
Query: 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHA--TASPEPNLNNEISVMNSVLKQSGL 297
+ +A +++E ++ K N + A ++G ++ A P+P + M + L+ +G+
Sbjct: 234 EGAACVVVEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNSLRDAGI 293
Query: 298 KKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIA 357
+DY+N HG+S+P D +E AIK+ + +H KL ++STKS+TGH L ++G +E +
Sbjct: 294 APERVDYINAHGTSTPAADPLEARAIKKTFGDHAYKLAVSSTKSMTGHMLGAAGALETVI 353
Query: 358 SVIQMRKKFIHPNLNLESPIDN-QANFSGKKSISININNVMSNSFGFSGINSSIILCK 414
SV+ +R P +NLE+P + +F ++ + I+ VMSNSFGF G N +++L +
Sbjct: 354 SVLAIRDNTAPPTINLENPDEGCDLDFVPNEAREMKIDTVMSNSFGFGGTNGTLVLSR 411
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Coxiella burnetii (strain RSA 493 / Nine Mile phase I) (taxid: 227377) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2 | Back alignment and function description |
|---|
Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 201/420 (47%), Gaps = 24/420 (5%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
MG++S +G + S +L++G+SGI + +NFS + +F+ T+
Sbjct: 11 MGMLSPVGNTVESSWKALLEGQSGIVNIEHFDATNFSTRFAGLVKDFD-------CTEYM 63
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLH--KKKYKILPERIGLIIAGHNTTQN 118
KK A+K LFIQ I A +QA +S L ++ + IG I G + +
Sbjct: 64 SKKD------ARKMDLFIQYGIAAGIQALDDSGLEITEENAARVGVAIGSGIGGLDLIEA 117
Query: 119 YQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIHG 178
+L K P +SP + + + G +S + +RG I A +G I H
Sbjct: 118 GHSALVE---KGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAISTACTTGLHNIGHA 174
Query: 179 MRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIY 238
R+I +A + A +P+ + F A A+ +N + P+K RP+DK +GF+
Sbjct: 175 ARMIAYGDAEAMVAGGAEKASTPLGMAGFGAAKALSTRN--DEPQKASRPWDKGRDGFVL 232
Query: 239 GQASAALLIEGNKNIKILNKSYLARLLGGVINLHA--TASPEPNLNNEISVMNSVLKQSG 296
G + +++E ++ K A L+G ++ A SP + + M + ++ +
Sbjct: 233 GDGAGVMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAN 292
Query: 297 LKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSK-LLLNSTKSLTGHCLYSSGIVEI 355
+ + Y+N HG+S+P GD EI +K SK +L++STKS+TGH L ++G VE
Sbjct: 293 ITGTQVGYVNAHGTSTPAGDVAEIKGVKRALGEEGSKQVLVSSTKSMTGHLLGAAGSVEA 352
Query: 356 IASVIQMRKKFIHPNLNLESPIDN-QANFSGKKSISININNVMSNSFGFSGINSSIILCK 414
I +V+ + + + P +NL+ P + + + +++ + NSFGF G N S++ K
Sbjct: 353 IITVLSLVDQIVPPTINLDDPEEGLDIDLVPHTARKVDMEYAICNSFGFGGTNGSLVFKK 412
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio harveyi (taxid: 669) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabF PE=3 SV=3 | Back alignment and function description |
|---|
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 200/421 (47%), Gaps = 29/421 (6%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
MG++S +G + S +L+ G+SGI + +NFS + F+ + ++K
Sbjct: 11 MGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQYMSK----- 65
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLII-AGHNTTQNY 119
A+K LFIQ I A +QA +S L + RIG+ I +G +
Sbjct: 66 --------KDARKMDLFIQYGIAAGIQALEDSGLEVNEEN--AARIGVAIGSGIGGLELI 115
Query: 120 QYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIHGM 179
+ K P +SP + + + G +S + +RG I A +G I H
Sbjct: 116 ETGHQALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAA 175
Query: 180 RLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239
R+I DA + A +P+ + F A A+ +N + P+K RP+DK +GF+ G
Sbjct: 176 RMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRN--DEPQKASRPWDKDRDGFVLG 233
Query: 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHA--TASPEPNLNNEISVMNSVLKQSGL 297
+ +++E ++ K A ++G ++ A SP + + M + ++ +G+
Sbjct: 234 DGAGIMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGV 293
Query: 298 KKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSK-LLLNSTKSLTGHCLYSSGIVEII 356
I Y+N HG+S+P GD E+ IK +K +L++STKS+TGH L ++G VE I
Sbjct: 294 TGEQIGYVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAI 353
Query: 357 ASVIQMRKKFIHPNLNLESP-----IDNQANFSGKKSISININNVMSNSFGFSGINSSII 411
+V+ + + + P +NL++P +D + + K ++ M NSFGF G N S+I
Sbjct: 354 ITVMSLVDQMVPPTINLDNPEEGLGVDLVPHVARKVE---SMEYAMCNSFGFGGTNGSLI 410
Query: 412 L 412
Sbjct: 411 F 411
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P0AAI8|FABF_SHIFL 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shigella flexneri GN=fabF PE=3 SV=2 | Back alignment and function description |
|---|
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 207/422 (49%), Gaps = 28/422 (6%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+G++S +G + S +L+ G+SGI + S ++ + +FN + D+
Sbjct: 11 LGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE-------DII 63
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLH---KKKYKILPERIGLIIAGHNTTQ 117
+K++ +K FIQ I+A +QA +S L + +I I +
Sbjct: 64 SRKEQ------RKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEE 117
Query: 118 NYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIH 177
N+ + P +SP + + + G ++ ++ +RG I A SG I H
Sbjct: 118 NHTSLMN----GGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGH 173
Query: 178 GMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFI 237
R+I D + A +P+ + F A A+ +N + P+ RP+DK +GF+
Sbjct: 174 AARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRN--DNPQAASRPWDKERDGFV 231
Query: 238 YGQASAALLIEGNKNIKILNKSYLARLLGGVIN---LHATASPEPNLNNEISVMNSVLKQ 294
G + L++E ++ K A L+G ++ H T+ PE N M + L+
Sbjct: 232 LGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPE-NGAGAALAMANALRD 290
Query: 295 SGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVE 354
+G++ + I Y+N HG+S+P GDK E A+K ++ S++L++STKS+TGH L ++G VE
Sbjct: 291 AGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVE 350
Query: 355 IIASVIQMRKKFIHPNLNLESPIDN-QANFSGKKSISIN-INNVMSNSFGFSGINSSIIL 412
I S++ +R + + P +NL++P + +F ++ ++ + + NSFGF G N S+I
Sbjct: 351 SIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 410
Query: 413 CK 414
K
Sbjct: 411 KK 412
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Shigella flexneri (taxid: 623) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P0AAI5|FABF_ECOLI 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli (strain K12) GN=fabF PE=1 SV=2 | Back alignment and function description |
|---|
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 207/422 (49%), Gaps = 28/422 (6%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+G++S +G + S +L+ G+SGI + S ++ + +FN + D+
Sbjct: 11 LGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE-------DII 63
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLH---KKKYKILPERIGLIIAGHNTTQ 117
+K++ +K FIQ I+A +QA +S L + +I I +
Sbjct: 64 SRKEQ------RKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEE 117
Query: 118 NYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIH 177
N+ + P +SP + + + G ++ ++ +RG I A SG I H
Sbjct: 118 NHTSLMN----GGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGH 173
Query: 178 GMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFI 237
R+I D + A +P+ + F A A+ +N + P+ RP+DK +GF+
Sbjct: 174 AARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRN--DNPQAASRPWDKERDGFV 231
Query: 238 YGQASAALLIEGNKNIKILNKSYLARLLGGVIN---LHATASPEPNLNNEISVMNSVLKQ 294
G + L++E ++ K A L+G ++ H T+ PE N M + L+
Sbjct: 232 LGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPE-NGAGAALAMANALRD 290
Query: 295 SGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVE 354
+G++ + I Y+N HG+S+P GDK E A+K ++ S++L++STKS+TGH L ++G VE
Sbjct: 291 AGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVE 350
Query: 355 IIASVIQMRKKFIHPNLNLESPIDN-QANFSGKKSISIN-INNVMSNSFGFSGINSSIIL 412
I S++ +R + + P +NL++P + +F ++ ++ + + NSFGF G N S+I
Sbjct: 351 SIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 410
Query: 413 CK 414
K
Sbjct: 411 KK 412
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Escherichia coli (strain K12) (taxid: 83333) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P0AAI6|FABF_ECOL6 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabF PE=3 SV=2 | Back alignment and function description |
|---|
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 207/422 (49%), Gaps = 28/422 (6%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+G++S +G + S +L+ G+SGI + S ++ + +FN + D+
Sbjct: 11 LGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE-------DII 63
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLH---KKKYKILPERIGLIIAGHNTTQ 117
+K++ +K FIQ I+A +QA +S L + +I I +
Sbjct: 64 SRKEQ------RKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEE 117
Query: 118 NYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIH 177
N+ + P +SP + + + G ++ ++ +RG I A SG I H
Sbjct: 118 NHTSLMN----GGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGH 173
Query: 178 GMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFI 237
R+I D + A +P+ + F A A+ +N + P+ RP+DK +GF+
Sbjct: 174 AARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRN--DNPQAASRPWDKERDGFV 231
Query: 238 YGQASAALLIEGNKNIKILNKSYLARLLGGVIN---LHATASPEPNLNNEISVMNSVLKQ 294
G + L++E ++ K A L+G ++ H T+ PE N M + L+
Sbjct: 232 LGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPE-NGAGAALAMANALRD 290
Query: 295 SGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVE 354
+G++ + I Y+N HG+S+P GDK E A+K ++ S++L++STKS+TGH L ++G VE
Sbjct: 291 AGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVE 350
Query: 355 IIASVIQMRKKFIHPNLNLESPIDN-QANFSGKKSISIN-INNVMSNSFGFSGINSSIIL 412
I S++ +R + + P +NL++P + +F ++ ++ + + NSFGF G N S+I
Sbjct: 351 SIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 410
Query: 413 CK 414
K
Sbjct: 411 KK 412
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P0AAI7|FABF_ECO57 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O157:H7 GN=fabF PE=3 SV=2 | Back alignment and function description |
|---|
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 207/422 (49%), Gaps = 28/422 (6%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+G++S +G + S +L+ G+SGI + S ++ + +FN + D+
Sbjct: 11 LGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE-------DII 63
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLH---KKKYKILPERIGLIIAGHNTTQ 117
+K++ +K FIQ I+A +QA +S L + +I I +
Sbjct: 64 SRKEQ------RKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEE 117
Query: 118 NYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIH 177
N+ + P +SP + + + G ++ ++ +RG I A SG I H
Sbjct: 118 NHTSLMN----GGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGH 173
Query: 178 GMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFI 237
R+I D + A +P+ + F A A+ +N + P+ RP+DK +GF+
Sbjct: 174 AARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRN--DNPQAASRPWDKERDGFV 231
Query: 238 YGQASAALLIEGNKNIKILNKSYLARLLGGVIN---LHATASPEPNLNNEISVMNSVLKQ 294
G + L++E ++ K A L+G ++ H T+ PE N M + L+
Sbjct: 232 LGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPE-NGAGAALAMANALRD 290
Query: 295 SGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVE 354
+G++ + I Y+N HG+S+P GDK E A+K ++ S++L++STKS+TGH L ++G VE
Sbjct: 291 AGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVE 350
Query: 355 IIASVIQMRKKFIHPNLNLESPIDN-QANFSGKKSISIN-INNVMSNSFGFSGINSSIIL 412
I S++ +R + + P +NL++P + +F ++ ++ + + NSFGF G N S+I
Sbjct: 351 SIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 410
Query: 413 CK 414
K
Sbjct: 411 KK 412
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Escherichia coli O157:H7 (taxid: 83334) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis (strain 168) GN=fabF PE=3 SV=1 | Back alignment and function description |
|---|
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 208/424 (49%), Gaps = 34/424 (8%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+G +S +G D+ + N+ I G SGI + + A++ +FN ++ ++K
Sbjct: 11 LGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKVAAELKDFNVEDYMDK----- 65
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA---GHNTTQ 117
KE A+K F Q +++AA A ++ L+ +I P R+G+ + G T
Sbjct: 66 ---KE-----ARKMDRFTQYAVVAAKMAVEDADLNITD-EIAP-RVGVWVGSGIGGLETL 115
Query: 118 NYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIH 177
Q+ ++ K P +SP + + G +S +G A A+G I
Sbjct: 116 ESQFEIF--LTKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGD 173
Query: 178 GMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFI 237
++IQ DA ++++ T+ +P+ +F A + PK RPFDK +GF+
Sbjct: 174 AFKVIQRG--DADVMVTGGTE-APLTRMSFAGFSANKALSTNPDPKTASRPFDKNRDGFV 230
Query: 238 YGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATA------SPEPNLNNEISVMNSV 291
G+ + +++E ++ L + A++ G ++ +T +P + M
Sbjct: 231 MGEGAGIIVLEELEHA--LARG--AKIYGEIVGYGSTGDAYHITAPAQDGEGGARAMQEA 286
Query: 292 LKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSG 351
+K +G+ IDY+N HG+S+ DK E AIK V+ H KL ++STKS+TGH L ++G
Sbjct: 287 IKDAGIAPEEIDYINAHGTSTYYNDKYETMAIKTVFGEHAHKLAVSSTKSMTGHLLGAAG 346
Query: 352 IVEIIASVIQMRKKFIHPNLNLESPIDN-QANFSGKKSISININNVMSNSFGFSGINSSI 410
+E I S++ +++ I P +N+++P + ++ ++ +N V+SNS GF G N+++
Sbjct: 347 GIEAIFSILAIKEGVIPPTINIQTPDEECDLDYVPDEARRQELNYVLSNSLGFGGHNATL 406
Query: 411 ILCK 414
I K
Sbjct: 407 IFKK 410
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Bacillus subtilis (strain 168) (taxid: 224308) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P73283|FABF_SYNY3 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 198/419 (47%), Gaps = 31/419 (7%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+G ++ IG + + L++G++GI S+ + ++ +F+ L++
Sbjct: 14 LGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDR----- 68
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKL-----HKKKYKILPERIGLIIAGHNT 115
KE A++ F ++ A+ QA ++KL + + +L IG I G
Sbjct: 69 ---KE-----AKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVL---IGTGIGGLKV 117
Query: 116 TQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEI-FNIRGEGFIIGGASASGNIG 174
++ Q L K P SP + I M +N ++ I +G A A+G+
Sbjct: 118 LEDQQTIL---LDKGPSRCSP-FMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNA 173
Query: 175 IIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAE 234
I RL+QN A + ++P+ F + A+ +N + P RPFDK +
Sbjct: 174 IGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRN--DDPLHASRPFDKDRD 231
Query: 235 GFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHA--TASPEPNLNNEISVMNSVL 292
GF+ G+ S L++E ++ ++G + A +P P+ + L
Sbjct: 232 GFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWAL 291
Query: 293 KQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGI 352
K SGLK M+ Y+N HG+S+P D E AIK+ NH + ++STKS+TGH L SG
Sbjct: 292 KDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGG 351
Query: 353 VEIIASVIQMRKKFIHPNLNLESP-IDNQANFSGKKSISININNVMSNSFGFSGINSSI 410
+E +A+V+ + + + P +NLE+P + ++ +S ++ ++ +SNSFGF G N ++
Sbjct: 352 IEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTL 410
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates. Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 415 | ||||||
| TIGR_CMR|CBU_0497 | 414 | CBU_0497 "3-oxoacyl-acyl carri | 0.857 | 0.859 | 0.246 | 1.7e-27 | |
| TIGR_CMR|CHY_1445 | 412 | CHY_1445 "3-oxoacyl-(acyl-carr | 0.855 | 0.861 | 0.268 | 2.2e-27 | |
| TIGR_CMR|ECH_0882 | 422 | ECH_0882 "3-oxoacyl-(acyl-carr | 0.901 | 0.886 | 0.263 | 4.9e-25 | |
| GENEDB_PFALCIPARUM|PFF1275c | 473 | FabB/FabF "3-oxoacyl-(acyl-car | 0.893 | 0.784 | 0.243 | 6.2e-25 | |
| UNIPROTKB|C6KT99 | 473 | FabB/FabF "3-oxoacyl-acyl-carr | 0.893 | 0.784 | 0.243 | 6.2e-25 | |
| UNIPROTKB|Q5HW22 | 404 | fabF "3-oxoacyl-[acyl-carrier- | 0.703 | 0.722 | 0.254 | 1.4e-24 | |
| TIGR_CMR|CJE_0494 | 404 | CJE_0494 "3-oxoacyl-(acyl-carr | 0.703 | 0.722 | 0.254 | 1.4e-24 | |
| UNIPROTKB|P0AAI5 | 413 | fabF "FabF" [Escherichia coli | 0.860 | 0.864 | 0.236 | 2e-24 | |
| UNIPROTKB|E1BYY7 | 461 | OXSM "3-oxoacyl-[acyl-carrier- | 0.445 | 0.401 | 0.317 | 3.3e-24 | |
| TIGR_CMR|APH_0930 | 423 | APH_0930 "3-oxoacyl-(acyl-carr | 0.893 | 0.877 | 0.246 | 4.6e-24 |
| TIGR_CMR|CBU_0497 CBU_0497 "3-oxoacyl-acyl carrier protein synthase II" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 94/382 (24%), Positives = 174/382 (45%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQXXXXXXXXXXXXXXXXXXXLNKITDLS 60
+G+VS +G ++ +L+ GKSG+ I + DL
Sbjct: 11 LGVVSPLGNKVSDMWQALLAGKSGVK-PITRFDASSFPTQIAAEVRDFDPAL---VLDLK 66
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQ 120
+K+ +F+Q ++ +A QAW +S L + P R+G+ I +
Sbjct: 67 S---------IRKTDVFVQFAMESARQAWEDSGLEINETNA-P-RVGVAIGSGIGGMPWI 115
Query: 121 YSLYPEFLKK-PEYLSPRYAIQFMDSNQIGIMSEIFNIRXXXXXXXXXXXXXXXXXXXXM 179
Y L P +SP + + + G++S ++++
Sbjct: 116 EKNYDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAA 175
Query: 180 RLIQNNIVDACLIISAMTDLS--PMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFI 237
R+I +N DA +I+ T+++ P+ I F A+ A+ +N + P+K RP+DK +GF+
Sbjct: 176 RMIAHNDADA--MIAGGTEMASTPLGIGGFAAVRALSTRN--DEPEKASRPWDKGRDGFV 231
Query: 238 YGQASAALLIEGNKNIKILNKSYLARLLG-GVIN--LHATASPEPNLNNEISVMNSVLKQ 294
G+ +A +++E ++ K N + A ++G G+ H T P+P + M + L+
Sbjct: 232 LGEGAACVVVEELEHAKKRNATIYAEIIGFGMSGDAYHMTR-PDPEAEGFTTCMKNSLRD 290
Query: 295 SGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFXXXXXXXXXXXXGHCLYSSGIVE 354
+G+ +DY+N HG+S+P D +E AIK+ + +H GH L ++G +E
Sbjct: 291 AGIAPERVDYINAHGTSTPAADPLEARAIKKTFGDHAYKLAVSSTKSMTGHMLGAAGALE 350
Query: 355 IIASVIQMRKKFIHPNLNLESP 376
+ SV+ +R P +NLE+P
Sbjct: 351 TVISVLAIRDNTAPPTINLENP 372
|
|
| TIGR_CMR|CHY_1445 CHY_1445 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 103/383 (26%), Positives = 167/383 (43%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQXXXXXXXXXXXXXXXXXXXLNKITDLS 60
+G++S +G I ++L+KG SG+ E+++ K D
Sbjct: 9 LGLISPLGIGIKENWDNLMKGVSGVR-EVSSFDTTGFATRIAAEVRDFDPL---KFID-- 62
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA---GHNTTQ 117
KKE A++ F Q ++ A A ++ L K I PER G+ I G T
Sbjct: 63 --KKE-----ARRMDRFTQFAVAATKLAIEDAGLELSK--INPERAGIFIGSGIGGIKTL 113
Query: 118 NYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEI-FNIRXXXXXXXXXXXXXXXXXX 176
Q ++ E K P+ +SP + + M +N G I F +
Sbjct: 114 EEQAAILRE--KGPDRVSP-FFVPMMIANMAGGQIAITFGLTGPNETIVSACASGANAVG 170
Query: 177 XXMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGF 236
R +Q VD + A ++P+ F ++ AM +N + P+K RPFDK +GF
Sbjct: 171 DAFRCLQRGEVDVAIAGGAEAAITPLSFAGFCSMKAMSTRN--DEPEKASRPFDKDRDGF 228
Query: 237 IYGQASAALLIEGNKNIKILNKSYLARLLG-GVIN--LHATASPEPNLNNEISVMNSVLK 293
+ G+ + L++E ++ ++G GV + H TA P+P M LK
Sbjct: 229 VMGEGAGILILETLEHALARGARIYGEIVGYGVTSDAYHITA-PDPEGKGAARAMELALK 287
Query: 294 QSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFXXXXXXXXXXXXGHCLYSSGIV 353
+ L IDY+N HG+S+PL DK+E AIK+V+ +H GH L ++G +
Sbjct: 288 DARLNPEDIDYINAHGTSTPLNDKVETLAIKKVFGDHAYKLMVSSTKSMTGHLLGAAGGI 347
Query: 354 EIIASVIQMRKKFIHPNLNLESP 376
E I S++ + + P LN + P
Sbjct: 348 ETIYSILAVFFNQVPPTLNCDEP 370
|
|
| TIGR_CMR|ECH_0882 ECH_0882 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] | Back alignment and assigned GO terms |
|---|
Score = 285 (105.4 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 102/387 (26%), Positives = 167/387 (43%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQXXXXXXXXXXXXXXXXXXXLNKITDLS 60
+G+V+S+G D+ + +SL KG SGI +I+ I D
Sbjct: 11 LGLVTSLGSDLKTVWDSLSKGISGIR-KIDRFDTSDLDCKVAGQVTTKPESE-EYIFDAG 68
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILP-ERIGLII-AGHNTTQN 118
+ E L +K FI I +A QA +S L YK L R+G+I+ +G Q
Sbjct: 69 DYIPEKDL---KKMDTFIHFGIASATQAINDSNL--LDYKDLDYSRVGVIVGSGIGGLQF 123
Query: 119 YQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRXXXXXXXXXXXXXXXXXXXX 178
+ ++ + P+ +SP + + + G +S +
Sbjct: 124 IEKTVICLKERGPKRISPFFIPASLINLTSGHISMKYGFTGLNDAVVTACSTGAQAIGNA 183
Query: 179 MRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIY 238
R+IQ+ D + + + + I F A+ A+ K F + P+ RP+DK +GF+
Sbjct: 184 ARVIQSGEADVIIAGGTESAICRIGIAGFAAMKALSTK-FNDTPELASRPWDKQRDGFVM 242
Query: 239 GQASAALLIEGNKNIKILNKSYLARLLG-GVIN-LHATASPEPNLNNEISVMNSVLKQSG 296
G+ S +++E ++ K LLG G+ + + ++P P I + L +
Sbjct: 243 GEGSGVVILEDYEHAKKRGARIYGELLGYGMTSDAYHMSAPHPEGKGGIKSIELALSNAQ 302
Query: 297 LKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFXXXXXXXXXXXXGHCLYSSGIVEII 356
L I+Y+N HG+S+P+GD IEI AIK V+K GH L ++G VE I
Sbjct: 303 LNPESINYINAHGTSTPIGDSIEIQAIKNVFKESVYKVPISSTKSSIGHLLGAAGSVEAI 362
Query: 357 ASVIQMRKKFIHPNLNL-ESPIDNQAN 382
++ M P LNL ES D + N
Sbjct: 363 FCILAMNTGIAPPTLNLHESSEDPKLN 389
|
|
| GENEDB_PFALCIPARUM|PFF1275c FabB/FabF "3-oxoacyl-(acyl-carrier-protein) synthase i/ii" [Plasmodium falciparum (taxid:5833)] | Back alignment and assigned GO terms |
|---|
Score = 271 (100.5 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 96/394 (24%), Positives = 161/394 (40%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQXXXXXXXXXXXXXXXXXXXLNKITDLS 60
+G+V+ +G I F N++I G + ID +I + T+
Sbjct: 64 VGVVTGLGIGIEHFWNNIINGYTSID-KITKFDITGMSCGIGSEIKKSDFNPSDYYTNKK 122
Query: 61 E-KKKEFILHIAQKSPLFIQTSIIAALQAWYN-SKLHKKKYKILPERIGLIIAGHNTTQN 118
+ + + H A + + +A A N KL K K + IG I G +
Sbjct: 123 DVNRNDDCTHYA------VAATRLALDDAKLNLEKLDKDKTGTI---IGSGIGGLRFLEK 173
Query: 119 YQYSLYPEFLKKPEYLSPRYAIQFMDSNQ-IGIMSEIFNIRXXXXXXXXXXXXXXXXXXX 177
++Y + K+ ++P Y I M +N G +S NIR
Sbjct: 174 EMKTMYEKGHKR---ITP-YLIPAMIANTPSGYVSIENNIRGISLGMLSACATSGNTIGE 229
Query: 178 XMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFI 237
R I+ D + ++P+ F+++ A+ + + PKK CRPFD GF+
Sbjct: 230 AYRYIKYKEYDVMICGGTEASITPISFAGFNSLKALC-TGYNDNPKKGCRPFDLKRSGFV 288
Query: 238 YGQASAALLIEGNKNIKILNKSYLARLLGGVINL---HATASPEPNLNNEISVMNSVLKQ 294
G+ S L++E ++ N ++ H TA PEPN + ++ LK
Sbjct: 289 MGEGSGILILESYEHAIKRNAPIYGEIISYSSECDAYHITA-PEPNGKGLTNSIHKALKN 347
Query: 295 SGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFXXXXXXXXXXXXGHCLYSSGIVE 354
+ + N + Y+N HG+S+ L DKIE K V+K+H GHC+ ++G +E
Sbjct: 348 ANININDVKYINAHGTSTNLNDKIETKVFKNVFKDHAYKLYISSTKSMTGHCIGAAGAIE 407
Query: 355 IIASVIQMRKKFIHPNLNLE-SPIDNQANFSGKK 387
I + M+ I P +N E D N++ K
Sbjct: 408 SIVCLKTMQTNIIPPTINYEYKDPDCDLNYTPNK 441
|
|
| UNIPROTKB|C6KT99 FabB/FabF "3-oxoacyl-acyl-carrier protein synthase I/II" [Plasmodium falciparum 3D7 (taxid:36329)] | Back alignment and assigned GO terms |
|---|
Score = 271 (100.5 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 96/394 (24%), Positives = 161/394 (40%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQXXXXXXXXXXXXXXXXXXXLNKITDLS 60
+G+V+ +G I F N++I G + ID +I + T+
Sbjct: 64 VGVVTGLGIGIEHFWNNIINGYTSID-KITKFDITGMSCGIGSEIKKSDFNPSDYYTNKK 122
Query: 61 E-KKKEFILHIAQKSPLFIQTSIIAALQAWYN-SKLHKKKYKILPERIGLIIAGHNTTQN 118
+ + + H A + + +A A N KL K K + IG I G +
Sbjct: 123 DVNRNDDCTHYA------VAATRLALDDAKLNLEKLDKDKTGTI---IGSGIGGLRFLEK 173
Query: 119 YQYSLYPEFLKKPEYLSPRYAIQFMDSNQ-IGIMSEIFNIRXXXXXXXXXXXXXXXXXXX 177
++Y + K+ ++P Y I M +N G +S NIR
Sbjct: 174 EMKTMYEKGHKR---ITP-YLIPAMIANTPSGYVSIENNIRGISLGMLSACATSGNTIGE 229
Query: 178 XMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFI 237
R I+ D + ++P+ F+++ A+ + + PKK CRPFD GF+
Sbjct: 230 AYRYIKYKEYDVMICGGTEASITPISFAGFNSLKALC-TGYNDNPKKGCRPFDLKRSGFV 288
Query: 238 YGQASAALLIEGNKNIKILNKSYLARLLGGVINL---HATASPEPNLNNEISVMNSVLKQ 294
G+ S L++E ++ N ++ H TA PEPN + ++ LK
Sbjct: 289 MGEGSGILILESYEHAIKRNAPIYGEIISYSSECDAYHITA-PEPNGKGLTNSIHKALKN 347
Query: 295 SGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFXXXXXXXXXXXXGHCLYSSGIVE 354
+ + N + Y+N HG+S+ L DKIE K V+K+H GHC+ ++G +E
Sbjct: 348 ANININDVKYINAHGTSTNLNDKIETKVFKNVFKDHAYKLYISSTKSMTGHCIGAAGAIE 407
Query: 355 IIASVIQMRKKFIHPNLNLE-SPIDNQANFSGKK 387
I + M+ I P +N E D N++ K
Sbjct: 408 SIVCLKTMQTNIIPPTINYEYKDPDCDLNYTPNK 441
|
|
| UNIPROTKB|Q5HW22 fabF "3-oxoacyl-[acyl-carrier-protein] synthase 2" [Campylobacter jejuni RM1221 (taxid:195099)] | Back alignment and assigned GO terms |
|---|
Score = 254 (94.5 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 77/302 (25%), Positives = 134/302 (44%)
Query: 72 QKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA-GHNTTQNYQYSLYPEFLKK 130
+K FIQ I AA +A ++ ++ K E G++ A G N + + +
Sbjct: 67 KKIDRFIQLGIKAAREAMQDAGFSEELDK---EEFGIVSASGIGGLPNIEKNSIICSERG 123
Query: 131 PEYLSPRYAIQFMDSNQIGIMSEIFNIRXXXXXXXXXXXXXXXXXXXXMRLIQNNIVDAC 190
P +SP + + + G++S ++ + I
Sbjct: 124 PRKISPFFIPSALVNMLGGLISIEHGLKGPNISCVTACAAGTHAIGEAYKSIALGNAKKM 183
Query: 191 LIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYGQASAALLIEGN 250
L+I A + P+ I F ++ A+ +N P+ RPFDK +GF+ G+ + AL+ E
Sbjct: 184 LVIGAEAAICPVGIGGFASMKALSTRN--EDPEHASRPFDKERDGFVMGEGAGALVFEEY 241
Query: 251 KNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGS 310
+ K + A L+G + A P L+ + M L +G K +DY+N HG+
Sbjct: 242 EEAKKRGATIYAELIGFGESADAHHITSPTLDGPLRAMKKALNMAGNPK--VDYINAHGT 299
Query: 311 SSPLGDKIEISAIKEVYKNHFXXXXXXXXXXXXGHCLYSSGIVEIIASVIQMRKKFIHPN 370
S+P+ DK E +AIKE++ N+ GHCL ++G +E + SV+ +R + P
Sbjct: 300 STPVNDKNETAAIKELFGNNIPLISSTKGQT--GHCLGAAGAIEAVVSVMALRDGVVPPT 357
Query: 371 LN 372
+N
Sbjct: 358 IN 359
|
|
| TIGR_CMR|CJE_0494 CJE_0494 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Campylobacter jejuni RM1221 (taxid:195099)] | Back alignment and assigned GO terms |
|---|
Score = 254 (94.5 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 77/302 (25%), Positives = 134/302 (44%)
Query: 72 QKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA-GHNTTQNYQYSLYPEFLKK 130
+K FIQ I AA +A ++ ++ K E G++ A G N + + +
Sbjct: 67 KKIDRFIQLGIKAAREAMQDAGFSEELDK---EEFGIVSASGIGGLPNIEKNSIICSERG 123
Query: 131 PEYLSPRYAIQFMDSNQIGIMSEIFNIRXXXXXXXXXXXXXXXXXXXXMRLIQNNIVDAC 190
P +SP + + + G++S ++ + I
Sbjct: 124 PRKISPFFIPSALVNMLGGLISIEHGLKGPNISCVTACAAGTHAIGEAYKSIALGNAKKM 183
Query: 191 LIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYGQASAALLIEGN 250
L+I A + P+ I F ++ A+ +N P+ RPFDK +GF+ G+ + AL+ E
Sbjct: 184 LVIGAEAAICPVGIGGFASMKALSTRN--EDPEHASRPFDKERDGFVMGEGAGALVFEEY 241
Query: 251 KNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGS 310
+ K + A L+G + A P L+ + M L +G K +DY+N HG+
Sbjct: 242 EEAKKRGATIYAELIGFGESADAHHITSPTLDGPLRAMKKALNMAGNPK--VDYINAHGT 299
Query: 311 SSPLGDKIEISAIKEVYKNHFXXXXXXXXXXXXGHCLYSSGIVEIIASVIQMRKKFIHPN 370
S+P+ DK E +AIKE++ N+ GHCL ++G +E + SV+ +R + P
Sbjct: 300 STPVNDKNETAAIKELFGNNIPLISSTKGQT--GHCLGAAGAIEAVVSVMALRDGVVPPT 357
Query: 371 LN 372
+N
Sbjct: 358 IN 359
|
|
| UNIPROTKB|P0AAI5 fabF "FabF" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 90/381 (23%), Positives = 167/381 (43%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQXXXXXXXXXXXXXXXXXXXLNKITDLS 60
+G++S +G + S +L+ G+SGI I++ D+
Sbjct: 11 LGMLSPVGNTVESTWKALLAGQSGISL-IDHFDTSAYATKFAGLVKDF------NCEDII 63
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLH--KKKYKILPERIGLIIAGHNTTQN 118
+K++ +K FIQ I+A +QA +S L ++ + IG I G +
Sbjct: 64 SRKEQ------RKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEE 117
Query: 119 YQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRXXXXXXXXXXXXXXXXXXXX 178
SL P +SP + + + G ++ ++ +R
Sbjct: 118 NHTSLMNG---GPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHA 174
Query: 179 MRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIY 238
R+I D + A +P+ + F A A+ +N + P+ RP+DK +GF+
Sbjct: 175 ARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRN--DNPQAASRPWDKERDGFVL 232
Query: 239 GQASAALLIEGNKNIKILNKSYLARLLG-GVIN--LHATASPEPNLNNEISVMNSVLKQS 295
G + L++E ++ K A L+G G+ + H T+ PE +++ N+ L+ +
Sbjct: 233 GDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANA-LRDA 291
Query: 296 GLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFXXXXXXXXXXXXGHCLYSSGIVEI 355
G++ + I Y+N HG+S+P GDK E A+K ++ GH L ++G VE
Sbjct: 292 GIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVES 351
Query: 356 IASVIQMRKKFIHPNLNLESP 376
I S++ +R + + P +NL++P
Sbjct: 352 IYSILALRDQAVPPTINLDNP 372
|
|
| UNIPROTKB|E1BYY7 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 262 (97.3 bits), Expect = 3.3e-24, Sum P(2) = 3.3e-24
Identities = 61/192 (31%), Positives = 98/192 (51%)
Query: 188 DACLIISAMTD--LSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYGQASAAL 245
DA ++++ T+ +SP+ + F A+ F PKK CRPFD EGF+ G+ +A L
Sbjct: 227 DADVMLAGGTEACISPLSLAGFARARALS-TGFNASPKKACRPFDSQREGFVMGEGAAVL 285
Query: 246 LIEGNKNIKILNKSYLARLLG-GVIN--LHATASPEPNLNNEISVMNSVLKQSGLKKNMI 302
++E ++ A +LG G+ H TA P P + M++ +K SG+K +
Sbjct: 286 VLEEYRHAVQRGARIYAEVLGYGLSGDACHITA-PNPEGDGAFRCMSAAIKDSGIKPEDV 344
Query: 303 DYLNTHGSSSPLGDKIEISAIKEVYKNHFXXXXXXXXXXXXGHCLYSSGIVEIIASVIQM 362
Y+N H +S+PLGD E AIK+++K+H GH L ++G +E + +
Sbjct: 345 TYVNAHATSTPLGDAAENQAIKKLFKSHSHNIAVSSTKGATGHLLGAAGAIEAAFTALSC 404
Query: 363 RKKFIHPNLNLE 374
+ P LNLE
Sbjct: 405 YHAILPPTLNLE 416
|
|
| TIGR_CMR|APH_0930 APH_0930 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Anaplasma phagocytophilum HZ (taxid:212042)] | Back alignment and assigned GO terms |
|---|
Score = 277 (102.6 bits), Expect = 4.6e-24, P = 4.6e-24
Identities = 96/390 (24%), Positives = 169/390 (43%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINN---TQXXXXXXXXXXXXXXXXXXXLNKIT 57
MG+V+ +G I S + L+KG+SGI ++ + + T
Sbjct: 12 MGLVTPLGVAIPSVWDRLVKGESGIRQVVSRYDVSDLDCKIGGQVLLKGESDDYVFDPGT 71
Query: 58 DLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLII-AGHNTT 116
L EK+ +K LFI I A+ A +S + + PER G+++ +G
Sbjct: 72 WLEEKE-------VKKIDLFILFGIAASSIALEDSGALESNFD--PERFGVLLGSGIGGL 122
Query: 117 QNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRXXXXXXXXXXXXXXXXXX 176
N + ++ + P +SP + + + +S + ++
Sbjct: 123 PNIERNVTALNARGPRRISPFFVPGSLINLLPSHVSMRYGLKGYCNAVVGACATGAIAIT 182
Query: 177 XXMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGF 236
R+I++ + D + + + L I F I A+ K F + P+ RP+DK +GF
Sbjct: 183 EAARVIESGVCDIVVAGGSESALCRSGIAGFSIIKALSTK-FNDTPQVASRPWDKDRDGF 241
Query: 237 IYGQASAALLIEGNKNIKILNKSYLARLLG-GVIN--LHATASPEPNLNNEISVMNSVLK 293
+ G+ + +++E + K A L G G+ H TA P P + M L+
Sbjct: 242 VMGEGAGVVVLEDYEYAKKRGARIYAELTGYGLTADAYHITA-PHPQGEGGMRAMEMALR 300
Query: 294 QSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFXXXXXXXXXXXXGHCLYSSGIV 353
+ + + IDY+N HG+S+P GD +EI AIK ++++H GH L ++G V
Sbjct: 301 TANISPSEIDYINAHGTSTPTGDSVEIVAIKNLFQDHAYKVAISSTKSSIGHLLGAAGSV 360
Query: 354 EIIASVIQMRKKFIHPNLNLE-SPIDNQAN 382
E I S++ ++ + P LNL S D+ N
Sbjct: 361 EAIFSMLALQHGVLPPTLNLHNSTEDSNVN 390
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q83E37 | FABF_COXBU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.2846 | 0.9566 | 0.9589 | yes | N/A |
| P0AAI8 | FABF_SHIFL | 2, ., 3, ., 1, ., 1, 7, 9 | 0.2701 | 0.9493 | 0.9539 | yes | N/A |
| Q9NWU1 | OXSM_HUMAN | 2, ., 3, ., 1, ., 4, 1 | 0.2442 | 0.9301 | 0.8409 | yes | N/A |
| Q8NXE1 | FABF_STAAW | 2, ., 3, ., 1, ., 1, 7, 9 | 0.2595 | 0.9493 | 0.9516 | yes | N/A |
| P0AAI6 | FABF_ECOL6 | 2, ., 3, ., 1, ., 1, 7, 9 | 0.2701 | 0.9493 | 0.9539 | yes | N/A |
| P57193 | FABB_BUCAI | 2, ., 3, ., 1, ., 4, 1 | 0.3042 | 0.9325 | 0.9532 | yes | N/A |
| Q9KQH9 | FABF_VIBCH | 2, ., 3, ., 1, ., 1, 7, 9 | 0.2755 | 0.9445 | 0.9468 | yes | N/A |
| Q5TKS0 | FABF_STAAU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.2607 | 0.9445 | 0.9727 | yes | N/A |
| Q99VA6 | FABF_STAAM | 2, ., 3, ., 1, ., 1, 7, 9 | 0.2595 | 0.9493 | 0.9516 | yes | N/A |
| Q5HHA1 | FABF_STAAC | 2, ., 3, ., 1, ., 1, 7, 9 | 0.2595 | 0.9493 | 0.9516 | yes | N/A |
| P55338 | FABF_VIBHA | 2, ., 3, ., 1, ., 1, 7, 9 | 0.2714 | 0.9542 | 0.9542 | yes | N/A |
| P40804 | PKSF_BACSU | 4, ., 1, ., 1, ., 8, 7 | 0.3406 | 0.9349 | 0.9349 | yes | N/A |
| P39525 | CEM1_YEAST | 2, ., 3, ., 1, ., 4, 1 | 0.2438 | 0.9542 | 0.8959 | yes | N/A |
| Q0VCA7 | OXSM_BOVIN | 2, ., 3, ., 1, ., 4, 1 | 0.2313 | 0.9445 | 0.8521 | yes | N/A |
| Q7A6F8 | FABF_STAAN | 2, ., 3, ., 1, ., 1, 7, 9 | 0.2595 | 0.9493 | 0.9516 | yes | N/A |
| Q6GIA3 | FABF_STAAR | 2, ., 3, ., 1, ., 1, 7, 9 | 0.2595 | 0.9493 | 0.9516 | yes | N/A |
| Q9D404 | OXSM_MOUSE | 2, ., 3, ., 1, ., 4, 1 | 0.2367 | 0.9277 | 0.8387 | yes | N/A |
| Q6GAU2 | FABF_STAAS | 2, ., 3, ., 1, ., 1, 7, 9 | 0.2595 | 0.9493 | 0.9516 | yes | N/A |
| Q8KA28 | FABB_BUCAP | 2, ., 3, ., 1, ., 4, 1 | 0.3333 | 0.6506 | 0.6633 | yes | N/A |
| Q89AY4 | FABB_BUCBP | 2, ., 3, ., 1, ., 4, 1 | 0.2941 | 0.9301 | 0.9484 | yes | N/A |
| P43710 | FABB_HAEIN | 2, ., 3, ., 1, ., 4, 1 | 0.2631 | 0.9277 | 0.9482 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.766 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 415 | |||
| PRK07103 | 410 | PRK07103, PRK07103, polyketide beta-ketoacyl:acyl | 1e-158 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 2e-95 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 1e-76 | |
| TIGR03150 | 407 | TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei | 9e-67 | |
| PRK07314 | 411 | PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei | 4e-61 | |
| PRK06333 | 424 | PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei | 3e-49 | |
| PTZ00050 | 421 | PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein | 7e-48 | |
| PRK08439 | 406 | PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei | 1e-43 | |
| PLN02787 | 540 | PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei | 2e-41 | |
| PRK08722 | 414 | PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei | 7e-40 | |
| PLN02836 | 437 | PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei | 3e-35 | |
| PRK14691 | 342 | PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei | 3e-32 | |
| PRK07967 | 406 | PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei | 2e-29 | |
| PRK06501 | 425 | PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei | 3e-29 | |
| cd00833 | 421 | cd00833, PKS, polyketide synthases (PKSs) polymeri | 4e-29 | |
| PRK07910 | 418 | PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei | 1e-28 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 3e-28 | |
| pfam02801 | 119 | pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase | 4e-28 | |
| cd00828 | 407 | cd00828, elong_cond_enzymes, "elongating" condensi | 2e-25 | |
| PRK05952 | 381 | PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei | 5e-25 | |
| PRK09185 | 392 | PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei | 1e-24 | |
| COG3321 | 1061 | COG3321, COG3321, Polyketide synthase modules and | 2e-24 | |
| PRK09116 | 405 | PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei | 5e-22 | |
| pfam00109 | 243 | pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, | 1e-15 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 2e-11 | |
| smart00825 | 298 | smart00825, PKS_KS, Beta-ketoacyl synthase | 8e-07 | |
| cd00832 | 399 | cd00832, CLF, Chain-length factor (CLF) is a facto | 4e-05 |
| >gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Score = 451 bits (1163), Expect = e-158
Identities = 150/412 (36%), Positives = 244/412 (59%), Gaps = 12/412 (2%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+G+VS+IG SF+ +L+ G+ + + A + + L+ +
Sbjct: 9 VGVVSAIGQGRPSFAAALLAGRHAFGV-MRRPGRQVPDDAGAGLASAFIGAELDSLALPE 67
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQ 120
+ + +++ L Q ++ AA +AW ++ L + P+RIGL++ G N Q Q
Sbjct: 68 RLDAK----LLRRASLSAQAALAAAREAWRDAALGP----VDPDRIGLVVGGSNLQQREQ 119
Query: 121 YSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIHGMR 180
++ + +P +L P Y + FMD++ +G+ SE F IRGEGF +GGASASG + +I R
Sbjct: 120 ALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRGEGFTVGGASASGQLAVIQAAR 179
Query: 181 LIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYGQ 240
L+Q+ VDAC+ + A+ DLS E QA ++GAMG F + P+ CRPFD+ +GFIYG+
Sbjct: 180 LVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGFIYGE 239
Query: 241 ASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKN 300
A A+++E ++ + A+LLG + L A P+P+L E+ V+ + L+++GL
Sbjct: 240 ACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAGLGPE 299
Query: 301 MIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVI 360
IDY+N HG+ SPLGD+ E++A+ + +N+TKSLTGH L ++GIVE+IA+++
Sbjct: 300 DIDYVNPHGTGSPLGDETELAALFAS---GLAHAWINATKSLTGHGLSAAGIVELIATLL 356
Query: 361 QMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIIL 412
QMR F+HP+ NL+ PID + + G + S I +S SFGF GIN++++L
Sbjct: 357 QMRAGFLHPSRNLDEPIDERFRWVGSTAESARIRYALSLSFGFGGINTALVL 408
|
Length = 410 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 291 bits (747), Expect = 2e-95
Identities = 124/422 (29%), Positives = 208/422 (49%), Gaps = 33/422 (7%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+G V+ +G + F +L+ G+SGI S F I ++ +F+ ++ L++
Sbjct: 8 LGAVTPLGNGVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYLDR----- 62
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQ 120
KE ++ F Q ++ AA +A ++ L ++ PERIG++I
Sbjct: 63 ---KE-----LRRMDRFAQFALAAAEEALADAGLDPEELD--PERIGVVIGSGIGGLATI 112
Query: 121 YSLYPEFLKK-PEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIHGM 179
Y L+K P +SP + + + G ++ +RG + + A ASG I
Sbjct: 113 EEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVSTACASGAHAIGDAA 172
Query: 180 RLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239
RLI+ D + A ++P+ + F A+ A+ +N + P+K RPFDK +GF+ G
Sbjct: 173 RLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRN--DDPEKASRPFDKDRDGFVLG 230
Query: 240 QASAALLIE-----GNKNIKILNKSYLARLLGGVINL---HATASPEPNLNNEISVMNSV 291
+ + L++E + KI A +LG + H TA P+P+ M +
Sbjct: 231 EGAGVLVLESLEHAKARGAKIY-----AEILGYGASSDAYHITA-PDPDGEGAARAMRAA 284
Query: 292 LKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSG 351
L +GL IDY+N HG+S+PL D E AIK V+ H K+ ++STKS+TGH L ++G
Sbjct: 285 LADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAG 344
Query: 352 IVEIIASVIQMRKKFIHPNLNLESPID-NQANFSGKKSISININNVMSNSFGFSGINSSI 410
VE IA+++ +R + P +NLE P ++ ++ I +SNSFGF G N+S+
Sbjct: 345 AVEAIATLLALRDGVLPPTINLEEPDPECDLDYVPNEAREAPIRYALSNSFGFGGHNASL 404
Query: 411 IL 412
+
Sbjct: 405 VF 406
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 243 bits (622), Expect = 1e-76
Identities = 117/420 (27%), Positives = 197/420 (46%), Gaps = 29/420 (6%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKI-TDL 59
+GIVSS+G + +L+ GKSGI I F+ KI ++
Sbjct: 10 LGIVSSLGNGVEEVWAALLAGKSGIRP----------------ITRFDASGLGVKIAGEI 53
Query: 60 SEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHN--TTQ 117
+ + + F Q +++AA++A ++ L + R+G+ I
Sbjct: 54 KDLDDQIAKKERRFMDRFSQLAVVAAVEALEDAGLDNELNV--DMRVGVAIGSGIGGLED 111
Query: 118 NYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIH 177
+ +SP + + + G ++ +F ++G + A A+G I
Sbjct: 112 IEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPVTACATGAHAIGD 171
Query: 178 GMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFI 237
+RLI+ D + A ++P+ I F A+ A+ +N + P+K RPFDK +GF+
Sbjct: 172 AVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRN--DDPEKASRPFDKNRDGFV 229
Query: 238 YGQASAALLIEGNKNIKILNKSYLARLLGGVIN---LHATASPEPNLNNEISVMNSVLKQ 294
G+ + AL++E ++ A ++G H TA P P+ I M + L
Sbjct: 230 IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITA-PAPDGEGAIRAMRAALAD 288
Query: 295 SGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVE 354
+GL IDY+N HG+S+P DK E AIK V+ H L ++STKSLTGH L ++G VE
Sbjct: 289 AGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVE 348
Query: 355 IIASVIQMRKKFIHPNLNLESPIDNQA--NFSGKKSISININNVMSNSFGFSGINSSIIL 412
I S++ +R I P +NL++P A + ++ + + +SNSFGF G N+S++
Sbjct: 349 AIISLLALRDGIIPPTINLDNPDPEAADLDVVPNEARTGAVRAALSNSFGFGGTNASLVF 408
|
Length = 412 |
| >gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Score = 217 bits (556), Expect = 9e-67
Identities = 127/433 (29%), Positives = 210/433 (48%), Gaps = 55/433 (12%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+G V+ +G + F +L+ GKSGI S+ I ++ +F+ ++ ++
Sbjct: 8 LGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYID------ 61
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA----GHNTT 116
KKE A++ FIQ ++ AA +A +S L + ER+G+II G T
Sbjct: 62 --KKE-----ARRMDRFIQYALAAAKEAVEDSGL--DIEEEDAERVGVIIGSGIGGLETI 112
Query: 117 QNYQYSLYPEFLKKPEYLSPRY---AIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNI 173
+ L K P +SP + +I M + QI I + +G + A A+G
Sbjct: 113 EEQHIVLLE---KGPRRVSPFFIPMSIINMAAGQISIR---YGAKGPNHAVVTACATGTH 166
Query: 174 GIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233
I RLIQ D + A ++P+ I F A+ A+ +N + P+K RPFDK
Sbjct: 167 AIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRN--DDPEKASRPFDKDR 224
Query: 234 EGFIYGQASAALLIEGNKNIKILNKSYL------ARLLGGVINL-------HATASPEPN 280
+GF+ G+ + L++E A++ ++ H TA P P
Sbjct: 225 DGFVMGEGAGVLVLE----------ELEHAKARGAKIYAEIVGYGMSGDAYHITA-PAPE 273
Query: 281 LNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTK 340
M + LK +G+ +DY+N HG+S+PLGDK E AIK V+ +H KL ++STK
Sbjct: 274 GEGAARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTK 333
Query: 341 SLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDN-QANFSGKKSISININNVMSN 399
S+TGH L ++G +E I +V+ +R + P +NL++P ++ ++ I+ +SN
Sbjct: 334 SMTGHLLGAAGAIEAIFTVLALRDGIVPPTINLDNPDPECDLDYVPNEAREAKIDYALSN 393
Query: 400 SFGFSGINSSIIL 412
SFGF G N+S++
Sbjct: 394 SFGFGGHNASLVF 406
|
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407 |
| >gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 202 bits (517), Expect = 4e-61
Identities = 135/430 (31%), Positives = 213/430 (49%), Gaps = 49/430 (11%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+G VS +G D+ S +L+ GKSGI + S+ + I ++ +FN + +++
Sbjct: 9 LGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDYMSR----- 63
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA----GHNTT 116
KE A++ FIQ I AA QA ++ L + +RIG+II G T
Sbjct: 64 ---KE-----ARRMDRFIQYGIAAAKQAVEDAGLEITE--ENADRIGVIIGSGIGGLETI 113
Query: 117 QNYQYSLYPEFLKKPEYLSPRY---AIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNI 173
+ Q+ E K P +SP + AI M + + I + +G I A A+G
Sbjct: 114 EE-QHITLLE--KGPRRVSPFFVPMAIINMAAGHVSIR---YGAKGPNHSIVTACATGAH 167
Query: 174 GIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233
I RLI D + A ++P+ I F A A+ +N + P++ RPFDK
Sbjct: 168 AIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRN--DDPERASRPFDKDR 225
Query: 234 EGFIYGQASAALLIEG-----NKNIKILNKSYLARLLGGVIN---LHATASPEPNLNNEI 285
+GF+ G+ + L++E + KI A ++G + H TA P P+
Sbjct: 226 DGFVMGEGAGILVLEELEHAKARGAKIY-----AEVVGYGMTGDAYHMTA-PAPDGEGAA 279
Query: 286 SVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGH 345
M LK +G+ IDY+N HG+S+P GDK E AIK V+ H K+ ++STKS+TGH
Sbjct: 280 RAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGH 339
Query: 346 CLYSSGIVEIIASVIQMRKKFIHPNLNLESP---IDNQANFSGKKSISININNVMSNSFG 402
L ++G VE I SV+ +R + I P +NL++P D ++ ++ I+ +SNSFG
Sbjct: 340 LLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECD--LDYVPNEARERKIDYALSNSFG 397
Query: 403 FSGINSSIIL 412
F G N+S++
Sbjct: 398 FGGTNASLVF 407
|
Length = 411 |
| >gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 172 bits (437), Expect = 3e-49
Identities = 116/429 (27%), Positives = 197/429 (45%), Gaps = 33/429 (7%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGI----DYEINNTQSNFSKNI--IAKINNFNFKNSLN 54
MG VS +G + +F L+ G+SGI D+ + + + + +A+ F
Sbjct: 11 MGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAEDAEAGFD---- 66
Query: 55 KITDLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA--- 111
D K+ +K FI ++ AA +A + + ER II
Sbjct: 67 --PDRYLDPKD-----QRKMDRFILFAMAAAKEALAQAGWDPDTLED-RERTATIIGSGV 118
Query: 112 -GHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASAS 170
G +L + P LSP F+ + G +S + +G A A+
Sbjct: 119 GGFPAIAEAVRTLD---SRGPRRLSPFTIPSFLTNMAAGHVSIRYGFKGPLGAPVTACAA 175
Query: 171 GNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFD 230
G I RLI++ D + + + + F A A+ F + P++ RPFD
Sbjct: 176 GVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALS-TRFNDAPEQASRPFD 234
Query: 231 KLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVIN---LHATASPEPNLNNEISV 287
+ +GF+ G+ + L+IE ++ LA L+G + H TA PE +
Sbjct: 235 RDRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPE-DGEGARRA 293
Query: 288 MNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCL 347
M L+Q+G+ + +LN H +S+P+GD E++AIK+V+ H S L ++STKS TGH L
Sbjct: 294 MLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG-HVSGLAVSSTKSATGHLL 352
Query: 348 YSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA--NFSGKKSISININNVMSNSFGFSG 405
++G VE I +++ +R + P LNLE+P + K+ ++++ +SN FGF G
Sbjct: 353 GAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGG 412
Query: 406 INSSIILCK 414
+N+SI+ +
Sbjct: 413 VNASILFRR 421
|
Length = 424 |
| >gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 7e-48
Identities = 111/428 (25%), Positives = 199/428 (46%), Gaps = 24/428 (5%)
Query: 3 IVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSL-NKITDLSE 61
+V+ +G S +LI GKSGI ++ I + N ++ +I +
Sbjct: 1 VVTPLGVGAESTWEALIAGKSGIR-KLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVD 59
Query: 62 KKKEF--ILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLII-----AGHN 114
+ + ++ ++ AA +A ++KL + ERIG+ I + +
Sbjct: 60 QSEFDPSDFAPTKRESRATHFAMAAAREALADAKLDILS-EKDQERIGVNIGSGIGSLAD 118
Query: 115 TTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQI-GIMSEIFNIRGEGFIIGGASASGNI 173
T +LY K +SP Y I + N G+++ ++G A A+G
Sbjct: 119 LTDE-MKTLY---EKGHSRVSP-YFIPKILGNMAAGLVAIKHKLKGPSGSAVTACATGAH 173
Query: 174 GIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233
I R I+ D + ++P+ F + A+ K + + P++ RPFDK
Sbjct: 174 CIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTK-YNDDPQRASRPFDKDR 232
Query: 234 EGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVI--NLHATASPEPNLNNEISVMNSV 291
GF+ G+ + L++E ++ A + G + H +P P+ M +
Sbjct: 233 AGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENA 292
Query: 292 LKQSG-LKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNH-FSKLLLNSTKSLTGHCLYS 349
LK + N +DY+N H +S+P+GDKIE+ AIK+V+ + KL ++STK GH L +
Sbjct: 293 LKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGA 352
Query: 350 SGIVEIIASVIQMRKKFIHPNLNLESPIDN-QANFS-GKKSISI-NINNVMSNSFGFSGI 406
+G VE I +++ + ++ I P +NLE+P N GK + + +I+ V+S SFGF G+
Sbjct: 353 AGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGV 412
Query: 407 NSSIILCK 414
N++++ K
Sbjct: 413 NTALLFTK 420
|
Length = 421 |
| >gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 1e-43
Identities = 125/425 (29%), Positives = 206/425 (48%), Gaps = 39/425 (9%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+G+++S+G + S ++ G+ GI S+F I +I +F+ ++ D
Sbjct: 9 IGMINSLGLNKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFD----PTEVMDPK 64
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA-GHNTTQNY 119
E KK + FIQ + AA +A ++ ++ + ER G+ A G N
Sbjct: 65 EVKK---------ADRFIQLGLKAAREAMKDAGFLPEE--LDAERFGVSSASGIGGLPNI 113
Query: 120 QYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEI-FNIRGEGFIIGGASASGNIGIIHG 178
+ + F K P +SP + I N +G I ++G A A+G II
Sbjct: 114 EKNSIICFEKGPRKISP-FFIPSALVNMLGGFISIEHGLKGPNLSSVTACAAGTHAIIEA 172
Query: 179 MRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIY 238
++ I D L++ A + + P+ I F A+ A+ +N + PKK RPFDK +GF+
Sbjct: 173 VKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRN--DDPKKASRPFDKDRDGFVM 230
Query: 239 GQASAALLIEGNKNIKILNKSYLARLLG----GVINLHATASPEPNLNNEISVMNSVLKQ 294
G+ + AL++E ++ K A ++G G N H T+ P + M + L+
Sbjct: 231 GEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDAN-HITS---PAPEGPLRAMKAALEM 286
Query: 295 SGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVE 354
+G K IDY+N HG+S+P DK E +A+KE++ + ++STK GHCL ++G +E
Sbjct: 287 AGNPK--IDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIE 344
Query: 355 IIASVIQMRKKFIHPNLNLESP-----IDNQANFSGKKSISININNVMSNSFGFSGINSS 409
+ S++ MR + P +N E+P +D N + K +N VMSNSFGF G N
Sbjct: 345 AVISIMAMRDGILPPTINQETPDPECDLDYIPNVARKA----ELNVVMSNSFGFGGTNGV 400
Query: 410 IILCK 414
+I K
Sbjct: 401 VIFKK 405
|
Length = 406 |
| >gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Score = 153 bits (387), Expect = 2e-41
Identities = 127/426 (29%), Positives = 200/426 (46%), Gaps = 39/426 (9%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQ-SNFSKNIIAKINNFNFKNSLNKITD- 58
MG+VS +G D F N+L++G SGI EI S F I +I +F+ TD
Sbjct: 136 MGVVSPLGHDPDVFYNNLLEGVSGIS-EIERFDCSQFPTRIAGEIKSFS--------TDG 186
Query: 59 -----LSEKKKEFILHI--AQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA 111
LS++ +F+L++ A K L + +L K K +L IG +
Sbjct: 187 WVAPKLSKRMDKFMLYLLTAGKKALAD-----GGITEDVMKELDKTKCGVL---IGSAMG 238
Query: 112 GHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASG 171
G + +L + K + P +A M S +++ G + I A A+
Sbjct: 239 GMKVFNDAIEALRISYRKMNPFCVP-FATTNMGS---AMLAMDLGWMGPNYSISTACATS 294
Query: 172 NIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDK 231
N I++ I D L + + P+ + F A A+ +N + P K RP+D
Sbjct: 295 NFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRN--DDPTKASRPWDM 352
Query: 232 LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHA--TASPEPNLNNEISVMN 289
+GF+ G+ + LL+E ++ K + A LGG A P P I +
Sbjct: 353 NRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIE 412
Query: 290 SVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYS 349
L QSG+ K ++Y+N H +S+ GD E A+ + + +L +NSTKS+ GH L +
Sbjct: 413 KALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQN-PELRVNSTKSMIGHLLGA 471
Query: 350 SGIVEIIASVIQMRKKFIHPNLNLESP---IDNQANFSGKKSISININNVMSNSFGFSGI 406
+G VE IA+V +R ++HPN+NLE+P +D + KK ++I +SNSFGF G
Sbjct: 472 AGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKE-RLDIKVALSNSFGFGGH 530
Query: 407 NSSIIL 412
NSSI+
Sbjct: 531 NSSILF 536
|
Length = 540 |
| >gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 7e-40
Identities = 126/434 (29%), Positives = 203/434 (46%), Gaps = 51/434 (11%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
MG++S +G + S +L+ G+SGI + +NFS + +FN + ++K
Sbjct: 11 MGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSK----- 65
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIG-----------LI 109
K+ A+K LFIQ I A +QA +S L + RIG LI
Sbjct: 66 ---KD-----ARKMDLFIQYGIAAGIQALDDSGLEVTEEN--AHRIGVAIGSGIGGLGLI 115
Query: 110 IAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASA 169
AGH K P +SP + + + G +S + +RG I A
Sbjct: 116 EAGHQALVE----------KGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACT 165
Query: 170 SGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPF 229
+G I H R+I DA + A +P+ + F A A+ +N + P+K RP+
Sbjct: 166 TGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRN--DEPQKASRPW 223
Query: 230 DKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVIN---LHATASPEPNLNNEIS 286
DK +GF+ G + +++E ++ K A L+G ++ H T SP + +
Sbjct: 224 DKDRDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMT-SPSEDGSGGAL 282
Query: 287 VMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSK-LLLNSTKSLTGH 345
M + ++ +G+ I Y+N HG+S+P GD EI IK SK +L++STKS+TGH
Sbjct: 283 AMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGH 342
Query: 346 CLYSSGIVEIIASVIQMRKKFIHPNLNLESP-----IDNQANFSGKKSISININNVMSNS 400
L ++G VE I +V+ + + + P +NL+ P ID + + K ++ + NS
Sbjct: 343 LLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPHTARKVE---SMEYAICNS 399
Query: 401 FGFSGINSSIILCK 414
FGF G N S+I K
Sbjct: 400 FGFGGTNGSLIFKK 413
|
Length = 414 |
| >gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 3e-35
Identities = 87/255 (34%), Positives = 130/255 (50%), Gaps = 13/255 (5%)
Query: 167 ASASGNIGIIHGMRLIQNNIVDACLIISAMTDLS--PMEIQAFHAIGAMGGKNFYNFPKK 224
A A+G I R+IQ DA ++++ T+ S + I F A+ K F + P +
Sbjct: 183 ACATGAHSIGDAFRMIQFG--DADVMVAGGTESSIDALSIAGFSRSRALSTK-FNSCPTE 239
Query: 225 TCRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLG-GVI-NLHATASPEPNLN 282
RPFD +GF+ G+ + L++E ++ K A + G G+ + H P +
Sbjct: 240 ASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGR 299
Query: 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFS--KLLLNSTK 340
+ M L+QSGL N +DY+N H +S+PLGD +E AIK V+ H + L +STK
Sbjct: 300 GAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTK 359
Query: 341 SLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDN--QANFSG-KKSISININNVM 397
TGH L ++G VE I SV+ + P LNLE P D F S ++ I +
Sbjct: 360 GATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERP-DPIFDDGFVPLTASKAMLIRAAL 418
Query: 398 SNSFGFSGINSSIIL 412
SNSFGF G N+S++
Sbjct: 419 SNSFGFGGTNASLLF 433
|
Length = 437 |
| >gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Score = 124 bits (312), Expect = 3e-32
Identities = 89/290 (30%), Positives = 148/290 (51%), Gaps = 10/290 (3%)
Query: 129 KKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVD 188
+ P+ LSP F+ + G +S + +G A A+G I +R+I+NN D
Sbjct: 52 RGPKRLSPFTVPSFLVNLAAGHVSIKHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEAD 111
Query: 189 ACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYGQASAALLIE 248
L A + + + F A A+ +F + P+K RPFD +GF+ G+ + L+IE
Sbjct: 112 VALCGGAEAVIDTVSLAGFAAARALS-THFNSTPEKASRPFDTARDGFVMGEGAGLLIIE 170
Query: 249 GNKNIKILNKSYLARLLG---GVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYL 305
++ LA ++G H T+ E + M L+Q+G+ + +L
Sbjct: 171 ELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDG-DGAYRAMKIALRQAGITPEQVQHL 229
Query: 306 NTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKK 365
N H +S+P+GD EI+AIK ++ + L + STKS TGH L ++G +E I +V+ +R +
Sbjct: 230 NAHATSTPVGDLGEINAIKHLFGES-NALAITSTKSATGHLLGAAGGLETIFTVLALRDQ 288
Query: 366 FIHPNLNLESPIDNQA---NFSGKKSISININNVMSNSFGFSGINSSIIL 412
+ LNLE+P D A N + ++ +SN FGF+G+N+SI+L
Sbjct: 289 IVPATLNLENP-DPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILL 337
|
Length = 342 |
| >gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 2e-29
Identities = 112/431 (25%), Positives = 197/431 (45%), Gaps = 57/431 (13%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+GIVSSIG + SL +G+SGI + + + + L+ T L
Sbjct: 9 LGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNVK-------LD-PTGLI 60
Query: 61 EKKKEFIL-------HIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLII-AG 112
++K + ++A + QA ++ L +++ + R GLI +G
Sbjct: 61 DRKVMRFMGDASAYAYLAME-------------QAIADAGLSEEQ--VSNPRTGLIAGSG 105
Query: 113 HNTTQNYQYSL-YPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASG 171
+T+N + + P+ + P + M S ++ F I+G + I A A+
Sbjct: 106 GGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYSISSACATS 165
Query: 172 NIGIIHGMRLIQNNIVDACLIISA--MTDLSPMEIQAFHAIGAMGGKNFYN-FPKKTCRP 228
I + + IQ D I+ A +L F A+GA+ K YN P+K R
Sbjct: 166 AHCIGNAVEQIQLGKQD---IVFAGGGEELDWEMSCLFDAMGALSTK--YNDTPEKASRA 220
Query: 229 FDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASP----EPNLNNE 284
+D +GF+ +++E ++ A++ ++ AT+ P+
Sbjct: 221 YDANRDGFVIAGGGGVVVVEELEHALARG----AKIYAEIVGYGATSDGYDMVAPSGEGA 276
Query: 285 ISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTG 344
+ M L + + IDY+NTHG+S+P+GD E+ AI+EV+ + +++TKSLTG
Sbjct: 277 VRCMQMAL--ATVD-TPIDYINTHGTSTPVGDVKELGAIREVFGDKSPA--ISATKSLTG 331
Query: 345 HCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA---NFSGKKSISININNVMSNSF 401
H L ++G+ E I S++ M FI P+ N+E +D QA + + + + VMSNSF
Sbjct: 332 HSLGAAGVQEAIYSLLMMEHGFIAPSANIEE-LDPQAAGMPIVTETTDNAELTTVMSNSF 390
Query: 402 GFSGINSSIIL 412
GF G N++++
Sbjct: 391 GFGGTNATLVF 401
|
Length = 406 |
| >gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 3e-29
Identities = 77/274 (28%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 151 MSEIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAI 210
+++ F RG + A ASG I G+ I+ D L I+ +S + F +
Sbjct: 158 LADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLL 217
Query: 211 GAMGGKNFYNFPKKTCRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVI- 269
A+ +N + P+K +PF K +GF+ + + AL++E ++ A++LG V
Sbjct: 218 SALSTQN--DPPEKASKPFSKDRDGFVMAEGAGALVLESLESAVARG----AKILGIVAG 271
Query: 270 ------NLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAI 323
+ H T S P+ + I + + L +GL IDY+N HG+S+P DK+E +
Sbjct: 272 CGEKADSFHRTRS-SPDGSPAIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGL 330
Query: 324 KEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP-----ID 378
V+ + + ++S KS+ GH L ++G VE + S++ ++ + P +N ++P +D
Sbjct: 331 SAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLD 390
Query: 379 NQANFSGKKSISININNVMSNSFGFSGINSSIIL 412
N + + V+SNSFGF G N+S++L
Sbjct: 391 VVPNVARDAR----VTAVLSNSFGFGGQNASLVL 420
|
Length = 425 |
| >gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 4e-29
Identities = 74/321 (23%), Positives = 132/321 (41%), Gaps = 50/321 (15%)
Query: 121 YSLYPEFLKKPEYLSPRYAIQFMDSNQI-GIMSEIFNIRGEGFIIGGASASGNIGIIHGM 179
S Y E L + YA + +S F++RG + A +S + +
Sbjct: 122 SSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGPSLTVDTACSSSLVALHLAC 181
Query: 180 RLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239
+ +++ D L+ LSP F G + P CRPFD A+G++ G
Sbjct: 182 QSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLS-------PDGRCRPFDADADGYVRG 234
Query: 240 QASAALL-------IEGNKNIKILNKSYLARLLGGVIN--LHATASPEPNLNNEISVMNS 290
+ ++ + I A + G +N P+ + +++
Sbjct: 235 EGVGVVVLKRLSDALRDGDRI-------YAVIRGSAVNQDGRTKGITAPSGEAQAALIRR 287
Query: 291 VLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVY---KNHFSKLLLNSTKSLTGHCL 347
++G+ + IDY+ HG+ +PLGD IE+ A+ +V+ ++ LL+ S KS GH
Sbjct: 288 AYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLE 347
Query: 348 YSSGIVEIIASVIQMRKKFIHPNLNLESP---IDNQA-------------NFSGKKSISI 391
++G+ +I V+ + I PNL+ E+P ID + +G + +
Sbjct: 348 AAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESPLRVPTEARPWPAPAGPRRAGV 407
Query: 392 NINNVMSNSFGFSGINSSIIL 412
+SFGF G N+ +IL
Sbjct: 408 -------SSFGFGGTNAHVIL 421
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421 |
| >gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 1e-28
Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 14/255 (5%)
Query: 167 ASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGA-MGGKNFYNFPKKT 225
A ASG+ I R I D + T + + I F + M N + P
Sbjct: 170 ACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNN--DDPAGA 227
Query: 226 CRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVIN---LHATASPEPNLN 282
CRPFDK +GF++G+ A ++IE ++ K + LAR++G I H A P+PN
Sbjct: 228 CRPFDKDRDGFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVA-PDPNGE 286
Query: 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSL 342
M ++ +GL ID++N H + + +GD E AI H + + + KS
Sbjct: 287 RAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGGH--RPAVYAPKSA 344
Query: 343 TGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP---IDNQANFSGKKSISININNVMSN 399
GH + + G VE I +V+ +R I P LNLE+ ID + + N ++N
Sbjct: 345 LGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEID--LDVVAGEPRPGNYRYAINN 402
Query: 400 SFGFSGINSSIILCK 414
SFGF G N ++ +
Sbjct: 403 SFGFGGHNVALAFGR 417
|
Length = 418 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 113 bits (283), Expect = 3e-28
Identities = 60/316 (18%), Positives = 126/316 (39%), Gaps = 24/316 (7%)
Query: 103 PERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGF 162
+G+++ T + P + M G ++ I G +
Sbjct: 35 NPIVGVVVG---TGGGSPRFQVFG-ADAMRAVGPYVVTKAMFPGASGQIATPLGIHGPAY 90
Query: 163 IIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFP 222
+ A A + +QN D L + +PM+ + P
Sbjct: 91 DVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALST-------P 143
Query: 223 KKTCRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATA------S 276
+K R FD A+GF++G + AL++E ++ A + ++ AT +
Sbjct: 144 EKASRTFDAAADGFVFGDGAGALVVEELEHALARG----AHIYAEIVGTAATIDGAGMGA 199
Query: 277 PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLL 336
P+ L +GL IDYL HG+ +P+GD E+ ++ + + +
Sbjct: 200 FAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDK--SPAV 257
Query: 337 NSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNV 396
++TK++TG+ ++ ++ + +V+ + FI P++++E +D ++ +
Sbjct: 258 SATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEE-LDEAGLNIVTETTPRELRTA 316
Query: 397 MSNSFGFSGINSSIIL 412
+ N FG G N++++L
Sbjct: 317 LLNGFGLGGTNATLVL 332
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain | Back alignment and domain information |
|---|
Score = 106 bits (268), Expect = 4e-28
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 261 LARLLGGVINLHATAS---PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317
A + G +N A PN + + + L +GL +DY+ HG+ +PLGD
Sbjct: 1 YAVIRGSAVNQDGAAHNGLTAPNGPAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDP 60
Query: 318 IEISAIKEVYKNHFSK--LLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLE 374
IE A+K V+ L + S KS GH ++G+ +I +V+ +R I P LNL+
Sbjct: 61 IEAEALKAVFGPGRDSQPLPVGSVKSNIGHLEAAAGVAGLIKAVLALRHGVIPPTLNLD 119
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 119 |
| >gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 82/433 (18%), Positives = 176/433 (40%), Gaps = 56/433 (12%)
Query: 2 GIVSSIGFDIA---SFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITD 58
G+VS G F +L +G+SGI + +S F + + +I D
Sbjct: 9 GVVSPHGEGCDEVEEFWEALREGRSGIA-PVARLKSRFDRGVAGQIPTG----------D 57
Query: 59 LSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQN 118
+ +++A +A ++ + Y++ P +G+++ +
Sbjct: 58 IPGW---DAKRTGIVDR-TTLLALVATEEALADAGI-TDPYEVHPSEVGVVV--GSGMGG 110
Query: 119 Y---QYSLYPEFLKKPEYLSPRYAIQF-MDSNQIGIMSEIFNIRGEGFIIG--GASASGN 172
+ + Y+SP++ + + + I+ + G I GA A+
Sbjct: 111 LRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNIL----LLSSHGPIKTPVGACATAL 166
Query: 173 IGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKL 232
+ + I++ D ++ + D + F +GA+ P++ RPFD+
Sbjct: 167 EALDLAVEAIRSGKADIV-VVGGVEDPLEEGLSGFANMGALS--TAEEEPEEMSRPFDET 223
Query: 233 AEGFIYGQASAALLIEGNKNIKILNKSYLARLLG----GVINLHAT------ASPEPNLN 282
+GF+ + + L++E ++ LA G G + A+ S
Sbjct: 224 RDGFVEAEGAGVLVLE---------RAELALARGAPIYGRVAGTASTTDGAGRSVPAGGK 274
Query: 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSL 342
+ + L ++GL + +D ++ HG+S+P D E AI EV + L + + K+L
Sbjct: 275 GIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKAL 334
Query: 343 TGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDN--QANFSGK-KSISININNVMSN 399
GH ++G +++I ++ + I P NL+ + + G + +++ + + N
Sbjct: 335 FGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLSVVGLSRDLNLKVRAALVN 394
Query: 400 SFGFSGINSSIIL 412
+FGF G N++++L
Sbjct: 395 AFGFGGSNAALVL 407
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407 |
| >gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 5e-25
Identities = 71/252 (28%), Positives = 129/252 (51%), Gaps = 17/252 (6%)
Query: 166 GASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKT 225
A A+G I G+ LIQ + + ++P+ + F +GA+ K
Sbjct: 144 AACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALA--------KTG 195
Query: 226 CRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLG-GVIN--LHATASPEPNLN 282
PFD+ EG + G+ A L++E + + ++LG G+ H +A PEP+
Sbjct: 196 AYPFDRQREGLVLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSA-PEPDGK 254
Query: 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSL 342
+ I+ + L +SGL IDY++ HG+++ L D+ E + I+ ++ ++ ++STK
Sbjct: 255 SAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP---HRVAVSSTKGA 311
Query: 343 TGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFG 402
TGH L +SG + + S++ +R + + P + L+ P + NF +++ + NV+ SFG
Sbjct: 312 TGHTLGASGALGVAFSLLALRHQQLPPCVGLQEP-EFDLNFV-RQAQQSPLQNVLCLSFG 369
Query: 403 FSGINSSIILCK 414
F G N++I L K
Sbjct: 370 FGGQNAAIALGK 381
|
Length = 381 |
| >gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 1e-24
Identities = 67/279 (24%), Positives = 113/279 (40%), Gaps = 52/279 (18%)
Query: 155 FNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMG 214
+ G + I A +S RL++ + DA ++ + L + + F+++ ++
Sbjct: 147 LGLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLS 205
Query: 215 GKNFYNFPKKTCRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINL--- 271
+ CRPF +G G+A+A L+E R + L
Sbjct: 206 --------PQPCRPFSANRDGINIGEAAAFFLLE--------------REDDAAVALLGV 243
Query: 272 ------HATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKE 325
H ++P P I M L +GL I Y+N HG+++PL D +E A+
Sbjct: 244 GESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAA 303
Query: 326 VYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP--------- 376
V+ + + +STK LTGH L ++G VE + +R N P
Sbjct: 304 VFGDG---VPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYL 360
Query: 377 IDNQANFSGKKSISININNVMSNSFGFSGINSSIILCKK 415
++N ++ I V+SNSF F G N S+I +
Sbjct: 361 VENAQ--------ALAIRYVLSNSFAFGGNNCSLIFGRA 391
|
Length = 392 |
| >gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 2e-24
Identities = 68/305 (22%), Positives = 115/305 (37%), Gaps = 47/305 (15%)
Query: 135 SPRYAIQFMDSNQI-GIMSEIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLII 193
P YAI S+ G +S + + G + A +S + + + ++ D L
Sbjct: 140 EPEYAITGNSSSVAAGRISYVLGLSGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAG 199
Query: 194 SAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYGQASAALL------- 246
LSP F A G + P C+ FD A+G++ G+ + ++
Sbjct: 200 GVNLVLSPESSYLFSAGGMLS-------PDGRCKAFDADADGYVRGEGAGVVVLKRLSDA 252
Query: 247 IEGNKNIKILNKSYLARLLG-GVINLHATASPE-PNLNNEISVMNSVLKQSGLKKNMIDY 304
I A + G V + PNL + V+ L +G+ + Y
Sbjct: 253 ERDGDRI-------YAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQY 305
Query: 305 LNTHGSSSPLGDKIEISAIKEVYKNHFSKL--LLNSTKSLTGHCLYSSGIVEIIASVIQM 362
+ HG+ +PLGD IE +A+ VY + S KS GH ++GI +I + + +
Sbjct: 306 VEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALAL 365
Query: 363 RKKFIHPNLNLESPIDNQANFSGKKSISININNVMS---------------NSFGFSGIN 407
+ +I P L+ ++P S +SFGF G N
Sbjct: 366 KHGYIPPTLHFDTPNPEIDF------DSSPFVVPTEATPWPTGGGPRRAGVSSFGFGGTN 419
Query: 408 SSIIL 412
+ +IL
Sbjct: 420 AHVIL 424
|
Length = 1061 |
| >gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 97.0 bits (242), Expect = 5e-22
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 7/217 (3%)
Query: 198 DLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYGQASAALLIEGNKNIKILN 257
+L P E F + A +N + P+ T RPFD +G + G+ + L++E ++ K
Sbjct: 193 ELCPTEAAVFDTLFATSTRN--DAPELTPRPFDANRDGLVIGEGAGTLVLEELEHAKARG 250
Query: 258 KSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317
+ A ++G N +P M LK +GL I Y+N HG+++ GD
Sbjct: 251 ATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDI 310
Query: 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPI 377
E A V+ ++ ++S KS GH L + G +E S+ M + + P LNL
Sbjct: 311 AESQATAAVFGA---RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVD 367
Query: 378 DN--QANFSGKKSISININNVMSNSFGFSGINSSIIL 412
++ ++ I+ VMSN+F F GIN+S+I
Sbjct: 368 PACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIF 404
|
Length = 405 |
| >gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Score = 75.7 bits (187), Expect = 1e-15
Identities = 48/252 (19%), Positives = 88/252 (34%), Gaps = 26/252 (10%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNF--SKNIIAKINNFNFKNSLNKITD 58
MG G F L+ G+ I E S + +I F+F + I+
Sbjct: 9 MGCRFPGGVGPEEFWELLLAGRDAIR-EFPADLSGLYPPSRVAGEIYGFDFDAAFFGISP 67
Query: 59 LSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLII-AGHNTTQ 117
A+ + ++ AA +A ++ L +R G+ + +G
Sbjct: 68 ----------REAEAMDPQQRLALEAAWEALEDAGL-DPASLRGSDRTGVFVGSGSGDYA 116
Query: 118 NYQ-YSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGII 176
Q + YL+ + + +I +RG + A +S + +
Sbjct: 117 ELQALDSAGGPRRVSPYLTGAWMPSVA-AGRISYR---LGLRGPSVTVDTACSSSLVALH 172
Query: 177 HGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGF 236
+R I+ D L L+P F A GA+ + C+ FD A+GF
Sbjct: 173 AAVRSIRRGECDLALAGGVEAPLTPGGFAGFSAAGALLSPD------GPCKAFDPFADGF 226
Query: 237 IYGQASAALLIE 248
+ G+ A+L++
Sbjct: 227 VRGEGVGAVLLK 238
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 2e-11
Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 26/156 (16%)
Query: 262 ARLLGGVINLHATASPE-----PNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGD 316
A +++ AT + L+ +GL + IDY+ HG+ +P+GD
Sbjct: 120 AHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGD 179
Query: 317 KIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP 376
+E++ + +++T +TGH L ++G+ + ++ + +FI P +P
Sbjct: 180 AVELALGLDPDGVR--SPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPP-----TP 232
Query: 377 IDNQANFSGKKSISININNVMSNSFGFSGINSSIIL 412
+ + V+ FG G N++++L
Sbjct: 233 REPRT--------------VLLLGFGLGGTNAAVVL 254
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Score = 50.0 bits (121), Expect = 8e-07
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 23/95 (24%)
Query: 334 LLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP---ID-NQANF------ 383
LL+ S KS GH ++G+ +I V+ ++ I P L+ E+P ID ++
Sbjct: 209 LLIGSVKSNIGHLEAAAGVAGLIKVVLALKHGVIPPTLHFETPNPHIDLEESPLRVPTEL 268
Query: 384 ------SGKKSISININNVMSNSFGFSGINSSIIL 412
+ + +SFGF G N+ +IL
Sbjct: 269 TPWPPPGRPRRAGV-------SSFGFGGTNAHVIL 296
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298 |
| >gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 4e-05
Identities = 59/265 (22%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 129 KKPEYLSPR------YAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIHGMRLI 182
K P ++S YA+ ++ QI I +RG ++ A G + RL+
Sbjct: 122 KGPRHVSAYQSFAWFYAV---NTGQISIRH---GMRGPSGVVVAEQAGGLDALAQARRLV 175
Query: 183 QNNIVDACLIISAMTD--LSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYGQ 240
+ L++S D L P A + G + + P + PFD A G++ G+
Sbjct: 176 RRG---TPLVVSGGVDSALCPWGWVAQLSSGRLSTSDD---PARAYLPFDAAAAGYVPGE 229
Query: 241 ASAALLIEGNKNIKILNKSYLARLLGGVINLHATASP------EPNLNNEISVMNSVLKQ 294
A L++E + AR+ G + AT P P L I L
Sbjct: 230 GGAILVLEDAAA----ARERGARVYGEIAGYAATFDPPPGSGRPPGLARAI---RLALAD 282
Query: 295 SGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSG-IV 353
+GL +D + + P D+ E +A+ V+ + + + K++TG LY+ G +
Sbjct: 283 AGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR--GVPVTAPKTMTGR-LYAGGAPL 339
Query: 354 EIIASVIQMRKKFIHPNLNLESPID 378
++ +++ +R I P +N+
Sbjct: 340 DVATALLALRDGVIPPTVNVTDVPP 364
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 415 | |||
| KOG1394|consensus | 440 | 100.0 | ||
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 100.0 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 100.0 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 100.0 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 100.0 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 100.0 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 100.0 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 100.0 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 100.0 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 100.0 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 100.0 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 100.0 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 100.0 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 100.0 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 100.0 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| KOG1202|consensus | 2376 | 100.0 | ||
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 100.0 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 100.0 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 100.0 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 100.0 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.94 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.93 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.93 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.93 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.92 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 99.92 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.92 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.92 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.92 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.91 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.91 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.91 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.91 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.91 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.9 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK06158 | 384 | thiolase; Provisional | 99.89 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.89 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 99.89 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.89 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.89 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 99.89 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.89 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.89 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.89 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 99.89 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 99.89 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.88 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.88 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.87 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 99.87 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.87 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.86 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 99.86 | |
| KOG1390|consensus | 396 | 99.86 | ||
| KOG1406|consensus | 408 | 99.85 | ||
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.85 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.81 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 99.81 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.8 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 99.8 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.78 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.78 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.76 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.75 | |
| KOG1391|consensus | 396 | 99.74 | ||
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.74 | |
| KOG1389|consensus | 435 | 99.73 | ||
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.72 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.71 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.69 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.68 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.65 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.64 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.63 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.62 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 99.61 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 99.56 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.54 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.52 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 99.51 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 99.49 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 99.46 | |
| KOG1392|consensus | 465 | 99.44 | ||
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 99.44 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 99.39 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 99.38 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 99.38 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 99.35 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.32 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 99.27 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 99.25 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 99.24 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.21 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 99.15 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 99.11 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 99.09 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 99.07 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 98.97 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 98.97 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 98.92 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 98.67 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 98.4 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 98.38 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 98.28 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 98.23 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 98.1 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 97.63 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 97.47 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 90.36 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 90.18 | |
| PRK06158 | 384 | thiolase; Provisional | 87.21 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 87.16 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 85.76 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 85.18 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 84.2 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 83.76 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 82.17 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 82.01 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 81.55 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 81.52 | |
| KOG1393|consensus | 462 | 81.52 | ||
| PRK07855 | 386 | lipid-transfer protein; Provisional | 81.41 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 81.04 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 80.76 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 80.74 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 80.3 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 80.28 |
| >KOG1394|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-81 Score=557.28 Aligned_cols=397 Identities=28% Similarity=0.403 Sum_probs=364.7
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+|||+|.+++++|++|.+|+++|+.+..++.. .++.++++ .++.|+... +++..+.|+|++..+|
T Consensus 31 mG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k----~~p~~v~g--------~Ip~f~~e~-~~s~~~~r~ms~~~~~ 97 (440)
T KOG1394|consen 31 MGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYK----SIPFTVAG--------KIPRFSVED-YVSKGDERRMSKFTKL 97 (440)
T ss_pred cceeecCCCChHHHHHHhhccccCcccccccccc----cCcchhee--------ecccccccc-ccchhhhhhhhHHHHH
Confidence 7999999999999999999999999999876555 77888888 899999887 8899999999999999
Q ss_pred HHHHHHHHHHhCCCCCC---CCCcCCCcEEEEEe-cCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 81 SIIAALQAWYNSKLHKK---KYKILPERIGLIIA-GHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~---~~~~~~~~~gv~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
++.|+++||+|+++.+. + .+..++||.+| ++++..+.-+.......++.++++|++.|..+.|+.++++++.+|
T Consensus 98 al~aa~eAL~da~~~~~~~~e--~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~g 175 (440)
T KOG1394|consen 98 ALTAAEEALKDAGLLDVNLSE--EDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYG 175 (440)
T ss_pred HHHHHHHHHHhcCCCCcccch--hhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhc
Confidence 99999999999999765 4 57789999999 556555554444444457789999999999999999999999999
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCc
Q psy5222 157 IRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGF 236 (415)
Q Consensus 157 l~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~ 236 (415)
++||+++++++|++|..+|..|.+.|+.|++|++|+||.|.++.|..+.+|.+.+.|+++++ +|...+||||.+||||
T Consensus 176 l~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd--~P~~aSRPfD~~RdGF 253 (440)
T KOG1394|consen 176 LRGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRND--NPQKASRPFDKKRDGF 253 (440)
T ss_pred CcCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCC--CccccCCCCccCCCce
Confidence 99999999999999999999999999999999999999999999999999999999998653 6889999999999999
Q ss_pred cccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCC
Q psy5222 237 IYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPL 314 (415)
Q Consensus 237 ~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~ 314 (415)
++|||++++|||+.|+|++||++||+++.|++.+.|..|+ +.|++.+...+|++||++||++|+||+||++|+|+|+.
T Consensus 254 VmGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~ 333 (440)
T KOG1394|consen 254 VMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVNAHATSTPL 333 (440)
T ss_pred eeccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeeecccccCcC
Confidence 9999999999999999999999999999999999999999 66688999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccC
Q psy5222 315 GDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISIN 392 (415)
Q Consensus 315 ~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~ 392 (415)
+|..|..|++++|++.....+|++.|+.+||.+||+|.++.+..+++++++.+||++|++.+ ++..+ +++....+|+
T Consensus 334 GD~aE~~Ai~~vf~~~~~~~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~-d~~~d~~~~~~~~~~~~ 412 (440)
T KOG1394|consen 334 GDAAEAEAIKRVFGEHNIASKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENP-DPGVDLDYVPLKASEKK 412 (440)
T ss_pred chHHHHHHHHHHhccCCcccccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCC-Ccccccccccccccccc
Confidence 99999999999999876566899999999999999999999999999999999999999999 87765 6666666554
Q ss_pred ----CCEEEEeccCcCCceeEEEEeeC
Q psy5222 393 ----INNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 393 ----~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
.++++.|||||||+|+++++.++
T Consensus 413 ~~~~~~valsNSFGFGGtNaSl~fa~~ 439 (440)
T KOG1394|consen 413 GGNKVRVALSNSFGFGGTNASLCFAKF 439 (440)
T ss_pred ccccceEEEecccccCCcchhheeeec
Confidence 57999999999999999999864
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-75 Score=569.99 Aligned_cols=396 Identities=28% Similarity=0.401 Sum_probs=355.9
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.++++||++|++|++++++++.++.. .+..++++ .+++||+++| +++++.++||+++++
T Consensus 11 ~g~~~p~g~~~~~~w~~L~~g~s~i~~~~~~~~~----~~~~~~~g--------~i~~~~~~~~-~~~~~~~~~d~~~~~ 77 (414)
T PRK08722 11 MGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTT----NFSTRFAG--------LVKDFNCEEY-MSKKDARKMDLFIQY 77 (414)
T ss_pred eEEECCCCCCHHHHHHHHHhCCCeeeecCccccc----cCCCceeE--------EcCCCChhHc-CCHHHHhhcCHHHHH
Confidence 6999999999999999999999999998766555 56677777 7778999884 899999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhh-hcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEF-LKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
++.++++||+|||++.+. .+..++||++|+..+.....+.++..+ .+++..++|..++..++|.+++++++.||++|
T Consensus 78 ~l~a~~~Al~dAGl~~~~--~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~G 155 (414)
T PRK08722 78 GIAAGIQALDDSGLEVTE--ENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRG 155 (414)
T ss_pred HHHHHHHHHHHcCCCccc--cCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCCC
Confidence 999999999999998777 778899999996655444333334333 35667789999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++++++|+|++.||..|+++|++|++|+|||||+|...++..+..|..++.++..+. +|+..|||||.+++|+++|
T Consensus 156 p~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~--~p~~~~rpfd~~~~G~~~g 233 (414)
T PRK08722 156 PNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRND--EPQKASRPWDKDRDGFVLG 233 (414)
T ss_pred CccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCC--CCccccCcCcCCCCceEee
Confidence 99999999999999999999999999999999999998889999999999999975432 3778999999999999999
Q ss_pred ceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCC--CCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH
Q psy5222 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPE--PNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~--~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~ 317 (415)
||++++|||++++|+++|+++|++|.|++.++|+.+... |...+..++|+++|+++|++++||||||+|||||+.+|.
T Consensus 234 EGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~ 313 (414)
T PRK08722 234 DGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDV 313 (414)
T ss_pred ceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCH
Confidence 999999999999999999999999999999999887744 456778999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC-CCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCccccc-CC
Q psy5222 318 IEISAIKEVYKNH-FSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISI-NI 393 (415)
Q Consensus 318 ~E~~al~~~~~~~-~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~-~~ 393 (415)
.|..+|+++|+.. .++++|++.|+++||+++|||++++++++++|++++|||++|+++| +|.++ +++.+.+++ +.
T Consensus 314 ~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~-~~~~~~~~v~~~~~~~~~~ 392 (414)
T PRK08722 314 AEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDP-EEGLDIDLVPHTARKVESM 392 (414)
T ss_pred HHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCC-CCCCCcccCCCccccCCCC
Confidence 9999999999864 3468999999999999999999999999999999999999999999 98875 677666665 58
Q ss_pred CEEEEeccCcCCceeEEEEee
Q psy5222 394 NNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 394 ~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+++++|||||||+|+|+||++
T Consensus 393 ~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 393 EYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred CEEEEecccCCCceEEEEEec
Confidence 999999999999999999986
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-76 Score=560.23 Aligned_cols=395 Identities=30% Similarity=0.470 Sum_probs=358.0
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.+++++|++|..|+++++.++.++.. ++..++.+ .+++| .. .+.+++.|+|++.++|
T Consensus 10 ~g~vs~lG~~~~~~~~~l~~g~sgi~~~~~~~~~----~~~~~~~~--------~i~~~--~~-~~~~~~~~~~d~~~~~ 74 (412)
T COG0304 10 LGIVSSLGNGVEEVWAALLAGKSGIRPITRFDAS----GLGVKIAG--------EIKDL--DD-QIAKKERRFMDRFSQL 74 (412)
T ss_pred ceeeecccCCHHHHHHHHhcCCCCCCcccccccc----CCCCcccc--------ccccc--cc-ccchHHhhcccHHHHH
Confidence 6999999999999999999999999999888777 67778877 77776 33 5678888899999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecC-CChhhHHHhhhhhhhcCCCC-CCchhhcccccchHHHHHHHHhCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGH-NTTQNYQYSLYPEFLKKPEY-LSPRYAIQFMDSNQIGIMSEIFNIR 158 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~ia~~lgl~ 158 (415)
++.|+.+|++|||+.... ..++ ++|+++|+. ++.............++..+ ++|.+++..++|+.++++++.+|++
T Consensus 75 a~~Aa~eAl~dAgl~~~~-~~~~-r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g~~ 152 (412)
T COG0304 75 AVVAAVEALEDAGLDNEL-NVDM-RVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLK 152 (412)
T ss_pred HHHHHHHHHHHcCCCccc-ccCc-cEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHhCCC
Confidence 999999999999998322 1334 999999944 44444433344444455554 8999999999999999999999999
Q ss_pred CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCccc
Q psy5222 159 GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIY 238 (415)
Q Consensus 159 Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~ 238 (415)
||++++.++|+||..||..|+++|+.|++|+|||||+|..+++..+..|..++++++.+ ++|+..|||||++++||++
T Consensus 153 G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~n--d~p~~asrPfd~~RdGfv~ 230 (412)
T COG0304 153 GPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRN--DDPEKASRPFDKNRDGFVI 230 (412)
T ss_pred CCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCC--CCccccCCCCCCCCCCEEE
Confidence 99999999999999999999999999999999999999899999999999999999874 3799999999999999999
Q ss_pred cceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCC
Q psy5222 239 GQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGD 316 (415)
Q Consensus 239 geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d 316 (415)
|||++++|||+.++|++||++||++|.|++.+.|++|+ +.|++++..++|++||++||++++|||||+.|||+|+.+|
T Consensus 231 gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD 310 (412)
T COG0304 231 GEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTPAND 310 (412)
T ss_pred ecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCcc
Confidence 99999999999999999999999999999999999999 4456999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCC---CCcccCcccccCC
Q psy5222 317 KIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQ---ANFSGKKSISINI 393 (415)
Q Consensus 317 ~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~---~~~v~~~~~~~~~ 393 (415)
..|..+++++|+.....++|++.|+++||++||+|.++.+.++++|+++++||++|++++ +|+ +++++++.+....
T Consensus 311 ~~E~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~-dp~~~~l~~v~~~~~~~~~ 389 (412)
T COG0304 311 KAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNP-DPEAADLDVVPNEARTGAV 389 (412)
T ss_pred HHHHHHHHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCC-CcccccccccCCcccccce
Confidence 999999999999877679999999999999999999999999999999999999999999 884 5588888887779
Q ss_pred CEEEEeccCcCCceeEEEEeeC
Q psy5222 394 NNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 394 ~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+.+++|||||||+|+++|++++
T Consensus 390 ~~~lsnsfGFGG~Na~lv~~~~ 411 (412)
T COG0304 390 RAALSNSFGFGGTNASLVFKRY 411 (412)
T ss_pred eEEEecccccCCcceEEEEecC
Confidence 9999999999999999999975
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-76 Score=581.77 Aligned_cols=396 Identities=27% Similarity=0.401 Sum_probs=355.8
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.++++||++|++|++++++++.++.. .++.++++ .+++|+++. .+++++.++||+.+++
T Consensus 136 ~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~f~~~----~~~~~~ag--------~i~~f~~~~-~l~~k~~r~md~~~~~ 202 (540)
T PLN02787 136 MGVVSPLGHDPDVFYNNLLEGVSGISEIERFDCS----QFPTRIAG--------EIKSFSTDG-WVAPKLSKRMDKFMLY 202 (540)
T ss_pred eEEECCCCCCHHHHHHHHHcCCCcccccCccchh----hCCccccc--------cccccChhh-cCCHHHHHhCCHHHHH
Confidence 7999999999999999999999999999866555 56677777 777888776 6899999999999999
Q ss_pred HHHHHHHHHHhCCCCCC---CCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCC
Q psy5222 81 SIIAALQAWYNSKLHKK---KYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNI 157 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~---~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 157 (415)
++.++++||+|||++++ . +++.++||++|+..+......+....+......++|..++..+.|..+.+++..||+
T Consensus 203 al~Aa~eAL~dAGl~~~~~~~--~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl 280 (540)
T PLN02787 203 LLTAGKKALADGGITEDVMKE--LDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGW 280 (540)
T ss_pred HHHHHHHHHHHcCCCcccccc--cCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCC
Confidence 99999999999999754 4 678899999996655444333444444455667889889999999999999999999
Q ss_pred CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcc
Q psy5222 158 RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFI 237 (415)
Q Consensus 158 ~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~ 237 (415)
+||+++|+++|+|++.||..|+++|++|++|+|||||+|..+.+..+..|...+.++..+. +|+..|||||.+++|++
T Consensus 281 ~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~--~p~~~~rPFD~~rdGfv 358 (540)
T PLN02787 281 MGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRND--DPTKASRPWDMNRDGFV 358 (540)
T ss_pred CCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCC--CcccccCCcccCCCCcc
Confidence 9999999999999999999999999999999999999998899999999999999986432 47789999999999999
Q ss_pred ccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCC
Q psy5222 238 YGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLG 315 (415)
Q Consensus 238 ~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~ 315 (415)
+|||++++|||++++|++||++||++|.|++.++|+.++ +.|++.++.++|++||++||++++|||||++|||||+.+
T Consensus 359 ~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyInaHGTGT~~g 438 (540)
T PLN02787 359 MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATSTKAG 438 (540)
T ss_pred cccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEEccCccCCCC
Confidence 999999999999999999999999999999999999987 556788899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--c-ccCcccccC
Q psy5222 316 DKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--F-SGKKSISIN 392 (415)
Q Consensus 316 d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~-v~~~~~~~~ 392 (415)
|..|..+|+++|+.. ..++|++.|+++||++||+|++++++++++|+++.|||++|+++| ++.++ + +..+.++++
T Consensus 439 D~~E~~Ai~~~Fg~~-~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~p-d~~~~~~~~v~~~~~~~~ 516 (540)
T PLN02787 439 DLKEYQALMRCFGQN-PELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENP-ESGVDTKVLVGPKKERLD 516 (540)
T ss_pred CHHHHHHHHHHhCCC-CCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCC-CccCCcccccccccccCC
Confidence 999999999999864 358999999999999999999999999999999999999999999 99876 3 434556677
Q ss_pred CCEEEEeccCcCCceeEEEEeeC
Q psy5222 393 INNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 393 ~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
.+++|+|||||||+|+++||++|
T Consensus 517 ir~aL~nSfGFGG~Naslvl~~~ 539 (540)
T PLN02787 517 IKVALSNSFGFGGHNSSILFAPY 539 (540)
T ss_pred cCEEEEeeecCCceeEEEEEEeC
Confidence 89999999999999999999986
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-74 Score=557.31 Aligned_cols=389 Identities=16% Similarity=0.269 Sum_probs=351.3
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.++++||++|++|++++++++.++.. .++.++++ ++++||+.+ .+++++.++|+++++|
T Consensus 8 ~G~vsp~G~~~~~~w~~L~~G~s~i~~~~~~~~~----~~~~~~~g--------~i~~~~~~~-~~~~~~~~~~d~~~~~ 74 (399)
T cd00832 8 IGVVAPNGLGVEEYWKAVLDGRSGLGPITRFDPS----GYPARLAG--------EVPDFDAAE-HLPGRLLPQTDRMTRL 74 (399)
T ss_pred eEEeCCCCCCHHHHHHHHHhCCCeEeeCCccccc----cCCCceeE--------EeCCcChhh-cCCHHHHhhCCHHHHH
Confidence 7999999999999999999999999998765444 45566666 777888877 8999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhh-hhcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPE-FLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
++.++++||+|||++++. +++.++||++|+..+.....+..+.. +..++..++|..++.++++.+++++++.||++|
T Consensus 75 ~l~aa~eAl~dAGl~~~~--~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~G 152 (399)
T cd00832 75 ALAAADWALADAGVDPAA--LPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRG 152 (399)
T ss_pred HHHHHHHHHHHcCCCccc--cCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCCC
Confidence 999999999999999888 88899999999655444333333333 345667788888889999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++++++|+|++.||..|+++|++|+ |.+||||+|..+++..+..|..++.++... +|...|||||.+++|+++|
T Consensus 153 p~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~---~p~~~~rPFd~~~~G~~~g 228 (399)
T cd00832 153 PSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSD---DPARAYLPFDAAAAGYVPG 228 (399)
T ss_pred CcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCC---CCCCCcCCCcCCCCCEeee
Confidence 999999999999999999999999999 999999999889999999999999988543 3678999999999999999
Q ss_pred ceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHH
Q psy5222 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIE 319 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E 319 (415)
||++++|||++++|++||++||++|.|++.++|+.+.. +...++.++|+++|+++|++++|||||++|||||+.+|..|
T Consensus 229 EGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~-~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E 307 (399)
T cd00832 229 EGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGS-GRPPGLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAE 307 (399)
T ss_pred ceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCC-CCHHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHH
Confidence 99999999999999999999999999999999988753 35889999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCCCEEE
Q psy5222 320 ISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISININNVM 397 (415)
Q Consensus 320 ~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~ 397 (415)
..+|+++|+.. .+|+++.|+++||+++|+|++++++++++|+++.+||++|++++ +|+++ +++.+.++++.++++
T Consensus 308 ~~al~~~fg~~--~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~-~p~~~l~~v~~~~~~~~~~~al 384 (399)
T cd00832 308 AAALAAVFGPR--GVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDV-PPAYGLDLVTGRPRPAALRTAL 384 (399)
T ss_pred HHHHHHHhCCC--CCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCC-CCCCCcccCCCcccCCCCCEEE
Confidence 99999999864 58999999999999999999999999999999999999999999 88765 777777777899999
Q ss_pred EeccCcCCceeEEEE
Q psy5222 398 SNSFGFSGINSSIIL 412 (415)
Q Consensus 398 v~s~g~gG~~~~~vl 412 (415)
+|||||||+|+++||
T Consensus 385 ~nsfgfGG~na~lvl 399 (399)
T cd00832 385 VLARGRGGFNSALVV 399 (399)
T ss_pred EeccCCCCcceEEEC
Confidence 999999999999986
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-73 Score=554.79 Aligned_cols=392 Identities=23% Similarity=0.313 Sum_probs=350.7
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.++++||++|++|+++|++++.++.. ..++.++++ .+++||.+. .+++++.|+|++.++|
T Consensus 9 ~g~vtp~G~~~~~~~~~L~~g~s~i~~~~~~~~~---~~~~~~~~~--------~v~~~~~~~-~~~~~~~r~~~~~~~~ 76 (405)
T PRK09116 9 MGGVTALGEDWQTIAARLKAGRNAVRRMPEWDRY---DGLNTRLAA--------PIDDFELPA-HYTRKKIRSMGRVSLM 76 (405)
T ss_pred eEEECCCCCCHHHHHHHHHcCCCCEEeCCchhhc---cCCCCceEE--------EecCcChhH-hcCHHHHhhCCHHHHH
Confidence 7999999999999999999999999999865321 156677888 777888776 6788899999999999
Q ss_pred HHHHHHHHHHhCCCCC-CCCCcCCCcEEEEEecCCChhhHHHhhhhhhh-cCCCCCCchhhcccccchHHHHHHHHhCCC
Q psy5222 81 SIIAALQAWYNSKLHK-KKYKILPERIGLIIAGHNTTQNYQYSLYPEFL-KKPEYLSPRYAIQFMDSNQIGIMSEIFNIR 158 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~-~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 158 (415)
++.++.+||+|||+.. .. .++.++||++|+..+.......+...+. .+...++|..++..++|.+++++++.||++
T Consensus 77 al~aa~~Al~dAGl~~~~~--~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~ 154 (405)
T PRK09116 77 ATRASELALEDAGLLGDPI--LTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLK 154 (405)
T ss_pred HHHHHHHHHHHcCCCCccc--cCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCC
Confidence 9999999999999854 33 5678999999966555444445555444 455668889999999999999999999999
Q ss_pred CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCccc
Q psy5222 159 GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIY 238 (415)
Q Consensus 159 Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~ 238 (415)
||+++++++|+|++.||..|+++|++|++|++||||+|. +++.....|..++.++... ..|...|||||.+++|+++
T Consensus 155 Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l~~~~~~~--~~~~~~~rPfd~~~~G~v~ 231 (405)
T PRK09116 155 GRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTLFATSTRN--DAPELTPRPFDANRDGLVI 231 (405)
T ss_pred CCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHhhhhccCC--CCCCCCCCCCcCCCCCEee
Confidence 999999999999999999999999999999999999994 7888888888887765432 1367789999999999999
Q ss_pred cceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHH
Q psy5222 239 GQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKI 318 (415)
Q Consensus 239 geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~ 318 (415)
|||++++|||++++|++||++||++|+|++.++|+.+...|+..++.++|+++|++++++++|||||++|||||+.+|..
T Consensus 232 gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~~~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~ 311 (405)
T PRK09116 232 GEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIA 311 (405)
T ss_pred eccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCCHHHHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHH
Confidence 99999999999999999999999999999999999888888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCC---CcccCcccccCCCE
Q psy5222 319 EISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA---NFSGKKSISININN 395 (415)
Q Consensus 319 E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~---~~v~~~~~~~~~~~ 395 (415)
|..+|+++|+. .+|+++.|+++||+++|+|++++++++++|++++|||++|++++ +|++ ++++.+.++++.++
T Consensus 312 E~~Ai~~~fg~---~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~-~~~~~~l~~v~~~~~~~~~~~ 387 (405)
T PRK09116 312 ESQATAAVFGA---RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQV-DPACGALDYIMGEAREIDTEY 387 (405)
T ss_pred HHHHHHHHhCC---CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCC-CCCCcccCccCCCCccCCCCE
Confidence 99999999985 48999999999999999999999999999999999999999999 9876 47888888888999
Q ss_pred EEEeccCcCCceeEEEEe
Q psy5222 396 VMSNSFGFSGINSSIILC 413 (415)
Q Consensus 396 ~~v~s~g~gG~~~~~vl~ 413 (415)
+++|||||||+|+++||+
T Consensus 388 ~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 388 VMSNNFAFGGINTSLIFK 405 (405)
T ss_pred EEEeeecCCcccEEEEEC
Confidence 999999999999999985
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-73 Score=561.13 Aligned_cols=405 Identities=26% Similarity=0.352 Sum_probs=355.7
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.++++||++|++|++++++++.+++. .++.++++..++..-+..+.||+++| +++++.++||++++|
T Consensus 11 ~g~~~p~g~~~~~~w~~l~~G~s~i~~~~~~~~~----~~~~~~~g~i~~~~~~~~~~fd~~~~-i~~~~~~~~d~~~~l 85 (424)
T PRK06333 11 MGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVG----DLATKIGGQVPDLAEDAEAGFDPDRY-LDPKDQRKMDRFILF 85 (424)
T ss_pred ceEECCCCCCHHHHHHHHHcCCCeEEeCCccccc----CCCCceEEEeccccccccccCChhHc-CCHHHHhhcCHHHHH
Confidence 6999999999999999999999999999987666 55666666110000001123888885 899999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCc-CCCcEEEEEecCCChhhHHHhhhhhh-hcCCCCCCchhhcccccchHHHHHHHHhCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKI-LPERIGLIIAGHNTTQNYQYSLYPEF-LKKPEYLSPRYAIQFMDSNQIGIMSEIFNIR 158 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~-~~~~~gv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 158 (415)
++.++++||+|+|+++++ + +..++||++|+..+...........+ ..+...++|..++..+.|.++++|++.||++
T Consensus 86 ~~~aa~~Al~dAgl~~~~--~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~ 163 (424)
T PRK06333 86 AMAAAKEALAQAGWDPDT--LEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGFK 163 (424)
T ss_pred HHHHHHHHHHhcCCCccc--cCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhCCC
Confidence 999999999999998887 6 77899999996544443333333333 4566778899999999999999999999999
Q ss_pred CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCccc
Q psy5222 159 GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIY 238 (415)
Q Consensus 159 Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~ 238 (415)
||+++++++|+||+.||..|+++|++|++|++||||+|..+++..+..|..++.++... ...|+..|+|||.+++|+++
T Consensus 164 Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~-~~~p~~~~~Pfd~~~~G~~~ 242 (424)
T PRK06333 164 GPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRF-NDAPEQASRPFDRDRDGFVM 242 (424)
T ss_pred CCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccC-CCCCCcCCCCCCCCCCCeEE
Confidence 99999999999999999999999999999999999999889999998999999887531 12467899999999999999
Q ss_pred cceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCC
Q psy5222 239 GQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGD 316 (415)
Q Consensus 239 geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d 316 (415)
|||++++|||++++|+++|++||++|.|++.++|+.+. +.|+..++.++|++||++||++++|||||++|||||+.+|
T Consensus 243 gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D 322 (424)
T PRK06333 243 GEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATSTPVGD 322 (424)
T ss_pred ecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccch
Confidence 99999999999999999999999999999999998877 4457889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC---cccCcccccCC
Q psy5222 317 KIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN---FSGKKSISINI 393 (415)
Q Consensus 317 ~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~---~v~~~~~~~~~ 393 (415)
..|..+++++|+.. .++++++.|+++||+++|||++++++++++|++++|||++|++++ +|.++ +++.+.++|+.
T Consensus 323 ~~E~~al~~~fg~~-~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~-~~~~~~~~~~~~~~~~~~~ 400 (424)
T PRK06333 323 LGEVAAIKKVFGHV-SGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENP-DPAAEGLDVVANKARPMDM 400 (424)
T ss_pred HHHHHHHHHHhCCC-CCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCC-CCCccccccccCCCcccCc
Confidence 99999999999843 368999999999999999999999999999999999999999999 88765 57778888999
Q ss_pred CEEEEeccCcCCceeEEEEeeC
Q psy5222 394 NNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 394 ~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++++|||||||+|+|+||++|
T Consensus 401 ~~al~~s~gfGG~n~~~il~~~ 422 (424)
T PRK06333 401 DYALSNGFGFGGVNASILFRRW 422 (424)
T ss_pred CEEEEeeecCCCeeEEEEEecc
Confidence 9999999999999999999976
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-73 Score=550.96 Aligned_cols=391 Identities=26% Similarity=0.365 Sum_probs=344.9
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.++++||++|++|+++|++++.++.. .+..++++ .+ +||++. .++++..+++++..++
T Consensus 9 ~G~vsp~G~~~~~~w~~l~~G~sgi~~~~~~~~~----~~~~~~~g--------~~-~~~~~~-~~~~~~~~~~~r~~~~ 74 (406)
T PRK07967 9 LGIVSSIGNNQQEVLASLREGRSGITFSPEFAEM----GMRSQVWG--------NV-KLDPTG-LIDRKVMRFMGDASAY 74 (406)
T ss_pred ceEECCCCCCHHHHHHHHHcCCCceeECCccccc----CCCCceEE--------Ec-CCChhh-cCCHHHhhcCCHHHHH
Confidence 7999999999999999999999999999877655 56677777 44 477766 5788888999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhh--cCCCCCCchhhcccccchHHHHHHHHhCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFL--KKPEYLSPRYAIQFMDSNQIGIMSEIFNIR 158 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 158 (415)
++.++.+||+|||+.+++ .+..++||++|+..+........+..+. .+.+.++|+.++..++|.++++|++.||++
T Consensus 75 a~~aa~~Al~dAGl~~~~--~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~ 152 (406)
T PRK07967 75 AYLAMEQAIADAGLSEEQ--VSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIK 152 (406)
T ss_pred HHHHHHHHHHHcCCCCcc--CCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCC
Confidence 999999999999998877 7888999999965544333222222222 456778999999999999999999999999
Q ss_pred CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCccc
Q psy5222 159 GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIY 238 (415)
Q Consensus 159 Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~ 238 (415)
||+++++++|+|++.||..|+++|++|++|++||||+|. +.+.....|..++.++.+.. .+|+..|||||.+++|+++
T Consensus 153 Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~-~~~~~~~~f~~~~~ls~~~~-~~p~~~~rPFd~~r~G~v~ 230 (406)
T PRK07967 153 GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LDWEMSCLFDAMGALSTKYN-DTPEKASRAYDANRDGFVI 230 (406)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecc-cChHHHHHHHHhhhhccCCC-CCCCcCCcCCcCCCCceee
Confidence 999999999999999999999999999999999999995 56666677999998875311 2477899999999999999
Q ss_pred cceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHH
Q psy5222 239 GQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKI 318 (415)
Q Consensus 239 geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~ 318 (415)
|||++++|||+.++|++||++||++|.|++.++|+.+.+.|+..++.++|++||+.++ + |||||++|||||+.+|..
T Consensus 231 gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p~~~~~~~a~~~Al~~~~--~-~Idyi~aHgtGT~~~D~~ 307 (406)
T PRK07967 231 AGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQMALATVD--T-PIDYINTHGTSTPVGDVK 307 (406)
T ss_pred eceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHhCCC--C-CccEEEcCCCCCCCCCHH
Confidence 9999999999999999999999999999999999999889999999999999998654 4 999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCC---CcccCcccccCCCE
Q psy5222 319 EISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA---NFSGKKSISININN 395 (415)
Q Consensus 319 E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~---~~v~~~~~~~~~~~ 395 (415)
|..||+++|+.. .++|++.|+++||+++|||++++++++++|++++|||++|++++ +|++ ++++.+.+..++++
T Consensus 308 E~~Ai~~~fg~~--~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 384 (406)
T PRK07967 308 ELGAIREVFGDK--SPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEEL-DPQAAGMPIVTETTDNAELTT 384 (406)
T ss_pred HHHHHHHHhCCC--CCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCC-CccccCCCccCCCCcCCCCCE
Confidence 999999999864 57999999999999999999999999999999999999999998 8865 36655555556899
Q ss_pred EEEeccCcCCceeEEEEeeC
Q psy5222 396 VMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 396 ~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++|||||||+|+|+||++|
T Consensus 385 ~l~~sfgfGG~n~~lvl~~~ 404 (406)
T PRK07967 385 VMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred EEEecccCCCeeEEEEEEec
Confidence 99999999999999999986
|
|
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-73 Score=553.05 Aligned_cols=395 Identities=29% Similarity=0.423 Sum_probs=358.6
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||++||+|.++++||++|++|+++|++++.++.. .++..+++ .+++||+.. .+++++.+++++..+|
T Consensus 9 ~g~vsp~G~~~~~~~~~L~~G~s~i~~~~~~~~~----~~~~~~~g--------~i~~f~~~~-~~~~~~~~~~~~~~~l 75 (406)
T PRK08439 9 IGMINSLGLNKESSFKAICNGECGIKKITLFDAS----DFPVQIAG--------EITDFDPTE-VMDPKEVKKADRFIQL 75 (406)
T ss_pred eEEECCCcCCHHHHHHHHHcCCCceEeCCCcccc----CCCCceeE--------EcCCcChhh-cCCHHHHhhcCHHHHH
Confidence 7999999999999999999999999999776555 55667777 778899888 4899999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCC-ChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHN-TTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
++.++++||+|||+++++ +++.++|+++|+.. +..............++..++|..++..++|.++++++..+|++|
T Consensus 76 ~~~Aa~~AL~dAGl~~~~--~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~G 153 (406)
T PRK08439 76 GLKAAREAMKDAGFLPEE--LDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKG 153 (406)
T ss_pred HHHHHHHHHHHcCCCccc--CCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCCC
Confidence 999999999999999888 88999999999554 333333233333346677889999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|++++.++|+|++.||..|+++|++|++|++||+|+|..+++..+..|..++.++..+. +|+..|+|||.+++|+++|
T Consensus 154 p~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~--~p~~~~rpfd~~~~G~v~g 231 (406)
T PRK08439 154 PNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRND--DPKKASRPFDKDRDGFVMG 231 (406)
T ss_pred CccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCC--CCccCcCCccCCCCcEEee
Confidence 99999999999999999999999999999999999998899999999999999985432 4778899999999999999
Q ss_pred ceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHH
Q psy5222 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIE 319 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E 319 (415)
||++++|||+.++|++||++||++|.|++.++|+.+...|+..++.++|+++|+++|+ +|||||++|||||+.+|..|
T Consensus 232 EGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~D~~E 309 (406)
T PRK08439 232 EGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGPLRAMKAALEMAGN--PKIDYINAHGTSTPYNDKNE 309 (406)
T ss_pred CceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCHHHHHHHHHHHHHHcCC--CccCEEEccCCcCCCCCHHH
Confidence 9999999999999999999999999999999999888888889999999999999998 79999999999999999999
Q ss_pred HHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCCCEEE
Q psy5222 320 ISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISININNVM 397 (415)
Q Consensus 320 ~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~ 397 (415)
..+|+++|+.....+++++.|+++||+++|||++++++++++|+++++||++|++++ +|+++ +++.+.++++.++++
T Consensus 310 ~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 388 (406)
T PRK08439 310 TAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETP-DPECDLDYIPNVARKAELNVVM 388 (406)
T ss_pred HHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCC-CCCCCcccCCCccccCCCCEEE
Confidence 999999998755567899999999999999999999999999999999999999999 88765 787777888899999
Q ss_pred EeccCcCCceeEEEEeeC
Q psy5222 398 SNSFGFSGINSSIILCKK 415 (415)
Q Consensus 398 v~s~g~gG~~~~~vl~~~ 415 (415)
+|||||||+|+|+||++|
T Consensus 389 ~nsfgfGG~n~~lvl~~~ 406 (406)
T PRK08439 389 SNSFGFGGTNGVVIFKKV 406 (406)
T ss_pred EeeecCCCceEEEEEecC
Confidence 999999999999999986
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-72 Score=548.33 Aligned_cols=394 Identities=23% Similarity=0.351 Sum_probs=344.8
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.++++||++|++|++++++++..+...+ .++.++++ ++ ..+||. .+++++.++|+|++++
T Consensus 19 ig~~sp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~--~~~~~~~g-----~i--~~~~d~---~~~~~~~~~~d~~~~~ 86 (418)
T PRK07910 19 IAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEF--DLPVRIGG-----HL--LEEFDH---QLTRVELRRMSYLQRM 86 (418)
T ss_pred eEEECCCCCCHHHHHHHHHcCCCeeEeCChhhhhcc--CCCcceEE-----Ee--ccCccc---cCCHHHHhhccHHHHH
Confidence 799999999999999999999999999876432211 34555666 22 125553 3688999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhh-hcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEF-LKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
++.++++||+|||+. . .++.++||++|+..+.......++..+ ..+...++|..++.+++|.++.++++.+|++|
T Consensus 87 ~l~aa~~AledAg~~--~--~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G 162 (418)
T PRK07910 87 STVLGRRVWENAGSP--E--VDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKA 162 (418)
T ss_pred HHHHHHHHHHHcCCC--C--CCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCC
Confidence 999999999999984 4 567899999996544443333333333 35566788889999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHccc-ccCCCCCCCCCCcccCCCCCCCCccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGA-MGGKNFYNFPKKTCRPFDKLAEGFIY 238 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~-ls~~~~~~~~~~~~~pfd~~~~G~~~ 238 (415)
|+++++++|+|++.||.+|+++|++|++|++||||+|..+++..+..|..++. ++..+ +.|++.|||||.+++|+++
T Consensus 163 ~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~--~~~~~~~rPFd~~~~G~v~ 240 (418)
T PRK07910 163 GVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNN--DDPAGACRPFDKDRDGFVF 240 (418)
T ss_pred CcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCC--CCCCCCcCCCcCCCCCEee
Confidence 99999999999999999999999999999999999998899999999999998 76432 1377899999999999999
Q ss_pred cceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCC
Q psy5222 239 GQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGD 316 (415)
Q Consensus 239 geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d 316 (415)
|||++++|||++++|+++|++|+++|+|++.++|+.+. +.|+..++.++|++||+++|++++|||||++|||||+.+|
T Consensus 241 gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D 320 (418)
T PRK07910 241 GEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGD 320 (418)
T ss_pred eceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCC
Confidence 99999999999999999999999999999999999887 6667888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCCC
Q psy5222 317 KIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISININ 394 (415)
Q Consensus 317 ~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~~ 394 (415)
..|..+|+++|+.. .+++++.|+++||+++|||++++++++++|+++++||++|++++ +|.++ +++.+..+.+.+
T Consensus 321 ~~E~~Al~~~fg~~--~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~-~p~~~l~~~~~~~~~~~~~ 397 (418)
T PRK07910 321 VAEGKAINNALGGH--RPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENL-DPEIDLDVVAGEPRPGNYR 397 (418)
T ss_pred HHHHHHHHHHhCCC--CCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCC-CCCCCcccCCCCCcCCCcc
Confidence 99999999999864 46799999999999999999999999999999999999999999 99876 565555556689
Q ss_pred EEEEeccCcCCceeEEEEeeC
Q psy5222 395 NVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 395 ~~~v~s~g~gG~~~~~vl~~~ 415 (415)
++++|||||||+|+++||+++
T Consensus 398 ~al~nsfGfGG~N~slvl~~~ 418 (418)
T PRK07910 398 YAINNSFGFGGHNVALAFGRY 418 (418)
T ss_pred EEEEeeecCCCeeEEEEEecC
Confidence 999999999999999999985
|
|
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-72 Score=551.10 Aligned_cols=397 Identities=31% Similarity=0.446 Sum_probs=357.2
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.++++||++|++|++++++++.++.. .+...+++ .+++||++.| +++++.++|+|+++|
T Consensus 9 ~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~----~~~~~~~g--------~i~~f~~~~~-~~~~~~~~~~~~~~l 75 (411)
T PRK07314 9 LGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTS----DLAVKIAG--------EVKDFNPDDY-MSRKEARRMDRFIQY 75 (411)
T ss_pred ceEECCCcCCHHHHHHHHHhCCCcEEECCccccc----CCCccEEE--------EeCCcChhhc-CCHHHhhcCCHHHHH
Confidence 7999999999999999999999999999876555 55666777 7889999884 899999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhh-hcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEF-LKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
++.++.+||+|||+++++ ++..++|+++|+..+......+++..+ ..++..+.|..++..+.|.++++++..||++|
T Consensus 76 ~~~aa~~Al~dAGl~~~~--~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~G 153 (411)
T PRK07314 76 GIAAAKQAVEDAGLEITE--ENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKG 153 (411)
T ss_pred HHHHHHHHHHHcCCCccc--CCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCCC
Confidence 999999999999999998 899999999996554443333444433 35567788888999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++++++|+|++.||..|+++|++|++|+|||||+|..+++..+..|..++.++... ..|+..++|||.+++|+++|
T Consensus 154 p~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~--~~p~~~~~pfd~~~dG~~~g 231 (411)
T PRK07314 154 PNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRN--DDPERASRPFDKDRDGFVMG 231 (411)
T ss_pred ccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCC--CCCCcCcCCCcCCCCCEeEE
Confidence 9999999999999999999999999999999999999888999999999999887532 23678899999999999999
Q ss_pred ceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCC--CCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH
Q psy5222 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHATASP--EPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~--~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~ 317 (415)
||++++||+++++|+++|++|+++|+|++.++++.+.. .+...++.++++++|+++|++++|||||++|||||+.+|.
T Consensus 232 eGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~ 311 (411)
T PRK07314 232 EGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGTSTPAGDK 311 (411)
T ss_pred ceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEccccCCccccH
Confidence 99999999999999999999999999999999987763 3456778999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCCCE
Q psy5222 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISININN 395 (415)
Q Consensus 318 ~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~~~ 395 (415)
.|..++.++|+....++++++.|+++||+++|||++++++++++|+++.|||++|+++| +++++ +++.+....+.++
T Consensus 312 ~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 390 (411)
T PRK07314 312 AETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNP-DEECDLDYVPNEARERKIDY 390 (411)
T ss_pred HHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCC-CCCCCccccCCcccCCCCCE
Confidence 99999999998755579999999999999999999999999999999999999999999 88765 6666677778899
Q ss_pred EEEeccCcCCceeEEEEeeC
Q psy5222 396 VMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 396 ~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++|||||||+|+|+||++|
T Consensus 391 al~~s~gfGG~n~~~vl~~~ 410 (411)
T PRK07314 391 ALSNSFGFGGTNASLVFKRY 410 (411)
T ss_pred EEEecccCCCceEEEEEecC
Confidence 99999999999999999986
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-70 Score=537.60 Aligned_cols=395 Identities=30% Similarity=0.451 Sum_probs=355.8
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.++++||++|++|++++++++.++.. +++.++++ .+++||++.| +++++.++|+++++|
T Consensus 8 ~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~----~~~~~~~g--------~i~~f~~~~~-~~~~~~~~~~~~~~l 74 (407)
T TIGR03150 8 LGAVTPLGNGVEEFWENLLAGKSGIGPITRFDAS----DLPVKIAG--------EVKDFDPEDY-IDKKEARRMDRFIQY 74 (407)
T ss_pred ceEECCCcCCHHHHHHHHHcCCCeeEECCccccc----CCCCcEEE--------EeCCcChhhc-CCHHHHhhcCHHHHH
Confidence 6999999999999999999999999999876555 56667777 7889999986 999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhh-hcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEF-LKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
++.++++||+|||+++++ ++..++|+++|+..+.....+.+...+ ..++..++|..++.++.|.++++++..||++|
T Consensus 75 ~~~aa~~Al~dAgl~~~~--~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~g 152 (407)
T TIGR03150 75 ALAAAKEAVEDSGLDIEE--EDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKG 152 (407)
T ss_pred HHHHHHHHHHhcCCCccc--CCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCCCC
Confidence 999999999999999999 999999999996554433333333333 35666788888999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++++++|+|++.||..|+++|++|++|.+||||+|..+++..+..|...+.++..+. .+...++|||.+++|+++|
T Consensus 153 ~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~--~~~~~~~pfd~~~~g~~~g 230 (407)
T TIGR03150 153 PNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRND--DPEKASRPFDKDRDGFVMG 230 (407)
T ss_pred cccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCC--CCCcCCCCCcCCCCcEEEe
Confidence 99999999999999999999999999999999999998899999999999888875331 3566799999999999999
Q ss_pred ceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCC--CCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH
Q psy5222 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHATASP--EPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~--~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~ 317 (415)
||++++||+++++|+++|++++++|+|++.++++.+.. .+...++.++++++|++||++++||||||+|++||+.+|.
T Consensus 231 EGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~ 310 (407)
T TIGR03150 231 EGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLGDK 310 (407)
T ss_pred ceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCH
Confidence 99999999999999999999999999999999887763 4457789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCCCE
Q psy5222 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISININN 395 (415)
Q Consensus 318 ~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~~~ 395 (415)
.|..++.++|+....++++++.|+++||+++|||++++++++++|++++|||++|+++| ++.++ +++.+..+++.++
T Consensus 311 ~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~-~~~~~~~~v~~~~~~~~~~~ 389 (407)
T TIGR03150 311 AETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNP-DPECDLDYVPNEARERKIDY 389 (407)
T ss_pred HHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCC-CCCCCccccCCCCccCCcCE
Confidence 99999999998765579999999999999999999999999999999999999999999 88876 6777778888999
Q ss_pred EEEeccCcCCceeEEEEe
Q psy5222 396 VMSNSFGFSGINSSIILC 413 (415)
Q Consensus 396 ~~v~s~g~gG~~~~~vl~ 413 (415)
+++|||||||+|+|+||+
T Consensus 390 ~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 390 ALSNSFGFGGHNASLVFK 407 (407)
T ss_pred EEEecccCCCceEEEEeC
Confidence 999999999999999984
|
FabB sequences should fall well below the noise cutoff of this model. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-71 Score=618.00 Aligned_cols=398 Identities=16% Similarity=0.237 Sum_probs=350.9
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCcccc--ccCCc-------cccccccccccccCCCCCCCCccCCCCCHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQS--NFSKN-------IIAKINNFNFKNSLNKITDLSEKKKEFILHIA 71 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~--~~~~~-------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 71 (415)
|||++|.|.++++||++|.+|+++|+++|..+|+ +|++. .+.+.++ |++++ +||+.+|++++++.
T Consensus 14 mg~~~P~a~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~gg-----fl~~v-~FD~~~F~i~p~ea 87 (2582)
T TIGR02813 14 MASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGG-----FLPEV-DFNPMEFGLPPNIL 87 (2582)
T ss_pred eeeeCCCCCCHHHHHHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeE-----ecCcc-CCCHhhcCCCHHHH
Confidence 7999999999999999999999999999876554 34432 2344555 77776 69999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhH-------HHhh--------------hhh----
Q psy5222 72 QKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNY-------QYSL--------------YPE---- 126 (415)
Q Consensus 72 ~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~-------~~~~--------------~~~---- 126 (415)
+.|||+++|+++++++||+|||+.. . .++.++|||+|...+.... .... ...
T Consensus 88 ~~mDpqqrl~L~~a~eALedAG~~~-~--~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (2582)
T TIGR02813 88 ELTDISQLLSLVVAKEVLNDAGLPD-G--YDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKK 164 (2582)
T ss_pred HhcCHHHHHHHHHHHHHHHhCCCCC-C--CCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhhh
Confidence 9999999999999999999999964 4 6789999999954432110 0000 000
Q ss_pred hhcCCCCCCchhhcccccchHHHHHHHHhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHH
Q psy5222 127 FLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQA 206 (415)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~ 206 (415)
+......+.+..+++.+.|.++++|++.||++||+++|+++|+||+.||++|+++|++|+||++||||++...++..+..
T Consensus 165 ~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~ 244 (2582)
T TIGR02813 165 FQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMS 244 (2582)
T ss_pred hcccccccCccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHH
Confidence 11111235666788999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred HHHcccccCCCCCCCCCCcccCCCCCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCC--CCCCCHHHH
Q psy5222 207 FHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATA--SPEPNLNNE 284 (415)
Q Consensus 207 ~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~--~~~~~~~~~ 284 (415)
|.+.+.++ +++.|||||.+++|+++|||++++|||+.++|+++|++||++|+|++.++||.. ++.|+..++
T Consensus 245 fs~~~~lS-------~~g~crpFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq 317 (2582)
T TIGR02813 245 FSKTPAFT-------TNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQ 317 (2582)
T ss_pred HHhccCcC-------CCCCccCCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHH
Confidence 99999998 667899999999999999999999999999999999999999999999999974 489999999
Q ss_pred HHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCC---CceeeeecccccchhHhhHHHHHHHHHHHH
Q psy5222 285 ISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHF---SKLLLNSTKSLTGHCLYSSGIVEIIASVIQ 361 (415)
Q Consensus 285 ~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~---~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~ 361 (415)
.++|++||++||++++||+|||+|||||+.+|.+|..+|.++|+... .+++|+|+|+++||+++|||+.++++++++
T Consensus 318 ~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~la 397 (2582)
T TIGR02813 318 AKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLA 397 (2582)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998642 468999999999999999999999999999
Q ss_pred hhcCccCCCCCCCCCCCCCCC------cccCcccccC------CCEEEEeccCcCCceeEEEEeeC
Q psy5222 362 MRKKFIHPNLNLESPIDNQAN------FSGKKSISIN------INNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 362 l~~~~ip~~~~~~~~~~~~~~------~v~~~~~~~~------~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
|+++++||++|+++| +|.++ +++++.++|+ +++++||||||||+|+|+||++|
T Consensus 398 l~~~~iPp~~~~~~p-np~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 398 LHHKVLPPTINVDQP-NPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred HhcCCcCCCCCCCCC-CCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 999999999999999 99876 5777788883 58999999999999999999985
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-70 Score=533.61 Aligned_cols=398 Identities=38% Similarity=0.687 Sum_probs=348.6
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCcccc--cc--CCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQS--NF--SKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPL 76 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 76 (415)
||+++|+|.++++||++|++|++++++++.++.. +. .+....++++ ++++|++.. .++++..|++++
T Consensus 9 ~g~vsp~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~r~~~~ 79 (410)
T PRK07103 9 VGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGA--------ELDSLALPE-RLDAKLLRRASL 79 (410)
T ss_pred ceEECCCcCCHHHHHHHHHcCCCeEecCCcccccccccccccCCCceEEE--------EeCCCChhh-cCCHHHhhcCCH
Confidence 7999999999999999999999999999875421 00 0022344556 666777666 678888999999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..+|++.++++||+|||++ . .++.++||++|+..+.......++..+..++..+.|.+....+++.+++++++.||
T Consensus 80 ~~~lal~Aa~eAl~dAgl~--~--~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 155 (410)
T PRK07103 80 SAQAALAAAREAWRDAALG--P--VDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFG 155 (410)
T ss_pred HHHHHHHHHHHHHHhcCcC--C--CCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhC
Confidence 9999999999999999994 4 56789999999655544444455555555666778888888888999999999999
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCc
Q psy5222 157 IRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGF 236 (415)
Q Consensus 157 l~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~ 236 (415)
++||+++++++|+|++.||..|+++|++|++|.|||+|++..+++..+..|..++.++......+|...|+|||.+++|+
T Consensus 156 l~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~dG~ 235 (410)
T PRK07103 156 IRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGF 235 (410)
T ss_pred CCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCCCe
Confidence 99999999999999999999999999999999999999987899999999999998875422234778999999999999
Q ss_pred cccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCC
Q psy5222 237 IYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGD 316 (415)
Q Consensus 237 ~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d 316 (415)
++|||++++|||+.++|+++|++||++|.|++.++++.+...|+..++.+++++||++||++++|||||++|||||+.+|
T Consensus 236 v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt~~~D 315 (410)
T PRK07103 236 IYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSPLGD 315 (410)
T ss_pred eEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCCCCC
Confidence 99999999999999999999999999999999999998888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEE
Q psy5222 317 KIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNV 396 (415)
Q Consensus 317 ~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 396 (415)
..|..+| ++....++||++.|+++||+++|||++++++++++|++++|||++|+++|.++++++++.+..+.+.+++
T Consensus 316 ~~E~~al---~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~v~~~~~~~~~~~~ 392 (410)
T PRK07103 316 ETELAAL---FASGLAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRWVGSTAESARIRYA 392 (410)
T ss_pred HHHHHHH---hcCCCCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcCccCCCCcCCCCCEE
Confidence 9999999 3333346899999999999999999999999999999999999999998756788888877777778999
Q ss_pred EEeccCcCCceeEEEEee
Q psy5222 397 MSNSFGFSGINSSIILCK 414 (415)
Q Consensus 397 ~v~s~g~gG~~~~~vl~~ 414 (415)
++|||||||+|+|+||++
T Consensus 393 l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 393 LSLSFGFGGINTALVLER 410 (410)
T ss_pred EEecccCCCceEEEEEeC
Confidence 999999999999999985
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-70 Score=536.77 Aligned_cols=397 Identities=26% Similarity=0.383 Sum_probs=342.4
Q ss_pred EEeCcCCCHHHHHHHHHcCCCceeeCCCcccc--cc----------CCccccccccccccccCCCCC--CCCccCCCCCH
Q psy5222 3 IVSSIGFDIASFSNSLIKGKSGIDYEINNTQS--NF----------SKNIIAKINNFNFKNSLNKIT--DLSEKKKEFIL 68 (415)
Q Consensus 3 ~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~--~~----------~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~ 68 (415)
+|||+|.++++||++|++|++++++++.+++. .+ ...++.++++ .++ +||++.|...+
T Consensus 1 ~vs~~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------~i~~~~f~~~~~~~~~ 72 (421)
T PTZ00050 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAA--------EVDQSEFDPSDFAPTK 72 (421)
T ss_pred CCCCCcCCHHHHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEE--------ECCcccCChhHcCCcc
Confidence 48999999999999999999999999877521 00 1134455555 444 68877654333
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHhCCCC-CCCCCcCCCcEEEEEecCCChhhHHHhhhhhh-hcCCCCCCchhhcccccch
Q psy5222 69 HIAQKSPLFIQTSIIAALQAWYNSKLH-KKKYKILPERIGLIIAGHNTTQNYQYSLYPEF-LKKPEYLSPRYAIQFMDSN 146 (415)
Q Consensus 69 ~~~~~~~~~~~l~~~a~~~Al~dag~~-~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 146 (415)
+.++.++|++.++++||+|||++ +++ ++..++|+++|+..+.......++..+ ..+...++|..++..+.|.
T Consensus 73 ----~~~~~~~l~~~aa~~Al~dAGl~~~~~--~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 146 (421)
T PTZ00050 73 ----RESRATHFAMAAAREALADAKLDILSE--KDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNM 146 (421)
T ss_pred ----cCCHHHHHHHHHHHHHHHHcCCCcccc--cCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhH
Confidence 45899999999999999999998 777 888999999996554443333333333 3566778899999999999
Q ss_pred HHHHHHHHhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcc
Q psy5222 147 QIGIMSEIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTC 226 (415)
Q Consensus 147 ~a~~ia~~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~ 226 (415)
++++|++.||++||+++|+++|+||+.||..|+++|++|++|++||||+|..+++..+..|..++.++... ..+|+..|
T Consensus 147 ~a~~is~~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~-~~~p~~~~ 225 (421)
T PTZ00050 147 AAGLVAIKHKLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKY-NDDPQRAS 225 (421)
T ss_pred HHHHHHHHhCCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCc-CCCCCccC
Confidence 99999999999999999999999999999999999999999999999999878999999999998887431 12367789
Q ss_pred cCCCCCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHH-cCCCCCccc
Q psy5222 227 RPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQ-SGLKKNMID 303 (415)
Q Consensus 227 ~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~-Agl~~~dId 303 (415)
+|||.+++|+++||||+++|||++++|+++|++||++|+|++.++|+.+. +.|+..++.++|++||++ ||++++|||
T Consensus 226 ~pfd~~~~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId 305 (421)
T PTZ00050 226 RPFDKDRAGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVD 305 (421)
T ss_pred CCCcCCCCCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCC
Confidence 99999999999999999999999999999999999999999999998777 456788999999999999 999999999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHHhcCC-CceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC
Q psy5222 304 YLNTHGSSSPLGDKIEISAIKEVYKNHF-SKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN 382 (415)
Q Consensus 304 ~v~~h~~gt~~~d~~E~~al~~~~~~~~-~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~ 382 (415)
|||+|||||+.+|..|..++.++|+... +++++++.|+++||+++|||++++++++++|++++|||++|++++ +++++
T Consensus 306 ~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~-~~~~~ 384 (421)
T PTZ00050 306 YVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENP-DAECD 384 (421)
T ss_pred EEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCC-CCCCC
Confidence 9999999999999999999999998653 579999999999999999999999999999999999999999999 88766
Q ss_pred --cccCcccc--cCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 383 --FSGKKSIS--ININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 383 --~v~~~~~~--~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++.+... .+.+++++|||||||+|+|+||+++
T Consensus 385 l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~~ 421 (421)
T PTZ00050 385 LNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTKY 421 (421)
T ss_pred ccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeCC
Confidence 55544332 1469999999999999999999985
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-69 Score=533.19 Aligned_cols=405 Identities=27% Similarity=0.373 Sum_probs=341.4
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCcccc--cc--------CCccccccccccccccCCCCCCCCccCCCCCHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQS--NF--------SKNIIAKINNFNFKNSLNKITDLSEKKKEFILHI 70 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 70 (415)
||+++|+|.++++||++|++|++++++++.+++. .| ...++.++++..+ ....+.+||+.+|..
T Consensus 13 ~g~~~p~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~fd~~~~~~---- 86 (437)
T PLN02836 13 LGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVP--RGTGPGDFDEELWLN---- 86 (437)
T ss_pred eeEECCCCCCHHHHHHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEec--cccccccCChHHhcc----
Confidence 7999999999999999999999999999887542 11 1234445555110 001234788776433
Q ss_pred HhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCCh-hhHHHhhhhhhhcCCCCCCchhhcccccchHHH
Q psy5222 71 AQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTT-QNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIG 149 (415)
Q Consensus 71 ~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 149 (415)
.+++++..+|++.++.+||+|||+.+.+. .+..++||++|+..+. .+..+.+......+...++|+.++.+++|++++
T Consensus 87 ~~~~~~~~~~~~~aa~~Al~dAg~~~~~~-~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~ 165 (437)
T PLN02836 87 SRSSSRFIGYALCAADEALSDARWLPSED-EAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAG 165 (437)
T ss_pred ccccCHHHHHHHHHHHHHHHHcCCCcccc-cCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHH
Confidence 35789999999999999999999976430 3568999999955433 333322222233456678999999999999999
Q ss_pred HHHHHhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCC
Q psy5222 150 IMSEIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPF 229 (415)
Q Consensus 150 ~ia~~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pf 229 (415)
+|++.||++||+++|+++|+|++.||..|+++|++|++|+|||||+|..+++..+..|..++.++.... ..|+..|+||
T Consensus 166 ~is~~~gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~-~~p~~~~~pf 244 (437)
T PLN02836 166 HVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFN-SCPTEASRPF 244 (437)
T ss_pred HHHHHhCCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccC-CCcccccCCc
Confidence 999999999999999999999999999999999999999999999998889999999998888774321 2366789999
Q ss_pred CCCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCcccEEEe
Q psy5222 230 DKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEP--NLNNEISVMNSVLKQSGLKKNMIDYLNT 307 (415)
Q Consensus 230 d~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~--~~~~~~~~~~~aL~~Agl~~~dId~v~~ 307 (415)
|.+++|+++|||++++|||++++|+++|+++|++|+|++.++++.+...| +..+..+++++||++||++++|||||++
T Consensus 245 d~~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ve~ 324 (437)
T PLN02836 245 DCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNA 324 (437)
T ss_pred ccCCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCEEEc
Confidence 99999999999999999999999999999999999999999998887544 5677889999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHhcCC--CceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--c
Q psy5222 308 HGSSSPLGDKIEISAIKEVYKNHF--SKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--F 383 (415)
Q Consensus 308 h~~gt~~~d~~E~~al~~~~~~~~--~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~ 383 (415)
|||||+.+|..|..++.++|+... ..+++++.|+++||+++|||++++++++++|++++|||++|+++| +|.++ +
T Consensus 325 hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~-~p~~~~~~ 403 (437)
T PLN02836 325 HATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERP-DPIFDDGF 403 (437)
T ss_pred cCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCC-CCCCCccc
Confidence 999999999999999999998643 258999999999999999999999999999999999999999999 99876 4
Q ss_pred ccCc-ccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 384 SGKK-SISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 384 v~~~-~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
++.. ....+.+++++|||||||+|+|+||++
T Consensus 404 ~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~ 435 (437)
T PLN02836 404 VPLTASKAMLIRAALSNSFGFGGTNASLLFTS 435 (437)
T ss_pred CcccCCCCCCccEEEEecccCCCeeEEEEEec
Confidence 5433 234468999999999999999999986
|
|
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-70 Score=578.72 Aligned_cols=394 Identities=19% Similarity=0.281 Sum_probs=358.1
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCcccc--ccCCcc-------ccccccccccccCCCCCCCCccCCCCCHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQS--NFSKNI-------IAKINNFNFKNSLNKITDLSEKKKEFILHIA 71 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 71 (415)
|+|++|...+.++||++|.+|+++|+++|..+|+ .|+.+. ..+.++ |++++++||+.+|+|+|++.
T Consensus 11 m~~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~gg-----fl~~~~~FD~~fFgisPrEA 85 (1061)
T COG3321 11 MACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGG-----FLDDVDDFDALFFGISPREA 85 (1061)
T ss_pred ccccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCcccccccccccccc-----ccCCccccCHHHcCCCHHHH
Confidence 7899999999999999999999999999998744 444432 345555 89999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHH
Q psy5222 72 QKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIM 151 (415)
Q Consensus 72 ~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 151 (415)
..||||++|.++.+++||+|||+.+.. +....+|||+|.+.... ............++....+..+.+++++
T Consensus 86 ~~mDPQqRllLe~aw~AlEdAG~~~~~--l~g~~tgV~~g~~~~~y------~~~~~~~~~~~~~~~~~g~~~~~~a~Ri 157 (1061)
T COG3321 86 EAMDPQQRLLLEVAWEALEDAGIYPDS--LRGSATGVFAGASVADY------LLLLLADDEAEPEYAITGNSSSVAAGRI 157 (1061)
T ss_pred HhcCchHhHHHHHHHHHHHHcCCCccc--cCCcceEEEEeeccCcc------ccccccccccccceecccchhhHHHHHH
Confidence 999999999999999999999999999 88899999999443211 1111111113455566667788999999
Q ss_pred HHHhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCC
Q psy5222 152 SEIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDK 231 (415)
Q Consensus 152 a~~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~ 231 (415)
|+.|+++||+++|+++|+|++.|+++|++.|+.|+||++|+||++...++.....|.+.++++ ++++|++||.
T Consensus 158 sy~l~l~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls-------~~g~c~~fd~ 230 (1061)
T COG3321 158 SYVLGLSGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLS-------PDGRCKAFDA 230 (1061)
T ss_pred HHHhcCCCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcC-------CCCcceeccc
Confidence 999999999999999999999999999999999999999999999999999999999999998 8889999999
Q ss_pred CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecC
Q psy5222 232 LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHG 309 (415)
Q Consensus 232 ~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~ 309 (415)
+.||+++|||++++||++.++|.++|++||++|+|.+.++||... +.|+..++..++++||+++|++|.+|+|||+||
T Consensus 231 ~adG~v~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHg 310 (1061)
T COG3321 231 DADGYVRGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHG 310 (1061)
T ss_pred CCCCEEEeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecC
Confidence 999999999999999999999999999999999999999999666 899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhcC--CCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC-----
Q psy5222 310 SSSPLGDKIEISAIKEVYKNH--FSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN----- 382 (415)
Q Consensus 310 ~gt~~~d~~E~~al~~~~~~~--~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~----- 382 (415)
|||+.+|.+|..+|.++|+.. ..++.++|.|+++||+..|+|+.+++|++++|+|+++||++|+++| +|.++
T Consensus 311 TGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~-np~i~~~~sp 389 (1061)
T COG3321 311 TGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTP-NPEIDFDSSP 389 (1061)
T ss_pred CCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCC-CcCCccccCC
Confidence 999999999999999999865 4578999999999999999999999999999999999999999999 99987
Q ss_pred -cccCcccccC----CCEEEEeccCcCCceeEEEEeeC
Q psy5222 383 -FSGKKSISIN----INNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 383 -~v~~~~~~~~----~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+|+++.++|+ ++++.|+||||||+|+|+|||+|
T Consensus 390 ~~v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~ 427 (1061)
T COG3321 390 FVVPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEA 427 (1061)
T ss_pred eEeecCCcCCCCCCCCceeeeeccCCCCCceEEEEeec
Confidence 7888889885 78999999999999999999975
|
|
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-68 Score=523.69 Aligned_cols=394 Identities=29% Similarity=0.466 Sum_probs=356.5
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|.|.+.++||++|++|++++++++.++.. .+...+++ .+++|+++ |.+++++.++|+++++|
T Consensus 8 ~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~----~~~~~~~~--------~i~~~~~~-~~~~~~~~~~~~~~~~l 74 (406)
T cd00834 8 LGAVTPLGNGVEEFWEALLAGRSGIRPITRFDAS----GFPSRIAG--------EVPDFDPE-DYLDRKELRRMDRFAQF 74 (406)
T ss_pred cceeCCCcCCHHHHHHHHHcCCCeeEECCccccc----CCCccEEE--------EcCCCChh-hcCCHHHhccCCHHHHH
Confidence 6899999999999999999999999999877655 56677777 77888887 59999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhh-hcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEF-LKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
++.++++||+|||+++++ +++.++|+++|+..+.......++..+ ..++..++|..++..+.+.++++++..||++|
T Consensus 75 ~~~aa~~AL~dAgl~~~~--~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g 152 (406)
T cd00834 75 ALAAAEEALADAGLDPEE--LDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRG 152 (406)
T ss_pred HHHHHHHHHHHcCCCccc--CCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCCCC
Confidence 999999999999999999 899999999996655444433444443 45666789999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++++++|+|++.||..|+++|++|++|.+||+|+|....+..+..|..++.++.... .|.+.++|||.+++|+++|
T Consensus 153 ~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~--~p~~~~~pf~~~~~g~~~g 230 (406)
T cd00834 153 PNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRND--DPEKASRPFDKDRDGFVLG 230 (406)
T ss_pred cccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCC--CCccCCCCCCCCCCCEeee
Confidence 99999999999999999999999999999999999998777999999999999885432 2566899999999999999
Q ss_pred ceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCC--CCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH
Q psy5222 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHATASP--EPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~--~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~ 317 (415)
|||+++||++.++|+++|++++++|+|++.++++.+.. .|...++.++++++|+++|++++|||||++|++||+.+|.
T Consensus 231 eGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~ 310 (406)
T cd00834 231 EGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDA 310 (406)
T ss_pred ccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccccCccccH
Confidence 99999999999999999999999999999999987763 4458899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCC--CcccCcccccCCCE
Q psy5222 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA--NFSGKKSISININN 395 (415)
Q Consensus 318 ~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~--~~v~~~~~~~~~~~ 395 (415)
.|.+++.++|+...+++++++.|+++||+++|||++++++++++|+++++||++|+++| ++.. ++++.+.++|+.++
T Consensus 311 ~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 389 (406)
T cd00834 311 AESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEP-DPECDLDYVPNEAREAPIRY 389 (406)
T ss_pred HHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCC-CCCCCccccCCCCccccccE
Confidence 99999999998755579999999999999999999999999999999999999999999 8754 47777889999999
Q ss_pred EEEeccCcCCceeEEEE
Q psy5222 396 VMSNSFGFSGINSSIIL 412 (415)
Q Consensus 396 ~~v~s~g~gG~~~~~vl 412 (415)
+++|||||||+|+|+||
T Consensus 390 ~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 390 ALSNSFGFGGHNASLVF 406 (406)
T ss_pred EEEeeecCCceeeEEEC
Confidence 99999999999999996
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-67 Score=516.47 Aligned_cols=386 Identities=20% Similarity=0.284 Sum_probs=342.0
Q ss_pred CEEEeCcCCC---HHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcC---
Q psy5222 1 MGIVSSIGFD---IASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKS--- 74 (415)
Q Consensus 1 ~G~v~p~g~~---~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--- 74 (415)
||+++|.|.+ +++||++|++|++++++++.++ . .++..+++ ++++|+ ++++..+++
T Consensus 8 ~g~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~-~----~~~~~~~g--------~i~~~~-----~~~~~~~~~~~~ 69 (407)
T cd00828 8 IGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK-S----RFDRGVAG--------QIPTGD-----IPGWDAKRTGIV 69 (407)
T ss_pred ceeecCCCCCCCCHHHHHHHHHcCCCceeeCCccc-c----cCCccEEE--------EccCCC-----cCHHHHHhccCC
Confidence 7999999999 9999999999999999998766 3 55667777 666665 677788888
Q ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhccccc--chHHHHHH
Q psy5222 75 PLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMD--SNQIGIMS 152 (415)
Q Consensus 75 ~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~ia 152 (415)
+++++|++.++++||+|||+++++. +++.++|+++|+..+.....+....... +..+|..++..+. |.++++++
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~-~~~~~~gv~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~is 145 (407)
T cd00828 70 DRTTLLALVATEEALADAGITDPYE-VHPSEVGVVVGSGMGGLRFLRRGGKLDA---RAVNPYVSPKWMLSPNTVAGWVN 145 (407)
T ss_pred CHHHHHHHHHHHHHHHhCCCCcccc-CCccCeEEEEeeccCCHHHHHHHHHHHh---hccCCcccchhccccchHHHHHH
Confidence 9999999999999999999976431 3578999999976655554444433332 3456778888887 99999999
Q ss_pred HHhCC-CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCC
Q psy5222 153 EIFNI-RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDK 231 (415)
Q Consensus 153 ~~lgl-~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~ 231 (415)
+.||+ +||+++++++|+|++.||..|+++|++|++|.|||||+|... +..+..|..++.++.... .|...|+|||.
T Consensus 146 ~~~gl~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~~~~~ls~~~~--~~~~~~~pfd~ 222 (407)
T cd00828 146 ILLLSSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFANMGALSTAEE--EPEEMSRPFDE 222 (407)
T ss_pred HHhCcCCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHHHcCCCCCCCC--CCCcccCCCcC
Confidence 99999 999999999999999999999999999999999999999766 888999999999885431 25578999999
Q ss_pred CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCC-CHHHHHHHHHHHHHHcCCCCCcccEEEecCC
Q psy5222 232 LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEP-NLNNEISVMNSVLKQSGLKKNMIDYLNTHGS 310 (415)
Q Consensus 232 ~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~-~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~ 310 (415)
+++|+++||||+++|||++++|+++|++||++|.|++.++++.+...+ +..++.++|+++|++||++++|||||++|+|
T Consensus 223 ~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~a~~~Al~~Agi~~~dId~i~~hgt 302 (407)
T cd00828 223 TRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTALAKAGLSLDDLDVISAHGT 302 (407)
T ss_pred CCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEecccc
Confidence 999999999999999999999999999999999999999998877333 7889999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcc
Q psy5222 311 SSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKS 388 (415)
Q Consensus 311 gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~ 388 (415)
||+.+|..|..+++++|+....++++++.|+++||+++|||++++++++++|+++.+||++|++++ +|+++ +++.+.
T Consensus 303 gt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~-~~~~~~~~~~~~~ 381 (407)
T cd00828 303 STPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDV-DPDVEHLSVVGLS 381 (407)
T ss_pred cCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCC-CcccccccccCcC
Confidence 999999999999999998755578999999999999999999999999999999999999999999 98875 777788
Q ss_pred cccCC--CEEEEeccCcCCceeEEEE
Q psy5222 389 ISINI--NNVMSNSFGFSGINSSIIL 412 (415)
Q Consensus 389 ~~~~~--~~~~v~s~g~gG~~~~~vl 412 (415)
++|+. +.+++|||||||+|+|+||
T Consensus 382 ~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 382 RDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred ccCCCCccEEEEecccCCCcceEEEC
Confidence 88884 9999999999999999986
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-67 Score=505.14 Aligned_cols=367 Identities=24% Similarity=0.377 Sum_probs=317.4
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||++||+|. +++||++|++|+++|++++.++.. +.+.... + .++ + ..++ ++
T Consensus 9 ~G~vsp~G~-~~~~~~~l~~G~sgi~~~~~~~~~---~~~~~~~-----------~-~~~-------~---~~~~---~~ 59 (381)
T PRK05952 9 IGLVSALGD-LEQSWQRLLQGKSGIKLHQPFPEL---PPLPLGL-----------I-GNQ-------P---SSLE---DL 59 (381)
T ss_pred eEEECcccC-HHHHHHHHHcCCCCeEeCCccccc---cccccee-----------e-ccc-------c---cccc---HH
Confidence 699999999 999999999999999988765311 0111110 0 000 0 1233 35
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhc-CC---CCCCchhhcccccchHHHHHHHHhC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLK-KP---EYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
+..++++||+|+|++.+ ..++||++|+..+.....+++...+.. +. ..+.|..++++++|.+++++++.||
T Consensus 60 ~~~a~~~Al~dagl~~~-----~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~ 134 (381)
T PRK05952 60 TKTVVTAALKDAGLTPP-----LTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIG 134 (381)
T ss_pred HHHHHHHHHHhcCCCCC-----CCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhC
Confidence 56889999999998642 368999999665555444455554443 22 3578889999999999999999999
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCc
Q psy5222 157 IRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGF 236 (415)
Q Consensus 157 l~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~ 236 (415)
++||+++++++|+|++.||..|+++|++|++|.+||||+|..+++..+..|..++.++. ..|+|||.+++|+
T Consensus 135 ~~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~--------~~~rPfd~~r~G~ 206 (381)
T PRK05952 135 TQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAK--------TGAYPFDRQREGL 206 (381)
T ss_pred CCCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCC--------CCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999998899999999999999873 2599999999999
Q ss_pred cccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCC
Q psy5222 237 IYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPL 314 (415)
Q Consensus 237 ~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~ 314 (415)
++|||++++|||++++|+++|++||++|.|++.++|+.+. +.|+...+.++++++|+++|++++|||||++|||||+.
T Consensus 207 v~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~ 286 (381)
T PRK05952 207 VLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRL 286 (381)
T ss_pred cccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCC
Confidence 9999999999999999999999999999999999999887 55678889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCC
Q psy5222 315 GDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININ 394 (415)
Q Consensus 315 ~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~ 394 (415)
+|..|..+|+++|+. .+++++.|+++||+++|||++++++++++|++++|||++|+++| ++++++++ ++++.+.+
T Consensus 287 ~D~~E~~al~~~fg~---~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~-~~~~~~v~-~~~~~~~~ 361 (381)
T PRK05952 287 NDQREANLIQALFPH---RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEP-EFDLNFVR-QAQQSPLQ 361 (381)
T ss_pred CcHHHHHHHHHHcCC---CCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCC-CCCCCcCC-CcccCCCC
Confidence 999999999999975 48999999999999999999999999999999999999999998 88888775 46666789
Q ss_pred EEEEeccCcCCceeEEEEee
Q psy5222 395 NVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 395 ~~~v~s~g~gG~~~~~vl~~ 414 (415)
++++|||||||+|+++||++
T Consensus 362 ~~l~~s~gfGG~na~lvl~~ 381 (381)
T PRK05952 362 NVLCLSFGFGGQNAAIALGK 381 (381)
T ss_pred EEEEeeecCCCeeEEEEEeC
Confidence 99999999999999999985
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-67 Score=493.51 Aligned_cols=334 Identities=27% Similarity=0.346 Sum_probs=302.0
Q ss_pred CCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhh-hhcCCCCCCchhhcccccchHHHHHH
Q psy5222 74 SPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPE-FLKKPEYLSPRYAIQFMDSNQIGIMS 152 (415)
Q Consensus 74 ~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~ia 152 (415)
+++.++|++.++++|++|||+. .++.++||++|+..+.....++++.. ..+++..++|+.++.+++|+++++++
T Consensus 1 ~~~~~~~~~~a~~~a~~~a~~~-----~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is 75 (342)
T PRK14691 1 MGRWWRYKWITFHPSLTHADNT-----EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVS 75 (342)
T ss_pred CCHHHHHHHHHHHHHHHhCCCC-----CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHH
Confidence 5788999999999999999976 24678999999655444433334433 34677789999999999999999999
Q ss_pred HHhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCC
Q psy5222 153 EIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKL 232 (415)
Q Consensus 153 ~~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~ 232 (415)
+.||++||+++++++|+|++.||..|+++|+.|++|++||||+|..+++..+..|..++.++... ...|.+.|||||.+
T Consensus 76 ~~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~-~~~p~~~~rPFd~~ 154 (342)
T PRK14691 76 IKHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHF-NSTPEKASRPFDTA 154 (342)
T ss_pred HHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCC-CCCCCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999889999999999999988531 12478899999999
Q ss_pred CCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCC
Q psy5222 233 AEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGS 310 (415)
Q Consensus 233 ~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~ 310 (415)
++|+++||||+++|||++++|+++|.+|+++|+|++.++++.+. +.|+..+..++|+++|+++|++++|||||++|||
T Consensus 155 r~G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgt 234 (342)
T PRK14691 155 RDGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHAT 234 (342)
T ss_pred CCCccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCC
Confidence 99999999999999999999999999999999999999998776 5678899999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCC---CcccCc
Q psy5222 311 SSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA---NFSGKK 387 (415)
Q Consensus 311 gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~---~~v~~~ 387 (415)
||+.+|..|..+|+++|+.. ..+||++.|+++||+++|||+++++.++++|++++|||++|+++| +|++ ++++.+
T Consensus 235 gT~~~D~~E~~Ai~~~fg~~-~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~-d~~~~~~~~v~~~ 312 (342)
T PRK14691 235 STPVGDLGEINAIKHLFGES-NALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENP-DPAAKGLNIIAGN 312 (342)
T ss_pred CCcCCCHHHHHHHHHHhCCC-CCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCC-CccccccCcccCC
Confidence 99999999999999999864 468999999999999999999999999999999999999999999 8865 477777
Q ss_pred ccccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 388 SISININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 388 ~~~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
.++++.+++++|||||||+|+++||+++
T Consensus 313 ~~~~~~~~al~nsfgfGG~n~~lvl~~~ 340 (342)
T PRK14691 313 AQPHDMTYALSNGFGFAGVNASILLKRW 340 (342)
T ss_pred CccCCCCEEEEeCccCCCeeEEEEEeec
Confidence 7778899999999999999999999985
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-66 Score=508.81 Aligned_cols=394 Identities=20% Similarity=0.297 Sum_probs=347.7
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCcccc--ccCC-c-------cccccccccccccCCCCCCCCccCCCCCHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQS--NFSK-N-------IIAKINNFNFKNSLNKITDLSEKKKEFILHI 70 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~--~~~~-~-------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 70 (415)
||+++|.|.++++||++|++|++++++++..++. .++. . .....++ +++++.+||++.|++++++
T Consensus 6 ~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~d~~~~~i~~~~ 80 (424)
T smart00825 6 MSCRFPGADSPEEFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGG-----FLDDVDLFDAAFFGISPRE 80 (424)
T ss_pred EEeeCCCCCCHHHHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccce-----ecCchhhCCHhHcCCCHHH
Confidence 6999999999999999999999999998753332 1110 0 1233344 4455667999988899999
Q ss_pred HhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHH
Q psy5222 71 AQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGI 150 (415)
Q Consensus 71 ~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 150 (415)
.+++++.++|++.++++||+|||+++.+ ++..++||++|+..+ .+...+.+.+..+.+..++..+.+..+.+
T Consensus 81 ~~~~~~~~~l~~~aa~~Al~dAGl~~~~--id~~~~gv~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 152 (424)
T smart00825 81 AEAMDPQQRLLLEVAWEALEDAGIDPES--LRGSRTGVFVGAMSS------DYAELLARDPEDIEGYAATGTARSFIANR 152 (424)
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCCChhH--cCCCCCEEEEEEcHH------HHHHHHhhCccccchhhhccchhHHHHHH
Confidence 9999999999999999999999999988 888999999995532 22233345566678888888889999999
Q ss_pred HHHHhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCC
Q psy5222 151 MSEIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFD 230 (415)
Q Consensus 151 ia~~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd 230 (415)
++..+|++||+++++++|+|++.||..|+++|++|++|.|||+|+|...++..+..|..++.++ +...++|||
T Consensus 153 i~~~lgl~g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~-------~~~~~~pf~ 225 (424)
T smart00825 153 ISYFFDLRGPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLS-------PDGRCKTFD 225 (424)
T ss_pred HHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCC-------CCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999888999999999888877 556899999
Q ss_pred CCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEec
Q psy5222 231 KLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTH 308 (415)
Q Consensus 231 ~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h 308 (415)
.+++|+++|||++++||+++++|+++|+++|++|.|++.++++.+. ..|+...+.++++++|+++|++++|||+|++|
T Consensus 226 ~~~~g~~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h 305 (424)
T smart00825 226 ADADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAH 305 (424)
T ss_pred CCCCcccccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEee
Confidence 9999999999999999999999999999999999999999888764 56788899999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHhcCC---CceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC---
Q psy5222 309 GSSSPLGDKIEISAIKEVYKNHF---SKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--- 382 (415)
Q Consensus 309 ~~gt~~~d~~E~~al~~~~~~~~---~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--- 382 (415)
|+||+.+|..|..+|+++|+... .++++++.|+++||+.+|||+++++.++++|++++|||++|+++| ++.++
T Consensus 306 ~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~-~~~~~~~~ 384 (424)
T smart00825 306 GTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETP-NPHIDLEE 384 (424)
T ss_pred CCCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCC-CCCCCccc
Confidence 99999999999999999997532 368999999999999999999999999999999999999999999 88876
Q ss_pred ---cccCccccc----CCCEEEEeccCcCCceeEEEEeeC
Q psy5222 383 ---FSGKKSISI----NINNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 383 ---~v~~~~~~~----~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++++.++| +++++++|||||||+|+|+||++|
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~~ 424 (424)
T smart00825 385 SPLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILEEA 424 (424)
T ss_pred CceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEecC
Confidence 456677777 489999999999999999999986
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-65 Score=497.91 Aligned_cols=388 Identities=25% Similarity=0.356 Sum_probs=330.8
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||++||+|.++++||++|++|++++++++.++.. .+..++++ .++.++ .. ....+++.+++
T Consensus 18 ~G~vs~~G~~~~~~~~~L~~G~s~i~~~~~~~~~----~~~~~~~g--------~~~~~~-~~------~~~~~~~~~~~ 78 (425)
T PRK06501 18 MGVVTSLGQGKADNWAALTAGESGIHTITRFPTE----GLRTRIAG--------TVDFLP-ES------PFGASALSEAL 78 (425)
T ss_pred eeEECCCCCCHHHHHHHHHcCCCceEcCCccccc----CCCCceEE--------EEeecc-cc------cccccCHHHHH
Confidence 6999999999999999999999999999876555 56667777 443222 21 12345678899
Q ss_pred HHHHHHHHHHhCCCCCCCCCc--------------CCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccch
Q psy5222 81 SIIAALQAWYNSKLHKKKYKI--------------LPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSN 146 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~--------------~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (415)
++.++++||+|||++..+ + .+.+++++.++...... .+...+........+..++..+.+.
T Consensus 79 ~~~aa~~Al~dAgl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (425)
T PRK06501 79 ARLAAEEALAQAGIGKGD--FPGPLFLAAPPVELEWPARFALAAAVGDNDAP---SYDRLLRAARGGRFDALHERFQFGS 153 (425)
T ss_pred HHHHHHHHHHHcCCCccc--cccceeeccccccCCCCceEEEEEecCCccHH---HHHHHHhhcCcccCChhhhhhcccH
Confidence 999999999999995432 2 24678888874433221 1222222333333455667778889
Q ss_pred HHHHHHHHhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcc
Q psy5222 147 QIGIMSEIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTC 226 (415)
Q Consensus 147 ~a~~ia~~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~ 226 (415)
++.+++..||++||+++++++|+|++.||..|+++|++|++|.|||||+|..+++..+..|..++.++...+ .+...|
T Consensus 154 ~a~~i~~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~--~~~~~~ 231 (425)
T PRK06501 154 IADRLADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQND--PPEKAS 231 (425)
T ss_pred HHHHHHHHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCC--CCCccc
Confidence 999999999999999999999999999999999999999999999999998899999999999998875432 367789
Q ss_pred cCCCCCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccE
Q psy5222 227 RPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDY 304 (415)
Q Consensus 227 ~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~ 304 (415)
+|||.+++|+++|||++++|||+.++|+++|++||++|.|++.++++.+. ..|+...+.++|+++|+++|++++||||
T Consensus 232 rpfd~~r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~p~dId~ 311 (425)
T PRK06501 232 KPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLTPEQIDY 311 (425)
T ss_pred CCCCCCCCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999988776 5567888999999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--
Q psy5222 305 LNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN-- 382 (415)
Q Consensus 305 v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~-- 382 (415)
|++|||||+.+|..|..+|.++|+.....+||++.|+++||+.+|||++++++++++|+++++||++|+++| +|.++
T Consensus 312 i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~-~~~~~~~ 390 (425)
T PRK06501 312 INAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNP-DPAIPLD 390 (425)
T ss_pred EEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCC-CCCCCcc
Confidence 999999999999999999999998654579999999999999999999999999999999999999999999 98876
Q ss_pred cccCcccccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 383 FSGKKSISININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 383 ~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++.+.+.++.+.+++|||||||+|+++||+++
T Consensus 391 ~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~ 423 (425)
T PRK06501 391 VVPNVARDARVTAVLSNSFGFGGQNASLVLTAE 423 (425)
T ss_pred cCCCcccCCCCCEEEEeCccCCCeeEEEEEecC
Confidence 666666777899999999999999999999975
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-64 Score=499.00 Aligned_cols=391 Identities=20% Similarity=0.328 Sum_probs=344.6
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccc--cC------CccccccccccccccCCCCCCCCccCCCCCHHHHh
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSN--FS------KNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQ 72 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 72 (415)
||+++|.|.++++||++|++|++++++++..++.. ++ .......++ +++++..||+++|.+++++.+
T Consensus 8 ~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~i~~~~~~~~~~~~~~~~~~~ 82 (421)
T cd00833 8 MACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGG-----FLDDVDAFDAAFFGISPREAE 82 (421)
T ss_pred eeeECCCCCCHHHHHHHHHcCCCcCcCCChhHcCccccccccccCCCcceecce-----ecCCcccCCHhHcCCCHHHHH
Confidence 79999999999999999999999999998654431 10 012333444 444555688888889999999
Q ss_pred cCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHH
Q psy5222 73 KSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMS 152 (415)
Q Consensus 73 ~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 152 (415)
.++++++|++.++.+||+|||+++++ ++..++|+++|+..+ ++..........+.+..++..+.+..+.+++
T Consensus 83 ~~~~~~~l~~~aa~~AL~dAgl~~~~--~~~~~~gv~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 154 (421)
T cd00833 83 AMDPQQRLLLEVAWEALEDAGYSPES--LAGSRTGVFVGASSS------DYLELLARDPDEIDAYAATGTSRAFLANRIS 154 (421)
T ss_pred hcCHHHHHHHHHHHHHHHHcCCCchh--cCCCCceEEeCcCHH------HHHHHHhhcccccCcccccCcchHHHHHHHH
Confidence 99999999999999999999999988 899999999996544 1222222334457788888888899999999
Q ss_pred HHhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCC
Q psy5222 153 EIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKL 232 (415)
Q Consensus 153 ~~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~ 232 (415)
..+|++||+++++++|+|++.||..|+++|++|++|++||+|+|...++..+..|..++.++ +...++|||.+
T Consensus 155 ~~~gl~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~-------~~~~~~pf~~~ 227 (421)
T cd00833 155 YFFDLRGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLS-------PDGRCRPFDAD 227 (421)
T ss_pred HHcCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCC-------CCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999878888888999988887 55679999999
Q ss_pred CCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCC
Q psy5222 233 AEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGS 310 (415)
Q Consensus 233 ~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~ 310 (415)
++|+++|||++++||+++++|+++|++++++|.|++.++++.+. ..|+..++.++++++|+++|++++||||+++||+
T Consensus 228 ~~g~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgt 307 (421)
T cd00833 228 ADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGT 307 (421)
T ss_pred CCCeeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCC
Confidence 99999999999999999999999999999999999999887654 5667899999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhcCC---CceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC-----
Q psy5222 311 SSPLGDKIEISAIKEVYKNHF---SKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN----- 382 (415)
Q Consensus 311 gt~~~d~~E~~al~~~~~~~~---~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~----- 382 (415)
||+.+|..|..+|+++|+... .++++++.|+++||+++|+|++++++++++|+++.+||++|++++ +|.++
T Consensus 308 gt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~-~~~~~~~~~~ 386 (421)
T cd00833 308 GTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETP-NPKIDFEESP 386 (421)
T ss_pred CCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCC-CCCCCcccCC
Confidence 999999999999999998753 468999999999999999999999999999999999999999999 88875
Q ss_pred -cccCcccccC----CCEEEEeccCcCCceeEEEE
Q psy5222 383 -FSGKKSISIN----INNVMSNSFGFSGINSSIIL 412 (415)
Q Consensus 383 -~v~~~~~~~~----~~~~~v~s~g~gG~~~~~vl 412 (415)
+++++.++|+ ++++++|+|||||+|+|+||
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 387 LRVPTEARPWPAPAGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred eEeeCCCccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence 5677777776 79999999999999999986
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-62 Score=472.98 Aligned_cols=366 Identities=15% Similarity=0.146 Sum_probs=304.7
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHH-HHhcCCHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILH-IAQKSPLFIQ 79 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~~ 79 (415)
||++||+|.++++||++|++|+++ ...+...+. .+.... +.++|++. .++++ ..|+|++.++
T Consensus 13 iG~vsp~G~~~e~~w~aL~~G~sg-~~~~~~~~~----~~~~~~-----------~~~~~~~~-~~~~~~~~r~~~r~~~ 75 (398)
T PRK06519 13 IGLVSSLGEGLDAHWNALSAGRPQ-PNVDTETFA----PYPVHP-----------LPEIDWSQ-QIPKRGDQRQMETWQR 75 (398)
T ss_pred ceEECCCCCCHHHHHHHHHcCCCC-CCCCccccc----CcCccc-----------ccccChhh-cCCchhhhhccCHHHH
Confidence 799999999999999999999997 222222222 222222 22334444 35555 6789999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHh------------hhhh-hhcCCCCCCchhhcccccch
Q psy5222 80 TSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYS------------LYPE-FLKKPEYLSPRYAIQFMDSN 146 (415)
Q Consensus 80 l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~ 146 (415)
|++.++.+||+|||++... .++.++||++|+..+....... +... .....++++|..++++++|.
T Consensus 76 ~a~~Aa~~Al~dAGl~~~~--~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~ 153 (398)
T PRK06519 76 LGTYAAGLALDDAGIKGNE--ELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNL 153 (398)
T ss_pred HHHHHHHHHHHHcCCCCCC--CCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhH
Confidence 9999999999999997665 5678999999965544332111 1111 22456678999999999999
Q ss_pred HHHHHHHHhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcc
Q psy5222 147 QIGIMSEIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTC 226 (415)
Q Consensus 147 ~a~~ia~~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~ 226 (415)
+++++++.||++||+++++++|+|++.||.+|+++|++|++|++||||+|..+++..+..|..++.++.. .+
T Consensus 154 ~a~~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~--------~~ 225 (398)
T PRK06519 154 LAGNISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKG--------GW 225 (398)
T ss_pred HHHHHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCC--------CC
Confidence 9999999999999999999999999999999999999999999999999988999999999999988742 34
Q ss_pred cC-CCC---CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcc
Q psy5222 227 RP-FDK---LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMI 302 (415)
Q Consensus 227 ~p-fd~---~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dI 302 (415)
+| ||. +++||++|||++++|||++++|++||++||++|.|++...++ .+..++.++|++||++||+ ++||
T Consensus 226 ~p~~d~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~~-----~~~~~~~~am~~AL~~Agl-~~~I 299 (398)
T PRK06519 226 APVWSRGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVESDRAR-----RAPGDLEASLERLLKPAGG-LAAP 299 (398)
T ss_pred CchhccCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCCC-----CChHHHHHHHHHHHHHCCC-cccC
Confidence 55 565 699999999999999999999999999999999999653321 1346889999999999999 8999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC
Q psy5222 303 DYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN 382 (415)
Q Consensus 303 d~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~ 382 (415)
|||++|||||+.+|..|..||+++|+ +||++.|+++||+++|+|+++++.++++|+++++||++|+ .| +
T Consensus 300 dyI~ahgtgT~~~D~~E~~Ai~~~f~-----~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~-~~---~-- 368 (398)
T PRK06519 300 TAVISGATGAHPATAEEKAALEAALA-----GPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDA-SG---E-- 368 (398)
T ss_pred CEEEeCCCCCCCccHHHHHHHHHHcC-----CCccccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCC-Cc---c--
Confidence 99999999999999999999999996 5799999999999999999999999999999999999997 22 2
Q ss_pred cccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 383 FSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 383 ~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+++..+.+.++++++|++|.-...+++.
T Consensus 369 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (398)
T PRK06519 369 ----KPMSGAAREAVVTTVGHWRGEGMALVEA 396 (398)
T ss_pred ----cCccccccEEEEEeeccCCcceeEEEEe
Confidence 3344557899999999999988887763
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-61 Score=466.82 Aligned_cols=373 Identities=23% Similarity=0.312 Sum_probs=311.8
Q ss_pred CEEEeCcCCCHHHHHHHHHcCC-CceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGK-SGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQ 79 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 79 (415)
||++||+|.++++||++|++|+ ++|++++.+.. .++..+ + .+++|+. . .++++..|++++..+
T Consensus 9 ~G~vsp~G~~~~~~~~~l~~G~~sgi~~~~~~~~-----~~~~~~-g--------~~~~~~~-~-~~~~~~~~~~~~~~~ 72 (392)
T PRK09185 9 FGATSALGRGLDAILAALRAGRASGMRPCDFWLV-----DLPTWV-G--------EVVGVEL-P-ALPAALAAFDCRNNR 72 (392)
T ss_pred eEEECCCcCCHHHHHHHHHcCCCCCeEeCccccc-----cCCeEE-E--------EecCccc-c-cCCHHHHhcCCHHHH
Confidence 6999999999999999999999 99999875432 122233 2 3445552 2 466777788888888
Q ss_pred HHHHHHHH---HHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCC-CCCchhhcccccchHHHHHHHHh
Q psy5222 80 TSIIAALQ---AWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPE-YLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 80 l~~~a~~~---Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
++..++.+ ++.+++ .+ .+..++|+++|+..+.....+..+..+..... ...+..++.++++.++.+++..|
T Consensus 73 ~~~~a~~~~~~a~~~~~---~~--~~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 147 (392)
T PRK09185 73 LALLALQQIEPAVEAAI---AR--YGADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGSLADFLRAYL 147 (392)
T ss_pred HHHHHHHHHHHHHHhhc---cc--CCCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccHHHHHHHHHh
Confidence 88877776 555554 33 45679999999655444433333333322222 23466778888999999999999
Q ss_pred CCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCC
Q psy5222 156 NIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEG 235 (415)
Q Consensus 156 gl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G 235 (415)
|++||+++++++|+|++.||..|+++|++|++|.|||+|+|. +++..+..|..++.++. ..|+|||.+++|
T Consensus 148 gl~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~-~~~~~~~~~~~~~~l~~--------~~~~Pfd~~~~G 218 (392)
T PRK09185 148 GLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLSP--------QPCRPFSANRDG 218 (392)
T ss_pred CCCCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccc-cChHHHHHHHhccccCC--------CccCCCcCCCCc
Confidence 999999999999999999999999999999999999999994 67777778888877652 469999999999
Q ss_pred ccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCC
Q psy5222 236 FIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSP 313 (415)
Q Consensus 236 ~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~ 313 (415)
+++|||++++|||++ ++. .++|.|++.++|+.+. +.|+..++.++++++|++||++++||||+++|||||+
T Consensus 219 ~~~gEGaa~vVLe~~-----~~~--~~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~ 291 (392)
T PRK09185 219 INIGEAAAFFLLERE-----DDA--AVALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATP 291 (392)
T ss_pred cceeceEEEEEEEEc-----CCC--cEEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCCCc
Confidence 999999999999987 233 3579999999998876 5667888899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCccccc
Q psy5222 314 LGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISI 391 (415)
Q Consensus 314 ~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~ 391 (415)
.+|..|..+|.++|+.. +|+++.|+++||+++|||++++++++++|+++++||++|++++ +|+++ +++.+..++
T Consensus 292 ~~D~~E~~al~~~f~~~---~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~-~~~~~~~~~~~~~~~~ 367 (392)
T PRK09185 292 LNDAMESRAVAAVFGDG---VPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQP-DPALPPLYLVENAQAL 367 (392)
T ss_pred CCCHHHHHHHHHHhCCC---CceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCC-CCCCCccccCCCCccC
Confidence 99999999999999864 6899999999999999999999999999999999999999999 98876 666777778
Q ss_pred CCCEEEEeccCcCCceeEEEEee
Q psy5222 392 NINNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 392 ~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+++++++|||||||+|+|+||++
T Consensus 368 ~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 368 AIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred CCCEEEEeCccCCceeEEEEEEe
Confidence 89999999999999999999986
|
|
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-58 Score=457.51 Aligned_cols=384 Identities=18% Similarity=0.300 Sum_probs=347.4
Q ss_pred EeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHHHHH
Q psy5222 4 VSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQTSII 83 (415)
Q Consensus 4 v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~ 83 (415)
..|-.+++++||.+|++|.+.+...+..|..+|+ +++.+.+- +.++..||..+|+..+|+...|||+.+|.++
T Consensus 21 klPes~nv~eF~~nLl~g~DmVtdd~rrW~~G~y-gLP~r~gK------lKdL~kFDa~ff~vh~KQa~~MDPq~RlLLE 93 (2376)
T KOG1202|consen 21 KLPESDNVKEFGDNLLAGVDMVTDDPRRWEAGLY-GLPKRSGK------LKDLNKFDAGFFGVHPKQANTMDPQLRLLLE 93 (2376)
T ss_pred CCCCcccHHHHhhhhhcccccccCCccccccccc-CCchhhcc------hhhhhhhcccccCcCcccccccCHHHHHHHH
Confidence 4577899999999999999999988887777665 34444444 2357799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCCCcccc
Q psy5222 84 AALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFI 163 (415)
Q Consensus 84 a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~ 163 (415)
+.+||+-||||+|++ +.+.++|+++|.++..... .+..++..+.-+...+...++.+++|++.|+++||++.
T Consensus 94 ~t~EAivDaGiNP~~--LRGs~tGv~vg~s~seTs~------~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s 165 (2376)
T KOG1202|consen 94 ATWEAIVDAGINPDD--LRGSRTGVFVGVSGSETSG------ALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFS 165 (2376)
T ss_pred HHHHHHHhCCCChhh--cCcccceeEEeecCccccc------cccCCCccccceeecccHHHHhhcceeEEEeccCCchh
Confidence 999999999999999 9999999999955443321 12345555666777788889999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCccccceEE
Q psy5222 164 IGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYGQASA 243 (415)
Q Consensus 164 v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~geGa~ 243 (415)
++++|+|++.|+..|++.|+.|+||.+||+|+...+.|..-..|-++|+++ |++.|+.||...+|++++||.+
T Consensus 166 ~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls-------~dGsCkaFDeagnGY~Rseg~~ 238 (2376)
T KOG1202|consen 166 VDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLS-------PDGSCKAFDEAGNGYCRSEGVV 238 (2376)
T ss_pred hhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcC-------CCCcccchhccCCceeecCceE
Confidence 999999999999999999999999999999999999999999999999999 8889999999999999999999
Q ss_pred EEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC---CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHH
Q psy5222 244 ALLIEGNKNIKILNKSYLARLLGGVINLHATAS---PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEI 320 (415)
Q Consensus 244 alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~---~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~ 320 (415)
+++|.+...|++ +||.|.-..++.||..- +-|+++-+.+.++..++++|++|+++-|||+|||||+.+|.-|+
T Consensus 239 avllqrk~~ArR----vYAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVGDpQEa 314 (2376)
T KOG1202|consen 239 AVLLQRKSLARR----VYATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTKVGDPQEA 314 (2376)
T ss_pred EEEEehhHHHHH----HHHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCCCCChHHh
Confidence 999999998875 59999999999999765 88999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc-CCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC-------cccCcccccC
Q psy5222 321 SAIKEVYKN-HFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN-------FSGKKSISIN 392 (415)
Q Consensus 321 ~al~~~~~~-~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~-------~v~~~~~~~~ 392 (415)
.+|.++|.. +..++.++|+|+++||++-|||+..+.+.+++|++|.|||++|+..| +|++. -|..++.+|+
T Consensus 315 N~it~~fC~~Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tP-Np~ip~L~dGrLkVVd~~lp~~ 393 (2376)
T KOG1202|consen 315 NGITRFFCATRTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTP-NPEIPALVDGRLKVVDRPLPWR 393 (2376)
T ss_pred hhHHHHHhhcCCCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCC-CCCcchhccceeEEecCCCCcc
Confidence 999999986 44588999999999999999999999999999999999999999999 99987 4667888999
Q ss_pred CCEEEEeccCcCCceeEEEEee
Q psy5222 393 INNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 393 ~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++.+|||||||.|+|+||+.
T Consensus 394 GGivGiNSFGFGGsN~HviLks 415 (2376)
T KOG1202|consen 394 GGIVGINSFGFGGSNAHVILKS 415 (2376)
T ss_pred CceeeeeccccCCCceeEEecc
Confidence 9999999999999999999985
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=330.56 Aligned_cols=320 Identities=21% Similarity=0.347 Sum_probs=276.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
+++|++.|+++||++||++++. ...+..++++++..+...+. ....+....+.|+.+.+.+.+.++++++..+|
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~--~~~~i~~ii~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 84 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREY--QKNPIVGVVVGTGGGSPRFQ----VFGADAMRAVGPYVVTKAMFPGASGQIATPLG 84 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccc--cCCCCEEEEEEeCCccHHHH----hhhhccccccCcchhhcccchHHHHHHHHHhC
Confidence 6789999999999999998554 44556799998665544332 22234445678889999999999999999999
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCc
Q psy5222 157 IRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGF 236 (415)
Q Consensus 157 l~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~ 236 (415)
++||+++++.+|+|++.||..|.++|++|++|.+||+++|....+.... +...+.+. .++..++||+...+|+
T Consensus 85 l~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~g~ 157 (332)
T cd00825 85 IHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCE-FDAMGALS------TPEKASRTFDAAADGF 157 (332)
T ss_pred CCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHH-HHhhcccc------CCCCCCCCCCCCCCCE
Confidence 9999999999999999999999999999999999999999655555443 33333333 2667889999999999
Q ss_pred cccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCC
Q psy5222 237 IYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPL 314 (415)
Q Consensus 237 ~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~ 314 (415)
++|||++++||++.+.|++++.+++++|.+++...++... ..+....+.++++++|+++|++++|||++++|+++++.
T Consensus 158 ~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~ 237 (332)
T cd00825 158 VFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPI 237 (332)
T ss_pred EEEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCC
Confidence 9999999999999999999999999999999998887665 45677889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCC
Q psy5222 315 GDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININ 394 (415)
Q Consensus 315 ~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~ 394 (415)
.|..|..++...++.. ++++.+.|..+||+.+|++.++++.++.+++++.+||++|++++ ++...++..+..+.+.+
T Consensus 238 ~~~~e~~~~~~~~~~~--~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~ 314 (332)
T cd00825 238 GDVKELKLLRSEFGDK--SPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEEL-DEAGLNIVTETTPRELR 314 (332)
T ss_pred CCHHHHHHHHHHhCCC--CceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCC-CcccCcccCCCCCCCCC
Confidence 9999999998887654 57899999999999999999999999999999999999999998 77655666677777789
Q ss_pred EEEEeccCcCCceeEEEE
Q psy5222 395 NVMSNSFGFSGINSSIIL 412 (415)
Q Consensus 395 ~~~v~s~g~gG~~~~~vl 412 (415)
+++++++|+||+++++||
T Consensus 315 ~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 315 TALLNGFGLGGTNATLVL 332 (332)
T ss_pred EEEEeeecCCCeeEEEeC
Confidence 999999999999999986
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=313.40 Aligned_cols=327 Identities=14% Similarity=0.098 Sum_probs=250.8
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
+|++||+|.+.++.|++|++|.+.....+..... ....+-. +. .+..+......+..+|
T Consensus 10 ~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~-----~~~~i~~---------------~~-~~~~~~~~~~~r~~~L 68 (348)
T PRK06147 10 SGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPP-----GGEWLIG---------------AP-VPLPPPWRGPERLAEM 68 (348)
T ss_pred cceeecCcCCHHHHHHHHHcccccccccccccCC-----CCCceEe---------------ec-CcCCcccCchHHHHHH
Confidence 5899999999999999999998776443322110 0011000 00 1111111223467799
Q ss_pred HHHHHHHHHHhCC-CCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCC--
Q psy5222 81 SIIAALQAWYNSK-LHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNI-- 157 (415)
Q Consensus 81 ~~~a~~~Al~dag-~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl-- 157 (415)
+..|+++||++++ ++++ +++++++...... ....+ .+ ...++..++..+|+
T Consensus 69 a~~Al~~aL~~a~~~~~~-------~i~lil~~~~~~~--------------~~~~~-~~----~~~~~~~~~~~lG~~~ 122 (348)
T PRK06147 69 AAPAIAEALEGLPALDAS-------EAPLLLCVAEEER--------------PGRPP-DL----EERLLRELEARLGLRL 122 (348)
T ss_pred HHHHHHHHHHhccccccc-------CCcEEEEeCchhc--------------CCCCc-ch----HHHHHHHHHHHhCCCC
Confidence 9999999999998 4433 3567776322100 00000 00 12335677888887
Q ss_pred CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcc
Q psy5222 158 RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFI 237 (415)
Q Consensus 158 ~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~ 237 (415)
++++++|.++|+|+++||..|+++|++|++|.+||||+|..+.+..+..|...+.+.. +.+++|++
T Consensus 123 ~~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~--------------~~~~~G~v 188 (348)
T PRK06147 123 EPGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLT--------------SQNSNGFI 188 (348)
T ss_pred CCCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCC--------------CCCCCcee
Confidence 5788999999999999999999999999999999999998888888888887766552 12689999
Q ss_pred ccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCC--CC-CHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCC
Q psy5222 238 YGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASP--EP-NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPL 314 (415)
Q Consensus 238 ~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~--~~-~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~ 314 (415)
+|||++++|||+.++|++++++||+ .|++...++.+.. .| +..++.++|+++|+++|++++|||||+.|+|||+.
T Consensus 189 ~GEGA~a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~ 266 (348)
T PRK06147 189 PGEAAAAVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQY 266 (348)
T ss_pred eeceEEEEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCcc
Confidence 9999999999999999999999998 6677666664332 23 68999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCC
Q psy5222 315 GDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININ 394 (415)
Q Consensus 315 ~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~ 394 (415)
+|..|..++.++|+.....+++.+.|+++||+.+|+|+++++.++++|+++++|+.
T Consensus 267 ~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~------------------------ 322 (348)
T PRK06147 267 RFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGP------------------------ 322 (348)
T ss_pred chHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCC------------------------
Confidence 99999999999998755567899999999999999999999999999999999742
Q ss_pred EEEEeccCcCCceeEEEEee
Q psy5222 395 NVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 395 ~~~v~s~g~gG~~~~~vl~~ 414 (415)
++|+.|..-.|.-+++||++
T Consensus 323 ~~L~~s~~d~g~r~a~~l~~ 342 (348)
T PRK06147 323 NVLCHLSDDDGARAALVLEY 342 (348)
T ss_pred cEEEEecCCCCceEEEEEec
Confidence 45566666777777777764
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=285.89 Aligned_cols=238 Identities=22% Similarity=0.339 Sum_probs=183.8
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCcccc--ccCCcccccccccccc---ccCCCCCCCCccCCCCCHHHHhcCC
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQS--NFSKNIIAKINNFNFK---NSLNKITDLSEKKKEFILHIAQKSP 75 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~ 75 (415)
||+++|+|.++++||++|++|++++++++. ++. .++ .....+.+.... .+++ ..+||...+.+++++.++|+
T Consensus 9 ~g~~~p~g~~~~~~w~~L~~g~~~~~~~~~-r~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 85 (254)
T PF00109_consen 9 MGCVTPGGDGLEEFWEALLSGRSGIRPIPE-RWDPSDYY-DPPSRVAGEIDDKKGGFID-DFDFDAYFFGIPPREARRMD 85 (254)
T ss_dssp EEEEBTTBSSHHHHHHHHHTT---EEESCS-SSCHTTST-TSSCSEEECBSSSEESSST-TTCGGGTSTCHHHHHHHTS-
T ss_pred EEEECcCCCCHHHHHhhhccCceeeeeecc-cccccccc-ccCCcccccccccccceee-ecccccccccccchhhhhhh
Confidence 699999999999999999999999999985 332 221 112222221111 1444 56788888888899999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCc-EEEEEecCCChhhHHHhhhhhhhcC--CCCCCchhhcccccchHHHHHH
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPER-IGLIIAGHNTTQNYQYSLYPEFLKK--PEYLSPRYAIQFMDSNQIGIMS 152 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~-~gv~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~ia 152 (415)
++++|++.++.+||+|||++++. ++..+ +||++|+..+.. ..+....... .....|..+..+++|.++++|+
T Consensus 86 ~~~~~~l~aa~~Al~dAg~~~~~--~~~~~r~gv~~G~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia 160 (254)
T PF00109_consen 86 RQSRLALAAAREALEDAGLDPDD--LDGERRVGVFVGSSSGDY---EFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIA 160 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTSTGGG--HTGGGTEEEEEEESSSHH---HHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHH
T ss_pred hhhhHHHHHhhhhcccccccccc--cccccceeeccccccccc---cccccccccccccccccccccCcccccccccchh
Confidence 99999999999999999998877 66664 999999776622 1222222222 3455665566679999999999
Q ss_pred HHhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCC
Q psy5222 153 EIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKL 232 (415)
Q Consensus 153 ~~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~ 232 (415)
+.||++||+++++++|+||+.||..|+++|++|++|+|||||+|..+++..+..|..++.++. +..++|||.+
T Consensus 161 ~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~-------~~~~~pf~~~ 233 (254)
T PF00109_consen 161 ILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSA-------DGPCRPFDPF 233 (254)
T ss_dssp HHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-T-------TSGGGSTBTT
T ss_pred hhcCCCCccccccccccccccccchhccccccccccccccccccccccccccccccccccccc-------cccccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999998773 3579999999
Q ss_pred CCCccccceEEEEEeCChhhH
Q psy5222 233 AEGFIYGQASAALLIEGNKNI 253 (415)
Q Consensus 233 ~~G~~~geGa~alvL~~~~~A 253 (415)
++|+++|||++++|||++++|
T Consensus 234 ~~G~v~gEGa~~~vLe~~~~A 254 (254)
T PF00109_consen 234 ADGFVLGEGAGALVLERLEHA 254 (254)
T ss_dssp B-SB-BB-EEEEEEEEEHHHH
T ss_pred CCCEEEECceEEEEEEEhhhC
Confidence 999999999999999999876
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-31 Score=244.86 Aligned_cols=246 Identities=22% Similarity=0.348 Sum_probs=215.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..+|+..|+++||+++|+++++ ++ ++++++..+... .+..+.+++..+|
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~--i~----~li~~~~~~~~~-------------------------~~~~a~~i~~~lg 55 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGP--IV----GVIVGTTGGSGE-------------------------FSGAAGQLAYHLG 55 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCC--ce----EEEEEECCCCcc-------------------------ccHHHHHHHHHhC
Confidence 5689999999999999998877 66 788885543211 2466789999999
Q ss_pred C-CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCC
Q psy5222 157 I-RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEG 235 (415)
Q Consensus 157 l-~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G 235 (415)
+ ++|+++++.+|+|++.||..|+++|++|++|.+||+++|.
T Consensus 56 ~~~~~~~~i~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~-------------------------------------- 97 (254)
T cd00327 56 ISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE-------------------------------------- 97 (254)
T ss_pred CCCCCcceeccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce--------------------------------------
Confidence 9 8999999999999999999999999999999999999993
Q ss_pred ccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC-CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCC
Q psy5222 236 FIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS-PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPL 314 (415)
Q Consensus 236 ~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~-~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~ 314 (415)
+++|||++++||++++.+.+++.+++++|.++....++... ..+....+.++++++|+++|++++|||++++|.++++.
T Consensus 98 ~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~ 177 (254)
T cd00327 98 FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPI 177 (254)
T ss_pred eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCcc
Confidence 56999999999999999999999999999999887776553 35678889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCC
Q psy5222 315 GDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININ 394 (415)
Q Consensus 315 ~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~ 394 (415)
.|..|..+....+... .+++.+.+..+||+.+|++.+++..++.+++.+.+||. +.+.+
T Consensus 178 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~-------------------~~~~~ 236 (254)
T cd00327 178 GDAVELALGLDPDGVR--SPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT-------------------PREPR 236 (254)
T ss_pred ccHHHHHHHHHHhCCC--CCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCC-------------------CCCcC
Confidence 9999988766555443 47899999999999999999999999999999999872 12357
Q ss_pred EEEEeccCcCCceeEEEE
Q psy5222 395 NVMSNSFGFSGINSSIIL 412 (415)
Q Consensus 395 ~~~v~s~g~gG~~~~~vl 412 (415)
+++++++|+||+++++||
T Consensus 237 ~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 237 TVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred EEEEeeEcCCCcceEEEC
Confidence 899999999999999986
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=223.34 Aligned_cols=272 Identities=11% Similarity=0.073 Sum_probs=203.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|+|+++++ +| .+++|+...... . ..++..++..+|
T Consensus 26 ~~~La~~A~~~AL~~agl~~~d--ID----~vi~g~~~~~~~------------------------~-~~~a~~va~~lG 74 (393)
T PRK05656 26 AVELGAAVIRRLLEQTGLDPAQ--VD----EVILGQVLTAGA------------------------G-QNPARQAAIKAG 74 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEEecCCCC------------------------C-CcHHHHHHHHcC
Confidence 3689999999999999999998 88 678774321100 0 124567889999
Q ss_pred CC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHH-------------HHHHHc--ccccCC---
Q psy5222 157 IR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEI-------------QAFHAI--GAMGGK--- 216 (415)
Q Consensus 157 l~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~-------------~~~~~~--~~ls~~--- 216 (415)
+. -|+++|+.+|+|++.+|..|+++|++|.+|++||+|+|.+...... ..+... ..+...
T Consensus 75 l~~~~p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (393)
T PRK05656 75 LPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFND 154 (393)
T ss_pred CCCCcceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccC
Confidence 96 4899999999999999999999999999999999999954431100 000000 000000
Q ss_pred CCC-------------------------------CCCCCcc-------------------------------------cC
Q psy5222 217 NFY-------------------------------NFPKKTC-------------------------------------RP 228 (415)
Q Consensus 217 ~~~-------------------------------~~~~~~~-------------------------------------~p 228 (415)
..+ ..|.+.. +|
T Consensus 155 ~~~a~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p 234 (393)
T PRK05656 155 YHMGITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKP 234 (393)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCC
Confidence 000 0011000 01
Q ss_pred CCCCCCCcc-------ccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCc
Q psy5222 229 FDKLAEGFI-------YGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNM 301 (415)
Q Consensus 229 fd~~~~G~~-------~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~d 301 (415)
+- ..+|.+ ++|||+++||++++.|+++|.+|+++|.|++..... +.+...+...+++++|+++|++++|
T Consensus 235 ~~-~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~~---~~~~~~~~~~a~~~al~~agl~~~d 310 (393)
T PRK05656 235 AF-KKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVD---PAIMGIGPVSATRRCLDKAGWSLAE 310 (393)
T ss_pred Cc-CCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCC---CcccchhHHHHHHHHHHHcCCCHHH
Confidence 10 023434 899999999999999999999999999999886532 2334557789999999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCC
Q psy5222 302 IDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA 381 (415)
Q Consensus 302 Id~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~ 381 (415)
||++|+|++ +..|..++.+.|+....++++++.|..+|||.||+|+.+++.++++|+..
T Consensus 311 Id~~e~~d~-----f~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~~---------------- 369 (393)
T PRK05656 311 LDLIEANEA-----FAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIRR---------------- 369 (393)
T ss_pred CCEEEecCc-----cHHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHHc----------------
Confidence 999999965 44677888888876555789999999999999999999999999988741
Q ss_pred CcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 382 NFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 382 ~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++++.+...-||..+++|||+
T Consensus 370 ----------~~~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 370 ----------DAKKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred ----------CCCEEEEEEcccCcceEEEEEec
Confidence 13778898999999999999986
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=218.68 Aligned_cols=273 Identities=13% Similarity=0.086 Sum_probs=198.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|+|+++++ +| ++++++...... . ...+..++..+|
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~d--ID----~vi~~~~~~~~~------------------------~-~~~a~~v~~~lG 70 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEE--VD----DVIMGNVLQAGE------------------------G-QNPARQAALLAG 70 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHH--CC----EEEEEeccCCCC------------------------C-ChHHHHHHHHcC
Confidence 4689999999999999999988 87 677764321110 0 123557889999
Q ss_pred CCC--ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHH------HH---------HHcccccCC-CC
Q psy5222 157 IRG--EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQ------AF---------HAIGAMGGK-NF 218 (415)
Q Consensus 157 l~G--p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~------~~---------~~~~~ls~~-~~ 218 (415)
++. |.+.|+.+|+|++.+|..|+++|++|.+|.|||+|+|.+....... .+ ...+..... ..
T Consensus 71 l~~~~~~~~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (386)
T cd00751 71 LPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGL 150 (386)
T ss_pred CCCCCchhhhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCC
Confidence 974 8999999999999999999999999999999999998532211000 00 000000000 00
Q ss_pred -C--------------------------------CC-----------------------CCCcccC-------------C
Q psy5222 219 -Y--------------------------------NF-----------------------PKKTCRP-------------F 229 (415)
Q Consensus 219 -~--------------------------------~~-----------------------~~~~~~p-------------f 229 (415)
. .. |+...|+ +
T Consensus 151 ~~a~~a~~~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~ 230 (386)
T cd00751 151 SMGITAENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAF 230 (386)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCc
Confidence 0 00 1111111 1
Q ss_pred C-----CCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccE
Q psy5222 230 D-----KLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDY 304 (415)
Q Consensus 230 d-----~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~ 304 (415)
+ ...+...++||++++||++++.|++++.+++++|+|++..++... +...+...+++++|++||++++|||+
T Consensus 231 ~p~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~---~~~~~~~~a~~~a~~~Agi~~~did~ 307 (386)
T cd00751 231 KKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPA---IMGIGPVPAIPKALKRAGLTLDDIDL 307 (386)
T ss_pred CCCCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCc---ccchhHHHHHHHHHHHcCCCHHHcCE
Confidence 1 123445679999999999999999999999999999998876432 23456679999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcc
Q psy5222 305 LNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFS 384 (415)
Q Consensus 305 v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v 384 (415)
+|+|++++. .|.. ..+.|+-...++++.+.+...||+.+|+|+.+++++++||+..
T Consensus 308 ~e~~d~f~~----~~~~-~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~------------------- 363 (386)
T cd00751 308 IEINEAFAA----QALA-CLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRR------------------- 363 (386)
T ss_pred EEeechhHH----HHHH-HHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc-------------------
Confidence 999977762 2222 2334443323678888888999999999999999999999863
Q ss_pred cCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 385 GKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 385 ~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++++++..+-||..+++|||+
T Consensus 364 -------~~~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 364 -------GGRYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred -------CCCEEEEEEcccccceEEEEEEC
Confidence 13789999999999999999985
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=214.85 Aligned_cols=268 Identities=15% Similarity=0.089 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..+++++|+|+|+++++ +| .+++|........ ...+..++...|
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~--Id----~vv~G~~~~~~~g-------------------------~~~~r~~~~~~G 75 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPAL--VN----EVILGQVITGGSG-------------------------QNPARQTLIHAG 75 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--cC----EEEEEecCccccc-------------------------cHHHHHHHHHCC
Confidence 3478899999999999999988 88 5777733211100 134456778889
Q ss_pred CC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCC-HHH-H-H---------HHH---HcccccCC-C-
Q psy5222 157 IR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLS-PME-I-Q---------AFH---AIGAMGGK-N- 217 (415)
Q Consensus 157 l~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~-~~~-~-~---------~~~---~~~~ls~~-~- 217 (415)
+. -|+++|+.+|+||+.|+..|++.|++|++|++||+|+|++.. +.. . . ... ..+..... .
T Consensus 76 l~~~~p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (392)
T PRK06633 76 IPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGV 155 (392)
T ss_pred CCCCccchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcc
Confidence 96 399999999999999999999999999999999999996542 210 0 0 000 00000000 0
Q ss_pred CC------------------------------CCCCCc--------------------------------------ccCC
Q psy5222 218 FY------------------------------NFPKKT--------------------------------------CRPF 229 (415)
Q Consensus 218 ~~------------------------------~~~~~~--------------------------------------~~pf 229 (415)
.+ ..|... ...|
T Consensus 156 ~~a~~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~~ 235 (392)
T PRK06633 156 FMGITAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAF 235 (392)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCHHHHccCCCcc
Confidence 00 000000 1112
Q ss_pred CC-----CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccE
Q psy5222 230 DK-----LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDY 304 (415)
Q Consensus 230 d~-----~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~ 304 (415)
+. ..+...++|||+++||++++.|++++.+++++|+|++...+... ....+...+++++|++||++++|||+
T Consensus 236 ~~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~---~~~~~~~~a~~~Al~~AGl~p~DID~ 312 (392)
T PRK06633 236 DKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPS---IMGTAPVPASQKALSKAGWSVNDLEV 312 (392)
T ss_pred CCCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcc---hhchHHHHHHHHHHHHcCCCHHHcCe
Confidence 11 01225589999999999999999999999999999998764322 22356688999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhc-----CCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCC
Q psy5222 305 LNTHGSSSPLGDKIEISAIKEVYKN-----HFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDN 379 (415)
Q Consensus 305 v~~h~~gt~~~d~~E~~al~~~~~~-----~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~ 379 (415)
+|+| |..++..++.. +..++++++.|..+|||+||+|+++++.++++|++.
T Consensus 313 ~ei~----------dafa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~-------------- 368 (392)
T PRK06633 313 IEVN----------EAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRA-------------- 368 (392)
T ss_pred eehh----------hHHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhc--------------
Confidence 9988 44444444332 234688999999999999999999999999999862
Q ss_pred CCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 380 QANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 380 ~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++.+.+...-||.-.++|||+
T Consensus 369 ------------~~~~g~~~~c~~gG~g~a~~~e~ 391 (392)
T PRK06633 369 ------------KAKKGLVTLCIGGGMGMAMCVEA 391 (392)
T ss_pred ------------CCCeEEEEEecccChhheEEEEe
Confidence 12567777778889999999986
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-24 Score=210.13 Aligned_cols=289 Identities=14% Similarity=0.165 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+++++||+|+|+++++ +| ++++|+..+..... ...++..++..+|
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~--Id----~vi~g~~~~~~~~~-----------------------~~~~a~~va~~lG 72 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKD--ID----AMYVGNMSAGLFVS-----------------------QEHIAALIADYAG 72 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecccccccc-----------------------cccHHHHHHHHcC
Confidence 4688999999999999999888 77 67777432111000 0124668899999
Q ss_pred CC-CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHH--HHH-H--------HHH-ccc--------ccC
Q psy5222 157 IR-GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPM--EIQ-A--------FHA-IGA--------MGG 215 (415)
Q Consensus 157 l~-Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~--~~~-~--------~~~-~~~--------ls~ 215 (415)
++ .|.++++++|+|++.+|..|+++|++|++|.|||+|.|.+.... ... . +.. .+. +..
T Consensus 73 l~~~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~ 152 (389)
T PRK06064 73 LAPIPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIAR 152 (389)
T ss_pred CCCCCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHH
Confidence 98 59999999999999999999999999999999999998532110 000 0 000 000 000
Q ss_pred ---------------------CCCCCCCCCc----------------ccCCCCCCCCccccceEEEEEeCChhhHHhcCC
Q psy5222 216 ---------------------KNFYNFPKKT----------------CRPFDKLAEGFIYGQASAALLIEGNKNIKILNK 258 (415)
Q Consensus 216 ---------------------~~~~~~~~~~----------------~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~ 258 (415)
.+....|... +.|+. ..+...++|||+++||++++.|++++.
T Consensus 153 ~~~~~yG~s~e~~a~~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl~-~~d~~~~~dGAaa~vL~s~~~A~~~~~ 231 (389)
T PRK06064 153 RYMHKYGTTEEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPLK-LLDCSPITDGAAAVILASEEKAKEYTD 231 (389)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCCc-hhhcCCCCCcceEEEEecHHHHHHhcC
Confidence 0000011100 11221 235557899999999999999999876
Q ss_pred eeEEEEEeEEeccCCCCC-CC---CCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHH--------
Q psy5222 259 SYLARLLGGVINLHATAS-PE---PNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEV-------- 326 (415)
Q Consensus 259 ~i~a~i~g~~~~~~~~~~-~~---~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~-------- 326 (415)
++ ++|.|++..++..+. .. +.......+++++|+++|++++|||++|+|++++. .+..+.+++.-.
T Consensus 232 ~~-v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~-~~~~~~e~lgl~~~G~~~~~ 309 (389)
T PRK06064 232 TP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTI-AEILAYEDLGFAKKGEGGKL 309 (389)
T ss_pred CC-eEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcH-HHHHHHHHcCCCCCCchHHH
Confidence 54 699999988776654 22 23566778999999999999999999999999995 344444444211
Q ss_pred HhcC----CCceeeeecccc--cchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEec
Q psy5222 327 YKNH----FSKLLLNSTKSL--TGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNS 400 (415)
Q Consensus 327 ~~~~----~~~~~v~~~k~~--~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s 400 (415)
+.+. ...+|++...+. .||+.+|+|+.+++++++||+.+.- ..-++. ...+.+++++
T Consensus 310 ~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~---~g~rqv--------------~~a~~~l~~~ 372 (389)
T PRK06064 310 AREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAE---KGRQQV--------------IGAGYGLTHN 372 (389)
T ss_pred HHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCC---CCCccC--------------CCccEEEEec
Confidence 1110 013567666665 6999999999999999999997520 000011 1247888888
Q ss_pred cC-cCCceeEEEEee
Q psy5222 401 FG-FSGINSSIILCK 414 (415)
Q Consensus 401 ~g-~gG~~~~~vl~~ 414 (415)
+| .+..++.+||++
T Consensus 373 ~g~~~~~~~~~vl~~ 387 (389)
T PRK06064 373 VGGTGHTAVVHILSR 387 (389)
T ss_pred CCCccceEEEEEEEe
Confidence 87 445677777775
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=209.85 Aligned_cols=275 Identities=13% Similarity=0.076 Sum_probs=198.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+++|+++++ +| .+++|+...... .....+..++..+|
T Consensus 27 ~~eL~~~A~~~AL~~agi~~~d--ID----~vi~g~~~~~~~------------------------~~~~~a~~~~~~~G 76 (394)
T PRK09051 27 PTDLGATVVREALARAGVDPDQ--VG----HVVFGHVIPTEP------------------------RDMYLSRVAAINAG 76 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--cC----EEEEeeeccccC------------------------CCccHHHHHHHHcC
Confidence 3689999999999999999988 87 577774321000 00123445667778
Q ss_pred CC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHH-H------------HHHH-cccccC---CC
Q psy5222 157 IR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEI-Q------------AFHA-IGAMGG---KN 217 (415)
Q Consensus 157 l~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~-~------------~~~~-~~~ls~---~~ 217 (415)
+. -|+++|+.+|+|++.|+..|+++|++|.+|++||+|+|.+...... . .+.. ...+.. ..
T Consensus 77 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (394)
T PRK09051 77 VPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTI 156 (394)
T ss_pred CCCCCceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCC
Confidence 84 4999999999999999999999999999999999999965432100 0 0000 000000 00
Q ss_pred CC------------------------------C-------------------------CCCCccc------------CCC
Q psy5222 218 FY------------------------------N-------------------------FPKKTCR------------PFD 230 (415)
Q Consensus 218 ~~------------------------------~-------------------------~~~~~~~------------pfd 230 (415)
.. . +|+...| |+.
T Consensus 157 ~~~~~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~ 236 (394)
T PRK09051 157 HMGVTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVF 236 (394)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCcc
Confidence 00 0 2333333 221
Q ss_pred C-------CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCccc
Q psy5222 231 K-------LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMID 303 (415)
Q Consensus 231 ~-------~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId 303 (415)
. ..+...++|||+++||++++.|+++|.+++++|+|++...... .+...+...+++++|++||++++|||
T Consensus 237 ~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~---~~~~~~~~~a~~~al~~agi~~~did 313 (394)
T PRK09051 237 KKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDP---EYMGIGPVPATQKALERAGLTVADLD 313 (394)
T ss_pred cCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCC---CcccccHHHHHHHHHHHcCCCHHHcC
Confidence 1 1123346899999999999999999999999999999876432 22345668899999999999999999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCc
Q psy5222 304 YLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANF 383 (415)
Q Consensus 304 ~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~ 383 (415)
++|+|+..+ .+..+..+.|+-...++++++.+..+|||.||+|+.+++.++.+|+++
T Consensus 314 ~~ei~d~f~-----~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~------------------ 370 (394)
T PRK09051 314 VIEANEAFA-----AQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQRI------------------ 370 (394)
T ss_pred EEEecCccH-----HHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhc------------------
Confidence 999996544 566666677775444677777777899999999999999999999862
Q ss_pred ccCcccccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 384 SGKKSISININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 384 v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
..++.+++...-||...++|||+.
T Consensus 371 --------~~~~g~~~~c~~gG~g~a~~~e~~ 394 (394)
T PRK09051 371 --------GGRYALVTMCIGGGQGIAAIFERL 394 (394)
T ss_pred --------CCCEEEEEEccccChhhEEEEEeC
Confidence 136778888888999999999863
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-24 Score=209.76 Aligned_cols=284 Identities=13% Similarity=0.114 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|+|+++++ +| ++++|+...... ...++..++..+|
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~d--ID----~vi~g~~~~~~~-------------------------~~~~a~~v~~~lG 69 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTD--IE----LVVVGSTAYRGI-------------------------ELYPAPIVAEYSG 69 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecccccc-------------------------cCChHHHHHHHhC
Confidence 4689999999999999999988 87 677774321000 0123567889999
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHH--HH---------HH--Hcc-----------
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEI--QA---------FH--AIG----------- 211 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~--~~---------~~--~~~----------- 211 (415)
+.+ +.++|+.+|+|++.||..|++.|++|++|.+||+|+|.+...... .. +. ..+
T Consensus 70 l~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a 149 (385)
T PRK12578 70 LTGKVPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYA 149 (385)
T ss_pred CCCCCeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHH
Confidence 976 778999999999999999999999999999999999954321100 00 00 000
Q ss_pred --cccCCCCC----------------CCCCCc----------------ccCCCCCCCCccccceEEEEEeCChhhHHhcC
Q psy5222 212 --AMGGKNFY----------------NFPKKT----------------CRPFDKLAEGFIYGQASAALLIEGNKNIKILN 257 (415)
Q Consensus 212 --~ls~~~~~----------------~~~~~~----------------~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g 257 (415)
.+...... ..|... +.|+ ..-+...++|||+++||++++.|++.+
T Consensus 150 ~~~m~~~g~t~e~~a~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl-~~~d~~~~~DGAaA~vl~s~e~A~~l~ 228 (385)
T PRK12578 150 TRHMAVYGTTEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPI-KLLDSCPISDGSATAIFASEEKVKELK 228 (385)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCc-cHhhcCCcCCCeEEEEEecHHHHHhcC
Confidence 00000000 112111 1122 123556689999999999999999988
Q ss_pred CeeEEEEEeEEeccCCCCC-CCCC---HHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHH-HhcCC-
Q psy5222 258 KSYLARLLGGVINLHATAS-PEPN---LNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEV-YKNHF- 331 (415)
Q Consensus 258 ~~i~a~i~g~~~~~~~~~~-~~~~---~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~-~~~~~- 331 (415)
.+++++|.|++...+..+. ..|+ ..+...+++++|++||++++|||++|+|++++. .|...++.+ |..++
T Consensus 229 ~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft~----~~l~~le~lGl~~~G~ 304 (385)
T PRK12578 229 IDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFTI----AEIMGYEDLGFTEKGK 304 (385)
T ss_pred CCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH----HHHHHHHHcCCCCCCc
Confidence 7778999999988765543 2222 235678999999999999999999999999983 566666544 22110
Q ss_pred ----------C-----ceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEE
Q psy5222 332 ----------S-----KLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNV 396 (415)
Q Consensus 332 ----------~-----~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 396 (415)
. +++..+.--..|||.||+|+.+++++++||+...= -++. +-..+++
T Consensus 305 ~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~ag-----~~qv-------------~~~~~~~ 366 (385)
T PRK12578 305 GGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDEAG-----KLQQ-------------PLKKYIG 366 (385)
T ss_pred hHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCCcc-----cCcC-------------CcchheE
Confidence 1 34444444446999999999999999999986421 0011 0113578
Q ss_pred EEeccC-cCCceeEEEEee
Q psy5222 397 MSNSFG-FSGINSSIILCK 414 (415)
Q Consensus 397 ~v~s~g-~gG~~~~~vl~~ 414 (415)
++.+.| .|..+.++||++
T Consensus 367 l~~~~Gg~~~~~~~~v~~~ 385 (385)
T PRK12578 367 LVHNVGGTGHFAYVMILRR 385 (385)
T ss_pred EEeccCcchhhEEEEEEeC
Confidence 888877 666677777764
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-24 Score=208.32 Aligned_cols=274 Identities=12% Similarity=0.065 Sum_probs=194.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..|++++|+++|+++++ +| -+++|+....... ...++...+...|
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~--ID----~vi~G~~~~~~~~------------------------~~~~~r~a~~~~G 77 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAA--VD----DVVLGCVTPVGDQ------------------------GADIARTAVLAAG 77 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--cC----EEEEEecCCCccc------------------------cccHHHHHHHHcC
Confidence 4478899999999999999988 77 5777744321100 0234455667778
Q ss_pred C--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH-H----------HH----HHHcccccCC---
Q psy5222 157 I--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME-I----------QA----FHAIGAMGGK--- 216 (415)
Q Consensus 157 l--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~-~----------~~----~~~~~~ls~~--- 216 (415)
+ +-|+++|+.+|+|+++||..|+++|++|.+|++|++|+|.+...+. . .. +..++..+++
T Consensus 78 l~~~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~ 157 (402)
T PRK08242 78 LPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIAT 157 (402)
T ss_pred CCCCCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHH
Confidence 8 3499999999999999999999999999999999999996543210 0 00 0000000000
Q ss_pred -CCC----------------------------------------CCCCCccc-------------CCCCCC---------
Q psy5222 217 -NFY----------------------------------------NFPKKTCR-------------PFDKLA--------- 233 (415)
Q Consensus 217 -~~~----------------------------------------~~~~~~~~-------------pfd~~~--------- 233 (415)
... .+++...| .|+...
T Consensus 158 ~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~ 237 (402)
T PRK08242 158 KYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVA 237 (402)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCcccccc
Confidence 000 01222222 233210
Q ss_pred -----------------CCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcC
Q psy5222 234 -----------------EGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSG 296 (415)
Q Consensus 234 -----------------~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Ag 296 (415)
+...++|||+++||++++.|+++|.+++++|.|++...+.... ...+...+++++|+++|
T Consensus 238 ~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~---~~~~~~~a~~~al~~AG 314 (402)
T PRK08242 238 LQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTI---MLTGPVPATRKALAKAG 314 (402)
T ss_pred cccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchh---hcccHHHHHHHHHHHcC
Confidence 3336899999999999999999999999999999887543221 22344679999999999
Q ss_pred CCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCC
Q psy5222 297 LKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP 376 (415)
Q Consensus 297 l~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~ 376 (415)
++++|||++|+|...+. .+ .+..+.++-...++++.+.+..+|||.||+|+.+++.++++|+++
T Consensus 315 l~~~DID~~ei~daFa~----~~-l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~----------- 378 (402)
T PRK08242 315 LTVDDIDLFELNEAFAS----VV-LRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR----------- 378 (402)
T ss_pred CCHHHCCEEEecchhhH----HH-HHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhc-----------
Confidence 99999999999854442 12 222344554334789999999999999999999999999999852
Q ss_pred CCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 377 IDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 377 ~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++.+++...=||+..++|||+
T Consensus 379 ---------------~~~~g~~~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 379 ---------------GKRTALITLCVGGGMGIATIIER 401 (402)
T ss_pred ---------------CCCeEEEEEcccCCceeEEEEEe
Confidence 13667788888899999999986
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=209.54 Aligned_cols=272 Identities=15% Similarity=0.088 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|+|+++++ +| ++++++..... .. ...+..++..+|
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~d--ID----~vv~g~~~~~~--------------------~~-----~~~a~~va~~lG 69 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPEL--ID----DVIFGNVLQAG--------------------EQ-----QNIARQAALLAG 69 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeccCCC--------------------CC-----ChHHHHHHHHcC
Confidence 4689999999999999999988 87 67776432100 00 123456888889
Q ss_pred CC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHH------H--H---------HHcccccC--
Q psy5222 157 IR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQ------A--F---------HAIGAMGG-- 215 (415)
Q Consensus 157 l~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~------~--~---------~~~~~ls~-- 215 (415)
+. .|.+.++.+|+|++.+|..|+++|++|.+|.+||+|+|.+....... . + ...+....
T Consensus 70 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 149 (386)
T TIGR01930 70 LPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLN 149 (386)
T ss_pred CCCCceeeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCcccccccc
Confidence 86 48999999999999999999999999999999999988532111000 0 0 00000000
Q ss_pred CCCC------------------------------CC-----------CC--------------Cccc-CCC---------
Q psy5222 216 KNFY------------------------------NF-----------PK--------------KTCR-PFD--------- 230 (415)
Q Consensus 216 ~~~~------------------------------~~-----------~~--------------~~~~-pfd--------- 230 (415)
.... .. |. ...+ |..
T Consensus 150 ~~~~a~~a~~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~~ 229 (386)
T TIGR01930 150 GLSMGLTAENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLKP 229 (386)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCC
Confidence 0000 00 21 0000 110
Q ss_pred --------CCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcc
Q psy5222 231 --------KLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMI 302 (415)
Q Consensus 231 --------~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dI 302 (415)
...+...++|||+++||++++.|++++.+++++|.|++..... +.+...+...+++++|++||++++||
T Consensus 230 i~~P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~---~~~~~~~~~~a~~~a~~~Agi~~~di 306 (386)
T TIGR01930 230 AFDPNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVD---PEIMGLGPVPAIPKALKKAGLSISDI 306 (386)
T ss_pred CcCCCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCC---CccccccHHHHHHHHHHHcCCCHHHC
Confidence 1123445799999999999999999999999999999887532 22233456789999999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC
Q psy5222 303 DYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN 382 (415)
Q Consensus 303 d~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~ 382 (415)
|++++|++.+. +.....+.|+-...++++++.+..+||+.+|+|+.+++.+++||+..
T Consensus 307 d~~e~~d~fa~-----~~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~----------------- 364 (386)
T TIGR01930 307 DLFEINEAFAA-----QVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR----------------- 364 (386)
T ss_pred CeeehcchhHH-----HHHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc-----------------
Confidence 99999977762 22223344443333688899999999999999999999999999863
Q ss_pred cccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 383 FSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 383 ~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+.++++++..+-||...++|||
T Consensus 365 ---------~~~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 365 ---------GGRYGLATICIGGGQGIAVILE 386 (386)
T ss_pred ---------CCCEEEEEEeccCCceEEEEeC
Confidence 1378889888999999999986
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=210.12 Aligned_cols=269 Identities=13% Similarity=0.056 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+++++||+++|+++++ +| .+++|+..... .....++.+++..+|
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~--ID----~vi~G~~~~~~------------------------~~~~~~a~~i~~~lG 76 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAE--VE----DVIMGCANPEG------------------------ATGANIARQIALRAG 76 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----cEEEEEeeccc------------------------ccccHHHHHHHHHcC
Confidence 4689999999999999999998 87 47777432110 001136778888889
Q ss_pred CC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH----------HHH------HHHccc------
Q psy5222 157 IR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME----------IQA------FHAIGA------ 212 (415)
Q Consensus 157 l~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~----------~~~------~~~~~~------ 212 (415)
+. .|+++|+.+|+||+.||..|+++|++|++|++||+|+|++..... +.. +..++.
T Consensus 77 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a 156 (392)
T PRK07108 77 LPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVA 156 (392)
T ss_pred CCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHHH
Confidence 85 699999999999999999999999999999999999996543110 000 000000
Q ss_pred ----c------------------cCCCCC--------------CCCCCc--------------------------c-cCC
Q psy5222 213 ----M------------------GGKNFY--------------NFPKKT--------------------------C-RPF 229 (415)
Q Consensus 213 ----l------------------s~~~~~--------------~~~~~~--------------------------~-~pf 229 (415)
+ +.++.. .+|... . .+|
T Consensus 157 ~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~ 236 (392)
T PRK07108 157 KRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL 236 (392)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCC
Confidence 0 000000 001110 1 112
Q ss_pred C----CCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEE
Q psy5222 230 D----KLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYL 305 (415)
Q Consensus 230 d----~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v 305 (415)
. ...+...++|||+++||++++.|++++.+++++|+|++...+. +.+...+...+++++|++||++++|||++
T Consensus 237 ~~g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~---~~~~~~~~~~a~~~al~~agl~~~Did~~ 313 (392)
T PRK07108 237 PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCE---PDEMGIGPVFAVPKLLKQAGLKVDDIDLW 313 (392)
T ss_pred CCCCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccC---CcccchhHHHHHHHHHHHcCCCHHHcCch
Confidence 1 1123445899999999999999999999999999999987543 22334566899999999999999999999
Q ss_pred EecCCCCCCCCHHHHHHHHHHH-----hcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCC
Q psy5222 306 NTHGSSSPLGDKIEISAIKEVY-----KNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQ 380 (415)
Q Consensus 306 ~~h~~gt~~~d~~E~~al~~~~-----~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~ 380 (415)
|.| |..++..++ +-...++++++.+..+|||.||+|+..++.++.+|++.
T Consensus 314 ei~----------eafa~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~~--------------- 368 (392)
T PRK07108 314 ELN----------EAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRR--------------- 368 (392)
T ss_pred Hhh----------hHHHHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHhh---------------
Confidence 988 555555544 22223688899999999999999999999999999751
Q ss_pred CCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 381 ANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 381 ~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++.++....-||.-.++|||+
T Consensus 369 -----------~~~~g~~~~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 369 -----------GAKYVVVTMCIGGGQGAAGLFEV 391 (392)
T ss_pred -----------CCCEEEEEEccccChhhEEEEEe
Confidence 13678888888899999999986
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-24 Score=205.61 Aligned_cols=272 Identities=14% Similarity=0.063 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+++++||+++|+.+++ +| .+++|........ ...++.+++..+|
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~d--ID----~vi~g~~~~~~~~------------------------g~~~a~~~~~~lG 76 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGP--ID----DLIIGCAMPEAEQ------------------------GLNMARNIGALAG 76 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhH--CC----EEEEEeccccccc------------------------cchHHHHHHHHcC
Confidence 3689999999999999977677 77 5777733211000 0133456888999
Q ss_pred CC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH-----------------H---HHH------H
Q psy5222 157 IR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME-----------------I---QAF------H 208 (415)
Q Consensus 157 l~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~-----------------~---~~~------~ 208 (415)
+. -|.++|+.+|+||+.|+..|++.|++|.+|++||+|+|.+..... + ..+ .
T Consensus 77 l~~~~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~ 156 (391)
T PRK07661 77 LPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAV 156 (391)
T ss_pred CCCCcceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHHH
Confidence 97 499999999999999999999999999999999999996432110 0 000 0
Q ss_pred Hcccc-----------------cCCC-CCCC---------C----C-------------Ccc------------cC-CC-
Q psy5222 209 AIGAM-----------------GGKN-FYNF---------P----K-------------KTC------------RP-FD- 230 (415)
Q Consensus 209 ~~~~l-----------------s~~~-~~~~---------~----~-------------~~~------------~p-fd- 230 (415)
..+.- .... .... + + ... +| |.
T Consensus 157 ~~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~ 236 (391)
T PRK07661 157 KYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNV 236 (391)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCC
Confidence 00000 0000 0000 0 0 000 11 11
Q ss_pred ----CCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEE
Q psy5222 231 ----KLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLN 306 (415)
Q Consensus 231 ----~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~ 306 (415)
...+...++|||+++||++++.|+++|.+++++|+|++..+.... +...+...+++++|++||++++|||++|
T Consensus 237 ~g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~---~~~~~~~~a~~~al~~agl~~~did~~e 313 (391)
T PRK07661 237 KGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPE---VMGIGPIAAIPKALKLAGLELSDIGLFE 313 (391)
T ss_pred CCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCc---ccchHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 113444589999999999999999999999999999998864322 2334678999999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHH--HHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcc
Q psy5222 307 THGSSSPLGDKIEISAIKE--VYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFS 384 (415)
Q Consensus 307 ~h~~gt~~~d~~E~~al~~--~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v 384 (415)
+| |..+...+.. .|+-...++++++.+..+|||.||||+.+++.++++|+++
T Consensus 314 i~-------d~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~------------------- 367 (391)
T PRK07661 314 LN-------EAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRR------------------- 367 (391)
T ss_pred eC-------CHHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhc-------------------
Confidence 77 5555555543 3554334788899999999999999999999999999862
Q ss_pred cCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 385 GKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 385 ~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++.+.....-||.-.++|||+
T Consensus 368 -------~~~~g~~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 368 -------NEQFGIVTMCIGGGMGAAGVFEL 390 (391)
T ss_pred -------CCCeEEEEEccccChhhEEEEEe
Confidence 13577788888899999999986
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.9e-24 Score=206.34 Aligned_cols=272 Identities=16% Similarity=0.088 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 77 FIQTSIIAALQAWYNS-KLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 77 ~~~l~~~a~~~Al~da-g~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
...|+.+|+++||+++ |+++++ +| .+++|+..... ......+..+...+
T Consensus 31 ~~eLa~~A~~~AL~~a~gl~~~d--ID----~vi~g~~~~~~------------------------~~~~~~ar~~~~~~ 80 (399)
T PRK09052 31 PDDLLAHVLRSAVAQVPGLDPKL--IE----DAIVGCAMPEA------------------------EQGLNVARIGALLA 80 (399)
T ss_pred HHHHHHHHHHHHHHhccCcCHHH--CC----EEEEEecCCCC------------------------CCCchHHHHHHHHc
Confidence 4689999999999997 999998 88 68888432110 00012233455666
Q ss_pred CCC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHH--------HHHHcccccCCCCC------
Q psy5222 156 NIR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQ--------AFHAIGAMGGKNFY------ 219 (415)
Q Consensus 156 gl~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~--------~~~~~~~ls~~~~~------ 219 (415)
|+. -|+++|+.+|+|++.||..|+++|++|++|+|||+|+|.+....... .+.....+.....+
T Consensus 81 Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (399)
T PRK09052 81 GLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEK 160 (399)
T ss_pred CCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHH
Confidence 885 37999999999999999999999999999999999999654322000 00000000000000
Q ss_pred ------------------------CCCCC-----ccc--------------------C----------------------
Q psy5222 220 ------------------------NFPKK-----TCR--------------------P---------------------- 228 (415)
Q Consensus 220 ------------------------~~~~~-----~~~--------------------p---------------------- 228 (415)
..|.. ... |
T Consensus 161 ~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p 240 (399)
T PRK09052 161 VAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKP 240 (399)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCC
Confidence 00000 000 0
Q ss_pred -CCC-----CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcc
Q psy5222 229 -FDK-----LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMI 302 (415)
Q Consensus 229 -fd~-----~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dI 302 (415)
|+. ..+...++|||+++||++++.|+++|.+++++|.|++....... +...+...+++++|++||++++||
T Consensus 241 ~f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~---~~~~~~~~A~~~al~~Agi~~~di 317 (399)
T PRK09052 241 VFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPE---IMGIGPIEAIPAALKQAGLKQDDL 317 (399)
T ss_pred ccCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCC---ccchhHHHHHHHHHHHcCCCHHHc
Confidence 110 01225689999999999999999999999999999998754322 234467899999999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeeccc--ccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCC
Q psy5222 303 DYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKS--LTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQ 380 (415)
Q Consensus 303 d~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~--~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~ 380 (415)
|++|+|+..+ .+..+..+.|+-.. .|++..++ .+|||.||+|+++++.++++|+++
T Consensus 318 d~~ei~D~f~-----~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~--------------- 375 (399)
T PRK09052 318 DWIELNEAFA-----AQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHGLRRT--------------- 375 (399)
T ss_pred CEEEeCcHHH-----HHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHHHHhc---------------
Confidence 9999884333 23333345565432 34555555 679999999999999999999863
Q ss_pred CCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 381 ANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 381 ~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++.++...+-||.-.++|||+
T Consensus 376 -----------~~~~g~~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 376 -----------NLKYGMVTMCVGTGMGAAGIFER 398 (399)
T ss_pred -----------CCCeEEEEEcccCCceeEEEEEe
Confidence 12567888888899999999985
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.7e-24 Score=207.02 Aligned_cols=272 Identities=13% Similarity=0.119 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|+|+++++ +| ++++|+...... ....+..+...+|
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~d--ID----~vi~g~~~~~~~-------------------------~~~~~~~~~~~~g 74 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQ--VD----EVIMGQVLQAGA-------------------------GQNPARQAALKAG 74 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----eEEEEEecCCCC-------------------------CCcHHHHHHHHcC
Confidence 4689999999999999999999 88 677774321000 0112333555667
Q ss_pred CC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH---------------HHH-H--HH-cccccC
Q psy5222 157 IR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME---------------IQA-F--HA-IGAMGG 215 (415)
Q Consensus 157 l~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~---------------~~~-~--~~-~~~ls~ 215 (415)
+. -|.++++.+|+|++.+|..|+++|++|++|+|||+|+|.+..... ... + .. .+...
T Consensus 75 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 153 (393)
T PRK05790 75 LPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFN- 153 (393)
T ss_pred CCCCCceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccC-
Confidence 74 489999999999999999999999999999999999995421110 000 0 00 00000
Q ss_pred CCCC------------------------------C---C--------C---------------CCccc------C-----
Q psy5222 216 KNFY------------------------------N---F--------P---------------KKTCR------P----- 228 (415)
Q Consensus 216 ~~~~------------------------------~---~--------~---------------~~~~~------p----- 228 (415)
.... . . | +...+ |
T Consensus 154 ~~~~a~~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~ 233 (393)
T PRK05790 154 GYHMGITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLR 233 (393)
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCC
Confidence 0000 0 0 0 00000 1
Q ss_pred --CCC-----CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCc
Q psy5222 229 --FDK-----LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNM 301 (415)
Q Consensus 229 --fd~-----~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~d 301 (415)
||. ..+...++|||+++||++++.|++++.+++++|.|++...... .+...+...+++++|++||++++|
T Consensus 234 ~v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~---~~~~~~~~~a~~~a~~~Agi~~~d 310 (393)
T PRK05790 234 PAFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDP---AIMGIGPVPAIRKALEKAGWSLAD 310 (393)
T ss_pred CccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCC---CccchhHHHHHHHHHHHcCCCHHH
Confidence 111 0145578999999999999999999999999999999875322 122345678999999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCC
Q psy5222 302 IDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA 381 (415)
Q Consensus 302 Id~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~ 381 (415)
||++|+|+..+. .+. ...+.|+-...++++++.+..+||+.||+|+.+++.++.||+..
T Consensus 311 id~~e~~d~f~~----~~l-~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~---------------- 369 (393)
T PRK05790 311 LDLIEINEAFAA----QAL-AVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR---------------- 369 (393)
T ss_pred CCEEEeCcHHHH----HHH-HHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc----------------
Confidence 999999965442 122 22234443334788999999999999999999999999999863
Q ss_pred CcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 382 NFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 382 ~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++++++..+-||..+++|||+
T Consensus 370 ----------~~~~gl~~~~~~~g~g~~~~~e~ 392 (393)
T PRK05790 370 ----------GAKKGLATLCIGGGQGVALIVER 392 (393)
T ss_pred ----------CCCeEEEEEeccCCceeEEEEEc
Confidence 13778899999999999999986
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-25 Score=181.15 Aligned_cols=114 Identities=28% Similarity=0.468 Sum_probs=95.8
Q ss_pred EEEEEeEEeccCC-CCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCC--Ccee
Q psy5222 261 LARLLGGVINLHA-TAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHF--SKLL 335 (415)
Q Consensus 261 ~a~i~g~~~~~~~-~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~--~~~~ 335 (415)
|++|+|+++++|+ .+. ..|+..++.++|+++|+++|++++|||||++||+||+.+|..|..++.++|+... .+++
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 6899999999988 444 8889999999999999999999999999999999999999999999999999753 4699
Q ss_pred eeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCC
Q psy5222 336 LNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLE 374 (415)
Q Consensus 336 v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~ 374 (415)
|++.|+++||++++||++++++++++|++++|||++|++
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~n~~ 119 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHGTIPPTINFE 119 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred eeccccccccccccchHHHHHHHHHHHhcCCCCCCcCCC
Confidence 999999999999999999999999999999999999985
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=203.44 Aligned_cols=271 Identities=13% Similarity=0.050 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHHh-CCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 78 IQTSIIAALQAWYN-SKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 78 ~~l~~~a~~~Al~d-ag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..|+..+++++|++ +|+++++ +| .+|+|........ -..++.+++...|
T Consensus 27 ~~L~~~a~~~al~r~a~i~~~~--Id----~vi~G~~~~~~~~------------------------g~~~ar~~~l~~G 76 (400)
T PRK13359 27 DDLGAVPLKALVERNPDVDWAA--ID----DVIYGCANQAGED------------------------NRNVARMSLLLAG 76 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHH--CC----EEEEEeccccccc------------------------cccHHHHHHHHcC
Confidence 47788899999995 7999998 88 5777733210000 0245678888889
Q ss_pred CC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHH-----HH-------HHc-------ccc-c
Q psy5222 157 IR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQ-----AF-------HAI-------GAM-G 214 (415)
Q Consensus 157 l~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~-----~~-------~~~-------~~l-s 214 (415)
+. -|+++|+..|+||++|+..|++.|++|++|++||+|+|++.....+. .+ ... ..+ .
T Consensus 77 l~~~vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (400)
T PRK13359 77 LPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQ 156 (400)
T ss_pred CCCCCceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCcccc
Confidence 85 49999999999999999999999999999999999999765422100 00 000 000 0
Q ss_pred --CCCCC--------------------------------------CC---------C---------CCccc---------
Q psy5222 215 --GKNFY--------------------------------------NF---------P---------KKTCR--------- 227 (415)
Q Consensus 215 --~~~~~--------------------------------------~~---------~---------~~~~~--------- 227 (415)
....+ .. + +...|
T Consensus 157 ~~~~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~~t~e~l~~ 236 (400)
T PRK13359 157 LYGVDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEALAK 236 (400)
T ss_pred ccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCCCCHHHHhc
Confidence 00000 00 0 00111
Q ss_pred ---CCCCC-----CCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCC
Q psy5222 228 ---PFDKL-----AEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKK 299 (415)
Q Consensus 228 ---pfd~~-----~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~ 299 (415)
.|+.+ .+...++|||+++||++++.|+++|.+++++|.|++..... +.+...+...+++++|+++|+++
T Consensus 237 l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~---p~~~~~~~~~A~~~al~~AGl~~ 313 (400)
T PRK13359 237 LKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVE---PRVMGIGPAPATQKLLARLGMTL 313 (400)
T ss_pred CCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCC---CCccchhHHHHHHHHHHHhCCCH
Confidence 23321 12334799999999999999999999999999999886421 33445677899999999999999
Q ss_pred CcccEEEecCCCCCCCCHHHHHHH--HHHHhcCCCceeeeecccc--cchhHhhHHHHHHHHHHHHhhcCccCCCCCCCC
Q psy5222 300 NMIDYLNTHGSSSPLGDKIEISAI--KEVYKNHFSKLLLNSTKSL--TGHCLYSSGIVEIIASVIQMRKKFIHPNLNLES 375 (415)
Q Consensus 300 ~dId~v~~h~~gt~~~d~~E~~al--~~~~~~~~~~~~v~~~k~~--~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~ 375 (415)
+|||++|+| |..+...+ .+.|+-.....|++..++. +|||.||+|+.+++.++.+|+..
T Consensus 314 ~DID~iei~-------dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~---------- 376 (400)
T PRK13359 314 DQFDVIELN-------EAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLERT---------- 376 (400)
T ss_pred HHcCcCccC-------cHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhhc----------
Confidence 999999977 44444333 3445432124688888886 79999999999999999999751
Q ss_pred CCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 376 PIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 376 ~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++.+++...-||.-.++|||+
T Consensus 377 ----------------~~~~g~~~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 377 ----------------GGRFALCTMCIGVGQGIAIAIER 399 (400)
T ss_pred ----------------CCCeEEEEEcccCCceeEEEEEe
Confidence 13667788888899999999986
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-23 Score=205.22 Aligned_cols=277 Identities=10% Similarity=0.012 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|+|+++++ +| ++++|+...... .....+..++..+|
T Consensus 71 ~~eLa~eA~~~AL~dAgl~~~d--ID----~vv~G~~~~~~~------------------------~~~~~~r~~a~~~G 120 (452)
T PLN02287 71 PDDLLAPVLKAVVEKTGLNPSE--VG----DIVVGTVLAPGS------------------------QRANECRMAAFYAG 120 (452)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeecCccc------------------------ccchHHHHHHHHCC
Confidence 4789999999999999999998 88 577774321110 00122345677889
Q ss_pred CCC--ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHH------HHH----------cccccC---
Q psy5222 157 IRG--EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQA------FHA----------IGAMGG--- 215 (415)
Q Consensus 157 l~G--p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~------~~~----------~~~ls~--- 215 (415)
+.. |.++|+.+|+||+.|+..|+++|++|.+|+|||+|+|.+........ +.. ++....
T Consensus 121 l~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~ 200 (452)
T PLN02287 121 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVA 200 (452)
T ss_pred CCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHH
Confidence 864 88999999999999999999999999999999999996533210000 000 000000
Q ss_pred -CCCC-----------------CCCCC-----cc--------------------------------------c-CCCC--
Q psy5222 216 -KNFY-----------------NFPKK-----TC--------------------------------------R-PFDK-- 231 (415)
Q Consensus 216 -~~~~-----------------~~~~~-----~~--------------------------------------~-pfd~-- 231 (415)
.... ..|.. .. + .|+.
T Consensus 201 ~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g 280 (452)
T PLN02287 201 ERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNG 280 (452)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCC
Confidence 0000 00110 00 0 1110
Q ss_pred ---CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEec
Q psy5222 232 ---LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTH 308 (415)
Q Consensus 232 ---~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h 308 (415)
..+...++|||+++||++++.|++++.+|++++.+++.... . +.+...+...+++++|++||++++|||++|+|
T Consensus 281 ~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~~--~-~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~ 357 (452)
T PLN02287 281 TTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGV--D-PAVMGIGPAVAIPAAVKAAGLELDDIDLFEIN 357 (452)
T ss_pred CEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEEEEeeccC--C-CccchHHHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 02445689999999999999999999999999999875432 1 22334467899999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcc
Q psy5222 309 GSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKS 388 (415)
Q Consensus 309 ~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~ 388 (415)
...+. .|...++ .++-...++++.+.+..+|||.||||+.+++.++++|++.- -
T Consensus 358 daFa~----~~l~~~e-~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~~~---------~------------ 411 (452)
T PLN02287 358 EAFAS----QFVYCCK-KLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRG---------K------------ 411 (452)
T ss_pred chHHH----HHHHHHH-HcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHhcC---------C------------
Confidence 44432 2222222 23322347888999999999999999999999999998520 0
Q ss_pred cccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 389 ISININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 389 ~~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
..++++.....-||+-.++|||+.
T Consensus 412 ---~~~~gl~~~c~ggG~g~a~~ie~~ 435 (452)
T PLN02287 412 ---DCRFGVVSMCIGTGMGAAAVFERG 435 (452)
T ss_pred ---CCCeeEEEEccccCceeEEEEEec
Confidence 025677777788899999999863
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.9e-24 Score=204.53 Aligned_cols=274 Identities=13% Similarity=0.060 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHH-hCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 78 IQTSIIAALQAWY-NSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 78 ~~l~~~a~~~Al~-dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..|+.++++++|+ ++|+++++ +| .+++|....... ....++..++..+|
T Consensus 26 ~~L~~~a~~~al~~~a~i~~~~--Id----~v~~G~~~~~~~------------------------~~~~~ar~~~~~~G 75 (400)
T TIGR02430 26 DDLAAVPIKALLARNPQLDWAA--ID----DVIYGCANQAGE------------------------DNRNVARMAALLAG 75 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHH--CC----EEEEEecccccc------------------------ccccHHHHHHHHcC
Confidence 5889999999999 68999988 87 577773321000 00135567889999
Q ss_pred CC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHH-------H---------------------H
Q psy5222 157 IR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEI-------Q---------------------A 206 (415)
Q Consensus 157 l~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~-------~---------------------~ 206 (415)
+. -|+++|+.+|+||+.|+..|++.|++|++|++||+|+|++...... . .
T Consensus 76 l~~~~p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (400)
T TIGR02430 76 LPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKA 155 (400)
T ss_pred CCCCCceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCccccc
Confidence 96 4999999999999999999999999999999999999976432200 0 0
Q ss_pred -HH-------------Hccc-------------------------------ccCC---C--CCCCCCCccc---------
Q psy5222 207 -FH-------------AIGA-------------------------------MGGK---N--FYNFPKKTCR--------- 227 (415)
Q Consensus 207 -~~-------------~~~~-------------------------------ls~~---~--~~~~~~~~~~--------- 227 (415)
+. +.+. ++.+ + ...+|+...|
T Consensus 156 ~~~~~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~l~ 235 (400)
T TIGR02430 156 LYGVDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLA 235 (400)
T ss_pred ccccCcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHHHh
Confidence 00 0000 0000 0 0001122221
Q ss_pred ----CCCC-----CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q psy5222 228 ----PFDK-----LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLK 298 (415)
Q Consensus 228 ----pfd~-----~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~ 298 (415)
.|+. ..+...++|||+++||++++.|+++|.+++++|+|++...... .+...+...+++++|++||++
T Consensus 236 ~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~---~~~~~~~~~a~~~al~~Agl~ 312 (400)
T TIGR02430 236 KLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEP---RIMGIGPVPATQKLLARAGLS 312 (400)
T ss_pred cCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCC---ccccchHHHHHHHHHHHhCCC
Confidence 1211 1233457999999999999999999999999999998875322 223456789999999999999
Q ss_pred CCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccc--cchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCC
Q psy5222 299 KNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSL--TGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP 376 (415)
Q Consensus 299 ~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~--~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~ 376 (415)
++|||++|+|+..+ .+..+..+.|+-.....|++..++. +|||.||+|+.+++.++.||+..
T Consensus 313 ~~DID~~ei~D~f~-----~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~----------- 376 (400)
T TIGR02430 313 IDQFDVIELNEAFA-----AQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLERS----------- 376 (400)
T ss_pred HHHCCCcccCcHHH-----HHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHhc-----------
Confidence 99999999874433 2333444556642224678888875 79999999999999999999851
Q ss_pred CCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 377 IDNQANFSGKKSISININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 377 ~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+.++.++....-||.-.++|||+.
T Consensus 377 ---------------~~~~g~~~~c~~gG~g~a~~~e~~ 400 (400)
T TIGR02430 377 ---------------GGRYALCTMCIGVGQGIALAIERV 400 (400)
T ss_pred ---------------CCCEEEEEEccccChhhEEEEEeC
Confidence 136677777788899999999863
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.3e-24 Score=205.36 Aligned_cols=275 Identities=11% Similarity=0.061 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+++++||+|+|+++++ +| .+++|+....... + ........+...++
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~d--ID----~vi~g~~~~~~~~--------------------~--~~~~~~~~l~a~~~ 83 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEE--ID----DIITGCALQVGEN--------------------W--LYGGRHPIFLARLP 83 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----eeEEEeecCCCcc--------------------c--ccHHHHHHHHcCCC
Confidence 3689999999999999999999 88 5777743210000 0 00001112233334
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHH-----------HHH-H--HHHcccccCCCCC---
Q psy5222 157 IRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPM-----------EIQ-A--FHAIGAMGGKNFY--- 219 (415)
Q Consensus 157 l~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~-----------~~~-~--~~~~~~ls~~~~~--- 219 (415)
.+-|+++|+.+|+|++.++..|+++|++|.+|++||+|+|.+.... ... . +...... .....
T Consensus 84 ~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~ 162 (394)
T PRK06445 84 YNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLT-TGYVMGLT 162 (394)
T ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCccccc-CCCCHHHH
Confidence 4459999999999999999999999999999999999999543211 000 0 0000000 00000
Q ss_pred ---------------------------C-------------------------CCCCcccC-------------CC----
Q psy5222 220 ---------------------------N-------------------------FPKKTCRP-------------FD---- 230 (415)
Q Consensus 220 ---------------------------~-------------------------~~~~~~~p-------------fd---- 230 (415)
. +|+...|+ |+
T Consensus 163 a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~ 242 (394)
T PRK06445 163 AEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGV 242 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCc
Confidence 1 23222221 11
Q ss_pred -CCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecC
Q psy5222 231 -KLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHG 309 (415)
Q Consensus 231 -~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~ 309 (415)
...+...++|||+++||++++.|++++.+++++|+|++...... .+...+...+++++|+++|++++|||++|+|+
T Consensus 243 lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~---~~~~~~~~~a~~~al~~Agl~~~dId~~e~~d 319 (394)
T PRK06445 243 ITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPP---AIMGKGPVPASKKALEKAGLSVKDIDLWEINE 319 (394)
T ss_pred EecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCC---chhcchHHHHHHHHHHHcCCCHHHcCEEEecc
Confidence 11234557999999999999999999999999999999876432 22345678899999999999999999999998
Q ss_pred CCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCccc
Q psy5222 310 SSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSI 389 (415)
Q Consensus 310 ~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~ 389 (415)
.++. .|...++.+ +-..+++++++....+|||.||+|+.+++.++.+|+.
T Consensus 320 ~f~~----~~l~~~e~l-g~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~------------------------- 369 (394)
T PRK06445 320 AFAV----VVLYAIKEL-GLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQI------------------------- 369 (394)
T ss_pred cchH----HHHHHHHHh-CCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHh-------------------------
Confidence 7763 455555554 2222367888888888999999999999999999981
Q ss_pred ccCCCEEEEeccCcCCceeEEEEee
Q psy5222 390 SININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 390 ~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
...++++.+..+-||+.+++|||+
T Consensus 370 -~~~~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 370 -KGKDYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred -cCCCEEEEEEcccCChhhEEEEEc
Confidence 113678999999999999999985
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-23 Score=203.23 Aligned_cols=272 Identities=13% Similarity=0.070 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCC
Q psy5222 78 IQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNI 157 (415)
Q Consensus 78 ~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 157 (415)
..|+.+|+++||+++|+++++ +| .+++|+.....+. ..++..++..+|+
T Consensus 27 ~eLa~~A~~~aL~~agl~~~d--ID----~vi~g~~~~~~~~-------------------------~~~~~~~~~~~Gl 75 (393)
T PRK08235 27 TELGGIAIKEALERANVSAED--VE----EVIMGTVLQGGQG-------------------------QIPSRQAARAAGI 75 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecccCCCC-------------------------CCHHHHHHHHcCC
Confidence 689999999999999999998 88 6788743210000 1234456788898
Q ss_pred C--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHH-------------HHHHc--ccccCC--C-
Q psy5222 158 R--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQ-------------AFHAI--GAMGGK--N- 217 (415)
Q Consensus 158 ~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~-------------~~~~~--~~ls~~--~- 217 (415)
. -|+++|+.+|+||+.||..|+++|++|.+|++||+|+|.+....... .+... ..+... .
T Consensus 76 ~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (393)
T PRK08235 76 PWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGV 155 (393)
T ss_pred CCCcceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCC
Confidence 4 48999999999999999999999999999999999999654322000 00000 000000 0
Q ss_pred CC------------------------------C--------------------------CCCCcccC-------------
Q psy5222 218 FY------------------------------N--------------------------FPKKTCRP------------- 228 (415)
Q Consensus 218 ~~------------------------------~--------------------------~~~~~~~p------------- 228 (415)
.. . +|+...|+
T Consensus 156 ~~~~~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v 235 (393)
T PRK08235 156 HMGVYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKPV 235 (393)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCCc
Confidence 00 0 13333331
Q ss_pred CC-----CCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCccc
Q psy5222 229 FD-----KLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMID 303 (415)
Q Consensus 229 fd-----~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId 303 (415)
|+ ...+...++|||+++||++++.|++++.+++++|.|++........ .......+++++|+++|++++|||
T Consensus 236 ~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~---~~~~~~~a~~~al~~agl~~~did 312 (393)
T PRK08235 236 FDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKD---FPRTPGYAINALLEKTGKTVEDID 312 (393)
T ss_pred ccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhh---hcchHHHHHHHHHHHhCCCHHHCC
Confidence 11 0123345799999999999999999999999999998765432211 112345899999999999999999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCc
Q psy5222 304 YLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANF 383 (415)
Q Consensus 304 ~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~ 383 (415)
++|+|+..+. ...+..+.|+-...++++.+.+..+|||.||+|+.+++.++.+|+.+-
T Consensus 313 ~~e~~d~f~~-----~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~~----------------- 370 (393)
T PRK08235 313 LFEINEAFAA-----VALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRRG----------------- 370 (393)
T ss_pred eehhcchhHH-----HHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhcC-----------------
Confidence 9999866552 222233445433347889999999999999999999999999998521
Q ss_pred ccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 384 SGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 384 v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
.++.+.+...-||.-.++|||+
T Consensus 371 ---------~~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 371 ---------GGIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred ---------CCeEEEEEcccccceEEEEEEe
Confidence 2446666777788999999986
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-23 Score=202.12 Aligned_cols=274 Identities=13% Similarity=0.085 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|+|+++++ +| .+++|+...... ...++..++..+|
T Consensus 26 ~~eLa~~A~~~AL~~agl~~~d--ID----~vv~g~~~~~~~-------------------------~~~~a~~va~~~G 74 (404)
T PRK06205 26 AEELAATVIRALVERTGIDPAR--ID----DVIFGQGYPNGE-------------------------APAIGRVAALDAG 74 (404)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeccCCCC-------------------------CChHHHHHHHHcC
Confidence 3588999999999999999998 88 677774321110 0134557888899
Q ss_pred CC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHH------H-------HHHHc-----------
Q psy5222 157 IR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEI------Q-------AFHAI----------- 210 (415)
Q Consensus 157 l~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~------~-------~~~~~----------- 210 (415)
+. -|.++|+.+|+|++.||..|+++|++|.+|++||+|+|.+.....+ . .+...
T Consensus 75 l~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (404)
T PRK06205 75 LPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRR 154 (404)
T ss_pred CCCCCceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccc
Confidence 86 3899999999999999999999999999999999999954321100 0 00000
Q ss_pred ----ccc---cCC----CCC-----------------C--------------------------CCCCccc---------
Q psy5222 211 ----GAM---GGK----NFY-----------------N--------------------------FPKKTCR--------- 227 (415)
Q Consensus 211 ----~~l---s~~----~~~-----------------~--------------------------~~~~~~~--------- 227 (415)
..+ +.+ ... . +|+...|
T Consensus 155 ~~~~~~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~ 234 (404)
T PRK06205 155 FPVPGGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLA 234 (404)
T ss_pred cCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHh
Confidence 000 000 000 0 1222221
Q ss_pred ---C-CC--------CCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHc
Q psy5222 228 ---P-FD--------KLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQS 295 (415)
Q Consensus 228 ---p-fd--------~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~A 295 (415)
| |+ ...+...++|||+++||++++.|++.+.+++++|.|++...+.... ...+...+++++|++|
T Consensus 235 ~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~---~~~~~~~a~~~al~~A 311 (404)
T PRK06205 235 KLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSR---MGIGPVPATEKALARA 311 (404)
T ss_pred cCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCcc---ccccHHHHHHHHHHHc
Confidence 1 21 1123345689999999999999999999999999999987553221 2246689999999999
Q ss_pred CCCCCcccEEEecCCCCCCCCHHHHHHHHHH-HhcC-CCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCC
Q psy5222 296 GLKKNMIDYLNTHGSSSPLGDKIEISAIKEV-YKNH-FSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNL 373 (415)
Q Consensus 296 gl~~~dId~v~~h~~gt~~~d~~E~~al~~~-~~~~-~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~ 373 (415)
|++++|||++|+|+..+. .|...++.+ |... ..++++.+.+..+|||.||+|+.+++.++.+|+..
T Consensus 312 gl~~~Did~~ei~d~f~~----~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~-------- 379 (404)
T PRK06205 312 GLTLDDIDLIELNEAFAA----QVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR-------- 379 (404)
T ss_pred CCCHHHCCEeeeccHHHH----HHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc--------
Confidence 999999999999965542 233333322 1221 12588888888899999999999999999999863
Q ss_pred CCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 374 ESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 374 ~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++.+++...-||.-.++|||+
T Consensus 380 ------------------~~~~gl~~~c~~gg~g~a~~~e~ 402 (404)
T PRK06205 380 ------------------QARYGLETMCIGGGQGLAAVFER 402 (404)
T ss_pred ------------------CCCeEEEEEeccCChhhEEEEEe
Confidence 13778888999999999999986
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6e-23 Score=199.61 Aligned_cols=282 Identities=11% Similarity=0.119 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
...+|+.+|+++||+|+|+++++ +|...+|..++.... ...+...+
T Consensus 21 ~~~~La~~A~~~Al~dAGl~~~d--ID~~~~g~~~~~~~~--------------------------------~~~~~~~l 66 (391)
T PRK08256 21 DYPDMAAEAGRAALADAGIDYDA--VQQAYVGYVYGDSTS--------------------------------GQRALYEV 66 (391)
T ss_pred CHHHHHHHHHHHHHHHcCCChHH--CCeeEEEEEeCCcch--------------------------------hHHHHHHc
Confidence 45699999999999999999988 875444443331100 01345678
Q ss_pred CCCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCC-HH--H-------HHHHH-------H-cccccCC
Q psy5222 156 NIRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLS-PM--E-------IQAFH-------A-IGAMGGK 216 (415)
Q Consensus 156 gl~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~-~~--~-------~~~~~-------~-~~~ls~~ 216 (415)
|+++ |.++++.+|+|++.+|..|+++|++|++|+|||+|+|.+.. +. . +..+. . .+.....
T Consensus 67 Gl~~~~~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (391)
T PRK08256 67 GMTGIPIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPAL 146 (391)
T ss_pred CCCCCCCcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccH
Confidence 9988 99999999999999999999999999999999999995421 10 0 00000 0 0000000
Q ss_pred CCC------------------------------CCCCCccc-CCC--------------CCCCCccccceEEEEEeCChh
Q psy5222 217 NFY------------------------------NFPKKTCR-PFD--------------KLAEGFIYGQASAALLIEGNK 251 (415)
Q Consensus 217 ~~~------------------------------~~~~~~~~-pfd--------------~~~~G~~~geGa~alvL~~~~ 251 (415)
... ..|....+ |.+ ...+...++|||+++||.+++
T Consensus 147 ~~~a~~a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~ 226 (391)
T PRK08256 147 RMFGGAGREHMEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEE 226 (391)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHH
Confidence 000 12211110 111 112444579999999999999
Q ss_pred hHHhcCCeeEEEEEeEEeccCCCCC-CC---C---CHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHH
Q psy5222 252 NIKILNKSYLARLLGGVINLHATAS-PE---P---NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIK 324 (415)
Q Consensus 252 ~A~~~g~~i~a~i~g~~~~~~~~~~-~~---~---~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~ 324 (415)
.|++.+.+++++|.|++...+.... .. + .......+++++|+++|++++|||++|+|++++. .|...++
T Consensus 227 ~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f~~----~~l~~le 302 (391)
T PRK08256 227 FARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSA----NELLTYE 302 (391)
T ss_pred HHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccCCcH----HHHHHHH
Confidence 9998876778999998877664332 11 1 1234568999999999999999999999998874 3555554
Q ss_pred HH-HhcCCC--------------ceee--eecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCc
Q psy5222 325 EV-YKNHFS--------------KLLL--NSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKK 387 (415)
Q Consensus 325 ~~-~~~~~~--------------~~~v--~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~ 387 (415)
.+ |..+++ .+|+ ++.--..||+.||+|+.+++++++||+...-. ++.
T Consensus 303 ~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~ag~-----~Qv----------- 366 (391)
T PRK08256 303 ALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTAGA-----RQV----------- 366 (391)
T ss_pred HcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCCcCC-----CcC-----------
Confidence 43 222211 2344 44444459999999999999999999864210 011
Q ss_pred ccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 388 SISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 388 ~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
.+.+++++++.|.+..+...|+++
T Consensus 367 ---~~~~~~l~~~~G~~~~~~~~v~~~ 390 (391)
T PRK08256 367 ---EGARLALQHNLGLGGACVVTLYQR 390 (391)
T ss_pred ---CccceEEEeccccceeEEEEEEec
Confidence 124688999999665666666654
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-23 Score=200.11 Aligned_cols=274 Identities=12% Similarity=0.043 Sum_probs=193.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCC
Q psy5222 78 IQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNI 157 (415)
Q Consensus 78 ~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 157 (415)
..|+.++++++|+|+|+++++ ++ .+++|........ ...++..++...|+
T Consensus 27 ~eL~~~a~~~aL~~agi~~~~--Id----~v~~G~~~~~~~q------------------------~~~~ar~~~l~~Gl 76 (387)
T PRK07850 27 AELLGAVQRAVLDRAGIDPGD--VE----QVIGGCVTQAGEQ------------------------SNNITRTAWLHAGL 76 (387)
T ss_pred HHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeccccccc------------------------cchHHHHHHHhCCC
Confidence 688999999999999999988 87 5777732210000 01234456666888
Q ss_pred C--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHH-HHccccc---CCC---CC---------
Q psy5222 158 R--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAF-HAIGAMG---GKN---FY--------- 219 (415)
Q Consensus 158 ~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~-~~~~~ls---~~~---~~--------- 219 (415)
. -|+++|+++|+||+.|+..|++.|++|++|++||+|+|++......... ...+... ... ..
T Consensus 77 ~~~~p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~~ 156 (387)
T PRK07850 77 PYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAK 156 (387)
T ss_pred CCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHHH
Confidence 5 3899999999999999999999999999999999999976432200000 0000000 000 00
Q ss_pred ---------------------C-----------------------CCCCc---------------------ccCCCC---
Q psy5222 220 ---------------------N-----------------------FPKKT---------------------CRPFDK--- 231 (415)
Q Consensus 220 ---------------------~-----------------------~~~~~---------------------~~pfd~--- 231 (415)
. +|.+. ...|..
T Consensus 157 ~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~~~ 236 (387)
T PRK07850 157 RRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGGIH 236 (387)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCCCc
Confidence 0 11111 122311
Q ss_pred -CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCC
Q psy5222 232 -LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGS 310 (415)
Q Consensus 232 -~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~ 310 (415)
..+...++|||+++||.+++.|++.+.++.++|.|++....... ....+...+++++|+++|++++|||++|+|+.
T Consensus 237 t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~---~~~~~~~~a~~~al~~agl~~~did~~ei~d~ 313 (387)
T PRK07850 237 TAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPY---YHLDGPVQATAKVLEKAGMKIGDIDLVEINEA 313 (387)
T ss_pred cchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCch---hhcchHHHHHHHHHHHcCCCHHHcCeeeeccc
Confidence 11445679999999999999999999888899999987543211 12455678999999999999999999999987
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccc
Q psy5222 311 SSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSIS 390 (415)
Q Consensus 311 gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~ 390 (415)
++. .|...+ +.++-...++++.+..-.+|||.||+|+.++++++.||+++
T Consensus 314 F~~----~~l~~~-e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~------------------------- 363 (387)
T PRK07850 314 FAS----VVLSWA-QVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERT------------------------- 363 (387)
T ss_pred chH----HHHHHH-HHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhc-------------------------
Confidence 773 333333 33443334778888888889999999999999999999852
Q ss_pred cCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 391 ININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 391 ~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
..++.+++..+-||...+++||+.
T Consensus 364 -~~~~g~~~~c~~gg~g~a~~~e~~ 387 (387)
T PRK07850 364 -DKSTALITMCAGGALSTGTIIERI 387 (387)
T ss_pred -CCCeEEEEEccccCceeEEEEEeC
Confidence 136677887888999999999863
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.4e-23 Score=199.27 Aligned_cols=286 Identities=14% Similarity=0.150 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|+|+++++ +| ++++|+........ . .. .+..+...++
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~d--Id----~vi~g~~~~~~~~~--------------------~-~~--~~~~~~~~~g 72 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGD--VD----GIFLGHFNAGFSPQ--------------------D-FP--ASLVLQADPA 72 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEEecCCcccc--------------------c-cc--hhHHHHHhcC
Confidence 4689999999999999999988 77 68887432110000 0 00 0112334456
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHH-H--HHHcc-----cccCCCC---C-----
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQ-A--FHAIG-----AMGGKNF---Y----- 219 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~-~--~~~~~-----~ls~~~~---~----- 219 (415)
++. |.++|+.+|+|++.||..|+++|++|++|.+||+|+|.+....... . ..... ....... .
T Consensus 73 l~~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~ 152 (389)
T PRK07516 73 LRFKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQ 152 (389)
T ss_pred CCCCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHH
Confidence 654 8899999999999999999999999999999999999643211100 0 00000 0000000 0
Q ss_pred -------------------------CCCCCc--------------------ccCCCCCCCCccccceEEEEEeCChhhHH
Q psy5222 220 -------------------------NFPKKT--------------------CRPFDKLAEGFIYGQASAALLIEGNKNIK 254 (415)
Q Consensus 220 -------------------------~~~~~~--------------------~~pfd~~~~G~~~geGa~alvL~~~~~A~ 254 (415)
.+|... ..|+. ..+...++|||+++||++++.|+
T Consensus 153 ~y~~~yg~~~e~~a~vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~-~~d~~~~~DGAaa~il~s~~~a~ 231 (389)
T PRK07516 153 AYFQRYGDQSDALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLR-RTDCSLVSDGAAALVLADAETAR 231 (389)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCc-hhhcCCcCcceEEEEEecHHHHH
Confidence 111110 11222 24556789999999999999998
Q ss_pred hcCCeeEEEEEeEEeccCCCCC--CCC-CHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHH-------
Q psy5222 255 ILNKSYLARLLGGVINLHATAS--PEP-NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIK------- 324 (415)
Q Consensus 255 ~~g~~i~a~i~g~~~~~~~~~~--~~~-~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~------- 324 (415)
+.+. +++|.|++...+.... ..+ ...+...+++++|++||++++|||++|+|++++.. .....+++.
T Consensus 232 ~~~~--~v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~-~~~~~e~lg~~~~G~~ 308 (389)
T PRK07516 232 ALQR--AVRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIA-ELIEYEAMGLAPPGQG 308 (389)
T ss_pred hcCC--CEEEEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHH-HHHHHHHcCCCCCCch
Confidence 8753 6789999988775443 222 34677889999999999999999999999999853 222333321
Q ss_pred -HHHhcC----CCceeeee--cccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEE
Q psy5222 325 -EVYKNH----FSKLLLNS--TKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVM 397 (415)
Q Consensus 325 -~~~~~~----~~~~~v~~--~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 397 (415)
+.+.+. .-.+||+. .--.+|||.||+|+.+++++++||+...- -++. ...++++
T Consensus 309 ~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g~ag-----~rQv--------------~~a~~~l 369 (389)
T PRK07516 309 ARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEAG-----GMQI--------------PGAKLAG 369 (389)
T ss_pred HHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcCCcc-----CCcC--------------Cchheee
Confidence 111110 01234433 33347999999999999999999997521 1111 1246788
Q ss_pred EeccC-cCCceeEEEEee
Q psy5222 398 SNSFG-FSGINSSIILCK 414 (415)
Q Consensus 398 v~s~g-~gG~~~~~vl~~ 414 (415)
+.+.| .+..++.+||++
T Consensus 370 ~~~~gg~~~~~~~~vl~~ 387 (389)
T PRK07516 370 VFNMGGAAVANYVSILER 387 (389)
T ss_pred eeccCcccceEEEEEEEe
Confidence 88877 555667777765
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.5e-23 Score=200.49 Aligned_cols=274 Identities=12% Similarity=0.049 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHHhC-CCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 78 IQTSIIAALQAWYNS-KLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 78 ~~l~~~a~~~Al~da-g~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..|+.+++++||+|+ |+++++ || ++++|...... ... ...+..++..+|
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~d--ID----~vv~g~~~~~~---------------------~~g---~~~~~~~a~~lG 77 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTD--ID----DLMLGCGLPGG---------------------EQG---FNMARVVAVLLG 77 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHH--CC----EEEEEcccccc---------------------ccc---CCHHHHHHHHcC
Confidence 688999999999997 999999 88 67777321000 000 123457899999
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHH-------------HHH---------------HH
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPM-------------EIQ---------------AF 207 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~-------------~~~---------------~~ 207 (415)
+.+ |.++++.+|+||+.+|..|+++|++|.+|++||+|+|.+.... .+. .+
T Consensus 78 l~~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (406)
T PRK07851 78 YDFLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAW 157 (406)
T ss_pred CCCCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhcccccccccccccccc
Confidence 976 8899999999999999999999999999999999988532110 000 00
Q ss_pred HH-ccc-ccCCCC---------------C--------------------CCC-------------------CCccc-CCC
Q psy5222 208 HA-IGA-MGGKNF---------------Y--------------------NFP-------------------KKTCR-PFD 230 (415)
Q Consensus 208 ~~-~~~-ls~~~~---------------~--------------------~~~-------------------~~~~~-pfd 230 (415)
.. .+. ...... . ..+ +...| +++
T Consensus 158 ~~~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~~t 237 (406)
T PRK07851 158 HDPREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAGTT 237 (406)
T ss_pred cccccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCCcC
Confidence 00 000 000000 0 011 00111 011
Q ss_pred ------------C-----CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHH
Q psy5222 231 ------------K-----LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLK 293 (415)
Q Consensus 231 ------------~-----~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~ 293 (415)
. ..+...++||++++||++++.|++++.+++++|+|++...... .+...+...+++++|+
T Consensus 238 ~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~---~~~~~~~~~a~~~al~ 314 (406)
T PRK07851 238 YEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSP---EIMGLGPVEASKQALA 314 (406)
T ss_pred HHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCC---CccchhHHHHHHHHHH
Confidence 0 1244457999999999999999999999999999999865432 2233457899999999
Q ss_pred HcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCC
Q psy5222 294 QSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNL 373 (415)
Q Consensus 294 ~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~ 373 (415)
+||++++|||++|+|+..+. .|...++. ++-...++++++.+..+||+.|++|+.+++.++++|+++
T Consensus 315 ~Agi~~~did~~ei~d~f~~----~~l~~le~-lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~-------- 381 (406)
T PRK07851 315 RAGMSIDDIDLVEINEAFAA----QVLPSARE-LGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTH-------- 381 (406)
T ss_pred HhCCCHHHCCeehhhhHHHH----HHHHHHHH-hCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhc--------
Confidence 99999999999999855542 23333322 332223788899999999999999999999999999752
Q ss_pred CCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 374 ESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 374 ~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+.++.++...+-||+..++|||+.
T Consensus 382 ------------------~~~~g~~~~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 382 ------------------DKTFGLETMCVGGGQGMAMVLERL 405 (406)
T ss_pred ------------------CCCeEEEEEccccChhhEEEEEec
Confidence 136788888899999999999963
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-23 Score=201.56 Aligned_cols=272 Identities=14% Similarity=0.128 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCC
Q psy5222 78 IQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNI 157 (415)
Q Consensus 78 ~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 157 (415)
..|+.+++++||+|+|+++++ +| .+++|+...... ...++...+..+|+
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~d--ID----~vi~G~~~~~~~-------------------------~~~~~~~~~l~ag~ 80 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQ--ID----EVVMGCVLPAGQ-------------------------GQAPARQAALGAGL 80 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHH--cC----EEEEEecCCCcc-------------------------chHHHHHHHHcCCC
Confidence 689999999999999999998 87 577774321000 01223334444555
Q ss_pred --CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCC-HH--H-------------HHHH--HHc-ccccCC
Q psy5222 158 --RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLS-PM--E-------------IQAF--HAI-GAMGGK 216 (415)
Q Consensus 158 --~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~-~~--~-------------~~~~--~~~-~~ls~~ 216 (415)
+-|+++|+.+|+||+.|+..|+++|++|++|++||+|+|.+.. +. . ...+ ... ..+...
T Consensus 81 ~~~~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (397)
T PRK06954 81 PLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKG 160 (397)
T ss_pred CCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccC
Confidence 3478999999999999999999999999999999999996542 11 0 0000 000 000000
Q ss_pred CCC------------------------------C-CCCCcc----cC--------------------------------C
Q psy5222 217 NFY------------------------------N-FPKKTC----RP--------------------------------F 229 (415)
Q Consensus 217 ~~~------------------------------~-~~~~~~----~p--------------------------------f 229 (415)
..+ . .+.+.. .| |
T Consensus 161 ~~~~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~~f 240 (397)
T PRK06954 161 RLMGTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKPAF 240 (397)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCCcc
Confidence 000 0 011000 01 1
Q ss_pred CC-----CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccE
Q psy5222 230 DK-----LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDY 304 (415)
Q Consensus 230 d~-----~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~ 304 (415)
+. ..+...++|||+++||++++.|++++.+++++|.|++....... ....+...+++++|+++|++++|||+
T Consensus 241 ~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~---~~~~~~~~a~~~al~~agl~~~Did~ 317 (397)
T PRK06954 241 SKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPS---KFTTAPVGAIRKLFEKNGWRAAEVDL 317 (397)
T ss_pred CCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCcc---cccchHHHHHHHHHHHcCCCHHHCCE
Confidence 11 11234479999999999999999999999999999876433211 12235578999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcc
Q psy5222 305 LNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFS 384 (415)
Q Consensus 305 v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v 384 (415)
+|+|..++. .|...++.+ +-...++++++.+..+|||.||+|+.+++.++++|+.. .
T Consensus 318 ~ei~d~fa~----~~l~~~e~l-g~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~----------~-------- 374 (397)
T PRK06954 318 FEINEAFAV----VTMAAMKEH-GLPHEKVNVNGGACALGHPIGASGARILVTLIGALRAR----------G-------- 374 (397)
T ss_pred EehhhHHHH----HHHHHHHHh-CCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhc----------C--------
Confidence 999966653 344444443 22223788999999999999999999999999999852 1
Q ss_pred cCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 385 GKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 385 ~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
.++.+.+...-||.-+++|||+
T Consensus 375 --------g~~~v~~~c~~gg~g~a~~~e~ 396 (397)
T PRK06954 375 --------GKRGVASLCIGGGEATAMGIEL 396 (397)
T ss_pred --------CCeEEEEEccccchhhEEEEEe
Confidence 2456677777889999999985
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.2e-23 Score=199.63 Aligned_cols=272 Identities=14% Similarity=0.061 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCC
Q psy5222 78 IQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNI 157 (415)
Q Consensus 78 ~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 157 (415)
..|+.+++++||+|+|+++++ +| ++++|....... . ...+..++..+|+
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~--ID----~vv~g~~~~~~~----------------------~---~~~~~~~~~~~Gl 74 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPAL--VQ----EVFFGNVLSANL----------------------G---QAPARQAALGAGL 74 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecCcCCc----------------------C---CcHHHHHHHhcCC
Confidence 688999999999999999998 88 677773211000 0 0123457788888
Q ss_pred C--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHH-------------HHHHHc--ccccCC-C--
Q psy5222 158 R--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEI-------------QAFHAI--GAMGGK-N-- 217 (415)
Q Consensus 158 ~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~-------------~~~~~~--~~ls~~-~-- 217 (415)
. -|..+|+.+|+|++.+|..|+++|++|++|++||+|+|.+...... ..+... ..+... .
T Consensus 75 ~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (394)
T PLN02644 75 PPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDF 154 (394)
T ss_pred CCCCceEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCC
Confidence 5 3788899999999999999999999999999999998854311000 000000 000000 0
Q ss_pred CC--------------------------------CCCC---------------Cc---------------ccC-------
Q psy5222 218 FY--------------------------------NFPK---------------KT---------------CRP------- 228 (415)
Q Consensus 218 ~~--------------------------------~~~~---------------~~---------------~~p------- 228 (415)
.. ..+. +. ..|
T Consensus 155 ~~~~~A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~ 234 (394)
T PLN02644 155 GMGVCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPS 234 (394)
T ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCc
Confidence 00 0000 00 000
Q ss_pred CC------CCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcc
Q psy5222 229 FD------KLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMI 302 (415)
Q Consensus 229 fd------~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dI 302 (415)
|. ...+...++||++++||++++.|++++.+++++|+|++...+.... .......+++++|+++|++++||
T Consensus 235 f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~---~~~~~~~a~~~al~~Agi~~~Di 311 (394)
T PLN02644 235 FKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPEL---FTTAPALAIPKALKHAGLEASQV 311 (394)
T ss_pred ccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcc---cchhHHHHHHHHHHHcCCCHHHC
Confidence 10 0123556799999999999999999999999999999987654211 12233569999999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC
Q psy5222 303 DYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN 382 (415)
Q Consensus 303 d~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~ 382 (415)
|++|+|+.++. ......+.|+-...++++++.+..+||+.||+|+.++++++.+|+.. .
T Consensus 312 d~~Ei~d~f~~-----~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~----------~------ 370 (394)
T PLN02644 312 DYYEINEAFSV-----VALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSK----------N------ 370 (394)
T ss_pred CEEEeCcHHHH-----HHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhc----------C------
Confidence 99999855542 22333345554334788888999999999999999999999999853 1
Q ss_pred cccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 383 FSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 383 ~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
.++.+....+-||...++|||+
T Consensus 371 ----------~~~g~~~~~~~gg~g~a~~~e~ 392 (394)
T PLN02644 371 ----------GKYGVAGICNGGGGASAIVVEL 392 (394)
T ss_pred ----------CCeEEEEEeccCCceeEEEEEe
Confidence 2467777777889999999986
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.8e-23 Score=196.56 Aligned_cols=275 Identities=14% Similarity=0.093 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHHh-CCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 78 IQTSIIAALQAWYN-SKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 78 ~~l~~~a~~~Al~d-ag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..|+.+++++||++ +|+++++ +| .+++|....... .. ..++..++...|
T Consensus 26 ~~L~~~a~~~al~~~agl~~~~--Id----~v~~G~~~~~~~----------------------~g--~~~ar~~~~~~g 75 (385)
T TIGR02445 26 EDLSAHLMSKLLARNPKVDPAE--VE----DIYWGCVQQTLE----------------------QG--FNIARNAALLAQ 75 (385)
T ss_pred HHHHHHHHHHHHHhccCCCHHH--cC----EEEEeccccccc----------------------cc--chHHHHHHHHCC
Confidence 68999999999995 6999998 88 688873321000 00 124445555666
Q ss_pred CC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHH------HHHHH--------cccccC----C
Q psy5222 157 IR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEI------QAFHA--------IGAMGG----K 216 (415)
Q Consensus 157 l~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~------~~~~~--------~~~ls~----~ 216 (415)
+- -|+++|+.+|+||+.|+..|++.|++|++|++||+|+|++...... ..+.. ++...+ +
T Consensus 76 ~~~~~p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 155 (385)
T TIGR02445 76 IPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKM 155 (385)
T ss_pred CCCCcchhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHHH
Confidence 53 4779999999999999999999999999999999999965422110 00000 000000 0
Q ss_pred CC-------------------------CCC------------------CCCcccC-------------CCC------CCC
Q psy5222 217 NF-------------------------YNF------------------PKKTCRP-------------FDK------LAE 234 (415)
Q Consensus 217 ~~-------------------------~~~------------------~~~~~~p-------------fd~------~~~ 234 (415)
.. .++ |+...|+ |+. ..+
T Consensus 156 ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~ 235 (385)
T TIGR02445 156 HGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAGT 235 (385)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceeccc
Confidence 00 001 3333321 221 134
Q ss_pred CccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCC
Q psy5222 235 GFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPL 314 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~ 314 (415)
...++||++++||++++.|++++.+++++|+|++........ ...+...+++++|+++|++++|||++|+|+.++.
T Consensus 236 ~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~~---~~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~- 311 (385)
T TIGR02445 236 SSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSI---MGYGPVPATQKALKRAGLSISDIDVFELNEAFAA- 311 (385)
T ss_pred CCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCcc---cchhHHHHHHHHHHHcCCCHHHcCEEEEccccHH-
Confidence 455799999999999999999999999999999987432221 2235578999999999999999999999987763
Q ss_pred CCHHHHHHHHHH-HhcC-CCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccC
Q psy5222 315 GDKIEISAIKEV-YKNH-FSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISIN 392 (415)
Q Consensus 315 ~d~~E~~al~~~-~~~~-~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~ 392 (415)
.|...++.+ |... ..++++.+..-.+|||.||+|+..++.++..|++ . +
T Consensus 312 ---~~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~-----------~---------------~ 362 (385)
T TIGR02445 312 ---QALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQ-----------K---------------D 362 (385)
T ss_pred ---HHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh-----------c---------------C
Confidence 345444443 2122 1367777777778999999999999888866553 1 1
Q ss_pred CCEEEEeccCcCCceeEEEEeeC
Q psy5222 393 INNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 393 ~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
.++.+..+.+=||.-.++|||+.
T Consensus 363 ~~~Gl~~~~~g~g~g~a~~~e~~ 385 (385)
T TIGR02445 363 ATFGLATMCIGLGQGIATVFERV 385 (385)
T ss_pred CCeEEEEEecccChhheEEEEeC
Confidence 36788888888999999999863
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.1e-23 Score=197.43 Aligned_cols=272 Identities=14% Similarity=0.077 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHHH-hCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 77 FIQTSIIAALQAWY-NSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 77 ~~~l~~~a~~~Al~-dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
...|+..+++++|+ ++|+++++ +| .+++|........ ...++..++...
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~--Id----~v~~G~~~~~~~~------------------------~~~~ar~~~~~~ 75 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEA--VD----DVIYGCANQAGED------------------------NRNVARMSALLA 75 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHH--CC----EEEEEeccccccc------------------------cchHHHHHHHHc
Confidence 35889999999999 68999988 87 5777733210000 013556788999
Q ss_pred CCC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHH-----HHH-------HH------c-cccc
Q psy5222 156 NIR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEI-----QAF-------HA------I-GAMG 214 (415)
Q Consensus 156 gl~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~-----~~~-------~~------~-~~ls 214 (415)
|+. -|+++|+.+|+||+.|+..|++.|++|++|++||+|+|++...... ..+ +. . ..+.
T Consensus 76 Gl~~~vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (401)
T PRK09050 76 GLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMK 155 (401)
T ss_pred CCCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccc
Confidence 993 4999999999999999999999999999999999999976532200 000 00 0 0000
Q ss_pred C-CC--CC---------------------------------CC-----------------------CCCcccC-------
Q psy5222 215 G-KN--FY---------------------------------NF-----------------------PKKTCRP------- 228 (415)
Q Consensus 215 ~-~~--~~---------------------------------~~-----------------------~~~~~~p------- 228 (415)
. .. .+ .+ ++...|+
T Consensus 156 ~~~~~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~l 235 (401)
T PRK09050 156 AQYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEAL 235 (401)
T ss_pred cccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHHH
Confidence 0 00 00 11 1222221
Q ss_pred ------CCC-----CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCC
Q psy5222 229 ------FDK-----LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGL 297 (415)
Q Consensus 229 ------fd~-----~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl 297 (415)
|+. ..+...++|||+++||++++.|++++.+++++|+|++....... ....+...+++++|++||+
T Consensus 236 ~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~---~~~~~~~~a~~~al~~Agl 312 (401)
T PRK09050 236 AKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPR---IMGIGPAPATRKLLARLGL 312 (401)
T ss_pred hcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCc---cccchHHHHHHHHHHHcCC
Confidence 221 12334579999999999999999999999999999988754322 2234567899999999999
Q ss_pred CCCcccEEEecCCCCCCCCHHHHHHHH--HHHhcCCCceeeeecccc--cchhHhhHHHHHHHHHHHHhhcCccCCCCCC
Q psy5222 298 KKNMIDYLNTHGSSSPLGDKIEISAIK--EVYKNHFSKLLLNSTKSL--TGHCLYSSGIVEIIASVIQMRKKFIHPNLNL 373 (415)
Q Consensus 298 ~~~dId~v~~h~~gt~~~d~~E~~al~--~~~~~~~~~~~v~~~k~~--~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~ 373 (415)
+++|||++|+|+ ..+...+. +.|+-.....|++..++. +|||.||+|+.+++.++.+|+.+
T Consensus 313 ~~~DId~~ei~D-------~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~-------- 377 (401)
T PRK09050 313 TIDQFDVIELNE-------AFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERT-------- 377 (401)
T ss_pred CHHHCCccccCc-------HhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhc--------
Confidence 999999999884 44443332 334432124678878876 79999999999999999999851
Q ss_pred CCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 374 ESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 374 ~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++.+++...-||.-.++|+|+
T Consensus 378 ------------------~~~~g~~~~c~~gG~g~a~~~e~ 400 (401)
T PRK09050 378 ------------------GGRYALCTMCIGVGQGIALAIER 400 (401)
T ss_pred ------------------CCCeEEEEEcccccceeEEEEEe
Confidence 13677888888899999999986
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=196.52 Aligned_cols=275 Identities=15% Similarity=0.066 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHHh-CCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 78 IQTSIIAALQAWYN-SKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 78 ~~l~~~a~~~Al~d-ag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..|+..++++||++ +|+++++ +| .+++|....... . ...++.+++...|
T Consensus 28 ~~L~~~~~~~al~~~agl~~~~--Id----~vi~g~~~~~~~----------------------~--g~~~ar~~~~~~G 77 (387)
T PRK08947 28 EDLSAHLMRSLLARNPALDPAE--ID----DIIWGCVQQTLE----------------------Q--GFNIARNAALLAG 77 (387)
T ss_pred HHHHHHHHHHHHHhccCcChHH--hC----eEEEEecccccc----------------------c--cccHHHHHHHHcC
Confidence 68889999999995 8999988 87 577773211000 0 0123446778888
Q ss_pred CC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH-------------------HHHH------HH
Q psy5222 157 IR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME-------------------IQAF------HA 209 (415)
Q Consensus 157 l~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~-------------------~~~~------~~ 209 (415)
+. -|+++|+.+|+||+.|+..|+++|++|++|++||+|+|++..... ...+ .+
T Consensus 78 l~~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 157 (387)
T PRK08947 78 IPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGKM 157 (387)
T ss_pred CCCCCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHHHH
Confidence 85 377999999999999999999999999999999999996543210 0000 00
Q ss_pred cc------------------------cccC----------CCC--CCCCCCccc-------------CCCC------CCC
Q psy5222 210 IG------------------------AMGG----------KNF--YNFPKKTCR-------------PFDK------LAE 234 (415)
Q Consensus 210 ~~------------------------~ls~----------~~~--~~~~~~~~~-------------pfd~------~~~ 234 (415)
.+ .+.. +.. .-+|+...| .|+. ..+
T Consensus 158 ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~ 237 (387)
T PRK08947 158 HGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAGT 237 (387)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEccc
Confidence 00 0000 000 000122221 1121 234
Q ss_pred CccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCC
Q psy5222 235 GFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPL 314 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~ 314 (415)
...++|||+++||++++.|++.+.+++++|.|++.+...... ...+...+++++|+++|++++|||++|+|+.++.
T Consensus 238 ~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~---~~~~~~~a~~~al~~Agl~~~DId~~El~d~F~~- 313 (387)
T PRK08947 238 SSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSI---MGYGPVPATQKALKRAGLSISDIDVFELNEAFAA- 313 (387)
T ss_pred cCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCccc---ccccHHHHHHHHHHHcCCCHHHCCEEEecccchH-
Confidence 456899999999999999999999999999999987432221 1223578899999999999999999999988773
Q ss_pred CCHHHHHHHHHH-HhcC-CCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccC
Q psy5222 315 GDKIEISAIKEV-YKNH-FSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISIN 392 (415)
Q Consensus 315 ~d~~E~~al~~~-~~~~-~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~ 392 (415)
.|...++.+ |... ..++++.+..-.+|||.||+|+.+++.++.+|+. . +
T Consensus 314 ---~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~-----------~---------------~ 364 (387)
T PRK08947 314 ---QSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER-----------K---------------D 364 (387)
T ss_pred ---HHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh-----------c---------------C
Confidence 355555443 2222 1367778887888999999999999999999986 1 1
Q ss_pred CCEEEEeccCcCCceeEEEEeeC
Q psy5222 393 INNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 393 ~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
.++++.++.+=||...++||+++
T Consensus 365 ~~~gl~~~~~g~G~g~a~~~e~~ 387 (387)
T PRK08947 365 AQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_pred CCEEEEEEeecccceeEEEEEeC
Confidence 36788888887788888888863
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-23 Score=200.52 Aligned_cols=273 Identities=15% Similarity=0.105 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCC
Q psy5222 78 IQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNI 157 (415)
Q Consensus 78 ~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 157 (415)
..|+.+++++||+|+|+++++ +| .+++|........ ...++.+++...|+
T Consensus 27 ~eL~~~a~~~al~~agi~~~~--Id----~v~~G~~~~~~~~------------------------~~~~ar~~~~~~Gl 76 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPGDD--IE----DVILGCTNQAGED------------------------SRNVARNALLLAGL 76 (401)
T ss_pred HHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeccccccc------------------------cccHHHHHHHhcCC
Confidence 588999999999999999988 88 5777743210000 01234457778888
Q ss_pred C--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHH------------HHHHH-cc-------c---
Q psy5222 158 R--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEI------------QAFHA-IG-------A--- 212 (415)
Q Consensus 158 ~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~------------~~~~~-~~-------~--- 212 (415)
. -|.++|+.+|+||+.|+..|++.|++|++|++||+|+|++...... ..+.. .+ .
T Consensus 77 p~~~p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (401)
T PRK08131 77 PVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQ 156 (401)
T ss_pred CCCCceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccc
Confidence 5 4899999999999999999999999999999999999965432110 00010 00 0
Q ss_pred ccC------------CCCC--------------------CCC--CCcccC-------------CCC--------------
Q psy5222 213 MGG------------KNFY--------------------NFP--KKTCRP-------------FDK-------------- 231 (415)
Q Consensus 213 ls~------------~~~~--------------------~~~--~~~~~p-------------fd~-------------- 231 (415)
... +... ..+ .....| ++.
T Consensus 157 ~a~~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L~ 236 (401)
T PRK08131 157 YGNDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALT 236 (401)
T ss_pred cccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHHh
Confidence 000 0000 000 000001 110
Q ss_pred ------------CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCC
Q psy5222 232 ------------LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKK 299 (415)
Q Consensus 232 ------------~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~ 299 (415)
..+...++|||+++||++++.|++++.+++++|.|++...+... ....+...+++++|+++|+++
T Consensus 237 ~l~p~f~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~---~~~~~~~~a~~~a~~~agl~~ 313 (401)
T PRK08131 237 KLKPLFEGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPR---IMGIGPVEAIKKALARAGLTL 313 (401)
T ss_pred cCCCCCCCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCc---cccchHHHHHHHHHHHcCCCH
Confidence 01455689999999999999999999999999999998765322 223466899999999999999
Q ss_pred CcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeeccc--ccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCC
Q psy5222 300 NMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKS--LTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPI 377 (415)
Q Consensus 300 ~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~--~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~ 377 (415)
+|||++|+|+.++. .|...++ .++-.....|++...+ .+|||.||+|+.+++.++++|+..-
T Consensus 314 ~did~~ei~d~Fa~----~~l~~~e-~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~~~----------- 377 (401)
T PRK08131 314 DDMDIIEINEAFAS----QVLGCLK-GLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRRG----------- 377 (401)
T ss_pred HHCCeehhccHHHH----HHHHHHH-HcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHhcC-----------
Confidence 99999999966553 1222222 2232111245554554 5699999999999999999998630
Q ss_pred CCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 378 DNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 378 ~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
.++.++....-||...++|||+
T Consensus 378 ---------------~~~~~~~~~~ggg~g~a~i~e~ 399 (401)
T PRK08131 378 ---------------KRYAVVSLCIGVGQGLAMVIER 399 (401)
T ss_pred ---------------CCceEEEEEecCChhhEEEEEe
Confidence 0223344445567778888875
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-22 Score=195.17 Aligned_cols=252 Identities=15% Similarity=0.183 Sum_probs=179.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..+|+.+|+++||+|+|+++++ +| ++++++...... ...++..++..+|
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~--Id----~vi~g~~~~~~~-------------------------~~~~a~~va~~lG 64 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPAD--ID----AVVVGNAAGGRF-------------------------QSFPGALIAEYLG 64 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEeccccccc-------------------------ccchHHHHHHHcC
Confidence 4689999999999999999887 76 677774321100 1235678999999
Q ss_pred CC-CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHH---------HH---HcccccCCCCC----
Q psy5222 157 IR-GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQA---------FH---AIGAMGGKNFY---- 219 (415)
Q Consensus 157 l~-Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~---------~~---~~~~ls~~~~~---- 219 (415)
+. .|.++++.+|+|++.+|..|+++|++|++|++||+|+|.+........ +. ..+.+.....+
T Consensus 65 l~~~~~~~v~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a 144 (375)
T cd00829 65 LLGKPATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAA 144 (375)
T ss_pred CCCcceeeEeCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHH
Confidence 94 589999999999999999999999999999999999995443210000 00 00000000000
Q ss_pred --------------------------CCCCCc----------------ccCCCCCCCCccccceEEEEEeCChhhHHhcC
Q psy5222 220 --------------------------NFPKKT----------------CRPFDKLAEGFIYGQASAALLIEGNKNIKILN 257 (415)
Q Consensus 220 --------------------------~~~~~~----------------~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g 257 (415)
..|... +.|+.. .+...++||++++||++++.|+++
T Consensus 145 ~~~~~~~g~t~e~~~~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl~~-~~~~~~~DGaaa~vl~s~~~a~~~- 222 (375)
T cd00829 145 RRYMHRYGTTREDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLRL-LDCCPVSDGAAAVVLASEERAREL- 222 (375)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCch-hhcCCCCCceeEEEEecHHHHhhc-
Confidence 111111 112222 455678999999999999999988
Q ss_pred CeeEEEEEeEEeccCCCCCCC----CCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHH-HhcCCC
Q psy5222 258 KSYLARLLGGVINLHATASPE----PNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEV-YKNHFS 332 (415)
Q Consensus 258 ~~i~a~i~g~~~~~~~~~~~~----~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~-~~~~~~ 332 (415)
.+++++|.|++...+...... ....+...+++++|++||++++|||++|+|++++. .+...++.+ |..+.+
T Consensus 223 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~----~~l~~~e~lGl~~~g~ 298 (375)
T cd00829 223 TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTI----AELLALEDLGFCEKGE 298 (375)
T ss_pred CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH----HHHHHHHHcCCCCCCc
Confidence 677899999999887766522 24677889999999999999999999999999884 344444433 222211
Q ss_pred ----------------ceeeeecccccchhHhhHHHHHHHHHHHHhhcC
Q psy5222 333 ----------------KLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKK 365 (415)
Q Consensus 333 ----------------~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~ 365 (415)
++++.+.-...||+.|++|+.+++.+++||+..
T Consensus 299 ~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~ 347 (375)
T cd00829 299 GGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGE 347 (375)
T ss_pred hHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCC
Confidence 344444444469999999999999999999864
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-22 Score=194.89 Aligned_cols=273 Identities=14% Similarity=0.106 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..+|+.+++++||+|+|+++++ +| ++++|....... ...++..++..+|
T Consensus 26 ~~~L~~~a~~~al~dagi~~~d--ID----~vi~g~~~~~~~-------------------------~~~~a~~~~~~~G 74 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPAL--VQ----EVIMGNVIQAGV-------------------------GQNPAGQAAYHAG 74 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecCCCCc-------------------------cCcHHHHHHHHCC
Confidence 4579999999999999999999 88 688773211000 0122456788899
Q ss_pred CCC--ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH-----H------H-----HHHH----ccccc
Q psy5222 157 IRG--EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME-----I------Q-----AFHA----IGAMG 214 (415)
Q Consensus 157 l~G--p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~-----~------~-----~~~~----~~~ls 214 (415)
+.. |.++++.+|+||+.|+..|+++|++|++|++||+|+|++..... . . .+.. .+...
T Consensus 75 l~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 154 (388)
T PRK06366 75 LPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLID 154 (388)
T ss_pred CCCCCcceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccc
Confidence 964 99999999999999999999999999999999999996431100 0 0 0000 00000
Q ss_pred CCCC--C------------------------------CCCCC-cc----cCC------------------------C---
Q psy5222 215 GKNF--Y------------------------------NFPKK-TC----RPF------------------------D--- 230 (415)
Q Consensus 215 ~~~~--~------------------------------~~~~~-~~----~pf------------------------d--- 230 (415)
.... + ..|.. .. .|+ +
T Consensus 155 ~~~~~~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~g 234 (388)
T PRK06366 155 AFYFEHMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKNG 234 (388)
T ss_pred cccCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCCC
Confidence 0000 0 11221 11 111 1
Q ss_pred --CCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEec
Q psy5222 231 --KLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTH 308 (415)
Q Consensus 231 --~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h 308 (415)
...+...++|||+++||.+++.|++.+.++.++|+|++......... ......+++++|++||++++|||++|+|
T Consensus 235 ~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~---~~~~~~A~~~al~~Agl~~~DiDv~Ei~ 311 (388)
T PRK06366 235 ILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDF---VEAPIPATRKLLEKQNKSIDYYDLVEHN 311 (388)
T ss_pred CEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHh---cccHHHHHHHHHHHcCCCHHHcceeecc
Confidence 01233446999999999999999999988888999998875422211 1123689999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcc
Q psy5222 309 GSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKS 388 (415)
Q Consensus 309 ~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~ 388 (415)
+.++. .|...++.+ +-+.+++++.+..-.+|||.||+|+.+++.++.+|+..
T Consensus 312 daFa~----~~l~~le~l-gl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~----------------------- 363 (388)
T PRK06366 312 EAFSI----ASIIVRDQL-KIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTR----------------------- 363 (388)
T ss_pred chhHH----HHHHHHHHh-CCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhc-----------------------
Confidence 87774 344444443 32333667666666679999999999999999999852
Q ss_pred cccCCCEEEEeccCcCCceeEEEEee
Q psy5222 389 ISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 389 ~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++.+.....-||.-.++|||+
T Consensus 364 ---~~~~g~~~~c~~gg~g~a~~~e~ 386 (388)
T PRK06366 364 ---HMKTGLATLCHGGGGAHTLTLEM 386 (388)
T ss_pred ---CCCeEEEEEecccChhhEEEEEe
Confidence 12567777777889999999885
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.2e-22 Score=190.75 Aligned_cols=285 Identities=14% Similarity=0.120 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|||+++++ +| ++++++.. +.. ... ..++..++..+|
T Consensus 24 ~~eL~~eAa~~Al~dAgl~~~d--ID----~iv~~~~~---~~~-------------------~~~--~~~~~~va~~LG 73 (386)
T PRK08313 24 MAGLVREAIDRALADAGLTWDD--ID----AVVVGKAP---DFF-------------------EGV--MMPELFLADALG 73 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEeccc---ccc-------------------ccc--cCchHHHHHhcC
Confidence 3689999999999999999998 87 67776421 000 000 012247889999
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH--------------------HHH------HHH
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME--------------------IQA------FHA 209 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~--------------------~~~------~~~ 209 (415)
++. |.+.++++|+++..++..|+++|++|.+|.|||+|+|...+... +.. +..
T Consensus 74 l~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~ 153 (386)
T PRK08313 74 ATGKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRR 153 (386)
T ss_pred CCCCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHH
Confidence 976 88899999999999999999999999999999999984322100 000 001
Q ss_pred cccccC-------C---CCCCCCCCccc-C-CC--------------CCCCCccccceEEEEEeCChhhHHhcCCeeEEE
Q psy5222 210 IGAMGG-------K---NFYNFPKKTCR-P-FD--------------KLAEGFIYGQASAALLIEGNKNIKILNKSYLAR 263 (415)
Q Consensus 210 ~~~ls~-------~---~~~~~~~~~~~-p-fd--------------~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~ 263 (415)
.|...+ + +...+|....+ | ++ +.-+...++|||+++||.+++.|++.+.++.++
T Consensus 154 ~G~~~e~la~vav~~~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~ 233 (386)
T PRK08313 154 SGAPEHIGAMVAVKDRLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAW 233 (386)
T ss_pred HCcCHHHHHHHHHHHHHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeE
Confidence 111000 0 00012222111 1 21 123556689999999999999998877778889
Q ss_pred EEeEEeccCCCCC---CCCCHHHHHHHHHHHHHHcCCC--CCcccEEEecCCCCCCCCHHHHHHHHHH-HhcCC------
Q psy5222 264 LLGGVINLHATAS---PEPNLNNEISVMNSVLKQSGLK--KNMIDYLNTHGSSSPLGDKIEISAIKEV-YKNHF------ 331 (415)
Q Consensus 264 i~g~~~~~~~~~~---~~~~~~~~~~~~~~aL~~Agl~--~~dId~v~~h~~gt~~~d~~E~~al~~~-~~~~~------ 331 (415)
|+|++..++.... ..........+++++|++||++ ++|||++|+|++++. .|...++.+ |..++
T Consensus 234 I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~----~~~~~~e~lGl~~~G~~~~~~ 309 (386)
T PRK08313 234 IHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSW----FEPMWLENLGFAPEGEGWKLT 309 (386)
T ss_pred EEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChH----HHHHHHHHcCCCCCCchHHHH
Confidence 9999987765433 2223466778999999999998 699999999999884 344444433 22110
Q ss_pred --------Cceeeeeccccc-chhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccC
Q psy5222 332 --------SKLLLNSTKSLT-GHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFG 402 (415)
Q Consensus 332 --------~~~~v~~~k~~~-Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g 402 (415)
-++||+..-+.+ ||+.|++|+.+++++++||+-..=+ ++. .+.+++++.+.|
T Consensus 310 ~~G~~~~~G~~pvN~~GG~l~g~p~gatG~~~~~e~~~qlrG~ag~-----rQv--------------~~a~~~l~~~~G 370 (386)
T PRK08313 310 EAGETAIGGRLPVNPSGGVLSSNPIGASGMIRFAEAALQVMGKAGE-----HQV--------------DGARKALGHAYG 370 (386)
T ss_pred HCCCcCCCCCccccCCCcccccCCCcHHHHHHHHHHHHHhcccccC-----CcC--------------CCccEEEEeccC
Confidence 134544333333 9999999999999999999864211 011 124678888886
Q ss_pred -cCCceeEEEEee
Q psy5222 403 -FSGINSSIILCK 414 (415)
Q Consensus 403 -~gG~~~~~vl~~ 414 (415)
.+...+.+||++
T Consensus 371 g~~~~~~~~v~~~ 383 (386)
T PRK08313 371 GGSQFFSMWVVGS 383 (386)
T ss_pred CcceEEEEEEEec
Confidence 444555555553
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.3e-22 Score=190.40 Aligned_cols=277 Identities=14% Similarity=0.105 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|||+++++ +| ++++++... ......++..+|
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~d--ID----~iv~~~~~~-----------------------------~~~~~~la~~lG 72 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMAD--VD----GLFTASPDD-----------------------------ALWGLSVAEYLG 72 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEecCCC-----------------------------CCcHHHHHHHcC
Confidence 4589999999999999999988 87 677764210 011235888899
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEe-ecCCCCCH---------------------HHHHHH------
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLII-SAMTDLSP---------------------MEIQAF------ 207 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvg-g~e~~~~~---------------------~~~~~~------ 207 (415)
+++ |...+..+|+|+..+|..|+++|++|.+|+|||+ |.+..... ..+..+
T Consensus 73 l~~~~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym 152 (384)
T PRK06158 73 IRPRFVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHM 152 (384)
T ss_pred CCCeeeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHH
Confidence 976 7788899999999999999999999999999985 55522100 000000
Q ss_pred HHcc-------cccC---CCCCCCCCC----------------cccCCCCCCCCccccceEEEEEeCChhhHHhcCCeeE
Q psy5222 208 HAIG-------AMGG---KNFYNFPKK----------------TCRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYL 261 (415)
Q Consensus 208 ~~~~-------~ls~---~~~~~~~~~----------------~~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~i~ 261 (415)
.+.| .++. .+...+|.. -+.|+.. .+...++||++++||.+++.|++.+.++
T Consensus 153 ~~yG~t~e~~a~vav~~~~~a~~NP~A~~~~~~t~e~vl~s~~ia~Pl~~-~d~~~~~DGAaAvVL~s~e~A~~l~~~~- 230 (384)
T PRK06158 153 HQYGTTREQLAEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLSV-RDCCLVTDGAGAVVMVRADRARDLPRPP- 230 (384)
T ss_pred HHHCcCHHHHHHHHHHHHHHHhcCchhhhCCCCCHHHHhcCCccCCCCch-hhcCCccCCeEEEEEecHHHHhhcCCCc-
Confidence 0000 0000 000011211 1223332 4667899999999999999999877663
Q ss_pred EEEEeEEeccCCCCC---CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHH-HhcCC------
Q psy5222 262 ARLLGGVINLHATAS---PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEV-YKNHF------ 331 (415)
Q Consensus 262 a~i~g~~~~~~~~~~---~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~-~~~~~------ 331 (415)
++|.|++..++.... ..........+++++|++||++++|||++|+|++++. .|...++.+ |..++
T Consensus 231 v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~----~~l~~~E~lG~~~~Ge~~~~~ 306 (384)
T PRK06158 231 VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTI----NTILFLEDLGFCAKGEGGAFV 306 (384)
T ss_pred EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchH----HHHHHHHHcCCCCCCcHHHHH
Confidence 778888877664433 1223455678999999999999999999999999884 344444433 21111
Q ss_pred --------Cceeeeeccc--ccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEecc
Q psy5222 332 --------SKLLLNSTKS--LTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSF 401 (415)
Q Consensus 332 --------~~~~v~~~k~--~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~ 401 (415)
-++|++..-+ ..||+ |++|+.+++++++||+...- -++. .+.+++++++.
T Consensus 307 ~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~ag-----~rQv--------------~~a~~gl~~~~ 366 (384)
T PRK06158 307 EGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEAG-----ERQV--------------AGAEVALAHGN 366 (384)
T ss_pred HCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCCC-----CCcC--------------CCCCEEEEECC
Confidence 1244443333 35999 99999999999999986421 1111 12467888887
Q ss_pred C-cCCceeEEEEee
Q psy5222 402 G-FSGINSSIILCK 414 (415)
Q Consensus 402 g-~gG~~~~~vl~~ 414 (415)
| ++..+..+|+++
T Consensus 367 Gg~~~~~~~~vl~~ 380 (384)
T PRK06158 367 GGVLSSQATAILGT 380 (384)
T ss_pred CCcccceEEEEEec
Confidence 6 555566667764
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-22 Score=194.73 Aligned_cols=275 Identities=13% Similarity=0.113 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCC
Q psy5222 78 IQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNI 157 (415)
Q Consensus 78 ~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 157 (415)
..|+.+++++||+++|+++++ +| .+++|....... ...++..++...|+
T Consensus 30 ~eL~~~a~~~al~~agl~~~~--ID----~vi~G~~~~~~~-------------------------~~~~ar~~a~~aGl 78 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPEL--IE----QLVFGQVVQMPE-------------------------APNIAREIVLGTGM 78 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHH--CC----EEEEeccCCCCC-------------------------ccHHHHHHHHHCCC
Confidence 588999999999999999988 87 678874321000 01345568889999
Q ss_pred C--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHH-H--------------HH-------H----
Q psy5222 158 R--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQ-A--------------FH-------A---- 209 (415)
Q Consensus 158 ~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~-~--------------~~-------~---- 209 (415)
. -|.++|+.+|+||+.|+..|+++|++|++|++||+|+|++....... . +. .
T Consensus 79 ~~~~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (428)
T PRK08963 79 NVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLR 158 (428)
T ss_pred CCCCcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchh
Confidence 6 49999999999999999999999999999999999999654322100 0 00 0
Q ss_pred --c---ccccCC---CCC------------------------------CC----------------CCC-------cccC
Q psy5222 210 --I---GAMGGK---NFY------------------------------NF----------------PKK-------TCRP 228 (415)
Q Consensus 210 --~---~~ls~~---~~~------------------------------~~----------------~~~-------~~~p 228 (415)
. ..+... ..+ .. |.. ..|+
T Consensus 159 ~~~~~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~~~~~D~~~r~ 238 (428)
T PRK08963 159 DLLPVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIRG 238 (428)
T ss_pred hccccCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCceeeCCCCCCCC
Confidence 0 000000 000 00 211 1111
Q ss_pred -------------CC------CCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHH
Q psy5222 229 -------------FD------KLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMN 289 (415)
Q Consensus 229 -------------fd------~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~ 289 (415)
|+ ...+...++|||+++||++++.|++.+.++.++|.+++....... .. .......+++
T Consensus 239 ~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~-~~-~~~~~~~a~~ 316 (428)
T PRK08963 239 DSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVW-QD-MLLGPAYATP 316 (428)
T ss_pred CCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCch-hh-hhhHHHHHHH
Confidence 11 112334469999999999999999999999999999887642110 00 1234568999
Q ss_pred HHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHH-----Hhc-----------CCCceeeeecccccchhHhhHHHH
Q psy5222 290 SVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEV-----YKN-----------HFSKLLLNSTKSLTGHCLYSSGIV 353 (415)
Q Consensus 290 ~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~-----~~~-----------~~~~~~v~~~k~~~Gh~~~asg~~ 353 (415)
++|+++|++++|||++|+|+.++. .|...++.+ +.. +.+++++.+..-..|||.||+|+.
T Consensus 317 ~al~~AGl~~~DiD~~Ei~d~Fa~----~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG~~ 392 (428)
T PRK08963 317 LALERAGLTLADLTLIDMHEAFAA----QTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGAR 392 (428)
T ss_pred HHHHHcCCCHHHCCEEEEccccHH----HHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHH
Confidence 999999999999999999988873 334333332 111 111455555555569999999999
Q ss_pred HHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 354 EIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 354 ~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++.++.||+.. . .++.+++..+=||...++|||+.
T Consensus 393 ~~~e~~~qLrg~----------~----------------g~~gl~~~c~ggG~g~a~~ie~~ 428 (428)
T PRK08963 393 MITQTLHELRRR----------G----------------GGLGLTTACAAGGLGAAMVLEVE 428 (428)
T ss_pred HHHHHHHHHhhc----------C----------------CCEEEEEEccccChhhEEEEEeC
Confidence 999999999852 1 25788888999999999999863
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-21 Score=190.53 Aligned_cols=288 Identities=12% Similarity=0.095 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHH----
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMS---- 152 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia---- 152 (415)
...|+.+++++||+|+|+++++.-+| ++++|...+... .. ...++..++
T Consensus 48 ~~eL~~~a~~~al~~agl~~~d~~ID----~vi~G~~~~~~~---------------------~~--~~~~a~~~~~~~g 100 (438)
T PTZ00455 48 LEELLATAIQGTLENTGLDGKAALVD----KVVVGNFLGELF---------------------SS--QGHLGPAAVGSLG 100 (438)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcC----EEEEEecccccc---------------------cc--ccchHHHHHHhcc
Confidence 36899999999999999976540023 567773311000 00 001122333
Q ss_pred ---HHhCCCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHH-H-----------H-----------H
Q psy5222 153 ---EIFNIRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPM-E-----------I-----------Q 205 (415)
Q Consensus 153 ---~~lgl~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~-~-----------~-----------~ 205 (415)
..+|+.. |.++|+.+|+||+.||..|+++|++|.+|+|||+|+|.+.... . + .
T Consensus 101 l~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (438)
T PTZ00455 101 QSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDFTFP 180 (438)
T ss_pred CcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCcchH
Confidence 4556655 9999999999999999999999999999999999999643311 0 0 0
Q ss_pred H-HHH-cccccCCCCC-----------------CCCCCcc--cCCC------------------------CCCCCccccc
Q psy5222 206 A-FHA-IGAMGGKNFY-----------------NFPKKTC--RPFD------------------------KLAEGFIYGQ 240 (415)
Q Consensus 206 ~-~~~-~~~ls~~~~~-----------------~~~~~~~--~pfd------------------------~~~~G~~~ge 240 (415)
. |.. +..+...... .+|.... +|.. +..+...++|
T Consensus 181 ~~~a~~~~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~~sD 260 (438)
T PTZ00455 181 CLFAKRMKYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQVSD 260 (438)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCCccc
Confidence 0 100 0011101000 1121110 0110 1234445799
Q ss_pred eEEEEEeCChhhHHhcCCee----EEEEEeEEeccCCCCC-C-C-CCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCC
Q psy5222 241 ASAALLIEGNKNIKILNKSY----LARLLGGVINLHATAS-P-E-PNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSP 313 (415)
Q Consensus 241 Ga~alvL~~~~~A~~~g~~i----~a~i~g~~~~~~~~~~-~-~-~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~ 313 (415)
||+++||.+++.|++.+.++ .++|++++...+.... . . ........+++++|++||++++|||++|+|++++.
T Consensus 261 GAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~~AGl~~~DiD~~Ei~daFa~ 340 (438)
T PTZ00455 261 GGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTSRAAAQKALSMAGVKPSDLQVAEVHDCFTI 340 (438)
T ss_pred cceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccccccchHHHHHHHHHHHHcCCCHHHCcEeeecccChH
Confidence 99999999999999988776 6999999987653221 1 1 11122378999999999999999999999988874
Q ss_pred CCCHHHHHHHHHH-HhcCC----------------CceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCC
Q psy5222 314 LGDKIEISAIKEV-YKNHF----------------SKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP 376 (415)
Q Consensus 314 ~~d~~E~~al~~~-~~~~~----------------~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~ 376 (415)
.|...++.+ |..++ .++++.+.--.+|||.||+|+.+++.+++||+..--. .+.
T Consensus 341 ----~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLrg~ag~-----~Qv 411 (438)
T PTZ00455 341 ----AELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMKGQCGE-----YQM 411 (438)
T ss_pred ----HHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHhhcccc-----CCC
Confidence 344444433 22211 2455565656679999999999999999999853110 011
Q ss_pred CCCCCCcccCcccccC-CCEEEEeccC-cCCceeEEEEee
Q psy5222 377 IDNQANFSGKKSISIN-INNVMSNSFG-FSGINSSIILCK 414 (415)
Q Consensus 377 ~~~~~~~v~~~~~~~~-~~~~~v~s~g-~gG~~~~~vl~~ 414 (415)
.+ .++++..+.| ++..+...||+.
T Consensus 412 --------------~~~~~~gl~~~~Gg~~~~~~~~vl~~ 437 (438)
T PTZ00455 412 --------------KNIPALGATLNMGGDDKTAVSTVLQN 437 (438)
T ss_pred --------------CCcccEEEEeccCCCcceEEEEEEec
Confidence 11 3677788776 777777777753
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.8e-22 Score=189.71 Aligned_cols=274 Identities=13% Similarity=0.085 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..+.+++++++|+++++ +| -|++|........ ..+++.+++..-|
T Consensus 29 ~~~L~~~~~~~~l~r~~i~~~~--id----~vi~G~~~~~g~~------------------------g~n~aR~~al~ag 78 (417)
T PRK06025 29 PQHLAATVLKALAERNGLNTAD--VD----DIIWSTSSQRGKQ------------------------GGDLGRMAALDAG 78 (417)
T ss_pred HHHHHHHHHHHHHHhcCCCHHH--CC----EEEEEcCCCcCcc------------------------cCcHHHHHHHhCC
Confidence 3467888999999999999988 77 4777733110000 0145667777777
Q ss_pred C--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHH-Hcc-----------cccC---CCCC
Q psy5222 157 I--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFH-AIG-----------AMGG---KNFY 219 (415)
Q Consensus 157 l--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~-~~~-----------~ls~---~~~~ 219 (415)
+ +-|.+||+..|+||++||.+|++.|++|++|++|+||+|++...+.+.... ..+ .+.. ...+
T Consensus 79 lp~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~M 158 (417)
T PRK06025 79 YDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQ 158 (417)
T ss_pred CCCCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCH
Confidence 7 459999999999999999999999999999999999999766443211000 000 0000 0000
Q ss_pred ---------------------------------------------C--------CCCCccc-------------CCCC--
Q psy5222 220 ---------------------------------------------N--------FPKKTCR-------------PFDK-- 231 (415)
Q Consensus 220 ---------------------------------------------~--------~~~~~~~-------------pfd~-- 231 (415)
. +.++..| .|+.
T Consensus 159 g~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~ 238 (417)
T PRK06025 159 GVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIA 238 (417)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHcCCCCCccccc
Confidence 0 0111222 2431
Q ss_pred ----CCCCc-------------------------cccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHH
Q psy5222 232 ----LAEGF-------------------------IYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLN 282 (415)
Q Consensus 232 ----~~~G~-------------------------~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~ 282 (415)
..+|. .++|||+++||++++.|+++|.+++++|.|++...+.... ...
T Consensus 239 ~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~---~~~ 315 (417)
T PRK06025 239 DYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTL---MLN 315 (417)
T ss_pred cccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchh---hcc
Confidence 01343 3589999999999999999999999999999987654221 123
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHh
Q psy5222 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQM 362 (415)
Q Consensus 283 ~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l 362 (415)
+...+++++|+++|++++|||++++|..... ...+..+.++-...++++.+.+..+||+.|++|+..++.++.+|
T Consensus 316 ~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~-----~~l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL 390 (417)
T PRK06025 316 APVPAAKKVLAKAGLTKDDIDLWEINEAFAV-----VAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDEL 390 (417)
T ss_pred cHHHHHHHHHHHcCCCHHHCcEEEEchHHHH-----HHHHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHHHHHH
Confidence 4468999999999999999999999944431 12222333443334788899999999999999999999999999
Q ss_pred hcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 363 RKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 363 ~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+++ . .++.++.-.+.||...++|||+
T Consensus 391 ~~~----------g----------------~~~Gl~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 391 ERR----------G----------------LKRGLVTMCAAGGMAPAIIIER 416 (417)
T ss_pred HHh----------C----------------CCeEEEEEEeeccceeEEEEEe
Confidence 752 0 2456777788899999999986
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-21 Score=188.70 Aligned_cols=274 Identities=13% Similarity=0.088 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+++++||+|+|+++++ +| ++++|......... ..++.......|
T Consensus 26 ~~~L~~~a~~~al~dagl~~~~--ID----~vv~g~~~~~~~~~------------------------~~~~~~~~l~~g 75 (382)
T PRK07801 26 PADLGAHVLKGLVDRTGIDPAA--VD----DVIFGCVDTIGPQA------------------------GNIARTSWLAAG 75 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--cC----EEEEEeeccCCccc------------------------ccHHHHHHHHcC
Confidence 3578999999999999999998 88 67777321000000 011222222344
Q ss_pred C--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCC-HH--H--HH---H----------H-HHcccccC
Q psy5222 157 I--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLS-PM--E--IQ---A----------F-HAIGAMGG 215 (415)
Q Consensus 157 l--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~-~~--~--~~---~----------~-~~~~~ls~ 215 (415)
+ ..|.++++.+|+|++.||..|+++|++|++|+|||+|+|.+.. +. . .. . + ...+....
T Consensus 76 l~~~~p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 155 (382)
T PRK07801 76 LPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEV 155 (382)
T ss_pred CCCCCceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCC
Confidence 4 4688999999999999999999999999999999999995422 10 0 00 0 0 00010000
Q ss_pred -----------CCCC-----------------CCCC----------------------------CcccCCC-----CCCC
Q psy5222 216 -----------KNFY-----------------NFPK----------------------------KTCRPFD-----KLAE 234 (415)
Q Consensus 216 -----------~~~~-----------------~~~~----------------------------~~~~pfd-----~~~~ 234 (415)
+.+. ..|. ...+|.- ...+
T Consensus 156 ~~~~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d 235 (382)
T PRK07801 156 SQFRGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAV 235 (382)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCccccc
Confidence 0000 0000 0011111 1234
Q ss_pred CccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCC
Q psy5222 235 GFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPL 314 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~ 314 (415)
...++|||+++||++++.|++.+.+++++|.+++...+.... ...+...+++++|++||++++|||++|+|++++.
T Consensus 236 ~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~a~~~a~~~agi~~~did~~e~~d~Fa~- 311 (382)
T PRK07801 236 ASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVF---MLTAPIPATRYALEKTGLSIDDIDVVEINEAFAP- 311 (382)
T ss_pred CCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHh---hccChHHHHHHHHHHcCCCHHHcCEeeecccchH-
Confidence 455789999999999999999998888999998765542110 1122357899999999999999999999988773
Q ss_pred CCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCC
Q psy5222 315 GDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININ 394 (415)
Q Consensus 315 ~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~ 394 (415)
.|...++.+ +-..++++..+....+||+.||+|+.+++.++.+|+.. ..+
T Consensus 312 ---~~~~~~e~l-G~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~--------------------------~~~ 361 (382)
T PRK07801 312 ---VVLAWLKET-GADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERT--------------------------GGR 361 (382)
T ss_pred ---HHHHHHHHh-CCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhc--------------------------CCC
Confidence 355555443 32223788888888899999999999999999999861 135
Q ss_pred EEEEeccCcCCceeEEEEee
Q psy5222 395 NVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 395 ~~~v~s~g~gG~~~~~vl~~ 414 (415)
+.+.++.|-||+..++||++
T Consensus 362 ~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 362 YGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred EEEEEEcccccceeEEEEEe
Confidence 67888888889999999985
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.2e-22 Score=193.89 Aligned_cols=274 Identities=12% Similarity=0.099 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|+|+++++ || ++++|+...... ...++..++..+|
T Consensus 27 ~~~L~~~A~~~Al~dAgl~~~d--ID----~vi~g~~~~~~~-------------------------~~~~a~~v~~~lG 75 (426)
T PRK08170 27 ASDLAVAAGRALLNRQPFAPDD--LD----EVILGCAMPSPD-------------------------EANIARVVALRLG 75 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeccCCCC-------------------------cChHHHHHHHHhC
Confidence 3689999999999999999998 88 688874321000 0134567889999
Q ss_pred CC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH--------H-H-------------------H
Q psy5222 157 IR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME--------I-Q-------------------A 206 (415)
Q Consensus 157 l~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~--------~-~-------------------~ 206 (415)
+. .|.++++.+|+|++.+|..|+++|++|.+|++||+|+|.+..... . . .
T Consensus 76 l~~~~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (426)
T PRK08170 76 CGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRP 155 (426)
T ss_pred cCCCceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccc
Confidence 94 399999999999999999999999999999999999995432110 0 0 0
Q ss_pred -HHH------cccccCC--CCC------------------------------C------------------CCCCc---c
Q psy5222 207 -FHA------IGAMGGK--NFY------------------------------N------------------FPKKT---C 226 (415)
Q Consensus 207 -~~~------~~~ls~~--~~~------------------------------~------------------~~~~~---~ 226 (415)
+.. .+..... ..+ . +|... .
T Consensus 156 ~~~~~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~~np~a~de~~ 235 (426)
T PRK08170 156 SYLAPVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDGV 235 (426)
T ss_pred cccccccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCCCCeeccCCCC
Confidence 000 0000000 000 0 01000 1
Q ss_pred cC-------------CCC---C---CCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHH
Q psy5222 227 RP-------------FDK---L---AEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISV 287 (415)
Q Consensus 227 ~p-------------fd~---~---~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~ 287 (415)
|| |+. . .+...++|||+++||++++.|++.+.++.++|.+++....... ....+...+
T Consensus 236 r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~---~~~~~~~~a 312 (426)
T PRK08170 236 RPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPS---QMGLGPVHA 312 (426)
T ss_pred CCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCch---hhcccHHHH
Confidence 11 210 0 3445579999999999999999999888889999877543221 122346789
Q ss_pred HHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHH----Hhc------------CCCceeeeecccccchhHhhHH
Q psy5222 288 MNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEV----YKN------------HFSKLLLNSTKSLTGHCLYSSG 351 (415)
Q Consensus 288 ~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~----~~~------------~~~~~~v~~~k~~~Gh~~~asg 351 (415)
++++|++||++++|||++|+|+.++. .|...+..+ |.. +..++++.+..-..|||.||+|
T Consensus 313 ~~~al~~aGl~~~did~~ei~daFa~----~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG 388 (426)
T PRK08170 313 ATPLLQRHGLTLEDLDLWEINEAFAA----QVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASG 388 (426)
T ss_pred HHHHHHHcCCCHHHcCEEEecchhHH----HHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCcc
Confidence 99999999999999999999977763 233222211 110 1123444444444699999999
Q ss_pred HHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 352 IVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 352 ~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+.++..++.+|++. ..++.+++...-||.-.++|||+
T Consensus 389 ~~~~~~l~~~l~~~--------------------------~~~~g~~~~c~~gg~g~a~~~e~ 425 (426)
T PRK08170 389 ARIVLHLLHALKRR--------------------------GTKRGIAAICIGGGQGGAMLLER 425 (426)
T ss_pred HHHHHHHHHHHHhh--------------------------CCCeEEEEEecCCChhheEEEEe
Confidence 99999999999851 13678888888899999999986
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=9e-22 Score=191.89 Aligned_cols=284 Identities=14% Similarity=0.112 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|+|+++++ +| .++++...... ......+..++..+|
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~d--Id----~vi~~~~~~~~------------------------~~~~~~a~~va~~lG 72 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRD--VQ----LVVGADTIRNG------------------------YPGFVAGATFAQALG 72 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeccCCc------------------------cCCccHHHHHHHHhC
Confidence 4789999999999999998888 76 45555321100 000123567899999
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHH--H-HH------HHHH---ccc-----------
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPM--E-IQ------AFHA---IGA----------- 212 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~--~-~~------~~~~---~~~----------- 212 (415)
+++ |.++++.+|+|++.+|..|+++|++|++|.|||+|+|.+.... . .. .+.. .+.
T Consensus 73 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~ 152 (399)
T PRK06059 73 WNGAPVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLAR 152 (399)
T ss_pred CCCCceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHH
Confidence 987 8999999999999999999999999999999999999543210 0 00 0000 000
Q ss_pred ---------------ccCC---CCCCCCCCccc----------------CCCCCCCCccccceEEEEEeCChhhHHhc--
Q psy5222 213 ---------------MGGK---NFYNFPKKTCR----------------PFDKLAEGFIYGQASAALLIEGNKNIKIL-- 256 (415)
Q Consensus 213 ---------------ls~~---~~~~~~~~~~~----------------pfd~~~~G~~~geGa~alvL~~~~~A~~~-- 256 (415)
++.. +...+|+...| |+. .-+...++|||+++||.+++.|++.
T Consensus 153 ~~~~~yg~s~e~~a~v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~-~~d~~~~~DGAaA~vl~s~~~A~~l~~ 231 (399)
T PRK06059 153 RRMDLYGATVEDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLR-LLDICATSDGAAALIVASKSFARRHLG 231 (399)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCc-hhhcCCCCCceEEEEEecHHHHHhhcc
Confidence 0000 00011211111 111 1245567999999999999999887
Q ss_pred CCeeEEEEEeEEeccCCCC--C-CC-----------C--CHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHH
Q psy5222 257 NKSYLARLLGGVINLHATA--S-PE-----------P--NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEI 320 (415)
Q Consensus 257 g~~i~a~i~g~~~~~~~~~--~-~~-----------~--~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~ 320 (415)
+.+..++|++++...+... . .. + .....+.+++++|++||++++|||++|+|++.+. .|.
T Consensus 232 ~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~----~~l 307 (399)
T PRK06059 232 SVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTA----LEL 307 (399)
T ss_pred ccCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeecccChH----HHH
Confidence 6667789999987643221 0 00 0 1112357899999999999999999999998774 344
Q ss_pred HHHHHH-HhcC---------------C-CceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCc
Q psy5222 321 SAIKEV-YKNH---------------F-SKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANF 383 (415)
Q Consensus 321 ~al~~~-~~~~---------------~-~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~ 383 (415)
..++.+ |..+ + .++++++.--..|||.|++|+.+++++++||+...- -++.
T Consensus 308 ~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLrg~ag-----~~Qv------- 375 (399)
T PRK06059 308 DWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQAG-----GRQV------- 375 (399)
T ss_pred HHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHHHHHHhccCcC-----CccC-------
Confidence 444332 1111 0 134444444456999999999999999999986421 1111
Q ss_pred ccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 384 SGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 384 v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
...+++++.+.|.+|..+++||++
T Consensus 376 -------~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 376 -------EGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred -------CCccEEEEeccCCcccceEEEecC
Confidence 124678888888889999999885
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-21 Score=186.92 Aligned_cols=273 Identities=12% Similarity=0.081 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHH--HHHHh
Q psy5222 78 IQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGI--MSEIF 155 (415)
Q Consensus 78 ~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--ia~~l 155 (415)
..|+.+++++||+++|+++++ +| .+++|......... ..++.. +...|
T Consensus 27 ~~L~~~a~~~al~~a~l~~~~--Id----~vi~G~~~~~~~~~------------------------~~~ar~~~l~~gl 76 (390)
T PRK06504 27 ADLAAQVLDALVDRSGADPAL--IE----DVIMGCVSQVGEQA------------------------TNVARNAVLASKL 76 (390)
T ss_pred HHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecccccccc------------------------ccHHHHHHHHcCC
Confidence 688999999999999999998 88 57777322100000 012222 22333
Q ss_pred CCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHH--------HHHcc--cccCC-C--C-C--
Q psy5222 156 NIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQA--------FHAIG--AMGGK-N--F-Y-- 219 (415)
Q Consensus 156 gl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~--------~~~~~--~ls~~-~--~-~-- 219 (415)
+..-|.++|+.+|+||+.|+..|++.|++|++|++||+|+|++........ +.... .+... . . .
T Consensus 77 ~~~vP~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (390)
T PRK06504 77 PESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQF 156 (390)
T ss_pred CCCCceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHH
Confidence 334599999999999999999999999999999999999996543211000 00000 00000 0 0 0
Q ss_pred -----------------------------C-----------------CCCC---------------------cccCCCC-
Q psy5222 220 -----------------------------N-----------------FPKK---------------------TCRPFDK- 231 (415)
Q Consensus 220 -----------------------------~-----------------~~~~---------------------~~~pfd~- 231 (415)
. ++++ ..+|...
T Consensus 157 ~aae~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~~~ 236 (390)
T PRK06504 157 TGAEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIAEG 236 (390)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCCCC
Confidence 0 0000 1122211
Q ss_pred ----CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEe
Q psy5222 232 ----LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNT 307 (415)
Q Consensus 232 ----~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~ 307 (415)
..+...++|||+++||.+++.|++.+.++.++|.+++....... ....+...+++++|+++|++++|||++|+
T Consensus 237 g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~---~~~~~~~~a~~~a~~~agl~~~Did~~Ei 313 (390)
T PRK06504 237 GRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPV---IMLEAPLPATERALKKAGMKIDDIDLYEV 313 (390)
T ss_pred CCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCch---hhhccHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 12444578999999999999999988888878888776543211 12345567999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCc
Q psy5222 308 HGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKK 387 (415)
Q Consensus 308 h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~ 387 (415)
|+.++. .|...++. ++-..+++++.+..-.+|||.||+|+.++..++.+|++.
T Consensus 314 ~d~Fa~----~~l~~~e~-lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~---------------------- 366 (390)
T PRK06504 314 NEAFAS----VPLAWLKA-TGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQR---------------------- 366 (390)
T ss_pred cccchH----HHHHHHHH-hCCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhh----------------------
Confidence 988774 34444433 333333677888888889999999999999999999851
Q ss_pred ccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 388 SISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 388 ~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+.++.+.+..|-||...++||++
T Consensus 367 ----~~~~gl~~~~~ggg~g~a~ile~ 389 (390)
T PRK06504 367 ----GKRYGLQTMCEGGGMANVTIVER 389 (390)
T ss_pred ----CCCeEEEEEeecccceeEEEEEe
Confidence 13567777777788999999886
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-21 Score=185.03 Aligned_cols=282 Identities=13% Similarity=0.062 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|+|+++++ +| ++++++..... .. ....+..++..+|
T Consensus 29 ~~~L~~~A~~~Al~dagl~~~d--ID----~~i~~~~~~~~----------------------~~--~~~~a~~l~~~lG 78 (392)
T PRK06065 29 PQELAWEAASKALDEAGLELKD--ID----CVVIGSAPDAF----------------------DG--VHMKGEYLSHGSG 78 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEeccCCcc----------------------cc--cccHHHHHHHHcC
Confidence 4689999999999999999998 87 67776321100 00 0134557888999
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCH----HHHH-H-----HH-Hcc-------------
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSP----MEIQ-A-----FH-AIG------------- 211 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~----~~~~-~-----~~-~~~------------- 211 (415)
+.+ |.+.|+++|+|+..+|..|+++|++|.+|+|||+|+|.+... .... . +. ..+
T Consensus 79 ~~~~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~r 158 (392)
T PRK06065 79 GIRKPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHR 158 (392)
T ss_pred CCCCCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHH
Confidence 874 889999999999999999999999999999999998853111 0000 0 00 000
Q ss_pred cccC-------------CC---CCCCCCCcc----------------cCCCCCCCCccccceEEEEEeCChhhHHhcCCe
Q psy5222 212 AMGG-------------KN---FYNFPKKTC----------------RPFDKLAEGFIYGQASAALLIEGNKNIKILNKS 259 (415)
Q Consensus 212 ~ls~-------------~~---~~~~~~~~~----------------~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~ 259 (415)
.+.. ++ ...+|.... -|+. .-+...++|||+++||.+++.|++.+.+
T Consensus 159 ym~~yG~~~e~lA~vav~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~-l~d~~~~~DGAaA~vl~s~e~A~~l~~~ 237 (392)
T PRK06065 159 YMATYGIKKEEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQ-LLDVSPVSDGAAAIVLASEDLARRYTDT 237 (392)
T ss_pred HHHHHCcCHHHHHHHHHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCc-hhhcCCCCCceEEEEEeCHHHHHhcCCC
Confidence 0000 00 001121111 1221 1345568999999999999999988766
Q ss_pred eEEEEEeEEeccCCCCC---CCCCHHHHHHHHHHHHHHcCCCC--CcccEEEecCCCCCCCCHHHHHHHHHH--------
Q psy5222 260 YLARLLGGVINLHATAS---PEPNLNNEISVMNSVLKQSGLKK--NMIDYLNTHGSSSPLGDKIEISAIKEV-------- 326 (415)
Q Consensus 260 i~a~i~g~~~~~~~~~~---~~~~~~~~~~~~~~aL~~Agl~~--~dId~v~~h~~gt~~~d~~E~~al~~~-------- 326 (415)
+ ..|.|++...+.... ..........+.+++|++||+++ +|||++|+|++++. .|...++.+
T Consensus 238 ~-v~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~----~~l~~~E~lG~~~~G~~ 312 (392)
T PRK06065 238 P-VWVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDY----KELHHLEGLQLAKRGEA 312 (392)
T ss_pred C-EEEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChH----HHHHHHHHcCCCCCCcH
Confidence 5 569999886654332 11234445689999999999985 99999999999884 344444322
Q ss_pred ---Hhc-----CCC-ceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCC-CEE
Q psy5222 327 ---YKN-----HFS-KLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISINI-NNV 396 (415)
Q Consensus 327 ---~~~-----~~~-~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~-~~~ 396 (415)
+.+ .++ +++.++.--..||+.+|+|+.++++++.||+...-+ ++. .+. +++
T Consensus 313 ~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ag~-----rQv--------------~~a~~~~ 373 (392)
T PRK06065 313 PKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGTAGK-----MQV--------------KKPVHTG 373 (392)
T ss_pred HHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhccccC-----CcC--------------CCcccee
Confidence 111 111 333344444459999999999999999999864211 111 123 678
Q ss_pred EEeccC-cCCceeEEEEe
Q psy5222 397 MSNSFG-FSGINSSIILC 413 (415)
Q Consensus 397 ~v~s~g-~gG~~~~~vl~ 413 (415)
++.+.| .+..++.+||+
T Consensus 374 l~~~~Gg~~~~~~~~il~ 391 (392)
T PRK06065 374 VAQAWGDLMQAGTVIVLR 391 (392)
T ss_pred EEeccccccceeEEEEec
Confidence 888876 55566666664
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.2e-21 Score=187.72 Aligned_cols=289 Identities=12% Similarity=0.063 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|+|+++++ +| +++++....... . .+.....++..+|
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~d--ID----~vv~~~~~~~~~----------------------g--~~~~~~~~~~~lG 86 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLAD--ID----GSVASYFSDHFQ----------------------R--QLLAGIMVQDYLG 86 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--cC----EEEEeccccccc----------------------c--cchhhHHHHHhcC
Confidence 3689999999999999999988 87 566553211000 0 0112234678999
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHH--HHHHcc---cccCC-CC-----C-----
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQ--AFHAIG---AMGGK-NF-----Y----- 219 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~--~~~~~~---~ls~~-~~-----~----- 219 (415)
+.. |+++++.+|+|+..||..|++.|++|.+|+|||+|+|.+.+..... .+.... .+... .. .
T Consensus 87 l~~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ 166 (430)
T PRK06365 87 LVPKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAV 166 (430)
T ss_pred CCCCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHH
Confidence 976 8899999999999999999999999999999999999543321100 000000 00000 00 0
Q ss_pred -------------------------CCCCCcc-cCCC--------------CCCCCccccceEEEEEeCChhhHHhcCCe
Q psy5222 220 -------------------------NFPKKTC-RPFD--------------KLAEGFIYGQASAALLIEGNKNIKILNKS 259 (415)
Q Consensus 220 -------------------------~~~~~~~-~pfd--------------~~~~G~~~geGa~alvL~~~~~A~~~g~~ 259 (415)
..|.... .|.+ ...+...++|||+++||.+++.|++.+.+
T Consensus 167 ry~~~yG~t~e~la~vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~ 246 (430)
T PRK06365 167 RHMYEFGTTVEQLAKVSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDK 246 (430)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCC
Confidence 1111111 0111 11234457999999999999999987766
Q ss_pred eEEEEEeEEeccCCCCC-C------------------------CCCHHHHHHHHHHHHHHcCCC--CCcccEEEecCCCC
Q psy5222 260 YLARLLGGVINLHATAS-P------------------------EPNLNNEISVMNSVLKQSGLK--KNMIDYLNTHGSSS 312 (415)
Q Consensus 260 i~a~i~g~~~~~~~~~~-~------------------------~~~~~~~~~~~~~aL~~Agl~--~~dId~v~~h~~gt 312 (415)
+ ..|++++..+++... . .........+++++|++||++ ++|||++|+|++.+
T Consensus 247 p-v~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa 325 (430)
T PRK06365 247 P-VLIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYT 325 (430)
T ss_pred C-eEEEEEEEeccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCc
Confidence 5 456676665443221 0 012334568999999999998 79999999999887
Q ss_pred CCCCHHHHHHHHHH-HhcCC----------------CceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCC-C
Q psy5222 313 PLGDKIEISAIKEV-YKNHF----------------SKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNL-E 374 (415)
Q Consensus 313 ~~~d~~E~~al~~~-~~~~~----------------~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~-~ 374 (415)
. .|...++.+ |..+. .+++..+.--..||+.||+|+.+++.+++||+...-+-.-.- +
T Consensus 326 ~----~~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~QLrG~a~~~~~~~~r 401 (430)
T PRK06365 326 S----SEIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQLQGRIKKHFHDDYL 401 (430)
T ss_pred H----HHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCcccHHHHHHHHHHHHHHhcccCCCCCcccc
Confidence 4 344444433 12111 134444444445999999999999999999997532100000 0
Q ss_pred CCCCCCCCcccCcccccCCCEEEEeccC-cCCceeEEEEee
Q psy5222 375 SPIDNQANFSGKKSISININNVMSNSFG-FSGINSSIILCK 414 (415)
Q Consensus 375 ~~~~~~~~~v~~~~~~~~~~~~~v~s~g-~gG~~~~~vl~~ 414 (415)
+. .+.+++++++.| .|..+.++||++
T Consensus 402 Qv--------------~~a~~~l~~~~gg~~~~~~~~vl~~ 428 (430)
T PRK06365 402 QV--------------KNAKRGLIHSHAGTGTYVTVTILEA 428 (430)
T ss_pred cC--------------CCccEEEEecCCcccceEEEEEEec
Confidence 11 124678888886 555677777764
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-21 Score=187.47 Aligned_cols=283 Identities=12% Similarity=0.077 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+++++||+|+|+++++ || ++++|+...... . ......++..+|
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~d--ID----~v~vg~~~~~~~-~------------------------~~~~~~~a~~lG 75 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKD--ID----AAWFGTHYDEIG-S------------------------GKSGTPLSRALR 75 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecccccc-c------------------------cchhHHHHHHcC
Confidence 4689999999999999999998 88 688774211000 0 001135777899
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH--HH------HHHH------------------
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME--IQ------AFHA------------------ 209 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~--~~------~~~~------------------ 209 (415)
+.+ |.++|+.+|+|++.+|..|++.|++|++|++||+|+|.+..... .. .+..
T Consensus 76 l~~~~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~ 155 (398)
T PRK06157 76 LPNIPVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAY 155 (398)
T ss_pred CCCCCEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHH
Confidence 976 88889999999999999999999999999999999996432100 00 0000
Q ss_pred ---cccccCCCC--------------CCCCCCcc----------------cCCCCCCCCccccceEEEEEeCChhhHHhc
Q psy5222 210 ---IGAMGGKNF--------------YNFPKKTC----------------RPFDKLAEGFIYGQASAALLIEGNKNIKIL 256 (415)
Q Consensus 210 ---~~~ls~~~~--------------~~~~~~~~----------------~pfd~~~~G~~~geGa~alvL~~~~~A~~~ 256 (415)
.+.-.+..+ ..+|+... .|+ ..-+...++|||+++||.+++.|++.
T Consensus 156 ~~~yG~t~e~~~~~~a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl-~~~d~~~~~DGAaA~vl~s~~~A~~l 234 (398)
T PRK06157 156 AAKYGVSREDLKRAMAHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPL-GLFDCCGVSDGAAAAIVTTPEIARAL 234 (398)
T ss_pred HHHhCCCHHHHcccccHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCC-chhccCCCCCccEEEEEecHHHHHhh
Confidence 000000000 01121111 111 11255568999999999999999988
Q ss_pred CCeeEEEEEeEEeccCCCCC-----CCC-CHHHHHHHHHHHHHHcCCC--CCcccEEEecCCCCCCCCHHHHHHHHHH-H
Q psy5222 257 NKSYLARLLGGVINLHATAS-----PEP-NLNNEISVMNSVLKQSGLK--KNMIDYLNTHGSSSPLGDKIEISAIKEV-Y 327 (415)
Q Consensus 257 g~~i~a~i~g~~~~~~~~~~-----~~~-~~~~~~~~~~~aL~~Agl~--~~dId~v~~h~~gt~~~d~~E~~al~~~-~ 327 (415)
+.++.++|+|++...+.... ..+ .......+.+++|++||++ ++|||++|+|++++. .|...++.+ |
T Consensus 235 ~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~Fs~----~~l~~~e~lGl 310 (398)
T PRK06157 235 GKKDPVYVKALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHDCFSI----TELVTMEDLGL 310 (398)
T ss_pred CCCCCeEEEEEEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEecCChH----HHHHHHHHcCC
Confidence 76567899999876543211 122 1223567999999999998 799999999998884 344444433 2
Q ss_pred hcCC--------------Cceeee--ecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCccccc
Q psy5222 328 KNHF--------------SKLLLN--STKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISI 391 (415)
Q Consensus 328 ~~~~--------------~~~~v~--~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~ 391 (415)
..++ -++|++ +.--.+|||.||+|+.+++++++||+...= -++. .
T Consensus 311 ~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ag-----~rQv--------------~ 371 (398)
T PRK06157 311 SERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGRAG-----ERQL--------------K 371 (398)
T ss_pred CCCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhccccc-----CccC--------------C
Confidence 2211 123444 333446999999999999999999986421 1111 2
Q ss_pred CCCEEEEeccC-c--CCceeEEEEee
Q psy5222 392 NINNVMSNSFG-F--SGINSSIILCK 414 (415)
Q Consensus 392 ~~~~~~v~s~g-~--gG~~~~~vl~~ 414 (415)
+.+++++++.| + |..+...|+.+
T Consensus 372 ~a~~~l~~~~gg~~~~~~~~~~~~~~ 397 (398)
T PRK06157 372 NPRLALTHNLGGAPGQNVCSVSIVGR 397 (398)
T ss_pred CccEEEEeccCCcCCCCEEEEEEEec
Confidence 24788888877 3 34444455543
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.4e-21 Score=186.51 Aligned_cols=286 Identities=12% Similarity=0.075 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|||+++++ +| ++++++..+.. . . . ...+.... .....+
T Consensus 26 ~~eLa~eA~~~AL~dAgl~~~d--ID----~vi~g~~~~~~--~---~-----~---------~~~~~~~~---~~~~~~ 77 (403)
T PRK06289 26 FADLTREVVDGTLAAAGVDADD--IE----VVHVGNFFGEL--F---A-----G---------QGHLGAMP---ATVHPA 77 (403)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeccccc--c---c-----c---------ccccchHH---HHHhhc
Confidence 4689999999999999999999 88 68877432110 0 0 0 00000011 112234
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHH-----H----HHHHccccc--CCCC-C----
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEI-----Q----AFHAIGAMG--GKNF-Y---- 219 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~-----~----~~~~~~~ls--~~~~-~---- 219 (415)
+.| |+++++.+|+|++.||..|+.+|++|++|+|||+|+|.+...... . .+...+... .... .
T Consensus 78 ~~g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a 157 (403)
T PRK06289 78 LWGVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVA 157 (403)
T ss_pred CCCCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHH
Confidence 444 899999999999999999999999999999999999854322100 0 000000000 0000 0
Q ss_pred --------------------------CCCCCccc------CCC--------------CCCCCccccceEEEEEeCChhhH
Q psy5222 220 --------------------------NFPKKTCR------PFD--------------KLAEGFIYGQASAALLIEGNKNI 253 (415)
Q Consensus 220 --------------------------~~~~~~~~------pfd--------------~~~~G~~~geGa~alvL~~~~~A 253 (415)
.+|....+ |.. ...+...++|||+++||.+++.|
T Consensus 158 ~~y~~~yG~t~e~la~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a 237 (403)
T PRK06289 158 DEYDRRYGLDEEHLRAIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYL 237 (403)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHH
Confidence 12221111 100 01234457899999999999999
Q ss_pred HhcCC-eeEEEEEeEEeccCCCCC-C-------CC-CHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHH
Q psy5222 254 KILNK-SYLARLLGGVINLHATAS-P-------EP-NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAI 323 (415)
Q Consensus 254 ~~~g~-~i~a~i~g~~~~~~~~~~-~-------~~-~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al 323 (415)
++.+. ++.++|+|++..++.... . .+ .......+.+++|++||++++|||++|+|++++. .|...+
T Consensus 238 ~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~D~fa~----~~l~~l 313 (403)
T PRK06289 238 RDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTP----SEYLAI 313 (403)
T ss_pred HHhccCCCCEEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeeeccchH----HHHHHH
Confidence 88775 567999999987553322 1 11 2344567999999999999999999999999884 344444
Q ss_pred HHH-HhcC--------------CCceeeeecc--cccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccC
Q psy5222 324 KEV-YKNH--------------FSKLLLNSTK--SLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGK 386 (415)
Q Consensus 324 ~~~-~~~~--------------~~~~~v~~~k--~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~ 386 (415)
+.+ |..+ .-++|++..- -..|||.||+|+.++++++.||+... +-++.
T Consensus 314 e~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a-----g~~Qv---------- 378 (403)
T PRK06289 314 DHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGTA-----GDYQV---------- 378 (403)
T ss_pred HHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHhccc-----cCccC----------
Confidence 433 2221 1134444444 44599999999999999999999641 10111
Q ss_pred cccccCCCEEEEeccC-cCCceeEEEEe
Q psy5222 387 KSISININNVMSNSFG-FSGINSSIILC 413 (415)
Q Consensus 387 ~~~~~~~~~~~v~s~g-~gG~~~~~vl~ 413 (415)
...+.+++.+.| .+|.+..+|++
T Consensus 379 ----~~~~~~l~~~~gg~~~~~~~~i~~ 402 (403)
T PRK06289 379 ----EGAKTFGTLNIGGSTTTTVSFVVG 402 (403)
T ss_pred ----CchheEEEEecCcccceEEEEEEe
Confidence 113456677765 55566666664
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-21 Score=187.68 Aligned_cols=275 Identities=14% Similarity=0.136 Sum_probs=184.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+++++||+|+|+++++ ++ .+++|....... ...++..++...|
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~--Id----~vi~G~~~~~~~-------------------------~~~~ar~~~l~aG 79 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKL--IE----QLVFGQVVQMPE-------------------------APNIAREIVLGTG 79 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeccCcCc-------------------------cchHHHHHHHhCC
Confidence 4689999999999999999988 87 477773221000 0134556666678
Q ss_pred CC-C-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCC-HHHHH--------H------HHH-c------c-
Q psy5222 157 IR-G-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLS-PMEIQ--------A------FHA-I------G- 211 (415)
Q Consensus 157 l~-G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~-~~~~~--------~------~~~-~------~- 211 (415)
+. + |.++|+.+|+||+.|+..|+++|++|.+|++||+|+|++.. |..+. . +.. . +
T Consensus 80 l~~~~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (430)
T TIGR02446 80 MNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGL 159 (430)
T ss_pred CCCCCchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchh
Confidence 86 4 99999999999999999999999999999999999996542 11000 0 000 0 0
Q ss_pred --ccc-C--------CCCC-----------------------------C-----------------CCCCcc-------c
Q psy5222 212 --AMG-G--------KNFY-----------------------------N-----------------FPKKTC-------R 227 (415)
Q Consensus 212 --~ls-~--------~~~~-----------------------------~-----------------~~~~~~-------~ 227 (415)
.+. . ...+ . .|.... |
T Consensus 160 ~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a~~~~~D~~~r 239 (430)
T TIGR02446 160 KDLMPVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNIR 239 (430)
T ss_pred hhhcccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCceEecccCCCC
Confidence 000 0 0000 0 121111 1
Q ss_pred C-------------CC------CCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHH
Q psy5222 228 P-------------FD------KLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVM 288 (415)
Q Consensus 228 p-------------fd------~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~ 288 (415)
+ |+ ...+...++|||+++||.+++.|++.+.++.++|.+++......... .......++
T Consensus 240 ~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~--~~~~~~~a~ 317 (430)
T TIGR02446 240 HNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQD--MLMGPSYAT 317 (430)
T ss_pred CCCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHh--hcccHHHHH
Confidence 0 11 12334557999999999999999998888888999988653221101 112235789
Q ss_pred HHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHH----HhcC------------CCceeeeecccccchhHhhHHH
Q psy5222 289 NSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEV----YKNH------------FSKLLLNSTKSLTGHCLYSSGI 352 (415)
Q Consensus 289 ~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~----~~~~------------~~~~~v~~~k~~~Gh~~~asg~ 352 (415)
+++|++||++++|||++|+|.+++. .|...++.+ |... .+++++.+..-..|||.||+|+
T Consensus 318 ~~al~~Agl~~~Did~~Ei~daFa~----~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~ 393 (430)
T TIGR02446 318 PLALQRAGLALSDLTLIDMHEAFAA----QTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGA 393 (430)
T ss_pred HHHHHHcCCCHHHCCEEEeccccHH----HHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHH
Confidence 9999999999999999999988874 344444443 2111 1144555555556999999999
Q ss_pred HHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 353 VEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 353 ~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
.+++++++||+..-- ++.+......||...++|+|+
T Consensus 394 ~~v~e~~~qL~g~ag--------------------------~~g~~~~~~~GG~g~a~iie~ 429 (430)
T TIGR02446 394 RMITQTLRELKRRGG--------------------------GLGLNTACAAGGLGAAMILEV 429 (430)
T ss_pred HHHHHHHHHHhhcCC--------------------------CccEEEEEecCcceEEEEEEe
Confidence 999999999985210 122445556677888888886
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-20 Score=179.58 Aligned_cols=278 Identities=13% Similarity=0.145 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHHhCC-CCC-CCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHH
Q psy5222 77 FIQTSIIAALQAWYNSK-LHK-KKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEI 154 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag-~~~-~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 154 (415)
...|+.+|+.+||+||| +++ ++ +| ++++++..... .. ......++..
T Consensus 25 ~~eL~~eA~~~Al~DAG~l~~~~d--Id----~~~~~~~~~~~-~~------------------------~~~~~~~~~~ 73 (385)
T PRK06066 25 FREMMFEAASRAYKDAGNINPRRD--VD----SFISCQEDFWE-GI------------------------AIADEFAPDQ 73 (385)
T ss_pred HHHHHHHHHHHHHHhcCCCCChhc--CC----EEEEecCcccC-cc------------------------cccchhHHHH
Confidence 46899999999999999 986 67 77 56665311000 00 0011245677
Q ss_pred hCCCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH------------------------HHHHHH
Q psy5222 155 FNIRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME------------------------IQAFHA 209 (415)
Q Consensus 155 lgl~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~------------------------~~~~~~ 209 (415)
+|+++ |.+.+ |+|+..++..|++.|++|.+|+|||.|++.+..... +..+..
T Consensus 74 lg~~~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a 150 (385)
T PRK06066 74 IGGAMRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDA 150 (385)
T ss_pred cccCCCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHH
Confidence 88854 77665 889999999999999999999999999884322000 000000
Q ss_pred ccccc-------------CCCC---CCCCCCcc----------------cCCCCCCCCccccceEEEEEeCChhhHHhcC
Q psy5222 210 IGAMG-------------GKNF---YNFPKKTC----------------RPFDKLAEGFIYGQASAALLIEGNKNIKILN 257 (415)
Q Consensus 210 ~~~ls-------------~~~~---~~~~~~~~----------------~pfd~~~~G~~~geGa~alvL~~~~~A~~~g 257 (415)
...+. .++. ..+|.... -|+. ..+...++|||+++||.+++.|++.+
T Consensus 151 ~rym~~yG~t~E~lA~Vavk~r~nA~~NP~A~~r~~~t~edvl~S~~ia~Pl~-~~d~~~~~DGAaAvvl~s~~~a~~l~ 229 (385)
T PRK06066 151 VKFMSRKGITREDLALVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLT-ELDIAPFVDGAIVVVLASEEVAKKLT 229 (385)
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCch-hhccCCCCCceEEEEEeCHHHHHhcC
Confidence 00000 0000 01122111 1111 13555689999999999999999887
Q ss_pred CeeEEEEEeEEeccCCCCC--CC-CCHHHHHHHHHHHHHHcCCC--CCcccEEEecCCCCCCCCHHHHHHHHHH-HhcCC
Q psy5222 258 KSYLARLLGGVINLHATAS--PE-PNLNNEISVMNSVLKQSGLK--KNMIDYLNTHGSSSPLGDKIEISAIKEV-YKNHF 331 (415)
Q Consensus 258 ~~i~a~i~g~~~~~~~~~~--~~-~~~~~~~~~~~~aL~~Agl~--~~dId~v~~h~~gt~~~d~~E~~al~~~-~~~~~ 331 (415)
.++. +|+|++...+.... .. ......+.+.+++|++||++ ++|||++|+|++.+. .|...++.+ |..++
T Consensus 230 ~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft~----~~l~~~e~lG~~~~G 304 (385)
T PRK06066 230 DDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYSY----KELQHIEALRLSEEP 304 (385)
T ss_pred CCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCChH----HHHHHHHHcCCCCCC
Confidence 7764 99999886543222 11 12344457999999999998 699999999998884 344444433 22211
Q ss_pred C--------------ceee--eecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCE
Q psy5222 332 S--------------KLLL--NSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININN 395 (415)
Q Consensus 332 ~--------------~~~v--~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~ 395 (415)
+ ++|+ ++.--..|||.||+|+.+++++++||+...=. ++ .+.++
T Consensus 305 e~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~Ag~-----------------rQ---~~a~~ 364 (385)
T PRK06066 305 EKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGEAGA-----------------RQ---GKAER 364 (385)
T ss_pred chHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHcccccc-----------------cC---CCCcE
Confidence 1 2344 44444459999999999999999999864210 11 12467
Q ss_pred EEEeccC--cCCceeEEEEee
Q psy5222 396 VMSNSFG--FSGINSSIILCK 414 (415)
Q Consensus 396 ~~v~s~g--~gG~~~~~vl~~ 414 (415)
+++.+.| .++..+.+|+|+
T Consensus 365 ~l~~~~gg~~~~~~~v~v~~~ 385 (385)
T PRK06066 365 AVVASWRGIPTLTGSVVVVER 385 (385)
T ss_pred EEEcCCCccCCccEEEEEEeC
Confidence 8887776 556777777764
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.5e-21 Score=183.94 Aligned_cols=281 Identities=12% Similarity=0.044 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHH-HHHHHh
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIG-IMSEIF 155 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~ia~~l 155 (415)
..+|+..++++||+++|+++++ +| .+++|+...... . . .++. .+...+
T Consensus 23 ~~el~~~a~~~Al~~agl~p~d--ID----~vi~g~~~~~~~----------------------g--~-~~~~~~~~~~l 71 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGA--VE----EACLGQVLGAGE----------------------G--Q-NCAQQAAMHAG 71 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEEccCCcc----------------------c--C-cHHHHHHHHcC
Confidence 4688999999999999999988 77 577774322110 0 0 1111 255667
Q ss_pred CCCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHH----------HHHH-H----------------
Q psy5222 156 NIRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPM----------EIQA-F---------------- 207 (415)
Q Consensus 156 gl~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~----------~~~~-~---------------- 207 (415)
|+.+ |+++|+++|+|++.||..|+++|++|++|++||+|+|.+.... .+.. +
T Consensus 72 g~~~~p~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~~~ 151 (393)
T cd00826 72 GLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQAG 151 (393)
T ss_pred CCCCCcEEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHHHH
Confidence 8766 9999999999999999999999999999999999999643211 0000 0
Q ss_pred ----HHccc-------ccCCC---C---CCCCCCcc------------cC-C---C--CCCCCccccceEEEEEeCChhh
Q psy5222 208 ----HAIGA-------MGGKN---F---YNFPKKTC------------RP-F---D--KLAEGFIYGQASAALLIEGNKN 252 (415)
Q Consensus 208 ----~~~~~-------ls~~~---~---~~~~~~~~------------~p-f---d--~~~~G~~~geGa~alvL~~~~~ 252 (415)
.+.|. ++.++ . ..+|.... +| | + ...+...++|||+++||.+++.
T Consensus 152 ~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~~~ 231 (393)
T cd00826 152 AEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAE 231 (393)
T ss_pred HHHHHHcCCCHHHEEEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecHHH
Confidence 00010 00000 0 00111111 11 1 0 1123345689999999999999
Q ss_pred HHhcCC-eeEEEEEeEEeccCCCCC-CC------CCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHH
Q psy5222 253 IKILNK-SYLARLLGGVINLHATAS-PE------PNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIK 324 (415)
Q Consensus 253 A~~~g~-~i~a~i~g~~~~~~~~~~-~~------~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~ 324 (415)
|++.+. ...++|.+.+...+.... .. ....+...+++++|++||++++|||++|+|+.++. .|...++
T Consensus 232 a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~Fa~----~~l~~~e 307 (393)
T cd00826 232 AQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAA----NACATNE 307 (393)
T ss_pred HHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhhhHH----HHHHHHH
Confidence 998774 122445554433322111 11 12345689999999999999999999999987763 3444444
Q ss_pred HH-HhcCC----------------CceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCc
Q psy5222 325 EV-YKNHF----------------SKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKK 387 (415)
Q Consensus 325 ~~-~~~~~----------------~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~ 387 (415)
.+ |...+ .+++..+.--..|||.||+|+.+++.+++||+...= -++.
T Consensus 308 ~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g~ag-----~~q~----------- 371 (393)
T cd00826 308 ALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGEAG-----KRQG----------- 371 (393)
T ss_pred HhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhhhhc-----cccC-----------
Confidence 43 22211 134444444445999999999999999999975211 0011
Q ss_pred ccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 388 SISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 388 ~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+.+++++.+.| |..+++|++
T Consensus 372 ---~~~~~~~~~~~G--g~g~a~~~~ 392 (393)
T cd00826 372 ---AGAGLALLCIGG--GGGAAMCIE 392 (393)
T ss_pred ---CCcCEEEEEcCC--CceeEEEEe
Confidence 123677777666 567777776
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.7e-20 Score=178.51 Aligned_cols=279 Identities=15% Similarity=0.126 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+.+||+|||+++++ +| +++...... . .....++..+|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~d--ID----~~~~~~~~~--------------------~---------~~~~~~~~~lG 69 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLAD--VD----GYFCAGDAP--------------------G---------LGPASMVDYLG 69 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEcCCCC--------------------C---------ccHHHHHHhCC
Confidence 3689999999999999999888 87 444321000 0 00125888999
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHH---H----HH------HHHH-ccccc-------
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPM---E----IQ------AFHA-IGAMG------- 214 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~---~----~~------~~~~-~~~ls------- 214 (415)
+++ |...+..+|+|+..+|..|++.|++|.+|+|||+|+|...+.. . +. .+.. .+...
T Consensus 70 l~~~~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~ 149 (388)
T PRK08142 70 LKLRHVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMC 149 (388)
T ss_pred CCCeeeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHH
Confidence 976 7888999999999999999999999999999999988432110 0 00 0000 00000
Q ss_pred -------------------CC---CCCCCCCCc----------------ccCCCCCCCCccccceEEEEEeCChhhHHhc
Q psy5222 215 -------------------GK---NFYNFPKKT----------------CRPFDKLAEGFIYGQASAALLIEGNKNIKIL 256 (415)
Q Consensus 215 -------------------~~---~~~~~~~~~----------------~~pfd~~~~G~~~geGa~alvL~~~~~A~~~ 256 (415)
.. +...+|... +.|+. .-+...++|||+++||.+++.|++.
T Consensus 150 a~~ym~~yG~t~e~la~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~-l~d~~~~~DGAaA~vl~s~~~A~~l 228 (388)
T PRK08142 150 AMRHMHEYGTTSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLH-RLDCCVVTDGGGALVVVRPEIARSL 228 (388)
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCch-hhccCcccCceEEEEEecHHHHhhc
Confidence 00 000122211 11222 1355667999999999999999987
Q ss_pred CCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHH-HhcC---
Q psy5222 257 NKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEV-YKNH--- 330 (415)
Q Consensus 257 g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~-~~~~--- 330 (415)
+ ++.++|.|++..++.... ..........+++++|++||++++|||++|+|++++. .|...++.+ |..+
T Consensus 229 ~-~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~----~~~~~~E~lGl~~~Ge~ 303 (388)
T PRK08142 229 K-RPLVKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTI----TVLMQLEDLGFCKKGEG 303 (388)
T ss_pred C-CCCEEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchH----HHHHHHHHcCCCCCCch
Confidence 6 456899999988765433 2223455678999999999999999999999999885 344444433 2111
Q ss_pred ------C------Cceeeeecccc--cchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEE
Q psy5222 331 ------F------SKLLLNSTKSL--TGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNV 396 (415)
Q Consensus 331 ------~------~~~~v~~~k~~--~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 396 (415)
. -.+|++..-+. .||+.+|+|+.++++++.||+...-++ ++. ...+++
T Consensus 304 ~~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ag~~----rQV--------------~~a~~g 365 (388)
T PRK08142 304 GKFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAHPA----VQV--------------PNCDLA 365 (388)
T ss_pred HHHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCCCCCC----CCC--------------CCCcEE
Confidence 0 13555333333 499999999999999999998531110 011 124788
Q ss_pred EEeccCc-C---CceeEEEEee
Q psy5222 397 MSNSFGF-S---GINSSIILCK 414 (415)
Q Consensus 397 ~v~s~g~-g---G~~~~~vl~~ 414 (415)
++.+.|- . +.++.+||++
T Consensus 366 l~~~~Gg~~~~~~~~~~~vl~~ 387 (388)
T PRK08142 366 LAHGTGGLLGSRHGSATLILER 387 (388)
T ss_pred EEeCCCCCCcCCCceEEEEEec
Confidence 8888762 2 2346777664
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.8e-20 Score=175.49 Aligned_cols=267 Identities=13% Similarity=0.090 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCC
Q psy5222 78 IQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNI 157 (415)
Q Consensus 78 ~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 157 (415)
.+|+..+.+++++ |++ ++ +| .+++|...+.. ..++..++...|+
T Consensus 26 ~~L~~~a~~~~~~--gi~-~~--Id----~vi~G~~~~~~---------------------------~~~~r~~~~~~Gl 69 (361)
T PRK06690 26 QQLAAPLLTFLSK--GME-RE--ID----DVILGNVVGPG---------------------------GNVARLSALEAGL 69 (361)
T ss_pred HHHHHHHHHHHHc--cch-hh--cC----EEEEEecCCCc---------------------------chHHHHHHHHcCC
Confidence 5788888888744 885 66 77 57777432110 1234457788888
Q ss_pred C-C-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH--HHHH------------------HHccc---
Q psy5222 158 R-G-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME--IQAF------------------HAIGA--- 212 (415)
Q Consensus 158 ~-G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~--~~~~------------------~~~~~--- 212 (415)
. + |+++|+++|+||+.|+..|+++|++|++|++||+|+|.+..... ...+ .+.+.
T Consensus 70 ~~~~p~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre 149 (361)
T PRK06690 70 GLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITRE 149 (361)
T ss_pred CCCCCceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHH
Confidence 6 4 99999999999999999999999999999999999996643211 0000 00000
Q ss_pred -------ccCCCC---CCCCC--------------------------Cc-ccCCCC-----CCCCccccceEEEEEeCCh
Q psy5222 213 -------MGGKNF---YNFPK--------------------------KT-CRPFDK-----LAEGFIYGQASAALLIEGN 250 (415)
Q Consensus 213 -------ls~~~~---~~~~~--------------------------~~-~~pfd~-----~~~G~~~geGa~alvL~~~ 250 (415)
.+.++. ..++. .. ...|+. ..+...++|||+++||+++
T Consensus 150 ~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~ 229 (361)
T PRK06690 150 MQDEYACLSYKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEE 229 (361)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecH
Confidence 000000 01010 00 112321 1233447999999999999
Q ss_pred hhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcC
Q psy5222 251 KNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNH 330 (415)
Q Consensus 251 ~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~ 330 (415)
+.|++.+.++.++|.+++....... ....+...+++++|+++|++++|||++|+|...+. .+...+ +.++-.
T Consensus 230 e~A~~lg~~p~~~i~~~~~~~~~~~---~~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~----~~~~~~-e~lgl~ 301 (361)
T PRK06690 230 GQARKLGYKPVLRFVRSAVVGVDPN---LPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFAS----KVVACA-KELQIP 301 (361)
T ss_pred HHHHHcCCCceEEEEEEEEeccCcc---cchhHHHHHHHHHHHHcCCCHHHcCEeeecchhHH----HHHHHH-HhcCCC
Confidence 9999999888889999886542211 12456788999999999999999999999955542 122222 223322
Q ss_pred CCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEE
Q psy5222 331 FSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSI 410 (415)
Q Consensus 331 ~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~ 410 (415)
..++++.+....+||+.|++|+.+++.++.+|++. ..++.+.....-||.-.++
T Consensus 302 ~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~--------------------------~~~~g~~~~c~~gG~g~a~ 355 (361)
T PRK06690 302 YEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRE--------------------------DMKYGIATLGIGGGIGLAL 355 (361)
T ss_pred chhcccCCcHHhccCchhhhHHHHHHHHHHHHHHh--------------------------CCCEEEEEEcccCcceeEE
Confidence 23677777777889999999999999999999752 1366777777788999999
Q ss_pred EEee
Q psy5222 411 ILCK 414 (415)
Q Consensus 411 vl~~ 414 (415)
|+|+
T Consensus 356 ~~e~ 359 (361)
T PRK06690 356 LFEK 359 (361)
T ss_pred EEEe
Confidence 9986
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-20 Score=182.15 Aligned_cols=280 Identities=14% Similarity=0.053 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHH--
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEI-- 154 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~-- 154 (415)
...|+..++++||+++|+++++ +| .+++|....... . ..++..++..
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~--Id----~vv~G~~~~~~~-~------------------------~~~~r~~~l~~g 79 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGER--LG----EVVAGAVLKHSR-D------------------------FNLTRECVLGSA 79 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecccCCc-c------------------------ccHHHHHHHHcC
Confidence 3689999999999999999988 88 577773221000 0 0133344444
Q ss_pred hCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHH-------------------------HHH
Q psy5222 155 FNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQA-------------------------FHA 209 (415)
Q Consensus 155 lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~-------------------------~~~ 209 (415)
++...|+++|+++|+||+.++..|+++|++|.+|++||+|+|.+........ +..
T Consensus 80 l~~~~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (427)
T PRK09268 80 LSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRP 159 (427)
T ss_pred CCCCCceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCccccccccccc
Confidence 4446799999999999999999999999999999999999996543211000 000
Q ss_pred c------cccc--CCCC-C------------------------------C-----------CCCC------ccc------
Q psy5222 210 I------GAMG--GKNF-Y------------------------------N-----------FPKK------TCR------ 227 (415)
Q Consensus 210 ~------~~ls--~~~~-~------------------------------~-----------~~~~------~~~------ 227 (415)
. .... .... . . .|.. ..|
T Consensus 160 ~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~~~~~D~~~r~~~t~e 239 (427)
T PRK09268 160 KHLAPEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTRDNNLRPDSSLE 239 (427)
T ss_pred ccccccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCccCcccCCCCCCCCCHH
Confidence 0 0000 0000 0 1 2321 222
Q ss_pred -------CCCC-------CCCCccccceEEEEEeCChhhHHhcCCeeEEEE-EeEEeccCCCCCCCCCHHHHHHHHHHHH
Q psy5222 228 -------PFDK-------LAEGFIYGQASAALLIEGNKNIKILNKSYLARL-LGGVINLHATASPEPNLNNEISVMNSVL 292 (415)
Q Consensus 228 -------pfd~-------~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i-~g~~~~~~~~~~~~~~~~~~~~~~~~aL 292 (415)
.|+. ..+...++|||+++||.+++.|++.+.++.++| .+.....+..............+++++|
T Consensus 240 ~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~a~ 319 (427)
T PRK09268 240 KLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEGLLMAPAYAVPRLL 319 (427)
T ss_pred HHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccchhhccHHHHHHHHH
Confidence 1222 123345799999999999999999888887666 5555445532211111234467999999
Q ss_pred HHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHH-Hhc------------CCCceeeeecccccchhHhhHHHHHHHHHH
Q psy5222 293 KQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEV-YKN------------HFSKLLLNSTKSLTGHCLYSSGIVEIIASV 359 (415)
Q Consensus 293 ~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~-~~~------------~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~ 359 (415)
++||++++|||++|+|..++. ....|...++.+ |.+ +..+++.++.--.+|||.||+|+.++++++
T Consensus 320 ~~AGl~~~Did~~Ei~d~Fa~-~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~~~v~e~~ 398 (427)
T PRK09268 320 ARNGLTLQDFDFYEIHEAFAS-QVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLA 398 (427)
T ss_pred HHcCCCHHHCCEEEeccccHH-HHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccchHHHHHHHH
Confidence 999999999999999988873 222233223211 110 111333343334459999999999999999
Q ss_pred HHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 360 IQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 360 ~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
.||+.+ ..++.+++...-||.-.++|||+
T Consensus 399 ~QL~~~--------------------------~~~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 399 KLLAEK--------------------------GSGRGLISICAAGGQGVTAILER 427 (427)
T ss_pred HHHHhc--------------------------CCCEEEEEEcccCchheEEEEeC
Confidence 999752 13678888888899999999985
|
|
| >KOG1390|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-21 Score=174.02 Aligned_cols=244 Identities=16% Similarity=0.098 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
+..+|+..|++.||+++.+++++ ++.-..|.++....| -.++.+.+..-
T Consensus 29 ~A~~Lgsvaikaalera~v~~~~--v~eVi~GnVl~AnlG-----------------------------QapaRQaalgA 77 (396)
T KOG1390|consen 29 TATELGSVAIKAALERAVVPPSD--VAEVIFGNVLSANLG-----------------------------QAPARQAALGA 77 (396)
T ss_pred chhhHHHHHHHHHHHhcCCCHHH--hhhhhhccccccccC-----------------------------cchHHHHHhhc
Confidence 45689999999999999998887 665444544442211 14456777776
Q ss_pred CC--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcc----------------------
Q psy5222 156 NI--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIG---------------------- 211 (415)
Q Consensus 156 gl--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~---------------------- 211 (415)
|| .-|+.|++--|+||+.|+.+|++.|+.|..|+|++||.|++...+.+ ...+.+
T Consensus 78 Glp~sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~-~~~R~g~~~G~~~l~Dgi~~DGL~D~y~ 156 (396)
T KOG1390|consen 78 GLPYSVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYL-YVARGGVKYGGVQLVDGIVKDGLTDAYD 156 (396)
T ss_pred CCCcceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcch-hhhccCcCcCCeeeeechhhcchHHHhc
Confidence 76 45899999999999999999999999999999999999977655522 111110
Q ss_pred -----cccCC-----------CCC---------------------------------------CCCCC--------cccC
Q psy5222 212 -----AMGGK-----------NFY---------------------------------------NFPKK--------TCRP 228 (415)
Q Consensus 212 -----~ls~~-----------~~~---------------------------------------~~~~~--------~~~p 228 (415)
.-.++ .+. +.+.+ ..+|
T Consensus 157 ~~~MG~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~ 236 (396)
T KOG1390|consen 157 KCHMGICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRP 236 (396)
T ss_pred cCCcchhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccc
Confidence 00000 000 11111 1122
Q ss_pred CCCCCCC-------ccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCc
Q psy5222 229 FDKLAEG-------FIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNM 301 (415)
Q Consensus 229 fd~~~~G-------~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~d 301 (415)
.-....| ..+.|||+++||.+.+.+.+.|.+|+|+|.+|+-+...... -..+...++.++|++||+..+|
T Consensus 237 vF~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~d---f~iaP~laipk~lk~aG~~~sd 313 (396)
T KOG1390|consen 237 VFKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPID---FTIAPALAIPKALKKAGLEQSD 313 (396)
T ss_pred eeecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhh---cccchHHHHHHHHHHcCcchhh
Confidence 1111222 23689999999999999999999999999999865422111 1223467899999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHH-----HHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhc
Q psy5222 302 IDYLNTHGSSSPLGDKIEISAI-----KEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRK 364 (415)
Q Consensus 302 Id~v~~h~~gt~~~d~~E~~al-----~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~ 364 (415)
||++|.+ |+.+. -+.++-+.+.+++.+..-.+|||+|+||..-++..++.|++
T Consensus 314 Vd~~EiN----------EAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 314 VDYWEIN----------EAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred hhHHhhh----------hhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHh
Confidence 9999988 44443 33444444567888888889999999999999999999987
|
|
| >KOG1406|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-21 Score=169.76 Aligned_cols=250 Identities=14% Similarity=0.187 Sum_probs=176.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCC
Q psy5222 79 QTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIR 158 (415)
Q Consensus 79 ~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 158 (415)
.++-+|...||.|+++..++ ++...+|.++|.+...+ +.-+.+|++
T Consensus 31 d~a~ea~tkal~da~ikys~--vqqa~vgyvfgdstcgq--------------------------------raiyevgmt 76 (408)
T KOG1406|consen 31 DFAKEAITKALQDAGIKYSE--VQQAVVGYVFGDSTCGQ--------------------------------RAIYEVGMT 76 (408)
T ss_pred hHHHHHHHHHHHhcCCCHHH--HHhhhheeeecCCccch--------------------------------HHHHhcccc
Confidence 67889999999999999999 99999999999443322 444678999
Q ss_pred C-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCC------------------
Q psy5222 159 G-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFY------------------ 219 (415)
Q Consensus 159 G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~------------------ 219 (415)
| |.+.|++.|++|..||.+|.+.|++|.+|+||+.|+| .+.+..+......+.++.+.+.
T Consensus 77 gipi~nvnnncatgssalflakqiiesgn~dcvlalgfe-km~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqm 155 (408)
T KOG1406|consen 77 GIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFE-KMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQM 155 (408)
T ss_pred CcceeeccCccccCchHHHHHHHHHhcCCcceEEeechh-hhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHH
Confidence 9 9999999999999999999999999999999999999 4443333222112211111000
Q ss_pred -------------------------CCCCCcccCCCCCCCC---------------------ccccceEEEEEeCChhhH
Q psy5222 220 -------------------------NFPKKTCRPFDKLAEG---------------------FIYGQASAALLIEGNKNI 253 (415)
Q Consensus 220 -------------------------~~~~~~~~pfd~~~~G---------------------~~~geGa~alvL~~~~~A 253 (415)
...+....||.+-++- ..-+||+++.+|.++...
T Consensus 156 fgnagkehmekygtk~ehfakiawknhkhsvnnpysqf~deysldqvm~s~~v~dflt~lqccptsdgaaaailaseafv 235 (408)
T KOG1406|consen 156 FGNAGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDFLTKLQCCPTSDGAAAAILASEAFV 235 (408)
T ss_pred hhhhHHHHHHHhCCCHHHHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHHHHHhhcCCCCCchHHHHHhHHHHH
Confidence 0111222344333322 235999999999999998
Q ss_pred HhcCCeeEE-EEEeEEeccCCCCCCCC-------CHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHH
Q psy5222 254 KILNKSYLA-RLLGGVINLHATASPEP-------NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKE 325 (415)
Q Consensus 254 ~~~g~~i~a-~i~g~~~~~~~~~~~~~-------~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~ 325 (415)
++.|..-.+ +|.|.-+..|..+.... ...-.+.+.++.+++.|++|+||++||+|++.. .++.+-.+||.-
T Consensus 236 ~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdcfs-~nelityealgl 314 (408)
T KOG1406|consen 236 RKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDCFS-ANELITYEALGL 314 (408)
T ss_pred HhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeecccc-hhhhhhHHHhcC
Confidence 888765443 67777777776554111 133457888999999999999999999999998 466666666642
Q ss_pred HHh-------cCC-----Cceeeeeccccc--chhHhhHHHHHHHHHHHHhhc
Q psy5222 326 VYK-------NHF-----SKLLLNSTKSLT--GHCLYSSGIVEIIASVIQMRK 364 (415)
Q Consensus 326 ~~~-------~~~-----~~~~v~~~k~~~--Gh~~~asg~~~l~~~~~~l~~ 364 (415)
+-. ++. -.+.++...+++ |||+||+|+.+.++...+||-
T Consensus 315 cpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwqlrg 367 (408)
T KOG1406|consen 315 CPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRG 367 (408)
T ss_pred CCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHHhh
Confidence 211 011 123333333333 999999999999999999984
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.3e-21 Score=183.49 Aligned_cols=252 Identities=15% Similarity=0.110 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++|+++++ ++ .+++++..... . ....+..++..+
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~--Id----~li~~~~~~~~--------------------~-----~p~~a~~v~~~L 142 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAED--ID----AVIVACSNMQR--------------------A-----YPAMAIEIQQAL 142 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEECCCCCC--------------------C-----CcHHHHHHHHhc
Confidence 34689999999999999999888 76 57776432100 0 012456899999
Q ss_pred CCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCC
Q psy5222 156 NIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEG 235 (415)
Q Consensus 156 gl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G 235 (415)
|++++++++..+|+|++.||..|.++|++|.+|.|||+++|.+... .-|+....+
T Consensus 143 gl~~~~~~v~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-------------------------~~~~d~~~~ 197 (372)
T PRK07515 143 GIEGFAFDMNVACSSATFGIQTAANAIRSGSARRVLVVNPEICSGH-------------------------LNFRDRDSH 197 (372)
T ss_pred CCCCcEEEecchhHHHHHHHHHHHHHHHcCCCCEEEEEeeeccccc-------------------------ccccCCCCC
Confidence 9999999999999999999999999999999999999999942100 001222357
Q ss_pred ccccceEEEEEeCChhhHHhcC-CeeEEEEEeE------------EeccCCCCCCCC------CHH--------HHHHHH
Q psy5222 236 FIYGQASAALLIEGNKNIKILN-KSYLARLLGG------------VINLHATASPEP------NLN--------NEISVM 288 (415)
Q Consensus 236 ~~~geGa~alvL~~~~~A~~~g-~~i~a~i~g~------------~~~~~~~~~~~~------~~~--------~~~~~~ 288 (415)
+++||||+|+||++.+.+..++ ..++...... ....+..+...+ ++. .+.+++
T Consensus 198 ~lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i 277 (372)
T PRK07515 198 FIFGDVATAVIVERADTATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHI 277 (372)
T ss_pred EEecCccEEEEEeeccccccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHH
Confidence 9999999999999876653322 2454443111 100111111111 222 257899
Q ss_pred HHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccC
Q psy5222 289 NSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIH 368 (415)
Q Consensus 289 ~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip 368 (415)
+++|+++|++++|||+|.+|.+++...|.+ ++++|+.....-.....-..+||+.+|+=.+.+-.+ + +.+
T Consensus 278 ~~~L~~~gl~~~dId~~~~Hq~~~~~~d~~----~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~~----~-~~~- 347 (372)
T PRK07515 278 VEHLAENGLTPADVKRFWLHQANINMNQLI----GKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHKH----S-DDL- 347 (372)
T ss_pred HHHHHHcCCCHHHCCEEEECCCCHHHHHHH----HHHhccCCCChhhceEeHHhcCCchhhHHHHHHHHH----h-ccC-
Confidence 999999999999999999999999877654 334444221111111234667999999865544432 1 111
Q ss_pred CCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 369 PNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 369 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
.+.+.++..+||.|-+-+++||+|.
T Consensus 348 ----------------------~~Gd~vll~~~G~G~~~~~~ll~~~ 372 (372)
T PRK07515 348 ----------------------AAGDLGVICSFGAGYSIGSVIVRKR 372 (372)
T ss_pred ----------------------CCCCEEEEEEecccHHHHHHHhccC
Confidence 1247788999999988888888763
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.9e-18 Score=169.44 Aligned_cols=253 Identities=15% Similarity=0.076 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHHHHhCCCC--CCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHH
Q psy5222 77 FIQTSIIAALQAWYNSKLH--KKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEI 154 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~--~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 154 (415)
...|+.+|+++||+|||++ +++ || +++++...... .+.....++..
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~d--ID----~v~v~~~~~~~--------------------------~~~~~~~la~~ 74 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEA--ID----SVAVVNQLSWR--------------------------YRDPPGLLAER 74 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHH--CC----EEEEecccccc--------------------------ccCHHHHHHHH
Confidence 3589999999999999998 888 87 56665321100 01234678899
Q ss_pred hCCCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHH----------------------------
Q psy5222 155 FNIRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQ---------------------------- 205 (415)
Q Consensus 155 lgl~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~---------------------------- 205 (415)
+|+.. +......+++++..+|..|++.|++|++|+|||+|+|.+.+...+.
T Consensus 75 lGl~p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (498)
T PRK08257 75 LGADPARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMAS 154 (498)
T ss_pred cCCCCcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccc
Confidence 99964 4444556788889999999999999999999999999532211000
Q ss_pred HHH-HcccccCCCCC----------------------------------CCCC--------------------CcccCCC
Q psy5222 206 AFH-AIGAMGGKNFY----------------------------------NFPK--------------------KTCRPFD 230 (415)
Q Consensus 206 ~~~-~~~~ls~~~~~----------------------------------~~~~--------------------~~~~pfd 230 (415)
.+. ..+.......+ .+|. --+-||.
T Consensus 155 ~~e~~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~ 234 (498)
T PRK08257 155 PAELRHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYT 234 (498)
T ss_pred hhhhhcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCcc
Confidence 000 00000000000 0111 1122333
Q ss_pred CCCCCccccceEEEEEeCChhhHHhcCC--eeEEEEEeEEeccCCCCC-CCC---CHHHHHHHHHHHHHHcCCCCCcccE
Q psy5222 231 KLAEGFIYGQASAALLIEGNKNIKILNK--SYLARLLGGVINLHATAS-PEP---NLNNEISVMNSVLKQSGLKKNMIDY 304 (415)
Q Consensus 231 ~~~~G~~~geGa~alvL~~~~~A~~~g~--~i~a~i~g~~~~~~~~~~-~~~---~~~~~~~~~~~aL~~Agl~~~dId~ 304 (415)
.--+....+||++++||.+++.|++.+. .-.++|.|++..++.... ..+ .......+.+++|++||++++|||+
T Consensus 235 ~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~ 314 (498)
T PRK08257 235 KLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDA 314 (498)
T ss_pred HhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCE
Confidence 3222223799999999999999998772 225789999988775443 111 2345567999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHH-HhcC-CCceeeeecccccchhHhhHHHHHHHHHHHHhhcC
Q psy5222 305 LNTHGSSSPLGDKIEISAIKEV-YKNH-FSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKK 365 (415)
Q Consensus 305 v~~h~~gt~~~d~~E~~al~~~-~~~~-~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~ 365 (415)
+++|++++. .|...++.+ |..+ ..++++++.-...||+.+++|+.++++++.||+.+
T Consensus 315 ~elydcF~~----~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~ 373 (498)
T PRK08257 315 FDLYSCFPS----AVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRAN 373 (498)
T ss_pred EEeccCCHH----HHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhc
Confidence 999999874 466666655 4433 22566666666779999999999999999999863
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.5e-18 Score=159.93 Aligned_cols=269 Identities=8% Similarity=0.032 Sum_probs=166.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|||+++++ +| +++.+... ....+ . + ....+...+|
T Consensus 24 ~~el~~eA~~~Al~DAgl~~~d--ID----~~~~~~~~-~~~~~------------~---------~---~~~~~~~~~G 72 (352)
T PRK07937 24 GVEMLMPCFAELYAELGITKSD--IG----FWCSGSSD-YLAGR------------A---------F---SFISAIDSIG 72 (352)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEccc-ccccc------------c---------c---chhhHHhhcc
Confidence 3689999999999999999999 87 45433210 00000 0 0 0012345567
Q ss_pred CC-C-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH--H--------------------HHHHHccc
Q psy5222 157 IR-G-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME--I--------------------QAFHAIGA 212 (415)
Q Consensus 157 l~-G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~--~--------------------~~~~~~~~ 212 (415)
+. + |...+. ++|..||..|+..|++|.+|+|||.|.|.+..... . ..+.....
T Consensus 73 ~~~~~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~y 149 (352)
T PRK07937 73 AVPPINESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAG 149 (352)
T ss_pred CCCCCceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHH
Confidence 63 2 344444 46888999999999999999999999884321000 0 00000000
Q ss_pred ccC-------------CC---CCCCCCCccc--------------CCCCCCCCccccceEEEEEeCChhhHHhcCCeeEE
Q psy5222 213 MGG-------------KN---FYNFPKKTCR--------------PFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLA 262 (415)
Q Consensus 213 ls~-------------~~---~~~~~~~~~~--------------pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a 262 (415)
+.. ++ ...+|....+ |+. ..+...++|||+++||.+++.|++.+.++ +
T Consensus 150 m~~yG~t~e~lA~vavk~r~nA~~NP~A~~rit~edvl~s~~ia~PL~-l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v 227 (352)
T PRK07937 150 LDAGKWTEEQMAEVAARSRADARRNPSAEPSISVDELLARPYFADPLR-RHDIAPITDGAAAVVLAAGDRARELRERP-A 227 (352)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHhhCchhhccCCHHHHhcCCcccCCch-hhcCCCCCCcceEEEEecHHHHHHcCCCc-E
Confidence 000 00 0022322222 111 13445689999999999999999988776 9
Q ss_pred EEEeEEeccCCCCCCCCCHHHHHHHHHHHHHH-cCCCCCcccEEEecCCCCCCCCHHHHHHHHHH-HhcCCCceeeeecc
Q psy5222 263 RLLGGVINLHATASPEPNLNNEISVMNSVLKQ-SGLKKNMIDYLNTHGSSSPLGDKIEISAIKEV-YKNHFSKLLLNSTK 340 (415)
Q Consensus 263 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~-Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~-~~~~~~~~~v~~~k 340 (415)
+|.|++...+.......+ .....++++++++ ||++++|||++|+|++++. .|...++.+ |..+ .+++..+.-
T Consensus 228 ~I~g~~~~~~~~~~~~~d-~~~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~----~~l~~~e~lGl~g~-~pvN~~GG~ 301 (352)
T PRK07937 228 WITGIEHRIESPSLGARD-LTRSPSTALAAEAATGGDAGGVDVAELHAPFTH----QELILREALGLGDK-TKVNPSGGA 301 (352)
T ss_pred EEEEEEEeeCCccccccc-cccHHHHHHHHHHhcCCCHHHCCEEEEeCCChH----HHHHHHHHcCCCCC-CCcCCCccc
Confidence 999998876654321111 1112334455555 5999999999999998884 344444443 2221 234433332
Q ss_pred cccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCc--CCceeEEEEee
Q psy5222 341 SLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGF--SGINSSIILCK 414 (415)
Q Consensus 341 ~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~--gG~~~~~vl~~ 414 (415)
-. ||+.||+|+.+++++++||+.+ ..+++++++.|- +..+..+|+++
T Consensus 302 l~-ghp~gatG~~~~~e~~~QL~g~--------------------------~a~~~l~~~~Gg~~~~~~~v~v~~~ 350 (352)
T PRK07937 302 LA-ANPMFAAGLERIGEAARHIWDG--------------------------SARRALAHATSGPALQQNLVAVLEG 350 (352)
T ss_pred hh-cCchhHHHHHHHHHHHHHHhcc--------------------------CCCEEEEecccccccceEEEEEEec
Confidence 23 9999999999999999999875 137788887663 45666666665
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-18 Score=164.00 Aligned_cols=245 Identities=17% Similarity=0.151 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++|+++++ ++ .+++++..+.. .....+.+++..+
T Consensus 51 ~~~~la~~Aa~~aL~~ag~~~~d--Id----~li~~~~~~~~-------------------------~~p~~a~~v~~~l 99 (329)
T PRK07204 51 TSSYMGAEAAKKAVEDAKLTLDD--ID----CIICASGTIQQ-------------------------AIPCTASLIQEQL 99 (329)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEECCCCCC-------------------------CCccHHHHHHHHh
Confidence 45789999999999999999888 76 46666432110 0125577899999
Q ss_pred CCCC---ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCC
Q psy5222 156 NIRG---EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKL 232 (415)
Q Consensus 156 gl~G---p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~ 232 (415)
|+++ |++.++.+|++++.||..|.++|++|.++.+||+++|.... ...++..
T Consensus 100 gl~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~-------------------------~~~~~~~ 154 (329)
T PRK07204 100 GLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSV-------------------------GLNWGQN 154 (329)
T ss_pred CCCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccC-------------------------CCCcccC
Confidence 9974 88899999999999999999999999999999999994111 0012223
Q ss_pred CCCccccceEEEEEeCChhhHHhcCCeeE-------------EEEEeEEeccCCCCCC---------CCC--------HH
Q psy5222 233 AEGFIYGQASAALLIEGNKNIKILNKSYL-------------ARLLGGVINLHATASP---------EPN--------LN 282 (415)
Q Consensus 233 ~~G~~~geGa~alvL~~~~~A~~~g~~i~-------------a~i~g~~~~~~~~~~~---------~~~--------~~ 282 (415)
..++++||||+|+||++.+.. .++. ..+.+.+...+..... ..+ ..
T Consensus 155 ~~~~lfGDGAaA~ll~~~~~~----~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (329)
T PRK07204 155 ESCILFGDGAAAVVITKGDHS----SRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSK 230 (329)
T ss_pred cceEEEecccEEEEEEEcCCC----CcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHH
Confidence 457899999999999976432 1222 2233222211110000 011 12
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHh
Q psy5222 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQM 362 (415)
Q Consensus 283 ~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l 362 (415)
.+.++++++|+++|++++|||++..|..+.+. ..++.+.++-..++ +......+||+.+|+=.+.+..+ +
T Consensus 231 ~~~~~i~~~L~~~gl~~~did~~~~H~~~~~~-----~~~i~~~l~l~~e~--~~~~~~~~Gn~~sas~~~~L~~~---~ 300 (329)
T PRK07204 231 YLMKFIDKLLMDAGYTLADIDLIVPHQASGPA-----MRLIRKKLGVDEER--FVTIFEDHGNMIAASIPVALFEA---I 300 (329)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH-----HHHHHHHcCCCHHH--hhhhHhhhCcHHHHHHHHHHHHH---H
Confidence 24589999999999999999999999776653 44566666543222 23566778999988766665543 3
Q ss_pred hcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 363 RKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 363 ~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+.+.+ .+.+.++..+||.|-+.++++|+
T Consensus 301 ~~g~~-----------------------~~Gd~vll~~~G~G~s~~~~ll~ 328 (329)
T PRK07204 301 KQKKV-----------------------QRGNKILLLGTSAGLSIGGILLE 328 (329)
T ss_pred HcCCC-----------------------CCCCEEEEEEEchhhhheeeEEe
Confidence 33322 12578899999999999999986
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-17 Score=160.97 Aligned_cols=244 Identities=16% Similarity=0.115 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+|||+++++ || ++++..... .....++..+|
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~d--ID----~~~~~~~~~------------------------------~~~~~l~~~lG 67 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSD--VD----GLVTFTMDT------------------------------NPEIAVARALG 67 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEecCcc------------------------------ccHHHHHHHCC
Confidence 3589999999999999999888 87 555432110 00125888999
Q ss_pred CCC--ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeec--CCCCCHH------------HH---HHHHH-ccccc--
Q psy5222 157 IRG--EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISA--MTDLSPM------------EI---QAFHA-IGAMG-- 214 (415)
Q Consensus 157 l~G--p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~--e~~~~~~------------~~---~~~~~-~~~ls-- 214 (415)
+++ +...+..+|+|+..+|..|+..|++|.+|+|||.|. +..-... .. ..+.. .+...
T Consensus 68 l~~~~~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 147 (386)
T PRK07855 68 IGELKFFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPA 147 (386)
T ss_pred CCCCcceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChH
Confidence 976 345789999999999999999999999999999987 2110000 00 00000 01000
Q ss_pred -------------------------CCC---CCCCCCCcc--cCCCC--------------CCCCccccceEEEEEeCCh
Q psy5222 215 -------------------------GKN---FYNFPKKTC--RPFDK--------------LAEGFIYGQASAALLIEGN 250 (415)
Q Consensus 215 -------------------------~~~---~~~~~~~~~--~pfd~--------------~~~G~~~geGa~alvL~~~ 250 (415)
.++ ...+|.... +|++. .-+...++|||+++||.++
T Consensus 148 ~~~al~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~~d~~~~sDGAaAvvl~se 227 (386)
T PRK07855 148 AWVAMLARRYMHEYGATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRLLDCCQESDGAVALVVTSA 227 (386)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHhhhcCCCCCHHHHhcCCcccCCchhhhcCCcCCceEEEEEecH
Confidence 000 002233222 12221 1355567999999999999
Q ss_pred hhHHhcCCeeEEEEEeEEeccCCCCC-------CCC-CHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHH
Q psy5222 251 KNIKILNKSYLARLLGGVINLHATAS-------PEP-NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISA 322 (415)
Q Consensus 251 ~~A~~~g~~i~a~i~g~~~~~~~~~~-------~~~-~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~a 322 (415)
+.|++.+.++ .+|.|++..++.... ..+ .....+.+++++|++||++++|||++|+|++++. .|...
T Consensus 228 e~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~----~~l~~ 302 (386)
T PRK07855 228 ERARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDHFTP----FVLMQ 302 (386)
T ss_pred HHHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccCCcH----HHHHH
Confidence 9998877665 699999876543211 011 1244568999999999999999999999999884 45555
Q ss_pred HHHH-HhcCC--------------Cceee---eecccccchhHhhHHHHHHHHHHHHhhcC
Q psy5222 323 IKEV-YKNHF--------------SKLLL---NSTKSLTGHCLYSSGIVEIIASVIQMRKK 365 (415)
Q Consensus 323 l~~~-~~~~~--------------~~~~v---~~~k~~~Gh~~~asg~~~l~~~~~~l~~~ 365 (415)
++.+ |..++ -.+|+ ++.++ .||+. |+.+++++++||+..
T Consensus 303 ~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~-~gh~~---G~~~i~E~~~QLrG~ 359 (386)
T PRK07855 303 LEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLG-EAYIH---GMNGIAEAVRQLRGT 359 (386)
T ss_pred HHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccc-cCchh---hHHHHHHHHHHHhCC
Confidence 4433 22111 14566 44444 48876 899999999999975
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.2e-18 Score=155.65 Aligned_cols=263 Identities=14% Similarity=0.100 Sum_probs=172.8
Q ss_pred CCccCCCCCHHHHhc-CCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCch
Q psy5222 59 LSEKKKEFILHIAQK-SPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPR 137 (415)
Q Consensus 59 ~d~~~~~~~~~~~~~-~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (415)
|-.+..++..+.... -.....|+..|+++||++||+++++ +| -+++++..+.
T Consensus 33 wI~~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~d--ID----lII~aT~tpd--------------------- 85 (323)
T COG0332 33 WIETRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDD--ID----LIIVATSTPD--------------------- 85 (323)
T ss_pred eeeeecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEcCCcc---------------------
Confidence 333333555554444 3357799999999999999999998 77 4666654321
Q ss_pred hhcccccchHHHHHHHHhCCCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCC
Q psy5222 138 YAIQFMDSNQIGIMSEIFNIRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGK 216 (415)
Q Consensus 138 ~~~~~~~~~~a~~ia~~lgl~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~ 216 (415)
.+....|..++..||+++ +.+.+..+|++.++||..|..+|++|.++.+||+|.|. +|.
T Consensus 86 ----~~~Ps~A~~vq~~LG~~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~---------------~S~- 145 (323)
T COG0332 86 ----HLFPSTACLVQARLGLGGAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAET---------------LSR- 145 (323)
T ss_pred ----cCCChHHHHHHHHhCCCCcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhH---------------hhc-
Confidence 112467889999999988 99999999999999999999999999999999999994 221
Q ss_pred CCCCCCCCcccCCCCCCCCccccceEEEEEeCChhhHHhcCCeeEE-EEEeEEe------------ccCC--C--CCCCC
Q psy5222 217 NFYNFPKKTCRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLA-RLLGGVI------------NLHA--T--ASPEP 279 (415)
Q Consensus 217 ~~~~~~~~~~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a-~i~g~~~------------~~~~--~--~~~~~ 279 (415)
..-|+.+...+.|||||+|+||++.+ .+.+ ++. .+..-+. .++. . .....
T Consensus 146 ---------~ld~~dR~t~vlFgDGAgAvvl~~~~--~~~~--i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m 212 (323)
T COG0332 146 ---------ILDWTDRDTCVLFGDGAGAVVLEATE--DDNG--ILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVM 212 (323)
T ss_pred ---------cCCHhhccceEEEcCCceEEEEecCC--CCcC--eeeeeeeccccCCCeeeccCCCCccccccccccceee
Confidence 11133345789999999999999876 1111 111 1111111 0000 0 00011
Q ss_pred --------CHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHH
Q psy5222 280 --------NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSG 351 (415)
Q Consensus 280 --------~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg 351 (415)
....+.++++++|++++++++|||++..| +....=.+++.+.++-+.+ .+...-..+|++.+||=
T Consensus 213 ~Gr~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpH-----Qan~ri~~~i~~~l~~~~~--k~~~~~~~yGNtsaAsi 285 (323)
T COG0332 213 DGREVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPH-----QANLRIIEAIAKKLGIPEE--KVVVTVDKYGNTSAASI 285 (323)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEccc-----cccHHHHHHHHHHcCCCHH--HHhhHHHHhcccccchH
Confidence 13445789999999999999999999999 3333334455555553211 22223344578877765
Q ss_pred HHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 352 IVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 352 ~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
.+.|.+ .+++|.+ .+...+++.+||-|=+-.+++++.
T Consensus 286 plaL~~---~~~~g~i-----------------------k~Gd~ill~~fG~Gltwg~~~~r~ 322 (323)
T COG0332 286 PLALDE---ALREGRI-----------------------KPGDLVLLEAFGGGLTWGAALVRW 322 (323)
T ss_pred HHHHHH---HhhhCCC-----------------------CCCCEEEEEeecCcceeeeEEEEe
Confidence 444433 2344433 124677788888777777777753
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.2e-17 Score=157.04 Aligned_cols=244 Identities=15% Similarity=0.137 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
...+|+..|+++||+++|+++++ ++ .+++++..... . . ...+.+++..+
T Consensus 51 ~~~~la~~A~~~al~~agl~~~~--id----~vi~~~~~~~~----------------~--------~-~~~~~~i~~~l 99 (319)
T PRK09352 51 TTSDLATEAAKKALEAAGIDPED--ID----LIIVATTTPDY----------------A--------F-PSTACLVQARL 99 (319)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEcCCCCC----------------C--------C-chHHHHHHHHh
Confidence 35789999999999999999888 76 57777432100 0 1 13467899999
Q ss_pred CCCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCC
Q psy5222 156 NIRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAE 234 (415)
Q Consensus 156 gl~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~ 234 (415)
|+++ |.+++..+|+|++.||..|+++|++|.+|.+||+++|.+... .. ++....
T Consensus 100 G~~~~~~~~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~------------------------~~-~~~~~~ 154 (319)
T PRK09352 100 GAKNAAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRI------------------------VD-WTDRST 154 (319)
T ss_pred CCCCCcEeeccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhccc------------------------cC-cccCCc
Confidence 9987 889999999999999999999999999999999999942110 01 111234
Q ss_pred CccccceEEEEEeCChhhHHhcCCeeE-EEEEeEEeccC-------CCCCC------CCC--------HHHHHHHHHHHH
Q psy5222 235 GFIYGQASAALLIEGNKNIKILNKSYL-ARLLGGVINLH-------ATASP------EPN--------LNNEISVMNSVL 292 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~A~~~g~~i~-a~i~g~~~~~~-------~~~~~------~~~--------~~~~~~~~~~aL 292 (415)
++++||||+++||++.+.. .+. ..+...+...+ +.... ... ...+.++++++|
T Consensus 155 ~~~~gDGaaA~ll~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 229 (319)
T PRK09352 155 CVLFGDGAGAVVLGASEEP-----GILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREAL 229 (319)
T ss_pred eEEEeccceEEEEEEcCCC-----CeEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999986542 111 11111111100 00000 000 123467899999
Q ss_pred HHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCC
Q psy5222 293 KQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLN 372 (415)
Q Consensus 293 ~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~ 372 (415)
+++|++++||+++..|..+.. -...+.+.++-..+++ ......+||+.+|+-.+.+..++ +++.+
T Consensus 230 ~~~g~~~~di~~~~~h~~~~~-----~~~~~~~~lg~~~~~~--~~~~~~~Gn~~~a~~~~~L~~~~---~~g~~----- 294 (319)
T PRK09352 230 EAAGLTPEDIDWLVPHQANLR-----IIDATAKKLGLPMEKV--VVTVDKYGNTSAASIPLALDEAV---RDGRI----- 294 (319)
T ss_pred HHcCCCHHHCCEEEECCCCHH-----HHHHHHHHhCCCHHHh--hhhHHhhCCHHHHHHHHHHHHHH---HcCCC-----
Confidence 999999999999999955443 2233444444322222 22345789999998777776444 33322
Q ss_pred CCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 373 LESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 373 ~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+.++++..++|.|-+-.+++|+
T Consensus 295 ------------------~~Gd~vll~s~G~G~~~~~~ll~ 317 (319)
T PRK09352 295 ------------------KRGDLVLLEGFGGGLTWGAALVR 317 (319)
T ss_pred ------------------CCCCEEEEEEEchhheeEEEEEE
Confidence 12478889999999999999886
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.7e-17 Score=152.48 Aligned_cols=240 Identities=16% Similarity=0.167 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..|+++||+++|+++++ ++ .+++++..... .....+.+++..+|
T Consensus 51 ~~~la~~A~~~al~~agl~~~~--Id----~~i~~~~~~~~-------------------------~~~~~a~~l~~~lG 99 (318)
T TIGR00747 51 SSTMGFEAAKRAIENAGISKDD--ID----LIIVATTTPDH-------------------------AFPSAACMVQAYLG 99 (318)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEECCCCCC-------------------------CCChHHHHHHHHhC
Confidence 4689999999999999999888 76 56666432100 01134678999999
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCC
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEG 235 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G 235 (415)
+++ |.+.+..+|++++.||..|+++|++|.++.+||+++|..... .++.+ ....
T Consensus 100 l~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~------------------------~~~~~-~~~~ 154 (318)
T TIGR00747 100 IKGIPAFDLSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSST------------------------LDWTD-RGTC 154 (318)
T ss_pred CCCCcEeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCc------------------------CCcCC-CCeE
Confidence 988 899999999999999999999999999999999999942111 11111 2235
Q ss_pred ccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC-----C----------------CC-----CHHHHHHHHH
Q psy5222 236 FIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS-----P----------------EP-----NLNNEISVMN 289 (415)
Q Consensus 236 ~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~-----~----------------~~-----~~~~~~~~~~ 289 (415)
+++||||+|+||++.+... .+ .......++... + .+ ......++++
T Consensus 155 ~~~GDGAaA~lL~~~~~~~----~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (318)
T TIGR00747 155 VLFGDGAGAVVLGESEDPG----GI----ISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVE 226 (318)
T ss_pred EEEecceeEEEEeecCCCC----cE----EEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHH
Confidence 6899999999999865421 11 111111111100 0 00 0233467789
Q ss_pred HHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCC
Q psy5222 290 SVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHP 369 (415)
Q Consensus 290 ~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~ 369 (415)
++|+++|++++||+++..|..+.+ -...+.+.++-..+++. . .-..+||+.+|+-.+.+..++ +++.+.
T Consensus 227 ~~l~~~g~~~~di~~~~~h~~~~~-----~~~~~~~~lgi~~~k~~-~-~~~~~Gn~~sas~~~~L~~~~---~~~~~~- 295 (318)
T TIGR00747 227 ETLEANGLDPEDIDWFVPHQANLR-----IIEALAKRLELDMSQVV-K-TVHKYGNTSAASIPLALDELL---RTGRIK- 295 (318)
T ss_pred HHHHHcCCCHHHCCEEEECCCCHH-----HHHHHHHHcCCCHHHee-e-hHhhhCCHHHHHHHHHHHHHH---HcCCCC-
Confidence 999999999999999999966554 23334455554333333 2 234489999998777775543 333221
Q ss_pred CCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 370 NLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 370 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+.++++..++|.|.+..+++|+
T Consensus 296 ----------------------~Gd~vll~~~G~G~t~~~~~l~ 317 (318)
T TIGR00747 296 ----------------------PGDLLLLVAFGGGLTWGAALVR 317 (318)
T ss_pred ----------------------CCCEEEEEEEehhheeeEEEEE
Confidence 2478889999999999999886
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-16 Score=151.96 Aligned_cols=244 Identities=17% Similarity=0.179 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..|+++||+++|+++++ ++ .+++++..... .....+.+++..+|
T Consensus 53 ~~~la~~A~~~al~~ag~~~~~--Id----~li~~~~~~~~-------------------------~~~~~a~~l~~~lg 101 (325)
T PRK12879 53 TSDLAIKAAERALARAGLDAED--ID----LIIVATTTPDY-------------------------LFPSTASQVQARLG 101 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEcCCCCC-------------------------CCChHHHHHHHHhC
Confidence 5689999999999999999888 76 46666432100 01235678999999
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCC
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEG 235 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G 235 (415)
++. +.+.+..+|++++.||..|.++|++|.++.+||+++|.+.. . . .++.....
T Consensus 102 ~~~~~~~~v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~-----------~-------------~-~~~~~~~~ 156 (325)
T PRK12879 102 IPNAAAFDINAACAGFLYGLETANGLITSGLYKKVLVIGAERLSK-----------V-------------T-DYTDRTTC 156 (325)
T ss_pred CCCCcEEEECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcC-----------c-------------C-CccccCce
Confidence 974 88899999999999999999999999999999999994211 0 0 11112345
Q ss_pred ccccceEEEEEeCChhhHHhcCCeeEEE-------------EEeEEeccCC-----CCCCCCC--------HHHHHHHHH
Q psy5222 236 FIYGQASAALLIEGNKNIKILNKSYLAR-------------LLGGVINLHA-----TASPEPN--------LNNEISVMN 289 (415)
Q Consensus 236 ~~~geGa~alvL~~~~~A~~~g~~i~a~-------------i~g~~~~~~~-----~~~~~~~--------~~~~~~~~~ 289 (415)
+++||||+|+||++.+.. ..+... +.+.+...+. ......+ ...+.++++
T Consensus 157 ~~~GDgAaA~ll~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 232 (325)
T PRK12879 157 ILFGDGAGAVVLEATENE----PGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGAR 232 (325)
T ss_pred EEEeecceEEEEEecCCC----CCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHH
Confidence 789999999999976531 111111 1111111000 0000011 123457889
Q ss_pred HHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCC
Q psy5222 290 SVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHP 369 (415)
Q Consensus 290 ~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~ 369 (415)
++|+++|++++|||++..|..+.+ -...+.+.++-..+++.. ....+||+.+|+-.+.+..+ ++++.+
T Consensus 233 ~~L~~~g~~~~did~~~~h~~~~~-----~~~~~~~~lg~~~~~~~~--~~~~~Gn~~sas~~~~L~~~---~~~g~~-- 300 (325)
T PRK12879 233 QVLEKAGLTKDDIDWVIPHQANLR-----IIESLCEKLGIPMEKTLV--SVEYYGNTSAATIPLALDLA---LEQGKI-- 300 (325)
T ss_pred HHHHHcCCCHHHCCEEEECCCCHH-----HHHHHHHHcCCCHHHhhh--hHhhhCchHHHHHHHHHHHH---HHcCCC--
Confidence 999999999999999999954432 234555555543223332 44678999999877776544 344322
Q ss_pred CCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 370 NLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 370 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+.++++..++|.|-+-.++|++
T Consensus 301 ---------------------~~Gd~vll~~~G~G~~~~~~l~~ 323 (325)
T PRK12879 301 ---------------------KPGDTLLLYGFGAGLTWAALLVK 323 (325)
T ss_pred ---------------------CCCCEEEEEEEchhhhhEEEEEE
Confidence 12478899999999999999986
|
|
| >KOG1391|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.2e-18 Score=147.01 Aligned_cols=250 Identities=18% Similarity=0.180 Sum_probs=174.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
+.+|...|++.||+.+++..+. +|..-+|.++.++.-.. .++.++....|
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~--VD~VI~GNV~aSSsDgI----------------------------Yl~RHvGL~~G 77 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEA--VDHVIMGNVLASSSDGI----------------------------YLARHVGLRVG 77 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhh--cceEEEeeeeeccCCce----------------------------EeeeccccccC
Confidence 4477888999999999999988 88655566655332111 11223333334
Q ss_pred C--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHH-------------------H------HHH
Q psy5222 157 I--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQ-------------------A------FHA 209 (415)
Q Consensus 157 l--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~-------------------~------~~~ 209 (415)
+ .-|..+|+.-|.|+.++|..+++.|.-|+++.+|+||+|.+...+... | +.+
T Consensus 78 vP~e~pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~k 157 (396)
T KOG1391|consen 78 VPKETPALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVK 157 (396)
T ss_pred CcCccCceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhh
Confidence 3 348899999999999999999999999999999999999543221100 0 000
Q ss_pred --cccc---------------------cCCCC-------C------------------CCCCCcccCCC-----------
Q psy5222 210 --IGAM---------------------GGKNF-------Y------------------NFPKKTCRPFD----------- 230 (415)
Q Consensus 210 --~~~l---------------------s~~~~-------~------------------~~~~~~~~pfd----------- 230 (415)
|... |...+ . -.-+++.||-.
T Consensus 158 LpMa~TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~TT~E~L~KLppv 237 (396)
T KOG1391|consen 158 LPMAMTAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQTTLEQLQKLPPV 237 (396)
T ss_pred cchhhhHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccchHHHHhhCCch
Confidence 0000 00000 0 00112222210
Q ss_pred CCCCCcc-------ccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCC--HHHHHHHHHHHHHHcCCCCCc
Q psy5222 231 KLAEGFI-------YGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPN--LNNEISVMNSVLKQSGLKKNM 301 (415)
Q Consensus 231 ~~~~G~~-------~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~--~~~~~~~~~~aL~~Agl~~~d 301 (415)
...||.+ ..|||+++++.+++..++.+.+|+++|.+++... ..|+ +-+...+++.+|+.+|++..|
T Consensus 238 FkKdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vG-----cdP~IMGIGPvPAI~~vLKksGlkl~D 312 (396)
T KOG1391|consen 238 FKKDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVG-----CDPSIMGIGPVPAISGVLKKSGLKLKD 312 (396)
T ss_pred hccCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeec-----cChhhccccCcHHHHHHHHHcCCcccc
Confidence 1234443 5799999999999999999999999999987643 2222 334477899999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 302 IDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 302 Id~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
||.+|.+....+ ...|.++.++-+.+.++++...-.+|||+|+||.......++.|+++.
T Consensus 313 iDl~EvNEAFAp-----Q~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr~ 372 (396)
T KOG1391|consen 313 IDLVEVNEAFAP-----QYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRRG 372 (396)
T ss_pred cceEEechhhch-----HHHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHcC
Confidence 999999954443 556666777666667888888889999999999999999999998753
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.7e-16 Score=151.43 Aligned_cols=237 Identities=14% Similarity=0.056 Sum_probs=153.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+++|+++++ ++ .+++++..+.. .. ...+..+...+|
T Consensus 63 ~~~La~~A~~~aL~~agi~~~d--Id----~li~~s~~~~~------------------------~~-p~~a~~v~~~Lg 111 (378)
T PRK06816 63 NAQMAAEAIRDLLDDAGFSLGD--IE----LLACGTSQPDQ------------------------LM-PGHASMVHGELG 111 (378)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEECCCCc------------------------CC-hHHHHHHHhhCC
Confidence 5689999999999999999888 76 46666432110 01 123467888999
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHH-cccccCCCCCCCCCCcccCCCCCCC
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHA-IGAMGGKNFYNFPKKTCRPFDKLAE 234 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~-~~~ls~~~~~~~~~~~~~pfd~~~~ 234 (415)
++. +.+.+..+|+|++.||..|.++|++|..+.+||+++|.+........+.. .+.+... +...++||+.+..
T Consensus 112 l~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 186 (378)
T PRK06816 112 APPIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAEL-----EENPEIAFEKDFL 186 (378)
T ss_pred CCCCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhcC-----cccCCCCCCCCCC
Confidence 876 88899999999999999999999999999999999996544433322221 2223211 2345789999999
Q ss_pred CccccceEEEEEeCChhhHHhcCCe--eEEEEEe-EEe-------c-----cCCCCC-----------------CCCCHH
Q psy5222 235 GFIYGQASAALLIEGNKNIKILNKS--YLARLLG-GVI-------N-----LHATAS-----------------PEPNLN 282 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~A~~~g~~--i~a~i~g-~~~-------~-----~~~~~~-----------------~~~~~~ 282 (415)
|+++||||+|+||++.+.. .|.. +.....+ .+. . .++... ...+..
T Consensus 187 ~~~fGDGA~A~vl~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (378)
T PRK06816 187 RWMLSDGAGAVLLENKPRP--DGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVR 264 (378)
T ss_pred CEeeecccEEEEEEecCCC--CCceEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHH
Confidence 9999999999999875432 1221 1000000 000 0 000000 000111
Q ss_pred --------HHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHH-----hcCCCceeeeecccccchhHhh
Q psy5222 283 --------NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVY-----KNHFSKLLLNSTKSLTGHCLYS 349 (415)
Q Consensus 283 --------~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~-----~~~~~~~~v~~~k~~~Gh~~~a 349 (415)
...+.++++|+++|++++|||++..|-..... .+++.+.+ +-..++++ ..-..+||+.+|
T Consensus 265 ~~~~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~~~-----~~~v~~~l~~~~~gl~~~k~~--~~~~~~GNt~sA 337 (378)
T PRK06816 265 LLNENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSSEYF-----REKIVELLAKAGFMIPEEKWF--TNLATVGNTGSA 337 (378)
T ss_pred HHHHHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcccHHH-----HHHHHHHHHhccCCCChhheE--Eeccccccccch
Confidence 12677888999999999999999999544432 23333333 21111222 334578999999
Q ss_pred HHHHHHHHH
Q psy5222 350 SGIVEIIAS 358 (415)
Q Consensus 350 sg~~~l~~~ 358 (415)
|-.+.+..+
T Consensus 338 sipi~L~~a 346 (378)
T PRK06816 338 SIYIMLDEL 346 (378)
T ss_pred HHHHHHHHH
Confidence 877777544
|
|
| >KOG1389|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.2e-18 Score=149.61 Aligned_cols=245 Identities=15% Similarity=0.076 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCC-
Q psy5222 79 QTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNI- 157 (415)
Q Consensus 79 ~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl- 157 (415)
.|...+.+..+++-+++|.. +..--+|.+++...+.. -+...+.+-|+
T Consensus 63 eLl~~vl~a~ie~t~~dp~~--igdi~vG~vL~pg~ga~-----------------------------e~R~a~~~ag~P 111 (435)
T KOG1389|consen 63 ELLAAVLRAVIEKTNLDPSL--IGDIVVGTVLAPGSGAS-----------------------------ECRMAAFYAGFP 111 (435)
T ss_pred HHHHHHHHHHHhhcCCCHHH--hcceeeeeccCCCcchH-----------------------------HHHHHHHHcCCC
Confidence 45555677778999999888 66544455554322211 11222333454
Q ss_pred -CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHH----------H-------HHHcccccCCC--
Q psy5222 158 -RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQ----------A-------FHAIGAMGGKN-- 217 (415)
Q Consensus 158 -~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~----------~-------~~~~~~ls~~~-- 217 (415)
.-|..+|+..|+|||+|+..-+..|+.|.+|.-|.+|+|++.+.+... . +--+|..+++-
T Consensus 112 ~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~ 191 (435)
T KOG1389|consen 112 ETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAE 191 (435)
T ss_pred cccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHH
Confidence 559999999999999999999999999999999999999766542110 0 00111111100
Q ss_pred ---------CC-----------------------------CCCC-----------CcccC-------------CCCC---
Q psy5222 218 ---------FY-----------------------------NFPK-----------KTCRP-------------FDKL--- 232 (415)
Q Consensus 218 ---------~~-----------------------------~~~~-----------~~~~p-------------fd~~--- 232 (415)
+. .++. +..|| |.++
T Consensus 192 rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGtt 271 (435)
T KOG1389|consen 192 RFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTT 271 (435)
T ss_pred HhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchhhhcCCcc
Confidence 00 1111 22232 2111
Q ss_pred --CCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCC
Q psy5222 233 --AEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGS 310 (415)
Q Consensus 233 --~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~ 310 (415)
.+..-++||+++++|++...|.+.|.+++++.+.+..-.-... -.+-+..-+|.++|+.+|+..+|||++|++
T Consensus 272 TagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vGv~P~---iMGiGPavAIp~alk~aGL~v~did~FEIN-- 346 (435)
T KOG1389|consen 272 TAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVGVPPA---IMGIGPAVAIPKALKAAGLEVDDIDLFEIN-- 346 (435)
T ss_pred ccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeecCCHH---HcCCCchhhhHHHHHHcCCcccccceeehh--
Confidence 1112369999999999999999999999999998876432211 123445778999999999999999999988
Q ss_pred CCCCCCHHHHHHHHHHHhcC-----CCceeeeecccccchhHhhHHHHHHHHHHHHhhcCcc
Q psy5222 311 SSPLGDKIEISAIKEVYKNH-----FSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFI 367 (415)
Q Consensus 311 gt~~~d~~E~~al~~~~~~~-----~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~i 367 (415)
|+.|-+-++..+ .+++++.+..-.+|||+||+|+..++..+..|++...
T Consensus 347 --------EAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrrgk 400 (435)
T KOG1389|consen 347 --------EAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGK 400 (435)
T ss_pred --------HHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhhcc
Confidence 777777666543 2356777777789999999999999999999987543
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-16 Score=151.25 Aligned_cols=258 Identities=15% Similarity=0.148 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+++|+++++ ++ .+++++.... ......+.+++..+|
T Consensus 61 ~~~la~~Aa~~aL~~ag~~~~~--Id----~li~~s~~~~-------------------------~~~p~~a~~v~~~lg 109 (338)
T PRK09258 61 LSDGAIAAGRKALAEAGIDPSD--IG----LLINTSVCRD-------------------------YLEPATACRVHHNLG 109 (338)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEcCCCC-------------------------CCCChHHHHHHHHcC
Confidence 4689999999999999999888 76 4666643210 011245678999999
Q ss_pred CCC--ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCC
Q psy5222 157 IRG--EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAE 234 (415)
Q Consensus 157 l~G--p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~ 234 (415)
+.. +.+.|..+|+|++.||..|.++|++|.++.+||+++|. .+...-..+..+. . +.....+|+....
T Consensus 110 l~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~-~s~~~~~~~~~~~--~-------~~~~~~~~~~~~~ 179 (338)
T PRK09258 110 LPKSCANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGES-AREIVEATIDRLL--A-------PETTREDFAQSFA 179 (338)
T ss_pred CCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecc-cchhccchhhhhc--c-------Cccchhhhhhccc
Confidence 963 78899999999999999999999999999999999994 3332111111111 1 1112245666667
Q ss_pred CccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC---------CCCC--------HHHHHHHHHHHHHHcCC
Q psy5222 235 GFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS---------PEPN--------LNNEISVMNSVLKQSGL 297 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~---------~~~~--------~~~~~~~~~~aL~~Agl 297 (415)
.+.+||||+|+||++.+.. ..+. .+.+.....++.+. ...+ .....++++++|+++|+
T Consensus 180 ~~~~GDGA~A~ll~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~ 254 (338)
T PRK09258 180 TLTLGSGAAAAVLTRGSLH-PRGH----RLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGW 254 (338)
T ss_pred eEEecccceEEEEecCCCC-CCcc----eeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7889999999999976431 1222 23333222222111 0011 12345688899999999
Q ss_pred CCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCC
Q psy5222 298 KKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPI 377 (415)
Q Consensus 298 ~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~ 377 (415)
+++|||++..|..+.+. ...+.+.++-..++++. .. ..+||+.+|+=.+.+..++ +.+.+
T Consensus 255 ~~~did~~i~H~~~~~~-----~~~~~~~lgl~~~k~~~-~~-~~~GN~~sas~~~~L~~~~---~~g~~---------- 314 (338)
T PRK09258 255 AVEQVDRVICHQVGAAH-----TRAILKALGIDPEKVFT-TF-PTLGNMGPASLPITLAMAA---EEGFL---------- 314 (338)
T ss_pred CHHHCCEEecCCCCHHH-----HHHHHHHhCCCHHHcee-hH-hhhCCcHHhHHHHHHHHHH---HhCCC----------
Confidence 99999999999665543 33455555533223433 23 3689999998666665443 33322
Q ss_pred CCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 378 DNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 378 ~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+.++++..+||.|-+...++++
T Consensus 315 -------------~~Gd~vll~~~G~G~s~~~~~~~ 337 (338)
T PRK09258 315 -------------KPGDRVALLGIGSGLNCSMLEVK 337 (338)
T ss_pred -------------CCCCEEEEEEechhHhhHhHeee
Confidence 12477888899988777766664
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.71 E-value=3e-16 Score=149.35 Aligned_cols=239 Identities=15% Similarity=0.177 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++|+++++ ++ .+++++..... .....+.+++..+
T Consensus 49 ~~~~la~~A~~~al~~ag~~~~~--Id----~li~~~~~~~~-------------------------~~~~~~~~l~~~l 97 (320)
T cd00830 49 TTSDLAVEAAKKALEDAGIDADD--ID----LIIVATSTPDY-------------------------LFPATACLVQARL 97 (320)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEcCCCCC-------------------------CCCcHHHHHHHHh
Confidence 35799999999999999998888 76 56666432100 0123567899999
Q ss_pred CC-CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCC
Q psy5222 156 NI-RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAE 234 (415)
Q Consensus 156 gl-~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~ 234 (415)
|+ +.+.+.+..+|++++.||..|.++|++|.++.+||+++|.+... . .|+....
T Consensus 98 g~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~------------------------~-~~~~~~~ 152 (320)
T cd00830 98 GAKNAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRI------------------------L-DWTDRST 152 (320)
T ss_pred CCCCCcEeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhccc------------------------c-CcccCCc
Confidence 99 45888999999999999999999999999999999999942110 0 1233456
Q ss_pred CccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC-----C---------------------CC-----CHHH
Q psy5222 235 GFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS-----P---------------------EP-----NLNN 283 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~-----~---------------------~~-----~~~~ 283 (415)
++++||||+|+||++.+. +..+ .+....+++... . .. ....
T Consensus 153 ~~~~GDgAaA~ll~~~~~----~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (320)
T cd00830 153 AVLFGDGAGAVVLEATEE----DPGI----LDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRL 224 (320)
T ss_pred eEEEeccceEEEEEecCC----CCcE----EEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHh
Confidence 789999999999998653 1222 222222211100 0 00 0123
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhh
Q psy5222 284 EISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMR 363 (415)
Q Consensus 284 ~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~ 363 (415)
..++++++|+++|++++|||++..|..+... ...+.+.++-..+++. .....+||+.+|+-.+.+..++ +
T Consensus 225 ~~~~i~~~l~~~g~~~~di~~~~~h~~~~~~-----~~~~~~~lgl~~~~~~--~~~~~~Gn~~sas~~~~L~~~~---~ 294 (320)
T cd00830 225 MPESIEEALEKAGLTPDDIDWFVPHQANLRI-----IEAVAKRLGLPEEKVV--VNLDRYGNTSAASIPLALDEAI---E 294 (320)
T ss_pred hHHHHHHHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHhCCCHHHhh--hhHHhhCcHHHHHHHHHHHHHH---H
Confidence 4688999999999999999999999666543 2334444543322232 2345689999998777776553 3
Q ss_pred cCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEE
Q psy5222 364 KKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSII 411 (415)
Q Consensus 364 ~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~v 411 (415)
.+.+ .+.++++..++|.|-+-.+++
T Consensus 295 ~~~~-----------------------~~G~~vll~~~G~G~~~~~~l 319 (320)
T cd00830 295 EGKL-----------------------KKGDLVLLLGFGAGLTWGAAL 319 (320)
T ss_pred cCCC-----------------------CCCCEEEEEEEchHHhhHHhh
Confidence 3322 124677888888876655544
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.8e-15 Score=145.35 Aligned_cols=245 Identities=15% Similarity=0.165 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+.+|+++||+++|+++++ ++ -+++++..+.. .. ..+..++..|
T Consensus 95 ~~~~La~~Aa~~aL~~agi~~~d--Id----~li~~s~~~~~-------------------------~~-~~a~~v~~~L 142 (379)
T PLN02326 95 TLTSLAVEAAKKALEMAGVDPED--VD----LVLLCTSSPDD-------------------------LF-GSAPQVQAAL 142 (379)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeCCCCc-------------------------cC-cHHHHHHHHh
Confidence 46799999999999999998887 66 45555432110 00 1355799999
Q ss_pred CCCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCC
Q psy5222 156 NIRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAE 234 (415)
Q Consensus 156 gl~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~ 234 (415)
|+++ +++.+..+|++++.||..|.++|++|.++.+||+++|.+ +. . .+ |+....
T Consensus 143 G~~~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~-s~----------~-------------~~-~~d~~~ 197 (379)
T PLN02326 143 GCTNALAFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADAL-SR----------Y-------------VD-WTDRGT 197 (379)
T ss_pred CCCCCceeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEechh-cC----------C-------------CC-ccccCc
Confidence 9976 778899999999999999999999999999999999941 10 0 11 122345
Q ss_pred CccccceEEEEEeCChhhHHhcCCeeEE-EEEeEE-------eccCCC----------------------CCCCCC----
Q psy5222 235 GFIYGQASAALLIEGNKNIKILNKSYLA-RLLGGV-------INLHAT----------------------ASPEPN---- 280 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~A~~~g~~i~a-~i~g~~-------~~~~~~----------------------~~~~~~---- 280 (415)
.+++||||+|+||++.+.... .+.. .+...+ ....+. +....+
T Consensus 198 ~~lfGDGAaAvlL~~~~~~~~---~i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 274 (379)
T PLN02326 198 CILFGDGAGAVVLQACDDDED---GLLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEV 274 (379)
T ss_pred eEEEcceeEEEEEEEcCCCCC---ceEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHH
Confidence 578999999999997543211 1111 111000 000000 000001
Q ss_pred ----HHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHH
Q psy5222 281 ----LNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEII 356 (415)
Q Consensus 281 ----~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~ 356 (415)
...+.++++++|+++|++++|||+|..|-.+.. =...+.+.++-..++++. . -..+||+.+|+=.+.|.
T Consensus 275 ~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~-----~~~~~~~~Lgl~~ek~~~-~-l~~~GNt~sAsi~~~L~ 347 (379)
T PLN02326 275 FKFAVRCVPQVIESALQKAGLTAESIDWLLLHQANQR-----IIDAVAQRLGIPPEKVIS-N-LANYGNTSAASIPLALD 347 (379)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH-----HHHHHHHHcCCCHHHeee-c-HhhcCcHHHHHHHHHHH
Confidence 122346788999999999999999999954432 233355555543223432 2 35789999998776665
Q ss_pred HHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 357 ASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 357 ~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.++ +.+.+ .+.++++..+||.|-+-+++|++
T Consensus 348 ~~~---~~g~~-----------------------~~Gd~vll~~~G~G~t~~~~ll~ 378 (379)
T PLN02326 348 EAV---RSGKV-----------------------KKGDVIATAGFGAGLTWGSAIVR 378 (379)
T ss_pred HHH---HcCCC-----------------------CCCCEEEEEEEChhheeeEEEEE
Confidence 442 33322 23578899999999998888875
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.6e-15 Score=142.98 Aligned_cols=242 Identities=16% Similarity=0.121 Sum_probs=159.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..|+++||+++|+++++ ++ .+++++..... . . ..+..++..+|
T Consensus 51 ~~~la~~A~~~aL~~ag~~~~d--Id----~vi~~s~~~~~---------------------~----~-~~~~~v~~~Lg 98 (326)
T CHL00203 51 LTKLAAEAANKALDKAHMDPLE--ID----LIILATSTPDD---------------------L----F-GSASQLQAEIG 98 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeCCCCC---------------------C----C-chHHHHHHHhC
Confidence 4689999999999999999888 76 46666432110 0 0 12347888899
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCC
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEG 235 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G 235 (415)
++. +++.+..+|+|++.||..|.++|++|.++.+||+|+|.+ +. ..+ ++.....
T Consensus 99 ~~~~~~~~v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~-s~-----------------------~~~-~~~~~~~ 153 (326)
T CHL00203 99 ATRAVAFDITAACSGFILALVTATQFIQNGSYKNILVVGADTL-SK-----------------------WID-WSDRKTC 153 (326)
T ss_pred CCCCceeeecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhh-hC-----------------------cCC-cccCCce
Confidence 876 778999999999999999999999999999999999941 10 011 1222356
Q ss_pred ccccceEEEEEeCChhhHHhcCCeeEEE-E--Ee-----EEeccCC-----CCC-CC---------CCH--------HHH
Q psy5222 236 FIYGQASAALLIEGNKNIKILNKSYLAR-L--LG-----GVINLHA-----TAS-PE---------PNL--------NNE 284 (415)
Q Consensus 236 ~~~geGa~alvL~~~~~A~~~g~~i~a~-i--~g-----~~~~~~~-----~~~-~~---------~~~--------~~~ 284 (415)
+++||||+|+||++.+. .+ +... + .| +.....+ ... .. +.+ ..+
T Consensus 154 ~~fgDga~A~ll~~~~~---~~--~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 228 (326)
T CHL00203 154 ILFGDGAGAAIIGASYE---NS--ILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQV 228 (326)
T ss_pred EEEcceeeEEEEEEcCC---CC--eEEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHH
Confidence 78999999999987542 11 1110 0 00 0000000 000 00 011 124
Q ss_pred HHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhc
Q psy5222 285 ISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRK 364 (415)
Q Consensus 285 ~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~ 364 (415)
.++++++|+++|++++|||++..|-.+.. =..++.+.++-..++++ ..-..+||+.+|+=.+.+..+ ++.
T Consensus 229 ~~~i~~~L~~~g~~~~did~~~~hq~~~~-----~~~~~~~~lgl~~~k~~--~~l~~~Gn~~sasi~~~L~~~---~~~ 298 (326)
T CHL00203 229 PAVIIKCLNALNISIDEVDWFILHQANKR-----ILEAIANRLSVPNSKMI--TNLEKYGNTSAASIPLALDEA---IQN 298 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEECCCCHH-----HHHHHHHHhCCCHHHhh--hHHHhhCcHHHHHHHHHHHHH---HHh
Confidence 56789999999999999999999955433 34445555554322332 233577999998766666544 344
Q ss_pred CccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 365 KFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 365 ~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+.+ .+.++++..+||.|=+-.++|++
T Consensus 299 g~~-----------------------~~Gd~vll~~~G~G~s~~~~v~~ 324 (326)
T CHL00203 299 NKI-----------------------QPGQIIVLSGFGAGLTWGAIVLK 324 (326)
T ss_pred CCC-----------------------CCCCEEEEEEEchhhhheEEEEE
Confidence 433 12578889999999888888886
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.5e-14 Score=138.58 Aligned_cols=241 Identities=17% Similarity=0.166 Sum_probs=156.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++|+++++ +| .+++.+.... .......+.+++..+
T Consensus 52 ~~~~la~~Aa~~aL~~ag~~~~d--Id----~li~~~~~~~------------------------~~~~p~~a~~l~~~l 101 (339)
T PRK06840 52 HTSDMAIAAAKPALKQAGVDPAA--ID----VVIYIGSEHK------------------------DYPVWSSAPKIQHEI 101 (339)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEeccCCC------------------------CCCCCchHHHHHHHh
Confidence 35799999999999999999888 76 4554422100 000113357899999
Q ss_pred CCCC-ccccccccchhHHHHHHHHHHHHHc-CCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 156 NIRG-EGFIIGGASASGNIGIIHGMRLIQN-NIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 156 gl~G-p~~~v~~~cas~l~Al~~A~~~I~~-G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
|++. +.+.+..+|++++.||..|.++|++ |.++.+||.+.|.. +. ... |+...
T Consensus 102 Gl~~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~-s~-----------------------~~~-~~~~~ 156 (339)
T PRK06840 102 GAKNAWAFDIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRN-SD-----------------------LVD-YDNPR 156 (339)
T ss_pred CCCCcccccccccchHHHHHHHHHHHHHhcCCCccEEEEEeeccc-cc-----------------------ccC-cCCCC
Confidence 9975 7888999999999999999999999 99999999998831 10 001 11112
Q ss_pred CCc--cccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCC------------CC-C---------------CCCC---
Q psy5222 234 EGF--IYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHA------------TA-S---------------PEPN--- 280 (415)
Q Consensus 234 ~G~--~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~------------~~-~---------------~~~~--- 280 (415)
..+ .+||||+|+||++.+. +..++ +....+++ .. . ..+.
T Consensus 157 ~~~~~~~GDgAaA~ll~~~~~----~~~il----~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (339)
T PRK06840 157 TRFMFNFAAGGSAALLKKDAG----KNRIL----GSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMK 228 (339)
T ss_pred eeeeccCCCceeEEEEEecCC----CCceE----EEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHH
Confidence 232 3799999999987532 11222 21111111 00 0 0010
Q ss_pred -------HHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHH
Q psy5222 281 -------LNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIV 353 (415)
Q Consensus 281 -------~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~ 353 (415)
.....++++++|+++|++++|||++..|-.+.+ =...+.+.++-..++.. ....+||+.+|+-.+
T Consensus 229 ~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~h~~~~~-----~~~~~~~~Lgl~~~~~~---~~~~~Gn~~sas~~~ 300 (339)
T PRK06840 229 ERLDEVSIPNFLKVIREALRKSGYTPKDIDYLAILHMKRS-----AHIALLEGLGLTEEQAI---YLDEYGHLGQLDQIL 300 (339)
T ss_pred HHhHhhHHHHHHHHHHHHHHHcCCCHHHCCEEEECCcCHH-----HHHHHHHHcCCCHHHeE---eHHhccchhhhhHHH
Confidence 113458899999999999999999988743322 22344555543322333 245789999888766
Q ss_pred HHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 354 EIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 354 ~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+..++ +.+.+ .+.++++..+||.|.+-++++++
T Consensus 301 ~L~~~~---~~~~~-----------------------~~Gd~ill~~~G~G~s~~~~~l~ 334 (339)
T PRK06840 301 SLHLAL---EQGKL-----------------------KDGDLVVLVSAGTGYTWAATVIR 334 (339)
T ss_pred HHHHHH---HcCCC-----------------------CCCCEEEEEEEehhhheeEEEEE
Confidence 665432 33222 12578899999999999999987
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.6e-14 Score=136.72 Aligned_cols=238 Identities=16% Similarity=0.170 Sum_probs=156.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+.+|+++||+++|+++++ +| .+++++..+... . ...+..++..+
T Consensus 49 ~~~~la~~Aa~~aL~~agl~~~d--ID----~li~~s~~~~~~------------------------~-p~~a~~v~~~L 97 (345)
T TIGR00748 49 DTATIGVEAARNALKRAKIDPKD--IG----AVYVGSESHPYA------------------------V-KPTATIVAEAI 97 (345)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecCCCcc------------------------c-cchHHHHHHHc
Confidence 35799999999999999999988 77 566664322110 0 12356888999
Q ss_pred CCC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 156 NIR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 156 gl~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
|++ -+.+.+..+|++++.||..|..+|++|.++.+||.+.|.. + .. |. + .
T Consensus 98 Gl~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~-~--------------~~-----~~------~--~ 149 (345)
T TIGR00748 98 GATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTA-Q--------------GA-----PG------D--A 149 (345)
T ss_pred CCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeec-c--------------cC-----CC------c--c
Confidence 985 3788899999999999999999999999999999999942 1 00 10 1 1
Q ss_pred CCccccceEEEEEeCChhhHHhcCCeeEEEEEeEE-eccCCCC---------C---C--CC---CHHHHHHHHHHHHHHc
Q psy5222 234 EGFIYGQASAALLIEGNKNIKILNKSYLARLLGGV-INLHATA---------S---P--EP---NLNNEISVMNSVLKQS 295 (415)
Q Consensus 234 ~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~-~~~~~~~---------~---~--~~---~~~~~~~~~~~aL~~A 295 (415)
.-+.+||||+|+||++.+.. ..+.+.. ...++.. . . .. -.....++++++|+++
T Consensus 150 ~~~~~GDGAaA~vl~~~~~~--------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 221 (345)
T TIGR00748 150 LEYTAGAGGAAYIIGEKNTV--------AYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKL 221 (345)
T ss_pred CcccCCCceEEEEEccCCcc--------eEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHc
Confidence 12557999999999964321 1121111 1111100 0 0 00 1222347888999999
Q ss_pred CCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCC
Q psy5222 296 GLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLES 375 (415)
Q Consensus 296 gl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~ 375 (415)
|++++|||++.+|-.+.+ -...+.+.++-..++++.+-.-..+||+.+||=.+.+..++. .+ +
T Consensus 222 gl~~~did~~i~Hq~~~~-----~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~-----~~-------~ 284 (345)
T TIGR00748 222 GLTPEDFDYAVFHQPNGK-----FYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD-----IA-------E 284 (345)
T ss_pred CCCHHHcCEEEeCCCChH-----HHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH-----hc-------C
Confidence 999999999999944432 233344444433223332212256899999987777765532 11 1
Q ss_pred CCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 376 PIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 376 ~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+.+.++..+||.|-+.++++++
T Consensus 285 ----------------~Gd~vll~~~G~G~s~~~~~~~ 306 (345)
T TIGR00748 285 ----------------PGDRILAVSYGSGAGSDAFSIV 306 (345)
T ss_pred ----------------CCCEEEEEEecCCcceeEEEEE
Confidence 2467889999999988888875
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.9e-14 Score=137.19 Aligned_cols=244 Identities=16% Similarity=0.146 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..|+++||+++|+++++ ++ .+++++...... ....+.+++..+|
T Consensus 48 ~~~l~~~a~~~aL~~ag~~~~~--Id----~li~~~~~~~~~-------------------------~~~~~~~i~~~lg 96 (324)
T cd00827 48 VPTMAVEAARRALERAGIDPDD--IG----LLIVATESPIDK-------------------------GKSAATYLAELLG 96 (324)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEcCCCCCC-------------------------CccHHHHHHHHcC
Confidence 5689999999999999999888 77 577774321100 1245678999999
Q ss_pred CC-CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCC
Q psy5222 157 IR-GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEG 235 (415)
Q Consensus 157 l~-Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G 235 (415)
+. .|.+.++.+|+|++.||..|.++|++|.++.+||+++|.+... +.+....+
T Consensus 97 ~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~--------------------------~~~~~~~~ 150 (324)
T cd00827 97 LTNAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYL--------------------------LDEGSALE 150 (324)
T ss_pred CCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhc--------------------------ccCCCCcc
Confidence 94 5899999999999999999999999999999999999942111 01234578
Q ss_pred ccccceEEEEEeCChhhHHhcCCeeEEEEEeEEe---------ccCCC----------CC-CCC--------CHHHHHHH
Q psy5222 236 FIYGQASAALLIEGNKNIKILNKSYLARLLGGVI---------NLHAT----------AS-PEP--------NLNNEISV 287 (415)
Q Consensus 236 ~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~---------~~~~~----------~~-~~~--------~~~~~~~~ 287 (415)
+++||||+|+||++.+... +..+......... ..... .. ... ....+.++
T Consensus 151 ~~~gdgaaA~ll~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (324)
T cd00827 151 PTLGDGAAAMLVSRNPGIL--AAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKV 228 (324)
T ss_pred ccccCceEEEEEecCcccc--cCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHH
Confidence 8999999999999875420 1111111111000 00000 00 000 13445788
Q ss_pred HHHHHHHcCCCCCcccEEEecCCCC-CCCCHHHHHHHHHHHhcCCCceeee--ecccccchhHhhHHHHHHHHHHHHhhc
Q psy5222 288 MNSVLKQSGLKKNMIDYLNTHGSSS-PLGDKIEISAIKEVYKNHFSKLLLN--STKSLTGHCLYSSGIVEIIASVIQMRK 364 (415)
Q Consensus 288 ~~~aL~~Agl~~~dId~v~~h~~gt-~~~d~~E~~al~~~~~~~~~~~~v~--~~k~~~Gh~~~asg~~~l~~~~~~l~~ 364 (415)
++++|++++++ +||+++..|-.+. .. ...+.+.++-..+++... .....+||+.+|+-.+.+..+ +++
T Consensus 229 ~~~~l~~~~~~-~~i~~~~~h~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~---~~~ 299 (324)
T cd00827 229 VRKALDRAGLS-EDIDYFVPHQPNGKKI-----LEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASL---LES 299 (324)
T ss_pred HHHHHHHcccc-cccceeeccCchHHHH-----HHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHH---Hhc
Confidence 89999999999 9999999995544 22 222222222111122222 245667999998866666544 333
Q ss_pred CccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEE
Q psy5222 365 KFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSII 411 (415)
Q Consensus 365 ~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~v 411 (415)
+.+ .+.+.++..++|.|-.-.+++
T Consensus 300 ~~~-----------------------~~Gd~vl~~~~G~G~~~~~~~ 323 (324)
T cd00827 300 GKL-----------------------KAGDRVLLFSYGSGFTAEAFV 323 (324)
T ss_pred CCC-----------------------CCCCEEEEEEeccchhheecc
Confidence 322 135788888999888776665
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.4e-14 Score=135.42 Aligned_cols=245 Identities=11% Similarity=0.104 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++|+++++ ++ -+++++.... ......+.+++..|
T Consensus 51 ~~~~la~~Aa~~aL~~ag~~~~~--Id----~li~~t~~~d-------------------------~~~p~~a~~v~~~L 99 (326)
T PRK05963 51 TLSDLAASAGDMALSDAGIERSD--IA----LTLLATSTPD-------------------------HLLPPSAPLLAHRL 99 (326)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEECCCCC-------------------------CCCCcHHHHHHHHh
Confidence 35689999999999999999888 76 4666643311 01124567899999
Q ss_pred CCCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCC
Q psy5222 156 NIRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAE 234 (415)
Q Consensus 156 gl~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~ 234 (415)
|++. +++.+..+|++++.||..|..+|++|. +.+||.++|.. + ..+ .| +....
T Consensus 100 g~~~~~~~di~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~-s----------~~~-------------~~-~~~~~ 153 (326)
T PRK05963 100 GLQNSGAIDLAGACAGFLYALVLADGFVRAQG-KPVLVVAANIL-S----------RRI-------------NM-AERAS 153 (326)
T ss_pred CCCCCceeeccchhhHHHHHHHHHHHHHHcCC-CeEEEEEechh-h----------ccC-------------Cc-cccCc
Confidence 9965 888899999999999999999999985 89999999941 1 011 11 11235
Q ss_pred CccccceEEEEEeCChhhHHhcCCeeEE-EEEeEEe-------ccCCC-----------C--C-CCC-------CHHHHH
Q psy5222 235 GFIYGQASAALLIEGNKNIKILNKSYLA-RLLGGVI-------NLHAT-----------A--S-PEP-------NLNNEI 285 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~A~~~g~~i~a-~i~g~~~-------~~~~~-----------~--~-~~~-------~~~~~~ 285 (415)
.+++||||+|+||++.+... ..+.. .+...+. ...+. . . ... ....+.
T Consensus 154 ~~lfGDgA~A~ll~~~~~~~---~~~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (326)
T PRK05963 154 AVLFADAAGAVVLAPSAKAN---SGVLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMS 230 (326)
T ss_pred eEEEeecceEEEEEecCCCC---CceEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHH
Confidence 68899999999998654211 11111 1110000 00000 0 0 000 022345
Q ss_pred HHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcC
Q psy5222 286 SVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKK 365 (415)
Q Consensus 286 ~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~ 365 (415)
++++++|+++|++++|||++..|-.+. .-...+.+.++-..+++. ..-..+||+.+|+=.+.+-. .++.+
T Consensus 231 ~~~~~~L~~~gl~~~did~~~~h~~~~-----~~~~~~~~~l~l~~~k~~--~~l~~~Gn~~sas~~~~L~~---~~~~~ 300 (326)
T PRK05963 231 GASQNVLASAAMTPQDIDRFFPHQANA-----RIVDKVCETIGIPRAKAA--STLETYGNSSAATIPLSLSL---ANLEQ 300 (326)
T ss_pred HHHHHHHHHcCCCHHHCCEEEeCCCCH-----HHHHHHHHHcCCCHHHhh--hhHHhhCcHHHHHHHHHHHH---HHHhC
Confidence 788899999999999999999994443 223334444442221222 22356799977765554432 22222
Q ss_pred ccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 366 FIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 366 ~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+ .+.++++..++|.|-+-+++|++
T Consensus 301 ~~-----------------------~~Gd~vll~~~G~G~~~~~~ll~ 325 (326)
T PRK05963 301 PL-----------------------REGERLLFAAAGAGMTGGAVVMR 325 (326)
T ss_pred CC-----------------------CCCCEEEEEEEehhhhheeeEEe
Confidence 21 12578999999999998888886
|
|
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.8e-14 Score=135.32 Aligned_cols=238 Identities=15% Similarity=0.158 Sum_probs=155.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++|+++++ +| .+++++..... .. ...+.+++..+
T Consensus 50 ~~~~la~~Aa~~aL~~ag~~~~d--Id----~li~~s~~~~~------------------------~~-p~~a~~v~~~L 98 (347)
T PRK04262 50 DTATIAVEAARNALKRAGIDPKE--IG----AVYVGSESHPY------------------------AV-KPTATIVAEAL 98 (347)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecCCCc------------------------cc-ccHHHHHHHHc
Confidence 35699999999999999999888 77 56666432111 00 12345888999
Q ss_pred CCCC--ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 156 NIRG--EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 156 gl~G--p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
|++. +.+.+..+|++++.+|..|..+|++|.++.+||.+.|... .. +.. .
T Consensus 99 gl~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~-------------~~-------~~~--------~ 150 (347)
T PRK04262 99 GATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQ-------------GA-------PGD--------A 150 (347)
T ss_pred CCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeec-------------cC-------CCC--------C
Confidence 9964 6688999999999999999999999999999999999410 00 100 1
Q ss_pred CCccccceEEEEEeCChhhHHhcCCeeEEEEEeEE-eccCCCCC--------------CC--C-CHHHHHHHHHHHHHHc
Q psy5222 234 EGFIYGQASAALLIEGNKNIKILNKSYLARLLGGV-INLHATAS--------------PE--P-NLNNEISVMNSVLKQS 295 (415)
Q Consensus 234 ~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~-~~~~~~~~--------------~~--~-~~~~~~~~~~~aL~~A 295 (415)
.-+.+||||+|+||++.+. . .+|.+.. ...+.... .. + ......++++++|+++
T Consensus 151 ~~~~~GDGA~A~ll~~~~~----~----~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~ 222 (347)
T PRK04262 151 LEYTAAAGGAAFIIGKEEV----I----AEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKL 222 (347)
T ss_pred CCCcCCCCcEEEEEecCcc----c----ceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHh
Confidence 1134699999999986431 1 2233221 11111000 00 0 1245678899999999
Q ss_pred CCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCC
Q psy5222 296 GLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLES 375 (415)
Q Consensus 296 gl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~ 375 (415)
|++++|||++..|-.+... ...+.+.++-..+++..+-.-..+||+.+|+=.+.+..++ ++ + +
T Consensus 223 gl~~~dId~~v~Hq~n~~~-----~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~---~~--~-------~ 285 (347)
T PRK04262 223 GLKPSDYDYAVFHQPNGKF-----PLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVL---DV--A-------K 285 (347)
T ss_pred CcCHHHhceeecCCCchHH-----HHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHH---Hh--C-------C
Confidence 9999999999999444432 2233344443322333222346789999998777775543 11 1 1
Q ss_pred CCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 376 PIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 376 ~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+.+.++..+||.|-+...++++
T Consensus 286 ----------------~Gd~vll~~~G~G~~~~~~~~~ 307 (347)
T PRK04262 286 ----------------PGDRILVVSFGSGAGSDAFSIT 307 (347)
T ss_pred ----------------CCCEEEEEecCCCcceeeEEEE
Confidence 1467888899988888777765
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.4e-15 Score=143.11 Aligned_cols=57 Identities=16% Similarity=0.066 Sum_probs=51.3
Q ss_pred hHHHHHHHHhCCCC--ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHH
Q psy5222 146 NQIGIMSEIFNIRG--EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPM 202 (415)
Q Consensus 146 ~~a~~ia~~lgl~G--p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~ 202 (415)
.++..++...|+.. |.++|+.+|+||+.|+..|++.|++|.+|++|++|+|.+...+
T Consensus 68 ~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~ 126 (392)
T COG0183 68 NIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAP 126 (392)
T ss_pred cHHHHHHHHcCCCCCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCC
Confidence 56678899999975 9999999999999999999999999999999999999765544
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-13 Score=131.41 Aligned_cols=245 Identities=18% Similarity=0.142 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++|+++++ ++ -+++++..+. ......+.+++..|
T Consensus 59 ~~~~la~~Aa~~aL~~a~~~~~d--Id----~lI~~t~t~d-------------------------~~~P~~a~~v~~~L 107 (353)
T PRK12880 59 CVSDLGKHAANTLLQGLNIDKNS--LD----ALIVVTQSPD-------------------------FFMPSTACYLHQLL 107 (353)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEcCCCC-------------------------CCCCcHHHHHHHHh
Confidence 36799999999999999999888 76 4666644321 11236688999999
Q ss_pred CCCC--ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 156 NIRG--EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 156 gl~G--p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
|++. +++-+..+|++++.+|..|..+|++|..+ +||.++|.. +. ...| +...
T Consensus 108 g~~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~---------------S~---------~~~~-~d~~ 161 (353)
T PRK12880 108 NLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTL---------------SK---------FIHP-KNMN 161 (353)
T ss_pred CCCCCceEEehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhh---------------hc---------cCCc-ccCC
Confidence 9963 67889999999999999999999999999 888888831 10 0111 1122
Q ss_pred CCccccceEEEEEeCChhhHHh------cCCee-EEEEEeEEeccC-------CCC----------CCCCC--------H
Q psy5222 234 EGFIYGQASAALLIEGNKNIKI------LNKSY-LARLLGGVINLH-------ATA----------SPEPN--------L 281 (415)
Q Consensus 234 ~G~~~geGa~alvL~~~~~A~~------~g~~i-~a~i~g~~~~~~-------~~~----------~~~~~--------~ 281 (415)
...++||||+|+||++.+.... ++... ...+.+.+.... ... ....+ .
T Consensus 162 ~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~ 241 (353)
T PRK12880 162 LAPIFGDGVSATLIEKTDFNEAFFELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMAL 241 (353)
T ss_pred ceeeecccceEEEEEecCCCCceEEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHH
Confidence 3568999999999986432110 00000 001111100000 000 00011 1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHH
Q psy5222 282 NNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQ 361 (415)
Q Consensus 282 ~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~ 361 (415)
..+..+++++|+++|++++|||++..| +....-...+.+.++-..++++. ..-..+|++.+||-.+.+-..+
T Consensus 242 ~~~~~~i~~~L~~~gl~~~did~~v~H-----Q~~~~i~~~i~~~Lgl~~ek~~~-~~l~~~GNtssasip~~L~~~~-- 313 (353)
T PRK12880 242 ECEPKSFKEILEFSKVDEKDIAFHLFH-----QSNAYLVDCIKEELKLNDDKVPN-FIMEKYANLSACSLPALLCELD-- 313 (353)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEC-----CCCHHHHHHHHHHhCCCHHHhhh-hhHHhhCCHHHHHHHHHHHHHH--
Confidence 223578899999999999999999999 45545566666666643323321 1224568888776444443321
Q ss_pred hhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 362 MRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 362 l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+.+. .+ ++..+||-|=+-++++++
T Consensus 314 -~~~~--------------------------~~-~ll~~~G~G~s~g~~ll~ 337 (353)
T PRK12880 314 -TPKE--------------------------FK-ASLSAFGAGLSWGSAVLN 337 (353)
T ss_pred -HcCC--------------------------cE-EEEEEEchhhhheEeEEE
Confidence 1110 11 678888888888888876
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.9e-13 Score=120.31 Aligned_cols=233 Identities=12% Similarity=0.071 Sum_probs=150.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||++||+++++ +| .+++|... + + ...+..++..||
T Consensus 50 e~eLa~eAa~~ALekAGL~~~D--ID----~IIvGdl~---~-Q------------------------~~~As~vA~~LG 95 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDD--VD----FFLAGDLL---N-Q------------------------IITANFVARDLG 95 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEeCCC---C-c------------------------ccHHHHHHHHhC
Confidence 4589999999999999999988 77 46655311 0 0 134678889999
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCC--CCCCC
Q psy5222 157 IRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPF--DKLAE 234 (415)
Q Consensus 157 l~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pf--d~~~~ 234 (415)
+ |.+.|.++|+|++.||..|..+|++|.+|.|||++.+...+.+....+ ...| .+...
T Consensus 96 I--P~fdV~~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqfr~------------------p~eyg~q~~~t 155 (327)
T TIGR02845 96 I--PFLGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQFRY------------------PTEYGVQKPPT 155 (327)
T ss_pred C--CEEEEeccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhccc------------------ccccccCCCCe
Confidence 7 889999999999999999999999999999999999953333221111 0112 22345
Q ss_pred CccccceEEEEEeCChhh-HHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCC
Q psy5222 235 GFIYGQASAALLIEGNKN-IKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSP 313 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~-A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~ 313 (415)
...+++||+|+||++.+. .+-.+.+ .++|..++.. |+..+..-..++....+.+-|++-|.+|+|-|.|..-+-|..
T Consensus 156 a~~tgdGAGA~vl~~~~~~~~i~~~t-~gkv~d~g~~-d~~nmgaamapaa~dti~~h~~d~~~~~~~yd~i~tgdlg~v 233 (327)
T TIGR02845 156 AQWTVTGAGAVLLASTGGGPRITSAT-IGKVVDYGIT-DPLDMGAAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDLARV 233 (327)
T ss_pred eeEEEcccEEEEEeecCCCCceEEEE-EEEEEecCCC-CcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEecchHHH
Confidence 678999999999987532 1111122 2455555542 333332222445567788889999999999999998766652
Q ss_pred CCCHHHHHHHHHHHhcCCC---------ceeeeeccccc---chhHhhHHHHHHHHHHHHhhcCccCCC
Q psy5222 314 LGDKIEISAIKEVYKNHFS---------KLLLNSTKSLT---GHCLYSSGIVEIIASVIQMRKKFIHPN 370 (415)
Q Consensus 314 ~~d~~E~~al~~~~~~~~~---------~~~v~~~k~~~---Gh~~~asg~~~l~~~~~~l~~~~ip~~ 370 (415)
-..-+.+++.+++- .+.+.-....+ |-.-|+|..+-.-..+-.|++|.+-..
T Consensus 234 -----g~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~~~~~~~~~~~g~~~r~ 297 (327)
T TIGR02845 234 -----GSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVTYGHILKEMLRGKLKKV 297 (327)
T ss_pred -----HHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHHHHHHHHHHhcCcceEE
Confidence 33444455543321 11222111111 334455666666667777887775433
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=99.51 E-value=4e-13 Score=129.81 Aligned_cols=251 Identities=16% Similarity=0.097 Sum_probs=160.8
Q ss_pred CCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHH
Q psy5222 74 SPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSE 153 (415)
Q Consensus 74 ~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 153 (415)
......|+.+|+++||+++|+++++ ++ .+++++..+ . ....++.+|..
T Consensus 82 ~~~~~~la~~Aa~~aL~~a~~~~~~--Id----~li~~s~~~-~-------------------------~~P~~a~~i~~ 129 (361)
T cd00831 82 LEEARELAEEAARGALDEAGLRPSD--ID----HLVVNTSTG-N-------------------------PTPSLDAMLIN 129 (361)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHH--CC----EEEEECCCC-C-------------------------CCCCHHHHHHH
Confidence 3446789999999999999999888 76 466654321 0 11245679999
Q ss_pred HhCCCC--cccccc-ccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCC
Q psy5222 154 IFNIRG--EGFIIG-GASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFD 230 (415)
Q Consensus 154 ~lgl~G--p~~~v~-~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd 230 (415)
.+|++. +.+.+. .+|++++.||..|..+|++|..+.+||.++|.... . .++-|
T Consensus 130 ~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~-~-----------------------~~~~d 185 (361)
T cd00831 130 RLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSL-W-----------------------YRGPD 185 (361)
T ss_pred HhCCCcccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeecccc-e-----------------------eCCCC
Confidence 999973 678898 89999999999999999999999999999994211 0 01111
Q ss_pred -CC--CCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEec--------------cCCCCC-CCC-----CHHHHHHH
Q psy5222 231 -KL--AEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVIN--------------LHATAS-PEP-----NLNNEISV 287 (415)
Q Consensus 231 -~~--~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~--------------~~~~~~-~~~-----~~~~~~~~ 287 (415)
.+ -..+++||||+|+||++.+.... .......+.+.... ..+... ..+ ....+.++
T Consensus 186 ~~~~~~~~~lfGDgaaA~ll~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 264 (361)
T cd00831 186 HRSMLVGNALFGDGAAAVLLSNDPRDRR-RERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERV 264 (361)
T ss_pred cHHHhhhhhhccCCceEEEEEcCCCccc-ccccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHH
Confidence 00 13578999999999998654311 00111122222110 001010 111 12345678
Q ss_pred HHHHHHHc--CCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceee-eecccccchhHhhHHHHHHHHHHHHhhc
Q psy5222 288 MNSVLKQS--GLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLL-NSTKSLTGHCLYSSGIVEIIASVIQMRK 364 (415)
Q Consensus 288 ~~~aL~~A--gl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v-~~~k~~~Gh~~~asg~~~l~~~~~~l~~ 364 (415)
++++|+++ |++++|||++..|-.+.+. ..++.+.++-..+++.. ...-..+||+.+||=.+.+..+ +++
T Consensus 265 i~~~L~~~~~g~~~~did~~~~H~~~~~i-----~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~---~~~ 336 (361)
T cd00831 265 LRKLLARLGIGLFKLAFDHWCVHPGGRAV-----LDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYM---EAK 336 (361)
T ss_pred HHHHhccccCCCccccceEEEECCCChHH-----HHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHH---HHh
Confidence 99999999 9999999999999555432 33444545432222221 1233467999998866666544 333
Q ss_pred CccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEE
Q psy5222 365 KFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIIL 412 (415)
Q Consensus 365 ~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl 412 (415)
+.+ .+.+.++..+||.|=+..++|+
T Consensus 337 g~~-----------------------~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 337 GRV-----------------------KRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred CCC-----------------------CCCCEEEEEEEcCCceeeeeeC
Confidence 322 1247788889998887777664
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2e-12 Score=125.04 Aligned_cols=270 Identities=12% Similarity=0.065 Sum_probs=165.3
Q ss_pred CCHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccc
Q psy5222 66 FILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDS 145 (415)
Q Consensus 66 ~~~~~~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (415)
+..+......-..+|+.+|+++||+++|+++++ ++ -+++.+..+.. + .
T Consensus 91 ~~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~d--Id----~ii~~t~t~~~-------------------------~-P 138 (393)
T PLN03172 91 LDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSK--IT----HLVFCTTSGVD-------------------------M-P 138 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEccCCCc-------------------------C-c
Confidence 344555555556799999999999999998888 76 45555433210 1 2
Q ss_pred hHHHHHHHHhCCCCc---cccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCC
Q psy5222 146 NQIGIMSEIFNIRGE---GFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFP 222 (415)
Q Consensus 146 ~~a~~ia~~lgl~Gp---~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~ 222 (415)
.++.+++..||++.- .+.+..+|++++.+|..|.++++++..+.|||+++|.+..... . +
T Consensus 139 ~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~----------~-------~ 201 (393)
T PLN03172 139 GADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTFR----------G-------P 201 (393)
T ss_pred hHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhhhc----------c-------c
Confidence 467899999999763 2457899999999999999999999999999999994221000 0 0
Q ss_pred CCcccCCCCCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEe----cc----------CCCCC-CCC-----CHH
Q psy5222 223 KKTCRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVI----NL----------HATAS-PEP-----NLN 282 (415)
Q Consensus 223 ~~~~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~----~~----------~~~~~-~~~-----~~~ 282 (415)
.. +-.+.--...+|||||+|+||+..+... ..++.-+|.+... .+ .|... ..+ -..
T Consensus 202 ~d--~~~~~~v~~~LFGDGAaAvVl~~~~~~~--~~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~ 277 (393)
T PLN03172 202 SD--THLDSLVGQALFGDGAAAVIIGADPDTK--IERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISK 277 (393)
T ss_pred cc--ccHHhhhccchhcCceEEEEEecCCCCc--ccCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHH
Confidence 00 0000001357799999999998754221 0112223443321 11 11111 011 134
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHHHHHHHHHHHH
Q psy5222 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSGIVEIIASVIQ 361 (415)
Q Consensus 283 ~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg~~~l~~~~~~ 361 (415)
.+...+++.|++.|++..||+++..|--+ ..=..++.+.++-..+++..+ ..-..+|++.+||=.+-+-.....
T Consensus 278 ~i~~~~~~~L~~~gl~~~di~~~~~Hqgg-----~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~ 352 (393)
T PLN03172 278 NIEKSLVEAFAPIGINDWNSIFWIAHPGG-----PAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKK 352 (393)
T ss_pred HHHHHHHHHhhhcCCCccccceEEecCCc-----HHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhh
Confidence 45678888999999999999999999444 344555656555332222211 223456888777644443322210
Q ss_pred -hhcCccCCCCCCCCCCCCCCCcccCcccccC-CCEEEEeccCcCCceeEEEEee
Q psy5222 362 -MRKKFIHPNLNLESPIDNQANFSGKKSISIN-INNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 362 -l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
++.+.+ .+.+ .++++..+||-|=+..+++|+.
T Consensus 353 ~~~~g~~---------------------~~G~~~~~~ll~afGpG~t~~~~ll~~ 386 (393)
T PLN03172 353 SIEEGKG---------------------STGEGLEWGVLFGFGPGLTVETVVLHS 386 (393)
T ss_pred hhhcCCC---------------------CCCCCcceEEEEEeCCcceeeeeeeEe
Confidence 111111 0111 2678999999999999888874
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.4e-12 Score=126.71 Aligned_cols=271 Identities=11% Similarity=0.066 Sum_probs=163.9
Q ss_pred CCHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccc
Q psy5222 66 FILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDS 145 (415)
Q Consensus 66 ~~~~~~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (415)
+..+......-..+|+..|+++||+++|+++++ ++ -+++.+..+.. ..
T Consensus 95 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~d--Id----~lI~~T~Tg~~--------------------------~P 142 (401)
T PLN03170 95 LDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSK--IT----HLVFCTTSGVD--------------------------MP 142 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEccCCCC--------------------------CC
Confidence 344444455556689999999999999998888 76 45555432210 12
Q ss_pred hHHHHHHHHhCCCCc---cccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCC
Q psy5222 146 NQIGIMSEIFNIRGE---GFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFP 222 (415)
Q Consensus 146 ~~a~~ia~~lgl~Gp---~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~ 222 (415)
.++.+++..||++.- .+.+..+|++++.+|..|.++++++....|||.++|.+.... . . +
T Consensus 143 s~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~~-----~-----~-------~ 205 (401)
T PLN03170 143 GADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTF-----R-----G-------P 205 (401)
T ss_pred hHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhcc-----C-----C-------c
Confidence 567899999999764 578999999999999999999999999999999999422100 0 0 0
Q ss_pred CCcccCCCCCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEe--------------ccCCCCC-CCC-----CHH
Q psy5222 223 KKTCRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVI--------------NLHATAS-PEP-----NLN 282 (415)
Q Consensus 223 ~~~~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~--------------~~~~~~~-~~~-----~~~ 282 (415)
.. .+ .+......++||||+|+||+..+... ...+..++..... ...+... ... -..
T Consensus 206 ~~-~~-~~~~~~~~LFGDGAaAvVl~~~~~~~--~~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~ 281 (401)
T PLN03170 206 SE-SH-LDSMVGQALFGDGAAAVIVGADPDER--VERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISK 281 (401)
T ss_pred cc-ch-hhhhhhhhhhhceeEEEEEecCCccc--ccCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHH
Confidence 00 00 11112346899999999998743210 0111122322211 1111110 001 134
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceee-eecccccchhHhhHHHHHHHHHHHH
Q psy5222 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLL-NSTKSLTGHCLYSSGIVEIIASVIQ 361 (415)
Q Consensus 283 ~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v-~~~k~~~Gh~~~asg~~~l~~~~~~ 361 (415)
.+...++++|+++|++.+||+++.+|--+. .=..++.+.++-..+++.. ...-..+||+.+++=.+.|-.....
T Consensus 282 ~i~~~v~~~L~~~gl~~~di~~~v~Hqgg~-----~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~ 356 (401)
T PLN03170 282 NIERSLEEAFKPLGITDYNSIFWVAHPGGP-----AILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKR 356 (401)
T ss_pred HHHHHHHHHHHhcCCCccccCeEEecCCcH-----HHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHh
Confidence 456788999999999999999999994333 3344555555432222211 1233456888888755555443321
Q ss_pred -hhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 362 -MRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 362 -l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
++++.+.+- ...++++..+||-|=+..++||++
T Consensus 357 ~~~~g~~~~G--------------------~~~~~~ll~afGpG~t~~~~ll~~ 390 (401)
T PLN03170 357 SAEDGQATTG--------------------EGFDWGVLFGFGPGLTVETVVLHS 390 (401)
T ss_pred HhhcCCCCCC--------------------CCccEEEEEEeCchHhHHhHHhee
Confidence 122322110 002567888888877776666654
|
|
| >KOG1392|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.5e-13 Score=119.47 Aligned_cols=277 Identities=14% Similarity=0.056 Sum_probs=175.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCC
Q psy5222 78 IQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNI 157 (415)
Q Consensus 78 ~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 157 (415)
+.|+.++....++.-.++.+. +|. +|+|+.-... -.+.++...+..-|+
T Consensus 67 hdlar~al~~ll~kt~lpke~--~dy----ii~gtviqev-------------------------ktsniareaal~agf 115 (465)
T KOG1392|consen 67 HDLAREALKALLEKTKLPKEQ--LDY----IICGTVIQEV-------------------------KTSNIAREAALLAGF 115 (465)
T ss_pred hHHHHHHHHHHHHhccCCHHH--hce----eeehhhHHHH-------------------------hcchHHHHHHHhcCC
Confidence 467777778888888877666 663 4444221100 013445555555565
Q ss_pred --CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHH------------------------cc
Q psy5222 158 --RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHA------------------------IG 211 (415)
Q Consensus 158 --~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~------------------------~~ 211 (415)
+-|..||..+|-|+-+|+..++-+|.+|.+|++++||+|.+.+.+....-.. ..
T Consensus 116 sdktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~n 195 (465)
T KOG1392|consen 116 SDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKN 195 (465)
T ss_pred CCCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhh
Confidence 5699999999999999999999999999999999999995544332211000 00
Q ss_pred cccCCC----------CC------------------------------------------------CC----CC------
Q psy5222 212 AMGGKN----------FY------------------------------------------------NF----PK------ 223 (415)
Q Consensus 212 ~ls~~~----------~~------------------------------------------------~~----~~------ 223 (415)
.++... .+ .+ .+
T Consensus 196 flapelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftdvvpfkv~gkd~~t~kdngirvs 275 (465)
T KOG1392|consen 196 FLAPELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTDVVPFKVDGKDPKTIKDNGIRVS 275 (465)
T ss_pred ccCcCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccceeeEecCCCCcceecCCCcccC
Confidence 000000 00 00 00
Q ss_pred ----------CcccCCCC--CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEe-ccCCCCCCCCCHHHHHHHHHH
Q psy5222 224 ----------KTCRPFDK--LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVI-NLHATASPEPNLNNEISVMNS 290 (415)
Q Consensus 224 ----------~~~~pfd~--~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~-~~~~~~~~~~~~~~~~~~~~~ 290 (415)
....||.. .++...+.|||.+.+++.++.|.+.|-+|-+.++.+-. +.|+... -.-+...++.+
T Consensus 276 sle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdq---lllgpay~ipk 352 (465)
T KOG1392|consen 276 SLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQ---LLLGPAYVIPK 352 (465)
T ss_pred CHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhh---eecccccccHH
Confidence 01112211 12333468999999999999999999999999988754 3343322 11223567889
Q ss_pred HHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHH-HHHhc-----CC-------CceeeeecccccchhHhhHHHHHHHH
Q psy5222 291 VLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIK-EVYKN-----HF-------SKLLLNSTKSLTGHCLYSSGIVEIIA 357 (415)
Q Consensus 291 aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~-~~~~~-----~~-------~~~~v~~~k~~~Gh~~~asg~~~l~~ 357 (415)
.|++||++..|||.+|+|....-+- .....|+. ..|.+ .. +.++..+..-.+|||+||+|..-...
T Consensus 353 ll~kagltlkdid~feiheafagqi-lanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvrl~mh 431 (465)
T KOG1392|consen 353 LLDKAGLTLKDIDVFEIHEAFAGQI-LANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVRLAMH 431 (465)
T ss_pred HHHHcCCcccccchhhhHHHHhHHH-HhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchhhHHH
Confidence 9999999999999999994322100 00111221 12221 11 12334455566899999999887776
Q ss_pred HHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 358 SVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 358 ~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+..-|++ -+.++.+|-+..-||+...+++|.|
T Consensus 432 ~anrl~~--------------------------e~gqygvvaacaaggqgvamlieay 463 (465)
T KOG1392|consen 432 SANRLKE--------------------------EKGQYGVVAACAAGGQGVAMLIEAY 463 (465)
T ss_pred HHhHHHh--------------------------hcCceeEeehhhcCCcceEEEeecc
Confidence 6655543 1257888989999999999999987
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.8e-12 Score=124.63 Aligned_cols=260 Identities=13% Similarity=0.066 Sum_probs=154.0
Q ss_pred CHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccch
Q psy5222 67 ILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSN 146 (415)
Q Consensus 67 ~~~~~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (415)
..+..........|+..|+++||+++|+++++ +| -+++++..+.. + ..
T Consensus 98 ~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~d--Id----~li~~t~t~~~-------------------------~-P~ 145 (399)
T PLN03171 98 DARLDIAADAVPELAAEAAKKAIAEWGRPAAD--IT----HLVVTTNSGAH-------------------------I-PG 145 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEcCCCCC-------------------------C-Cc
Confidence 33444444567799999999999999999888 76 46665443210 1 25
Q ss_pred HHHHHHHHhCCCCc---cccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCC
Q psy5222 147 QIGIMSEIFNIRGE---GFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPK 223 (415)
Q Consensus 147 ~a~~ia~~lgl~Gp---~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~ 223 (415)
.+.++...||++.. .+.+..+|++++.+|..|..+|++|..+.|||.++|.+...
T Consensus 146 ~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~~---------------------- 203 (399)
T PLN03171 146 VDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLLL---------------------- 203 (399)
T ss_pred hHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEeccccc----------------------
Confidence 57789999999753 35566799999999999999999999999999999941110
Q ss_pred CcccCCCCC-----CCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCC-------------C--CC-CC-H
Q psy5222 224 KTCRPFDKL-----AEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATA-------------S--PE-PN-L 281 (415)
Q Consensus 224 ~~~~pfd~~-----~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~-------------~--~~-~~-~ 281 (415)
..+-|.+ -.+.++||||+|+||++.+...+++ ...+........+.. . .. .. .
T Consensus 204 --~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~---~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp 278 (399)
T PLN03171 204 --FNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERP---LFEIVSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVP 278 (399)
T ss_pred --cCCCCcccHHhhhccccccCccEEEEEecCCCCCCCC---ceEEEEeeeEEecCCchheEEEEEcCCceEEECchhHH
Confidence 1111111 1267899999999999754321111 123332222111110 0 00 11 1
Q ss_pred HHHHHHHHHHHHH---------cCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHH
Q psy5222 282 NNEISVMNSVLKQ---------SGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSG 351 (415)
Q Consensus 282 ~~~~~~~~~aL~~---------Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg 351 (415)
..+.+.+++++++ +|++++||+++ .| .+...-..++.+.++-..++++.+ ..-..+|++.+||=
T Consensus 279 ~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~-~H-----q~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSi 352 (399)
T PLN03171 279 GLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWA-VH-----PGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATV 352 (399)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCcccceEE-Ec-----CCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhH
Confidence 2233344555554 58889999988 59 333334455555555332233311 12345788888765
Q ss_pred HHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccC-CCEEEEeccCcCCceeEEEEe
Q psy5222 352 IVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISIN-INNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 352 ~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+.|-.++.+.+.+ +. + -+ .++++..+||.|=+-.+++++
T Consensus 353 p~~L~~~~~~~~~~-~~-------~--------------G~~~d~vll~~fG~Glt~~~~ll~ 393 (399)
T PLN03171 353 IFALDELRRQMEEA-AA-------A--------------GAWPELGVMMAFGPGLTVDAMLLH 393 (399)
T ss_pred HHHHHHHHhhHhhc-CC-------C--------------CCCcceEEEEEEcccHHHHHHHhh
Confidence 44444332221110 10 0 01 267788888888766666654
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.2e-12 Score=124.04 Aligned_cols=258 Identities=13% Similarity=0.084 Sum_probs=155.0
Q ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHH
Q psy5222 75 PLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEI 154 (415)
Q Consensus 75 ~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 154 (415)
.....|+.+|+++||+++|+++++ ++ -+++++... . .....+..++..
T Consensus 104 e~~~~La~~Aa~~aL~~ag~~~~d--Id----~lI~~t~t~-~-------------------------~~P~~a~~l~~~ 151 (391)
T PLN03169 104 EAVTQMAVEASLACIKEWGRPVSD--IT----HLVYVSSSE-A-------------------------RLPGGDLYLAKQ 151 (391)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHH--CC----EEEEECcCC-C-------------------------CCCcHHHHHHHH
Confidence 345689999999999999999888 76 455554321 0 112456799999
Q ss_pred hCCCCc---cccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCC
Q psy5222 155 FNIRGE---GFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDK 231 (415)
Q Consensus 155 lgl~Gp---~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~ 231 (415)
||++.. .+.+..+|++++.+|..|..+|++|..+.|||.++|.+ +.. +. . +. ..+ ++.
T Consensus 152 LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~-s~~----~~---~---------~~-~~~-~~d 212 (391)
T PLN03169 152 LGLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETT-ILG----FR---P---------PS-PDR-PYD 212 (391)
T ss_pred hCcCCcceeeecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcC-hhh----cc---C---------CC-ccc-hhh
Confidence 999753 47789999999999999999999999999999999942 110 00 0 00 001 112
Q ss_pred CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEe----cc----------CCCCC------CCCCHHHHHHHHHHH
Q psy5222 232 LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVI----NL----------HATAS------PEPNLNNEISVMNSV 291 (415)
Q Consensus 232 ~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~----~~----------~~~~~------~~~~~~~~~~~~~~a 291 (415)
.....++||||+|+||+..+.... ...++ .+...+. .. .+... +......+.++++++
T Consensus 213 ~~~~~lFGDGAaA~vl~~~~~~~~-~~~~~-~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~ 290 (391)
T PLN03169 213 LVGAALFGDGAAAVIIGADPIPVS-ESPFF-ELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKL 290 (391)
T ss_pred hhhhhhccCceEEEEEecCCCccc-CCcce-EEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHH
Confidence 234568999999999997543210 01111 1211111 00 01000 001134456788999
Q ss_pred HHHcCCCCCccc--EEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHHHHHHHHHHHHhhcCccC
Q psy5222 292 LKQSGLKKNMID--YLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSGIVEIIASVIQMRKKFIH 368 (415)
Q Consensus 292 L~~Agl~~~dId--~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip 368 (415)
|+++|++++||| ++..|-.+ ..=..++.+.++-..++++.+ ..-..+||+.+|+=.+.|-.+ ++.+.+-
T Consensus 291 L~~~gl~~~did~~~~v~Hq~n-----~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~---~~~~~~~ 362 (391)
T PLN03169 291 MKKAGLVEKDYNDLFWAVHPGG-----PAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYM---REELKKK 362 (391)
T ss_pred HHHcCCCCCCCCcceEEecCCC-----HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHH---HHhhccc
Confidence 999999999998 88899333 334445555555332222211 123456888888644444322 2222220
Q ss_pred CCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 369 PNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 369 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+ ..+.++++..+||-|=+...+||+
T Consensus 363 ~--------------------~~~gd~~ll~afG~G~s~~~~ll~ 387 (391)
T PLN03169 363 G--------------------EEDEEWGLILAFGPGITFEGILAR 387 (391)
T ss_pred C--------------------CCCCcEEEEEEEcccHhHHHHHHh
Confidence 0 012467788888877666655554
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=7.2e-12 Score=121.17 Aligned_cols=232 Identities=14% Similarity=0.094 Sum_probs=144.1
Q ss_pred CHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccch
Q psy5222 67 ILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSN 146 (415)
Q Consensus 67 ~~~~~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (415)
..+......-...|+.+|+++||+++|+++++ ++ -+++.+..+.. . ..
T Consensus 92 ~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~d--Id----~li~~t~t~~~-------------------------~-P~ 139 (391)
T PLN03173 92 DARQDMVVVEVPKLGKEAAAKAIKEWGQPKSK--IT----HLVFCTTSGVD-------------------------M-PG 139 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEccCCCc-------------------------c-cH
Confidence 34444444556689999999999999999888 76 45555433210 1 25
Q ss_pred HHHHHHHHhCCCCc---cccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCC
Q psy5222 147 QIGIMSEIFNIRGE---GFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPK 223 (415)
Q Consensus 147 ~a~~ia~~lgl~Gp---~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~ 223 (415)
++.+++..||++.- .+.+..+|++++.+|..|.++++++..+.|||+++|.+...+ .. ++
T Consensus 140 ~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~----------~~-------~~ 202 (391)
T PLN03173 140 ADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTF----------RG-------PS 202 (391)
T ss_pred HHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhhh----------CC-------cc
Confidence 67899999999763 456799999999999999999999999999999999422100 00 00
Q ss_pred CcccCCCCCCCCccccceEEEEEeCChhhHHhcCC-eeEEEEEeEE--------------eccCCCCC-CCC-----CHH
Q psy5222 224 KTCRPFDKLAEGFIYGQASAALLIEGNKNIKILNK-SYLARLLGGV--------------INLHATAS-PEP-----NLN 282 (415)
Q Consensus 224 ~~~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~-~i~a~i~g~~--------------~~~~~~~~-~~~-----~~~ 282 (415)
. +-.+......++||||+|+||+..+.. +. .+.-++.+.. ....|... ... -..
T Consensus 203 d--~~~~~~v~~~LFGDGAaAvvl~~~~~~---~~~~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~ 277 (391)
T PLN03173 203 D--THLDSLVGQALFGDGAAAIIIGSDPVL---GVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISK 277 (391)
T ss_pred c--cchhhhhhhhhhcCceEEEEEeCCCCC---CcCCcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHH
Confidence 0 000001234779999999999864321 11 1111332221 11111111 111 134
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHHHHHHHH
Q psy5222 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSGIVEIIA 357 (415)
Q Consensus 283 ~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg~~~l~~ 357 (415)
.+...+++.|++.|++.+||+++..|--+. .=..++.+.++-..+++..+ ..-..+|++.+||=.+-+-.
T Consensus 278 ~~~~~i~~~L~~~gl~~~di~~~v~Hqgg~-----~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~ 348 (391)
T PLN03173 278 NVEKSLTEAFKPLGISDWNSLFWIAHPGGP-----AILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDE 348 (391)
T ss_pred HHHHHHHHHHHhcCCCccccCeEEECCCcH-----HHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHH
Confidence 567788999999999999999999994444 34555556555322222211 23345688888864444443
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.1e-11 Score=120.14 Aligned_cols=270 Identities=12% Similarity=0.070 Sum_probs=160.7
Q ss_pred CHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccch
Q psy5222 67 ILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSN 146 (415)
Q Consensus 67 ~~~~~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (415)
..+......-...|+.+|+++||+++|+++++ |+ -+|+++..+.. + ..
T Consensus 91 ~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~d--Id----~lI~~T~Tg~~-------------------------~-Ps 138 (389)
T PLN03168 91 NVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSD--IT----HIVFATTSGVN-------------------------M-PG 138 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEECCCCCC-------------------------C-cc
Confidence 44444555566789999999999999999988 77 56666543211 1 25
Q ss_pred HHHHHHHHhCCCCc---cccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCC
Q psy5222 147 QIGIMSEIFNIRGE---GFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPK 223 (415)
Q Consensus 147 ~a~~ia~~lgl~Gp---~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~ 223 (415)
++.+++..||++.- ++.+..+|++++.+|..|..+|++|....|||+++|.+.. . +.. +.
T Consensus 139 ~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S~--~---~~~------------~~ 201 (389)
T PLN03168 139 ADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTAV--T---YRA------------PS 201 (389)
T ss_pred HHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhhh--h---ccC------------cc
Confidence 67899999999762 5889999999999999999999999999999999994221 0 000 00
Q ss_pred CcccCCCCCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEe--------------ccCCCCC-CCC-----CHHH
Q psy5222 224 KTCRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVI--------------NLHATAS-PEP-----NLNN 283 (415)
Q Consensus 224 ~~~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~--------------~~~~~~~-~~~-----~~~~ 283 (415)
. ...+......++||||+|+||+..+.... ...++ .+..... ...+... ... -...
T Consensus 202 ~--~~~~~~~~~~LFGDGAaAvvl~~~~~~~~-~~~~~-~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~ 277 (389)
T PLN03168 202 E--NHLDGLVGSALFGDGAGVYVVGSDPKPEV-EKALF-EVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKN 277 (389)
T ss_pred c--ccHHHHhccccccCccEEEEEecCCCCcc-CCcce-EEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHH
Confidence 0 00111124578999999999997432110 11122 2221111 0111101 011 1233
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHHHHHHHHHHHHh
Q psy5222 284 EISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSGIVEIIASVIQM 362 (415)
Q Consensus 284 ~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg~~~l~~~~~~l 362 (415)
+...++++|+..++...|++++..|--+. .=..++.+.++-..+++..+ ..-..+|++.+||=.+.|-. +
T Consensus 278 ~~~~l~~~l~~~~~~~~d~~~~v~Hqgg~-----~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~----~ 348 (389)
T PLN03168 278 IEKFLNEARKCVGSPDWNEMFWAVHPGGP-----AILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQ----I 348 (389)
T ss_pred HHHHHHHHHHhcCCCccccceEEecCCcH-----HHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHH----H
Confidence 46677777888888877889999994443 34555555555332222211 23345688888864444433 2
Q ss_pred hcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 363 RKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 363 ~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.++.+-+-... ..-..+.++..+||-|=+..+++|+
T Consensus 349 ~~~~~~~g~~~---------------~~~g~~~~ll~afGpG~t~~~~llr 384 (389)
T PLN03168 349 RQRSVKMGAST---------------LGEGSEFGFFIGFGPGLTLEVLVLR 384 (389)
T ss_pred HHHHhhcCCCC---------------CCCCccEEEEEEEcchhhhhhhhhe
Confidence 22222110000 0011367788888887776666665
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.4e-11 Score=114.31 Aligned_cols=210 Identities=13% Similarity=0.128 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|++.|+++||+++ ++++ ++ -+++++..+... ....+..+...||
T Consensus 49 ~~~la~~Aa~~aL~~a--~~~~--Id----~li~~t~s~~~~-------------------------~~s~a~~v~~~Lg 95 (379)
T TIGR01835 49 IVTMAASAAKPILDRN--DKQK--ID----MVIFGTESGIDQ-------------------------SKAAAVYVHGLLG 95 (379)
T ss_pred HHHHHHHHHHHHHHhC--CHhh--CC----EEEEEeCCCCCC-------------------------CCCHHHHHHHHhC
Confidence 3589999999999998 6666 65 466775432210 1146789999999
Q ss_pred CCC--ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCC
Q psy5222 157 IRG--EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAE 234 (415)
Q Consensus 157 l~G--p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~ 234 (415)
+++ +++.+..+|++++.||..|..+|++|..+.+||.++|.. . .. .....
T Consensus 96 l~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a---------------~-----------~~--~~~~~ 147 (379)
T TIGR01835 96 LQPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDIA---------------K-----------YG--LESPG 147 (379)
T ss_pred CCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehh---------------h-----------cc--cCCCC
Confidence 974 778899999999999999999999999999999999930 0 00 00112
Q ss_pred CccccceEEEEEeCChhhHHhcCCeeEEEEE-eEEe-ccCCCCC------CCC--C--------HHHHHHHHHHHHHHcC
Q psy5222 235 GFIYGQASAALLIEGNKNIKILNKSYLARLL-GGVI-NLHATAS------PEP--N--------LNNEISVMNSVLKQSG 296 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~A~~~g~~i~a~i~-g~~~-~~~~~~~------~~~--~--------~~~~~~~~~~aL~~Ag 296 (415)
-.++||||+|+||++.. .+. .+. +... ..+.... ..| + ...+.+++++.|++.|
T Consensus 148 ~~~~GdGA~A~Ll~~~~-------~i~-~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g 219 (379)
T TIGR01835 148 EPTQGAGAVAMLVSADP-------KLL-AINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTG 219 (379)
T ss_pred CccccCccEEEEEecCC-------Cee-EEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 24689999999998642 122 111 1111 1111100 111 1 1245688889999999
Q ss_pred CCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCc----ee-----eeecccccchhHhhHHHHHHHHHH
Q psy5222 297 LKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSK----LL-----LNSTKSLTGHCLYSSGIVEIIASV 359 (415)
Q Consensus 297 l~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~----~~-----v~~~k~~~Gh~~~asg~~~l~~~~ 359 (415)
++++|||++..|-..++.. .+++++++.....+ +. -......+||+.+||=.+.+..++
T Consensus 220 ~~~~did~~i~H~p~~~~~----~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l 287 (379)
T TIGR01835 220 LSLADFAAFCFHVPFTKMG----LKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLL 287 (379)
T ss_pred CCHHHcCEEEECCCCCcHH----HHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHH
Confidence 9999999999997666532 22333333211000 00 001234679999998766666543
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.3e-11 Score=109.92 Aligned_cols=232 Identities=15% Similarity=0.068 Sum_probs=148.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||++||+++++ +| .+++|.... . ...+..++..+|
T Consensus 56 eseLa~eAa~~ALekAGI~~~D--ID----~lI~Gdll~-Q---------------------------~~sAs~vA~~LG 101 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSD--ID----YLLAGDLLN-Q---------------------------IISANFAARELG 101 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEECCCC-C---------------------------cchHHHHHHHhC
Confidence 4589999999999999999988 77 466663210 0 134567888888
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCc
Q psy5222 157 IRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGF 236 (415)
Q Consensus 157 l~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~ 236 (415)
+ |.+.|.++|+++..||..|+.+|++|.+|.|||++.+...+.+.-..| .. ..+..|| ..-.
T Consensus 102 I--Pa~dV~gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerqfr~------P~------eyg~qrp----~taq 163 (337)
T PRK08304 102 I--PFLGLYGACSTMMESLALGSMLIDGGFADRVLAATSSHFATAERQFRF------PT------EYGGQRP----PTAQ 163 (337)
T ss_pred C--cEEEEeccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhhccC------ch------hccccCC----Ccce
Confidence 6 999999999999999999999999999999999999953333211100 00 0112232 2334
Q ss_pred cccceEEEEEeCChhhHHhcCCee----EEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCC
Q psy5222 237 IYGQASAALLIEGNKNIKILNKSY----LARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSS 312 (415)
Q Consensus 237 ~~geGa~alvL~~~~~A~~~g~~i----~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt 312 (415)
..++||+++||.+.. .+-+| .++|..++.. |+..+..-..++....+.+-|++-|.+|+|-|.|..-+-|.
T Consensus 164 wtvtGAGA~i~~~~~----~~~~i~~~t~Gkv~D~g~~-d~~nmgaaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg~ 238 (337)
T PRK08304 164 WTVTGAGAVLLSREG----SGPRITHATIGKVVDLGIK-DPNDMGAAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLGR 238 (337)
T ss_pred EEeeccEEEEEecCC----CCceEEEEeEEEEEecCCC-CcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEEcchHH
Confidence 578999999998652 12222 1344444442 33333222244556778888999999999999999876665
Q ss_pred CCCCHHHHHHHHHHHhcCCC---------ceeeee-ccccc---chhHhhHHHHHHHHHHHHhhcCccCCC
Q psy5222 313 PLGDKIEISAIKEVYKNHFS---------KLLLNS-TKSLT---GHCLYSSGIVEIIASVIQMRKKFIHPN 370 (415)
Q Consensus 313 ~~~d~~E~~al~~~~~~~~~---------~~~v~~-~k~~~---Gh~~~asg~~~l~~~~~~l~~~~ip~~ 370 (415)
. -..-+.+++.+++- .+.+.. .+..+ |---|+|..+-.-..+-.|++|.+-..
T Consensus 239 v-----G~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~~~~~~~~~~~g~~~rv 304 (337)
T PRK08304 239 V-----GREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVTYGYLLKELQKGKLKRV 304 (337)
T ss_pred H-----HHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHHHHHHHHHHhcCCceEE
Confidence 2 33444455543321 112222 12111 444456666666667778888775433
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.4e-10 Score=110.18 Aligned_cols=249 Identities=12% Similarity=0.029 Sum_probs=147.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
.......++.++|+++|+++++ +| -+|+.++. . .....++.+|...+|
T Consensus 188 a~~v~~~~~~~lL~kaGi~p~d--ID----~LIv~cS~--~------------------------~p~PSlAa~I~n~LG 235 (521)
T PLN02854 188 AEAVMFGALDSLFSKTGVKPRD--IG----ILIVNCSL--F------------------------NPTPSLSAMIVNHYK 235 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEECCC--C------------------------CCCCCHHHHHHHHhC
Confidence 4466777889999999999888 76 34444221 0 011367889999999
Q ss_pred CC-C-cccccc-ccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 157 IR-G-EGFIIG-GASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 157 l~-G-p~~~v~-~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
++ . .++.++ .||++++.+|..|.++|+.|....+||+++|.. +. .+ .+-+.+.
T Consensus 236 lr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~-S~-~~----------------------y~g~Drs 291 (521)
T PLN02854 236 LRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENI-TL-NW----------------------YFGNDRS 291 (521)
T ss_pred CCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeee-ec-CC----------------------CCCCchh
Confidence 97 3 678888 799999999999999999999999999999942 20 00 0001112
Q ss_pred C---CccccceEEEEEeCChhhHHhc-CCeeEEEEEeEEeccC--------------CC---CC--CCCC----------
Q psy5222 234 E---GFIYGQASAALLIEGNKNIKIL-NKSYLARLLGGVINLH--------------AT---AS--PEPN---------- 280 (415)
Q Consensus 234 ~---G~~~geGa~alvL~~~~~A~~~-g~~i~a~i~g~~~~~~--------------~~---~~--~~~~---------- 280 (415)
. ...+||||+|+||++.+..+.+ .-++.. +.......| |. .. ..+.
T Consensus 292 ~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~-~v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i 370 (521)
T PLN02854 292 MLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVH-TVRTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNI 370 (521)
T ss_pred hhcceeeeccceeEEEEecccccccccchheee-EEEEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhh
Confidence 2 4679999999999874311110 001101 111111111 10 00 0000
Q ss_pred ----------HH-H--HHHHHHHHHHHcCCCC------CcccEEEecCCCCCCCCHHHHHHHHHHHhcCCC-ceeeeecc
Q psy5222 281 ----------LN-N--EISVMNSVLKQSGLKK------NMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFS-KLLLNSTK 340 (415)
Q Consensus 281 ----------~~-~--~~~~~~~aL~~Agl~~------~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~-~~~v~~~k 340 (415)
.+ . ....+++.|.++|+++ .|||++..|.-|. .=..++++-++-... .-+.-..-
T Consensus 371 ~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr-----~IId~v~k~LgL~~~~~e~sr~tL 445 (521)
T PLN02854 371 TTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGR-----AVLDELQKNLQLSDWHMEPSRMTL 445 (521)
T ss_pred hhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCH-----HHHHHHHHHcCCCcccccchHHHh
Confidence 01 0 2456788899999987 6899999995444 445566665553211 11222233
Q ss_pred cccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 341 SLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 341 ~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
..+|++.++|=.+.+..+ +++|.+ .+.++++..+||.|=.-.++|++
T Consensus 446 ~rfGNTSSASI~~~L~~~---~~kGri-----------------------k~GD~Vl~iaFGsGft~~sav~~ 492 (521)
T PLN02854 446 HRFGNTSSSSLWYELAYT---EAKGRV-----------------------SAGDRVWQIAFGSGFKCNSAVWK 492 (521)
T ss_pred hhcCChHhhHHHHHHHHH---HHcCCC-----------------------CCCCEEEEEEEchhhhhhheeeE
Confidence 445888777644444333 233332 12356677777777666666654
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.3e-09 Score=101.69 Aligned_cols=234 Identities=16% Similarity=0.197 Sum_probs=156.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..-|+++|++++|+++++++.+ +. .|++|+.++..... ..++.|+..||
T Consensus 51 ~vTmaveAA~~~l~r~~~D~~~--Ig----~v~vgTES~~d~~K-------------------------~~at~v~~~lg 99 (377)
T COG3425 51 AVTMAVEAARNALKRADIDPSK--IG----AVIVGSESGPDAVK-------------------------PTATIVAEALG 99 (377)
T ss_pred HHHHHHHHHHHHHhccCCCHHH--Cc----eEEEecCCCccccc-------------------------chHHHHHHHhC
Confidence 4579999999999999877666 54 57777554433222 45778999999
Q ss_pred CCCcc--ccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCC
Q psy5222 157 IRGEG--FIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAE 234 (415)
Q Consensus 157 l~Gp~--~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~ 234 (415)
+.--. +-+..+|-+|..||..|..+|.+|..+.+||+|.|.. ... +. +.-
T Consensus 100 ~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a-----------~~~---------~~--------~~~ 151 (377)
T COG3425 100 LNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTA-----------QYA---------PG--------DAL 151 (377)
T ss_pred CCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhh-----------ccC---------CC--------ccc
Confidence 96533 3377899999999999999999999999999999941 000 00 012
Q ss_pred CccccceEEEEEeCChhhHHhcCCeeEEEEEeEEecc-CCCCC------CCC------C----HHHHHHHHHHHHHHcCC
Q psy5222 235 GFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINL-HATAS------PEP------N----LNNEISVMNSVLKQSGL 297 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~-~~~~~------~~~------~----~~~~~~~~~~aL~~Agl 297 (415)
-...|.|++|+|+...+ .+.+.+.+.++.. |-... +.| + ...+..+.+..+++.|+
T Consensus 152 E~t~GAGavA~lIg~n~-------~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gl 224 (377)
T COG3425 152 EYTAGAGAVAFLIGKNP-------PIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGL 224 (377)
T ss_pred CccCCCceEEEEEccCC-------CeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCC
Confidence 24478999999999632 2344554444322 21111 111 1 34567777888889999
Q ss_pred CCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCC
Q psy5222 298 KKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP 376 (415)
Q Consensus 298 ~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~ 376 (415)
+++|.||+..|-+.+++ -..+++.+.-.. +.+.-+ .....+|++-.+|..+.++.++-.-+
T Consensus 225 s~~dfdy~vfH~P~~k~----~~ka~k~l~~~~-e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~------------- 286 (377)
T COG3425 225 SPDDFDYIVFHQPNGKF----PKKAAKSLGFKE-EQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK------------- 286 (377)
T ss_pred ChhhhCeEEecCCCCch----HHHHHHHhCccH-hhcCccchhhhhcCcccchhHHHHHHHHHhhcC-------------
Confidence 99999999999887763 344554443321 122212 22236899999998888876654311
Q ss_pred CCCCCCcccCcccccCCCEEEEeccCcCCcee
Q psy5222 377 IDNQANFSGKKSISININNVMSNSFGFSGINS 408 (415)
Q Consensus 377 ~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~ 408 (415)
.+.+++++-|||.|-..-
T Consensus 287 --------------~~G~rIl~~SYGSGa~s~ 304 (377)
T COG3425 287 --------------LPGDRILLFSYGSGAGSE 304 (377)
T ss_pred --------------CCCCEEEEEeeCCCccee
Confidence 235788888998776543
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.3e-09 Score=107.60 Aligned_cols=118 Identities=14% Similarity=0.182 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
-...++..|+.+||+++|+++++ +| -+++. ..+. .....++.+|...|
T Consensus 171 ea~~l~~~A~~~aL~kaGi~p~d--ID----~LVv~-cS~~-------------------------~~~PSlaa~V~~~L 218 (502)
T PLN02377 171 EAEQVMFGALDNLFANTNVNPKD--IG----ILVVN-CSLF-------------------------NPTPSLSAMIVNKY 218 (502)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEE-CCCC-------------------------CCCCcHHHHHHHHh
Confidence 45689999999999999999988 76 34442 2210 01136688999999
Q ss_pred CCCC--cccccc-ccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCC
Q psy5222 156 NIRG--EGFIIG-GASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKL 232 (415)
Q Consensus 156 gl~G--p~~~v~-~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~ 232 (415)
|++. .++.++ .||++++.+|..|.++|+.|....|||+++|.. +.. .. ++.+
T Consensus 219 Glr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~-S~~-----------------------~~-~~d~ 273 (502)
T PLN02377 219 KLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENI-TQN-----------------------WY-FGNK 273 (502)
T ss_pred CCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEecc-ccc-----------------------cC-CCCC
Confidence 9984 788899 699999999999999999999999999999942 210 00 1112
Q ss_pred CC----CccccceEEEEEeCCh
Q psy5222 233 AE----GFIYGQASAALLIEGN 250 (415)
Q Consensus 233 ~~----G~~~geGa~alvL~~~ 250 (415)
+. ...+||||+|+||+..
T Consensus 274 ~s~lv~n~LFgDGAaAvlLs~~ 295 (502)
T PLN02377 274 KSMLIPNCLFRVGGSAVLLSNK 295 (502)
T ss_pred ccccccceeeccccEEEEEecc
Confidence 22 3678999999999874
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.2e-09 Score=99.76 Aligned_cols=232 Identities=11% Similarity=0.042 Sum_probs=145.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||++||+++++ ++ -+++|...+ + ..++..++..||
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~D--ID----~i~vGdL~n-Q---------------------------~ipssfvar~LG 99 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKED--IQ----FFLAGDLMN-Q---------------------------ITPTSFAARTLG 99 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecCC-C---------------------------cCcHHHHHHHhC
Confidence 4489999999999999999988 77 456653321 0 133457888888
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCc
Q psy5222 157 IRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGF 236 (415)
Q Consensus 157 l~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~ 236 (415)
+ |.+.|.++|+++..||..|+.+|++|.+|.|||+......+.+.-..| .. ..+.-||....
T Consensus 100 I--P~~gV~gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErqfR~------P~------eyG~Qrp~taq---- 161 (334)
T PRK12404 100 I--PYLGLFGACSTSMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQFRY------PT------EYGGQKPPTAQ---- 161 (334)
T ss_pred C--CccceeecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhhccC------cc------cccCcCCCccc----
Confidence 4 789999999999999999999999999999999998754433322111 10 11233443322
Q ss_pred cccceEEEEEeCChhhHHhcCCee----EEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCC
Q psy5222 237 IYGQASAALLIEGNKNIKILNKSY----LARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSS 312 (415)
Q Consensus 237 ~~geGa~alvL~~~~~A~~~g~~i----~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt 312 (415)
.---|++++||.+.. .+-+| .++|..++.. |+..+..-..++....|.+-|++-|.+|+|-|.|..-+-|.
T Consensus 162 wTvTgaga~~l~~~~----~~~~i~~~T~Gkv~D~g~~-d~~nMGaaMAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg~ 236 (334)
T PRK12404 162 WTVTGAGAAILSKTG----DGPRVTSATIGRVVDMGLT-DPFNMGGAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLGH 236 (334)
T ss_pred EEEEceEEEEEecCC----CCceEEEEEEEEEEecCCC-CcccchhhhhHHHHHHHHHHHHHhCCChhhccEEEEcchHH
Confidence 123468888887642 12222 1344444442 33333222244556778888999999999999999876665
Q ss_pred CCCCHHHHHHHHHHHhcCCCce----------eeeeccccc---chhHhhHHHHHHHHHHHHhhcCccCCC
Q psy5222 313 PLGDKIEISAIKEVYKNHFSKL----------LLNSTKSLT---GHCLYSSGIVEIIASVIQMRKKFIHPN 370 (415)
Q Consensus 313 ~~~d~~E~~al~~~~~~~~~~~----------~v~~~k~~~---Gh~~~asg~~~l~~~~~~l~~~~ip~~ 370 (415)
+-..-+.+++.+++-.+ .+......+ |---|+|..+-.-..+-.|++|.+-..
T Consensus 237 -----vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v~~g~~~~~~~~g~~~rv 302 (334)
T PRK12404 237 -----VGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATVTYGHLLNRMKRGELKRI 302 (334)
T ss_pred -----HHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHHHHHHHHHHHhcCCceEE
Confidence 23444555554432211 121111111 344456666666667777888775433
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.2e-10 Score=92.91 Aligned_cols=122 Identities=20% Similarity=0.175 Sum_probs=84.4
Q ss_pred eeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeee
Q psy5222 259 SYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNS 338 (415)
Q Consensus 259 ~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~ 338 (415)
+|+++|.++....... .....+...+++++|+++|++++|||++|+|..++. .+. +..+.++-...++++.+
T Consensus 2 ~pla~i~~~~~~~~~P---~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~----~~l-~~~~~lg~~~~~vN~~G 73 (123)
T PF02803_consen 2 KPLARIVGYASAGVDP---EDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAA----QVL-AFLEALGLDPEKVNPNG 73 (123)
T ss_dssp -ESEEEEEEEEEE--G---GGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHH----HHH-HHHHHHTTGGGGBSTT-
T ss_pred CeEEEEEEEEEEecCH---HHhCchHHHHHHHHHHHhCCCccccchhhccchhhh----HHH-HhhccccccccccCccc
Confidence 5789999988765221 112445678999999999999999999999966652 222 33333443334666666
Q ss_pred cccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 339 TKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 339 ~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..-.+|||.||||++.++.++.+|+++ ..++.+...-+-||...++||||
T Consensus 74 G~la~GHP~gasG~r~~~~l~~~L~~~--------------------------~~~~gla~~~~ggG~g~a~ller 123 (123)
T PF02803_consen 74 GALALGHPLGASGARLVVELAHQLRRR--------------------------GGRYGLAAICAGGGQGSAVLLER 123 (123)
T ss_dssp -HHHH-BHTTTHHHHHHHHHHHHHHHH--------------------------TTSEEEEEEEETTTEEEEEEEEE
T ss_pred ccccccccccccccchhhhhHHHHHHh--------------------------chhhhhHHhcccceeeEEEEEEC
Confidence 666689999999999999999999863 13677888888899999999986
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.1e-09 Score=96.19 Aligned_cols=123 Identities=13% Similarity=0.137 Sum_probs=109.9
Q ss_pred CCCHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhccccc
Q psy5222 65 EFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMD 144 (415)
Q Consensus 65 ~~~~~~~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (415)
.|++.+.|+|++..||++.++.+++++. .. ++ .+|+++..|....+..+.+.+.++ +.++|..|.++++
T Consensus 22 ~lp~m~rRRls~~~rla~~~a~~~~~~~----~~--~d----~~VfaS~~Gel~~t~~ll~~l~~~-~~lSPT~Fs~SVH 90 (218)
T PF13723_consen 22 FLPPMQRRRLSRLSRLALEAALECLAED----EQ--PD----AIVFASRHGELERTFKLLEALAEE-EELSPTAFSQSVH 90 (218)
T ss_pred cCCHHHHcccCHHHHHHHHHHHHHHhcc----CC--CC----cEEEEeCCCcHHHHHHHHHHHHhC-CCcCccchhhhhh
Confidence 6899999999999999999999999653 12 32 688998899988888888888765 4599999999999
Q ss_pred chHHHHHHHHhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCC
Q psy5222 145 SNQIGIMSEIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDL 199 (415)
Q Consensus 145 ~~~a~~ia~~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~ 199 (415)
|.+++++++..+.++|+.++..+-.+...||..|+.++..| .+.||++.+|..+
T Consensus 91 NA~aG~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~ 144 (218)
T PF13723_consen 91 NAAAGYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPL 144 (218)
T ss_pred hHHHHHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCC
Confidence 99999999999999999999999999999999999999999 9999999999533
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.8e-09 Score=102.88 Aligned_cols=120 Identities=17% Similarity=0.168 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
-...++..|+++||+++|+++++ ++ -+|+.++.+. ....++.+|...+
T Consensus 147 ea~~la~~Aa~~aL~~agi~p~d--Id----~lIv~tst~~--------------------------~~Pslaa~V~~~l 194 (478)
T PLN02932 147 ETEEVIIGAVDNLFRNTGISPSD--IG----ILVVNSSTFN--------------------------PTPSLSSILVNKF 194 (478)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEccCCC--------------------------CCCcHHHHHHHHh
Confidence 35689999999999999999888 76 4555543321 1136788999999
Q ss_pred CCCC--cccccc-ccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCC-
Q psy5222 156 NIRG--EGFIIG-GASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDK- 231 (415)
Q Consensus 156 gl~G--p~~~v~-~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~- 231 (415)
|++. .++.++ .||++++.+|..|.++|+.|....|||+++|.+ +... .+-+.
T Consensus 195 Glr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~-S~~~-----------------------~~~d~r 250 (478)
T PLN02932 195 KLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENI-TQNL-----------------------YLGNNK 250 (478)
T ss_pred CCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeec-cccc-----------------------CCCcch
Confidence 9973 788898 899999999999999999999999999999942 2111 00010
Q ss_pred --CCCCccccceEEEEEeCChh
Q psy5222 232 --LAEGFIYGQASAALLIEGNK 251 (415)
Q Consensus 232 --~~~G~~~geGa~alvL~~~~ 251 (415)
.-....+||||+|+||+..+
T Consensus 251 ~~l~t~~LFgDGAAAvlLs~~~ 272 (478)
T PLN02932 251 SMLVTNCLFRIGGAAILLSNRS 272 (478)
T ss_pred hhhccceeecccceEEEEeccc
Confidence 01346789999999999754
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.1e-09 Score=103.99 Aligned_cols=175 Identities=15% Similarity=0.114 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHH---
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMS--- 152 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia--- 152 (415)
....|++.|+++||+++|+++++ |+ -+++++..+... . ...+..|.
T Consensus 52 d~~tmA~~AA~~aL~~agid~~~--Id----llivaTeT~~d~----------------~---------ps~A~~v~~ll 100 (459)
T PLN02577 52 DVISMSLTVVKSLLEKYNIDPKQ--IG----RLEVGSETVIDK----------------S---------KSIKTFLMQLF 100 (459)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEcCCCCCC----------------C---------CchHHHHHHHH
Confidence 45689999999999999998888 76 477775443211 0 13445554
Q ss_pred HHhCCCC-ccccccccchhHHHHHHHHHHHHHcCCC--CeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCC
Q psy5222 153 EIFNIRG-EGFIIGGASASGNIGIIHGMRLIQNNIV--DACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPF 229 (415)
Q Consensus 153 ~~lgl~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~--d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pf 229 (415)
..+|.+. +++-+..+|.++..||..|..+|++|.. +.+||+++|. .+. ...|
T Consensus 101 ~~LG~~~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~---------------a~~---------~~~~- 155 (459)
T PLN02577 101 EESGNTDIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADS---------------AVY---------AEGP- 155 (459)
T ss_pred HHhCCCCcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEech---------------hhc---------cCCC-
Confidence 4566654 7788999999999999999999999985 9999999993 110 0001
Q ss_pred CCCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEec--cCCCCC-C---CC--C--------HHHHHHHHHHHHH
Q psy5222 230 DKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVIN--LHATAS-P---EP--N--------LNNEISVMNSVLK 293 (415)
Q Consensus 230 d~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~--~~~~~~-~---~~--~--------~~~~~~~~~~aL~ 293 (415)
. -...|+||+|+||+..+. + .+-....|..+. .|-... . -| + ...+..+.++.++
T Consensus 156 ~----e~t~GdGA~A~lv~~~~~----~-~l~~~~~g~~~~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~ 226 (459)
T PLN02577 156 A----RPTGGAGAVAMLVGPNAP----I-VFESKYRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCE 226 (459)
T ss_pred C----CCCCCcceEEEEEccCCC----c-eeecccccccCcccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHH
Confidence 1 112399999999985321 1 010111112111 000000 0 01 1 2333455555665
Q ss_pred Hc------CCCCCcccEEEecCCCCCCC
Q psy5222 294 QS------GLKKNMIDYLNTHGSSSPLG 315 (415)
Q Consensus 294 ~A------gl~~~dId~v~~h~~gt~~~ 315 (415)
+. |++++|+|++..|-..+++.
T Consensus 227 k~~~~~~~g~~~~d~d~~vfHqP~~km~ 254 (459)
T PLN02577 227 KYEKLEGKQFSISDADYFVFHAPYNKLV 254 (459)
T ss_pred HhhcccccCCCHHHcCEEEecCCccchh
Confidence 55 88899999999998887754
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.5e-09 Score=99.79 Aligned_cols=90 Identities=13% Similarity=0.014 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..+|+..+++++|+++++++++ ++ .|++|+...... ...++.+++...|
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~--Id----~v~~G~~~~~~~-------------------------g~~~ar~~~l~aG 74 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPED--ID----AVIVGNVLQEGE-------------------------GQNIARQAALAAG 74 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGG--EE----EEEEE-SSSCTT-------------------------TCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcccchhh--hh----hcCccccccccc-------------------------chhhhhhhhhhcc
Confidence 4588999999999999999988 77 688884332111 1245667777778
Q ss_pred C--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCC
Q psy5222 157 I--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMT 197 (415)
Q Consensus 157 l--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~ 197 (415)
+ +-|.++|+.+|+||+.||..|++.|++|++|++|+||+|+
T Consensus 75 l~~~vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~ 117 (264)
T PF00108_consen 75 LPESVPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVES 117 (264)
T ss_dssp S-TTSEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEE
T ss_pred cccccceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccc
Confidence 7 3499999999999999999999999999999999999995
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=98.97 E-value=9.2e-08 Score=93.62 Aligned_cols=91 Identities=10% Similarity=0.132 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|++.|++++|+++++++++ |+ -|++|+..+.... ...+..+...|
T Consensus 49 d~~tma~~AA~~lL~~a~id~~~--Id----~Liv~TeS~~d~s-------------------------ps~a~~v~~lL 97 (454)
T TIGR01833 49 DINSLCLTVVSKLMERYNIDYNQ--IG----RLEVGTETIIDKS-------------------------KSVKTVLMQLF 97 (454)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEECCCCCCCC-------------------------CchHHHHHHHH
Confidence 46789999999999999998888 76 4666654432211 14566677655
Q ss_pred C---CCC-ccccccccchhHHHHHHHHHHHHHcCCC--CeEEEeecCC
Q psy5222 156 N---IRG-EGFIIGGASASGNIGIIHGMRLIQNNIV--DACLIISAMT 197 (415)
Q Consensus 156 g---l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~--d~vlvgg~e~ 197 (415)
+ .+. .++-+..+|+++..||..|..+|++|.. +.+||+++|.
T Consensus 98 ~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 98 EESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred HhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 4 433 6778999999999999999999999974 8999999993
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.9e-08 Score=95.71 Aligned_cols=89 Identities=19% Similarity=0.132 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...+...|+++||+++|+++++ +| -+|+.++.. .....++..|...+|
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~D--ID----iLIv~~S~~--------------------------~~~PSlaa~I~n~lG 223 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKD--IG----ILIVNCSLF--------------------------NPTPSLSAMVINHYK 223 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEECCCC--------------------------CCCchHHHHHHHHhC
Confidence 4578899999999999999888 76 344443211 011367789999999
Q ss_pred CCC--cccccc-ccchhHHHHHHHHHHHHHcCCCCeEEEeecCC
Q psy5222 157 IRG--EGFIIG-GASASGNIGIIHGMRLIQNNIVDACLIISAMT 197 (415)
Q Consensus 157 l~G--p~~~v~-~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~ 197 (415)
++. .++.++ .||++++.||..|.++|+.+....+||+++|.
T Consensus 224 lr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~ 267 (511)
T PLN02192 224 LRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMEN 267 (511)
T ss_pred CCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEe
Confidence 974 788999 69999999999999999999999999999994
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.67 E-value=9.4e-08 Score=85.76 Aligned_cols=190 Identities=13% Similarity=0.108 Sum_probs=125.9
Q ss_pred cCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHH
Q psy5222 73 KSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMS 152 (415)
Q Consensus 73 ~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 152 (415)
.......+.+.+.++||+.+++.+.+ ++ .+++.++.|.. ...+-.+|.
T Consensus 72 fie~a~~l~v~a~r~aL~~~~l~ped--Id----~vv~vtsTG~~--------------------------~Ps~dari~ 119 (356)
T COG3424 72 FIEEAVPLGVDALRRALDGSPLRPED--ID----AVVTVTSTGLA--------------------------TPSLDARIV 119 (356)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCHHH--Cc----EEEEEeecccc--------------------------CCChhHHHH
Confidence 33445689999999999999999888 76 34444333211 013335788
Q ss_pred HHhCCCCccc---cccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCC
Q psy5222 153 EIFNIRGEGF---IIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPF 229 (415)
Q Consensus 153 ~~lgl~Gp~~---~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pf 229 (415)
..||+.-.+. .-.-||+++..+|..|++..+..-...|||+.+|.|.-.. ++
T Consensus 120 ~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vlvV~vELCSLt~-------------------------~~ 174 (356)
T COG3424 120 GELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELCSLTY-------------------------VF 174 (356)
T ss_pred hhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeeeeeeee-------------------------ec
Confidence 8888853222 2346999999999999999999999999999999542211 11
Q ss_pred CCCCC-C----ccccceEEEEEeCChhhHHhcC-Cee--E----------EEEEeEEeccCCCCC-CCCC-----HHHHH
Q psy5222 230 DKLAE-G----FIYGQASAALLIEGNKNIKILN-KSY--L----------ARLLGGVINLHATAS-PEPN-----LNNEI 285 (415)
Q Consensus 230 d~~~~-G----~~~geGa~alvL~~~~~A~~~g-~~i--~----------a~i~g~~~~~~~~~~-~~~~-----~~~~~ 285 (415)
..+.+ . -.+|||++|+|+.-...++... .++ + =.+.||.....|.+. .+.+ ...+.
T Consensus 175 ~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~ 254 (356)
T COG3424 175 ADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLA 254 (356)
T ss_pred CCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhh
Confidence 11111 2 3589999999997533222111 111 0 123455555555554 3333 34457
Q ss_pred HHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHH
Q psy5222 286 SVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIE 319 (415)
Q Consensus 286 ~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E 319 (415)
..+...|...+++.+||+.+..|--|-+.-|++|
T Consensus 255 ~~V~~fL~~~~ls~~dI~~w~~HPGG~KVida~~ 288 (356)
T COG3424 255 PNVTTFLATHGLSIEDIEAWVVHPGGPKVIDAYE 288 (356)
T ss_pred hhHHHHHHHcCCchhhhceeeeCCCCchHHHHHH
Confidence 8889999999999999999999977766555554
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.40 E-value=7.8e-07 Score=86.54 Aligned_cols=120 Identities=13% Similarity=0.202 Sum_probs=83.5
Q ss_pred HHHHHHH-HHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 77 FIQTSII-AALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 77 ~~~l~~~-a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
..+|++. |+++||+++|+++++ +| -+++.++. .. ....++.++...+
T Consensus 133 e~em~i~~A~~~aL~~aGi~p~d--ID----~LIvs~T~-~~-------------------------~~Pslaa~l~~~L 180 (466)
T PLN00415 133 ESELVIFGALNSLFKKTGIEPRE--VG----IFIVNCSL-FN-------------------------PNPSLSSMIVNRY 180 (466)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEECcC-CC-------------------------CCchHHHHHHHHh
Confidence 4566666 666778999999888 76 23433221 00 0125677899999
Q ss_pred CCCC--ccccccc-cchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCC
Q psy5222 156 NIRG--EGFIIGG-ASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKL 232 (415)
Q Consensus 156 gl~G--p~~~v~~-~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~ 232 (415)
|++. ..+.+.. ||++++.+|..|.++++++....+||.++|.+.... + .+-|..
T Consensus 181 GLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~-~----------------------~~~dr~ 237 (466)
T PLN00415 181 KLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSM-Y----------------------RGNDRS 237 (466)
T ss_pred CCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccc-c----------------------CCCcHh
Confidence 9972 5677887 999999999999999999999999999999421110 0 000110
Q ss_pred C--CCccccceEEEEEeCChh
Q psy5222 233 A--EGFIYGQASAALLIEGNK 251 (415)
Q Consensus 233 ~--~G~~~geGa~alvL~~~~ 251 (415)
. ...++||||+|+||++..
T Consensus 238 ~lv~n~LFgDGAAAvlLs~~~ 258 (466)
T PLN00415 238 MLVPNCLFRVGGAAVMLSNRS 258 (466)
T ss_pred HhccceeecccceEEEEecCc
Confidence 0 125689999999999753
|
|
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.7e-07 Score=69.55 Aligned_cols=63 Identities=19% Similarity=0.205 Sum_probs=46.4
Q ss_pred cccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCccccceE
Q psy5222 163 IIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYGQAS 242 (415)
Q Consensus 163 ~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~geGa 242 (415)
-|..+|++++.||..|..+|++|.++.+||++.|.... ...+.+ ....+++||||
T Consensus 2 Di~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~------------------------~~~~~~-~~~~~~~gDgA 56 (80)
T PF08545_consen 2 DINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR------------------------IVDRTD-RQTAFIFGDGA 56 (80)
T ss_dssp EEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG------------------------GSHTTH-HHHHTTB-EEE
T ss_pred cccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc------------------------cccccc-cCcceeecchh
Confidence 47789999999999999999999999999999994111 001111 12345799999
Q ss_pred EEEEeCCh
Q psy5222 243 AALLIEGN 250 (415)
Q Consensus 243 ~alvL~~~ 250 (415)
+++||++.
T Consensus 57 aA~vl~~~ 64 (80)
T PF08545_consen 57 AAVVLSRD 64 (80)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEec
Confidence 99999986
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=98.28 E-value=4e-06 Score=76.25 Aligned_cols=124 Identities=13% Similarity=0.112 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
-...+...++.++|+++|+.+++ +| .+++.++.... ...++..|...+
T Consensus 82 Eae~v~f~av~~LL~ktgv~p~d--Id----iLVvncs~f~p--------------------------tPSLsamIvnr~ 129 (290)
T PF08392_consen 82 EAEMVIFGAVDDLLAKTGVKPSD--ID----ILVVNCSLFNP--------------------------TPSLSAMIVNRY 129 (290)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEECcCCCc--------------------------CCcHHHHHHHHh
Confidence 34567888999999999999988 76 45555332111 126678999999
Q ss_pred CCCCcc--ccc-cccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCC
Q psy5222 156 NIRGEG--FII-GGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKL 232 (415)
Q Consensus 156 gl~Gp~--~~v-~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~ 232 (415)
|++.-. +.+ ..||++|+.+|.+|.++++...-..+||.++|. ++...+.+-+....+
T Consensus 130 ~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~-~s~~~Y~G~~rsmlv------------------- 189 (290)
T PF08392_consen 130 GMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTEN-ISANWYRGNDRSMLV------------------- 189 (290)
T ss_pred CCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEee-cccccccCCcHHHhh-------------------
Confidence 998744 443 359999999999999999999999999999994 333322222221111
Q ss_pred CCCccccceEEEEEeCChhh
Q psy5222 233 AEGFIYGQASAALLIEGNKN 252 (415)
Q Consensus 233 ~~G~~~geGa~alvL~~~~~ 252 (415)
...+|.+|++|++|.+...
T Consensus 190 -~NcLFr~GgAAvLLSn~~~ 208 (290)
T PF08392_consen 190 -SNCLFRMGGAAVLLSNKPS 208 (290)
T ss_pred -ccccccCCceeEEeecCcc
Confidence 2345889999999997665
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.4e-05 Score=72.42 Aligned_cols=226 Identities=14% Similarity=0.075 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..+|..+|+..||+++++.+++ ++ +++++.--.+ ...+++.+..|+
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~d--Id-----~~~aGDLlnQ---------------------------~i~s~f~ar~l~ 96 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKED--ID-----YLFAGDLLNQ---------------------------IISSSFAARDLG 96 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG---S-----EEEEEETTCC---------------------------CCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--Ce-----EEEehhhhhh---------------------------hHHHHHHHHhcC
Confidence 4488999999999999999888 66 6665321000 234556777777
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCc
Q psy5222 157 IRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGF 236 (415)
Q Consensus 157 l~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~ 236 (415)
+ |-+-+.++|++...+|.+|..+|..|-+|.+|++......+.+.-..|.. ..+.-||-.. .
T Consensus 97 i--Pf~GlygACST~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQfR~P~------------EyG~Qrp~tA----q 158 (329)
T PF07451_consen 97 I--PFLGLYGACSTMMESLALAAMLVDGGFADYVLAATSSHFATAERQFRFPT------------EYGGQRPPTA----Q 158 (329)
T ss_dssp ----EEEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT---G------------GGT----TT------
T ss_pred C--CccchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeccccchhhhhccCch------------hccCCCCCcc----c
Confidence 6 88889999999999999999999999999999998875444333222110 0112233221 1
Q ss_pred cccceEEEEEeCChhhHHhcCCeeEEEEEeEEe--ccCCCCCCCCC------HHHHHHHHHHHHHHcCCCCCcccEEEec
Q psy5222 237 IYGQASAALLIEGNKNIKILNKSYLARLLGGVI--NLHATASPEPN------LNNEISVMNSVLKQSGLKKNMIDYLNTH 308 (415)
Q Consensus 237 ~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~--~~~~~~~~~~~------~~~~~~~~~~aL~~Agl~~~dId~v~~h 308 (415)
.---|++++||.+... .|+ |.+.-. -.| ....+|+ .++....|.+-|++-|.+|+|-|.|..-
T Consensus 159 wTVTGaGa~il~~~~~------~p~--It~~T~GkVvD-~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTG 229 (329)
T PF07451_consen 159 WTVTGAGAAILSKEGS------GPR--ITHATIGKVVD-MGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTG 229 (329)
T ss_dssp EE--EEEEEEEESS--------SEE--EEEEE----B--SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEES
T ss_pred EEEeceEEEEEecCCC------CcE--EEEEEEEEEEE-cCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEec
Confidence 2335788999986532 222 333221 111 0112232 2334566778889999999999999977
Q ss_pred CCCCCCCCHHHHHHHHHHHhcCCCce---eeeec------c-ccc---chhHhhHHHHHHHHHHHHhhcCccC
Q psy5222 309 GSSSPLGDKIEISAIKEVYKNHFSKL---LLNST------K-SLT---GHCLYSSGIVEIIASVIQMRKKFIH 368 (415)
Q Consensus 309 ~~gt~~~d~~E~~al~~~~~~~~~~~---~v~~~------k-~~~---Gh~~~asg~~~l~~~~~~l~~~~ip 368 (415)
+-|. +-..-+.+++.+++-.+ ..... . -.+ |---|+|..+-.-..+..|++|.+-
T Consensus 230 DLg~-----vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA~V~~g~ll~~l~~g~~k 297 (329)
T PF07451_consen 230 DLGK-----VGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSAVVLCGYLLPKLRKGELK 297 (329)
T ss_dssp S-HH-----HHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHHHHHHHCHHHHHHTTS-S
T ss_pred chHH-----HHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHHHHHHHHHHHHHHcCCce
Confidence 6554 34555666665543111 11111 1 111 3444666666666677788887653
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=98.10 E-value=6.3e-06 Score=72.87 Aligned_cols=95 Identities=15% Similarity=0.078 Sum_probs=67.5
Q ss_pred cCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHH
Q psy5222 73 KSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMS 152 (415)
Q Consensus 73 ~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 152 (415)
...-...|+.+|+++||+++|+++++ |+ -+|+-+..|.. ...+-.++.
T Consensus 96 ~~~~a~~L~~~Aa~~AL~~~g~~~~d--It----hlv~vs~TG~~--------------------------~PglD~~l~ 143 (226)
T PF00195_consen 96 YAEEAPPLAEEAARKALAEAGLDPSD--IT----HLVTVSCTGIA--------------------------APGLDARLI 143 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTS-GGG--EC----EEEEEESSSSE--------------------------CS-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcc--cc----eEEEEecCCcC--------------------------CCchhHHHH
Confidence 33445689999999999999998888 66 45554433311 123445889
Q ss_pred HHhCCCCcc---ccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCC
Q psy5222 153 EIFNIRGEG---FIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDL 199 (415)
Q Consensus 153 ~~lgl~Gp~---~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~ 199 (415)
..|||+..+ .....||.+|..+|..|.+..++..-..|||..+|.+.
T Consensus 144 ~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElcs 193 (226)
T PF00195_consen 144 NRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVELCS 193 (226)
T ss_dssp HHHT--TTSEEEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGG
T ss_pred hcCCCCCCcEEEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEEeeE
Confidence 999996533 33557999999999999999999999999999999543
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00014 Score=61.18 Aligned_cols=89 Identities=11% Similarity=0.219 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEE-EecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLI-IAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
..-|++.|++.+|++.++++++ ||.+ +|+-.+.... -.+++++...|
T Consensus 53 ~vTmA~nAa~~ll~~~~id~~~-------Ig~l~vgTES~vD~s-------------------------Ks~~t~v~~ll 100 (174)
T PF01154_consen 53 IVTMAANAAKPLLDRYNIDPDD-------IGRLIVGTESGVDKS-------------------------KSISTYVHQLL 100 (174)
T ss_dssp HHHHHHHHHHTTHHHHT-HHHH-------EEEEEEE-SS-SBSS-------------------------S-HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHH-------ccEEEEecccccccc-------------------------ccHHHHHHHHh
Confidence 4578999999999998765544 4554 4543322211 14667889999
Q ss_pred CCCCc----cccccccchhHHHHHHHHHHHHHcCCCC--eEEEeecCC
Q psy5222 156 NIRGE----GFIIGGASASGNIGIIHGMRLIQNNIVD--ACLIISAMT 197 (415)
Q Consensus 156 gl~Gp----~~~v~~~cas~l~Al~~A~~~I~~G~~d--~vlvgg~e~ 197 (415)
|+.+. ++-+-.+|-+|..||..|..||+++..| .+||++.|.
T Consensus 101 ~~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDi 148 (174)
T PF01154_consen 101 GLSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDI 148 (174)
T ss_dssp TTTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEE
T ss_pred CcCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccc
Confidence 99542 2446789999999999999999998765 899999994
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00069 Score=51.30 Aligned_cols=89 Identities=17% Similarity=0.139 Sum_probs=57.0
Q ss_pred HHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCC
Q psy5222 292 LKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNL 371 (415)
Q Consensus 292 L~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~ 371 (415)
|+++|++++|||++..|-.+. .-...+.+.++-+.+..+ ... ..+||+.+|+-.+.+.. .++++.+
T Consensus 1 L~~~g~~~~did~~i~hq~~~-----~~~~~~~~~lgi~~~~~~-~~~-~~~Gn~~sa~~~~~L~~---~~~~g~~---- 66 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASK-----KILDSIAKRLGIPPERFP-DNL-AEYGNTGSASIPINLAD---ALEEGRI---- 66 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSH-----HHHHHHHHHHTS-GGGBE--TH-HHH-B-GGGHHHHHHHH---HHHTTSS----
T ss_pred CccccCCHHHCCEEEeCCCCH-----HHHHHHHHHcCCcHHHHH-HHH-hccCcchhhhHHHHHHH---HHHcCCC----
Confidence 689999999999999994443 334445566654332333 222 67799999987766644 4444433
Q ss_pred CCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 372 NLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 372 ~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+.+++++.++|.|.+.++++++
T Consensus 67 -------------------~~Gd~vl~~~~G~G~~~~~~~~~ 89 (90)
T PF08541_consen 67 -------------------KPGDRVLLVGFGAGFSWGAAVLR 89 (90)
T ss_dssp -------------------CTTEEEEEEEEETTTEEEEEEEE
T ss_pred -------------------CCCCEEEEEEEEhhheeEEEEEE
Confidence 12578899999999999999986
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=90.36 E-value=1.7 Score=42.43 Aligned_cols=98 Identities=11% Similarity=0.100 Sum_probs=57.5
Q ss_pred EEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHH-HHHHHHHHHhcCCCceeeeecc
Q psy5222 262 ARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKI-EISAIKEVYKNHFSKLLLNSTK 340 (415)
Q Consensus 262 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~-E~~al~~~~~~~~~~~~v~~~k 340 (415)
+.|.|++...-+.+......+-..+++++||+++|++++|||.+.+..+........ -...+...++.. ..+....
T Consensus 11 vaIvG~g~t~~~~~~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~--~~~~~~V- 87 (392)
T PRK06065 11 VAVIGAGLTLFRRRLLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI--RKPVSRV- 87 (392)
T ss_pred eEEEEecccCCcCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC--CCCeEEE-
Confidence 468888877655543222244458899999999999999999887642211111111 111122222221 1122111
Q ss_pred cccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 341 SLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 341 ~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
+..+++|...+..+..+++.|.
T Consensus 88 ----~~~gasG~~al~~A~~~I~sG~ 109 (392)
T PRK06065 88 ----YVGGATGVMTAIAGWYHVASGL 109 (392)
T ss_pred ----ecCchhHHHHHHHHHHHHhCCC
Confidence 3347888888888999998875
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=90.18 E-value=1.5 Score=42.79 Aligned_cols=98 Identities=10% Similarity=0.100 Sum_probs=58.9
Q ss_pred EEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCC-HHHHHHHHHHHhcCCCceeeeecc
Q psy5222 262 ARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGD-KIEISAIKEVYKNHFSKLLLNSTK 340 (415)
Q Consensus 262 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d-~~E~~al~~~~~~~~~~~~v~~~k 340 (415)
+.|.|++....+.+......+-..++++++|+++|++++|||.+.+. +..+..+ ......+...++-.. .+++.
T Consensus 3 v~IvG~g~t~~~~~~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~-~~~~~--- 77 (385)
T PRK12578 3 VAVIGVGNSKFGRRDDVSVQELAWESIKEALNDAGVSQTDIELVVVG-STAYRGIELYPAPIVAEYSGLTG-KVPLR--- 77 (385)
T ss_pred eEEEeecccceeecCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccccccCChHHHHHHHhCCCC-CCeeE---
Confidence 35778776654444322223445789999999999999999988754 3222111 112233444444321 11111
Q ss_pred cccchhHhhHHHHHHHHHHHHhhcCcc
Q psy5222 341 SLTGHCLYSSGIVEIIASVIQMRKKFI 367 (415)
Q Consensus 341 ~~~Gh~~~asg~~~l~~~~~~l~~~~i 367 (415)
=+..+++|+..+..+...++.|..
T Consensus 78 ---v~~~casg~~al~~A~~~I~sG~~ 101 (385)
T PRK12578 78 ---VEAMCATGLAASLTAYTAVASGLV 101 (385)
T ss_pred ---EeccCHHHHHHHHHHHHHHHCCCC
Confidence 135678888889899999988753
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=87.21 E-value=3 Score=40.67 Aligned_cols=94 Identities=12% Similarity=0.029 Sum_probs=57.3
Q ss_pred EEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeeccc
Q psy5222 262 ARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKS 341 (415)
Q Consensus 262 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~ 341 (415)
+.|.|++....+.+......+-..+++++||++||++++|||.+.+..... .. ....+.+.++-. ..++
T Consensus 10 vaIvG~g~t~~~~~~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~-~~---~~~~la~~lGl~--~~~~----- 78 (384)
T PRK06158 10 TAIVGAATAGLGEAPGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDD-AL---WGLSVAEYLGIR--PRFV----- 78 (384)
T ss_pred EEEEEeeeccceeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC-CC---cHHHHHHHcCCC--Ceee-----
Confidence 568888876554432222234558899999999999999999887642211 11 112344444432 1222
Q ss_pred ccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 342 LTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 342 ~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
..-+..++++...+..+...++.|.
T Consensus 79 ~~~~~g~~s~~~al~~A~~~I~sG~ 103 (384)
T PRK06158 79 DGTMIGGSSFLAHLLPAALALEAGL 103 (384)
T ss_pred ccccCccHHHHHHHHHHHHHHHcCC
Confidence 1124457777777888888888775
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=87.16 E-value=3.2 Score=40.71 Aligned_cols=97 Identities=10% Similarity=0.070 Sum_probs=57.1
Q ss_pred EEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCC-CCCHHHHHHHHHHHhcCCCceeeeecc
Q psy5222 262 ARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSP-LGDKIEISAIKEVYKNHFSKLLLNSTK 340 (415)
Q Consensus 262 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~-~~d~~E~~al~~~~~~~~~~~~v~~~k 340 (415)
+.|.|++.+--+........+-..++++++|+++|++++|||.+.. ++... .........+...++-. ..+
T Consensus 9 v~IvG~g~tp~~~~~~~~~~~L~~ea~~~AL~dagl~~~dID~v~v-g~~~~~~~~~~~~~~~a~~lGl~--~~~----- 80 (398)
T PRK06157 9 VAILGMGCTKFGERWDAGAEDLMVEAFLEALADAGIEPKDIDAAWF-GTHYDEIGSGKSGTPLSRALRLP--NIP----- 80 (398)
T ss_pred eEEEEeccccccccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeccccccccchhHHHHHHcCCC--CCC-----
Confidence 4577777654443322222455689999999999999999998754 22111 00111112233333321 111
Q ss_pred cccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 341 SLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 341 ~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
...=+..++||+..+..+..+++.|.
T Consensus 81 ~~~v~~~c~sg~~ai~~A~~~I~sG~ 106 (398)
T PRK06157 81 VTRVENFCATGSEAFRGAVYAVASGA 106 (398)
T ss_pred EEEEecccHHHHHHHHHHHHHHHCCC
Confidence 11125568899999999999998875
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.76 E-value=4.8 Score=39.43 Aligned_cols=98 Identities=11% Similarity=0.085 Sum_probs=56.0
Q ss_pred EEEEeEEeccCCCCC----CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCC-ceee
Q psy5222 262 ARLLGGVINLHATAS----PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFS-KLLL 336 (415)
Q Consensus 262 a~i~g~~~~~~~~~~----~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~-~~~v 336 (415)
+.|.|.+.+--+... .....+-..++++++|+++|++++|||.+..- +..+.+.. -..+....++.... .+|.
T Consensus 9 V~Ivg~~rTpf~k~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G-~~~~~~~~-~~~~~~~~l~ag~~~~~p~ 86 (397)
T PRK06954 9 IVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMG-CVLPAGQG-QAPARQAALGAGLPLSVGC 86 (397)
T ss_pred EEEEecccCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEE-ecCCCccc-hHHHHHHHHcCCCCCCccE
Confidence 456777655444321 11124445899999999999999999987642 22222221 11111122222211 1222
Q ss_pred eecccccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 337 NSTKSLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 337 ~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
..+ +..++||+..+..+..+++.|.
T Consensus 87 ~~V-----~~aCaSG~~Av~~A~~~I~sG~ 111 (397)
T PRK06954 87 TTV-----NKMCGSGMRAAMFAHDMLVAGS 111 (397)
T ss_pred eec-----cccchHHHHHHHHHHHHHHCCC
Confidence 222 4458899999999999998776
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.18 E-value=6 Score=38.62 Aligned_cols=94 Identities=14% Similarity=0.058 Sum_probs=58.3
Q ss_pred EEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeeccc
Q psy5222 262 ARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKS 341 (415)
Q Consensus 262 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~ 341 (415)
+.|.|++.+-.+.+......+-..+++++||++|||+++|||.+...+... .. ....+...++-. +.++..
T Consensus 7 vaIvG~g~t~~~~~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~--~~--~~~~~~~~lGl~--~~~~~~--- 77 (388)
T PRK08142 7 AYIVGAYEHPTRKAPDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAP--GL--GPASMVDYLGLK--LRHVDS--- 77 (388)
T ss_pred EEEEEEeeccceeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCC--Cc--cHHHHHHhCCCC--Ceeecc---
Confidence 458888887665543222245568999999999999999999876532111 11 111233334432 222221
Q ss_pred ccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 342 LTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 342 ~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
.+..|++|...+..+..+++.|.
T Consensus 78 --v~~gg~s~~~a~~~A~~~I~sG~ 100 (388)
T PRK08142 78 --TETGGSSYLAHVGHAAQAIAAGK 100 (388)
T ss_pred --ccCCcHHHHHHHHHHHHHHHcCC
Confidence 24457888888888889998885
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=84.20 E-value=6.8 Score=38.40 Aligned_cols=97 Identities=8% Similarity=0.069 Sum_probs=57.6
Q ss_pred EEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCC-CCCHHHHHHHHHHHhcCCCceeeeecc
Q psy5222 262 ARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSP-LGDKIEISAIKEVYKNHFSKLLLNSTK 340 (415)
Q Consensus 262 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~-~~d~~E~~al~~~~~~~~~~~~v~~~k 340 (415)
+.|.|++.+.-+.+. ....+-..+++++||+++|++++|||.+....+... .........+...++-. ..+..
T Consensus 6 v~Ivg~~~t~~~r~~-~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~--~~~~~--- 79 (399)
T PRK06059 6 VYILGAGMHPWGKWG-RDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN--GAPVS--- 79 (399)
T ss_pred EEEEEecccccCCCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC--CCcee---
Confidence 457777766544421 122444578999999999999999999874321111 11112223344444432 22221
Q ss_pred cccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 341 SLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 341 ~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
.=+..+++|+..+..+...++.|.
T Consensus 80 --~v~~~Casg~~al~~A~~~I~sG~ 103 (399)
T PRK06059 80 --SSYAACASGSQALQSARAQILAGL 103 (399)
T ss_pred --cccchhHHHHHHHHHHHHHHHCCC
Confidence 124567788888888888888775
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.76 E-value=5.9 Score=38.66 Aligned_cols=98 Identities=13% Similarity=0.029 Sum_probs=54.2
Q ss_pred EEEEeEEeccC-CCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCC-HHHHHHHHHHHhcCCCceeeeec
Q psy5222 262 ARLLGGVINLH-ATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGD-KIEISAIKEVYKNHFSKLLLNST 339 (415)
Q Consensus 262 a~i~g~~~~~~-~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d-~~E~~al~~~~~~~~~~~~v~~~ 339 (415)
+.|.|++.... +.+......+-..+++++||++||++++|||.+....+.....+ ..-...+...++-. +.+...
T Consensus 5 v~IvG~g~t~~~~~~~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~--~~~~~~- 81 (386)
T PRK08313 5 AAVLGTGQTKYVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT--GKPLIR- 81 (386)
T ss_pred EEEEEeecCCcCccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC--CCceEE-
Confidence 45888887654 43322112455588999999999999999998764321110000 00011233333322 112111
Q ss_pred ccccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 340 KSLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 340 k~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
=+..+++|...+..+...++.|.
T Consensus 82 ----v~~~casg~~al~~A~~~I~sG~ 104 (386)
T PRK08313 82 ----VHTAGSVGGSTAVVAASLVQSGV 104 (386)
T ss_pred ----EeccCHHHHHHHHHHHHHHHCCC
Confidence 13346667777777888888764
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.17 E-value=8.5 Score=38.18 Aligned_cols=97 Identities=11% Similarity=-0.019 Sum_probs=57.8
Q ss_pred EEEEeEEeccCCCCCCCCC-HHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH--HHHHHHHHHHhcCCCceeeee
Q psy5222 262 ARLLGGVINLHATASPEPN-LNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK--IEISAIKEVYKNHFSKLLLNS 338 (415)
Q Consensus 262 a~i~g~~~~~~~~~~~~~~-~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~--~E~~al~~~~~~~~~~~~v~~ 338 (415)
+.|.|++.+--+.+....+ .+-..+++++||+++|++++|||.+.+. +.....+. .-...+....+-. ..+
T Consensus 18 VaIvG~g~Tpfgr~~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~-~~~~~~~g~~~~~~~~~~~lGl~--~~~--- 91 (430)
T PRK06365 18 VYMVAAGVTKFDKASPYMDFRERVKKAFDYAMNDAGLTLADIDGSVAS-YFSDHFQRQLLAGIMVQDYLGLV--PKP--- 91 (430)
T ss_pred EEEEEeeecCccccCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEe-cccccccccchhhHHHHHhcCCC--CCc---
Confidence 5678888766554322223 3445889999999999999999987653 22111111 0111122222221 122
Q ss_pred cccccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 339 TKSLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 339 ~k~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
.+.-+..++||...+..+...++.|.
T Consensus 92 --~~~v~~~~aSg~~ai~~A~~~I~sG~ 117 (430)
T PRK06365 92 --SKRIEGGGATGGLAFQAGYEEIASGR 117 (430)
T ss_pred --eEEEeCCcHHHHHHHHHHHHHHHcCC
Confidence 11224468899999999999998885
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=82.01 E-value=9.4 Score=37.36 Aligned_cols=99 Identities=11% Similarity=0.024 Sum_probs=55.3
Q ss_pred EEEEeEEeccCCCCC----CCCCHHHHHHHHHHHHHHcCCCCCcccEEEec-CCCCCCCCHHHHHHHHHHHhcCCCceee
Q psy5222 262 ARLLGGVINLHATAS----PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTH-GSSSPLGDKIEISAIKEVYKNHFSKLLL 336 (415)
Q Consensus 262 a~i~g~~~~~~~~~~----~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h-~~gt~~~d~~E~~al~~~~~~~~~~~~v 336 (415)
+.|.|.+.+--+... .....+-..++++++|+++|++++|||.+.+. .+.....+......+....+-. ...|.
T Consensus 5 v~Ivg~~rtp~g~~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~-~~~p~ 83 (394)
T PRK09051 5 VVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVP-QETPA 83 (394)
T ss_pred EEEEecccCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCC-CCCce
Confidence 456666554443321 11123445789999999999999999987643 2221111222222222222321 01232
Q ss_pred eecccccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 337 NSTKSLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 337 ~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
..+ +..++||+..+..+...++.|.
T Consensus 84 ~~V-----~~aCaSg~~Al~~A~~~I~sG~ 108 (394)
T PRK09051 84 FNV-----NRLCGSGLQAIVSAAQAILLGD 108 (394)
T ss_pred EEe-----cccchHHHHHHHHHHHHHHcCC
Confidence 222 3457888888888888888765
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=81.55 E-value=4.2 Score=38.59 Aligned_cols=78 Identities=12% Similarity=0.057 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHH
Q psy5222 281 LNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVI 360 (415)
Q Consensus 281 ~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~ 360 (415)
.+-..++++++|+++|++++|||++... +.++..-......+...++.. +.+..... ..+++|+..+..+..
T Consensus 52 ~~la~~A~~~aL~~ag~~~~dId~vi~~-s~~~~~~~~~~~~v~~~Lg~~--~~~~~~v~-----~~Casg~~al~~A~~ 123 (326)
T CHL00203 52 TKLAAEAANKALDKAHMDPLEIDLIILA-TSTPDDLFGSASQLQAEIGAT--RAVAFDIT-----AACSGFILALVTATQ 123 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCCCCchHHHHHHHhCCC--CCceeeec-----ccchhHHHHHHHHHH
Confidence 3445789999999999999999998754 333221111223344555533 22221111 135666777777777
Q ss_pred HhhcCc
Q psy5222 361 QMRKKF 366 (415)
Q Consensus 361 ~l~~~~ 366 (415)
.++.+.
T Consensus 124 ~i~sg~ 129 (326)
T CHL00203 124 FIQNGS 129 (326)
T ss_pred HHHcCC
Confidence 777664
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=81.52 E-value=4.9 Score=37.92 Aligned_cols=72 Identities=17% Similarity=0.168 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccch-hHhhHHHHHHHHHHH
Q psy5222 282 NNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGH-CLYSSGIVEIIASVI 360 (415)
Q Consensus 282 ~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh-~~~asg~~~l~~~~~ 360 (415)
+-..+++++||++||++++|||++.....-. -..-...+.+.++ +| .++- .-+++++..+..+..
T Consensus 58 eLa~eAa~~ALekAGI~~~DID~lI~Gdll~---Q~~sAs~vA~~LG-----IP------a~dV~gACST~~~AL~lAa~ 123 (337)
T PRK08304 58 KMMEDAIQQALQKANLKKSDIDYLLAGDLLN---QIISANFAARELG-----IP------FLGLYGACSTMMESLALGSM 123 (337)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCCC---CcchHHHHHHHhC-----Cc------EEEEeccCHHHHHHHHHHHH
Confidence 4458999999999999999999998775421 1122222222232 22 2222 234555666777777
Q ss_pred HhhcCcc
Q psy5222 361 QMRKKFI 367 (415)
Q Consensus 361 ~l~~~~i 367 (415)
.++.|..
T Consensus 124 lI~SG~a 130 (337)
T PRK08304 124 LIDGGFA 130 (337)
T ss_pred HHhcCCC
Confidence 7776653
|
|
| >KOG1393|consensus | Back alignment and domain information |
|---|
Probab=81.52 E-value=13 Score=35.39 Aligned_cols=114 Identities=18% Similarity=0.257 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|.+.+..+.+++..++++. +.+ +-||+-.- .+-. -.+=+.+.+.|+
T Consensus 60 i~Sl~ltvvs~Lmery~i~~~~--IGR----LEVGTETi-iDKS------------------------KSVKt~LMqLF~ 108 (462)
T KOG1393|consen 60 IISLSLTVVSRLMERYNIDPDS--IGR----LEVGTETI-IDKS------------------------KSVKTVLMQLFE 108 (462)
T ss_pred hhhhhHHHHHHHHHHhCCChhh--cce----EEecceec-cccc------------------------hHHHHHHHHHhh
Confidence 4467888999999999988777 543 44452211 1100 012234445554
Q ss_pred CCC----ccccccccchhHHHHHHHHHHHHHcCCC--CeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCC
Q psy5222 157 IRG----EGFIIGGASASGNIGIIHGMRLIQNNIV--DACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFD 230 (415)
Q Consensus 157 l~G----p~~~v~~~cas~l~Al~~A~~~I~~G~~--d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd 230 (415)
-.| ..+-..++|-+|..||..|.+||.+..= ..+||...|. ++- +++.+||-.
T Consensus 109 ~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDI--------------AvY-------~~G~aRpTG 167 (462)
T KOG1393|consen 109 ESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDI--------------AVY-------AKGNARPTG 167 (462)
T ss_pred hcCCCccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeE--------------EEe-------cCCCCCCCC
Confidence 211 4455678999999999999999997433 3556665563 221 556677732
Q ss_pred CCCCCccccceEEEEEeCCh
Q psy5222 231 KLAEGFIYGQASAALLIEGN 250 (415)
Q Consensus 231 ~~~~G~~~geGa~alvL~~~ 250 (415)
|-||+|+++...
T Consensus 168 --------GAgAVAmLIgPn 179 (462)
T KOG1393|consen 168 --------GAGAVAMLIGPN 179 (462)
T ss_pred --------CcceEEEEEcCC
Confidence 457888888753
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=81.41 E-value=7.8 Score=37.84 Aligned_cols=94 Identities=14% Similarity=0.076 Sum_probs=55.7
Q ss_pred EEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeeccc
Q psy5222 262 ARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKS 341 (415)
Q Consensus 262 a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~ 341 (415)
+.|.|++.+..+.+......+-..+++++||++|||+++|||.+...... ... . ..+...++-.. ..++..
T Consensus 6 v~IvG~g~t~~~r~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~--~-~~l~~~lGl~~-~~~~~~--- 76 (386)
T PRK07855 6 AAIVGIGATEFSKNSGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNP--E-IAVARALGIGE-LKFFSR--- 76 (386)
T ss_pred EEEEEeeecccccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--ccc--H-HHHHHHCCCCC-Ccceee---
Confidence 46888888654444221123445899999999999999999987652211 111 1 22333344221 011111
Q ss_pred ccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 342 LTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 342 ~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
=+..|++|...+..+...++.|.
T Consensus 77 --v~~gg~sg~~~~~~A~~~I~sG~ 99 (386)
T PRK07855 77 --IHYGGGAACATVQQAAMAVATGV 99 (386)
T ss_pred --ecCCcHHHHHHHHHHHHHHHCCC
Confidence 13457777777888888888775
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=81.04 E-value=11 Score=33.86 Aligned_cols=79 Identities=9% Similarity=-0.015 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHH
Q psy5222 282 NNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQ 361 (415)
Q Consensus 282 ~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~ 361 (415)
+-..++++++|+++|++++|||.+....+........-...+...++-+ +.+ ...=....++++..+..+...
T Consensus 9 ~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~--~~~-----~~~i~~~C~s~~~al~~A~~~ 81 (254)
T cd00327 9 ELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS--GGP-----AYSVNQACATGLTALALAVQQ 81 (254)
T ss_pred HHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC--CCC-----cceeccHhHHHHHHHHHHHHH
Confidence 3457899999999999999999887654432211122233345555531 111 111124556677777777788
Q ss_pred hhcCcc
Q psy5222 362 MRKKFI 367 (415)
Q Consensus 362 l~~~~i 367 (415)
|+.+..
T Consensus 82 i~~g~~ 87 (254)
T cd00327 82 VQNGKA 87 (254)
T ss_pred HHCCCC
Confidence 887643
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=80.76 E-value=9.7 Score=38.02 Aligned_cols=98 Identities=12% Similarity=0.115 Sum_probs=55.6
Q ss_pred EEEEeEEeccCCCC-CC---CCC-HHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCC--HHHHHHHHHHHhcCCCce
Q psy5222 262 ARLLGGVINLHATA-SP---EPN-LNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGD--KIEISAIKEVYKNHFSKL 334 (415)
Q Consensus 262 a~i~g~~~~~~~~~-~~---~~~-~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d--~~E~~al~~~~~~~~~~~ 334 (415)
+.|.|.+.+--+.. .. ..+ .+-..++++++|+++|++++|||.+.. |+.++... ......+....+-.. .+
T Consensus 48 V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~-G~~~~~~~~~~~~~r~~a~~~Gl~~-~~ 125 (452)
T PLN02287 48 VVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVV-GTVLAPGSQRANECRMAAFYAGFPE-TV 125 (452)
T ss_pred EEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeecCcccccchHHHHHHHHCCCCC-Cc
Confidence 45778776554432 11 112 344588999999999999999998764 33222111 111111222222210 12
Q ss_pred eeeecccccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 335 LLNSTKSLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 335 ~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
|.... +..++||+..+..+..+++.|.
T Consensus 126 pa~~V-----~~~CaSG~~Ai~~Aa~~I~sG~ 152 (452)
T PLN02287 126 PVRTV-----NRQCSSGLQAVADVAAAIKAGF 152 (452)
T ss_pred ceEEE-----eccCchHHHHHHHHHHHHHcCC
Confidence 22222 4568888988988888888764
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.74 E-value=12 Score=36.77 Aligned_cols=98 Identities=13% Similarity=0.062 Sum_probs=55.3
Q ss_pred EEEEeEEeccCCCCC----CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCC-HHHHHHHHHHHhcCCCceee
Q psy5222 262 ARLLGGVINLHATAS----PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGD-KIEISAIKEVYKNHFSKLLL 336 (415)
Q Consensus 262 a~i~g~~~~~~~~~~----~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d-~~E~~al~~~~~~~~~~~~v 336 (415)
+.|.|.+.+--+... .....+-..++++++|+++|++++|||.+... +.++... ..-...+....+-.. .+|.
T Consensus 4 v~Ivg~~rTpfgk~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g-~~~~~~~~~~~a~~va~~~Gl~~-~~p~ 81 (404)
T PRK06205 4 AVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFG-QGYPNGEAPAIGRVAALDAGLPV-TVPG 81 (404)
T ss_pred eEEEEeecCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCCChHHHHHHHHcCCCC-CCce
Confidence 456666665544432 11124445889999999999999999987643 2222111 111111222223110 1222
Q ss_pred eecccccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 337 NSTKSLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 337 ~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
.. =+..++||+..+..+...++.|.
T Consensus 82 ~~-----V~~~CaSg~~Al~~A~~~I~sG~ 106 (404)
T PRK06205 82 MQ-----LDRRCGSGLQAVITAAMQVQTGA 106 (404)
T ss_pred ee-----hhhhhhHHHHHHHHHHHHHHcCC
Confidence 11 14568888989989999988775
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.30 E-value=12 Score=37.05 Aligned_cols=98 Identities=9% Similarity=0.015 Sum_probs=56.0
Q ss_pred EEEEeEEeccCCCCCC----CCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH-HHHHHHHHHHhcCCCceee
Q psy5222 262 ARLLGGVINLHATASP----EPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK-IEISAIKEVYKNHFSKLLL 336 (415)
Q Consensus 262 a~i~g~~~~~~~~~~~----~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~-~E~~al~~~~~~~~~~~~v 336 (415)
+.|.|.+.+--+.+.. ....+-..++++++|+++|++++|||.+... +.++..+. .....+...++-.. ..|.
T Consensus 5 v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~-~~p~ 82 (426)
T PRK08170 5 VYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILG-CAMPSPDEANIARVVALRLGCGE-KVPA 82 (426)
T ss_pred EEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCcChHHHHHHHHhCcCC-Ccee
Confidence 4567776654444221 1123445789999999999999999987643 22222221 11222333333211 1222
Q ss_pred eecccccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 337 NSTKSLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 337 ~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
... +..++||+..+..+..+++.|.
T Consensus 83 ~~v-----~~~CaSg~~al~~A~~~I~sG~ 107 (426)
T PRK08170 83 WTV-----QRNCASGMQALDSAAANIALGR 107 (426)
T ss_pred eec-----cchhhHHHHHHHHHHHHHHCCC
Confidence 222 1238888888988989998775
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=80.28 E-value=11 Score=36.28 Aligned_cols=45 Identities=13% Similarity=0.220 Sum_probs=34.1
Q ss_pred EEEEeEEeccCCCCC-CCCC-HHHHHHHHHHHHHHcCCCCCcccEEE
Q psy5222 262 ARLLGGVINLHATAS-PEPN-LNNEISVMNSVLKQSGLKKNMIDYLN 306 (415)
Q Consensus 262 a~i~g~~~~~~~~~~-~~~~-~~~~~~~~~~aL~~Agl~~~dId~v~ 306 (415)
+.|.|++...-+.+. .... .+-..+++++||++||++++|||.+.
T Consensus 4 vaIvG~g~t~~~~~~~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~ 50 (352)
T PRK07937 4 VAVVGFAQAPHVRRTDGTTNGVEMLMPCFAELYAELGITKSDIGFWC 50 (352)
T ss_pred EEEEEeeccccccCCCCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 458888877655543 2223 45668999999999999999999884
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 415 | ||||
| 1j3n_A | 408 | Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei | 1e-27 | ||
| 1e5m_A | 416 | Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas | 2e-22 | ||
| 2wgf_A | 416 | Crystal Structure Of Mycobacterium Tuberculosis C17 | 3e-20 | ||
| 2wgd_A | 416 | Crystal Structure Of Kasa Of Mycobacterium Tubercul | 3e-20 | ||
| 3o04_A | 413 | Crystal Structure Of The Beta-Keto-Acyl Carrier Pro | 8e-20 | ||
| 1w0i_A | 431 | Arabidopsis Thaliana Mitochondrial Kas Length = 431 | 2e-19 | ||
| 2c9h_A | 444 | Structure Of Mitochondrial Beta-Ketoacyl Synthase L | 3e-19 | ||
| 2iwy_A | 438 | Human Mitochondrial Beta-ketoacyl Acp Synthase Leng | 3e-19 | ||
| 2gqd_A | 437 | The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii | 4e-19 | ||
| 3hnz_A | 427 | Structure Of E. Coli Fabf(C163a) In Complex With Pl | 6e-19 | ||
| 2gfv_A | 427 | Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng | 6e-19 | ||
| 2gfy_A | 427 | Structure Of E. Coli Fabf(K335a) Mutant With Covale | 6e-19 | ||
| 1b3n_A | 412 | Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta | 6e-19 | ||
| 2gfw_A | 427 | Structure Of Wild Type E. Coli Fabf (Kasii) Length | 7e-19 | ||
| 4f32_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 2e-17 | ||
| 4ddo_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 2e-17 | ||
| 2gp6_A | 434 | X-Ray Crystal Structure Of Mycobacterium Tuberculos | 4e-17 | ||
| 1ox0_A | 430 | The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie | 7e-14 | ||
| 2rjt_A | 428 | Crystal Structure Analysis Of A Surface Entropy Red | 9e-14 | ||
| 2byw_A | 418 | Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C | 1e-13 | ||
| 1h4f_A | 406 | E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha | 1e-13 | ||
| 1fj4_A | 406 | The Structure Of Beta-Ketoacyl-[acyl Carrier Protei | 1e-13 | ||
| 1dd8_A | 406 | Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr | 1e-13 | ||
| 1f91_A | 406 | Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In | 2e-13 | ||
| 2vb7_C | 406 | Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap | 2e-13 | ||
| 1ek4_A | 418 | Beta-Ketoacyl [acyl Carrier Protein] Synthase I In | 2e-13 | ||
| 2byz_A | 418 | Structure Of E. Coli Kas I H298q Mutant In Complex | 9e-13 | ||
| 2alm_A | 431 | Crystal Structure Analysis Of A Mutant Beta-Ketoacy | 9e-13 | ||
| 3u0f_A | 411 | The Structure Of Beta-Ketoacyl Synthase From Brucel | 9e-13 | ||
| 2byy_A | 418 | E. Coli Kas I H298e Mutation Length = 418 | 1e-12 | ||
| 3lrf_A | 428 | Crystal Structure Of Beta-Ketoacyl Synthase From Br | 1e-12 | ||
| 1tqy_A | 424 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 2e-12 | ||
| 4ewg_A | 412 | Crystal Structure Of A Beta-Ketoacyl Synthase From | 3e-12 | ||
| 3oyt_A | 410 | 1.84 Angstrom Resolution Crystal Structure Of 3-Oxo | 8e-11 | ||
| 3e60_A | 424 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 3e-10 | ||
| 3kzu_A | 428 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 9e-10 | ||
| 2hg4_A | 917 | Structure Of The Ketosynthase-acyltransferase Didom | 1e-09 | ||
| 2qo3_A | 915 | Crystal Structure Of [ks3][at3] Didomain From Modul | 1e-05 | ||
| 3hhd_A | 965 | Structure Of The Human Fatty Acid Synthase Ks-Mat D | 2e-04 | ||
| 1tqy_B | 415 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 3e-04 |
| >pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408 | Back alignment and structure |
|
| >pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416 | Back alignment and structure |
|
| >pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416 | Back alignment and structure |
|
| >pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416 | Back alignment and structure |
|
| >pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413 | Back alignment and structure |
|
| >pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431 | Back alignment and structure |
|
| >pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444 | Back alignment and structure |
|
| >pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438 | Back alignment and structure |
|
| >pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437 | Back alignment and structure |
|
| >pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427 | Back alignment and structure |
|
| >pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427 | Back alignment and structure |
|
| >pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427 | Back alignment and structure |
|
| >pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412 | Back alignment and structure |
|
| >pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427 | Back alignment and structure |
|
| >pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451 | Back alignment and structure |
|
| >pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451 | Back alignment and structure |
|
| >pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434 | Back alignment and structure |
|
| >pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430 | Back alignment and structure |
|
| >pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428 | Back alignment and structure |
|
| >pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418 | Back alignment and structure |
|
| >pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406 | Back alignment and structure |
|
| >pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406 | Back alignment and structure |
|
| >pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406 | Back alignment and structure |
|
| >pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406 | Back alignment and structure |
|
| >pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406 | Back alignment and structure |
|
| >pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418 | Back alignment and structure |
|
| >pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418 | Back alignment and structure |
|
| >pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431 | Back alignment and structure |
|
| >pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411 | Back alignment and structure |
|
| >pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418 | Back alignment and structure |
|
| >pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424 | Back alignment and structure |
|
| >pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412 | Back alignment and structure |
|
| >pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410 | Back alignment and structure |
|
| >pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424 | Back alignment and structure |
|
| >pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 | Back alignment and structure |
|
| >pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 | Back alignment and structure |
|
| >pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 | Back alignment and structure |
|
| >pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416 | Back alignment and structure |
|---|
Score = 223 bits (570), Expect = 6e-69
Identities = 117/435 (26%), Positives = 203/435 (46%), Gaps = 55/435 (12%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQ---SNFSKNIIAKINNFNFKNSLNKIT 57
+G ++ IG + + L++G++GI I T+ S+ + ++ +F+ L+
Sbjct: 14 LGAITPIGNTLQDYWQGLMEGRNGIG-PI--TRFDASDQACRFGGEVKDFDATQFLD--- 67
Query: 58 DLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA----GH 113
+KE A++ F ++ A+ QA ++KL ++ + IG++I G
Sbjct: 68 -----RKE-----AKRMDRFCHFAVCASQQAINDAKLVIN--ELNADEIGVLIGTGIGGL 115
Query: 114 NTTQNYQYSLYPEFLKKPEYLSPRY---AIQFMDSNQIGIMSEIFNIRGEGFIIGGASAS 170
++ Q ++ + K P SP I M S I +G A A+
Sbjct: 116 KVLED-QQTILLD--KGPSRCSPFMIPMMIANMASGLTAIN---LGAKGPNNCTVTACAA 169
Query: 171 GNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFD 230
G+ I RL+QN A + ++P+ F + A+ +N + P RPFD
Sbjct: 170 GSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRN--DDPLHASRPFD 227
Query: 231 KLAEGFIYGQASAALLIEG-----NKNIKILNKSYLARLLGGVIN---LHATASPEPNLN 282
K +GF+ G+ S L++E + KI ++G + H TA P P+
Sbjct: 228 KDRDGFVMGEGSGILILEELESALARGAKI-----YGEMVGYAMTCDAYHITA-PVPDGR 281
Query: 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSL 342
+ LK SGLK M+ Y+N HG+S+P D E AIK+ NH + ++STKS+
Sbjct: 282 GATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSM 341
Query: 343 TGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP---IDNQANFSGKKSISININNVMSN 399
TGH L SG +E +A+V+ + + + P +NLE+P D ++ +S ++ ++ +SN
Sbjct: 342 TGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECD--LDYVPGQSRALIVDVALSN 399
Query: 400 SFGFSGINSSIILCK 414
SFGF G N ++ K
Sbjct: 400 SFGFGGHNVTLAFKK 414
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427 | Back alignment and structure |
|---|
Score = 220 bits (563), Expect = 7e-68
Identities = 121/437 (27%), Positives = 207/437 (47%), Gaps = 58/437 (13%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQ---SNFSKNIIAKINNFNFKNSLNKIT 57
+G++S +G + S +L+ G+SGI I S ++ + +FN ++ ++
Sbjct: 25 LGMLSPVGNTVESTWKALLAGQSGIS-LI--DHFDTSAYATKFAGLVKDFNCEDIIS--- 78
Query: 58 DLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA----GH 113
+KE +K FIQ I+A +QA +S L + RIG I G
Sbjct: 79 -----RKE-----QRKMDAFIQYGIVAGVQAMQDSGLEIT--EENATRIGAAIGSGIGGL 126
Query: 114 NTTQNYQYSLYPEFLKKPEYLSPRY---AIQFMDSNQIGIMSEIFNIRGEGFIIGGASAS 170
+ ++ P +SP + I M + + IM + +RG I A+ S
Sbjct: 127 GLIEE-NHTSLMN--GGPRKISPFFVPSTIVNMVAGHLTIM---YGLRGPSISIATAATS 180
Query: 171 GNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFD 230
G I H R+I D + A +P+ + F A A+ +N + P+ RP+D
Sbjct: 181 GVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRN--DNPQAASRPWD 238
Query: 231 KLAEGFIYGQASAALLIEG-----NKNIKILNKSYLARLLGGVIN---LHATASPEPNLN 282
K +GF+ G + L++E + KI A L+G ++ H T+ P N
Sbjct: 239 KERDGFVLGDGAGMLVLEEYEHAKKRGAKI-----YAELVGFGMSSDAYHMTS-PPENGA 292
Query: 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSL 342
M + L+ +G++ + I Y+N HG+S+P GDK E A+K ++ S++L++STKS+
Sbjct: 293 GAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSM 352
Query: 343 TGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP-----IDNQANFSGKKSISININNVM 397
TGH L ++G VE I S++ +R + + P +NL++P +D + + + S + +
Sbjct: 353 TGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVS---GMEYTL 409
Query: 398 SNSFGFSGINSSIILCK 414
NSFGF G N S+I K
Sbjct: 410 CNSFGFGGTNGSLIFKK 426
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413 | Back alignment and structure |
|---|
Score = 217 bits (555), Expect = 7e-67
Identities = 122/435 (28%), Positives = 203/435 (46%), Gaps = 56/435 (12%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQ---SNFSKNIIAKINNFNFKNSLNKIT 57
+G V+ IG D + + KG +G+ ++ T+ +F I A++ +F+ + L
Sbjct: 11 IGAVTPIGNDAETSWENAKKGVNGVA-KM--TRLNPDDFPVKIAAELKDFDVEKYLE--- 64
Query: 58 DLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA----GH 113
KKE A+K F +I +A A +S L R+G+ I G
Sbjct: 65 -----KKE-----ARKMDRFTHYAIASAEMAVQDSGLVID--DSNANRVGVWIGSGIGGM 112
Query: 114 NTTQNYQYSLYPEFLKKPEYLSPRY---AIQFMDSNQIGIMSEIFNIRGEGFIIGGASAS 170
T + QY ++ + +SP + I M S Q+ I F +G A A+
Sbjct: 113 ETFET-QYEIFLN--RGHRRVSPFFVPMMIPDMGSGQVSIR---FGAKGINSTTVTACAT 166
Query: 171 GNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFD 230
I ++I+ DA + A ++ M + F A A+ N P+ CRPFD
Sbjct: 167 ATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKAL-SLN--PDPETACRPFD 223
Query: 231 KLAEGFIYGQASAALLIEG-----NKNIKILNKSYLARLLGGVIN---LHATASPEPNLN 282
K +GFI G+ + +++E + KI A ++G H TA P PN
Sbjct: 224 KDRDGFIIGEGAGIVILEEYEHAKARGAKI-----YAEIVGYGATGDAYHITA-PAPNGE 277
Query: 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSL 342
M + +GL + +DY+N HG+S+P D+ E AIK V+ H KL ++STKS+
Sbjct: 278 GAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSM 337
Query: 343 TGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP---IDNQANFSGKKSISININNVMSN 399
TGH L +SG +E I +++ +R I P ++L++ D ++ ++ N+N V+SN
Sbjct: 338 TGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCD--LDYVPNEAREANVNVVISN 395
Query: 400 SFGFSGINSSIILCK 414
SFGF G N++++ +
Sbjct: 396 SFGFGGHNATLVFKR 410
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437 | Back alignment and structure |
|---|
Score = 217 bits (556), Expect = 1e-66
Identities = 115/435 (26%), Positives = 202/435 (46%), Gaps = 56/435 (12%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQ---SNFSKNIIAKINNFNFKNSLNKIT 57
MG +S IG D+ + + +KG +GID +I T+ +S ++ ++ NFN ++ ++
Sbjct: 35 MGALSPIGNDVKTTWENALKGVNGID-KI--TRIDTEPYSVHLAGELKNFNIEDHID--- 88
Query: 58 DLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLI----IAGH 113
KKE A++ F Q +I+AA +A +++L + +RIG+ I G
Sbjct: 89 -----KKE-----ARRMDRFTQYAIVAAREAVKDAQLDIN--ENTADRIGVWIGSGIGGM 136
Query: 114 NTTQNYQYSLYPEFLKKPEYLSPRY---AIQFMDSNQIGIMSEIFNIRGEGFIIGGASAS 170
T + + + K P +SP + I M + Q+ I +G A A+
Sbjct: 137 ETFEI-AHKQLMD--KGPRRVSPFFVPMLIPDMATGQVSID---LGAKGPNGATVTACAT 190
Query: 171 GNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFD 230
G I +++Q DA + ++ M I F A A+ N + + CRPF
Sbjct: 191 GTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRAL-STN--DDIETACRPFQ 247
Query: 231 KLAEGFIYGQASAALLIEG-----NKNIKILNKSYLARLLGGVIN---LHATASPEPNLN 282
+ +GF+ G+ + L+IE + I A ++G H TA P P
Sbjct: 248 EGRDGFVMGEGAGILVIESLESAQARGANI-----YAEIVGYGTTGDAYHITA-PAPEGE 301
Query: 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSL 342
M + + +G++ + YLN HG+S+P+GD E+ AIK + L ++STKS+
Sbjct: 302 GGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSM 361
Query: 343 TGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP---IDNQANFSGKKSISININNVMSN 399
TGH L ++G +E I S + ++ + P ++ +P D + ++ ++I MSN
Sbjct: 362 TGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECD--LDIVPNEAQDLDITYAMSN 419
Query: 400 SFGFSGINSSIILCK 414
S GF G N+ ++ K
Sbjct: 420 SLGFGGHNAVLVFKK 434
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424 | Back alignment and structure |
|---|
Score = 216 bits (554), Expect = 2e-66
Identities = 86/439 (19%), Positives = 168/439 (38%), Gaps = 57/439 (12%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQ---SNFSKNIIAKINNFNFKNSLNKIT 57
+G+ + G F L G++ I + S + + A+ +
Sbjct: 10 VGVRAPGGNGTRQFWELLTSGRTATR-RI--SFFDPSPYRSQVAAEADFDPVAEGFGP-- 64
Query: 58 DLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLI----IAGH 113
+E + Q ++ A +A+ S L + P R+G+ +A
Sbjct: 65 ------RE-----LDRMDRASQFAVACAREAFAASGLDPDT--LDPARVGVSLGSAVAAA 111
Query: 114 NTTQNYQYSLYPE----FLKKPEYLSP---RYAIQFMDSNQIGIMSEIFNIRGEGFIIGG 166
+ + +Y L + + +LS Y + + ++ G ++
Sbjct: 112 TSLER-EYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWA---VGAEGPVTMVST 167
Query: 167 ASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTC 226
SG + + +R I+ D +A T ++P+ + F AI A +N + P+
Sbjct: 168 GCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARN--DDPEHAS 225
Query: 227 RPFDKLAEGFIYGQASAALLIEG-----NKNIKILNKSYLARLLGGVINL---HATASPE 278
RPFD +GF+ + +A ++E + +I A + G H T +
Sbjct: 226 RPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIH-----AEISGYATRCNAYHMTG-LK 279
Query: 279 PNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNS 338
+ + L +S IDY+N HGS + D+ E +A K H + ++S
Sbjct: 280 ADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSS 339
Query: 339 TKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP---IDNQANFSGKKSISININN 395
KS+ GH L + G +EI A V+ + + P NL + D ++ ++ + +
Sbjct: 340 IKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECD--LDYVPLEARERKLRS 397
Query: 396 VMSNSFGFSGINSSIILCK 414
V++ GF G S+++L
Sbjct: 398 VLTVGSGFGGFQSAMVLRD 416
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408 | Back alignment and structure |
|---|
Score = 214 bits (547), Expect = 1e-65
Identities = 118/437 (27%), Positives = 201/437 (45%), Gaps = 61/437 (13%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQ---SNFSKNIIAKINNFNFKNSLNKIT 57
+G ++ IG +F + + GKSG+ I T+ S I A++ + + L+
Sbjct: 9 LGALTPIGVGQEAFHKAQLAGKSGVR-PI--TRFDASALPVRIAAEV-DVDPGAYLD--- 61
Query: 58 DLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA----GH 113
+KE ++ F+Q ++IAA A ++ L + + PER+G ++ G
Sbjct: 62 -----RKE-----LRRLDRFVQYALIAAQLALEDAGLKPE--DLDPERVGTLVGTGIGGM 109
Query: 114 NTTQNYQYSLYPEFLKKPEYLSPRY---AIQFMDSNQIGIMSEIFNIRGEGFIIGGASAS 170
T + Q ++ E + P +SP + I M S I + + G + A A+
Sbjct: 110 ETWEA-QSRVFLE--RGPNRISPFFIPMMIANMASAHIAMR---YGFTGPSSTVVTACAT 163
Query: 171 GNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFD 230
G + +R+IQ D L ++PM I AF + A+ +N P+K RPF
Sbjct: 164 GADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRN--EEPEKASRPFT 221
Query: 231 KLAEGFIYGQASAALLIEG-----NKNIKILNKSYLARLLGGVIN---LHATASPEPNLN 282
+GF+ G+ + L++E + +I A L+G + H T P P
Sbjct: 222 LSRDGFVMGEGAGVLVLEAYEHAKKRGARI-----YAELVGFGRSADAHHITE-PHPEGK 275
Query: 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSL 342
M LK +G+ + Y+N HG+S+P+GD+ E+ AIK V+ +H +L+++STKS+
Sbjct: 276 GAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSM 335
Query: 343 TGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP-----IDNQANFSGKKSISININNVM 397
GH L ++G VE IA+V + I P +NLE P +D ++ +
Sbjct: 336 IGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVPE-----PREAKVDYAL 390
Query: 398 SNSFGFSGINSSIILCK 414
SNSF F G N+ + +
Sbjct: 391 SNSFAFGGHNAVLAFKR 407
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412 | Back alignment and structure |
|---|
Score = 211 bits (540), Expect = 1e-64
Identities = 85/439 (19%), Positives = 165/439 (37%), Gaps = 66/439 (15%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDY-EINNTQSNFSKNIIAKINNFNFKNSLNKITDL 59
MG V+++G +L G++ + + + + A + F +
Sbjct: 13 MGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPADWPR---- 68
Query: 60 SEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLI----IAGHNT 115
K+ + ++ A+ A ++ + I R+G+
Sbjct: 69 ----KK-----TRSMGRVSMYAVRASELALADAGFAGDE-SISDGRMGVAYGSSSGSVEP 118
Query: 116 TQNYQYSLYPEFLKKPEYLSPRY---AIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGN 172
+ ++ ++ + + + + ++++G A ASG+
Sbjct: 119 IRA-FGTMLES--GSMTDVTSNSYVQMMPHTTAVNVSLF---WDLKGRIVPTSSACASGS 172
Query: 173 IGIIHGMRLIQNNIVDACLIISAMTD-LSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDK 231
I + I +++ + LS + F + A +N + P T RPFD
Sbjct: 173 QAIGYAYENIAMGKQTL--MLAGGAEELSGPAVAVFDTLYATSTRN--DEPHLTPRPFDA 228
Query: 232 LAEGFIYGQASAALLIEGNKNIKILNKSY---LAR-------LLGGVIN---LHATASPE 278
+G + G+ +A L++E Y AR ++G N H T
Sbjct: 229 KRDGLVVGEGAATLVLE----------EYEHAKARGATIHAEIVGFGCNSDGAHMTQ--- 275
Query: 279 PNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNS 338
P + M L+ + L N I Y+N HG+S+ GD E A + + ++S
Sbjct: 276 PTASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATARTFGER---MPISS 332
Query: 339 TKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA---NFSGKKSISININN 395
KS GH L + G +E ++ M++ + P LNL D ++ ++ +I+
Sbjct: 333 LKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEV-DPACAPLDYIRGEARAIDAEY 391
Query: 396 VMSNSFGFSGINSSIILCK 414
VMSN+F F GIN+S+I +
Sbjct: 392 VMSNNFAFGGINTSLIFRR 410
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430 | Back alignment and structure |
|---|
Score = 209 bits (534), Expect = 2e-63
Identities = 113/435 (25%), Positives = 181/435 (41%), Gaps = 59/435 (13%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQ---SNFSKNIIAKINNFNFKNSLNKIT 57
G+ S IG F NSL GK GI I T+ S+F + A+I +F F K
Sbjct: 30 YGVTSPIGNTPEEFWNSLATGKIGIG-GI--TKFDHSDFDVHNAAEIQDFPFDKYFVK-- 84
Query: 58 DLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA----GH 113
K+ + + ++ AA +A ++ L + + +R G+I+A G
Sbjct: 85 ------KD-----TNRFDNYSLYALYAAQEAVNHANLDVEA--LNRDRFGVIVASGIGGI 131
Query: 114 NTTQNYQYSLYPEFLKKPEYLSPRY---AIQFMDSNQIGIMSEIFNIRGEGFIIGGASAS 170
++ Q E K P+ + P A+ M S + + F G I A +S
Sbjct: 132 KEIED-QVLRLHE--KGPKRVKPMTLPKALPNMASGNVAMR---FGANGVCKSINTACSS 185
Query: 171 GNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFD 230
N I R I+ D L+ ++P I F A+ A+ P + PFD
Sbjct: 186 SNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALS-TT--EDPTRASIPFD 242
Query: 231 KLAEGFIYGQASAALLIEG-----NKNIKILNKSYLARLLGGVIN---LHATASPEPNLN 282
K GF+ G+ S L++E + IL A ++G H T+ P P
Sbjct: 243 KDRNGFVMGEGSGMLVLESLEHAEKRGATIL-----AEVVGYGNTCDAYHMTS-PHPEGQ 296
Query: 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSL 342
I + L+++ + + Y+N HG+S+P +K E AI V + ++STKS
Sbjct: 297 GAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGKE---VPVSSTKSF 353
Query: 343 TGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP---IDNQANFSGKKSISININNVMSN 399
TGH L ++G VE I ++ MR F+ I+ AN + + I +SN
Sbjct: 354 TGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIE--ANVVYGQGLEKEIPYAISN 411
Query: 400 SFGFSGINSSIILCK 414
+FGF G N+ + +
Sbjct: 412 TFGFGGHNAVLAFKR 426
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415 | Back alignment and structure |
|---|
Score = 208 bits (532), Expect = 2e-63
Identities = 77/442 (17%), Positives = 163/442 (36%), Gaps = 75/442 (16%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQ---SNFSKNIIAKINNFNFKNSLNKIT 57
+G+V+ G +A + ++++ G+ G+ + T+ S + + +I++F+ + +
Sbjct: 16 VGVVAPNGLGLAPYWSAVLDGRHGLG-PV--TRFDVSRYPATLAGQIDDFHAPDHIPG-- 70
Query: 58 DLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA----GH 113
+ ++ + ++ AA A ++K + + +G++ A G
Sbjct: 71 ------RL-----LPQTDPSTRLALTAADWALQDAKADPES--LTDYDMGVVTANACGGF 117
Query: 114 NTTQNYQYSLYPEFLKKPEYLSPRY---AIQFMDSNQIGIMSEIFNIRGEGFIIGGASAS 170
+ T ++ + P+ +S +++ QI I +RG + A
Sbjct: 118 DFTHR-EFRKLWS--EGPKSVSVYESFAWFYAVNTGQISIR---HGMRGPSSALVAEQAG 171
Query: 171 GNIGIIHGMRLIQNNIVDACLIISAMTD--LSPMEIQAFHAIGAMGGKNFYNFPKKTCRP 228
G + H R I+ L++S D L P + A G + + P + P
Sbjct: 172 GLDALGHARRTIRR---GTPLVVSGGVDSALDPWGWVSQIASGRI---STATDPDRAYLP 225
Query: 229 FDKLAEGFIYGQASAALLIE--------GNKNIKILNKSYLARLLGGVINL---HATASP 277
FD+ A G++ G+ A L++E G + L G + P
Sbjct: 226 FDERAAGYVPGEGGAILVLEDSAAAEARGRHDA-------YGELAGCASTFDPAPGSGRP 278
Query: 278 EPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN 337
+ L +G +D + G+ P D E AI V+ + +
Sbjct: 279 A----GLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGRE--GVPVT 332
Query: 338 STKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP-----IDNQANFSGKKSISIN 392
K+ TG G ++++ +++ +R+ I P + S ID + S
Sbjct: 333 VPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLG----EPRSTA 388
Query: 393 INNVMSNSFGFSGINSSIILCK 414
+ + G G NS+ +L +
Sbjct: 389 PRTALVLARGRWGFNSAAVLRR 410
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428 | Back alignment and structure |
|---|
Score = 204 bits (521), Expect = 1e-61
Identities = 111/429 (25%), Positives = 186/429 (43%), Gaps = 48/429 (11%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
MGIVSSIG + + SL + KSGI + F + + + I L
Sbjct: 30 MGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRCQV-HGAPDID-------IESLV 81
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA---GHNTTQ 117
+++ + + IA QA ++ L +++ + ER G+I+ T
Sbjct: 82 DRR------AMRFHGRGTAWNHIAMDQAIADAGLTEEE--VSNERTGIIMGSGGPSTRTI 133
Query: 118 NYQYSLYPEFLKKPEYLSPRYAIQFMDSNQI-GIMSEIFNIRGEGFIIGGASASGNIGII 176
+ E K P+ + P +A+ S+ ++ F I+G + I A A+ N I
Sbjct: 134 VDSADITRE--KGPKRVGP-FAVPKAMSSTASATLATFFKIKGINYSISSACATSNHCIG 190
Query: 177 HGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYN-FPKKTCRPFDKLAEG 235
+ +IQ D + + F A+GAM K YN P R +DK +G
Sbjct: 191 NAYEMIQYGKQDRMFAGGCEDLDWTLSV-LFDAMGAMSSK--YNDTPSTASRAYDKNRDG 247
Query: 236 FIYGQASAALLIEG-----NKNIKILNKSYLARLLG-GVIN--LHATASPEPNLNNEISV 287
F+ + L++E + KI ++G G + A P+ I
Sbjct: 248 FVIAGGAGVLVLEDLETALARGAKIY-----GEIVGYGATSDGYDMVA---PSGEGAIRC 299
Query: 288 MNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCL 347
M L K IDY+N H +S+P GD EI AI++++ + +TKSLTGH L
Sbjct: 300 MKMALSTVTSK---IDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSL 356
Query: 348 YSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA--NFSGKKSISININNVMSNSFGFSG 405
++G+ E I S++ M+ FI + ++E A K+ ++ +N V+SNSFGF G
Sbjct: 357 GATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGG 416
Query: 406 INSSIILCK 414
N++++ +
Sbjct: 417 TNATLVFQR 425
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406 | Back alignment and structure |
|---|
Score = 202 bits (516), Expect = 4e-61
Identities = 100/438 (22%), Positives = 185/438 (42%), Gaps = 67/438 (15%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+GIVSSIG + SL +G+SGI + S ++ + + T L
Sbjct: 9 LGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LD-------TTGLI 60
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLI----IAGHNTT 116
++K + + + ++ QA ++ L + Y R+GLI
Sbjct: 61 DRK------VVRFMSDASIYAFLSMEQAIADAGLSPEAY-QNNPRVGLIAGSGGGSPRFQ 113
Query: 117 QNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQI-GIMSEIFNIRGEGFIIGGASASGNIGI 175
++ + + + P Y + ++ + ++ F I G + I A A+ I
Sbjct: 114 VFGADAMRGP--RGLKAVGP-YVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCI 170
Query: 176 IHGMRLIQNNIVDACLII-----SAMTDLSPMEIQAFHAIGAMGGKNFYN-FPKKTCRPF 229
+ + IQ D + +++ F A+GA+ K YN P+K R +
Sbjct: 171 GNAVEQIQLGKQDI--VFAGGGEELCWEMACE----FDAMGALSTK--YNDTPEKASRTY 222
Query: 230 DKLAEGFIYGQASAALLIE-----GNKNIKILNKSYLARLLGGVIN---LHATASPEPNL 281
D +GF+ +++E + I A ++G A P+
Sbjct: 223 DAHRDGFVIAGGGGMVVVEELEHALARGAHIY-----AEIVGYGATSDGADMVA---PSG 274
Query: 282 NNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKS 341
+ M + IDYLN+HG+S+P+GD E++AI+EV+ + +++TK+
Sbjct: 275 EGAVRCMKMAMHGVDTP---IDYLNSHGTSTPVGDVKELAAIREVFGDK--SPAISATKA 329
Query: 342 LTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP-----IDNQANFSGKKSISININNV 396
+TGH L ++G+ E I S++ + FI P++N+E N ++ + V
Sbjct: 330 MTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVT----ETTDRELTTV 385
Query: 397 MSNSFGFSGINSSIILCK 414
MSNSFGF G N+++++ K
Sbjct: 386 MSNSFGFGGTNATLVMRK 403
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416 | Back alignment and structure |
|---|
Score = 201 bits (515), Expect = 8e-61
Identities = 105/437 (24%), Positives = 179/437 (40%), Gaps = 63/437 (14%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDY--EINNTQSNFSKNIIAKINNFNFKNSLNKITD 58
+ +SI DI S L+ G+SGI + T+ + + I + + +
Sbjct: 19 VTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKDP--------VDS 70
Query: 59 LSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA----GHN 114
+ ++ + + Q W ++ + + P+R +++ G
Sbjct: 71 HMGRLD------MRRMSYVQRMGKLLGGQLWESAGSPE----VDPDRFAVVVGTGLGGAE 120
Query: 115 TTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSN----QIGIMSEIFNIRGEGFIIGGASAS 170
Y L P +SP A+Q + N IG+ R A +S
Sbjct: 121 RIVE-SYDLMNA--GGPRKVSP-LAVQMIMPNGAAAVIGLQ---LGARAGVMTPVSACSS 173
Query: 171 GNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFD 230
G+ I H R I D + + + I AF + AM +N + P++ RPFD
Sbjct: 174 GSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRN--DEPERASRPFD 231
Query: 231 KLAEGFIYGQASAALLIEG-----NKNIKILNKSYLARLLGGVIN---LHATASPEPNLN 282
K +GF++G+A A +LIE + K L ARLLG I H A P +
Sbjct: 232 KDRDGFVFGEAGALMLIETEEHAKARGAKPL-----ARLLGAGITSDAFHMVA-PAADGV 285
Query: 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSL 342
M L+ +GL ID++N HG+++P+GD E +AI+ + + + KS
Sbjct: 286 RAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAEANAIRVAGCDQ---AAVYAPKSA 342
Query: 343 TGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP-----IDNQANFSGKKSISININNVM 397
GH + + G +E + +V+ +R I P LN E+P +D A + + +
Sbjct: 343 LGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAG----EPRYGDYRYAV 398
Query: 398 SNSFGFSGINSSIILCK 414
+NSFGF G N ++ +
Sbjct: 399 NNSFGFGGHNVALAFGR 415
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451 | Back alignment and structure |
|---|
Score = 202 bits (515), Expect = 2e-60
Identities = 102/433 (23%), Positives = 178/433 (41%), Gaps = 41/433 (9%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLN-KITDL 59
+GIVS +G LI G SG+ ++ S + + +
Sbjct: 31 IGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGGFDPERS 90
Query: 60 SEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA----GHNT 115
K+ +K FIQ +++AA +A + + + ER ++A G
Sbjct: 91 VPHKE------LRKMDRFIQMAMVAADEALAEAGWAPEA-EQQRERTATVVASGIGGFPG 143
Query: 116 TQNYQYSLYPEFLKKPEYLSPRY---AIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGN 172
+ + LSP + + + QI I RG A A+
Sbjct: 144 LAE-AVRIGET--RGVRRLSPFTIPFFLSNLAAGQISIK---HRFRGPLGCPVTACAASV 197
Query: 173 IGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKL 232
I MR+I+ D L A + + F A A+ F P + RPFD+
Sbjct: 198 QAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALS-TGFSEEPVRASRPFDRD 256
Query: 233 AEGFIYGQASAALLIEG-----NKNIKILNKSYLARLLGGVIN---LHATASPEPNLNNE 284
+GF+ G+ +A +++E + + + A ++G H TA + +
Sbjct: 257 RDGFVMGEGAAMVVVESLDHALARGARPI-----AEIIGYGTTADAYHMTA-GPDDGSGA 310
Query: 285 ISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTG 344
+ M L+ + +DY+N H +S+P+GD EI A+K V+ + ++STKS TG
Sbjct: 311 MRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGVG-AGPAISSTKSATG 369
Query: 345 HCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA---NFSGKKSISININNVMSNSF 401
H L ++G +E S++ +R + LNLE P D A + G + + + +SN F
Sbjct: 370 HLLGAAGAIEAAFSILALRDGVLPGTLNLEHP-DPAADGLDLIGPAARHVPVEIALSNGF 428
Query: 402 GFSGINSSIILCK 414
GF G+N+S++ +
Sbjct: 429 GFGGVNASVLFRR 441
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434 | Back alignment and structure |
|---|
Score = 201 bits (514), Expect = 2e-60
Identities = 93/440 (21%), Positives = 168/440 (38%), Gaps = 67/440 (15%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+ + +++ D + L+ +SGI +++ + +
Sbjct: 35 IAMTTALATDAETTWKLLLDRQSGIR----------------TLDDPFVEEFDLPVRIGG 78
Query: 61 EKKKEFILHI----AQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA----G 112
+EF + ++ + S + + + W N+ ++ R+ + I
Sbjct: 79 HLLEEFDHQLTRIELRRMGYLQRMSTVLSRRLWENAGSP----EVDTNRLMVSIGTGLGS 134
Query: 113 HNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSN----QIGIMSEIFNIRGEGFIIGGAS 168
Y + + +SP +Q N +G+ + + A
Sbjct: 135 AEELVF-SYDDMRA--RGMKAVSP-LTVQKYMPNGAAAAVGLE---RHAKAGVMTPVSAC 187
Query: 169 ASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAI-GAMGGKNFYNFPKKTCR 227
ASG I + I DA + T + + I F + M N + P CR
Sbjct: 188 ASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNN--DDPAGACR 245
Query: 228 PFDKLAEGFIYGQASAALLIEG-----NKNIKILNKSYLARLLGGVIN---LHATASPEP 279
PFD+ +GF++G+ A LLIE + I LAR++G I H A P+P
Sbjct: 246 PFDRDRDGFVFGEGGALLLIETEEHAKARGANI-----LARIMGASITSDGFHMVA-PDP 299
Query: 280 NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNST 339
N + ++ +GL ID++N H + + +GD E AI + + + +
Sbjct: 300 NGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGGN--RPAVYAP 357
Query: 340 KSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP-----IDNQANFSGKKSISININ 394
KS GH + + G VE I +V+ +R + I P LNL + +D A + N
Sbjct: 358 KSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAG----EPRPGNYR 413
Query: 395 NVMSNSFGFSGINSSIILCK 414
++NSFGF G N +I +
Sbjct: 414 YAINNSFGFGGHNVAIAFGR 433
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 5e-60
Identities = 99/434 (22%), Positives = 181/434 (41%), Gaps = 44/434 (10%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+G+V+ +G + LI G+SGI + + ++ A + + + N +
Sbjct: 28 IGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQFN-EQNFV 86
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA----GHNTT 116
K + +I AA A +S H + + G+ I
Sbjct: 87 SKSD------IKSMSSPTIMAIGAAELAMKDSGWHPQS-EADQVATGVAIGMGMIPLEVV 139
Query: 117 QNYQYSLYPEFLKKPEYLSPRY---AIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNI 173
+ K +SP + + M + Q+ I + ++G + A +G
Sbjct: 140 SE-TALNFQT--KGYNKVSPFFVPKILVNMAAGQVSIR---YKLKGPNHAVSTACTTGAH 193
Query: 174 GIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233
+ R I + D + + +SP+ + F A+ N + PK CRPF
Sbjct: 194 AVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALS-TN--SDPKLACRPFHPKR 250
Query: 234 EGFIYGQASAALLIEG-----NKNIKILNKSYLARLLGGVIN---LHATASPEPNLNNEI 285
+GF+ G+ +A L++E + +I A +LG ++ H TA P+P +
Sbjct: 251 DGFVMGEGAAVLVLEEYEHAVQRRARIY-----AEVLGYGLSGDAGHITA-PDPEGEGAL 304
Query: 286 SVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGH 345
M + LK +G++ I Y+N H +S+PLGD E AIK ++K+H L ++STK TGH
Sbjct: 305 RCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGH 364
Query: 346 CLYSSGIVEIIASVIQMRKKFIHPNLNLESP-----IDNQANFSGKKSISININNVMSNS 400
L ++G VE + + + + P LNL+ ++ + + ++NS
Sbjct: 365 LLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVPLKAQEWKTE-KRFIGLTNS 423
Query: 401 FGFSGINSSIILCK 414
FGF G N+++ +
Sbjct: 424 FGFGGTNATLCIAG 437
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428 | Back alignment and structure |
|---|
Score = 199 bits (508), Expect = 1e-59
Identities = 105/438 (23%), Positives = 187/438 (42%), Gaps = 53/438 (12%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGID----YEINNTQSNFS---KNIIAKINNFNFKNSL 53
+G+VS + + L+ G+SG +E+++ + FN +
Sbjct: 17 LGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPVGDGTNGTFNPDLHM 76
Query: 54 NKITDLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA-- 111
+ KE +K FI ++ AA QA ++ H + R G++I
Sbjct: 77 DP--------KE-----QRKVDPFIVYAVGAADQALDDAGWHPEN-DEDQVRTGVLIGSG 122
Query: 112 --GHNTTQNYQYSLYPEFLKKPEYLSPRY---AIQFMDSNQIGIMSEIFNIRGEGFIIGG 166
G + K P +SP + + + S + I +RG +
Sbjct: 123 IGGIEGIVE-AGYTLRD--KGPRRISPFFIPGRLINLASGHVSIK---HKLRGPNHSVVT 176
Query: 167 ASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTC 226
A A+G I RLI D + + +S + + F A A+ + + P
Sbjct: 177 ACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTE-RNDDPTAAS 235
Query: 227 RPFDKLAEGFIYGQASAALLIEG-----NKNIKILNKSYLARLLGGVIN---LHATASPE 278
RP+D+ +GF+ G+ + +++E + KI A ++G ++ H TA P
Sbjct: 236 RPYDEDRDGFVMGEGAGIVVLEELEHALARGAKIY-----AEVIGYGMSGDAFHITA-PT 289
Query: 279 PNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNS 338
+ M + LK++G+ + IDY+N HG+S+ D IE+ A++ V +K+ ++S
Sbjct: 290 ESGEGAQRCMVAALKRAGIVPDEIDYINAHGTSTM-ADTIELGAVERVVGEAAAKISMSS 348
Query: 339 TKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA--NFSGKKSISININNV 396
TKS GH L ++G E + S + +R LNL++P Q + K I+
Sbjct: 349 TKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNP-AAQTRIDLVPHKPRERKIDVA 407
Query: 397 MSNSFGFSGINSSIILCK 414
+SNSFGF G N+S++L +
Sbjct: 408 LSNSFGFGGTNASLVLRR 425
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431 | Back alignment and structure |
|---|
Score = 196 bits (501), Expect = 9e-59
Identities = 111/448 (24%), Positives = 185/448 (41%), Gaps = 59/448 (13%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGID--------------YEINNTQSNFSKNIIAKINN 46
+G+V+ +G + + LI G+ GI T S + A +
Sbjct: 8 LGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPY 67
Query: 47 FNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERI 106
+ ++ L+ K FI ++ AA +A +++ + + ER
Sbjct: 68 GSNPGEFDEALWLNSKAVA----------NFIGYAVCAADEALRDAEWLPTE-EEEKERT 116
Query: 107 GLIIA----GHNTTQNYQYSLYPEFLKKPEYLSPRY---AIQFMDSNQIGIMSEIFNIRG 159
G+ I L E K+ LSP + + M S + + + +G
Sbjct: 117 GVSIGGGIGSICDIVE-AAQLICE--KRLRRLSPFFIPKILVNMASGHVSMK---YGFQG 170
Query: 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFY 219
A A+G I R+IQ D + + + + + F A+ K F
Sbjct: 171 PNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTK-FN 229
Query: 220 NFPKKTCRPFDKLAEGFIYGQASAALLIEG-----NKNIKILNKSYLARLLGGVIN---L 271
+ P++ RPFD +GF+ G+ S +++E + KI A L G ++
Sbjct: 230 SSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIY-----AELCGYGMSGDAH 284
Query: 272 HATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHF 331
H T P + + M L+QSGL N IDY+N H +S+P+GD +E AIK V+ H
Sbjct: 285 HITQ-PPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHA 343
Query: 332 SKLLL--NSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN---FSGK 386
+ L +STK TGH L ++G VE I S++ + LN+++P D +
Sbjct: 344 TSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNP-DPIFDKRFMPLT 402
Query: 387 KSISININNVMSNSFGFSGINSSIILCK 414
S + + MSNSFGF G N+S++
Sbjct: 403 TSKKMLVRTAMSNSFGFGGTNASLLFAS 430
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 157 bits (397), Expect = 9e-42
Identities = 68/530 (12%), Positives = 133/530 (25%), Gaps = 143/530 (26%)
Query: 9 FDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKI-NNFNFKNSLNKITDLSEKKKEFI 67
F+I ++ + G I F + + +I ++ +
Sbjct: 1130 FEIPETGQYTVRLRKGATLLIPKA-LQFDRLVAGQIPTGWD-------ARRYGVPEDI-- 1179
Query: 68 LHIAQKSPLFIQTSIIAALQAWYNSKLHKKK---YKILPERIGLIIA----GHNTTQNYQ 120
Q+ +++ +A +S + + +G I G + +
Sbjct: 1180 ---IQQVDPVTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMY 1236
Query: 121 YSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIHGMR 180
Y + + + L + + M + ++ + G GA A+ + G
Sbjct: 1237 KDRYLDKPVQKDILQESF-VNTMAAWVNMLL---LSSTGPIKTPVGACATAVESLDVGYD 1292
Query: 181 LIQNNIVDACL-----IISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDK---- 231
I CL + A + P + RP
Sbjct: 1293 TIMQGKARVCLVGGFDDFQEEGSYEFANMGATSNAKEEFARG--REPGEMSRPTSTTRNG 1350
Query: 232 --LAEG-----------------FIY----------------------GQASAALLIEGN 250
++G IY G + A GN
Sbjct: 1351 FMESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGN 1410
Query: 251 KNIKILNKSYLARLL---GGVINLHATASPEPNLNNE----------------------- 284
+L+ Y R L I + L E
Sbjct: 1411 FPSPLLDIKYRRRQLELRRQQIKQWKESEYL-YLQEEVAAIKSQRSEEDGPFDETAYLRE 1469
Query: 285 ------------------------------ISVMNSVLKQSGLKKNMIDYLNTHGSSSPL 314
I+ + L GL + + + HG+S+
Sbjct: 1470 RTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRGALATWGLTIDDLGVASFHGTSTVA 1529
Query: 315 GDKIEISAIKEVYKNHF----SKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPN 370
DK E I + K+ + +L K LTGH ++G + + + + N
Sbjct: 1530 NDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGIVPGN 1589
Query: 371 LNLESP-----IDNQANFSGKKSISININNVMSNSFGFSGINSSIILCKK 415
N ++ + + + + I SFGF + I
Sbjct: 1590 RNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHP 1639
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 3e-36
Identities = 58/455 (12%), Positives = 125/455 (27%), Gaps = 79/455 (17%)
Query: 9 FDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKI-NNFNFKNSLNKITDLSEKKKEFI 67
F+I +K G I F + + +I +N
Sbjct: 956 FEIPETGEYSVKLLKGATLYIPKA-LRFDRLVAGQIPTGWN-------AKTYGISDDI-- 1005
Query: 68 LHIAQKSPLFIQTSIIAALQAWYNSKLHKKKY---KILPERIGLIIA----GHNTTQNYQ 120
+ +++ ++A+ S + + +G G + +
Sbjct: 1006 ---ISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRG-M 1061
Query: 121 YSLYPEFLKKPE---YLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIH 177
+ F +P L + I M + ++ + G GA A+ +
Sbjct: 1062 FKDR--FKDEPVQNDILQESF-INTMSAWVNMLL---ISSSGPIKTPVGACATSVESVDI 1115
Query: 178 GMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKN----FYNFPKKTCRPFDKLA 233
G+ I + C++ D F + A P + RP
Sbjct: 1116 GVETILSGKARICIVGGY-DDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTR 1174
Query: 234 EGFIYGQASAALLIEGNKNIKILNKSYLARLLG-----------------GVI-----NL 271
GF+ Q + +I + + G++ +
Sbjct: 1175 NGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHH 1234
Query: 272 HATASPEPNLNNEISVMNSVLKQSGLKKNM---IDYLNTHGSSSPLGDKIEISAIKEVYK 328
+ PNLN + V +++ +K + ++ L P D+ E +
Sbjct: 1235 SSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREI 1294
Query: 329 NHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKS 388
++ ++ L + + G+ Y + +R L ++ +
Sbjct: 1295 HNEAESQLRAAQQQWGNDFYKRD-----PRIAPLRGALATYGLTID-----DLGVASFHG 1344
Query: 389 ISININNV--------MSNSFGFSGINSSIILCKK 415
S N+ M G S N I + +K
Sbjct: 1345 TSTKANDKNESATINEMMKHLGRSEGNPVIGVFQK 1379
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 1e-35
Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 9/151 (5%)
Query: 271 LHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVY--- 327
+ + I+ + L GL + + + HG+S+ DK E + I E+
Sbjct: 1306 QQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHL 1365
Query: 328 -KNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP-----IDNQA 381
++ + ++ K LTGH ++G + ++ + I N N ++
Sbjct: 1366 GRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYV 1425
Query: 382 NFSGKKSISININNVMSNSFGFSGINSSIIL 412
+ K + + V SFGF I+
Sbjct: 1426 LYPSKTLKTDGVRAVSITSFGFGQKGGQAIV 1456
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 2e-28
Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 9/151 (5%)
Query: 271 LHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVY--- 327
+ + I+ + L GL + + + HG+S+ DK E + I E+
Sbjct: 1505 QQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHL 1564
Query: 328 -KNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP-----IDNQA 381
++ + ++ K LTGH ++G + ++ + I N N ++
Sbjct: 1565 GRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYV 1624
Query: 382 NFSGKKSISININNVMSNSFGFSGINSSIIL 412
+ K + + V SFGF I+
Sbjct: 1625 LYPSKTLKTDGVRAVSITSFGFGQKGGQAIV 1655
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 87.7 bits (217), Expect = 1e-18
Identities = 45/383 (11%), Positives = 103/383 (26%), Gaps = 59/383 (15%)
Query: 9 FDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKI-NNFNFKNSLNKITDLSEKKKEFI 67
F+I +K G I F + + +I +N
Sbjct: 1155 FEIPETGEYSVKLLKGATLYIPKA-LRFDRLVAGQIPTGWN-------AKTYGISDDI-- 1204
Query: 68 LHIAQKSPLFIQTSIIAALQAWYNSKLHKKKY---KILPERIGLIIA----GHNTTQNYQ 120
+ +++ ++A+ S + + +G G + +
Sbjct: 1205 ---ISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRG-- 1259
Query: 121 YSLYPEFLKKPEYLSPRYAIQFMDSNQI--GIMSEIFNIRGEGFIIGGASASGNIGIIHG 178
++ + K + +Q N + + + + G GA A+ + G
Sbjct: 1260 --MFKDRFKDEPVQND--ILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIG 1315
Query: 179 MRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKN----FYNFPKKTCRPFDKLAE 234
+ I + C++ D F + A P + RP
Sbjct: 1316 VETILSGKARICIVGGY-DDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRN 1374
Query: 235 GFIYGQASAALLIEGNKNIKILNKSYLARLLGGVIN----------------------LH 272
GF+ Q + +I + +
Sbjct: 1375 GFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHS 1434
Query: 273 ATASPEPNLNNEISVMNSVLKQSGLKKNM---IDYLNTHGSSSPLGDKIEISAIKEVYKN 329
+ PNLN + V +++ +K + ++ L P D+ E + +
Sbjct: 1435 SVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIH 1494
Query: 330 HFSKLLLNSTKSLTGHCLYSSGI 352
+ ++ L + + G+ Y
Sbjct: 1495 NEAESQLRAAQQQWGNDFYKRDP 1517
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 3e-24
Identities = 63/280 (22%), Positives = 112/280 (40%), Gaps = 33/280 (11%)
Query: 149 GIMSEIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFH 208
+S F+ +G I A +S + + + I+ A ++ L P F
Sbjct: 142 NRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFM 201
Query: 209 AIGAMGGKNFYNFPKKTCRPFDKLAEGFIYGQASAALLIEGNKNIK-ILNKSYLARLLGG 267
+G + TCR FD G+ +A A+L+ + + A +L
Sbjct: 202 KLGMLS-------QDGTCRSFDAEGTGYCRAEAVVAVLLTKKSLARRVY-----ATILNA 249
Query: 268 VIN--------LHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIE 319
N + T P+ + + ++ S+ +G ++Y+ HG+ + +GD E
Sbjct: 250 GTNTDGSKEQGV--TF---PSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDPQE 304
Query: 320 ISAIKEVY-KNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP-- 376
++ I LL+ STKS GH +SG+ +I ++ + PNL+ +P
Sbjct: 305 LNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNP 364
Query: 377 -IDNQANFSGK---KSISININNVMSNSFGFSGINSSIIL 412
I + + + + I NV NSFGF G N +IL
Sbjct: 365 EIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVIL 404
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 3e-13
Identities = 51/216 (23%), Positives = 84/216 (38%), Gaps = 52/216 (24%)
Query: 226 CRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLAR-----LLGGVIN--------LH 272
C+ FD G+ + A+L+ K LAR +L N +
Sbjct: 214 CKAFDTAGNGYCRSEGVVAVLLT---------KKSLARRVYATILNAGTNTDGFKEQGV- 263
Query: 273 ATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVY-KNHF 331
T P+ + + ++ S+ + +G+ +Y+ HG+ + +GD E++ I
Sbjct: 264 -TF---PSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQ 319
Query: 332 SKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP---IDNQANFSGKKS 388
LL+ STKS GH +SG+ + ++ + PNL+ SP I G+
Sbjct: 320 EPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALL--DGRLQ 377
Query: 389 ISININNVMS------------NSFGFSGINSSIIL 412
V+ NSFGF G N IIL
Sbjct: 378 -------VVDQPLPVRGGNVGINSFGFGGSNVHIIL 406
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 2e-12
Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 66/227 (29%)
Query: 226 CRPFDKLAEGFIYGQASAALLIE--------GNKNIKILNKSYLARLLGGVIN------- 270
C+PF K A+GF + + L+++ G LA L G +N
Sbjct: 250 CKPFSKAADGFGLAEGAGVLVLQRLSAARREGRP--------VLAVLRGSAVNQDGASNG 301
Query: 271 LHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNH 330
L TA P+ + V+ L+ +G++ +DY+ HG+ + LGD IE+ A+ Y
Sbjct: 302 L--TA---PSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAE 356
Query: 331 FSK---LLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP---IDNQANFS 384
L + S KS GH ++G+ ++ +V+ +R + L+ + P I+ +
Sbjct: 357 RDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIE----WD 412
Query: 385 G-------------------KKSISININNVMSNSFGFSGINSSIIL 412
+ +S SFG SG N+ +I+
Sbjct: 413 LGAVSVVSQARSWPAGERPRRAGVS---------SFGISGTNAHVIV 450
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 3e-12
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 58/223 (26%)
Query: 226 CRPFDKLAEGFIYGQASAALLIE--------GNKNIKILNKSYLARLLGGVINLHATAS- 276
+ F A+GF + + +L+E G++ LA + G +N AS
Sbjct: 228 SKAFGAGADGFGFSEGVTLVLLERLSEARRNGHE--------VLAVVRGSALN-QDGASN 278
Query: 277 --PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSK- 333
P+ + V+ L+ GL+ +D + HG+ + LGD IE +A+ + Y
Sbjct: 279 GLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYGRDRDAD 338
Query: 334 --LLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP---IDNQANFSG--- 385
L L S KS GH ++G+ ++ V+ +R + L++E P +D +S
Sbjct: 339 RPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVD----WSSGGV 394
Query: 386 ----------------KKSISININNVMSNSFGFSGINSSIIL 412
+ ++S +FG SG N+ +I+
Sbjct: 395 ALLAGNQPWRRGERTRRAAVS---------AFGISGTNAHVIV 428
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.6 bits (133), Expect = 2e-08
Identities = 76/436 (17%), Positives = 140/436 (32%), Gaps = 131/436 (30%)
Query: 25 IDYEINNTQSNFSKNII-----AKINNFNFKNSLNKITDLSEK--KKEFILHIAQKSP-- 75
+D+E Q + K+I+ A ++NF+ K+ + D+ + KE I HI
Sbjct: 7 MDFETGEHQYQY-KDILSVFEDAFVDNFDCKD----VQDMPKSILSKEEIDHIIMSKDAV 61
Query: 76 -----LFI-----QTSIIAALQAWYNSKLHKKKYKILPERI-------GLIIAGHNTTQN 118
LF Q ++ Q + L + YK L I ++ + ++
Sbjct: 62 SGTLRLFWTLLSKQEEMV---QKFVEEVL-RINYKFLMSPIKTEQRQPSMMTRMYIEQRD 117
Query: 119 YQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIHG 178
Y+ F K Y R +Q + + +R ++ I G
Sbjct: 118 RLYNDNQVFAK---YNVSR--LQPYLK----LRQALLELRPAKNVL-----------IDG 157
Query: 179 MRLIQNNIVDA-----CLIISAMTDLSPMEIQAFHAIGAMGGKNFY-NFPKKTCRPFDKL 232
+ + + ++Q M K F+ N K C + +
Sbjct: 158 V---------LGSGKTWVALDVCLSY---KVQC-----KMDFKIFWLNL--KNCNSPETV 198
Query: 233 AEGF--IYGQASAAL--LIEGNKNIKI-LN--KSYLARLLGGVINLHATASPEPN----L 281
E + Q + + NIK+ ++ ++ L RLL + P N L
Sbjct: 199 LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL--------KSKPYENCLLVL 250
Query: 282 NNEISVMNS-VLKQSGLK---------KNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHF 331
N V N+ L K + D+L+ ++ D ++ + K+
Sbjct: 251 LN---VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307
Query: 332 SKLLLNSTKSL-----TGHCLYSSGIVEIIASVIQMRKKFIHPN-----------LNLES 375
K L + L T + S I E I + + H N LN+
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE 367
Query: 376 PIDNQANFSGKKSISI 391
P + + F +S+
Sbjct: 368 PAEYRKMF---DRLSV 380
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 415 | |||
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 100.0 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 100.0 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 100.0 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 100.0 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 100.0 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 100.0 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 100.0 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 100.0 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 100.0 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 100.0 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 100.0 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 100.0 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 100.0 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 100.0 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 100.0 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 100.0 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 100.0 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 100.0 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 99.98 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 99.97 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 99.97 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.97 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.95 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.95 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.95 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.94 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.94 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.93 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.93 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.93 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.9 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.88 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.88 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.87 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.86 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.81 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.81 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.79 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.78 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.78 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.77 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.76 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.76 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.75 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.75 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.75 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.74 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.73 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.71 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.71 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.7 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.69 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.69 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.66 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.62 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.61 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.6 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.58 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 99.51 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 99.49 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 99.42 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.34 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.09 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 82.16 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 81.93 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 81.13 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 80.54 |
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-75 Score=572.80 Aligned_cols=394 Identities=21% Similarity=0.289 Sum_probs=360.8
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.+.++||++|++|++++++++.++.. ..++.++++ .+++||+.+| +++++.+.||++++|
T Consensus 13 ~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~---~~~~~~~~~--------~v~~fd~~~~-i~~~~~~~~d~~~~l 80 (412)
T 4ewg_A 13 MGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYF---ESLHTRLAA--------PLPGFAQPAD-WPRKKTRSMGRVSMY 80 (412)
T ss_dssp EEEEBTTBSSHHHHHHHHHHTCCCCEECGGGGGS---SSCCCCEEB--------CCSCCCCCTT-SCHHHHTTCCHHHHH
T ss_pred eEEECCCcCCHHHHHHHHHcCCCceeeCCccccc---cCCccceee--------ecCCCChhhh-CCHHHHhhCCHHHHH
Confidence 6999999999999999999999999999875332 135566777 7889999986 999999999999999
Q ss_pred HHHHHHHHHHhCCC-CCCCCCcCCCcEEEEEecCCChhhHHHhhhhhh-hcCCCCCCchhhcccccchHHHHHHHHhCCC
Q psy5222 81 SIIAALQAWYNSKL-HKKKYKILPERIGLIIAGHNTTQNYQYSLYPEF-LKKPEYLSPRYAIQFMDSNQIGIMSEIFNIR 158 (415)
Q Consensus 81 ~~~a~~~Al~dag~-~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 158 (415)
+++++++||+|||+ ++++ +++.++||++|+..+.....+.+...+ ..+...++|..++..+.+.+++++++.||++
T Consensus 81 ~l~aa~~Al~dAGl~~~~~--i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 158 (412)
T 4ewg_A 81 AVRASELALADAGFAGDES--ISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLK 158 (412)
T ss_dssp HHHHHHHHHHHHTCTTCGG--GGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCCCCccc--cCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCCC
Confidence 99999999999999 7778 899999999996655444433444444 4677889999999999999999999999999
Q ss_pred CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCccc
Q psy5222 159 GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIY 238 (415)
Q Consensus 159 Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~ 238 (415)
||+++|+++|+|++.||..|+++|++|++|+|||||+|. +++.....|..++.++... ..|+..|+|||.+++|+++
T Consensus 159 gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~~--~~p~~~~rpfd~~~~G~~~ 235 (412)
T 4ewg_A 159 GRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTRN--DEPHLTPRPFDAKRDGLVV 235 (412)
T ss_dssp SCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCCT--TCGGGCCCTTBTTCCCBCB
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccCC--CCCCCCCCCCCCCCCCCce
Confidence 999999999999999999999999999999999999996 9999999999999988643 2467899999999999999
Q ss_pred cceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHH
Q psy5222 239 GQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKI 318 (415)
Q Consensus 239 geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~ 318 (415)
||||+++||++.++|+++|++|+++|+|++.++|+.+.+.|+..++.++++++|++||++++||||||+|||||+.+|..
T Consensus 236 geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~ 315 (412)
T 4ewg_A 236 GEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVA 315 (412)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHHHH
T ss_pred ECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccccHH
Confidence 99999999999999999999999999999999999988889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCC-C--cccCcccccCCCE
Q psy5222 319 EISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA-N--FSGKKSISININN 395 (415)
Q Consensus 319 E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~-~--~v~~~~~~~~~~~ 395 (415)
|..++.++|+.. +++++.|+++||++||||++++++++++|+++++||++|+++| +|.+ + +++.+.++++.++
T Consensus 316 E~~al~~~~~~~---~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~-~p~~~~~~~v~~~~~~~~~~~ 391 (412)
T 4ewg_A 316 ESQATARTFGER---MPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEV-DPACAPLDYIRGEARAIDAEY 391 (412)
T ss_dssp HHHHHHHHHCTT---CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSB-CTTSCCCEECCSSCEECCCSE
T ss_pred HHHHHHHHcCCC---CeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCC-CCcccccccccCcccCCCCCE
Confidence 999999999864 8999999999999999999999999999999999999999999 9987 4 7777888889999
Q ss_pred EEEeccCcCCceeEEEEeeC
Q psy5222 396 VMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 396 ~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++|||||||+|+|+||+++
T Consensus 392 ~~~~sfgfGG~na~~vl~~~ 411 (412)
T 4ewg_A 392 VMSNNFAFGGINTSLIFRRV 411 (412)
T ss_dssp EEEEEEEGGGEEEEEEEECC
T ss_pred EEEeeecCCcceEEEEEeeC
Confidence 99999999999999999986
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-75 Score=569.92 Aligned_cols=396 Identities=27% Similarity=0.398 Sum_probs=365.6
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|.|.+.++||++|++|++++++++.++.. .++.++++ .+++||+++| +++++.+.|||+++|
T Consensus 11 ~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~----~~~~~~~~--------~v~~fd~~~~-i~~~~~~~~d~~~~l 77 (413)
T 3o04_A 11 IGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPD----DFPVKIAA--------ELKDFDVEKY-LEKKEARKMDRFTHY 77 (413)
T ss_dssp EEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCGG----GSSCCEEE--------CCSSCCGGGT-SCHHHHTTSCHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHcCCCceeeCCccccc----cCcccccc--------ccCCCChhhc-cCHHHHhhCCHHHHH
Confidence 6999999999999999999999999999876655 55667777 8889999997 999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecC-CChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGH-NTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
+++++++||+|||+++++ +++.++||++|+. ++.......+...+..++..++|..++.++.+++++++++.||++|
T Consensus 78 ~l~Aa~~AL~dAGl~~~~--id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~g 155 (413)
T 3o04_A 78 AIASAEMAVQDSGLVIDD--SNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKG 155 (413)
T ss_dssp HHHHHHHHHHHHTCCCCT--TTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHcCCChhH--cCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCC
Confidence 999999999999999999 9999999999955 4444445444445557888899999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++|+++|+|++.||..|+++|++|++|.|||||+|.++++..+..|...+.++... +|++.|+|||.+++|+++|
T Consensus 156 p~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~---~p~~~~~pfd~~~~g~~~g 232 (413)
T 3o04_A 156 INSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNP---DPETACRPFDKDRDGFIIG 232 (413)
T ss_dssp CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCC---CTTTSCCTTBTTCCSBCBB
T ss_pred cceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccCCC---CCCCCcCCCcCCCCCceEe
Confidence 9999999999999999999999999999999999999889999999999999998654 3788999999999999999
Q ss_pred ceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH
Q psy5222 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~ 317 (415)
|||+++||++.++|+++|.+|+++|+|++.++|+.+. +.|+..++.++++++|++||++++|||||++|||||+.+|.
T Consensus 233 dGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~~d~ 312 (413)
T 3o04_A 233 EGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDE 312 (413)
T ss_dssp CEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHH
T ss_pred ccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCH
Confidence 9999999999999999999999999999999999887 55567889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCCCE
Q psy5222 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISININN 395 (415)
Q Consensus 318 ~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~~~ 395 (415)
.|..+|.++|+....++++++.|+++||++||||++++++++++|+++++||++|+++| +|.++ +++.+.++++.++
T Consensus 313 ~e~~al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 391 (413)
T 3o04_A 313 YETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQ-DEVCDLDYVPNEAREANVNV 391 (413)
T ss_dssp HHHHHHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSB-CSSCCSCCCBSSCEECCCCE
T ss_pred HHHHHHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCC-CCCCCcccCCCcccCCCCCE
Confidence 99999999998766679999999999999999999999999999999999999999999 99877 6777777788999
Q ss_pred EEEeccCcCCceeEEEEeeC
Q psy5222 396 VMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 396 ~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++|||||||+|+|+||++|
T Consensus 392 ~~~~sfgfgG~na~~vl~~~ 411 (413)
T 3o04_A 392 VISNSFGFGGHNATLVFKRI 411 (413)
T ss_dssp EEEEEEETTTEEEEEEEECC
T ss_pred EEEeCccCCceEEEEEEEeC
Confidence 99999999999999999986
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-75 Score=573.49 Aligned_cols=397 Identities=28% Similarity=0.425 Sum_probs=363.9
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
|||++|+|.++++||++|++|++++++++.++.. .+..++++ .+++||+.+| +++++.+.|||+++|
T Consensus 25 ~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~----~~~~~~~~--------~v~~fd~~~~-i~~~~~~~~d~~~~l 91 (427)
T 3ho9_A 25 LGMLSPVGNTVESTWKALLAGQSGISLIDHFDTS----AYATKFAG--------LVKDFNCEDI-ISRKEQRKMDAFIQY 91 (427)
T ss_dssp EEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCT----TCSCCEEE--------CCSSCCCTTT-SCHHHHTTSCHHHHH
T ss_pred eeEECCCCCCHHHHHHHHHcCCCceeeCCccccc----cCccceee--------EcCCCChhhc-CCHHHHhhCCHHHHH
Confidence 6999999999999999999999999999876655 56677777 7889999996 999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCC-hhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNT-TQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
+++++++||+|||+++++ ++..++||++|+..+ .......+......++..++|..++.++.+.++++|++.||++|
T Consensus 92 ~l~aa~~AL~dAGl~~~~--i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~G 169 (427)
T 3ho9_A 92 GIVAGVQAMQDSGLEITE--ENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRG 169 (427)
T ss_dssp HHHHHHHHHHHHTCCCCT--TTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHCCCCccc--ccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCCCC
Confidence 999999999999999999 999999999995544 44444344444456778889999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++|+++|+|++.||..|+++|++|++|+|||||+|.++++..+..|...+.++.... .|++.|+|||.+++|+++|
T Consensus 170 p~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~--~~~~~~~pfd~~~~G~v~g 247 (427)
T 3ho9_A 170 PSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRND--NPQAASRPWDKERDGFVLG 247 (427)
T ss_dssp CEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTT--CHHHHCCTTBTTCCSBCBB
T ss_pred CeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCC--CCCcccCCccCCCCCceee
Confidence 99999999999999999999999999999999999998889999999999999986532 3567899999999999999
Q ss_pred ceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH
Q psy5222 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~ 317 (415)
|||+++||++.++|+++|++|+++|+|++.++|+.+. +.|+..++.++++++|++||++++|||||++|||||+.+|.
T Consensus 248 eGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~d~ 327 (427)
T 3ho9_A 248 DGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDK 327 (427)
T ss_dssp CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHH
T ss_pred eeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEecCCcCCCcCH
Confidence 9999999999999999999999999999999999887 44578999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCccccc-CCC
Q psy5222 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISI-NIN 394 (415)
Q Consensus 318 ~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~-~~~ 394 (415)
.|..++.++|+....++++++.|.++||++||||++++++++++|++++|||++|+++| +|.++ +++.+.++| +.+
T Consensus 328 ~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 406 (427)
T 3ho9_A 328 AEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP-DEGCDLDFVPHEARQVSGME 406 (427)
T ss_dssp HHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSB-CTTCCCBCCBSSCEECSSCC
T ss_pred HHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCC-CCCCCccccccccccCCCCC
Confidence 99999999998765579999999999999999999999999999999999999999999 99876 788888888 789
Q ss_pred EEEEeccCcCCceeEEEEeeC
Q psy5222 395 NVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 395 ~~~v~s~g~gG~~~~~vl~~~ 415 (415)
++++|||||||+|+|+||++|
T Consensus 407 ~a~~~sfGfgG~na~~vl~~~ 427 (427)
T 3ho9_A 407 YTLCNSFGFGGTNGSLIFKKI 427 (427)
T ss_dssp EEEEEEEETTTEEEEEEEECC
T ss_pred EEEEeCccCCceeEEEEEEeC
Confidence 999999999999999999986
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-75 Score=567.73 Aligned_cols=397 Identities=26% Similarity=0.386 Sum_probs=359.4
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|.|.+.++||++|++|++++++++.++.. .++.++++ .+++||+.+ ++++++.+.|||+++|
T Consensus 14 ~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~----~~~~~~~~--------~i~~fd~~~-~~~~~~~~~~d~~~~l 80 (416)
T 1e5m_A 14 LGAITPIGNTLQDYWQGLMEGRNGIGPITRFDAS----DQACRFGG--------EVKDFDATQ-FLDRKEAKRMDRFCHF 80 (416)
T ss_dssp EEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCT----TSSCCEEE--------CCCSCCGGG-TSCHHHHHTSCHHHHH
T ss_pred eeEECCCCCCHHHHHHHHHcCCCeEeeCCccccc----cCccceeE--------EeCCCCccc-cCCHHHHHhcCHHHHH
Confidence 6899999999999999999999999999865444 55666777 777899987 8999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhh-HHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQN-YQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
+++++++||+|||+++++ +++.++||++|+..+... ....+...+..+...++|+.+++++.+.++.++++.||++|
T Consensus 81 ~l~aa~~Al~dAg~~~~~--i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~g 158 (416)
T 1e5m_A 81 AVCASQQAINDAKLVINE--LNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKG 158 (416)
T ss_dssp HHHHHHHHHHHHTCCCCT--TTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHcCCChhh--cCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCCC
Confidence 999999999999999999 899999999996554433 33233333346677889999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++|+++|+|++.||..|+++|++|++|.|||||+|..+++..+..|..++.++..++ +|++.|+|||.+++|+++|
T Consensus 159 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~--~p~~~~rpfd~~~~G~v~g 236 (416)
T 1e5m_A 159 PNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRND--DPLHASRPFDKDRDGFVMG 236 (416)
T ss_dssp CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTT--CGGGTCCTTBTTCCSBCBB
T ss_pred ceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCC--CCccccccCccCCCCceee
Confidence 99999999999999999999999999999999999997789999999999998885432 3678999999999999999
Q ss_pred ceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCC--CCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH
Q psy5222 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHATASP--EPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~--~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~ 317 (415)
||++++||++.++|+++|++|+++|+|++.++|+.+.. .|+..++.++++++|+++|++++|||||++|+|+|+.+|.
T Consensus 237 eGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~D~ 316 (416)
T 1e5m_A 237 EGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDV 316 (416)
T ss_dssp CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHH
T ss_pred eeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCcCH
Confidence 99999999999999999999999999999999998874 4477899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCCCE
Q psy5222 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISININN 395 (415)
Q Consensus 318 ~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~~~ 395 (415)
+|..+|.++|+....++++++.|+++||+++|||++++++++++|+++.+||++|+++| +|.++ +++.+.++|+.++
T Consensus 317 ~E~~al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~-~p~~~~~~v~~~~~~~~~~~ 395 (416)
T 1e5m_A 317 TETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENP-DPECDLDYVPGQSRALIVDV 395 (416)
T ss_dssp HHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSB-CTTCCSCCCBSSCEECCCSE
T ss_pred HHHHHHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCC-CCCCCccccCCccccCCCCE
Confidence 99999999998654568999999999999999999999999999999999999999999 99866 7887888899999
Q ss_pred EEEeccCcCCceeEEEEeeC
Q psy5222 396 VMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 396 ~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++|||||||+|+|+||++|
T Consensus 396 a~~~sfGfGG~n~~~vl~~~ 415 (416)
T 1e5m_A 396 ALSNSFGFGGHNVTLAFKKY 415 (416)
T ss_dssp EEEEEEETTTEEEEEEEECC
T ss_pred EEEccccCCCeeEEEEEEeC
Confidence 99999999999999999986
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-74 Score=566.76 Aligned_cols=396 Identities=24% Similarity=0.377 Sum_probs=359.4
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|.|.++++||++|++|++++++++.++.. .++.++++ .+++||+.+ ++++++.+.|||+++|
T Consensus 35 ~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~----~~~~~~~~--------~i~~fd~~~-~~~~~~~~~~d~~~~l 101 (437)
T 2gqd_A 35 MGALSPIGNDVKTTWENALKGVNGIDKITRIDTE----PYSVHLAG--------ELKNFNIED-HIDKKEARRMDRFTQY 101 (437)
T ss_dssp EEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCT----TSSCCEEE--------CCSSCCGGG-TSCSTTTTTSCHHHHH
T ss_pred eeEECCCCCCHHHHHHHHHcCCCceeeCCccccc----cCccceeE--------EeCCCChhc-CCCHHHHHhcCHHHHH
Confidence 6999999999999999999999999999765444 55666777 677899887 8999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhh-HHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQN-YQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
+++++++||+|||+++++ +++.++||++|+..+... ....+......+...++|+.++.++++.+++++++.||++|
T Consensus 102 ~l~aa~~AL~dAGl~~~~--i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~g 179 (437)
T 2gqd_A 102 AIVAAREAVKDAQLDINE--NTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKG 179 (437)
T ss_dssp HHHHHHHHHHHHTCCCCT--TTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHcCCCccc--cCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCCC
Confidence 999999999999999999 899999999996554433 33233333346677889999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++|+++|+|++.||..|+++|++|++|+|||||+|..+++..+..|..++.++.+. +|++.|+|||.+++|+++|
T Consensus 180 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~---~p~~~~~pfd~~~~G~v~g 256 (437)
T 2gqd_A 180 PNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTND---DIETACRPFQEGRDGFVMG 256 (437)
T ss_dssp SEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCC---CTTTSSCTTCTTCCSBCBB
T ss_pred ceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccCCC---CCccccCCCCCCCCCceee
Confidence 9999999999999999999999999999999999999888999999999999998643 3778999999999999999
Q ss_pred ceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH
Q psy5222 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEP--NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~--~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~ 317 (415)
||++++||++.++|+++|++|+++|+|++.++|+.+...| +..++.++++++|++||++++|||||++|+|+|+.+|.
T Consensus 257 eGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~ 336 (437)
T 2gqd_A 257 EGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDL 336 (437)
T ss_dssp CEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHH
T ss_pred ceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCH
Confidence 9999999999999999999999999999999999887444 67889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCCCE
Q psy5222 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISININN 395 (415)
Q Consensus 318 ~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~~~ 395 (415)
+|..++.++|+....++++++.|+++||+++|+|++++++++++|+++.+||++|+++| +|.++ +++.+.++|+.++
T Consensus 337 ~E~~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~-~p~~~~~~v~~~~~~~~~~~ 415 (437)
T 2gqd_A 337 NEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTP-DPECDLDIVPNEAQDLDITY 415 (437)
T ss_dssp HHHHHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSC-CSSCCSBCCBSSCEECCCSE
T ss_pred HHHHHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCC-CCCCCcccCCCccccCCCCE
Confidence 99999999998754579999999999999999999999999999999999999999999 99876 7787888889999
Q ss_pred EEEeccCcCCceeEEEEeeC
Q psy5222 396 VMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 396 ~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++|||||||+|+|+||++|
T Consensus 416 a~~~sfGfGG~na~~vl~~~ 435 (437)
T 2gqd_A 416 AMSNSLGFGGHNAVLVFKKF 435 (437)
T ss_dssp EEEEEECGGGEEEEEEEECC
T ss_pred EEEccCcCCCeeEEEEEEec
Confidence 99999999999999999986
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-74 Score=568.17 Aligned_cols=399 Identities=24% Similarity=0.334 Sum_probs=357.2
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCC---CCCCCccCCCCCHHHHhcCCHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNK---ITDLSEKKKEFILHIAQKSPLF 77 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~ 77 (415)
|||++|+|.++++||++|++|++++++++.++.. .++.++++ +++. +..||+.+| +++++.++|||+
T Consensus 28 ~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~----~~~~~~~~-----~~~~~~~~~~fd~~~~-~~~~~~~~~d~~ 97 (438)
T 2iwz_A 28 IGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYK----SIPCSVAA-----YVPRGSDEGQFNEQNF-VSKSDIKSMSSP 97 (438)
T ss_dssp EEEEETTEESHHHHHHHHHTTCCCEEECCSGGGT----TSSCCEEE-----CCCBSSSTTSBCGGGT-SCHHHHTTSCHH
T ss_pred eeEECCCCCCHHHHHHHHHcCCCccccCCchhcc----cCccceee-----eeccccccccCChhhc-CCHHHHHhcCHH
Confidence 6999999999999999999999999999876544 45566666 2222 234999885 999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCC-CCCCcCCCcEEEEEecCCChhhHHHhhhhhh-hcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 78 IQTSIIAALQAWYNSKLHK-KKYKILPERIGLIIAGHNTTQNYQYSLYPEF-LKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 78 ~~l~~~a~~~Al~dag~~~-~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
++|+++++++||+|||+++ ++ ++..++||++|+..+.....+.++..+ ..+...++|+.++..+++.+++++++.|
T Consensus 98 ~~l~l~aa~~AL~dAGl~~~~~--i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 175 (438)
T 2iwz_A 98 TIMAIGAAELAMKDSGWHPQSE--ADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRY 175 (438)
T ss_dssp HHHHHHHHHHHHHHHTCCCCSH--HHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCccc--ccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHh
Confidence 9999999999999999998 77 788899999996554433322333333 4566778999999999999999999999
Q ss_pred CCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCC
Q psy5222 156 NIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEG 235 (415)
Q Consensus 156 gl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G 235 (415)
|++||+++|+++|+|++.||..|+++|++|++|+|||||+|..+++..+..|..++.++... .|++.|+|||.+++|
T Consensus 176 gl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~---~p~~~~~pfd~~~~G 252 (438)
T 2iwz_A 176 KLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNS---DPKLACRPFHPKRDG 252 (438)
T ss_dssp TCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCS---CTTTSCCTTCTTCCS
T ss_pred CCCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCCC---CCCcccccCCCCCCC
Confidence 99999999999999999999999999999999999999999878999999999999988542 367899999999999
Q ss_pred ccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCC
Q psy5222 236 FIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEP--NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSP 313 (415)
Q Consensus 236 ~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~--~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~ 313 (415)
+++|||++++||++.++|+++|++|+++|+|++.++|+.+.+.| +..++.++++++|++||++++|||||++|+|+|+
T Consensus 253 ~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~ 332 (438)
T 2iwz_A 253 FVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTP 332 (438)
T ss_dssp BCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCH
T ss_pred EEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCCCc
Confidence 99999999999999999999999999999999999999887445 7789999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCccccc
Q psy5222 314 LGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISI 391 (415)
Q Consensus 314 ~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~ 391 (415)
.+|.+|..+|.++|+....+++|++.|+++||+++|||++++++++++|+++.+||++|+++| +|.++ +++.+.++|
T Consensus 333 ~gD~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~-~p~~~~~~v~~~~~~~ 411 (438)
T 2iwz_A 333 LGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCS-EPEFDLNYVPLKAQEW 411 (438)
T ss_dssp HHHHHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCC-CTTCCSBCCBSSCEEC
T ss_pred ccCHHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCC-CCCCCccccCCCcccC
Confidence 999999999999998654468999999999999999999999999999999999999999999 99876 788788888
Q ss_pred C---CCEEEEeccCcCCceeEEEEeeC
Q psy5222 392 N---INNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 392 ~---~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+ .+++++|||||||+|+|+||+++
T Consensus 412 ~~~~~~~a~~~sfGfGG~na~~vl~~~ 438 (438)
T 2iwz_A 412 KTEKRFIGLTNSFGFGGTNATLCIAGL 438 (438)
T ss_dssp CCSSSCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCccEEEEecCcCCCeeEEEEEeeC
Confidence 8 89999999999999999999986
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-74 Score=559.53 Aligned_cols=395 Identities=26% Similarity=0.421 Sum_probs=357.0
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
|||++|+|.++++||++|++|++++++++.++.. .++.++++ .+ +||+++ .+++++.++||++++|
T Consensus 9 ~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~----~~~~~~~~--------~~-~fd~~~-~~~~~~~~~~d~~~~l 74 (408)
T 1j3n_A 9 LGALTPIGVGQEAFHKAQLAGKSGVRPITRFDAS----ALPVRIAA--------EV-DVDPGA-YLDRKELRRLDRFVQY 74 (408)
T ss_dssp EEEEETTEESHHHHHHHHHHTCCCEEECCSSCCT----TSSCCEEE--------CC-CCCGGG-TSCHHHHTTSCHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHcCCCeeeeccccCcc----cCccceEE--------EE-ccChhh-cCCHHHHHhcCHHHHH
Confidence 6999999999999999999999999999765444 55667777 56 799887 6999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChh-hHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQ-NYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
+++++++||+|||+++++ ++..++|+++|+..+.. .....+...+.++...++|+.++..+++.++.++++.||++|
T Consensus 75 ~~~aa~~AL~dAGl~~~~--id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g 152 (408)
T 1j3n_A 75 ALIAAQLALEDAGLKPED--LDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTG 152 (408)
T ss_dssp HHHHHHHHHHHHTCCGGG--SCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHcCCCccc--cCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCCCC
Confidence 999999999999999999 89999999999655443 333333333346777889999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++|+++|+|++.||..|+++|++|++|+|||||+|..+++..+..|...+.++..+. .|+..|+|||.+++|+++|
T Consensus 153 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~--~p~~~~~pfd~~~dg~v~g 230 (408)
T 1j3n_A 153 PSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNE--EPEKASRPFTLSRDGFVMG 230 (408)
T ss_dssp CBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTT--CHHHHCCTTBTTCCCBCBB
T ss_pred ceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCC--CCCcCcccCcCCCCceEEe
Confidence 99999999999999999999999999999999999998899999999999999885432 3567899999999999999
Q ss_pred ceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCC--CCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH
Q psy5222 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHATASP--EPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~--~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~ 317 (415)
||++++||++.++|+++|++++++|+|++.++|+.+.. .|+..++.++++++|++||++++|||||++|+++|+.+|.
T Consensus 231 eGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~ 310 (408)
T 1j3n_A 231 EGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDR 310 (408)
T ss_dssp CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHH
T ss_pred eeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCH
Confidence 99999999999999999999999999999999998874 4478899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCCCE
Q psy5222 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISININN 395 (415)
Q Consensus 318 ~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~~~ 395 (415)
+|..++.++|+....++++++.|.++||+++|||++++++++++|+++.+||++|+++| +|.++ +++ +.++|+.++
T Consensus 311 ~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~-~~~~~~~~v~-~~~~~~~~~ 388 (408)
T 1j3n_A 311 AEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDP-DPELDLDFVP-EPREAKVDY 388 (408)
T ss_dssp HHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSB-CTTSCSBCCS-SCEECCCSE
T ss_pred HHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCC-CCCCCcccCC-CCcCCCCCE
Confidence 99999999998644478999999999999999999999999999999999999999999 99876 666 778889999
Q ss_pred EEEeccCcCCceeEEEEeeC
Q psy5222 396 VMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 396 ~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++|||||||+|+|+||++|
T Consensus 389 a~~~sfGfGG~na~~vl~~~ 408 (408)
T 1j3n_A 389 ALSNSFAFGGHNAVLAFKRV 408 (408)
T ss_dssp EEEEEECTTSEEEEEEEECC
T ss_pred EEEecccCCcceEEEEEecC
Confidence 99999999999999999986
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-73 Score=558.29 Aligned_cols=405 Identities=24% Similarity=0.309 Sum_probs=357.1
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+|||+|.++++||++|++|++++++++.++.. .++.++++.... ....+.+||+.+| +++++.+.|||+++|
T Consensus 17 ~G~vsp~g~~~~~~w~~L~~G~s~i~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~fd~~~~-i~~~~~~~~d~~~~l 90 (428)
T 3kzu_A 17 LGLVSPLASGVEETWKRLLAGESGARRVTEFEVD----DLACQIACRIPV-GDGTNGTFNPDLH-MDPKEQRKVDPFIVY 90 (428)
T ss_dssp EEEECSSCBSHHHHHHHHHTTCCCEEECCSSCCT----TSSCCEEECCCB-SSSSTTCBCGGGT-SCHHHHTTSCHHHHH
T ss_pred ceEECCCcCCHHHHHHHHHcCCCeeeeCCccccc----cCcCceeeEecc-cccccccCChhhc-CCHHHHHhCCHHHHH
Confidence 6999999999999999999999999999877665 444555551000 0013348999985 999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCCh-hhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTT-QNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
+++++++||+|||+++++. ++..++||++|+..+. ......+......++..++|+.++..+.+.++++|++.||++|
T Consensus 91 ~l~aa~~AL~dAGl~~~~~-id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~G 169 (428)
T 3kzu_A 91 AVGAADQALDDAGWHPEND-EDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRG 169 (428)
T ss_dssp HHHHHHHHHHHHTCCCCSH-HHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHhcCCChhhh-ccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHcCCCC
Confidence 9999999999999987541 4567899999965443 3333333344446777889999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++|+++|+|++.||..|+++|++|++|+|||||+|..+++..+..|...+.++.... ..+...|+|||.+++|+++|
T Consensus 170 p~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~-~~~~~~~~pfd~~~~G~v~g 248 (428)
T 3kzu_A 170 PNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERN-DDPTAASRPYDEDRDGFVMG 248 (428)
T ss_dssp CEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCT-TSGGGTCCTTBTTCCSBCBB
T ss_pred ceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCcc-CCcccccCCcccCCCceeec
Confidence 99999999999999999999999999999999999998899999999999999885421 23667899999999999999
Q ss_pred ceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH
Q psy5222 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~ 317 (415)
|||+++||++.++|+++|.+|+++|+|++.++|+.+. +.++..++.++++++|++||++++||||||+|||+| .+|.
T Consensus 249 dGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT-~~d~ 327 (428)
T 3kzu_A 249 EGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGTST-MADT 327 (428)
T ss_dssp CEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSS-TTHH
T ss_pred CceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEEEecCCcc-hhhH
Confidence 9999999999999999999999999999999999887 444677999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCCCE
Q psy5222 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISININN 395 (415)
Q Consensus 318 ~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~~~ 395 (415)
.|..++.+.|+....++++++.|.++||++||+|++++++++++|+++++||++|+++| +|.++ +++.+.++++.++
T Consensus 328 ~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 406 (428)
T 3kzu_A 328 IELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNP-AAQTRIDLVPHKPRERKIDV 406 (428)
T ss_dssp HHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSB-SSCCSSBCCBSSCEECCCSE
T ss_pred HHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCC-CCCCCcccCCCCCcCCCCCE
Confidence 99999999998766679999999999999999999999999999999999999999999 99876 6777888888999
Q ss_pred EEEeccCcCCceeEEEEeeC
Q psy5222 396 VMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 396 ~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++|||||||+|+|+||++|
T Consensus 407 a~~~sfGfgG~na~~vl~~~ 426 (428)
T 3kzu_A 407 ALSNSFGFGGTNASLVLRRY 426 (428)
T ss_dssp EEEEEEETTTEEEEEEEECC
T ss_pred EEEeCcccChhhEEEEEeec
Confidence 99999999999999999986
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-74 Score=564.27 Aligned_cols=397 Identities=20% Similarity=0.268 Sum_probs=353.9
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
|||++|+|.+.++||++|++|++++++++.++.. .+..++++ .+ +||+.+|++++++.+.|||+++|
T Consensus 10 ~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~----~~~~~~~~--------~~-~fd~~~~~i~~~~~~~~d~~~~l 76 (424)
T 1tqy_A 10 VGVRAPGGNGTRQFWELLTSGRTATRRISFFDPS----PYRSQVAA--------EA-DFDPVAEGFGPRELDRMDRASQF 76 (424)
T ss_dssp EEEEETTEESHHHHHHHHHHTCCCEEECCSSCCT----TSSCCEEE--------CC-CCCHHHHTCCHHHHHHSCHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHcCCCceeeCCCcccc----cCCcceeE--------Ee-ccCHhhcCCCHHHHHhcCHHHHH
Confidence 6999999999999999999999999999865544 45566666 56 89999989999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhh---hcCCCCCCchhhcccccchHHH----HHHH
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEF---LKKPEYLSPRYAIQFMDSNQIG----IMSE 153 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~----~ia~ 153 (415)
+++++++||+|||+++++ ++..++||++|+..+.....+..+..+ .++...++|+.++..+++.+++ ++++
T Consensus 77 ~l~aa~~AL~dAG~~~~~--i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~ 154 (424)
T 1tqy_A 77 AVACAREAFAASGLDPDT--LDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAW 154 (424)
T ss_dssp HHHHHHHHHHHHTCCTTT--CCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCchh--cCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHH
Confidence 999999999999999999 999999999996655443333333333 2455567777766666555555 9999
Q ss_pred HhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 154 IFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 154 ~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
.||++||+++|+++|+|++.||..|+++|++|++|+|||||+|.++++..+..|..++.++..+. +|++.|+|||.++
T Consensus 155 ~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~--~p~~~~rpfd~~~ 232 (424)
T 1tqy_A 155 AVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARND--DPEHASRPFDGTR 232 (424)
T ss_dssp HHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCS--CGGGCCCTTBTTC
T ss_pred hcCCCCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCC--CCCCCccCCCCCC
Confidence 99999999999999999999999999999999999999999998789999999999999885432 4678999999999
Q ss_pred CCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCC
Q psy5222 234 EGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSS 311 (415)
Q Consensus 234 ~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~g 311 (415)
+|+++|||++++||++.++|+++|++|+++|+|++.++|+.+. +.|++.++.++++++|+++|++++|||||++|+|+
T Consensus 233 ~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dId~ve~Hgtg 312 (424)
T 1tqy_A 233 DGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSG 312 (424)
T ss_dssp CCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCC
T ss_pred CceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCcc
Confidence 9999999999999999999999999999999999999999887 45567889999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCccc
Q psy5222 312 SPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSI 389 (415)
Q Consensus 312 t~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~ 389 (415)
|+.+|.+|..++.++|+....++++++.|+++||+++|+|++++++++++|+++.+||++|+++| +|.++ +++.+.+
T Consensus 313 t~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~-~p~~~~~~v~~~~~ 391 (424)
T 1tqy_A 313 TRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTS-DPECDLDYVPLEAR 391 (424)
T ss_dssp CHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSB-BTTBCSCCCBSSCE
T ss_pred CcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCC-CCCCCcccCCCccc
Confidence 99999999999999998654568999999999999999999999999999999999999999999 99866 7887888
Q ss_pred ccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 390 SININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 390 ~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+|+.+++++|||||||+|+|+||+++
T Consensus 392 ~~~~~~a~~~sfG~GG~n~~~vl~~~ 417 (424)
T 1tqy_A 392 ERKLRSVLTVGSGFGGFQSAMVLRDA 417 (424)
T ss_dssp ECCCSEEEEEEEETTTEEEEEEEECH
T ss_pred CCCCCEEEEccccCCceEEEEEEccC
Confidence 89999999999999999999999873
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-73 Score=558.82 Aligned_cols=392 Identities=17% Similarity=0.243 Sum_probs=356.8
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.+.++||++|++|++++++++.++.. .++.++++ .+++||+++ .+++++.++||++++|
T Consensus 16 ~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~----~~~~~~~~--------~v~~fd~~~-~~~~~~~~~~d~~~~l 82 (415)
T 1tqy_B 16 VGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVS----RYPATLAG--------QIDDFHAPD-HIPGRLLPQTDPSTRL 82 (415)
T ss_dssp EEEEETTEESHHHHHHHHHTTCCCEEECTTTTGG----GSSCCEEE--------CCCSCCHHH-HSCTTTGGGCCHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHcCCCcEEECCccccc----CCCcceEE--------EeCCCCchh-cCCHHHHHhcCHHHHH
Confidence 6999999999999999999999999999865444 45566777 677899988 4999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhh-hcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEF-LKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
+++++++||+|||+++++ ++..++||++|+..+.....+.++..+ ..+...++|+.++..+.+.+++++++.||++|
T Consensus 83 ~l~aa~~AL~dAGl~~~~--id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g 160 (415)
T 1tqy_B 83 ALTAADWALQDAKADPES--LTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRG 160 (415)
T ss_dssp HHHHHHHHHHHTTCCGGG--SCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHcCCCccc--cCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCCC
Confidence 999999999999999998 899999999996655444333443333 46667889999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++|+++|+|++.||..|+++|++| +|+|||||+|..+++..+..|..++.++.+. +|++.|+|||.+++|+++|
T Consensus 161 p~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~---~~~~~~~pfd~~~~G~~~g 236 (415)
T 1tqy_B 161 PSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTAT---DPDRAYLPFDERAAGYVPG 236 (415)
T ss_dssp SCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCCCS---CGGGSCCTTSTTCCCBCBB
T ss_pred ceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccCCC---CCCCCcCCCCCCCCCccee
Confidence 99999999999999999999999999 9999999999889999999999999988521 2567899999999999999
Q ss_pred ceEEEEEeCChhhHHhcCC-eeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHH
Q psy5222 240 QASAALLIEGNKNIKILNK-SYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKI 318 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~-~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~ 318 (415)
||++++||++.++|+++|+ +++++|+|++.++|+.+.+.|+. ++.++++++|+++|++++|||||++|||||+.+|.+
T Consensus 237 eGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~-~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~ 315 (415)
T 1tqy_B 237 EGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPA-GLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAA 315 (415)
T ss_dssp CEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCC-SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHH
T ss_pred eeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCH-HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCcCHH
Confidence 9999999999999999999 99999999999999988877766 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCCCEE
Q psy5222 319 EISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISININNV 396 (415)
Q Consensus 319 E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~~~~ 396 (415)
|..+++++|+.. .+++++.|+++||++||||++++++++++|+++.+||++|+++| +|.++ +++.+.++|+.+++
T Consensus 316 E~~al~~~~g~~--~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~-~p~~~~~~v~~~~~~~~~~~a 392 (415)
T 1tqy_B 316 EARAIGRVFGRE--GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSV-PREYGIDLVLGEPRSTAPRTA 392 (415)
T ss_dssp HHHHHHHHHCTT--CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCC-CGGGCCEECBSSCBCCCCSEE
T ss_pred HHHHHHHHhCCC--CceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCC-CCCCCccccCCCCccCCCCEE
Confidence 999999999765 48999999999999999999999999999999999999999999 98865 78878888999999
Q ss_pred EEeccCcCCceeEEEEeeC
Q psy5222 397 MSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 397 ~v~s~g~gG~~~~~vl~~~ 415 (415)
++|||||||+|+|+||+++
T Consensus 393 ~~~sfGfgG~n~~~vl~~~ 411 (415)
T 1tqy_B 393 LVLARGRWGFNSAAVLRRF 411 (415)
T ss_dssp EEEEEETTTEEEEEEEEEC
T ss_pred EEecCcCCCeEEEEEEecC
Confidence 9999999999999999975
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-74 Score=563.87 Aligned_cols=393 Identities=26% Similarity=0.340 Sum_probs=351.2
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
|||++|+|.+.++||++|++|++++++++.++.. .++.++++ . .+||+.+| +++++.+.||++++|
T Consensus 30 ~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~----~~~~~~~g--------~-~~fd~~~~-i~~~~~~~~d~~~~l 95 (428)
T 3mqd_A 30 MGIVSSIGSNTEEVTASLREAKSGISRAEEYAEL----GFRCQVHG--------A-PDIDIESL-VDRRAMRFHGRGTAW 95 (428)
T ss_dssp EEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHT----TCSCCEEE--------C-CCCCHHHH-SCTGGGTTCCHHHHH
T ss_pred eEEECCCcCCHHHHHHHHHcCCCcceeCCccccc----CCCccccc--------c-cCCChhhc-CCHHHHhhCCHHHHH
Confidence 6999999999999999999999999999865444 45566666 4 48999986 999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhh-hcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEF-LKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
+++++++||+|||+++++ ++..++||++|+..+.......+...+ ..+...++|+.+++.+.+.++.++++.||++|
T Consensus 96 ~~~aa~~Al~dAGl~~~~--i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g 173 (428)
T 3mqd_A 96 NHIAMDQAIADAGLTEEE--VSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKG 173 (428)
T ss_dssp HHHHHHHHHHHHTCCHHH--HSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHcCCChhH--ccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCCCC
Confidence 999999999999999998 999999999996655444333444333 36777889999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++|+++|+|++.||..|+++|++|++|+|||||+|. +++.....|..++.++... ...|++.|+|||.+++|+++|
T Consensus 174 p~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~-~s~~~~~~~~~~~~ls~~~-~~~p~~~~rpfd~~~~G~v~g 251 (428)
T 3mqd_A 174 INYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCED-LDWTLSVLFDAMGAMSSKY-NDTPSTASRAYDKNRDGFVIA 251 (428)
T ss_dssp CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCTT-TTSGGGSCCTTBTTCCSBCBB
T ss_pred ceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecc-cchHHHHHHHHhhhhcccc-cCCcccccCcccCCCCCcccc
Confidence 99999999999999999999999999999999999995 7777777799999888541 124778999999999999999
Q ss_pred ceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHH
Q psy5222 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIE 319 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E 319 (415)
|||+++||+++++|+++|++|+++|+|++.++|+.+.+.|+..++.++++++|+ |++ +||||||+|||||+.+|.+|
T Consensus 252 EGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~--gl~-~dId~ve~HgtgT~~~D~~E 328 (428)
T 3mqd_A 252 GGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALS--TVT-SKIDYINPHATSTPAGDAPE 328 (428)
T ss_dssp CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHT--TCC-SCCCEEECCCCSCHHHHHHH
T ss_pred cceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--CCc-cccCEEEEeCCCCCCcCHHH
Confidence 999999999999999999999999999999999998888999999999999999 999 99999999999999999999
Q ss_pred HHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC---cccCcccccCCCEE
Q psy5222 320 ISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN---FSGKKSISININNV 396 (415)
Q Consensus 320 ~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~---~v~~~~~~~~~~~~ 396 (415)
..++.++|+.....+++++.|+++||++||||++++++++++|++++|||++|++++ +|.++ +++......+.+++
T Consensus 329 ~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~ 407 (428)
T 3mqd_A 329 IEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEEL-DPAFADMPIVRKRIDNVQLNTV 407 (428)
T ss_dssp HHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSB-CGGGTTSCBCSSCEESCCCCEE
T ss_pred HHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCC-CcccccCCccCCccccCCCCEE
Confidence 999999998433357999999999999999999999999999999999999999999 98764 55544444568999
Q ss_pred EEeccCcCCceeEEEEeeC
Q psy5222 397 MSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 397 ~v~s~g~gG~~~~~vl~~~ 415 (415)
++|||||||+|+|+||++|
T Consensus 408 ~~~sfGfGG~Na~~vl~~~ 426 (428)
T 3mqd_A 408 LSNSFGFGGTNATLVFQRY 426 (428)
T ss_dssp EEEEEETTTEEEEEEEECC
T ss_pred EEecCcCCcceEEEEEeec
Confidence 9999999999999999986
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-72 Score=554.77 Aligned_cols=393 Identities=25% Similarity=0.333 Sum_probs=356.8
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|.|.+.++||++|++|++++++++.++.. .++.++++ .+++||+.+ .+++++.++|||+++|
T Consensus 30 ~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~----~~~~~~~~--------~v~~fd~~~-~~~~~~~~~~d~~~~l 96 (430)
T 1ox0_A 30 YGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHS----DFDVHNAA--------EIQDFPFDK-YFVKKDTNRFDNYSLY 96 (430)
T ss_dssp EEEEBTTBSSHHHHHHHHHHTCCCEEECCSSCCT----TSSCCEEE--------CCSSCCHHH-HCCGGGGGTCCHHHHH
T ss_pred EEEECCCcCCHHHHHHHHHcCCCeeeeCCccccc----CCccceee--------eccCCChhh-cCCHHHHHhcCHHHHH
Confidence 6899999999999999999999999999865544 45666777 677899888 5899999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChh-hHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQ-NYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
+++++++||+|||+++++ ++..++||++|+..+.. ...+.+......+...++|+.++..+++.++++|++.||++|
T Consensus 97 ~l~aa~~AL~dAG~~~~~--i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~G 174 (430)
T 1ox0_A 97 ALYAAQEAVNHANLDVEA--LNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANG 174 (430)
T ss_dssp HHHHHHHHHHHTTCCTTT--SCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHcCCChhh--cCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCCC
Confidence 999999999999999999 89999999999655443 333233333346777889999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++|+++|+|++.||..|+++|++|++|+|||||+|..+++..+..|..++.++... .|+..|+|||.+++|+++|
T Consensus 175 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~---~p~~~~~pFd~~~~g~~~g 251 (430)
T 1ox0_A 175 VCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTE---DPTRASIPFDKDRNGFVMG 251 (430)
T ss_dssp CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCS---STTSSSCTTBTTCCSBCBC
T ss_pred ceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccCCC---CCCCCCCCCCCCCCCcccc
Confidence 9999999999999999999999999999999999999888999999999999888543 3778999999999999999
Q ss_pred ceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH
Q psy5222 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEP--NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~--~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~ 317 (415)
|||+++||++.++|+++|.+|+++|+|++.++|+.+...| +..++.++++++|+++|++++|||||++|+++|+.+|.
T Consensus 252 eGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~ 331 (430)
T 1ox0_A 252 EGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEK 331 (430)
T ss_dssp CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHH
T ss_pred ceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccCH
Confidence 9999999999999999999999999999999999887555 67899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCCCE
Q psy5222 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISININN 395 (415)
Q Consensus 318 ~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~~~ 395 (415)
.|..++.++|+. ++++++.|+++||+++|+|++++++++++|+++.+||++|+++| +|.++ +++.+.++++.++
T Consensus 332 ~E~~al~~~~g~---~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~-~p~~~~~~v~~~~~~~~~~~ 407 (430)
T 1ox0_A 332 GESGAIVAVLGK---EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEV-SDYIEANVVYGQGLEKEIPY 407 (430)
T ss_dssp HHHHHHHHHHCS---SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSB-CTTCCSEECBSSCEECCCSE
T ss_pred HHHHHHHHHhCC---CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCC-CCCCCcccCCCCCcCCCCCE
Confidence 999999999976 48999999999999999999999999999999999999999999 99876 6777777788999
Q ss_pred EEEeccCcCCceeEEEEeeC
Q psy5222 396 VMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 396 ~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++|||||||+|+|+||++|
T Consensus 408 a~~~sfGfGG~na~~vl~~~ 427 (430)
T 1ox0_A 408 AISNTFGFGGHNAVLAFKRW 427 (430)
T ss_dssp EEEEEEETTTEEEEEEEECC
T ss_pred EEEeCccCCCceEEEEEeec
Confidence 99999999999999999985
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-73 Score=556.25 Aligned_cols=390 Identities=25% Similarity=0.369 Sum_probs=346.8
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.+.++||++|++|++++++++.++.. .++.++++ .++ ||+++| +++++.++|||+++|
T Consensus 9 ~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~----~~~~~~~~--------~v~-fd~~~~-~~~~~~~~~d~~~~l 74 (406)
T 2vba_A 9 LGIVSSIGNNQQEVLASLREGRSGITFSQELKDS----GMRSHVWG--------NVK-LDTTGL-IDRKVVRFMSDASIY 74 (406)
T ss_dssp EEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHT----TCSCCEEE--------CCC-CCCTTS-SCHHHHTTCCHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHcCCCeEEeCCccccc----CCccceEE--------Eec-CChhhc-CCHHHHHhcCHHHHH
Confidence 6999999999999999999999999998754444 45566666 666 999885 999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCC-CcEEEEEecCCChhhHHHhhhhhhh--cCCCCCCchhhcccccchHHHHHHHHhCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILP-ERIGLIIAGHNTTQNYQYSLYPEFL--KKPEYLSPRYAIQFMDSNQIGIMSEIFNI 157 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~-~~~gv~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 157 (415)
+++++++||+|||+++++ ++. .++||++|+..+.....+.++..+. .+...++|+.+++++.+.+++++++.||+
T Consensus 75 ~l~aa~~Al~dAg~~~~~--i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 152 (406)
T 2vba_A 75 AFLSMEQAIADAGLSPEA--YQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKI 152 (406)
T ss_dssp HHHHHHHHHHHHTCCHHH--HTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHCCCChhH--cCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhccC
Confidence 999999999999999888 887 9999999966554443334444443 34455788899999999999999999999
Q ss_pred CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcc
Q psy5222 158 RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFI 237 (415)
Q Consensus 158 ~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~ 237 (415)
+||+++|+++|+|++.||..|+++|++|++|++||||+|..+++..+. |..++.++... ..+|++.|+|||.+++|++
T Consensus 153 ~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls~~~-~~~p~~~~~pfd~~~~G~v 230 (406)
T 2vba_A 153 HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKY-NDTPEKASRTYDAHRDGFV 230 (406)
T ss_dssp CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBCCSC-TTSGGGSCCTTBTTCCSBC
T ss_pred CCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-Hhhcccccccc-CCCCccccCcCcCCCCceE
Confidence 999999999999999999999999999999999999999777777777 99999887411 0126788999999999999
Q ss_pred ccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH
Q psy5222 238 YGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317 (415)
Q Consensus 238 ~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~ 317 (415)
+|||++++||+++++|+++|++||++|+|++.++|+.+.+.|+..++.++|+++|+++| +||||||+|+|+|+.+|.
T Consensus 231 ~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~ai~~al~~ag---~dId~ve~HgtgT~~gD~ 307 (406)
T 2vba_A 231 IAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVD---TPIDYLNSHGTSTPVGDV 307 (406)
T ss_dssp BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTCC---SCCCEEECCCCSCHHHHH
T ss_pred eeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhCC---CCccEEEeeCccCcccCH
Confidence 99999999999999999999999999999999999988888999999999999999999 899999999999999999
Q ss_pred HHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC---cccCcccccCCC
Q psy5222 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN---FSGKKSISININ 394 (415)
Q Consensus 318 ~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~---~v~~~~~~~~~~ 394 (415)
+|..+|.++|+.. .+++++.|+++||+++|||++++++++++|+++.+||++|+++| +|.++ +++.+.++ +.+
T Consensus 308 ~E~~al~~~fg~~--~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~-~~~~~~~~~v~~~~~~-~~~ 383 (406)
T 2vba_A 308 KELAAIREVFGDK--SPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEEL-DEQAAGLNIVTETTDR-ELT 383 (406)
T ss_dssp HHHHHHHHHHTTC--CCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSB-CTTCTTSEECCSCEEC-CCC
T ss_pred HHHHHHHHHhCcC--CCceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCC-CCCccccccCCcccCC-CCC
Confidence 9999999999865 48999999999999999999999999999999999999999999 99765 55554444 689
Q ss_pred EEEEeccCcCCceeEEEEeeC
Q psy5222 395 NVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 395 ~~~v~s~g~gG~~~~~vl~~~ 415 (415)
++++|||||||+|+|+||+++
T Consensus 384 ~a~~~sfGfgG~na~~vl~~~ 404 (406)
T 2vba_A 384 TVMSNSFGFGGTNATLVMRKL 404 (406)
T ss_dssp EEEEEEEETTTEEEEEEEECC
T ss_pred EEEEcCCCCCCeEEEEEEEeC
Confidence 999999999999999999985
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-72 Score=548.87 Aligned_cols=392 Identities=22% Similarity=0.309 Sum_probs=350.8
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCcc--ccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNT--QSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFI 78 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (415)
|||++|+|.++++||++|++|++++++++.++ .. .++.++++ .+++ |+.+| +++++.+.|||++
T Consensus 35 ~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~----~~~~~~~~--------~v~~-d~~~~-~~~~~~~~~d~~~ 100 (434)
T 2gp6_A 35 IAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEF----DLPVRIGG--------HLLE-EFDHQ-LTRIELRRMGYLQ 100 (434)
T ss_dssp EEEECSSCSSHHHHHHHHHTTCCCEEECCCHHHHHH----CCSCCEEE--------CCSC-CSTTS-SCHHHHHTCCHHH
T ss_pred eEEeCCCCCCHHHHHHHHHcCCCeeeeCCccccccc----cCccceeE--------EcCC-chhhh-CCHHHHHhCCHHH
Confidence 69999999999999999999999999998643 22 45566666 4555 66664 9999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhh-hcCCCCCCchhhcccccchHHHHHHHHhCC
Q psy5222 79 QTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEF-LKKPEYLSPRYAIQFMDSNQIGIMSEIFNI 157 (415)
Q Consensus 79 ~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 157 (415)
+|+++++++||+|||+ ++ +++.++||++|+..+.......++..+ .++...++|+.+++++++.++++|++.||+
T Consensus 101 ~l~l~aa~~ALedAG~--~~--~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl 176 (434)
T 2gp6_A 101 RMSTVLSRRLWENAGS--PE--VDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHA 176 (434)
T ss_dssp HHHHHHHHHHHHHTTC--CC--CCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhcCC--Cc--cCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcC
Confidence 9999999999999999 55 788999999996544433322333333 466778999999999999999999999999
Q ss_pred CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcc-cccCCCCCCCCCCcccCCCCCCCCc
Q psy5222 158 RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIG-AMGGKNFYNFPKKTCRPFDKLAEGF 236 (415)
Q Consensus 158 ~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~-~ls~~~~~~~~~~~~~pfd~~~~G~ 236 (415)
+||+++|+++|+|++.||..|+++|++|++|+|||||+|....+..+..|..++ .++..+. .|++.|+|||.+++|+
T Consensus 177 ~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~--~p~~~~~pfd~~~~g~ 254 (434)
T 2gp6_A 177 KAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNND--DPAGACRPFDRDRDGF 254 (434)
T ss_dssp CSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTT--CTTTSCCSSBTTCCCC
T ss_pred CCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCC--CCCCceecccccCCCc
Confidence 999999999999999999999999999999999999999888999999999988 6664332 3778999999999999
Q ss_pred cccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCC
Q psy5222 237 IYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEP--NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPL 314 (415)
Q Consensus 237 ~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~--~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~ 314 (415)
++|||++++||++.++|+++|++++++|+|++.++|+.+...| +..++.++++++|+++|++++|||||++|+++|+.
T Consensus 255 v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~ 334 (434)
T 2gp6_A 255 VFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQV 334 (434)
T ss_dssp CBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECCCCSCHH
T ss_pred ceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcc
Confidence 9999999999999999999999999999999999999887444 77899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccC
Q psy5222 315 GDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISIN 392 (415)
Q Consensus 315 ~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~ 392 (415)
+|.+|..+|.++|+.. ++++++.|.++||++||+|++++++++++|+++.+||++|+++| +|.++ +++.+.++++
T Consensus 335 ~D~~E~~al~~~fg~~--~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~-~p~~~~~~v~~~~~~~~ 411 (434)
T 2gp6_A 335 GDLAEGRAINNALGGN--RPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNL-DPEIDLDVVAGEPRPGN 411 (434)
T ss_dssp HHHHHHHHHHHHHTTC--CCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSB-CTTCCCEECCSSCCCSC
T ss_pred chHHHHHHHHHHhccC--CCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCC-CCCCCccccCCCccCCC
Confidence 9999999999999765 68999999999999999999999999999999999999999999 99876 7777788888
Q ss_pred CCEEEEeccCcCCceeEEEEeeC
Q psy5222 393 INNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 393 ~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
.+++++|||||||+|+|+||++|
T Consensus 412 ~~~a~~~sfGfGG~na~~vl~~~ 434 (434)
T 2gp6_A 412 YRYAINNSFGFGGHNVAIAFGRY 434 (434)
T ss_dssp CCEEEEEEEETTTEEEEEEEECC
T ss_pred CCEEEEeCCcCCCeeEEEEEEeC
Confidence 99999999999999999999986
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-73 Score=557.74 Aligned_cols=405 Identities=24% Similarity=0.319 Sum_probs=358.1
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
|||++|+|.++++||++|++|++++++++.++.. .++.++++.......+++.+||+.+| +++++.+.||++++|
T Consensus 31 ~g~~~P~g~~~~~~w~~l~~g~s~i~~~~~~~~~----~~~~~~~g~v~~~~~~~~~~fd~~~~-i~~~~~~~~d~~~~L 105 (451)
T 4ddo_A 31 IGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAG----ELSAKVGGTVQDVAEDPEGGFDPERS-VPHKELRKMDRFIQM 105 (451)
T ss_dssp EEEEETTEESHHHHHHHHHTTCCCEEECCHHHHT----TSSCCEEECCCCTTTCTTTCCCGGGT-SCHHHHTTSCHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHcCCCeeeeCCccccc----cccCccceEccccccccccccchhhh-CCHHHHhhCCHHHHH
Confidence 6999999999999999999999999999865444 44556666110000012338999997 999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCc-CCCcEEEEEecCCC-hhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKI-LPERIGLIIAGHNT-TQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIR 158 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~-~~~~~gv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 158 (415)
+++|+++||+|||+++++ + +..++||++|+..+ .......+......+...++|+.++..+.+.+++++++.||++
T Consensus 106 ~l~Aa~~AL~dAGl~~~~--i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 183 (451)
T 4ddo_A 106 AMVAADEALAEAGWAPEA--EQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFR 183 (451)
T ss_dssp HHHHHHHHHHHHTCCCCS--HHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCChhh--cccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHhcCC
Confidence 999999999999999998 8 88999999995544 4443433333334667788999999999999999999999999
Q ss_pred CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCccc
Q psy5222 159 GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIY 238 (415)
Q Consensus 159 Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~ 238 (415)
||+++|+++|+|++.||..|+++|++|++|+|||||+|..+++..+..|...+.++.. ...+|...|+|||.+++|+++
T Consensus 184 Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~-~~~~~~~~~~pfd~~~~g~v~ 262 (451)
T 4ddo_A 184 GPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTG-FSEEPVRASRPFDRDRDGFVM 262 (451)
T ss_dssp SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCS-CTTSGGGSCCTTBTTCCSBCB
T ss_pred CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccC-CCcCccccccccccCCCCcEE
Confidence 9999999999999999999999999999999999999998999999999999998854 122466789999999999999
Q ss_pred cceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCC
Q psy5222 239 GQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGD 316 (415)
Q Consensus 239 geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d 316 (415)
||||+++||++.++|+++|.+|+++|+|++.++|+.+. ..|+..++.++++++|++||++++|||||++|+|+|+.+|
T Consensus 263 gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~d 342 (451)
T 4ddo_A 263 GEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGD 342 (451)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHH
T ss_pred eceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCcCcccC
Confidence 99999999999999999999999999999999998877 4457789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCC---CcccCcccccCC
Q psy5222 317 KIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA---NFSGKKSISINI 393 (415)
Q Consensus 317 ~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~---~~v~~~~~~~~~ 393 (415)
..|..++.++|+. ..++++++.|+++||++||||++++++++++|+++++||++|+++| +|.+ ++++.+.++++.
T Consensus 343 ~~E~~al~~~~~~-~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~-~~~~~~~~~~~~~~~~~~~ 420 (451)
T 4ddo_A 343 AGEIEALKTVFGV-GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHP-DPAADGLDLIGPAARHVPV 420 (451)
T ss_dssp HHHHHHHHHHHCS-SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSB-CGGGTTSEECCSSCEECCC
T ss_pred HHHHHHHHHHhCC-CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCC-CcccccccccCCCCCCCCc
Confidence 9999999999986 3468999999999999999999999999999999999999999999 9976 377777888889
Q ss_pred CEEEEeccCcCCceeEEEEeeC
Q psy5222 394 NNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 394 ~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++++|||||||+|+|+||+++
T Consensus 421 ~~a~~~sfgfgG~na~~vl~~~ 442 (451)
T 4ddo_A 421 EIALSNGFGFGGVNASVLFRRY 442 (451)
T ss_dssp SEEEEEEEETTTEEEEEEEEES
T ss_pred CEEEEeeEcCCCceEEEEEeeC
Confidence 9999999999999999999985
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-72 Score=547.59 Aligned_cols=391 Identities=25% Similarity=0.347 Sum_probs=348.9
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCcc--ccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNT--QSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFI 78 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (415)
|||++|+|.++++||++|++|++++++++.++ .. .++.++++ .+++ |+.+| +++++.+.|||++
T Consensus 19 ~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~----~~~~~~~~--------~~~~-d~~~~-~~~~~~~~~d~~~ 84 (416)
T 2wge_A 19 VTATTSISPDIESTWKGLLAGESGIHALEDEFVTKW----DLAVKIGG--------HLKD-PVDSH-MGRLDMRRMSYVQ 84 (416)
T ss_dssp EEEEESSCSSHHHHHHHHHTTCCCCEECCCHHHHHH----TCSCCEEB--------CCSS-CGGGG-CCHHHHHHSCHHH
T ss_pred eEEECCCCCCHHHHHHHHHcCCCEEEeCCccccccc----cCCccEEE--------EeCC-chhhh-CCHHHHHhcCHHH
Confidence 69999999999999999999999999998644 22 45566677 5555 77775 9999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhh-hhhcCCCCCCchhhcccccchHHHHHHHHhCC
Q psy5222 79 QTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYP-EFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNI 157 (415)
Q Consensus 79 ~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 157 (415)
+|+++++++||+|||+ ++ +++.++||++|+..+.....+.++. ....++..++|+.++..+.+.++++|++.||+
T Consensus 85 ~l~l~aa~~AL~dAG~--~~--~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 160 (416)
T 2wge_A 85 RMGKLLGGQLWESAGS--PE--VDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA 160 (416)
T ss_dssp HHHHHHHHHHHHHTTC--CC--CCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCC--Cc--cCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc
Confidence 9999999999999999 56 7889999999965443332223333 33467778899999999999999999999999
Q ss_pred CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcc
Q psy5222 158 RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFI 237 (415)
Q Consensus 158 ~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~ 237 (415)
+||+++++++|+|++.||..|+++|++|++|++||||+|..+.+..+..|...+.++..+. .++..|+|||.+++|++
T Consensus 161 ~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~pfd~~~dg~v 238 (416)
T 2wge_A 161 RAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRND--EPERASRPFDKDRDGFV 238 (416)
T ss_dssp CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTT--SGGGSCCTTBTTCCCBC
T ss_pred CCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhcccc--CCcccccccccCCCCcc
Confidence 9999999999999999999999999999999999999998888888899999998875432 36788999999999999
Q ss_pred ccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCC
Q psy5222 238 YGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEP--NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLG 315 (415)
Q Consensus 238 ~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~--~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~ 315 (415)
+|||++++||++.++|+++|.+++++|+|++.++|+.+...| ...++.++++++|+++|++++||||||+|||||+.+
T Consensus 239 ~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~g 318 (416)
T 2wge_A 239 FGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIG 318 (416)
T ss_dssp BBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHH
T ss_pred ccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEECCCCCcCC
Confidence 999999999999999999999999999999999999887545 778999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCC
Q psy5222 316 DKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISINI 393 (415)
Q Consensus 316 d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~ 393 (415)
|.+|..+++.+ +.. ++++++.|+++||++||+|++++++++++|+++.+||++|+++| +|.++ +++.+.++++.
T Consensus 319 D~~E~~al~~~-~~~--~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~-~p~~~~~~v~~~~~~~~~ 394 (416)
T 2wge_A 319 DAAEANAIRVA-GCD--QAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETP-DPEIDLDVVAGEPRYGDY 394 (416)
T ss_dssp HHHHHHHHHHT-TCT--TSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSB-CTTTCCEECCSSCEECCC
T ss_pred CHHHHHHHHHh-ccC--CCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCC-CCCCCcccCCCCCccCCC
Confidence 99999999988 443 58999999999999999999999999999999999999999999 99876 67777777788
Q ss_pred CEEEEeccCcCCceeEEEEeeC
Q psy5222 394 NNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 394 ~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++++|||||||+|+|+||++|
T Consensus 395 ~~a~~~sfGfGG~na~~vl~~~ 416 (416)
T 2wge_A 395 RYAVNNSFGFGGHNVALAFGRY 416 (416)
T ss_dssp CEEEEEEEETTTEEEEEEEECC
T ss_pred CEEEEeCcccCceeEEEEEEeC
Confidence 9999999999999999999986
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-71 Score=591.04 Aligned_cols=388 Identities=19% Similarity=0.281 Sum_probs=351.7
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
|||++|+|.++++||++|.+|++++++.+..|...++. .+ ...+ +++++..||+.+|++++++.+.|||+++|
T Consensus 11 mg~r~P~~~~~~~~W~~l~~g~~~~~~~~~~~~~~~~~-~~-~~~g-----~~~~~~~FD~~~f~i~~~ea~~mDp~~rL 83 (965)
T 3hhd_A 11 MSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAGLYG-LP-RRSG-----KLKDLSRFDASFFGVHPKQAHTMDPQLRL 83 (965)
T ss_dssp EEEEBTTBSSHHHHHHHHHTTCCCEECSSSSSCTTGGG-CC-SCEE-----CCSCSSCCCTTTTTCCHHHHHTSCHHHHH
T ss_pred eeEECCCCCCHHHHHHHHHcCCCcccCCCccccccccc-Cc-cccc-----ccCChhhcChhhcCCCHHHHhhcCHHHHH
Confidence 79999999999999999999999999976543332221 11 1122 56678889999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCCCc
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGE 160 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp 160 (415)
+++++++||+|||+++++ ++..++||++|+..+. +...+..++..+.++.++++..++++++|++.||++||
T Consensus 84 ~leaa~eALedAGi~~~~--i~~~~~Gv~vG~~~~d------~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~GP 155 (965)
T 3hhd_A 84 LLEVTYEAIVDGGINPDS--LRGTHTGVWVGVSGSE------TSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFRGP 155 (965)
T ss_dssp HHHHHHHHHHHTTCCGGG--GTTSCCEEEEEECCCH------HHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCCSC
T ss_pred HHHHHHHHHHHcCCChHH--cCCceeEEEEeccchh------HHHHHhcCccccCcccccccccchHHHHHHHHhCCCCC
Confidence 999999999999999999 9999999999965542 22334466777888999999999999999999999999
Q ss_pred cccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCccccc
Q psy5222 161 GFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYGQ 240 (415)
Q Consensus 161 ~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~ge 240 (415)
+++|+++|+||+.||++|+++|++|+||++||||+|.++++..+..|...+.++ |++.|+|||.+++|+++||
T Consensus 156 s~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls-------~~g~~~~Fd~~adG~~~gE 228 (965)
T 3hhd_A 156 SIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS-------PEGTCKAFDTAGNGYCRSE 228 (965)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBC-------TTCCCCTTBTTCCSBCBBC
T ss_pred eeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcC-------CCCccccchhccCCccccc
Confidence 999999999999999999999999999999999999999999999999999998 7789999999999999999
Q ss_pred eEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC---CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH
Q psy5222 241 ASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS---PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317 (415)
Q Consensus 241 Ga~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~---~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~ 317 (415)
|++++||++.++|+ +|+++|+|++.++|+.+. +.|+..++.++++++|++||++++||||||+|||||+.+|.
T Consensus 229 GagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~ 304 (965)
T 3hhd_A 229 GVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDP 304 (965)
T ss_dssp EEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHH
T ss_pred eEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCH
Confidence 99999999999885 489999999999999662 88999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC-CCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC-------cccCccc
Q psy5222 318 IEISAIKEVYKNH-FSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN-------FSGKKSI 389 (415)
Q Consensus 318 ~E~~al~~~~~~~-~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~-------~v~~~~~ 389 (415)
+|..+|.++|+.. ..+++|++.|+++||+++|||+.++++++++|++++|||++|+++| +|.++ .++++..
T Consensus 305 ~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~-np~i~~~~~~~~~v~~~~~ 383 (965)
T 3hhd_A 305 QELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSP-NPEIPALLDGRLQVVDQPL 383 (965)
T ss_dssp HHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSB-CTTCHHHHHTSEEECCSCE
T ss_pred HHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCC-CccCcccccCceeecCCCc
Confidence 9999999999753 3478999999999999999999999999999999999999999999 99985 4777888
Q ss_pred ccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 390 SININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 390 ~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+|+.++++||||||||+|+|+||+++
T Consensus 384 ~~~~~~a~v~sfG~gG~Nah~il~~~ 409 (965)
T 3hhd_A 384 PVRGGNVGINSFGFGGSNVHIILRPN 409 (965)
T ss_dssp ECCSCEEEEEEECTTSEEEEEEEEEC
T ss_pred cCCCCeEEEecccCCCceEEEEeccC
Confidence 99999999999999999999999974
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-72 Score=549.08 Aligned_cols=402 Identities=26% Similarity=0.366 Sum_probs=349.7
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCcccc--ccC--------CccccccccccccccCC---CCCCCCccCCCCC
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQS--NFS--------KNIIAKINNFNFKNSLN---KITDLSEKKKEFI 67 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~ 67 (415)
|||++|+|.++++||++|++|++++++++.++.. .|+ ..++.++++ +++ .+.+||+++| ++
T Consensus 8 ~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~fd~~~~-~~ 81 (431)
T 2ix4_A 8 LGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAA-----FVPYGSNPGEFDEALW-LN 81 (431)
T ss_dssp EEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEE-----CCCBSSSTTSBCHHHH-SC
T ss_pred eeEECCCCCCHHHHHHHHHcCCCeeeeCChhhhhccccccccccccccCcccceeE-----EeccccccccCChhhc-CC
Confidence 6999999999999999999999999999865421 111 133445555 343 3447998773 66
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHhCCC-CCCCCCcCCCcEEEEEecCCChhhHHHhhhhhh-hcCCCCCCchhhcccccc
Q psy5222 68 LHIAQKSPLFIQTSIIAALQAWYNSKL-HKKKYKILPERIGLIIAGHNTTQNYQYSLYPEF-LKKPEYLSPRYAIQFMDS 145 (415)
Q Consensus 68 ~~~~~~~~~~~~l~~~a~~~Al~dag~-~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 145 (415)
++ +|||+++|+++++++||+|||+ ++++ ++..++||++|+..+.....+..+..+ ..+...++|+.++.++.+
T Consensus 82 ~~---~~d~~~~l~l~aa~~AL~dAG~~~~~~--i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 156 (431)
T 2ix4_A 82 SK---AVANFIGYAVCAADEALRDAEWLPTEE--EEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVN 156 (431)
T ss_dssp ST---TCCHHHHHHHHHHHHHHHHTTCCCCSH--HHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTT
T ss_pred hh---hCCHHHHHHHHHHHHHHHHcCCCCccc--cCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhH
Confidence 65 8999999999999999999999 8888 888899999996544433222333333 355567899999999999
Q ss_pred hHHHHHHHHhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCc
Q psy5222 146 NQIGIMSEIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKT 225 (415)
Q Consensus 146 ~~a~~ia~~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 225 (415)
.+++++++.||++||+++|+++|+|++.||..|+++|++|++|+|||||+|.++++..+..|..++.++... ..+|++.
T Consensus 157 ~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~-~~~~~~~ 235 (431)
T 2ix4_A 157 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKF-NSSPQEA 235 (431)
T ss_dssp HHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTT-TTCGGGS
T ss_pred HHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccc-cCCcccc
Confidence 999999999999999999999999999999999999999999999999999888999999999999887531 1236778
Q ss_pred ccCCCCCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCC--CHHHHHHHHHHHHHHcCCCCCccc
Q psy5222 226 CRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEP--NLNNEISVMNSVLKQSGLKKNMID 303 (415)
Q Consensus 226 ~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~--~~~~~~~~~~~aL~~Agl~~~dId 303 (415)
|+|||.+++|+++||||+++||++.++|+++|.+|+++|+|++.++|+.+...| +..++.++++++|+++|++++|||
T Consensus 236 ~~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId 315 (431)
T 2ix4_A 236 SRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQID 315 (431)
T ss_dssp CCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred cccCCCCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcC
Confidence 999999999999999999999999999999999999999999999999887555 778999999999999999999999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHHhcCC--CceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCC
Q psy5222 304 YLNTHGSSSPLGDKIEISAIKEVYKNHF--SKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA 381 (415)
Q Consensus 304 ~v~~h~~gt~~~d~~E~~al~~~~~~~~--~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~ 381 (415)
||++|||||+.+|.+|..++.++|+... .++++++.|+++||+++|||++++++++++|+++.+||++|+++| +|.+
T Consensus 316 ~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~-~p~~ 394 (431)
T 2ix4_A 316 YVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNP-DPIF 394 (431)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSB-CTTC
T ss_pred EEEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCC-CCCC
Confidence 9999999999999999999999997532 368999999999999999999999999999999999999999999 9976
Q ss_pred C--cccCccccc-CCCEEEEeccCcCCceeEEEEeeC
Q psy5222 382 N--FSGKKSISI-NINNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 382 ~--~v~~~~~~~-~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+ +++.+.++| +.+++++|||||||+|+|+||++|
T Consensus 395 ~~~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~~ 431 (431)
T 2ix4_A 395 DKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFASI 431 (431)
T ss_dssp CSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CcccCCccccccCCCCEEEEecccCCCeeEEEEEeeC
Confidence 6 777778888 789999999999999999999986
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-70 Score=579.86 Aligned_cols=391 Identities=19% Similarity=0.244 Sum_probs=353.6
Q ss_pred CEEEeCcC-CCHHHHHHHHHcCCCceeeCCCcc-ccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHH
Q psy5222 1 MGIVSSIG-FDIASFSNSLIKGKSGIDYEINNT-QSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFI 78 (415)
Q Consensus 1 ~G~v~p~g-~~~~~~~~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (415)
|||++|+| .++++||++|++|+++++++|..+ +. .+...+.++ ++++++.||+.+|++++++.+.|||++
T Consensus 46 ~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~---~~~~~~~~~-----~l~~~~~fD~~~f~i~~~ea~~mdp~~ 117 (917)
T 2hg4_A 46 MACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWE---PDPDARLGG-----MLAAAGDFDAGFFGISPREALAMDPQQ 117 (917)
T ss_dssp EEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCC---CCSSCCEEB-----CCTTTTEECTGGGTCCHHHHHHSCHHH
T ss_pred ceEECCCCCCCHHHHHHHHHcCCCccccCCcccccC---CCCCcceee-----EecCccccChhhcCCCHHHHHhcCHHH
Confidence 79999987 789999999999999999998764 32 123355666 777888999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCC
Q psy5222 79 QTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIR 158 (415)
Q Consensus 79 ~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 158 (415)
+|+++++++||+|||+++++ ++..++|||+|+.... +..........+.++.+++...+.++++|++.||++
T Consensus 118 rl~leaa~eALedAGi~~~~--i~~~~~gV~vG~~~~d------~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~ 189 (917)
T 2hg4_A 118 RIMLEISWEALERAGHDPVS--LRGSATGVFTGVGTVD------YGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLE 189 (917)
T ss_dssp HHHHHHHHHHHHHTTCCGGG--GTTSCEEEEEEECCCC------CSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCChHH--cCCcceEEEEEeCCch------hhhhhhcCccccCcccccccccchHHHHHHHhcCCC
Confidence 99999999999999999999 9999999999965432 111122445556778888888899999999999999
Q ss_pred CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCccc
Q psy5222 159 GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIY 238 (415)
Q Consensus 159 Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~ 238 (415)
||+++|+++|+|++.||++|+++|++|+||++||||+|.++++..+..|..++.++ +++.|+|||.+++|+++
T Consensus 190 Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls-------~~g~~~pFd~~adG~~~ 262 (917)
T 2hg4_A 190 GPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLA-------ADGRCKPFSKAADGFGL 262 (917)
T ss_dssp SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBC-------TTSCCCTTBTTCCCBCB
T ss_pred CCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcC-------CccccCcccccccCCCC
Confidence 99999999999999999999999999999999999999988998888899999988 77899999999999999
Q ss_pred cceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCC
Q psy5222 239 GQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGD 316 (415)
Q Consensus 239 geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d 316 (415)
|||++++||++.++|+++|++|+++|+|++.++|+.+. +.|+..++.++++++|++||++++||||||+|||||+.+|
T Consensus 263 gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~gD 342 (917)
T 2hg4_A 263 AEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGD 342 (917)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTHH
T ss_pred cceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccCc
Confidence 99999999999999999999999999999999999876 7889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcC---CCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC------cccCc
Q psy5222 317 KIEISAIKEVYKNH---FSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN------FSGKK 387 (415)
Q Consensus 317 ~~E~~al~~~~~~~---~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~------~v~~~ 387 (415)
.+|..+|.++|+.. ..++++++.|+++||+++|+|+.++++++++|+++.|||++|+++| +|.++ .++++
T Consensus 343 ~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~-~p~i~~~~~~~~v~~~ 421 (917)
T 2hg4_A 343 PIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEP-SPQIEWDLGAVSVVSQ 421 (917)
T ss_dssp HHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSB-CTTSCC---CCEECCS
T ss_pred HHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCC-CccCCccccceeecCC
Confidence 99999999999753 2468999999999999999999999999999999999999999999 99986 37778
Q ss_pred ccccC----CCEEEEeccCcCCceeEEEEeeC
Q psy5222 388 SISIN----INNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 388 ~~~~~----~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
.++|+ +++++||||||||+|+|+||+++
T Consensus 422 ~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~ 453 (917)
T 2hg4_A 422 ARSWPAGERPRRAGVSSFGISGTNAHVIVEEA 453 (917)
T ss_dssp CEECCCCSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred cccCCCCCCCCEEEEeeecCCCceEEEEeccC
Confidence 88885 58999999999999999999874
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-70 Score=576.14 Aligned_cols=393 Identities=16% Similarity=0.189 Sum_probs=352.2
Q ss_pred CEEEeCcC-CCHHHHHHHHHcCCCceeeCCCcc-cc--ccCCcc-------ccccccccccccCCCCCCCCccCCCCCHH
Q psy5222 1 MGIVSSIG-FDIASFSNSLIKGKSGIDYEINNT-QS--NFSKNI-------IAKINNFNFKNSLNKITDLSEKKKEFILH 69 (415)
Q Consensus 1 ~G~v~p~g-~~~~~~~~~l~~g~~~~~~~~~~~-~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 69 (415)
|||++|+| .++++||++|++|+++++++|..+ ++ .|+++. ..+.++ |+++++.||+.+|+++++
T Consensus 13 ~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~l~~~~~FD~~~f~i~~~ 87 (915)
T 2qo3_A 13 MACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGG-----FLDDAAGFDAEFFGVSPR 87 (915)
T ss_dssp EEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEB-----CCSCSSEECHHHHTCCHH
T ss_pred eEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeE-----EeCCccccCHhhcCCCHH
Confidence 79999998 999999999999999999998875 43 233222 233444 788888999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHH
Q psy5222 70 IAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIG 149 (415)
Q Consensus 70 ~~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 149 (415)
+.+.|||+++|+++++++||+|||+++++ ++..++|||+|+....... .......++++.+++...+++++
T Consensus 88 ea~~mdp~~rL~leaa~eALedAGi~~~~--i~~~~~gV~vG~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~a~ 158 (915)
T 2qo3_A 88 EAAAMDPQQRLLLETSWELVENAGIDPHS--LRGTATGVFLGVAKFGYGE-------DTAAAEDVEGYSVTGVAPAVASG 158 (915)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHTTCCGGG--GTTBCCEEEEECCCCCTTT-------TCC---CTTCHHHHTTCHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHcCCChHH--cCCcceEEEEEecCchHHh-------hhcccccccccccccccccHHHH
Confidence 99999999999999999999999999999 9999999999955432211 01334456788888889999999
Q ss_pred HHHHHhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCC
Q psy5222 150 IMSEIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPF 229 (415)
Q Consensus 150 ~ia~~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pf 229 (415)
+|++.||++||+++|+++|+|++.||+.|+++|++|+||++||||+|.++++..+..|..++.++ +++.|+||
T Consensus 159 ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls-------~~g~~~~F 231 (915)
T 2qo3_A 159 RISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALA-------ADGRSKAF 231 (915)
T ss_dssp HHHHHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBC-------SSCCCCTT
T ss_pred HHHHHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccC-------CCCCcccc
Confidence 99999999999999999999999999999999999999999999999888999999999999988 67789999
Q ss_pred CCCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEe
Q psy5222 230 DKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNT 307 (415)
Q Consensus 230 d~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~ 307 (415)
|.+++|+++|||++++||++.++|+++|++|+++|+|++.++|+.+. +.|+..++.++|+++|++||++++||||||+
T Consensus 232 d~~adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~ 311 (915)
T 2qo3_A 232 GAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEA 311 (915)
T ss_dssp BTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEEC
T ss_pred cCCCCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEe
Confidence 99999999999999999999999999999999999999999999876 7889999999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHhcC---CCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--
Q psy5222 308 HGSSSPLGDKIEISAIKEVYKNH---FSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN-- 382 (415)
Q Consensus 308 h~~gt~~~d~~E~~al~~~~~~~---~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~-- 382 (415)
|||||+.+|..|..+|.++|+.. ..++++++.|+++||+++|||+.++++++++|+++.|||++|+++| +|.++
T Consensus 312 HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~-~p~~~~~ 390 (915)
T 2qo3_A 312 HGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEP-TPHVDWS 390 (915)
T ss_dssp CCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSB-CTTSCCS
T ss_pred cCCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCC-Ccccccc
Confidence 99999999999999999999753 2468999999999999999999999999999999999999999999 99887
Q ss_pred ----cccCcccccC----CCEEEEeccCcCCceeEEEEeeC
Q psy5222 383 ----FSGKKSISIN----INNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 383 ----~v~~~~~~~~----~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
.++.+..+|+ +++++||||||||+|+|+||+++
T Consensus 391 ~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~ 431 (915)
T 2qo3_A 391 SGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEA 431 (915)
T ss_dssp SSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred cCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeec
Confidence 4566677774 58999999999999999999874
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-69 Score=621.04 Aligned_cols=388 Identities=19% Similarity=0.272 Sum_probs=350.4
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
|||++|+|.++++||++|.+|++++++.+..|..+++ .. ....+ +++++..||+.+|++++++.+.|||+++|
T Consensus 9 ~~~~~p~~~~~~~~w~~l~~g~~~~~~~~~~~~~~~~-~~-~~~~g-----~~~~~~~fd~~~f~i~~~ea~~~dpq~rl 81 (2512)
T 2vz8_A 9 MSGKLPESENLEEFWANLIGGVDMVTADDRRWKAGLY-GL-PRRMG-----KLKDLSRFDASFFGVHSKQANTMDPQLRM 81 (2512)
T ss_dssp EEEEBTTBSSHHHHHHHHHTTCCCEEECSSSSCTTGG-GC-CSEEE-----CCSCSSCCCTTTTTCCHHHHHTSCHHHHH
T ss_pred eeeeCCCCCCHHHHHHHHHcCCccccCCCcccccccc-cC-cccce-----ecCCcccCCHhhcCCCHHHHHhcCHHHHH
Confidence 7999999999999999999999999996543322211 11 12223 56678889999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCCCc
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGE 160 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp 160 (415)
++++++|||+|||+++.. +++.++|||+|.+.+. +...+..++..++++.++++..++++++|++.||++||
T Consensus 82 ~l~~~~eAle~Ag~~~~~--~~~~~~gv~~G~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~Gp 153 (2512)
T 2vz8_A 82 LLEVTYEAIVDGGINPAS--LRGTSTGVWVGVSSSD------ASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKGP 153 (2512)
T ss_dssp HHHHHHHHHGGGTCCGGG--GTTCSCEEEEEECCCH------HHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCCSC
T ss_pred HHHHHHHHHHHCCCChhh--cCCCCeEEEEEeccHH------HHHHHhcCccccCcceecccchhHHHHHHHHHhCCCCC
Confidence 999999999999999988 8999999999966542 22223456667889999999999999999999999999
Q ss_pred cccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCccccc
Q psy5222 161 GFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYGQ 240 (415)
Q Consensus 161 ~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~ge 240 (415)
+++|+++|+||+.||++|+++|++|+||++||||++..++|..+..|.++++++ |+++|+|||.+++|+++||
T Consensus 154 s~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls-------~~g~c~~Fd~~adG~~~gE 226 (2512)
T 2vz8_A 154 SITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLS-------QDGTCRSFDAEGTGYCRAE 226 (2512)
T ss_dssp EEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBC-------TTCSCCSSSTTCCCBCBBC
T ss_pred ceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCC-------CCCCCCCCCCCCCCcceee
Confidence 999999999999999999999999999999999999999999999999999999 7789999999999999999
Q ss_pred eEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCC---CCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCH
Q psy5222 241 ASAALLIEGNKNIKILNKSYLARLLGGVINLHATA---SPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317 (415)
Q Consensus 241 Ga~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~---~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~ 317 (415)
|++++|||+.++|+ +|||+|+|++.++||.+ .+.|++.++.++|++||++||++|+||+|||+|||||+.+|.
T Consensus 227 G~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT~~gD~ 302 (2512)
T 2vz8_A 227 AVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDP 302 (2512)
T ss_dssp EEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCCTTHHH
T ss_pred eEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCCCCCCH
Confidence 99999999999985 59999999999999964 388999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC-CCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC-------cccCccc
Q psy5222 318 IEISAIKEVYKNH-FSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN-------FSGKKSI 389 (415)
Q Consensus 318 ~E~~al~~~~~~~-~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~-------~v~~~~~ 389 (415)
+|..||.++|+.. ..+++|+|.|+++||+++|||++++++++++|++++|||++|+++| +|.++ .++++..
T Consensus 303 ~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~-~p~~~~~~~~~~~~~~~~~ 381 (2512)
T 2vz8_A 303 QELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTP-NPEIPALQDGRLQVVDRPL 381 (2512)
T ss_dssp HHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSC-CTTSSSSSSSSCEECCSCC
T ss_pred HHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCC-CccccccccCceEecCCCc
Confidence 9999999999753 3478999999999999999999999999999999999999999999 99885 4667888
Q ss_pred ccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 390 SININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 390 ~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+|+.++++||||||||+|+|+||+++
T Consensus 382 ~~~~~~a~vnsfG~gG~Nah~il~~~ 407 (2512)
T 2vz8_A 382 PIRGGNVGINSFGFGGSNVHVILQPN 407 (2512)
T ss_dssp BCCSCCEEEEEEETTTEEEEEEEEEC
T ss_pred cCCCCeEEEeccCCCCceeEEEEccC
Confidence 99888999999999999999999864
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-61 Score=525.71 Aligned_cols=386 Identities=16% Similarity=0.148 Sum_probs=330.1
Q ss_pred CCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCC-CCCccCCCCCHHHHhcCCHHHHHHHHHHHH
Q psy5222 9 FDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKIT-DLSEKKKEFILHIAQKSPLFIQTSIIAALQ 87 (415)
Q Consensus 9 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~l~~~a~~~ 87 (415)
.+.++||++|++|++++.+.+. .++.++++ +++ +||+.+|+|++++.+.|||+++|++.++++
T Consensus 1158 ~~~~~~w~~L~~G~~~i~p~~~--------~~~~~~aG--------~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~e 1221 (1887)
T 2uv8_A 1158 PETGEYSVKLLKGATLYIPKAL--------RFDRLVAG--------QIPTGWNAKTYGISDDIISQVDPITLFVLVSVVE 1221 (1887)
T ss_dssp TTTSCEEEEECTTCEEEEEEEE--------CCSCCEEE--------CCCTTCCTTTTTCCHHHHHHSCHHHHHHHHHHHH
T ss_pred CchHHHHHHHHcCCceeecccC--------CCCccEEE--------EECCCCChhhcCCCHHHHHhcCHHHHHHHHHHHH
Confidence 4578999999999999987422 45567777 665 899999999999999999999999999999
Q ss_pred HHHhCCCC-CCCC--CcCCCcEEEEEecCCCh-hhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHH-hCCCCccc
Q psy5222 88 AWYNSKLH-KKKY--KILPERIGLIIAGHNTT-QNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEI-FNIRGEGF 162 (415)
Q Consensus 88 Al~dag~~-~~~~--~~~~~~~gv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~-lgl~Gp~~ 162 (415)
||++||++ +.++ .++..++|+++|+..+. ......+...+.. ..+.+..++.++.|.+++++++. ||++||++
T Consensus 1222 AL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~--~~v~~~~~~~~~~n~~aa~is~~~lgl~GP~~ 1299 (1887)
T 2uv8_A 1222 AFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKD--EPVQNDILQESFINTMSAWVNMLLISSSGPIK 1299 (1887)
T ss_dssp HHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTT--CCCCTTHHHHHSTTHHHHHHHHHTTCCCSCCC
T ss_pred HHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhc--CCCCcchhhcchhhHHHHHHHHHHcCCccceE
Confidence 99999995 4330 14678999999955444 3333223222222 23778888888999999999995 99999999
Q ss_pred cccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCC----CCCCCCCcccCCCCCCCCccc
Q psy5222 163 IIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKN----FYNFPKKTCRPFDKLAEGFIY 238 (415)
Q Consensus 163 ~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~----~~~~~~~~~~pfd~~~~G~~~ 238 (415)
+++++|+||+.||+.|++.|++|+||+|||||+|. +++..+..|..++.++... ...+|++.|||||.+++||++
T Consensus 1300 tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~-~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~RPfd~~r~Gfv~ 1378 (1887)
T 2uv8_A 1300 TPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFME 1378 (1887)
T ss_dssp CCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCCTTBTTCCSBCB
T ss_pred EeecccccHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhcccCCCccCcCCCcccCCCccc
Confidence 99999999999999999999999999999999994 8999999999999998420 012377899999999999999
Q ss_pred cceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCC------------------HH----------------
Q psy5222 239 GQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPN------------------LN---------------- 282 (415)
Q Consensus 239 geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~------------------~~---------------- 282 (415)
|||++++||++.++|+++|++||++|+|+++++|+.+. +.|. ..
T Consensus 1379 gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld~~~r~~ql~~~~~~ 1458 (1887)
T 2uv8_A 1379 AQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQ 1458 (1887)
T ss_dssp BCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGCHHHHHHHHHHHHHH
T ss_pred ccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCCCcccchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998765 3332 10
Q ss_pred ---------------------------HH-------------------------------HHHHHHHHHHcCCCCCcccE
Q psy5222 283 ---------------------------NE-------------------------------ISVMNSVLKQSGLKKNMIDY 304 (415)
Q Consensus 283 ---------------------------~~-------------------------------~~~~~~aL~~Agl~~~dId~ 304 (415)
.+ ..+|++||+++|++++||||
T Consensus 1459 i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ALa~AGl~p~DId~ 1538 (1887)
T 2uv8_A 1459 IKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGV 1538 (1887)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHHHHHTTTCCGGGEEE
T ss_pred HHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHHHHHHcCCCHHHceE
Confidence 12 36899999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhc----CCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCC
Q psy5222 305 LNTHGSSSPLGDKIEISAIKEVYKN----HFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQ 380 (415)
Q Consensus 305 v~~h~~gt~~~d~~E~~al~~~~~~----~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~ 380 (415)
|++|||||+.+|.+|..+|.++|+. ...++++++.|+++||+.||||++++++++++|++|+|||++|++++ +|.
T Consensus 1539 veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~iPpt~n~d~~-dp~ 1617 (1887)
T 2uv8_A 1539 ASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNV-DKI 1617 (1887)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCEECCCTTCSSB-CGG
T ss_pred EEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCCcCCcCCCCCC-CCc
Confidence 9999999999999999999999974 12369999999999999999999999999999999999999999999 998
Q ss_pred CC---c--ccCccccc-CCCEEEEeccCcCCceeEEEEee
Q psy5222 381 AN---F--SGKKSISI-NINNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 381 ~~---~--v~~~~~~~-~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
++ + ++.+..+| .++++++|||||||+|+|+||++
T Consensus 1618 l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~ 1657 (1887)
T 2uv8_A 1618 LEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVH 1657 (1887)
T ss_dssp GGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred cccccccccccccccCCCCCEEEEccCCCCCccEEEEEec
Confidence 73 3 36677777 58999999999999999999985
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-61 Score=525.56 Aligned_cols=388 Identities=15% Similarity=0.135 Sum_probs=329.9
Q ss_pred CCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCC-CCCccCCCCCHHHHhcCCHHHHHHHHHHH
Q psy5222 8 GFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKIT-DLSEKKKEFILHIAQKSPLFIQTSIIAAL 86 (415)
Q Consensus 8 g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~l~~~a~~ 86 (415)
..+.++||++|++|++++.+.. . .+..++++ +++ +||+.+|+|++++.+.|||+++|++.++.
T Consensus 1132 ~~~~~~~w~~L~~G~~~i~p~~----~----~~~~~~aG--------~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~ 1195 (1878)
T 2uv9_A 1132 IPETGQYTVRLRKGATLLIPKA----L----QFDRLVAG--------QIPTGWDARRYGVPEDIIQQVDPVTLYVLVSVA 1195 (1878)
T ss_dssp CTTTSCEEEEECTTCEEEEEEE----E----CCSCCEEE--------ECCTTCCHHHHTCCHHHHHHSCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHcCCCeeeecC----C----CCcceEEE--------EeCCCCCHhhcCCCHHHHHhcCHHHHHHHHHHH
Confidence 3566899999999999998732 2 45567777 565 89999999999999999999999999999
Q ss_pred HHHHhCCCC-CCCC--CcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHH-hCCCCccc
Q psy5222 87 QAWYNSKLH-KKKY--KILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEI-FNIRGEGF 162 (415)
Q Consensus 87 ~Al~dag~~-~~~~--~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~-lgl~Gp~~ 162 (415)
+||++||++ +.++ .++..++|+++|+..+.......++.....+ ..+.+..++.++.|.+++++++. ||++||++
T Consensus 1196 eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~-~~v~~~~~~~~~~n~~aa~vs~~~lg~~GP~~ 1274 (1878)
T 2uv9_A 1196 EALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLD-KPVQKDILQESFVNTMAAWVNMLLLSSTGPIK 1274 (1878)
T ss_dssp HHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTT-CCCCSCTTGGGSHHHHHHHHHHHTCCCCCCBC
T ss_pred HHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhc-CCCCchhhhcchHHHHHHHHHHHhcCCCCCeE
Confidence 999999997 4430 0467899999995544433322333322222 23778888889999999999995 99999999
Q ss_pred cccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCC----CCCCCCCcccCCCCCCCCccc
Q psy5222 163 IIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKN----FYNFPKKTCRPFDKLAEGFIY 238 (415)
Q Consensus 163 ~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~----~~~~~~~~~~pfd~~~~G~~~ 238 (415)
+++++|+|++.||+.|++.|++|+||+|||||+|. +++..+..|..++.++... ...+|++.||||+.+++||++
T Consensus 1275 tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPfd~~r~Gfv~ 1353 (1878)
T 2uv9_A 1275 TPVGACATAVESLDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTSTTRNGFME 1353 (1878)
T ss_dssp CBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSSBTTCCCBCB
T ss_pred EEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhhcCCCcccCcCCCccCCCCCcc
Confidence 99999999999999999999999999999999995 8999999999999998421 012478999999999999999
Q ss_pred cceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCC----------------H-------------------
Q psy5222 239 GQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPN----------------L------------------- 281 (415)
Q Consensus 239 geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~----------------~------------------- 281 (415)
|||++++||++.++|+++|++||++|.|+++++|+.+. +.|. .
T Consensus 1354 gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~~r~~~~~~~~~~i~ 1433 (1878)
T 2uv9_A 1354 SQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQIK 1433 (1878)
T ss_dssp BCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHHHHHHHHHHHHHHHH
T ss_pred cceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCcccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998765 4441 0
Q ss_pred --------------------------------HHHH-------------------------------HHHHHHHHHcCCC
Q psy5222 282 --------------------------------NNEI-------------------------------SVMNSVLKQSGLK 298 (415)
Q Consensus 282 --------------------------------~~~~-------------------------------~~~~~aL~~Agl~ 298 (415)
..+. .+|++||+++|++
T Consensus 1434 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ALa~aGl~ 1513 (1878)
T 2uv9_A 1434 QWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRGALATWGLT 1513 (1878)
T ss_dssp HHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHHHHHTTTCC
T ss_pred HhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHcCCC
Confidence 0122 7899999999999
Q ss_pred CCcccEEEecCCCCCCCCHHHHHHHHHHHhc----CCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCC
Q psy5222 299 KNMIDYLNTHGSSSPLGDKIEISAIKEVYKN----HFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLE 374 (415)
Q Consensus 299 ~~dId~v~~h~~gt~~~d~~E~~al~~~~~~----~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~ 374 (415)
++|||||++|||||+.+|.+|..+|.++|+. ...++++++.|+++||+.||+|++++++++++|++|+|||++|++
T Consensus 1514 ~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~g~iPp~~n~d 1593 (1878)
T 2uv9_A 1514 IDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGIVPGNRNAD 1593 (1878)
T ss_dssp GGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTTCEECCCTTCC
T ss_pred HHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhcCCCCCCCCCC
Confidence 9999999999999999999999999999975 124699999999999999999999999999999999999999999
Q ss_pred CCCCCCCC---cc--cCccccc-CCCEEEEeccCcCCceeEEEEee
Q psy5222 375 SPIDNQAN---FS--GKKSISI-NINNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 375 ~~~~~~~~---~v--~~~~~~~-~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
++ +|.++ ++ +.+..++ .++++++|||||||+|+|+|++.
T Consensus 1594 ~~-dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~ 1638 (1878)
T 2uv9_A 1594 NV-DKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVH 1638 (1878)
T ss_dssp SB-CGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CC-CCccccccccccccccccCCCCCEEEEccCCCCCeeEEEEEec
Confidence 99 99873 33 5555555 47999999999999999999985
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-63 Score=523.04 Aligned_cols=387 Identities=16% Similarity=0.149 Sum_probs=327.6
Q ss_pred CCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCC-CCCccCCCCCHHHHhcCCHHHHHHHHHHHH
Q psy5222 9 FDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKIT-DLSEKKKEFILHIAQKSPLFIQTSIIAALQ 87 (415)
Q Consensus 9 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~l~~~a~~~ 87 (415)
.+.++||++|++|++.+.+.. . .++.++++ +++ +||+.+|++++++.+.|||+++|+++++++
T Consensus 959 ~~~eefW~~L~~G~~~i~p~~----~----~~~~~vaG--------~Ip~gFD~~~fGIs~~ea~~mDP~qrLaLeAa~E 1022 (1688)
T 2pff_A 959 PETGEYSVKLLKGATLYIPKA----L----RFDRLVAG--------QIPTGWNAKTYGISDDIISQVDPITLFVLVSVVE 1022 (1688)
T ss_dssp CCCCSSSCCCCCCTTCCCCCC----C----CEECCSSC--------SCCCCCCCCCSSCCTTTBTTBCSSTTHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEecCC----C----CCCceEEE--------EECCCCChhhCCCCHHHHhccCHHHHHHHHHHHH
Confidence 356899999999999988732 2 45667788 665 899999999999999999999999999999
Q ss_pred HHHhCCCC-CCCC--CcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHH-HhCCCCcccc
Q psy5222 88 AWYNSKLH-KKKY--KILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSE-IFNIRGEGFI 163 (415)
Q Consensus 88 Al~dag~~-~~~~--~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~-~lgl~Gp~~~ 163 (415)
||++||++ +.++ .++..++|+++|+..+.......++.....+ ..+++..++.++.|.+++++++ .||++||+++
T Consensus 1023 ALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~-~~v~~~~l~~~~~nt~Aa~Vs~~~LGl~GPs~T 1101 (1688)
T 2pff_A 1023 AFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKD-EPVQNDILQESFINTMSAWVNMLLISSSGPIKT 1101 (1688)
T ss_dssp HHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSC-CCCCSTTHHHHCTHHHHHHHHHSSCCCCCCCCC
T ss_pred HHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhc-CCCCcchhccccHHHHHHHHHHHHcCCcCCeEE
Confidence 99999997 4431 1467899999995544332222222222211 2367788888899999999999 7999999999
Q ss_pred ccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCC----CCCCCCcccCCCCCCCCcccc
Q psy5222 164 IGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNF----YNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 164 v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~----~~~~~~~~~pfd~~~~G~~~g 239 (415)
++++|+||+.||..|+++|++|+||+|||||+|. +++..+..|..++.++.... ...|++.|||||.+++|+++|
T Consensus 1102 VdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~-msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd~~rdGfv~G 1180 (1688)
T 2pff_A 1102 PVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEA 1180 (1688)
T ss_dssp CCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCC-CCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSSSSCCCCCCC
T ss_pred ecCCCchHHHHHHHHHHHHHCCCCCEEEEeeecc-CCHHHHHHHHhccccccChhhhhcCCChhhccCcCccCCCCCccc
Confidence 9999999999999999999999999999999995 67877888999998884311 134788999999999999999
Q ss_pred ceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCC------------------HH-----------------
Q psy5222 240 QASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPN------------------LN----------------- 282 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~------------------~~----------------- 282 (415)
||++++||++.++|+++|++||++|.|+++++|+.+. +.|. ..
T Consensus 1181 EGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~ld~~~R~rql~~~~~~i 1260 (1688)
T 2pff_A 1181 QGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQI 1260 (1688)
T ss_dssp SCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCSCTTCCHHHHSHHHHHH
T ss_pred cceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCcccChHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999997654 3331 00
Q ss_pred --------------------------HH-------------------------------HHHHHHHHHHcCCCCCcccEE
Q psy5222 283 --------------------------NE-------------------------------ISVMNSVLKQSGLKKNMIDYL 305 (415)
Q Consensus 283 --------------------------~~-------------------------------~~~~~~aL~~Agl~~~dId~v 305 (415)
.+ ..+|++||+++|++++|||||
T Consensus 1261 ~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGLtpdDIdyV 1340 (1688)
T 2pff_A 1261 KDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVA 1340 (1688)
T ss_dssp HHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCSSTTCCCCC
T ss_pred HHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCCCHHHeeEE
Confidence 12 368999999999999999999
Q ss_pred EecCCCCCCCCHHHHHHHHHHHhcC----CCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCC
Q psy5222 306 NTHGSSSPLGDKIEISAIKEVYKNH----FSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQA 381 (415)
Q Consensus 306 ~~h~~gt~~~d~~E~~al~~~~~~~----~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~ 381 (415)
|+|||||+.+|.+|..+|.++|+.. ..++++++.|+++||+.||||++++++++++|++|+|||++|++++ +|.+
T Consensus 1341 EaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G~IPptln~d~p-dp~l 1419 (1688)
T 2pff_A 1341 SFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNV-DKIL 1419 (1688)
T ss_dssp CCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTCCCCCCSCCSCC-CTTC
T ss_pred EEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcCCCCCCCCCCCC-CCCC
Confidence 9999999999999999999999751 2368999999999999999999999999999999999999999999 9988
Q ss_pred C---cc--cCccccc-CCCEEEEeccCcCCceeEEEEee
Q psy5222 382 N---FS--GKKSISI-NINNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 382 ~---~v--~~~~~~~-~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+ ++ +.+..+| +++++++|||||||+|+|+|+++
T Consensus 1420 ~~~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~ 1458 (1688)
T 2pff_A 1420 EQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVH 1458 (1688)
T ss_dssp CSSCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEEC
T ss_pred CcCCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeC
Confidence 4 33 6677777 58999999999999999999985
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-59 Score=534.13 Aligned_cols=363 Identities=17% Similarity=0.182 Sum_probs=313.5
Q ss_pred cccccccccccccCCCC-CCCCccCCCCCHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCc----CCCcEEEEEecCC
Q psy5222 40 IIAKINNFNFKNSLNKI-TDLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKI----LPERIGLIIAGHN 114 (415)
Q Consensus 40 ~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~----~~~~~gv~~g~~~ 114 (415)
++.++++ .+ ++||+.+|+|++++.+.|||+++|+++++++||+|||+++++ + ++.++||++|+..
T Consensus 2617 ~~~~~gG--------~i~d~FD~~~fgIs~rea~~mDp~~rL~l~aa~eALedAGi~p~~--l~~~~~~~~vGV~vG~~~ 2686 (3089)
T 3zen_D 2617 LSRTVGA--------QIPTGFDPTVWGISPDMASSIDRVALWNIVATVDAFLSSGFTPTE--LMRWVHPSQVASTQGTGM 2686 (3089)
T ss_dssp CSCCEEE--------CCCTTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHTTSCSCGGG--HHHHSCGGGEEEEEEESS
T ss_pred ccceEEE--------EcCCCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCHHH--hhcccCcceeEEEEeecC
Confidence 4556666 45 489999999999999999999999999999999999999887 6 6899999999554
Q ss_pred ChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHH-hCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEe
Q psy5222 115 TTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEI-FNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLII 193 (415)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~-lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvg 193 (415)
+........+..+..+....++ .++..+.|..++++++. +|++||+++|+++|+||+.||+.|+++|++|+||++|||
T Consensus 2687 gg~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~aa~is~~~lGl~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaG 2765 (3089)
T 3zen_D 2687 GGMTSMQTMYHGNLLGRAKPND-ILQEVLPNVVAAHVMQSYVGGYGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAG 2765 (3089)
T ss_dssp CCHHHHHHHHHHHHTTCCCCTT-HHHHTSTTHHHHHHHHHTTCCCSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred ccHHHHHHHHHHHhcCCCccch-hhccccccHHHHHHHHHHcCCCCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEe
Confidence 4333322333333334433333 56778889999999875 599999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHcccccCC----CCCCCCCCcccCCCCCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEe
Q psy5222 194 SAMTDLSPMEIQAFHAIGAMGGK----NFYNFPKKTCRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVI 269 (415)
Q Consensus 194 g~e~~~~~~~~~~~~~~~~ls~~----~~~~~~~~~~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~ 269 (415)
|+|. +++..+..|..++.++.. ....+|++.|+|||.+++|+++|||++++||++.++|+++|++||++|.+.+.
T Consensus 2766 Gve~-ls~~~~~~f~~~~als~~~~~~~~~~sp~~~crpFd~~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~ 2844 (3089)
T 3zen_D 2766 GFDD-LTLEAIIGFGDMAATADTEMMRAKGISDSKFSRANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQS 2844 (3089)
T ss_dssp EEEC-CCHHHHHHHHHHTCBCCHHHHHHTTCCTTTSCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEE
T ss_pred eecc-cCHHHHHHHHHhhhhhcchhhhhccCCcccccCccccCCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEE
Confidence 9996 899999999999988731 01124789999999999999999999999999999999999999999999999
Q ss_pred ccCCCCC--CCCCH-------HHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHH---HHHHHHhcCC-Cceee
Q psy5222 270 NLHATAS--PEPNL-------NNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEIS---AIKEVYKNHF-SKLLL 336 (415)
Q Consensus 270 ~~~~~~~--~~~~~-------~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~---al~~~~~~~~-~~~~v 336 (415)
++|+.+. +.|+. .++.++|+++|++||++++||||||+|||||+.+|.+|.. ++.+.|+... .++++
T Consensus 2845 n~Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v 2924 (3089)
T 3zen_D 2845 FADGVHTSIPAPGLGALGAARGGRESTLARSLAQLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFI 2924 (3089)
T ss_dssp ECCCCCCCSSCCCCGGGGGSTTGGGSHHHHHHHTTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEE
T ss_pred ecCCcccCccCCchhHHhHhhhhHHHHHHHHHHHcCCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCccee
Confidence 9999887 55542 3667899999999999999999999999999999999999 6778887653 57999
Q ss_pred eecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC-----cccCcccccC----CCEEEEeccCcCCce
Q psy5222 337 NSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN-----FSGKKSISIN----INNVMSNSFGFSGIN 407 (415)
Q Consensus 337 ~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~-----~v~~~~~~~~----~~~~~v~s~g~gG~~ 407 (415)
++.|+++||++||||++++++++++|++++|||++|++++ +|.++ .++++..+|+ ++++++|||||||+|
T Consensus 2925 ~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPpt~~~~~~-np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~N 3003 (3089)
T 3zen_D 2925 VSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPNRSLDCV-DDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVS 3003 (3089)
T ss_dssp ECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCCCTTCSSB-CGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEE
T ss_pred cccccccCCchhhhhHHHHHHHHHHHhcCccCCCCCCCCC-CCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCe
Confidence 9999999999999999999999999999999999999999 99876 3556777774 689999999999999
Q ss_pred eEEEEeeC
Q psy5222 408 SSIILCKK 415 (415)
Q Consensus 408 ~~~vl~~~ 415 (415)
+|+||+++
T Consensus 3004 ahvVle~~ 3011 (3089)
T 3zen_D 3004 GLVALVHP 3011 (3089)
T ss_dssp EEEEEECG
T ss_pred EEEEEecC
Confidence 99999864
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=287.44 Aligned_cols=271 Identities=12% Similarity=0.084 Sum_probs=215.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..+|+++++++||+|+|+++++ ++ ++++|+..+... ...++.+++..+|
T Consensus 30 ~~~L~~~a~~~Al~dAGl~~~~--id----~v~~g~~~~~~~-------------------------~~~~a~~ia~~lg 78 (397)
T 1wl4_A 30 VQDLGSTVIKEVLKRATVAPED--VS----EVIFGHVLAAGC-------------------------GQNPVRQASVGAG 78 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSCCTTS-------------------------CSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecCCCCC-------------------------CCHHHHHHHHHcC
Confidence 3689999999999999999888 77 688884432110 1257889999999
Q ss_pred C--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH---------------H-----HH----H--H
Q psy5222 157 I--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME---------------I-----QA----F--H 208 (415)
Q Consensus 157 l--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~---------------~-----~~----~--~ 208 (415)
+ ++|+++|+++|+|++.||..|+++|++|++|+|||||+|.+..... + .+ | .
T Consensus 79 l~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 158 (397)
T 1wl4_A 79 IPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNC 158 (397)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCC
T ss_pred CCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccc
Confidence 9 8999999999999999999999999999999999999996542100 0 00 0 0
Q ss_pred Hccccc-----------------------------------------------------CCCCCCCCCC--------ccc
Q psy5222 209 AIGAMG-----------------------------------------------------GKNFYNFPKK--------TCR 227 (415)
Q Consensus 209 ~~~~ls-----------------------------------------------------~~~~~~~~~~--------~~~ 227 (415)
.++.++ .+. .+.. .+|
T Consensus 159 ~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~---~~r~~~t~e~~~~~r 235 (397)
T 1wl4_A 159 HMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDE---FPRHGSNIEAMSKLK 235 (397)
T ss_dssp BHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCS---CCCTTCCHHHHHTSC
T ss_pred hHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeecccc---ccCCCCCHHHHhcCC
Confidence 011100 000 0111 488
Q ss_pred C-CCCCCCCcc-------ccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCC
Q psy5222 228 P-FDKLAEGFI-------YGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKK 299 (415)
Q Consensus 228 p-fd~~~~G~~-------~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~ 299 (415)
| ||.+++|++ ++|||+++||++++.|+++|.+|+++|.|++.++.. +.+...++..+++++|+++|+++
T Consensus 236 pvfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~---p~~~~~~~~~a~~~al~~Agl~~ 312 (397)
T 1wl4_A 236 PYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVE---PSIMGIGPIPAIKQAVTKAGWSL 312 (397)
T ss_dssp CSSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECC---GGGGGGTHHHHHHHHHHHHTCCG
T ss_pred CccCCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecC---hhhccchHHHHHHHHHHHcCCCH
Confidence 9 999999999 999999999999999999999999999999988742 22345678899999999999999
Q ss_pred CcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCC
Q psy5222 300 NMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDN 379 (415)
Q Consensus 300 ~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~ 379 (415)
+||||||+|+..+ ....++.+.|+....++++++.|..+||++||+|+.++++++++|+++
T Consensus 313 ~dId~ie~~d~f~-----~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~-------------- 373 (397)
T 1wl4_A 313 EDVDIFEINEAFA-----AVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERM-------------- 373 (397)
T ss_dssp GGCCEEEECCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--------------
T ss_pred HHCCEEEEecccH-----HHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc--------------
Confidence 9999999885543 233557778876555789999999999999999999999999999974
Q ss_pred CCCcccCcccccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 380 QANFSGKKSISININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 380 ~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
..++++++..+-||.+.++||++.
T Consensus 374 ------------~~~~gl~~~~~ggG~~~a~~~e~~ 397 (397)
T 1wl4_A 374 ------------GRSRGVAALCIGGGMGIAMCVQRE 397 (397)
T ss_dssp ------------TCCEEEEEEEETTTEEEEEEEEEC
T ss_pred ------------CCCEEEEEEecccchheEEEEEeC
Confidence 136788888777999999999863
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-35 Score=283.28 Aligned_cols=274 Identities=14% Similarity=0.051 Sum_probs=215.1
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 77 FIQTSIIAALQAWYNS-KLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 77 ~~~l~~~a~~~Al~da-g~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
..+|+++++++||+|+ |+++++ ++ ++++|+..+... ..+.++.+++..+
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~--id----~v~~g~~~~~~~------------------------~~~~~a~~ia~~l 79 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGE--VE----DVIWGCVNQTLE------------------------QGWNIARMASLMT 79 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGG--EE----EEEEECSSBSBT------------------------TTTTHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhccCCCHHH--CC----EEEEEeeccccC------------------------CCCcHHHHHHHHc
Confidence 5689999999999999 998887 66 788885432110 0136788999999
Q ss_pred CC--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCC-HHHHH-----HHH--------Hccc-------
Q psy5222 156 NI--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLS-PMEIQ-----AFH--------AIGA------- 212 (415)
Q Consensus 156 gl--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~-~~~~~-----~~~--------~~~~------- 212 (415)
|+ ++|+++++++|+|++.||..|+++|++|++|+|||+|+|.+.. +.... .+. .++.
T Consensus 80 gl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 159 (390)
T 1wdk_C 80 QIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGK 159 (390)
T ss_dssp SSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHH
T ss_pred CCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHHH
Confidence 99 8999999999999999999999999999999999999995432 11000 000 0011
Q ss_pred ---ccCC----------------------CCCCCC------CCcccCCCCC---------------------CCCcc---
Q psy5222 213 ---MGGK----------------------NFYNFP------KKTCRPFDKL---------------------AEGFI--- 237 (415)
Q Consensus 213 ---ls~~----------------------~~~~~~------~~~~~pfd~~---------------------~~G~~--- 237 (415)
++.. .+...| .+.++|||.+ ++|++
T Consensus 160 ~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~ 239 (390)
T 1wdk_C 160 MHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAG 239 (390)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGG
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEech
Confidence 1110 000001 1223789888 79999
Q ss_pred ----ccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCC
Q psy5222 238 ----YGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSP 313 (415)
Q Consensus 238 ----~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~ 313 (415)
++||++++||++++.|+++|.+|+++|+|++.+++.. .+...++..+++++|+++|++++||||||+|++++.
T Consensus 240 ~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p---~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~~ 316 (390)
T 1wdk_C 240 TSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDP---AIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAA 316 (390)
T ss_dssp GBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCG---GGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHH
T ss_pred hcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccCh---hhcchhHHHHHHHHHHHcCCChhhCcEEEeccCCHH
Confidence 9999999999999999999999999999999887532 234567789999999999999999999999988874
Q ss_pred CCCHHHHHHHHHHHhcC---CCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccc
Q psy5222 314 LGDKIEISAIKEVYKNH---FSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSIS 390 (415)
Q Consensus 314 ~~d~~E~~al~~~~~~~---~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~ 390 (415)
|..++.+.|+.. ..++++++.|..+||++||+|+.++++++++|+++ .
T Consensus 317 -----~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~----------~-------------- 367 (390)
T 1wdk_C 317 -----QALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN----------G-------------- 367 (390)
T ss_dssp -----HHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------T--------------
T ss_pred -----HHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc----------C--------------
Confidence 667777777643 33688999999999999999999999999999975 1
Q ss_pred cCCCEEEEeccCcCCceeEEEEee
Q psy5222 391 ININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 391 ~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
.++.++...+.||.+.++||++
T Consensus 368 --~~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 368 --GTFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp --CSEEEEEEEETTTEEEEEEEEC
T ss_pred --CCEEEEEecccchheEEEEEEe
Confidence 3677887777899999999986
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=274.42 Aligned_cols=273 Identities=14% Similarity=0.087 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..+|+++++++||+|+|+++++ ++ +|++|+...... ..+.++.+++..+|
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~~~--id----~v~~g~~~~~~~------------------------~~~~~a~~va~~lG 75 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEE--VE----DVYAGCANQAGE------------------------DNRNVARMALLLAG 75 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSCCSST------------------------TTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecccCCC------------------------CCChHHHHHHHHhC
Confidence 4589999999999999999888 77 788885432110 01367889999999
Q ss_pred C--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCC-HH---------------------------HHH-
Q psy5222 157 I--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLS-PM---------------------------EIQ- 205 (415)
Q Consensus 157 l--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~-~~---------------------------~~~- 205 (415)
+ ++|+++++++|+|++.||..|+++|++|++|+|||+|+|.+.. +. .+.
T Consensus 76 l~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p 155 (401)
T 1ulq_A 76 FPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQ 155 (401)
T ss_dssp CCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHH
T ss_pred CCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccc
Confidence 9 7899999999999999999999999999999999999995433 11 110
Q ss_pred --------HHH----------------------H--------cccccCCCCC-----------CCCCC------------
Q psy5222 206 --------AFH----------------------A--------IGAMGGKNFY-----------NFPKK------------ 224 (415)
Q Consensus 206 --------~~~----------------------~--------~~~ls~~~~~-----------~~~~~------------ 224 (415)
... . .+.+...-.+ .++++
T Consensus 156 ~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~ 235 (401)
T 1ulq_A 156 ALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLA 235 (401)
T ss_dssp HHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHH
T ss_pred cccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHh
Confidence 000 0 0011000000 00111
Q ss_pred cccC-CCCCCCCcc-------ccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcC
Q psy5222 225 TCRP-FDKLAEGFI-------YGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSG 296 (415)
Q Consensus 225 ~~~p-fd~~~~G~~-------~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Ag 296 (415)
.+|| ||. +|++ ++|||+++||+++++|+++|.+|+++|+|++.+++... +...+...+++++|++||
T Consensus 236 ~~rpif~~--~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~---~~~~~~~~a~~~al~~Ag 310 (401)
T 1ulq_A 236 ALRPVFRE--GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPR---IMGIGPVPATRKALERAG 310 (401)
T ss_dssp HSCBSSST--TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGG---GGGGTHHHHHHHHHHHTT
T ss_pred hCCCccCC--CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCcc---ccchhHHHHHHHHHHHcC
Confidence 3466 774 6777 79999999999999999999999999999999887432 224567899999999999
Q ss_pred CCCCcccEEEecCCCCCCCCHHHHHHHHHHHhc--CCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCC
Q psy5222 297 LKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKN--HFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLE 374 (415)
Q Consensus 297 l~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~--~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~ 374 (415)
++++||||||+|++++. .|...++. |+- +..++++.+.+..+||++||+|+.++++++++|+++
T Consensus 311 l~~~dId~ie~heafa~----~~l~~~~~-lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~--------- 376 (401)
T 1ulq_A 311 LSFSDLGLIELNEAFAA----QALAVLRE-WSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR--------- 376 (401)
T ss_dssp CCGGGCSEEEECCSBHH----HHHHHHHH-HTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT---------
T ss_pred CCHHHcCEEEEecchHH----HHHHHHHH-cCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc---------
Confidence 99999999999988873 46666644 443 344788888999999999999999999999999986
Q ss_pred CCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 375 SPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 375 ~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+.++++++++++||.|+++||++.
T Consensus 377 -----------------~~~~gl~~~~~ggG~~~a~v~~~~ 400 (401)
T 1ulq_A 377 -----------------KVQFGLATMCIGVGQGIAVVVEGM 400 (401)
T ss_dssp -----------------TCSEEEEEEEETTTEEEEEEEEEC
T ss_pred -----------------CCCEEEEEeecCCcccEEEEEEeC
Confidence 147899999999999999999874
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=273.33 Aligned_cols=274 Identities=10% Similarity=0.046 Sum_probs=210.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..+|+++++++||+|+|+++++ ++ +|++|+..+... ..+.++.+++..+|
T Consensus 55 ~~~La~~Aa~~AL~dAGl~~~~--Id----~vi~g~~~~~~~------------------------~~~~~a~~va~~lG 104 (442)
T 2wu9_A 55 PDDLLAPVLRALIEKTNLNPSE--VG----DIVVGTVLAPGS------------------------QRASECRMAAFYAG 104 (442)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGG--CC----CEEEECCSSBHH------------------------HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeecCccC------------------------CCChHHHHHHHHcC
Confidence 4689999999999999999988 77 588885432110 01356889999999
Q ss_pred C--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHH--------------HH-------HHH------
Q psy5222 157 I--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPM--------------EI-------QAF------ 207 (415)
Q Consensus 157 l--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~--------------~~-------~~~------ 207 (415)
+ ++|+++|+++|+|++.||..|+++|++|++|+|||+|+|.+.... .+ +..
T Consensus 105 l~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~ 184 (442)
T 2wu9_A 105 FPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVA 184 (442)
T ss_dssp CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHH
T ss_pred CCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHH
Confidence 9 789999999999999999999999999999999999999643310 00 000
Q ss_pred ----------------H--------HcccccCCCC-----------------CCCCCC------------cccC-CCCCC
Q psy5222 208 ----------------H--------AIGAMGGKNF-----------------YNFPKK------------TCRP-FDKLA 233 (415)
Q Consensus 208 ----------------~--------~~~~ls~~~~-----------------~~~~~~------------~~~p-fd~~~ 233 (415)
. ..+.+...-. ..+.++ .++| ||.
T Consensus 185 ~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~-- 262 (442)
T 2wu9_A 185 QRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKK-- 262 (442)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCT--
T ss_pred HHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCC--
Confidence 0 0111111000 000011 3456 764
Q ss_pred CCcc-------ccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEE
Q psy5222 234 EGFI-------YGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLN 306 (415)
Q Consensus 234 ~G~~-------~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~ 306 (415)
+|++ ++|||+++||++++.|+++|.+|+++|+|++.+++.. .+...+...+++++|++||++++||||||
T Consensus 263 ~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p---~~~~~~~~~A~~~Al~~AGl~~~DId~iE 339 (442)
T 2wu9_A 263 DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDP---AIMGIGPAVAIPAAVKAAGLELDDIDLFE 339 (442)
T ss_dssp TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCG---GGGGGHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCc---hhcchHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 6777 7999999999999999999999999999999987632 22345778999999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccC
Q psy5222 307 THGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGK 386 (415)
Q Consensus 307 ~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~ 386 (415)
+|+++|. .|..+++. |+-..+++++.+.+..+||++||+|+.++++++++|+++. |
T Consensus 340 ~h~aft~----~~l~~~~~-lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~-~------------------ 395 (442)
T 2wu9_A 340 INEAFAS----QFVYCRNK-LGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRG-K------------------ 395 (442)
T ss_dssp ECCSBHH----HHHHHHHH-HTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHC-T------------------
T ss_pred EeCCChH----HHHHHHHH-hCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccC-C------------------
Confidence 9999995 57777744 5543346777788888999999999999999999999863 1
Q ss_pred cccccCCCEEEE-eccCcCCceeEEEEeeC
Q psy5222 387 KSISININNVMS-NSFGFSGINSSIILCKK 415 (415)
Q Consensus 387 ~~~~~~~~~~~v-~s~g~gG~~~~~vl~~~ 415 (415)
+.+++++ +++| ||.|+++||+++
T Consensus 396 -----~~~~glas~~~G-GG~~~a~v~~~~ 419 (442)
T 2wu9_A 396 -----DCRFGVVSMCIG-TGMGAAAVFERG 419 (442)
T ss_dssp -----TCCEEEEEEEET-TTEEEEEEEEEC
T ss_pred -----CCCEEEEEeecc-cchheEEEEEec
Confidence 2477884 6788 999999999874
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=272.25 Aligned_cols=271 Identities=12% Similarity=0.086 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..+|+++++++||+|+|+++++ ++ ++++|...+.. ....++.+++..+|
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~--id----~~~~g~~~~~~-------------------------~~~~~a~~ia~~lg 75 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGE--VN----EVILGQVLPAG-------------------------EGQNPARQAAMKAG 75 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSCCTT-------------------------SCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecCCCC-------------------------CCcHHHHHHHHHcC
Confidence 5689999999999999999888 77 56666332110 01256889999999
Q ss_pred CC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHH----H--------HHH--------------
Q psy5222 157 IR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEI----Q--------AFH-------------- 208 (415)
Q Consensus 157 l~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~----~--------~~~-------------- 208 (415)
++ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.+...... . .+.
T Consensus 76 l~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (392)
T 2vu1_A 76 VPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGY 155 (392)
T ss_dssp CCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCC
T ss_pred CCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccc
Confidence 98 8999999999999999999999999999999999999964321100 0 000
Q ss_pred Hcccc----------cC---------------------C-CCCCCC-----CCcccCCCCC-------------------
Q psy5222 209 AIGAM----------GG---------------------K-NFYNFP-----KKTCRPFDKL------------------- 232 (415)
Q Consensus 209 ~~~~l----------s~---------------------~-~~~~~~-----~~~~~pfd~~------------------- 232 (415)
.++.+ +. . .+.-.| .+.|+|||.+
T Consensus 156 ~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v~ 235 (392)
T 2vu1_A 156 HMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAF 235 (392)
T ss_dssp BHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCSS
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCcc
Confidence 01111 00 0 000000 0126788877
Q ss_pred -CCCcc-------ccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccE
Q psy5222 233 -AEGFI-------YGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDY 304 (415)
Q Consensus 233 -~~G~~-------~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~ 304 (415)
++|++ ++|||+++||++++.|+++|.+|+++|+|++.+++. +.+...++..+++++|+++|++++||||
T Consensus 236 ~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~---p~~~~~~~~~a~~~al~~agl~~~dId~ 312 (392)
T 2vu1_A 236 DKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVD---PKVMGTGPIPASRKALERAGWKIGDLDL 312 (392)
T ss_dssp CTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC---GGGGGGTHHHHHHHHHHHHTCCGGGCSE
T ss_pred CCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecC---hhhcchhHHHHHHHHHHHcCCCHHHcCE
Confidence 77999 999999999999999999999999999999988743 2234567789999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHH--HHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC
Q psy5222 305 LNTHGSSSPLGDKIEISA--IKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN 382 (415)
Q Consensus 305 v~~h~~gt~~~d~~E~~a--l~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~ 382 (415)
||+| |..|..+ +.+.|+...+++++++.|..+||++||+|+.++++++++|+++
T Consensus 313 ie~~-------d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~----------------- 368 (392)
T 2vu1_A 313 VEAN-------EAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR----------------- 368 (392)
T ss_dssp EEEC-------CSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH-----------------
T ss_pred EEec-------cccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc-----------------
Confidence 9998 4445555 4566775545789999999999999999999999999999875
Q ss_pred cccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 383 FSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 383 ~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++++++...-||.+.++||++
T Consensus 369 ---------~~~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 369 ---------GARKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp ---------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred ---------CCCEEEEEEecccchheEEEEEe
Confidence 12677776544489999999986
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=264.60 Aligned_cols=273 Identities=15% Similarity=0.128 Sum_probs=213.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..+|+.+++++||+|+|+++++ +| ++++|+..... ....++.+++..+|
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~d--Id----~vi~g~~~~~~-------------------------~~~~~a~~v~~~lG 79 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDM--ID----ESLLGGVLTAG-------------------------LGQNIARQIALGAG 79 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGG--CC----EEEEECSCCTT-------------------------SCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeecCCC-------------------------CCchHHHHHHHHcC
Confidence 5689999999999999999999 87 78888543211 01256789999999
Q ss_pred C--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHH------------------------------
Q psy5222 157 I--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEI------------------------------ 204 (415)
Q Consensus 157 l--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~------------------------------ 204 (415)
+ ++|+++|+.+|+|++.||..|+++|++|++|.|||+|+|.+......
T Consensus 80 l~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (396)
T 4dd5_A 80 IPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNN 159 (396)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTT
T ss_pred CCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhccccccccc
Confidence 9 57999999999999999999999999999999999999965431100
Q ss_pred ---------------------HHH-----------HHcccccCCC-----------CCCCCCCcccC-------------
Q psy5222 205 ---------------------QAF-----------HAIGAMGGKN-----------FYNFPKKTCRP------------- 228 (415)
Q Consensus 205 ---------------------~~~-----------~~~~~ls~~~-----------~~~~~~~~~~p------------- 228 (415)
..+ ...+.+...- ...+++..+|+
T Consensus 160 ~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~v 239 (396)
T 4dd5_A 160 YHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPA 239 (396)
T ss_dssp EEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCBS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCCc
Confidence 000 0000000000 00012223332
Q ss_pred CCC-----CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCccc
Q psy5222 229 FDK-----LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMID 303 (415)
Q Consensus 229 fd~-----~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId 303 (415)
|+. ..++..++||++++||++++.|+++|.+|+++|+|++.+++. +.+...++..+++++|+++|++++|||
T Consensus 240 ~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~---p~~~~~~~~~a~~~al~~Agl~~~dId 316 (396)
T 4dd5_A 240 FKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVD---PKIMGYGPVPATKKALEAANMTIEDID 316 (396)
T ss_dssp SSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC---GGGGGGTHHHHHHHHHHHHTCCGGGCS
T ss_pred cCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCC---CCcccHHHHHHHHHHHHHcCCCHHHcC
Confidence 332 245677899999999999999999999999999999987753 233456789999999999999999999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCc
Q psy5222 304 YLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANF 383 (415)
Q Consensus 304 ~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~ 383 (415)
|||+|++++ .|..++.+.|+....++++++.|.++||++||+|+.++++++++|+++
T Consensus 317 ~ve~~d~f~-----~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~------------------ 373 (396)
T 4dd5_A 317 LVEANEAFA-----AQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR------------------ 373 (396)
T ss_dssp EEEECCSBH-----HHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH------------------
T ss_pred EEEecChHH-----HHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc------------------
Confidence 999997754 578888888886656799999999999999999999999999999974
Q ss_pred ccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 384 SGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 384 v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++++++..+-||+..++|||+
T Consensus 374 --------~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 374 --------DAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp --------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred --------CCCeEEEEEcccCCceeEEEEeC
Confidence 13789999999999999999985
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-32 Score=265.40 Aligned_cols=272 Identities=12% Similarity=0.050 Sum_probs=209.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
...+|+++++++||+|+|+++++ ++ +|++|+...... ....+..++..+
T Consensus 54 ~~~~L~~~Aa~~AL~dAgl~~~~--id----~v~~g~~~~~~~-------------------------~~~~a~~~a~~l 102 (418)
T 2iik_A 54 TPDELLSAVMTAVLKDVNLRPEQ--LG----DICVGNVLQPGA-------------------------GAIMARIAQFLS 102 (418)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGG--CC----CEEEECSSSBGG-------------------------GHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecCCccc-------------------------cccHHHHHHHHc
Confidence 35789999999999999999988 77 688885432110 124566788899
Q ss_pred CC--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHH------------------------HHHHH--
Q psy5222 156 NI--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPM------------------------EIQAF-- 207 (415)
Q Consensus 156 gl--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~------------------------~~~~~-- 207 (415)
|+ ++|+++|+++|+|++.||..|+++|++|++|.|||+|+|.+.... .+...
T Consensus 103 Gl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 182 (418)
T 2iik_A 103 DIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENV 182 (418)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHH
T ss_pred CCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHH
Confidence 99 789999999999999999999999999999999999999654311 00000
Q ss_pred -----------------------H--HcccccCCC-----------C-----CCCCCCcccC-------------CCCCC
Q psy5222 208 -----------------------H--AIGAMGGKN-----------F-----YNFPKKTCRP-------------FDKLA 233 (415)
Q Consensus 208 -----------------------~--~~~~ls~~~-----------~-----~~~~~~~~~p-------------fd~~~ 233 (415)
. ..+.+...- . ..++++.||| ||.++
T Consensus 183 a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~ 262 (418)
T 2iik_A 183 AERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDG 262 (418)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCC
Confidence 0 011111000 0 0113567888 99875
Q ss_pred -----CCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEec
Q psy5222 234 -----EGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTH 308 (415)
Q Consensus 234 -----~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h 308 (415)
+|+.++|||+++||++++.|+++|.+|+++|.|++.+... +.+...+...+++++|++||++++||||||+|
T Consensus 263 ~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~---p~~~~~~~~~a~~~al~~Agl~~~dId~vE~h 339 (418)
T 2iik_A 263 STTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVP---PDIMGIGPAYAIPVALQKAGLTVSDVDIFEIN 339 (418)
T ss_dssp CCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECC---GGGGGGHHHHHHHHHHHHHTCCGGGEEEEEEC
T ss_pred ceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCC---chhcchhHHHHHHHHHHHcCCCHHHCCeeeee
Confidence 9999999999999999999999999999999999887532 12234577889999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHhcCCCceeeeecc--cccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccC
Q psy5222 309 GSSSPLGDKIEISAIKEVYKNHFSKLLLNSTK--SLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGK 386 (415)
Q Consensus 309 ~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k--~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~ 386 (415)
++++ ..|..|.++|. -. +.+++..+ ..+||++||+|+.++++++++|+++ .
T Consensus 340 ~af~-~~~~~~~~~lg----~~--~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~----------~---------- 392 (418)
T 2iik_A 340 EAFA-SQAAYCVEKLR----LP--PEKVNPLGGAVALGHPLGCTGARQVITLLNELKRR----------G---------- 392 (418)
T ss_dssp CSBH-HHHHHHHHHHT----CC--GGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH----------T----------
T ss_pred ccch-HHHHHHHHHcC----CC--ccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhc----------C----------
Confidence 8766 56777777764 22 23455445 5789999999999999999999872 1
Q ss_pred cccccCCC-EEEEeccCcCCceeEEEEee
Q psy5222 387 KSISININ-NVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 387 ~~~~~~~~-~~~v~s~g~gG~~~~~vl~~ 414 (415)
.+ +.+++..+-||...++||++
T Consensus 393 ------~~~~gl~~~c~ggG~g~a~~~e~ 415 (418)
T 2iik_A 393 ------KRAYGVVSMCIGTGMGAAAVFEY 415 (418)
T ss_dssp ------SCEEEEEEEEETTTEEEEEEEEE
T ss_pred ------CCeeeEEEEeeccchhheEEEec
Confidence 13 67888888899999999986
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=266.20 Aligned_cols=247 Identities=15% Similarity=0.093 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..+|+++++++||+|+|+++++ ++ ++++|...+.. ....++.+++..+|
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~~~--id----~~~~g~~~~~~-------------------------~~~~~a~~va~~lg 80 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPKEE--VK----EAYMGNVLQGG-------------------------EGQAPTRQAVLGAG 80 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSCCTT-------------------------SCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeccCCC-------------------------CCchHHHHHHHHcC
Confidence 4689999999999999999888 77 56776432110 01246789999999
Q ss_pred C--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH-------------------HHH---------
Q psy5222 157 I--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME-------------------IQA--------- 206 (415)
Q Consensus 157 l--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~-------------------~~~--------- 206 (415)
+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|....... +..
T Consensus 81 l~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (395)
T 2ib8_A 81 LPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIH 160 (395)
T ss_dssp CCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEE
T ss_pred CCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccch
Confidence 9 8999999999999999999999999999999999999995332100 100
Q ss_pred --------HHHcc------------------------cccCC---------CC---CCCCCCcccC--CCC---------
Q psy5222 207 --------FHAIG------------------------AMGGK---------NF---YNFPKKTCRP--FDK--------- 231 (415)
Q Consensus 207 --------~~~~~------------------------~ls~~---------~~---~~~~~~~~~p--fd~--------- 231 (415)
....+ .+... .. ..+.++.+++ ||.
T Consensus 161 m~~~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~f~ 240 (395)
T 2ib8_A 161 MGSCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTVFQ 240 (395)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCTTC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCcccc
Confidence 01111 00000 00 0001122332 554
Q ss_pred CCCCcc-------ccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccE
Q psy5222 232 LAEGFI-------YGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDY 304 (415)
Q Consensus 232 ~~~G~~-------~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~ 304 (415)
+++|++ ++||++++||++++.|+++|.+|+++|+|++.++.. +.+...++..+++++|++||++++||||
T Consensus 241 ~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~---p~~~~~~~~~a~~~al~~Agl~~~dId~ 317 (395)
T 2ib8_A 241 KENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVE---PIDFPIAPVYAASMVLKDVGLKKEDIAM 317 (395)
T ss_dssp SSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECC---GGGGGGHHHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccC---hhhccccHHHHHHHHHHHcCCCHHHcCE
Confidence 568999 999999999999999999999999999999976521 1223467889999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHH--HhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhc
Q psy5222 305 LNTHGSSSPLGDKIEISAIKEV--YKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRK 364 (415)
Q Consensus 305 v~~h~~gt~~~d~~E~~al~~~--~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~ 364 (415)
||+| |..|..++..+ |+...+++++++.|..+||++||+|+.++++++++|++
T Consensus 318 ie~~-------D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~ 372 (395)
T 2ib8_A 318 WEVN-------EAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ 372 (395)
T ss_dssp EEEC-------CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT
T ss_pred EEEc-------cccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh
Confidence 9977 55677777766 76554578999999999999999999999999999985
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-32 Score=261.76 Aligned_cols=271 Identities=13% Similarity=0.053 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHHHHhCC----CCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHH
Q psy5222 77 FIQTSIIAALQAWYNSK----LHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMS 152 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag----~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 152 (415)
..+|+++++++||+|+| +++++ ++ +|++|+..+.. ..+.++.+++
T Consensus 35 ~~~La~~Aa~~Al~~Ag~~~~l~~~~--id----~v~~g~~~~~~-------------------------~~~~~a~~va 83 (393)
T 1afw_A 35 TDYLLYNFLNEFIGRFPEPLRADLNL--IE----EVACGNVLNVG-------------------------AGATEHRAAC 83 (393)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGG--CC----CEEEECSSSBG-------------------------GGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCHHH--CC----EEEEEecCCCC-------------------------CCChHHHHHH
Confidence 45899999999999999 99888 77 58888543211 1246788999
Q ss_pred HHhCC--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH------------HH--HH-----HHcc
Q psy5222 153 EIFNI--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME------------IQ--AF-----HAIG 211 (415)
Q Consensus 153 ~~lgl--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~------------~~--~~-----~~~~ 211 (415)
..+|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+..... +. .+ ..++
T Consensus 84 ~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 163 (393)
T 1afw_A 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMG 163 (393)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHH
T ss_pred HHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHH
Confidence 99999 7899999999999999999999999999999999999995322110 00 00 0011
Q ss_pred cccC--------------------------C---CC--------------CCCCCC------------cccC-CCCCCCC
Q psy5222 212 AMGG--------------------------K---NF--------------YNFPKK------------TCRP-FDKLAEG 235 (415)
Q Consensus 212 ~ls~--------------------------~---~~--------------~~~~~~------------~~~p-fd~~~~G 235 (415)
.++. + .. ..++++ .+|| ||.++ |
T Consensus 164 ~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~-G 242 (393)
T 1afw_A 164 ITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDR-G 242 (393)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC----C
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCC-C
Confidence 0000 0 00 001122 3456 87554 7
Q ss_pred cc-------ccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEec
Q psy5222 236 FI-------YGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTH 308 (415)
Q Consensus 236 ~~-------~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h 308 (415)
++ ++||++++||++++.|+++|.+|+++|+|++.+++... +...+...+++++|++||++++||||||+|
T Consensus 243 ~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~---~~~~~~~~a~~~al~~Agl~~~dId~ve~h 319 (393)
T 1afw_A 243 TTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPE---IMGVGPAYAIPKVLEATGLQVQDIDIFEIN 319 (393)
T ss_dssp CCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGG---GGGGHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred CeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChh---hcchhHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 66 89999999999999999999999999999999887422 234577899999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcc
Q psy5222 309 GSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKS 388 (415)
Q Consensus 309 ~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~ 388 (415)
++++. .|...++. |+....++++.+.+..+||++||+|+.++++++++|+++ .
T Consensus 320 ~~ft~----~~l~~~~~-lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~----------~------------ 372 (393)
T 1afw_A 320 EAFAA----QALYCIHK-LGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKD----------Q------------ 372 (393)
T ss_dssp CSBHH----HHHHHHHH-HTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTT----------C------------
T ss_pred ccCHH----HHHHHHHH-hCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhc----------C------------
Confidence 99985 46666544 554434678888888899999999999999999999874 1
Q ss_pred cccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 389 ISININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 389 ~~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
. .++...+=||...++||+++
T Consensus 373 -----~-gl~~~c~ggg~g~a~~~~~~ 393 (393)
T 1afw_A 373 -----I-GVVSMCIGTGMGAAAIFIKE 393 (393)
T ss_dssp -----E-EEEEEEETTTEEEEEEEEEC
T ss_pred -----C-cEEEEeecccceEEEEEEeC
Confidence 0 33333334778889998874
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-32 Score=264.79 Aligned_cols=273 Identities=13% Similarity=0.095 Sum_probs=213.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..+|+.+++++||+|+|+++++ +| ++++|+..... ....++.+++..+|
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~--Id----~v~~g~~~~~~-------------------------~~~~~a~~i~~~lG 77 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHE--VD----EVILGHCIQRT-------------------------DEANTARTAALAAG 77 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGG--CC----EEEEECSSCCG-------------------------GGCSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHhH--CC----EEEEEEccCCC-------------------------ccchHHHHHHHHcC
Confidence 5689999999999999999999 88 68888443211 01246778999999
Q ss_pred C--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHH------------------------------
Q psy5222 157 I--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEI------------------------------ 204 (415)
Q Consensus 157 l--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~------------------------------ 204 (415)
+ ++|+++|+.+|+|++.||..|+++|++|++|.+||+|+|.+......
T Consensus 78 l~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (394)
T 3ss6_A 78 FPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHI 157 (394)
T ss_dssp CCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCC
T ss_pred CCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccc
Confidence 9 57999999999999999999999999999999999999864431100
Q ss_pred -----------------------HHHHH--------cccccCC---------CC--CCCCCCcccC-------------C
Q psy5222 205 -----------------------QAFHA--------IGAMGGK---------NF--YNFPKKTCRP-------------F 229 (415)
Q Consensus 205 -----------------------~~~~~--------~~~ls~~---------~~--~~~~~~~~~p-------------f 229 (415)
....+ .|.+... .. ..++++.+|+ |
T Consensus 158 ~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pvf 237 (394)
T 3ss6_A 158 MMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAF 237 (394)
T ss_dssp BHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBSS
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCcc
Confidence 00000 0000000 00 0123444443 5
Q ss_pred CC-----CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccE
Q psy5222 230 DK-----LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDY 304 (415)
Q Consensus 230 d~-----~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~ 304 (415)
+. ..++..++||++++||++++.|+++|.+++++|.|++.++.. +.+...++..+++++|+++|++++||||
T Consensus 238 ~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~---p~~~~~~~~~a~~~al~~agl~~~dId~ 314 (394)
T 3ss6_A 238 RKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVD---PKIMGIGPAPAIRKGLEKVDWSLEDADL 314 (394)
T ss_dssp STTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC---GGGGGGTHHHHHHHHHHHHTCCGGGCSE
T ss_pred CCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCC---CccchHHHHHHHHHHHHHcCCCHHHcCE
Confidence 53 256777899999999999999999999999999999987632 2233456789999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcc
Q psy5222 305 LNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFS 384 (415)
Q Consensus 305 v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v 384 (415)
||+|++++ .|..++.+.|+....++++++.|..+||+.||||+.++++++++|+++
T Consensus 315 ve~~d~fa-----~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~------------------- 370 (394)
T 3ss6_A 315 LEINEAFA-----AQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR------------------- 370 (394)
T ss_dssp EEECCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH-------------------
T ss_pred EEeCCchH-----HHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc-------------------
Confidence 99996654 688888888886656789999999999999999999999999999874
Q ss_pred cCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 385 GKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 385 ~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+.++.+++..+-||...++|||+
T Consensus 371 -------~~~~gl~~~c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 371 -------GLEKGIASLCVGGGIGVALFIEA 393 (394)
T ss_dssp -------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred -------CCCEEEEEEccCcCceeEEEEEc
Confidence 13678888888899999999986
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-31 Score=260.20 Aligned_cols=273 Identities=17% Similarity=0.128 Sum_probs=212.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
..+|+.+|+++||+|+|+++++ +| ++++|+..... ....++.+++..+|
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~--Id----~v~~g~~~~~~-------------------------~~~~~a~~~~~~lG 77 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSE--ID----EVIIGNVLQTG-------------------------LGQNVARQIAINAG 77 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGG--CC----EEEEECCCCSS-------------------------TTCCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeccCCC-------------------------CcchHHHHHHHHcC
Confidence 4689999999999999999999 88 78888433110 01246789999999
Q ss_pred C--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHH---H------------------------
Q psy5222 157 I--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQA---F------------------------ 207 (415)
Q Consensus 157 l--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~---~------------------------ 207 (415)
+ ++|+++|+.+|+|++.||..|+++|++|.+|.+||+|+|.+........ +
T Consensus 78 l~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (395)
T 4e1l_A 78 IPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQ 157 (395)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTH
T ss_pred CCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhccccccccccc
Confidence 9 6799999999999999999999999999999999999997665332110 0
Q ss_pred -----------H------------------------HcccccCC----------CC--CCCCCCcccC------------
Q psy5222 208 -----------H------------------------AIGAMGGK----------NF--YNFPKKTCRP------------ 228 (415)
Q Consensus 208 -----------~------------------------~~~~ls~~----------~~--~~~~~~~~~p------------ 228 (415)
. ..+.+... .. ..++++.+|+
T Consensus 158 ~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~~ 237 (395)
T 4e1l_A 158 YHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKP 237 (395)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCCB
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCCC
Confidence 0 00000000 00 0012333332
Q ss_pred -CCC-----CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcc
Q psy5222 229 -FDK-----LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMI 302 (415)
Q Consensus 229 -fd~-----~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dI 302 (415)
|+. ..++..++||++++||++++.|+++|.+++++|.|++.+++.. .+...++..+++++|+++|++++||
T Consensus 238 v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p---~~~~~~~~~ai~~al~~agl~~~dI 314 (395)
T 4e1l_A 238 AFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEP---EVMGTGPIPATRKALKKAGLSINDI 314 (395)
T ss_dssp SSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCG---GGTTCTHHHHHHHHHHHTTCCGGGC
T ss_pred ccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCC---CcchHHHHHHHHHHHHHcCCCHHHc
Confidence 432 2466778999999999999999999999999999999887532 2234457899999999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC
Q psy5222 303 DYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN 382 (415)
Q Consensus 303 d~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~ 382 (415)
||||+|+..+ .|..++.+.|+....++++++.|..+||+.||||+.++++++++|+++
T Consensus 315 d~ve~~d~fa-----~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~----------------- 372 (395)
T 4e1l_A 315 DLIEANEAFA-----AQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKR----------------- 372 (395)
T ss_dssp SEEEECCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH-----------------
T ss_pred CEEEecChhH-----HHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc-----------------
Confidence 9999996544 688888888886656789999999999999999999999999999974
Q ss_pred cccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 383 FSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 383 ~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++.+++..+-||...++|||+
T Consensus 373 ---------~~~~gl~~~c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 373 ---------KVETGLATLCIGGGQGISMVVSR 395 (395)
T ss_dssp ---------TCSEEEEEEESSTTEEEEEEEEC
T ss_pred ---------CCCEEEEEEccCCCceEEEEEeC
Confidence 13788888889999999999985
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-31 Score=254.14 Aligned_cols=276 Identities=15% Similarity=0.056 Sum_probs=206.6
Q ss_pred CHHHHHHHHHHHHHHHhC-CCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHH
Q psy5222 75 PLFIQTSIIAALQAWYNS-KLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSE 153 (415)
Q Consensus 75 ~~~~~l~~~a~~~Al~da-g~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 153 (415)
.+..+|+.+++++||+|+ |+++++ +| ++++|+...... ....++.+++.
T Consensus 25 ~~~~~L~~~a~~~Al~~a~gi~~~~--Id----~v~~g~~~~~~~------------------------~~~~~a~~~~~ 74 (387)
T 3goa_A 25 VRAEDLSAHLMRSLLARNPSLTAAT--LD----DIYWGCVQQTLE------------------------QGFNIARNAAL 74 (387)
T ss_dssp SCHHHHHHHHHHHHHHHCTTSCGGG--CC----EEEEECSCCSBT------------------------TTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhccCCCHHH--cC----EEEEEcccCCcc------------------------cccHHHHHHHH
Confidence 346789999999999999 999999 88 688885432110 01246778999
Q ss_pred HhCC--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHH----------------------------
Q psy5222 154 IFNI--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPME---------------------------- 203 (415)
Q Consensus 154 ~lgl--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~---------------------------- 203 (415)
.+|+ +.|+++|+++|+|++.||..|+++|++|++|.+||+|+|.+.....
T Consensus 75 ~~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 154 (387)
T 3goa_A 75 LAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEML 154 (387)
T ss_dssp HTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHH
T ss_pred HcCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHH
Confidence 9999 5799999999999999999999999999999999999996543211
Q ss_pred ----------HHHHH-----------HcccccCCC------------CCCCCCCcccC-------------CCC------
Q psy5222 204 ----------IQAFH-----------AIGAMGGKN------------FYNFPKKTCRP-------------FDK------ 231 (415)
Q Consensus 204 ----------~~~~~-----------~~~~ls~~~------------~~~~~~~~~~p-------------fd~------ 231 (415)
+..+. ..+.+...- ...++++.+|| |+.
T Consensus 155 ~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t 234 (387)
T 3goa_A 155 SRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVT 234 (387)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCcee
Confidence 00000 000111000 00012333333 553
Q ss_pred CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCC
Q psy5222 232 LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSS 311 (415)
Q Consensus 232 ~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~g 311 (415)
..++..++||++++||++++.|+++|.+|+++|+|++.+++.... ...+...+++++|+++|++++||||||+|+++
T Consensus 235 ~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~---~~~~~~~a~~~al~~agl~~~did~ve~h~~f 311 (387)
T 3goa_A 235 AGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSI---MGYGPVPASKLALKKAGLSASDIDVFEMNEAF 311 (387)
T ss_dssp GGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTS---TTCTHHHHHHHHHHHHTCCGGGCSEEEECCSB
T ss_pred cccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCc---chHHHHHHHHHHHHHcCCCHHHcCEEEEeCcc
Confidence 246677899999999999999999999999999999998875442 33456899999999999999999999999988
Q ss_pred CCCCCHHHHHHHHHHHhc---CCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcc
Q psy5222 312 SPLGDKIEISAIKEVYKN---HFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKS 388 (415)
Q Consensus 312 t~~~d~~E~~al~~~~~~---~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~ 388 (415)
+. .+...+ +.++- ...++++++.|..+||++||+|+.++++++++|+++
T Consensus 312 ~~----~~~~~~-~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~----------------------- 363 (387)
T 3goa_A 312 AA----QILPCI-KDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK----------------------- 363 (387)
T ss_dssp HH----HHHHHH-HHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT-----------------------
T ss_pred hH----HHHHHH-HHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhc-----------------------
Confidence 74 233333 33332 223678888899999999999999999999999972
Q ss_pred cccCCCEEEEeccCcCCceeEEEEee
Q psy5222 389 ISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 389 ~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++.++....-||...++|||+
T Consensus 364 ---~~~~gl~~~c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 364 ---DAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_dssp ---TCSEEEEEEEETTTEEEEEEEEC
T ss_pred ---CCCEEEEEeccCcCceEEEEEEe
Confidence 13677777767788999999986
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=250.57 Aligned_cols=274 Identities=15% Similarity=0.082 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 77 FIQTSIIAALQAWYN-SKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 77 ~~~l~~~a~~~Al~d-ag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
..+|+.+++++||+| +|+++++ +| ++++|+...... ....++.+++..+
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~~d--Id----~vi~g~~~~~~~------------------------~~~~~a~~va~~l 81 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDETL--IS----DMILGVVSPVGD------------------------QGGDIARTAVLAA 81 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCGGG--EE----EEEEECC--------------------------------CHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhcCcCHHH--CC----EEEEEecCcccc------------------------ccCcHHHHHHHHc
Confidence 568999999999999 9999998 87 688884321110 0124678999999
Q ss_pred CC--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHH--------------------HHH------
Q psy5222 156 NI--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEI--------------------QAF------ 207 (415)
Q Consensus 156 gl--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~--------------------~~~------ 207 (415)
|+ ++|+++|+.+|+|++.||..|+++|++|++|+|||+|+|.+...... ..+
T Consensus 82 Glp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~a 161 (407)
T 3svk_A 82 GLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLIA 161 (407)
T ss_dssp TCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHHH
T ss_pred CCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHHH
Confidence 99 67999999999999999999999999999999999999965542110 000
Q ss_pred ----------H--------------HcccccCC-------CC--CCCCCCcccC-------------CCC----------
Q psy5222 208 ----------H--------------AIGAMGGK-------NF--YNFPKKTCRP-------------FDK---------- 231 (415)
Q Consensus 208 ----------~--------------~~~~ls~~-------~~--~~~~~~~~~p-------------fd~---------- 231 (415)
+ +.+.+... .. ..+|+..+|+ |+.
T Consensus 162 ~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~ 241 (407)
T 3svk_A 162 TLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDV 241 (407)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC-----------
T ss_pred HHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCcccccccc
Confidence 0 00000000 00 0113334442 432
Q ss_pred ----------------CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHc
Q psy5222 232 ----------------LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQS 295 (415)
Q Consensus 232 ----------------~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~A 295 (415)
..+...++||++++||++++.|+++|.+++++|.|++.+.+.... ...+...+++++|+++
T Consensus 242 ~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~---~~~~~~~a~~~al~~A 318 (407)
T 3svk_A 242 ALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVI---MLTGPTPATRKVLDRA 318 (407)
T ss_dssp --CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC---------CCCTHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCcc---ccHHHHHHHHHHHHHc
Confidence 135566999999999999999999999999999999997764332 2334578999999999
Q ss_pred CCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCC
Q psy5222 296 GLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLES 375 (415)
Q Consensus 296 gl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~ 375 (415)
|++++||||+|+|++++. .|... .+.++-...++++++.+..+||++||+|+.++++++++|+++
T Consensus 319 gl~~~dId~~e~hdaf~~----~~l~~-~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~---------- 383 (407)
T 3svk_A 319 GLTIDDIDLFELNEAFAS----VVLKF-QKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERR---------- 383 (407)
T ss_dssp TCCGGGCSEEEECCSBHH----HHHHH-HHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH----------
T ss_pred CCCHHHCCEEEEeChhHH----HHHHH-HHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc----------
Confidence 999999999999988874 34333 344555444788899999999999999999999999999863
Q ss_pred CCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 376 PIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 376 ~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..++.+++..+-||...++|||+
T Consensus 384 ----------------~~~~gl~~~c~ggG~g~a~~~e~ 406 (407)
T 3svk_A 384 ----------------NARRALITLCIGGGMGVATIIER 406 (407)
T ss_dssp ----------------TCCEEEEEEECSSSCEEEEEEEE
T ss_pred ----------------CCCEEEEEeeccCcceEEEEEEc
Confidence 13788898999999999999986
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=245.42 Aligned_cols=247 Identities=12% Similarity=0.104 Sum_probs=187.1
Q ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHH
Q psy5222 75 PLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEI 154 (415)
Q Consensus 75 ~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 154 (415)
++..+|++.|+++||+++|+++++ ++ ++++|+.... ......+.+++..
T Consensus 48 ~~~~~la~~a~~~al~~ag~~~~~--id----~vi~~~~~~~-------------------------~~~~~~a~~v~~~ 96 (322)
T 1ub7_A 48 EYTSDLAFKAVEDLLRRHPGALEG--VD----AVIVATNTPD-------------------------ALFPDTAALVQAR 96 (322)
T ss_dssp CCHHHHHHHHHHHHHHHSTTTTTT--EE----EEEEECSSCS-------------------------EEESCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEcCCCC-------------------------CCCCcHHHHHHHH
Confidence 457899999999999999998877 65 6787754310 0011367899999
Q ss_pred hCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCC
Q psy5222 155 FNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAE 234 (415)
Q Consensus 155 lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~ 234 (415)
+|+++|+++++++|+|++.||..|+++|++|++|.|||+|+|. +++ ...|+| +++
T Consensus 97 lgl~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~-~s~-----------------------~~~~~d-~~~ 151 (322)
T 1ub7_A 97 FGLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEA-LSK-----------------------IIDWND-RAT 151 (322)
T ss_dssp TTCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEEC-GGG-----------------------TSCTTC-HHH
T ss_pred hCCCCEEEeeCccchHHHHHHHHHHHHHHcCCCCEEEEEEech-hcc-----------------------ccChhh-ccc
Confidence 9999999999999999999999999999999999999999994 221 112444 467
Q ss_pred CccccceEEEEEeCChhhHHhcCCeeEEEE-EeEEeccCCCCCCC-----C-----------CH--------HHHHHHHH
Q psy5222 235 GFIYGQASAALLIEGNKNIKILNKSYLARL-LGGVINLHATASPE-----P-----------NL--------NNEISVMN 289 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~A~~~g~~i~a~i-~g~~~~~~~~~~~~-----~-----------~~--------~~~~~~~~ 289 (415)
|+++||||+++||++.+. +..+++.+ .+.+...+..+.+. | ++ ..+.++++
T Consensus 152 ~~~~GdGA~A~vL~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~ 227 (322)
T 1ub7_A 152 AVLFGDGGGAAVVGKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATL 227 (322)
T ss_dssp HTTBCCEEEEEEEECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHH
T ss_pred ceeeccccEEEEEEecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHH
Confidence 999999999999998754 34566544 22222222211100 2 22 57889999
Q ss_pred HHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCC
Q psy5222 290 SVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHP 369 (415)
Q Consensus 290 ~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~ 369 (415)
++|+++|++++|||||++|+++++..| ++.+.|+...+++ .+.|..+||+.+|++.+.+..+ ++++.+.
T Consensus 228 ~al~~agl~~~did~~~~H~~~~~~~d-----~~~~~lg~~~~~~--~~~~~~~Gh~~~As~~~~l~~~---l~~g~~~- 296 (322)
T 1ub7_A 228 EAIEKAGLTPEDIRLFVPHQANLRIID-----AARERLGLPWERV--AVNVDRYGNTSTASIPLALKEA---VDAGRIR- 296 (322)
T ss_dssp HHHHHHTCCGGGCSEEEECCSCHHHHH-----HHHHTTTCCGGGB--CCCHHHHCBCGGGHHHHHHHHH---HHHTSSC-
T ss_pred HHHHHcCCCHHHCCEEEEcCCCHHHHH-----HHHHHcCCCHHHH--HHHHHhhCcHHHHHHHHHHHHH---HHhCCCC-
Confidence 999999999999999999999997655 4556666543333 3678999999999999977654 4555441
Q ss_pred CCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 370 NLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 370 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+.+++++++||+|++++++||+.
T Consensus 297 ----------------------~g~~~l~~~~G~G~~~~~~vl~~ 319 (322)
T 1ub7_A 297 ----------------------EGDHVLLVSFGAGLTWAAAVLTW 319 (322)
T ss_dssp ----------------------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred ----------------------CCCEEEEEEEChhheeEEEEEEe
Confidence 24789999999999999999973
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=223.59 Aligned_cols=242 Identities=14% Similarity=0.143 Sum_probs=185.1
Q ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHH
Q psy5222 75 PLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEI 154 (415)
Q Consensus 75 ~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 154 (415)
++..+|+++|+++||+++|+++++ ++ ++++++..+.. .. ..++.+++..
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~--id----~v~~~~~~~~~------------------------~~-~~~a~~v~~~ 96 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEE--LD----LIILATLTPQK------------------------RF-PSTACLVQAQ 96 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGG--CS----EEEEECSSCSS------------------------SS-SCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEcCCCCC------------------------CC-CcHHHHHHHH
Confidence 567899999999999999999888 77 78888543210 01 1368899999
Q ss_pred hCCCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 155 FNIRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 155 lgl~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
+|+++ |+++++++|+|++.||..|+++|++|++|.|||+|+|.+ ++ . .. |+.+.
T Consensus 97 lgl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~-s~----------~-------------~~-~~~~~ 151 (309)
T 2ebd_A 97 LKAKGVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKL-SE----------A-------------VD-WEDRS 151 (309)
T ss_dssp HTCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG-GG----------T-------------CC-TTCTT
T ss_pred hCCCCceEEecCccchHHHHHHHHHHHHHHCCCCCEEEEEEeccc-cc----------c-------------cC-ccchh
Confidence 99998 999999999999999999999999999999999999952 11 0 11 23356
Q ss_pred CCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCC---CCC-------CCCHH--------HHHHHHHHHHHHc
Q psy5222 234 EGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHAT---ASP-------EPNLN--------NEISVMNSVLKQS 295 (415)
Q Consensus 234 ~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~---~~~-------~~~~~--------~~~~~~~~aL~~A 295 (415)
+|+++||||+++||++.+.+ ..+++.+.+ +++. +.. .+++. .+.++++++|+++
T Consensus 152 ~~~~~gdGaaA~vL~~~~~~----~~i~~~~~~----~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~a 223 (309)
T 2ebd_A 152 TCVLFGDGAGAVVVTRSEDK----SDILATRMY----AEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKA 223 (309)
T ss_dssp TTTTBCEEEEEEEEEECSSS----CEEEEEEEE----ECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccccccEEEEEEecCCC----CceeEEEEE----ecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHc
Confidence 79999999999999987653 234444332 3332 111 22333 6789999999999
Q ss_pred CCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCC
Q psy5222 296 GLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLES 375 (415)
Q Consensus 296 gl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~ 375 (415)
|++++|||+|++|+++++..| ++.+.++...++++ +.|..+||+.+|++.+++..++. ++.+
T Consensus 224 gl~~~did~~~~H~~~~~~~~-----~~~~~lg~~~~~~~--~~~~~~Gh~~~As~~~~L~~~~~---~g~~-------- 285 (309)
T 2ebd_A 224 GVKPEEVSLVIPHQANVRIIN-----ALAEKLNIPKEKVF--VNIQKYGNTSAASIPIALHEAIK---EGKV-------- 285 (309)
T ss_dssp TCCGGGCSEEEECCSCHHHHH-----HHHHHTTCCGGGBC--CCHHHHCBCGGGHHHHHHHHHHH---TTCC--------
T ss_pred CCCHHHCCEEEEcCCCHHHHH-----HHHHHhCCCHHHhh--hhHhhhcchHHHHHHHHHHHHHH---cCCC--------
Confidence 999999999999999997543 45667765433343 56889999999999999887643 3322
Q ss_pred CCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 376 PIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 376 ~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+.++++..+||.|.+.+++|++
T Consensus 286 ---------------~~G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 286 ---------------KRGDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp ---------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ---------------CCCCEEEEEEEchhhhhEEEEEE
Confidence 12478899999999999999986
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-28 Score=228.93 Aligned_cols=246 Identities=15% Similarity=0.132 Sum_probs=185.8
Q ss_pred CCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHH
Q psy5222 74 SPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSE 153 (415)
Q Consensus 74 ~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 153 (415)
.++..+|+++|+++||+++|+++++ ++ ++++|+.... .....++.+++.
T Consensus 48 ~~~~~~l~~~a~~~al~~ag~~~~~--id----~vi~g~~~~~-------------------------~~~~~~a~~v~~ 96 (317)
T 1hnj_A 48 NETVSTMGFEAATRAIEMAGIEKDQ--IG----LIVVATTSAT-------------------------HAFPSAACQIQS 96 (317)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSCCS-------------------------CSSSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEcCCCC-------------------------CCCCcHHHHHHH
Confidence 3567899999999999999999888 76 7888854310 001257889999
Q ss_pred HhCCC-CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCC
Q psy5222 154 IFNIR-GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKL 232 (415)
Q Consensus 154 ~lgl~-Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~ 232 (415)
.||++ +|+++++++|+|++.||..|+++|++|++|.|||+|+|. +++. + . |+.+
T Consensus 97 ~lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~-~s~~----------~-------------~-~~d~ 151 (317)
T 1hnj_A 97 MLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDV-LART----------C-------------D-PTDR 151 (317)
T ss_dssp HHTCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-HHHH----------S-------------C-TTCH
T ss_pred HhCCCCCeEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEech-hccc----------C-------------C-chhc
Confidence 99998 899999999999999999999999999999999999994 2211 0 1 1223
Q ss_pred CCCccccceEEEEEeCChhhHHhcCCeeEEEEEeE-EeccCCCCCC-------------CCCHH--------HHHHHHHH
Q psy5222 233 AEGFIYGQASAALLIEGNKNIKILNKSYLARLLGG-VINLHATASP-------------EPNLN--------NEISVMNS 290 (415)
Q Consensus 233 ~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~-~~~~~~~~~~-------------~~~~~--------~~~~~~~~ 290 (415)
.+|+++||||+++||++.+. ..+++.+.+. +...+..+.+ .+++. .+.+++++
T Consensus 152 ~~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 226 (317)
T 1hnj_A 152 GTIIIFGDGAGAAVLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDE 226 (317)
T ss_dssp HHHTTBCCEEEEEEEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHH
T ss_pred ccceeeccccEEEEEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHH
Confidence 35899999999999998753 2467766542 2212221111 12344 67899999
Q ss_pred HHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCC
Q psy5222 291 VLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPN 370 (415)
Q Consensus 291 aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~ 370 (415)
+|+++|++++|||||++|+++++..| ++.+.|+...++ +.+.|..+||+.+|+..+.|..++ +++.+.
T Consensus 227 aL~~agl~~~did~v~~H~~~~~~~d-----~i~~~lg~~~~~--~~~~~~~~Gn~~~As~~~~L~~~~---~~~~~~-- 294 (317)
T 1hnj_A 227 TLAANNLDRSQLDWLVPHQANLRIIS-----ATAKKLGMSMDN--VVVTLDRHGNTSAASVPCALDEAV---RDGRIK-- 294 (317)
T ss_dssp HHHHTTCCGGGCCEEEECCSCHHHHH-----HHHHHTTCCGGG--BCCCHHHHCBCGGGHHHHHHHHHH---HTTCSC--
T ss_pred HHHHcCCCHHHCCEEEEcCCCHHHHH-----HHHHHcCCCHHH--hHhhHhhhCcHHHHHHHHHHHHHH---HhCCCC--
Confidence 99999999999999999999998654 466677654323 347899999999999998876553 433321
Q ss_pred CCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 371 LNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 371 ~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+.++++..+||.|.+.++++|+
T Consensus 295 ---------------------~G~~vll~~~G~G~t~~~~~l~ 316 (317)
T 1hnj_A 295 ---------------------PGQLVLLEAFGGGFTWGSALVR 316 (317)
T ss_dssp ---------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ---------------------CCCEEEEEEEchhheeEEEEEE
Confidence 2468899999999999999986
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-27 Score=224.14 Aligned_cols=246 Identities=12% Similarity=0.073 Sum_probs=183.9
Q ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHH
Q psy5222 75 PLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEI 154 (415)
Q Consensus 75 ~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 154 (415)
.+..+|+++|+++||+++|+++++ ++ ++++++..+.. . . ...+.+++..
T Consensus 49 ~~~~~l~~~a~~~al~~ag~~~~~--id----~vi~~~~~~~~--------------------~----~-~~~a~~v~~~ 97 (313)
T 1zow_A 49 QDTSDLAYEASVKAIADAGIQPED--ID----MIIVATATGDM--------------------P----F-PTVANMLQER 97 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSSCSC--------------------S----S-SCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEcCCCCC--------------------C----C-CcHHHHHHHH
Confidence 357799999999999999999888 76 78888543210 0 0 1357899999
Q ss_pred hCCC-CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 155 FNIR-GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 155 lgl~-Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
+|++ +|+++++.+|+|++.||..|+++|++|++|.|||+|+|.+ +. ..+|+|. .
T Consensus 98 lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~-s~-----------------------~~~~~d~-~ 152 (313)
T 1zow_A 98 LGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKL-SK-----------------------ITDLTDR-S 152 (313)
T ss_dssp HTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEG-GG-----------------------TCCTTCH-H
T ss_pred hCCCCCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEccc-cc-----------------------ccCcccc-c
Confidence 9998 5999999999999999999999999999999999999942 11 1234443 3
Q ss_pred CCccccceEEEEEeCChhhHHhcCCeeEEE-EEeEEeccCCCCCCC------CCH--------HHHHHHHHHHHHHcCCC
Q psy5222 234 EGFIYGQASAALLIEGNKNIKILNKSYLAR-LLGGVINLHATASPE------PNL--------NNEISVMNSVLKQSGLK 298 (415)
Q Consensus 234 ~G~~~geGa~alvL~~~~~A~~~g~~i~a~-i~g~~~~~~~~~~~~------~~~--------~~~~~~~~~aL~~Agl~ 298 (415)
+|+++||||+++||++.+. +.++++. +.+.+...+..+.+. +++ ..+.++++++|+++|++
T Consensus 153 ~~~~~gdGa~A~vl~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~ 228 (313)
T 1zow_A 153 TAVLFGDGAGAVIIGEVSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLT 228 (313)
T ss_dssp HHTTBCEEEEEEEEEECST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ceeeeccceEEEEEEecCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 6899999999999997764 2345443 333222222211121 122 36788999999999999
Q ss_pred CCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCC
Q psy5222 299 KNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPID 378 (415)
Q Consensus 299 ~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~ 378 (415)
++|||||++|+++++..|. +.+.|+...++++ ..|..+||+.+|++.+.+..++ +++.+
T Consensus 229 ~~did~~~~H~~~~~~~d~-----~~~~lg~~~~~~~--~~~~~~Gh~~~as~~~~L~~~~---~~~~~----------- 287 (313)
T 1zow_A 229 SDDIDLFIPHQANIRIMES-----ARERLGISKDKMS--VSVNKYGNTSAASIPLSIDQEL---KNGKL----------- 287 (313)
T ss_dssp GGGCSEEEECCSCHHHHHH-----HHHHHTCCGGGBC--CCHHHHCBCGGGHHHHHHHHHH---HTTCC-----------
T ss_pred HHHCCEEEEcCCCHHHHHH-----HHHHhCCCHHHHH--HhHhhhCchHHHHHHHHHHHHH---HcCCC-----------
Confidence 9999999999999986665 3456664433444 3589999999999999887653 33322
Q ss_pred CCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 379 NQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 379 ~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+.+++++.+||.|.+.+++||+
T Consensus 288 ------------~~g~~vl~~~~G~G~t~~~~~l~ 310 (313)
T 1zow_A 288 ------------KDDDTIVLVGFGGGLTWGAMTIK 310 (313)
T ss_dssp ------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ------------CCCCEEEEEEEchhhhheEEEEE
Confidence 12478999999999999999987
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-28 Score=242.04 Aligned_cols=309 Identities=11% Similarity=-0.021 Sum_probs=205.7
Q ss_pred hcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHH
Q psy5222 72 QKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIM 151 (415)
Q Consensus 72 ~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 151 (415)
+.+++ .+|+.+|+++||+|||+++++ ++..-.|+++....... .+..........++..+
T Consensus 38 ~~~s~-~dL~a~Ai~~AL~dAGl~p~~--Vd~vI~g~~~~~~~~~~-----------------~~~~~~~g~~~~~~~~v 97 (520)
T 4egv_A 38 RGMSS-VELATEAAKAALHDCGADADT--VARAIDTVAGTRQFEIS-----------------GPASAPLGVSSNYPRSV 97 (520)
T ss_dssp -CCCH-HHHHHHHHHHHHHHTSSCHHH--HHHHCCEEEECCC-------------------------------CCHHHHH
T ss_pred CCCCH-HHHHHHHHHHHHHHhCcCHHH--cceEEEEEeeccccccc-----------------chhhhhhccccCHHHHH
Confidence 33444 468899999999999999988 77555566654221110 00111122234667889
Q ss_pred HHHhCCCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHc------------------cc
Q psy5222 152 SEIFNIRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAI------------------GA 212 (415)
Q Consensus 152 a~~lgl~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~------------------~~ 212 (415)
+..+|+.. +..++..+|+|++.+|..|++.|++|++|+||+||+|++.+.......... +.
T Consensus 98 a~~lGl~~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (520)
T 4egv_A 98 ARNIGADPAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDG 177 (520)
T ss_dssp HHHHTCCCSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC-------------------------------
T ss_pred HHHcCCCCceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccch
Confidence 99999987 778889999999999999999999999999999999976543221100000 00
Q ss_pred ccCCC----C-----------------------------------------CCCCCCc--------------------cc
Q psy5222 213 MGGKN----F-----------------------------------------YNFPKKT--------------------CR 227 (415)
Q Consensus 213 ls~~~----~-----------------------------------------~~~~~~~--------------------~~ 227 (415)
..... . ..+|+.. +.
T Consensus 178 ~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~ 257 (520)
T 4egv_A 178 IFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVD 257 (520)
T ss_dssp ---CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEET
T ss_pred hHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccC
Confidence 00000 0 0001110 11
Q ss_pred CCCCCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCC---CHHHHHHHHHHHHHHcCCCCCcc
Q psy5222 228 PFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEP---NLNNEISVMNSVLKQSGLKKNMI 302 (415)
Q Consensus 228 pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~---~~~~~~~~~~~aL~~Agl~~~dI 302 (415)
|+..-.+...++|||+++||++++.|++.|.+++++|.+++........ ..| ...+...+++++|++||++++||
T Consensus 258 p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~di 337 (520)
T 4egv_A 258 PYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDV 337 (520)
T ss_dssp TEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGE
T ss_pred CcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHC
Confidence 2222235566899999999999999999999998888877765432222 222 25788999999999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHHhc---CCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCC
Q psy5222 303 DYLNTHGSSSPLGDKIEISAIKEVYKN---HFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDN 379 (415)
Q Consensus 303 d~v~~h~~gt~~~d~~E~~al~~~~~~---~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~ 379 (415)
|++|+|+.++ ++..+..+.++- ...++++++.+..+||+.+++|+..+++++++||++..+..+.. + ++
T Consensus 338 d~~E~~dAF~-----~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~~--~-~g 409 (520)
T 4egv_A 338 AAFDLYSCFP-----FPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALVG--A-NG 409 (520)
T ss_dssp EEEEECCSSS-----HHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEEE--E-EE
T ss_pred CEEEEeCCcH-----HHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEEe--C-CC
Confidence 9999997666 355555555553 22368888999999999999999999999999999887766553 4 55
Q ss_pred CCC------cccCcccccC----CCEEEEeccCcCCceeEEEEe
Q psy5222 380 QAN------FSGKKSISIN----INNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 380 ~~~------~v~~~~~~~~----~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+. .+.+++.+|+ .+++.+.+ .|+|++++
T Consensus 410 g~~~~~~~~~l~~~~~~w~~~~~~~~~~~~~-----~~~~~~~~ 448 (520)
T 4egv_A 410 GIASKYSVGIYSTEPADWVADNSAQLQAEHD-----AQPKVAIT 448 (520)
T ss_dssp TTTTEEEEEEEESSCCCCCCCCHHHHHHHHH-----TSCCCCBC
T ss_pred CeeeeeeEEEEcCCCCCCCCCCCCccccccc-----CCCCcccc
Confidence 554 4556777786 23444444 56666654
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-27 Score=223.84 Aligned_cols=246 Identities=10% Similarity=0.042 Sum_probs=182.1
Q ss_pred CCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHH
Q psy5222 74 SPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSE 153 (415)
Q Consensus 74 ~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 153 (415)
.++..+|+++|+++||+++|+++++ ++ ++++|+..+.. .. ...+.+++.
T Consensus 57 ~~~~~~la~~Aa~~al~~ag~~~~~--id----~vi~gt~~~~~------------------------~~-p~~a~~v~~ 105 (339)
T 1mzj_A 57 DETIQVMGVAASRRALEHAGVDPAE--ID----LVVVSTMTNFV------------------------HT-PPLSVAIAH 105 (339)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSCCCC------------------------CS-SCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecCCCC------------------------CC-ChHHHHHHH
Confidence 3467899999999999999999888 77 78888543210 01 136789999
Q ss_pred HhCCC-CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCC
Q psy5222 154 IFNIR-GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKL 232 (415)
Q Consensus 154 ~lgl~-Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~ 232 (415)
.||++ +|+++++++|+|++.||..|+++|++|++|.|||+|+|. +++. + .+. .+
T Consensus 106 ~lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~-~s~~----------~-------------~~~-d~ 160 (339)
T 1mzj_A 106 ELGADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATER-MTDV----------I-------------DLA-DR 160 (339)
T ss_dssp HHTCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEE-GGGG----------S-------------CSS-CT
T ss_pred HhCCCCccEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEcc-cccc----------c-------------Ccc-cc
Confidence 99998 699999999999999999999999999999999999995 2221 1 111 24
Q ss_pred CCCccccceEEEEEeCChhhHHhcCCeeEEEE-EeEEeccCCCCCC--CC---------------CH--------HHHHH
Q psy5222 233 AEGFIYGQASAALLIEGNKNIKILNKSYLARL-LGGVINLHATASP--EP---------------NL--------NNEIS 286 (415)
Q Consensus 233 ~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i-~g~~~~~~~~~~~--~~---------------~~--------~~~~~ 286 (415)
.+|+++||||+++||++.+. ..+++.. .+.+...+..+.. .| ++ ..+.+
T Consensus 161 ~~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 235 (339)
T 1mzj_A 161 SLSFLFGDGAGAAVVGPSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVP 235 (339)
T ss_dssp TTTTTBCEEEEEEEEEEESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHH
T ss_pred ccceEeccCceEEEEEecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHH
Confidence 67999999999999997653 2344332 2222211111100 01 12 56788
Q ss_pred HHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCC-ceeeeecccccchhHhhHHHHHHHHHHHHhhcC
Q psy5222 287 VMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFS-KLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKK 365 (415)
Q Consensus 287 ~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~-~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~ 365 (415)
+++++|+++|++++|||||++|+++++..|. +.+.++...+ +++ .....+||+.+||..+.|..++ +++
T Consensus 236 ~i~~aL~~agl~~~did~v~~H~~~~~~~d~-----i~~~lg~~~~~~~~--~~~~~~Gn~~sAs~~~~L~~~~---~~g 305 (339)
T 1mzj_A 236 AAREALEVAGLTVGDLVAFVPHQANLRIIDV-----LVDRLGVPEHVVVS--RDAEDTGNTSSASVALALDRLV---RSG 305 (339)
T ss_dssp HHHHHHHTTTCCGGGCSEEEECCSCHHHHHH-----HHHHHTCCTTSEEC--CTHHHHCBCTTHHHHHHHHHHH---HHT
T ss_pred HHHHHHHHcCCCHHHCCEEEECCCCHHHHHH-----HHHHhCCCccceee--ehhhhcCchHHHHHHHHHHHHH---HcC
Confidence 9999999999999999999999999987664 5566765443 343 3356899999999988876553 444
Q ss_pred ccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 366 FIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 366 ~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+ .+.++++..+||.|.+.+++||+
T Consensus 306 ~~-----------------------~~G~~vll~~~G~G~t~~~~~l~ 330 (339)
T 1mzj_A 306 AV-----------------------PGGGPALMIGFGAGLSYAGQALL 330 (339)
T ss_dssp SS-----------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred CC-----------------------CCCCEEEEEEEchhheeEEEEEE
Confidence 32 12478999999999999999986
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=213.35 Aligned_cols=242 Identities=13% Similarity=0.141 Sum_probs=178.8
Q ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHH
Q psy5222 75 PLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEI 154 (415)
Q Consensus 75 ~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 154 (415)
++..+|++.|+++||+++|+ ++ ++ .+++++..+. .. .+ ..+.+++..
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~--id----~vi~~t~~~~--------------------~~----~p-~~a~~v~~~ 97 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ER--VD----AVVLATSTGD--------------------FC----CP-ATAPRVAAR 97 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SC--CS----EEEEECSSCS--------------------EE----ES-CSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCc--cc--CC----EEEEEeCCCC--------------------CC----CC-hHHHHHHHH
Confidence 56789999999999999998 56 66 6777754321 00 11 357899999
Q ss_pred hCCC-CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 155 FNIR-GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 155 lgl~-Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
||++ +|+++++++|+|++.||..|+++|++|++|.|||+|+|. +++. + . ++.+.
T Consensus 98 lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~-~s~~----------~-------------~-~~d~~ 152 (331)
T 2x3e_A 98 LGLVGALAFDLSAAATGFVYGLASVGSLISAGLADSALLVGVDT-FSHT----------L-------------D-PADRS 152 (331)
T ss_dssp TTCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-GGGG----------S-------------C-TTCHH
T ss_pred hCCCCCcEEEEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeec-cccC----------C-------------C-ccccc
Confidence 9998 799999999999999999999999999999999999994 2211 0 0 11234
Q ss_pred CCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCC---CCCCC------------------CH--------HHH
Q psy5222 234 EGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHAT---ASPEP------------------NL--------NNE 284 (415)
Q Consensus 234 ~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~---~~~~~------------------~~--------~~~ 284 (415)
+++++||||+++||++.++| ++..+++.. ..+++. ....| ++ ..+
T Consensus 153 ~~~~~GdGA~A~vL~~~~~a--~~~~i~~~~----~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~ 226 (331)
T 2x3e_A 153 TRALFGDGAGAVVLRAGDAE--EEGALLAFD----LGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQM 226 (331)
T ss_dssp HHHHBCCEEEEEEEEEECTT--STTBEEEEE----EEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHH
T ss_pred cceeeccccEEEEEEecCCC--CCCceEEEE----EEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHH
Confidence 68999999999999987654 344555433 222221 11111 22 567
Q ss_pred HHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhc
Q psy5222 285 ISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRK 364 (415)
Q Consensus 285 ~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~ 364 (415)
.++++++|+++|++++|||||+.|+++++..|. +.+.++...++++. ....+||+.+|+..+.+..+ +++
T Consensus 227 ~~~i~~aL~~agl~~~did~~~~H~~~~~~~d~-----~~~~lg~~~~~~~~--~~~~~Gnt~sAs~~~~L~~~---~~~ 296 (331)
T 2x3e_A 227 SDSVRRVLDRVGWQASDLHHLVPHQANTRILAA-----VADQLDLPVERVVS--NIAEVGNTVAASIPLALAHG---LRQ 296 (331)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCCCHHHHHH-----HHHHHTCCGGGBCC--CHHHHCBCGGGHHHHHHHHH---HHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHH-----HHHHcCCCHHHHhh--hHhhhCcHHHHHHHHHHHHH---HHh
Confidence 889999999999999999999999999986654 55566654334443 35789999999988776544 333
Q ss_pred CccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 365 KFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 365 ~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+.+ .+.++++..+||.|.+..+++|+
T Consensus 297 ~~~-----------------------~~G~~vll~~~G~G~~~~~~~l~ 322 (331)
T 2x3e_A 297 GIL-----------------------RDGGNMVLTGFGAGLTWGSVALR 322 (331)
T ss_dssp TCS-----------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred CCC-----------------------CCCCEEEEEEEeHHhhheeeEEE
Confidence 322 12478999999999999999986
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.93 E-value=7.7e-26 Score=215.26 Aligned_cols=248 Identities=12% Similarity=0.099 Sum_probs=177.9
Q ss_pred CCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHH
Q psy5222 74 SPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSE 153 (415)
Q Consensus 74 ~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 153 (415)
..+..+|+++|+++||+++|+++++ ++ ++++++..+.. . ...++.+++.
T Consensus 58 ~~~~~~la~~A~~~al~~ag~~~~~--id----~vi~~t~~~~~----------------~---------~~~~a~~v~~ 106 (335)
T 1u6e_A 58 DESAASMATEACRRALSNAGLSAAD--ID----GVIVTTNTHFL----------------Q---------TPPAAPMVAA 106 (335)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSCCCC----------------S---------SSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEcCCCCC----------------C---------CChHHHHHHH
Confidence 3467899999999999999999888 77 78888543210 0 0146789999
Q ss_pred HhCCC-CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCC
Q psy5222 154 IFNIR-GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKL 232 (415)
Q Consensus 154 ~lgl~-Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~ 232 (415)
.||++ +|+++++.+|+|++.||..|+++|++|++|.|||+|+|.+.. ..+|+|.
T Consensus 107 ~lgl~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~------------------------~~~~~d~- 161 (335)
T 1u6e_A 107 SLGAKGILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSP------------------------TIDMYDR- 161 (335)
T ss_dssp HHTCTTSEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGG------------------------GCCTTCT-
T ss_pred HhCCCCCcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccccc------------------------ccCcccc-
Confidence 99998 599999999999999999999999999999999999995311 1244543
Q ss_pred CCCccccceEEEEEeCChhhHHhcCCeeEEEEEeE-EeccCCCC-----------------CCCCC--------HHHHHH
Q psy5222 233 AEGFIYGQASAALLIEGNKNIKILNKSYLARLLGG-VINLHATA-----------------SPEPN--------LNNEIS 286 (415)
Q Consensus 233 ~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~-~~~~~~~~-----------------~~~~~--------~~~~~~ 286 (415)
.+++++||||+++||++.+. ++ ++..+.+. +...+... ....+ ...+.+
T Consensus 162 ~~~~~~gDGA~A~vl~~~~~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 236 (335)
T 1u6e_A 162 GNCFIFADGAAAVVVGETPF---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGD 236 (335)
T ss_dssp TTTTTBCEEEEEEEEEECSS---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHH
T ss_pred ccceEeccccEEEEEEecCC---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHH
Confidence 58999999999999997654 22 33333222 11111000 00111 236788
Q ss_pred HHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 287 VMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 287 ~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
+++++|+++|++++|||+|++|+++++..|. +.+.++-..+. .+...+..+||+.+|+..+.+..+ ++.+.
T Consensus 237 ~i~~al~~agl~~~dId~~~~H~~~~~~~~~-----~~~~lg~~~~~-~~~~~~~~~Gnt~sAs~~~~L~~~---~~~~~ 307 (335)
T 1u6e_A 237 VGRRAMDAAGVRPDQIDVFVPHQANSRINEL-----LVKNLQLRPDA-VVANDIEHTGNTSAASIPLAMAEL---LTTGA 307 (335)
T ss_dssp HHHHHHHHHTCCGGGCCEEEECCSCHHHHHH-----HHHHHTCCTTC-EECCTHHHHCBCGGGHHHHHHHHH---HHHTS
T ss_pred HHHHHHHHcCCCHHHCCEEEECCCCHHHHHH-----HHHHcCCCchh-hhhhhhhhhCcHHHHHHHHHHHHH---HHcCC
Confidence 9999999999999999999999999976554 44556644331 223346789999999865433222 22221
Q ss_pred cCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 367 IHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 367 ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+ .+.+++++++||+|++++++||+.
T Consensus 308 ~-----------------------~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 308 A-----------------------KPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp S-----------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred C-----------------------CCCCEEEEEEEehhheeEEEEEEe
Confidence 1 124789999999999999999973
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-26 Score=222.71 Aligned_cols=255 Identities=12% Similarity=0.041 Sum_probs=185.7
Q ss_pred CCCCHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccc
Q psy5222 64 KEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFM 143 (415)
Q Consensus 64 ~~~~~~~~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (415)
+.++++.....++..+|++.|+++||+++|+++++ ++ .+++++..+ . .
T Consensus 71 ~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~--id----~vi~~t~~~-~--------------------~----- 118 (382)
T 1u0m_A 71 PGFEDRNKVYEREAKSRVPAVIQRALDDAELLATD--ID----VIIYVSCTG-F--------------------M----- 118 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGG--CS----EEEEECSSS-C--------------------C-----
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH--CC----EEEEEecCC-C--------------------C-----
Confidence 35566665656678899999999999999999888 76 577764421 0 0
Q ss_pred cchHHHHHHHHhCCCC--ccccc-cccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCC
Q psy5222 144 DSNQIGIMSEIFNIRG--EGFII-GGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYN 220 (415)
Q Consensus 144 ~~~~a~~ia~~lgl~G--p~~~v-~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~ 220 (415)
....+.+++..||+++ |++++ +++|+|++.||..|+++|++|.+|.|||+|+|.. ++
T Consensus 119 ~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~-s~------------------- 178 (382)
T 1u0m_A 119 MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFC-SL------------------- 178 (382)
T ss_dssp SSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEG-GG-------------------
T ss_pred CCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEecc-ch-------------------
Confidence 1246789999999988 88999 8999999999999999999999999999999942 11
Q ss_pred CCCCcccCCCCCCC----CccccceEEEEEeCChhhHHhcCCeeEEEEEeEEe--ccCCCC------------C----CC
Q psy5222 221 FPKKTCRPFDKLAE----GFIYGQASAALLIEGNKNIKILNKSYLARLLGGVI--NLHATA------------S----PE 278 (415)
Q Consensus 221 ~~~~~~~pfd~~~~----G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~--~~~~~~------------~----~~ 278 (415)
..+|+|.+++ ++++||||+++||++.+. +|. .|.+... ..++.. . ..
T Consensus 179 ----~~~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~---~g~----~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v 247 (382)
T 1u0m_A 179 ----CYQPTDLGVGSLLCNGLFGDGIAAAVVRGRGG---TGV----RLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRV 247 (382)
T ss_dssp ----GCCTTCCSHHHHHHHHHBCEEEEEEEEETTTC---SEE----EEEEEEEEECSSCTTTEEEEEETTEEEEEECTTT
T ss_pred ----hcCcccCCHHHhhccchhcCCcEEEEEeccCC---CCc----EEEEeeeEecCChHHhcCceecCCceEEEeCcHH
Confidence 1234554433 899999999999997653 332 3444333 222221 0 11
Q ss_pred C--CHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceee-eecccccchhHhhHHHHHH
Q psy5222 279 P--NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLL-NSTKSLTGHCLYSSGIVEI 355 (415)
Q Consensus 279 ~--~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v-~~~k~~~Gh~~~asg~~~l 355 (415)
+ ....+. +++++|+++|++++|||||+.|+++++..|. +.+.++-..+++++ ...+..+||+.+|+..+.|
T Consensus 248 ~~~~~~~~~-~i~~aL~~agl~~~dId~v~~H~~~~~i~d~-----~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L 321 (382)
T 1u0m_A 248 PATMEPLAP-ALKELAGEHGWDASDLDFYIVHAGGPRILDD-----LSTFLEVDPHAFRFSRATLTEYGNIASAVVLDAL 321 (382)
T ss_dssp GGGHHHHHH-HHHHHHHTTSCCSSCCSCCEEECSHHHHHHH-----HHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHcCCCHHHCCEEEECCCCHHHHHH-----HHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHH
Confidence 2 246677 9999999999999999999999999876553 44555543333433 2467789999999987777
Q ss_pred HHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 356 IASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 356 ~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
..++ +++.+. +.++++..+||.|.+.+++||+
T Consensus 322 ~~~~---~~g~~~-----------------------~Gd~vll~~~G~G~t~~~~vl~ 353 (382)
T 1u0m_A 322 RRLF---DEGGVE-----------------------EGARGLLAGFGPGITAEMSLGC 353 (382)
T ss_dssp HHHH---HSCCCC-----------------------SSCCCEEEEEETTTEEEEEEEE
T ss_pred HHHH---HhcCCC-----------------------CCCEEEEEEEcccceeEEEEEE
Confidence 6554 333321 1366788999999999999886
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-24 Score=207.58 Aligned_cols=265 Identities=12% Similarity=0.045 Sum_probs=188.2
Q ss_pred CCCccCCCCCHHHHhcC-----CHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCC
Q psy5222 58 DLSEKKKEFILHIAQKS-----PLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPE 132 (415)
Q Consensus 58 ~~d~~~~~~~~~~~~~~-----~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~ 132 (415)
.||+.+|..+.++...+ ++..+|+++|+++||+++|+++++ ++ .+++++....
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~--id----~vi~~t~~~~---------------- 128 (374)
T 2h84_A 71 KPENSIKFRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGD--IT----HIVSVTSTGI---------------- 128 (374)
T ss_dssp SGGGCGGGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGG--CC----EEEEEESSCC----------------
T ss_pred ccccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeeCCC----------------
Confidence 45666666555555555 778999999999999999999988 77 6777754310
Q ss_pred CCCchhhcccccchHHHHHHHHhCCCC--cccccc-ccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHH
Q psy5222 133 YLSPRYAIQFMDSNQIGIMSEIFNIRG--EGFIIG-GASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHA 209 (415)
Q Consensus 133 ~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~~v~-~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~ 209 (415)
. ....+.+++..||+++ |++.+. .+|+|++.||..|+++|++|.+|.|||+|+|.+ +..
T Consensus 129 -----~-----~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~-s~~------- 190 (374)
T 2h84_A 129 -----I-----IPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVC-SLH------- 190 (374)
T ss_dssp -----C-----SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECC-GGG-------
T ss_pred -----C-----CCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEec-chh-------
Confidence 0 1146789999999997 889996 899999999999999999999999999999942 110
Q ss_pred cccccCCCCCCCCCCcccCCCCC--CCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEecc--CCC-----------
Q psy5222 210 IGAMGGKNFYNFPKKTCRPFDKL--AEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINL--HAT----------- 274 (415)
Q Consensus 210 ~~~ls~~~~~~~~~~~~~pfd~~--~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~--~~~----------- 274 (415)
+ ..|.|.+ ..++++||||+|+||++.+.+..++ ++ ++.+.+... ++.
T Consensus 191 ---~------------~~~~dr~~~~~~~lfGDGA~A~vL~~~~~~~~~~--~~-~l~~~g~~~~~~~~~~~~~~~~~~g 252 (374)
T 2h84_A 191 ---F------------SNTDGGDQMVASSIFADGSAAYIIGCNPRIEETP--LY-EVMCSINRSFPNTENAMVWDLEKEG 252 (374)
T ss_dssp ---C------------CCSSSHHHHHHHHHBCCEEEEEEEESSCCTTCCC--CE-EEEEEEEEECSSCTTSEEEEEETTE
T ss_pred ---h------------cCCCCHHHHhhhhhhccCcEEEEEecCCCcccCC--ce-eEEeeeeEEeCCCcccceeEEecCc
Confidence 0 0122211 1488999999999999877653333 33 566654431 110
Q ss_pred -CC-CCCC-----HHHHHHHHHHHHHHcC------CCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecc
Q psy5222 275 -AS-PEPN-----LNNEISVMNSVLKQSG------LKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STK 340 (415)
Q Consensus 275 -~~-~~~~-----~~~~~~~~~~aL~~Ag------l~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k 340 (415)
+. ..+. ...+.++++++|+++| ++++|||+| +|.++++..|. +.+.++-..++++++ ...
T Consensus 253 ~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~~~~i~d~-----~~~~lgl~~~k~~~s~~~~ 326 (374)
T 2h84_A 253 WNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTGGKSILMN-----IENSLGIDPKQTKNTWDVY 326 (374)
T ss_dssp EEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCCCHHHHHH-----HHHHTTCCGGGGHHHHHHH
T ss_pred EEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCCCHHHHHH-----HHHHcCCCHHHHHHHHHHH
Confidence 00 0011 3567889999999999 999999999 99999876553 445555433344432 445
Q ss_pred cccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 341 SLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 341 ~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..+||+.+|+-.+.|..++ +++. +.++++..+||.|-+.++++|+.
T Consensus 327 ~~~Gnt~sasi~~~L~~~~---~~~~-------------------------~Gd~vll~~~G~G~t~~~~ll~~ 372 (374)
T 2h84_A 327 HAYGNMSSASVIFVMDHAR---KSKS-------------------------LPTYSISLAFGPGLAFEGCFLKN 372 (374)
T ss_dssp HHHCBCTTHHHHHHHHHHH---TCSC-------------------------CCSEEEEEEEETTTEEEEEEEEE
T ss_pred HHhCCchhhHHHHHHHHHH---hhcC-------------------------CCCeEEEEEeccchhhhhhhhee
Confidence 6789999998776665543 2221 24788899999999999999874
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.4e-23 Score=222.83 Aligned_cols=273 Identities=12% Similarity=0.070 Sum_probs=192.1
Q ss_pred CCHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccc
Q psy5222 66 FILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDS 145 (415)
Q Consensus 66 ~~~~~~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (415)
+..++.+.+.....|++.|+++||++||+++++ ++ .+++++... . ...
T Consensus 678 ~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~d--Id----~ii~~t~~~---------------------~-----~~p 725 (979)
T 3tsy_A 678 LNIRQEIITAEVPKLGKEAALKALKEWGQPKSK--IT----HLVFCTTSG---------------------V-----EMP 725 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGG--CC----EEEEEESSC---------------------C-----CSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH--CC----EEEEEeeCC---------------------C-----CCC
Confidence 345555666667889999999999999999988 77 477775221 0 012
Q ss_pred hHHHHHHHHhCCCCcc---ccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCC
Q psy5222 146 NQIGIMSEIFNIRGEG---FIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFP 222 (415)
Q Consensus 146 ~~a~~ia~~lgl~Gp~---~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~ 222 (415)
..+.+++..||++++. +.++.+|++++.||..|.++|++|.++.|||+|+|..... . .
T Consensus 726 ~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~-----------~--------~ 786 (979)
T 3tsy_A 726 GADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVT-----------F--------R 786 (979)
T ss_dssp CHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTT-----------C--------C
T ss_pred cHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchh-----------e--------e
Confidence 6788999999998754 8899999999999999999999999999999999942110 0 0
Q ss_pred CCcccCCCCCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCCCC--C----------------CHHHH
Q psy5222 223 KKTCRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPE--P----------------NLNNE 284 (415)
Q Consensus 223 ~~~~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~~~--~----------------~~~~~ 284 (415)
......++...+++++||||+|+||++.+.+..++..++....+.....+..+... + ....+
T Consensus 787 ~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 866 (979)
T 3tsy_A 787 GPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENV 866 (979)
T ss_dssp CCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHH
T ss_pred CCCccCHHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHH
Confidence 00111122223467899999999999988766667777777777666554443310 0 12346
Q ss_pred HHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHHHHHHHHHHHHhh
Q psy5222 285 ISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSGIVEIIASVIQMR 363 (415)
Q Consensus 285 ~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg~~~l~~~~~~l~ 363 (415)
.++++++|+++|++++||||++.|..+++..| ++.+.++-..+++..+ .....+||+.+||=.+.|..+...++
T Consensus 867 ~~~~~~al~~agl~~~did~~~~Hq~~~~i~~-----~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~ 941 (979)
T 3tsy_A 867 EKCLTQAFDPLGISDWNSLFWIAHPGGPAILD-----AVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSL 941 (979)
T ss_dssp HHHHHHHHGGGTCCCGGGSEEEECCSCHHHHH-----HHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCcccceEEECCCChHHHH-----HHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhc
Confidence 88999999999999999999999988876444 4444455433333322 12456799999998888877655444
Q ss_pred cCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 364 KKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 364 ~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.|.. . .. -....+++..+||.|-+.++++++
T Consensus 942 ~G~~-----v-~~-------------g~~~~~~ll~~~G~G~t~~~~~l~ 972 (979)
T 3tsy_A 942 KGER-----A-TT-------------GEGLDWGVLFGFGPGLTIETVVLH 972 (979)
T ss_dssp HTTC-----S-BT-------------TTTCSEEEEEEECGGGEEEEEEEE
T ss_pred cccc-----c-cC-------------CCCcceeEEEEeCCchHHHHHHHH
Confidence 4311 0 00 011367899999999999999986
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-22 Score=194.57 Aligned_cols=251 Identities=12% Similarity=0.044 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
...+|+..|+++||+++|+++++ ++ .+++++... . . ...++.+++..|
T Consensus 112 ~~~~la~~Aa~~aL~~agl~~~~--Id----~vi~~t~~~-~--------------------~-----~p~~a~~v~~~l 159 (393)
T 1ted_A 112 HAVPLAVDVSKRALAGLPYRAAE--IG----LLVLATSTG-F--------------------I-----APGVDVAIVKEL 159 (393)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGGG--EE----EEEEEESSC-C--------------------C-----SSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEEeCC-C--------------------c-----cChHHHHHHHHc
Confidence 56799999999999999998877 65 466664321 0 0 124678999999
Q ss_pred CCCCc--cccc-cccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCC
Q psy5222 156 NIRGE--GFII-GGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKL 232 (415)
Q Consensus 156 gl~Gp--~~~v-~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~ 232 (415)
|++++ .+.+ ..+|+|++.||..|+++|++|.+|.|||+|+|.+... .. |+.+
T Consensus 160 Gl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~------------------------~~-~~~~ 214 (393)
T 1ted_A 160 GLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVN------------------------AV-FADD 214 (393)
T ss_dssp TCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGG------------------------CC-CCSS
T ss_pred CcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEecccc------------------------CC-CCCC
Confidence 99875 5777 8999999999999999999999999999999942210 00 2233
Q ss_pred CC----CccccceEEEEEeCChhhHHhcCCeeEEEEEeEEec--cCCCCC-------------CC---C--CHHHHHHHH
Q psy5222 233 AE----GFIYGQASAALLIEGNKNIKILNKSYLARLLGGVIN--LHATAS-------------PE---P--NLNNEISVM 288 (415)
Q Consensus 233 ~~----G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~--~~~~~~-------------~~---~--~~~~~~~~~ 288 (415)
++ ++++||||+|+||++.+.+..++. .+++|.+++.. .++... .. + ....+.+++
T Consensus 215 r~~~~~~~lfGDGA~A~vL~~~~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i 293 (393)
T 1ted_A 215 INDVVIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVV 293 (393)
T ss_dssp HHHHHHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHH
T ss_pred HHHhhhhhhhcCccEEEEEecCCCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHH
Confidence 43 899999999999998765422333 45677776544 444221 01 1 234678899
Q ss_pred HHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceee-eecccccchhHhhHHHHHHHHHHHHhhcCcc
Q psy5222 289 NSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLL-NSTKSLTGHCLYSSGIVEIIASVIQMRKKFI 367 (415)
Q Consensus 289 ~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v-~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~i 367 (415)
+++|+++|++++|||+|+.|.++++..|.. .+.++-..+++++ ......+||+.+|+-.+.|..++ +++.+
T Consensus 294 ~~aL~~agl~~~dId~~~~H~~~~~i~d~~-----~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~---~~g~~ 365 (393)
T 1ted_A 294 TEMLWDNGLQISDIDLWAIHPGGPKIIEQS-----VRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMV---QQAES 365 (393)
T ss_dssp HHHHHHTTCCGGGCSCEEECCSCHHHHHHH-----HHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHH---HSCSS
T ss_pred HHHHHHcCCCHhHCCEEEECCCcHHHHHHH-----HHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHH---hcCcc
Confidence 999999999999999999999999765544 3445543333433 13566789999988666553332 33322
Q ss_pred CCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 368 HPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 368 p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
. .+.++++..+||.|.+.++++|+.
T Consensus 366 ~----------------------~~Gd~vll~~~G~G~t~~~~~l~~ 390 (393)
T 1ted_A 366 A----------------------KAISTGVAFAFGPGVTVEGMLFDI 390 (393)
T ss_dssp S----------------------SSSEEEEEEEEETTTEEEEEEEEE
T ss_pred C----------------------CCCCeEEEEEeccchhhhhhheee
Confidence 0 124789999999999999999874
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=185.53 Aligned_cols=259 Identities=14% Similarity=0.103 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
...+|+.+|+++||+++|+++++ ++ .+++++..... .....+.+++..+
T Consensus 67 ~~~~La~~Aa~~al~~ag~~~~~--Id----~vi~~t~~~~~-------------------------~~p~~a~~v~~~l 115 (345)
T 3s21_A 67 QASDAATQAARKALIDANIGIEK--IG----LLINTSVSRDY-------------------------LEPSTASIVSGNL 115 (345)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGG--CC----EEEECCSCCSC-------------------------SSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeCCCCC-------------------------CCChHHHHHHHHh
Confidence 36689999999999999999998 77 67877543100 0125678999999
Q ss_pred CCC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 156 NIR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 156 gl~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
|++ .|++.++.+|+|++.||..|+++|++|.++.|||+|+|.+ +......+ .+..+ +...|++|+...
T Consensus 116 Gl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~-s~~~~~~~--~~~~~-------~~~~~~~f~~~~ 185 (345)
T 3s21_A 116 GVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETA-NLVYEKTL--ERMTS-------PDVTEEEFRNEL 185 (345)
T ss_dssp TCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC-HHHHHHHH--HHHTC-------TTCCHHHHHHHH
T ss_pred CCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEccc-chhhcccc--ccccC-------Cccchhhhhhhc
Confidence 995 6999999999999999999999999999999999999954 33322222 22222 334678888888
Q ss_pred CCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC---------CCCC--------HHHHHHHHHHHHHHcC
Q psy5222 234 EGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS---------PEPN--------LNNEISVMNSVLKQSG 296 (415)
Q Consensus 234 ~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~---------~~~~--------~~~~~~~~~~aL~~Ag 296 (415)
.++++||||+++||++.+... .+. .|.+.....++... ...+ ...+.++++++|+++|
T Consensus 186 ~~~~~GdGA~A~vl~~~~~~~-~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~g 260 (345)
T 3s21_A 186 AALTLGCGAAAMVMARSELVP-DAP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLG 260 (345)
T ss_dssp GGGGBCCEEEEEEEEEGGGST-TSC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cceeeccceeEEEEecCCCCC-CCc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 899999999999999865421 122 23444333332111 0011 1234577889999999
Q ss_pred CCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCC
Q psy5222 297 LKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESP 376 (415)
Q Consensus 297 l~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~ 376 (415)
++++|||++..|..+.+ =...+.+.++-..++++ ..-..+||+.+||-.+.|..++ +++.+
T Consensus 261 l~~~did~~v~Hq~~~~-----i~~~~~~~lgl~~ek~~--~~l~~~GNt~sasi~~~L~~~~---~~g~~--------- 321 (345)
T 3s21_A 261 WAVEELDQFVIHQVSRP-----HTAAFVKSFGIDPAKVM--TIFGEHGNIGPASVPIVLSKLK---ELGRL--------- 321 (345)
T ss_dssp CCGGGCSEEEECCSCHH-----HHHHHHHHHTCCGGGBC--CCHHHHCBCGGGHHHHHHHHHH---HHTCC---------
T ss_pred CCHHHCCEEEeCCCCHH-----HHHHHHHHcCcCHHHce--eeHhhcCchHHHHHHHHHHHHH---HcCCC---------
Confidence 99999999999955543 34455555654333333 2234679999998777665543 34433
Q ss_pred CCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 377 IDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 377 ~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+.+.++..+||.|-+..+++|+
T Consensus 322 --------------~~Gd~vll~~~G~G~t~~~~~l~ 344 (345)
T 3s21_A 322 --------------KKGDRIALLGIGSGLNCSMAEVV 344 (345)
T ss_dssp --------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred --------------CCCCEEEEEEEChhhhheEEEEE
Confidence 12467899999999999999986
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=179.14 Aligned_cols=240 Identities=15% Similarity=0.160 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
+...|+.+|+++||+++|+++++ ++ .+++++..+.. .....+.+++..+
T Consensus 64 ~~~~la~~Aa~~al~~ag~~~~~--Id----~vi~~t~~~~~-------------------------~~p~~a~~v~~~l 112 (333)
T 4dfe_A 64 TTSDLAFIASQRAIEAADIDPQS--ID----LIIVATSTPDF-------------------------VFPSTACLLQNKL 112 (333)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSSCSS-------------------------SBSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeCCCCC-------------------------CCCcHHHHHHHHh
Confidence 46789999999999999999988 77 68888543211 0124578999999
Q ss_pred CC--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 156 NI--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 156 gl--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
|+ +.|+++++.+|+|++.||..|+++|++|.++.+||+|+|.+.. ..-++.+.
T Consensus 113 gl~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~-------------------------~~~~~d~~ 167 (333)
T 4dfe_A 113 GIRNHGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSR-------------------------ILDFKDRT 167 (333)
T ss_dssp TCCSCCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-------------------------GCCTTCTT
T ss_pred CCCCCCcEEEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeecccc-------------------------ccCccccc
Confidence 99 5699999999999999999999999999999999999994211 01122234
Q ss_pred CCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC-------------------CCC--------CHHHHHH
Q psy5222 234 EGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS-------------------PEP--------NLNNEIS 286 (415)
Q Consensus 234 ~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~-------------------~~~--------~~~~~~~ 286 (415)
.++++||||+|+||++.+. ..++. ....+++... ... ....+.+
T Consensus 168 ~~~lfGDGA~A~vl~~~~~-----~~i~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 238 (333)
T 4dfe_A 168 TCVLFGDGAGAVILQASDE-----PGVLA----SALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEK 238 (333)
T ss_dssp TTTTBCEEEEEEEEEEESS-----CSEEE----EEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHH
T ss_pred ceeeeccccEEEEEEEcCC-----CCeEE----EEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHH
Confidence 6789999999999997652 12222 2111111100 001 1255678
Q ss_pred HHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 287 VMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 287 ~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
+++++|+++|++++|||++.+|..+.+ -..++.+.++-..++++. ....+||+.+|+=.+.|..+ ++++.
T Consensus 239 ~i~~~l~~~gl~~~did~~~~Hq~~~~-----i~~~~~~~lgl~~~~~~~--~l~~~GNt~sasi~~~L~~~---~~~g~ 308 (333)
T 4dfe_A 239 VAVEALEKANLSAEQIDWLIPHQANIR-----IMQSTCRKLGLPQERMIV--TVGEHGNTSAASIPLALDVA---VRDGR 308 (333)
T ss_dssp HHHHHHHHTTCCGGGCSEEEECCSCHH-----HHHHHHHHTTCCGGGBCC--CHHHHCBCGGGHHHHHHHHH---HHTTC
T ss_pred HHHHHHHHcCCCHHHCCEEEEcCCCHH-----HHHHHHHHhCCCHHHhhh--hHHhcCchHHHHHHHHHHHH---HHcCC
Confidence 899999999999999999999966554 344555556543333433 34567999999866655443 34443
Q ss_pred cCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 367 IHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 367 ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+ .+.+.++..+||.|-+.+++|++
T Consensus 309 ~-----------------------~~Gd~vll~~~G~G~t~~~~ll~ 332 (333)
T 4dfe_A 309 I-----------------------KRGQNVLIEGVGGGFTWGASVIR 332 (333)
T ss_dssp S-----------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred C-----------------------CCCCEEEEEEEchhheeEEEEEE
Confidence 3 12467888999999999999986
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.7e-18 Score=160.70 Aligned_cols=240 Identities=15% Similarity=0.171 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++|+++++ ++ .+++++..+.. .. ...+.+++..+
T Consensus 57 ~~~~La~~Aa~~aL~~ag~~~~~--Id----~vi~~t~~~~~------------------------~~-p~~a~~v~~~l 105 (323)
T 3il3_A 57 TVATMGFEAAKNAIEAAQINPQD--IE----LIIVATTSHSH------------------------AY-PSAACQVQGLL 105 (323)
T ss_dssp CHHHHHHHHHHHHHHHHCCCGGG--CC----EEEEECSCCSC------------------------SS-SCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeCCCCC------------------------CC-ccHHHHHHHHh
Confidence 36799999999999999999998 77 68887543210 01 13678999999
Q ss_pred CCC-CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCC
Q psy5222 156 NIR-GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAE 234 (415)
Q Consensus 156 gl~-Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~ 234 (415)
|++ .|++.++.+|+|++.||..|.++|++|.++.+||+|+|.+ +. ..++ ..+..
T Consensus 106 Gl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~---------------s~---------~~~~-~d~~~ 160 (323)
T 3il3_A 106 NIDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLN---------------SR---------KLDE-TDRST 160 (323)
T ss_dssp TCSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG---------------GG---------SCCT-TCTTT
T ss_pred CCCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeecc---------------cc---------ccCc-ccccc
Confidence 996 4899999999999999999999999999999999999942 10 0111 11235
Q ss_pred CccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC-----------------CCCC--------HHHHHHHHH
Q psy5222 235 GFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS-----------------PEPN--------LNNEISVMN 289 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~-----------------~~~~--------~~~~~~~~~ 289 (415)
.+++||||+|+||++.+ +..++.. ...+++... ...+ ...+.++++
T Consensus 161 ~~lfGDGA~A~vl~~~~-----~~~i~~~----~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~ 231 (323)
T 3il3_A 161 VVLFGDGAGAVILEASE-----QEGIIST----HLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVE 231 (323)
T ss_dssp TTTBCEEEEEEEEEEES-----SCCEEEE----EEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHH
T ss_pred ccccccceEEEEEEEcC-----CCCeEEE----EEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHH
Confidence 67899999999999754 1222222 111111100 0001 233467889
Q ss_pred HHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCC
Q psy5222 290 SVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHP 369 (415)
Q Consensus 290 ~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~ 369 (415)
++|+++|++++|||++..|-.+. .=...+.+.++-..++++. .-..+||+.+||=.+.|..+ ++++.+
T Consensus 232 ~~l~~~gl~~~did~~v~Hq~~~-----~i~~~~~~~lgl~~ek~~~--~l~~~GNt~sasi~~~L~~~---~~~g~~-- 299 (323)
T 3il3_A 232 ETLLANNLDKKDLDWLVPHQANL-----RIITATAKKLEMDMSQVVV--TLDKYANNSAATVPVALDEA---IRDGRI-- 299 (323)
T ss_dssp HHHHTTTCCTTTCCEEEECCSCH-----HHHHHHHHHTTCCGGGBCC--CHHHHCBCGGGHHHHHHHHH---HHTTSS--
T ss_pred HHHHHcCCCHHHCCEEEEcCCCH-----HHHHHHHHHcCcCHHHhhc--cHhhcCchHHHHHHHHHHHH---HHcCCC--
Confidence 99999999999999999994443 3345555656544334443 23456999999866666543 344433
Q ss_pred CCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 370 NLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 370 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+.+.++..+||.|-+-+++|++
T Consensus 300 ---------------------~~Gd~vll~~~G~G~t~~~~~l~ 322 (323)
T 3il3_A 300 ---------------------QRGQLLLLEAFGGGWTWGSALVR 322 (323)
T ss_dssp ---------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ---------------------CCCCEEEEEEEehhheeEEEEEE
Confidence 12467889999999999999986
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.6e-18 Score=163.30 Aligned_cols=243 Identities=14% Similarity=0.108 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++|+++++ ++ .+++++..... . + ...+.+++..+
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~d--Id----~vi~~t~t~~~--------------------~----~-p~~a~~v~~~L 164 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRER--IG----AVLCACSNMQR--------------------A----Y-PAMAIEVQNAL 164 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGG--EE----EEEEESSCCSC--------------------S----B-SCHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecCCCC--------------------C----c-cHHHHHHHHHh
Confidence 46799999999999999999888 76 57777543111 0 1 24678999999
Q ss_pred CCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCC
Q psy5222 156 NIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEG 235 (415)
Q Consensus 156 gl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G 235 (415)
|++.|++.|+.+|++++.||..|.++|++|.++.|||+|+|.+ +. ...+.| +...
T Consensus 165 Gl~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~---------------S~---------~~d~~d-r~t~ 219 (392)
T 3led_A 165 GLGGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEIC---------------SG---------HLNFRD-RDSH 219 (392)
T ss_dssp TCCSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG---------------GG---------GCCTTC-TTTT
T ss_pred CCCCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhc---------------CC---------cCCcCc-ccCC
Confidence 9988999999999999999999999999999999999999942 10 011222 2357
Q ss_pred ccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC----------------------CCCCH--------HHHH
Q psy5222 236 FIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS----------------------PEPNL--------NNEI 285 (415)
Q Consensus 236 ~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~----------------------~~~~~--------~~~~ 285 (415)
+++||||+|+||++.+... .+ ..|.+....+++... ...++ ..+.
T Consensus 220 ~lFGDGA~A~vl~~~~~~~-~~----~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~ 294 (392)
T 3led_A 220 FIFGDVATAAIVERADDAQ-GG----WSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVS 294 (392)
T ss_dssp TTBCEEEEEEEEEEGGGCC-SS----EEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHH
T ss_pred cccccccEEEEEEecCCCC-CC----CeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHH
Confidence 8999999999998765310 11 223333322221100 00111 2345
Q ss_pred HHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHH-Hhc--CCCceeeeecccccchhHhhHHHHHHHHHHHHh
Q psy5222 286 SVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEV-YKN--HFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQM 362 (415)
Q Consensus 286 ~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~-~~~--~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l 362 (415)
++++++|+++|++++|||++..|-.+. .=..++.+. ++- ..++++ ..-..+||+.+||=.+.|-. +
T Consensus 295 ~~i~~~L~~~gl~~~dId~~v~Hqan~-----~i~~~~~~~llgl~~~~~k~~--~~l~~~GNtssAsipl~L~~----~ 363 (392)
T 3led_A 295 EMIIEHAREIGIDPHGLKRMWLHQANI-----NMNEIIGRKVLGRDPTRDENV--IILDDYANTSSAGSIIAFHK----H 363 (392)
T ss_dssp HHHHHHHHHTTCCGGGCSEEEECSSCH-----HHHHHHHHHHHTSCCCTTTBC--CCHHHHCBCGGGHHHHHHHH----C
T ss_pred HHHHHHHHHcCCCHHHCcEEEEcCCCH-----HHHHHHHHHhcCCCCCHHHHH--HHHhhhCccHHHHHHHHHHH----H
Confidence 678999999999999999999994333 333444444 342 112222 23355799988865444422 1
Q ss_pred hcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 363 RKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 363 ~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
.+. . .+.+.++..+||.|-+.+++||+.
T Consensus 364 -~~~---------~--------------~~Gd~vll~gfG~G~t~~~~ll~~ 391 (392)
T 3led_A 364 -QDD---------M--------------AQGDLGLICSFGAGYSAGTVFVQK 391 (392)
T ss_dssp -CTT---------C--------------CTTCEEEEEEEETTTEEEEEEEEE
T ss_pred -hCC---------C--------------CCCCEEEEEEEChhhEeEEEEEEE
Confidence 111 1 124788999999999999999985
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.78 E-value=5.7e-18 Score=163.69 Aligned_cols=273 Identities=11% Similarity=0.058 Sum_probs=182.9
Q ss_pred CCccCCCCCHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchh
Q psy5222 59 LSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRY 138 (415)
Q Consensus 59 ~d~~~~~~~~~~~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (415)
||+.++.+..+....+.....|+..|+++||+++|+++++ ++ .+++++..+.
T Consensus 80 ~~~~~~~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~--Id----~li~~t~~~~---------------------- 131 (387)
T 3a5r_A 80 AAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSK--IT----HLIVCCLAGV---------------------- 131 (387)
T ss_dssp HSSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGG--CC----EEEEEESSCC----------------------
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEecCCC----------------------
Confidence 3444445566666666788899999999999999999888 77 5777744320
Q ss_pred hcccccchHHHHHHHHhCCCCc---cccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccC
Q psy5222 139 AIQFMDSNQIGIMSEIFNIRGE---GFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGG 215 (415)
Q Consensus 139 ~~~~~~~~~a~~ia~~lgl~Gp---~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~ 215 (415)
.....+.+++..||+++. .+.+..+|+|++.||..|.++|++|.++.|||+|+|.+ +. .
T Consensus 132 ----~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~-s~----------~--- 193 (387)
T 3a5r_A 132 ----DMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMT-TT----------C--- 193 (387)
T ss_dssp ----EESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECC-TT----------T---
T ss_pred ----CCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEecc-ch----------h---
Confidence 012467899999999875 78899999999999999999999999999999999942 21 0
Q ss_pred CCCCCCCCCcccCCCC----CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCC--------------C-
Q psy5222 216 KNFYNFPKKTCRPFDK----LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATA--------------S- 276 (415)
Q Consensus 216 ~~~~~~~~~~~~pfd~----~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~--------------~- 276 (415)
...|+|. ...++++||||+|+||++.+.. .......++.+.+....+.. .
T Consensus 194 ---------~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~--~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~ 262 (387)
T 3a5r_A 194 ---------FRGPSETHLDSMIGQAILGDGAAAVIVGADPDL--TVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFH 262 (387)
T ss_dssp ---------CCCCCSSCCSSTTHHHHBCCEEEEEEEESSCCT--TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEE
T ss_pred ---------hcCCCccchhhccccceeccceeEEEEecCCCc--cccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEE
Confidence 1123332 2357899999999999876531 10111134444332211110 0
Q ss_pred CCC-----CHHHHHHHHHHHHHHcCCC-CCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhh
Q psy5222 277 PEP-----NLNNEISVMNSVLKQSGLK-KNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYS 349 (415)
Q Consensus 277 ~~~-----~~~~~~~~~~~aL~~Agl~-~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~a 349 (415)
... ....+.++++++|+++|++ .+|| ++..|..+.. =..++.+.++-..+++..+ .....+||+.+|
T Consensus 263 ~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~-----i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssA 336 (387)
T 3a5r_A 263 LYKTVPTLISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPA-----ILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSA 336 (387)
T ss_dssp ECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHH-----HHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGG
T ss_pred ecchHHHHHHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCHH-----HHHHHHHHcCCChHHhHHHHHHHHhcCCcchh
Confidence 011 1344567899999999998 8888 8999955543 3344555565433334332 345678999999
Q ss_pred HHHHHHHHHHHHh-hcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 350 SGIVEIIASVIQM-RKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 350 sg~~~l~~~~~~l-~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+-.+.|..++..= +.|.+ .+ . + ..++++..+||.|-+..+++|+-
T Consensus 337 si~~~L~~~~~~g~~~G~~-------~~-G--------~----~~d~vll~~fG~G~t~~~~ll~~ 382 (387)
T 3a5r_A 337 TVFFIMDEMRKKSLENGQA-------TT-G--------E----GLEWGVLFGFGPGITVETVVLRS 382 (387)
T ss_dssp HHHHHHHHHHHHHHHTTCS-------BT-T--------T----TCSEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHHHHHHHhccccCCC-------CC-C--------C----CcceEEEEEecCcceeeehhhee
Confidence 9888776665432 11111 01 0 0 02688999999999999988863
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7.5e-18 Score=160.81 Aligned_cols=245 Identities=14% Similarity=0.107 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++|+++++ ++ .+++++..+.. .. ...+.+++..+
T Consensus 73 ~~~~La~~Aa~~aL~~agl~~~d--Id----~vi~~t~~~~~------------------------~~-p~~a~~v~~~l 121 (359)
T 3h78_A 73 AVSALMVPAARQAIEAAGLLPED--ID----LLLVNTLSPDH------------------------HD-PSQACLIQPLL 121 (359)
T ss_dssp CTHHHHHHHHHHHHHHTTCCGGG--CC----EEEEECSSCSS------------------------SB-SCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCCHHH--CC----EEEEEeCCCCC------------------------CC-CcHHHHHHHHc
Confidence 35689999999999999999998 77 67877543210 01 14678999999
Q ss_pred CCCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCC-CC
Q psy5222 156 NIRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDK-LA 233 (415)
Q Consensus 156 gl~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~-~~ 233 (415)
|++. |.+.++.+|+|++.||..|.++|++|.++.|||+|+|.+... .++-|. +.
T Consensus 122 Gl~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~------------------------~~~~d~~~~ 177 (359)
T 3h78_A 122 GLRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKR------------------------MDCSDRGRN 177 (359)
T ss_dssp TCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGG------------------------CCCSTTTHH
T ss_pred CCCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhccc------------------------CCccccccc
Confidence 9975 889999999999999999999999999999999999942110 011110 12
Q ss_pred CCccccceEEEEEeCChhhHHhcCCeeEEEEEeEE-ec-----cC--CC-CCC--------------CCC--------HH
Q psy5222 234 EGFIYGQASAALLIEGNKNIKILNKSYLARLLGGV-IN-----LH--AT-ASP--------------EPN--------LN 282 (415)
Q Consensus 234 ~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~-~~-----~~--~~-~~~--------------~~~--------~~ 282 (415)
..+++||||+|+||++.+. .+..++....... .. .. +. ... ..+ ..
T Consensus 178 t~~lfGDGAaA~vl~~~~~---~~~~i~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~ 254 (359)
T 3h78_A 178 LSILLGDGAGAVVVSAGES---LEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQ 254 (359)
T ss_dssp HHTTBCEEEEEEEEECCSC---SSSEEEEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHH
T ss_pred ccceecceeEEEEEEecCC---CCCceEEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHH
Confidence 3477999999999997642 1223332222211 00 00 00 000 001 22
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHh
Q psy5222 283 NEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQM 362 (415)
Q Consensus 283 ~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l 362 (415)
.+.++++++|+++|++++|||++..|-.+. .=...+.+.++-..++++. .-..+||+.+|+=.+.|..++
T Consensus 255 ~~~~~i~~~L~~~gl~~~did~~v~Hq~n~-----~i~~~~~~~lgl~~ek~~~--~l~~~GNt~sAsi~l~L~~~~--- 324 (359)
T 3h78_A 255 TLVRIAGEMLAAHELTLDDIDHVICHQPNL-----RILDAVQEQLGIPQHKFAV--TVDRLGNMASASTPVTLAMFW--- 324 (359)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSEEEECCSCH-----HHHHHHHHHHTCCGGGBCC--CHHHHCBCGGGHHHHHHHHHG---
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCCCH-----HHHHHHHHHhCcCHHHhhh--hhhcccchHHHHHHHHHHHHH---
Confidence 346788999999999999999999994443 3345566666644334443 234569999998666655432
Q ss_pred hcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 363 RKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 363 ~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+. + .+.+.++..+||.|-+.++++|+
T Consensus 325 ~~--l-----------------------~~Gd~vll~~fG~G~t~~~~ll~ 350 (359)
T 3h78_A 325 PD--I-----------------------QPGQRVLVLTYGSGATWGAALYR 350 (359)
T ss_dssp GG--S-----------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred Hh--C-----------------------CCCCEEEEEEEchhhhheeeeEE
Confidence 21 1 12367888999999999999986
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2.4e-17 Score=157.87 Aligned_cols=246 Identities=12% Similarity=0.083 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++|+++++ ++ .+++++..... .....+.+++..+
T Consensus 79 ~~~~La~~Aa~~aL~~ag~~~~~--Id----~vi~~t~~~~~-------------------------~~p~~a~~v~~~l 127 (365)
T 3gwa_A 79 TAADLAYEAARKLFAQGAVGADQ--VD----FVILCTQAPDY-------------------------VLPTSACMLQHRL 127 (365)
T ss_dssp CHHHHHHHHHHHHHHTTSCCGGG--CC----EEEEEESSCSC-------------------------SBSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeCCCCC-------------------------CCCcHHHHHHHHc
Confidence 36789999999999999999998 77 67777533110 0124578999999
Q ss_pred CCC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 156 NIR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 156 gl~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
|+. .+.+.++.+|+|++.||..|.++|++|.++.|||+|+|.+... ..+.| +.
T Consensus 128 Gl~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~------------------------~~~~d-r~ 182 (365)
T 3gwa_A 128 GIPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKY------------------------LHPLD-KS 182 (365)
T ss_dssp TCCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGG------------------------SCTTC-HH
T ss_pred CCCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhcc------------------------CCccc-cc
Confidence 997 5899999999999999999999999999999999999942110 01111 12
Q ss_pred CCccccceEEEEEeCChhhHHhcCCeeEEEEEeEE-ec-------cCCCCC-C---------------------CCC---
Q psy5222 234 EGFIYGQASAALLIEGNKNIKILNKSYLARLLGGV-IN-------LHATAS-P---------------------EPN--- 280 (415)
Q Consensus 234 ~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~-~~-------~~~~~~-~---------------------~~~--- 280 (415)
..+++||||+|+||++.+.. ...+.....+.. .. ..+... . ..+
T Consensus 183 ~~~lfGDGAaA~vl~~~~~~---~~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~ 259 (365)
T 3gwa_A 183 VRTLFGDGASATAVIAEHGE---LERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAE 259 (365)
T ss_dssp HHTTBCCEEEEEEEEEECSS---SCSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHH
T ss_pred ccccccceeEEEEEEecCCC---CCceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHH
Confidence 35689999999999875421 011222221111 00 001000 0 001
Q ss_pred -----HHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHH
Q psy5222 281 -----LNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEI 355 (415)
Q Consensus 281 -----~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l 355 (415)
...+.++++++|+++|++++|||++..|-.+. .=...+.+.++-..++++ ..-..+||+.+||=.+.|
T Consensus 260 v~~~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~-----~i~~~~~~~Lgl~~ek~~--~~l~~~GNtssAsipl~L 332 (365)
T 3gwa_A 260 VMAFSLAEVPRAADRLLALAGEPRENIDCFVLHQANR-----FMLDALRKKMKIPEHKFP--VLMEHCGNTVSSTLPLAL 332 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCH-----HHHHHHHHHHTCCGGGSC--CCCTTTCBCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH-----HHHHHHHHHhCCCHHHHH--HHHhcccchHHHHHHHHH
Confidence 23446788999999999999999999994433 345566666664433444 233567999999866544
Q ss_pred HHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 356 IASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 356 ~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
..+ ++++.+ .+.+.++..+||.|-+.+++||+
T Consensus 333 ~~~---~~~g~~-----------------------~~Gd~vll~~fG~G~t~~~~ll~ 364 (365)
T 3gwa_A 333 ETM---RANGTL-----------------------ARGMRLMLLGFGVGYSWAGCLVN 364 (365)
T ss_dssp HHH---HHTTCC-----------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred HHH---HHcCCC-----------------------CCCCEEEEEEEehhheeEEEEEE
Confidence 433 344433 12478899999999999999986
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-17 Score=159.47 Aligned_cols=243 Identities=11% Similarity=0.063 Sum_probs=163.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++|+++++ ++ .+++++.... .| .. ..++.+++..+
T Consensus 53 ~~~~La~~Aa~~aL~~ag~~~~d--Id----~vi~~t~~~~------------------~~----d~--~~~a~~v~~~l 102 (357)
T 3s3l_A 53 APPRMAARAARAALGRGDVDPAD--VS----LVLHSSLWFQ------------------GI----DL--WPAASYVAHEA 102 (357)
T ss_dssp SHHHHHHHHHHHHHHHTTCCGGG--EE----EEEEECSSCC------------------SS----SS--SCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeccCC------------------Cc----cc--ccHHHHHHHHh
Confidence 46789999999999999998888 76 5777743200 00 00 03477899999
Q ss_pred CCCC-ccccccccchhHHHHHHHHHHHHHcCCCC--eEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCC
Q psy5222 156 NIRG-EGFIIGGASASGNIGIIHGMRLIQNNIVD--ACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKL 232 (415)
Q Consensus 156 gl~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d--~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~ 232 (415)
|++. |.+.|+.+|++++.||..|.++|++|.++ .|||+|+|.+..+ ....++.
T Consensus 103 G~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~-----------------------~~~~~~~- 158 (357)
T 3s3l_A 103 VGRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGP-----------------------RIDRWNS- 158 (357)
T ss_dssp TCSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTT-----------------------TCCTTTS-
T ss_pred CCCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEeccccc-----------------------ccccccc-
Confidence 9975 88999999999999999999999999999 9999999942210 0111222
Q ss_pred CCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCC---------C--C------CCC---------------
Q psy5222 233 AEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATA---------S--P------EPN--------------- 280 (415)
Q Consensus 233 ~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~---------~--~------~~~--------------- 280 (415)
+..+++||||+|+||++.+. +. .|.++...+++.. . . ...
T Consensus 159 ~~~~lfGDGA~A~vl~~~~~----~~----~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 230 (357)
T 3s3l_A 159 VDVTMYGDGAAALVLSTRDG----FA----RVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLP 230 (357)
T ss_dssp SSSCCBCCEEEEEEEESSCC----SE----EEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCT
T ss_pred cCCcccccccEEEEEecCCC----CC----eEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchh
Confidence 35788999999999987542 11 2333333222211 0 0 000
Q ss_pred ------HHHHHHHHHHHHHHcCCCCCcccEEEe-cCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHH
Q psy5222 281 ------LNNEISVMNSVLKQSGLKKNMIDYLNT-HGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIV 353 (415)
Q Consensus 281 ------~~~~~~~~~~aL~~Agl~~~dId~v~~-h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~ 353 (415)
...+.++++++|+++|++++|||++.+ |-.... .+ ++.+.++-..++++. ..-..+||+.+|+=.+
T Consensus 231 ~~~~~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~-----~~~~~lgl~~ek~~~-~~~~~~GNt~aAsipl 303 (357)
T 3s3l_A 231 DLTHRYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GH-----ELHDLLGLPDERTSW-AYGRTTGHVGAGDQYA 303 (357)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SC-----CHHHHHTSCGGGBTH-HHHHHHCBCTTCHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HH-----HHHHHcCCCHHHhHH-HhccccccchHhHHHH
Confidence 123567889999999999999999996 865554 33 334445533223332 2223468888887665
Q ss_pred HHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 354 EIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 354 ~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.|..+ ++.+.+ .+.+.++..+||.|-+.+++||+
T Consensus 304 ~L~~~---~~~g~l-----------------------~~Gd~vll~~fG~G~t~~a~ll~ 337 (357)
T 3s3l_A 304 GLAHL---VENALV-----------------------QPGDRVLLFGGGAGYTCTAAVVE 337 (357)
T ss_dssp HHHHH---HHTTCC-----------------------CTTCEEEEECCBTTTEEEEEEEE
T ss_pred HHHHH---HHcCCC-----------------------CCCCEEEEEEEchhhhheeeeEE
Confidence 55443 333433 12478899999999999999987
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.2e-17 Score=156.39 Aligned_cols=244 Identities=13% Similarity=0.045 Sum_probs=165.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..|+++||+++|+++++ ++ .+++++..+.. .....+.+++..+|
T Consensus 66 ~~~La~~Aa~~aL~~agi~~~~--Id----~vi~~t~~~~~-------------------------~~p~~a~~v~~~lG 114 (354)
T 4efi_A 66 AGDLCRKAGEKLLAGLGWQADS--ID----ALIFVSQTPNY-------------------------RLPATAFVLQAELD 114 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSSCSC-------------------------SSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeCCCCC-------------------------CCCcHHHHHHHHcC
Confidence 6789999999999999999988 77 68887543211 01246789999999
Q ss_pred C--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCC
Q psy5222 157 I--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAE 234 (415)
Q Consensus 157 l--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~ 234 (415)
+ +.|.+.++.+|+|++.||..|.++|++|.++.|||+|+|.+... ..+-| +..
T Consensus 115 l~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~------------------------~~~~d-~~~ 169 (354)
T 4efi_A 115 LPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKM------------------------IDPTD-RST 169 (354)
T ss_dssp CCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGG------------------------CCTTC-HHH
T ss_pred cCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhccc------------------------CCccc-ccc
Confidence 9 35899999999999999999999999999999999999942110 01111 123
Q ss_pred CccccceEEEEEeCChhhHHhcCCeeEEEEEeEEec-------cCCCCC----------------CCCC--------HHH
Q psy5222 235 GFIYGQASAALLIEGNKNIKILNKSYLARLLGGVIN-------LHATAS----------------PEPN--------LNN 283 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~-------~~~~~~----------------~~~~--------~~~ 283 (415)
.+++||||+|+||++.+.. + .+...+...+.. ..+... ...+ ...
T Consensus 170 ~~lfGDGA~A~vl~~~~~~---~-~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~ 245 (354)
T 4efi_A 170 SLLFGDAGTMTALETSNGD---A-AAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNA 245 (354)
T ss_dssp HTTBCCEEEEEEEEECCSC---C-EEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHH
T ss_pred ccccccceeEEEEeecCCC---C-ceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHH
Confidence 5789999999999875421 1 111122111100 000000 0011 234
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhh
Q psy5222 284 EISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMR 363 (415)
Q Consensus 284 ~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~ 363 (415)
+.++++++|+++|++++|||++..|-.+. .=..++.+.++-..++++. .-..+||+.+|+=.+.|..++ +
T Consensus 246 ~~~~i~~~l~~~gl~~~did~~v~Hq~~~-----~i~~~~~~~Lgl~~ek~~~--~l~~~GNt~sasi~~~L~~~~---~ 315 (354)
T 4efi_A 246 VPKLVSRTLDIAGRDKDSYDAFLFHQANL-----FMLKHLAKKAGLPAERVPV--NIGEYGNTSCASIPLLITTEL---K 315 (354)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCCCH-----HHHHHHHHHTTCCGGGSCC--CHHHHCBCGGGHHHHHHHHHS---H
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCCCH-----HHHHHHHHHhCcCHHHHHH--HHhhhCcHHHHHHHHHHHHHH---H
Confidence 56788999999999999999999994443 3345555666543333332 236679999998666655433 2
Q ss_pred cCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 364 KKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 364 ~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
++.+ .+.+.++..+||.|-+.+++||+
T Consensus 316 ~g~~-----------------------~~Gd~vll~~fG~G~t~~~~ll~ 342 (354)
T 4efi_A 316 DRLK-----------------------EETLQLGMFGFGVGYSWASAALA 342 (354)
T ss_dssp HHHH-----------------------HSCEEEEEEEEETTTEEEEEEEE
T ss_pred hCCC-----------------------CCCCEEEEEEEchhhhheeeEEE
Confidence 2222 12367889999999999999987
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.75 E-value=2.6e-17 Score=160.12 Aligned_cols=266 Identities=13% Similarity=0.050 Sum_probs=178.0
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHH
Q psy5222 69 HIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQI 148 (415)
Q Consensus 69 ~~~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 148 (415)
+..+.++....|+..|+++||+++|+++++ ++ .+++++..+. .....+
T Consensus 117 r~~~~~~~~~~La~~Aa~~AL~~agl~~~~--Id----~li~~t~~~~--------------------------~~p~~a 164 (413)
T 1xes_A 117 RQAMLAMEVPRLAKEAAEKAIQEWGQSKSG--IT----HLIFCSTTTP--------------------------DLPGAD 164 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCGGG--CC----EEEEEESCCC--------------------------EESCHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEEeCCC--------------------------ccchHH
Confidence 333444577899999999999999999888 77 5777754310 012457
Q ss_pred HHHHHHhCCCCc---cccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCc
Q psy5222 149 GIMSEIFNIRGE---GFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKT 225 (415)
Q Consensus 149 ~~ia~~lgl~Gp---~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 225 (415)
.+++..||++++ .+.+..+|+|++.||..|.++|++|.+|.|||+|+|.+.. .+. ++.
T Consensus 165 ~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~-----------~~~------~~~-- 225 (413)
T 1xes_A 165 FEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAV-----------TFR------GPS-- 225 (413)
T ss_dssp HHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTT-----------TCC------CCC--
T ss_pred HHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhh-----------hhc------CCC--
Confidence 899999999874 7889999999999999999999999999999999995221 010 011
Q ss_pred ccCCCCCCCCccccceEEEEEeCChhhHHhcC-CeeEEEEEeEEeccCCC--C------------C-CCC-----CHHHH
Q psy5222 226 CRPFDKLAEGFIYGQASAALLIEGNKNIKILN-KSYLARLLGGVINLHAT--A------------S-PEP-----NLNNE 284 (415)
Q Consensus 226 ~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g-~~i~a~i~g~~~~~~~~--~------------~-~~~-----~~~~~ 284 (415)
-++|+....++++||||+|+||++.+.. + .....++.+.+....+. . . ... ....+
T Consensus 226 d~~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~ 302 (413)
T 1xes_A 226 ETHLDSLVGQALFGDGASALIVGADPIP---QVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANI 302 (413)
T ss_dssp TTCHHHHHHHHHBCCEEEEEEEESSCCT---TTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHH
T ss_pred ccchhhcccceeEecccEEEEEecCCCc---cccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHH
Confidence 1344445578999999999999876531 2 11113444433211110 0 0 011 13456
Q ss_pred HHHHHHHHHHcCCC-CCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHHHHHHHHHHHHh
Q psy5222 285 ISVMNSVLKQSGLK-KNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSGIVEIIASVIQM 362 (415)
Q Consensus 285 ~~~~~~aL~~Agl~-~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg~~~l~~~~~~l 362 (415)
.++++++|+++|++ .+|| ++.+|..+.+ =..++.+.++-..+++..+ .....+||+.+|+-.+.|..++..=
T Consensus 303 ~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~-----i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g 376 (413)
T 1xes_A 303 ENCMVEAFSQFKISDWNKL-FWVVHPGGRA-----ILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKAS 376 (413)
T ss_dssp HHHHHHHHGGGTCCCGGGS-EEEECCSCHH-----HHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCccce-eEEECCCCHH-----HHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhc
Confidence 78899999999998 7888 7999955443 3444556666443344432 3456789999999888777665432
Q ss_pred -hcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 363 -RKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 363 -~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+.|.+ .+ . + ..++++..+||.|-+..++||+.
T Consensus 377 ~~~G~~-------~~-G--------~----~~d~vll~~fG~G~t~~~~ll~~ 409 (413)
T 1xes_A 377 LQNGCS-------TT-G--------E----GLEMGVLFGFGPGLTIETVVLKS 409 (413)
T ss_dssp HHTTCS-------BT-T--------T----TCSEEEEEEEETTTEEEEEEEEE
T ss_pred cccCCC-------CC-C--------C----CcceEEEEEecCCcEEeEEEEEe
Confidence 11111 01 0 0 02688999999999999999873
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-18 Score=168.67 Aligned_cols=244 Identities=16% Similarity=0.080 Sum_probs=162.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
+...|+..|+++||++ +++++ ++ .+++|+..+.. ....++..++..|
T Consensus 50 ~~~~la~~Aa~~aL~~--~~~~~--Id----~li~~t~~~~~-------------------------~~p~~a~~v~~~l 96 (396)
T 1xpm_A 50 DIVSMGANAAKDIITD--EDKKK--IG----MVIVATESAVD-------------------------AAKAAAVQIHNLL 96 (396)
T ss_dssp CHHHHHHHHHHTTCCH--HHHHH--EE----EEEEECSSCSB-------------------------SSSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhc--CCHHH--CC----EEEEEeCCCCC-------------------------CCCCHHHHHHHHh
Confidence 4568999999999987 44444 33 34556433210 0124678999999
Q ss_pred CCC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 156 NIR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 156 gl~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
|++ .+++.+..+|+|++.||..|.++|++|.++.|||+|+|. .. ..++ .+
T Consensus 97 Gl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~-s~--------------------------~~~~-~~ 148 (396)
T 1xpm_A 97 GIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT-AR--------------------------YGLN-SG 148 (396)
T ss_dssp TCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE-EC--------------------------CCTT-CS
T ss_pred CCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh-hc--------------------------cccC-CC
Confidence 997 499999999999999999999999999999999999993 11 0011 14
Q ss_pred CCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEecc-CCCCCCCC--------CHHH--------HHHHHHHHHHHcC
Q psy5222 234 EGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINL-HATASPEP--------NLNN--------EISVMNSVLKQSG 296 (415)
Q Consensus 234 ~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~-~~~~~~~~--------~~~~--------~~~~~~~aL~~Ag 296 (415)
+++++||||+|+||++.+ .+++...+.+... +..+...| ++.. +.++++++|+++|
T Consensus 149 ~~~~~GdGA~A~vl~~~~-------~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~ag 221 (396)
T 1xpm_A 149 GEPTQGAGAVAMVIAHNP-------SILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG 221 (396)
T ss_dssp SGGGCEEEEEEEEEEESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcccccceEEEEeccCC-------ceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcC
Confidence 689999999999998642 3455544433332 32221111 3433 6789999999999
Q ss_pred CCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCce-----eeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCC
Q psy5222 297 LKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKL-----LLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNL 371 (415)
Q Consensus 297 l~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~-----~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~ 371 (415)
++++|||+|..|.++++..|......+.+..+-..+.+ |-......+||+.+||-.+.|..++. ++.+
T Consensus 222 l~~~did~~~~H~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~---~~~l---- 294 (396)
T 1xpm_A 222 KSLADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLE---NRDL---- 294 (396)
T ss_dssp CCGGGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHH---HSCC----
T ss_pred CCHHHCCEEEecCCchHHHHHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHH---cCCC----
Confidence 99999999999999998766554332211000000001 01122366899999988777765543 3322
Q ss_pred CCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 372 NLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 372 ~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+.++++..+||.|-...+++++
T Consensus 295 -------------------~~Gd~ill~s~GsG~~~~~~~~~ 317 (396)
T 1xpm_A 295 -------------------QAGETIGLFSYGSGSVGEFYSAT 317 (396)
T ss_dssp -------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred -------------------CCCCEEEEEEECcchhheEEEEE
Confidence 12467888999977666666654
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=6.8e-16 Score=145.26 Aligned_cols=244 Identities=16% Similarity=0.077 Sum_probs=159.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..|+++||+++|+++++ ++ .+++++..... .....+.+++..+|
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~~~--Id----~li~~t~~~~~-------------------------~~p~~a~~v~~~lG 100 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQASE--ID----FILVATVTPDF-------------------------NMPSVACQVQGAIG 100 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSSCSC-------------------------SSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeCCCCc-------------------------CCCcHHHHHHHHcC
Confidence 6799999999999999999988 77 67887543110 01246789999999
Q ss_pred CC-CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCC
Q psy5222 157 IR-GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEG 235 (415)
Q Consensus 157 l~-Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G 235 (415)
++ .|.+.++.+|+|++.||..|+++|++|.++.+||+|+|.+ +. ...+ ..+...
T Consensus 101 l~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~-s~-----------------------~~~~-~dr~~~ 155 (321)
T 3il6_A 101 ATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETF-SK-----------------------MLDW-TDRSTA 155 (321)
T ss_dssp CTTCEEEEECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECG-GG-----------------------GSCT-TCTTTG
T ss_pred CCCceEEEeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccc-cc-----------------------cCCc-cccccc
Confidence 97 4899999999999999999999999999999999999942 11 0111 112346
Q ss_pred ccccceEEEEEeCChhhHHhcCCeeEEEEEeE-Ee-----ccC--CCCC------------CCCCHHHH----HHHHHHH
Q psy5222 236 FIYGQASAALLIEGNKNIKILNKSYLARLLGG-VI-----NLH--ATAS------------PEPNLNNE----ISVMNSV 291 (415)
Q Consensus 236 ~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~-~~-----~~~--~~~~------------~~~~~~~~----~~~~~~a 291 (415)
+++||||+|+||++.+. + .++...... +. ... +... ...++..+ .+.+.++
T Consensus 156 ~lfGDGA~A~vl~~~~~----~-~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 230 (321)
T 3il6_A 156 VLFGDGAAGVLIEAAET----P-HFLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQN 230 (321)
T ss_dssp GGBCCEEEEEEEEEESS----C-CEEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHH
T ss_pred eeeccccEEEEEEEcCC----C-CEEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHH
Confidence 78999999999997642 1 233222211 10 000 0000 01112221 2333344
Q ss_pred HHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCC
Q psy5222 292 LKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNL 371 (415)
Q Consensus 292 L~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~ 371 (415)
++++ +.++|||++..|-. ...=..++.+.++-..++++. .-..+||+.+|+=.+.|..+ ++++.+.
T Consensus 231 i~~~-l~~~did~~v~Hq~-----~~~i~~~~~~~lgl~~ek~~~--~l~~~GNt~sasi~~~L~~~---~~~g~~~--- 296 (321)
T 3il6_A 231 ILSL-VTDETVDYLLLHQA-----NVRIIDKIARKTKISREKFLT--NMDKYGNTSAASIPILLDEA---VENGTLI--- 296 (321)
T ss_dssp HHTT-CCGGGCSEEEECCS-----CHHHHHHHHHHHTCCGGGBCC--CGGGTCBCGGGHHHHHHHHH---HHTTSSC---
T ss_pred HHHH-cCcccCCEEEEcCC-----CHHHHHHHHHHcCcCHHHhhh--hHhhcccHHHHHHHHHHHHH---HHhCCCC---
Confidence 4433 23889999999943 333455666666654334442 34667999999866655443 3444331
Q ss_pred CCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 372 NLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 372 ~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+ -..+.++..+||.|-+-+++|++
T Consensus 297 ----~--------------G~~d~vll~~fG~G~t~~~~~l~ 320 (321)
T 3il6_A 297 ----L--------------GSQQRVVLTGFGGGLTWGSLLLT 320 (321)
T ss_dssp ----T--------------TSCCEEEEEEEETTTEEEEEEEE
T ss_pred ----C--------------CCCCEEEEEEEehhheeEEEEEE
Confidence 1 00178899999999999999986
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.6e-16 Score=151.94 Aligned_cols=264 Identities=13% Similarity=0.030 Sum_probs=174.1
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchH
Q psy5222 68 LHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQ 147 (415)
Q Consensus 68 ~~~~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (415)
.+.....+....|+..|+++||+++|+++++ ++ .+++++..+ . ....+
T Consensus 93 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~d--Id----~vi~~t~t~-~-------------------------~~p~~ 140 (393)
T 3ov2_A 93 DRQDIVVEEIPRLAKEAAEKAIKEWGRPKSE--IT----HLVFCSISG-I-------------------------DMPGA 140 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGG--CC----EEEEEESSC-C-------------------------CBSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEEeCC-C-------------------------CCCCH
Confidence 3444444567899999999999999999998 77 577775432 1 01256
Q ss_pred HHHHHHHhCCCCc---cccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCC
Q psy5222 148 IGIMSEIFNIRGE---GFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKK 224 (415)
Q Consensus 148 a~~ia~~lgl~Gp---~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 224 (415)
+.+++..||+++. ++.+..+|++++.||..|.++|++|.++.|||+|+|.+.. ..
T Consensus 141 a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~----------~~------------ 198 (393)
T 3ov2_A 141 DYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVL----------SF------------ 198 (393)
T ss_dssp HHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGG----------TC------------
T ss_pred HHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccch----------hc------------
Confidence 7899999999874 6889999999999999999999999999999999994210 00
Q ss_pred cccCCCCC----CCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCC--CC------------C-CCCCH----
Q psy5222 225 TCRPFDKL----AEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHA--TA------------S-PEPNL---- 281 (415)
Q Consensus 225 ~~~pfd~~----~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~--~~------------~-~~~~~---- 281 (415)
..|-|.+ ...+++||||+|+||++.+... .....+ .+...+....+ .. . ..+..
T Consensus 199 -~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~-~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~ 275 (393)
T 3ov2_A 199 -RGPNEGDFEALAGQAGFGDGAGAVVVGADPLEG-IEKPIY-EIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAII 275 (393)
T ss_dssp -CCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTT-TCCCSE-EEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHH
T ss_pred -cCCcccchhhhcccccccCccEEEEEEecCCCc-ccCcee-EEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHH
Confidence 1111211 2467899999999999754321 011112 23222211110 00 0 11221
Q ss_pred -HHHHHHHHHHHHHcCCCC-CcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHHHHHHHHH
Q psy5222 282 -NNEISVMNSVLKQSGLKK-NMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSGIVEIIAS 358 (415)
Q Consensus 282 -~~~~~~~~~aL~~Agl~~-~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg~~~l~~~ 358 (415)
..+.++++++|+++|+++ +|| ++..| .....=..++.+.++-..++++.+ ..-..+||+.+|+=.+.|-.+
T Consensus 276 ~~~~~~~i~~~L~~~gl~~~~di-~~v~H-----q~n~~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~ 349 (393)
T 3ov2_A 276 ADNLGRSLERALAPLGVREWNDV-FWVAH-----PGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDEL 349 (393)
T ss_dssp HTTSHHHHHHHHGGGTCCSGGGS-EEEEC-----CCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccCc-EEEEC-----CCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHH
Confidence 223578999999999997 888 89999 333344566666666443334322 233557999999877776655
Q ss_pred HHH-hhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 359 VIQ-MRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 359 ~~~-l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+.. ++.|.+.+- .+.+.++..+||-|=+..++||+.
T Consensus 350 ~~~~~~~g~~~~G--------------------~~~d~vll~~fG~G~t~~~~ll~~ 386 (393)
T 3ov2_A 350 RKRSAVEGRSTTG--------------------DGLQWGVLLGFGPGLSIETVVLRS 386 (393)
T ss_dssp HHHHHHTTCSBTT--------------------TTCSEEEEEEEETTTEEEEEEEEE
T ss_pred HHhhhhcCCcCCC--------------------CCCCeEEEEEECccceeeeeeeEE
Confidence 443 222433110 012688999999999999999985
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.2e-15 Score=143.72 Aligned_cols=245 Identities=12% Similarity=0.116 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++|+++++ ++ .+++++..+.. .....+.+|+..|
T Consensus 61 ~~~~la~~Aa~~aL~~ag~~~~d--Id----~li~~t~t~~~-------------------------~~P~~a~~v~~~L 109 (350)
T 4ewp_A 61 TVPVMAVGAAREALERAGLQGSD--LD----AVIVSTVTFPH-------------------------ATPSAAALVAHEI 109 (350)
T ss_dssp CHHHHHHHHHHHHHHHTTCCGGG--CS----EEEEECSCCSC-------------------------SSSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeccCCC-------------------------CCCchHHHHHHHh
Confidence 35789999999999999999998 77 57777543211 1125678999999
Q ss_pred CCCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCC
Q psy5222 156 NIRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAE 234 (415)
Q Consensus 156 gl~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~ 234 (415)
|++. +++.+..+|++++.||..|..+|++|..+.+||+++|.+ +. ...|.+ +..
T Consensus 110 Gl~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~---------------s~---------~~d~~~-~~~ 164 (350)
T 4ewp_A 110 GATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERL---------------SD---------VVDPTD-RSI 164 (350)
T ss_dssp TCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG---------------GG---------GCCTTC-TTT
T ss_pred CCCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeec---------------ee---------cccccc-ccc
Confidence 9975 788899999999999999999999999999999999942 10 111222 245
Q ss_pred CccccceEEEEEeCChhhHHhcCCeeEEEEEeEE-e-----------------------ccCCCCC----------CCCC
Q psy5222 235 GFIYGQASAALLIEGNKNIKILNKSYLARLLGGV-I-----------------------NLHATAS----------PEPN 280 (415)
Q Consensus 235 G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~-~-----------------------~~~~~~~----------~~~~ 280 (415)
.+.+||||+|+||++.+.. + +.....+.. . ..+.... ...+
T Consensus 165 ~~lfgDGA~A~vl~~~~~~---~--~~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (350)
T 4ewp_A 165 SFLLGDGAGAVIVAASDEP---G--ISPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQD 239 (350)
T ss_dssp GGGBCEEEEEEEEEEESSC---C--BCCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEEC
T ss_pred ccccccchheeeeecccCC---C--ccceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEeh
Confidence 6889999999999865421 1 111111110 0 0000000 0012
Q ss_pred H--------HHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHH
Q psy5222 281 L--------NNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGI 352 (415)
Q Consensus 281 ~--------~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~ 352 (415)
+ ..+.++++++|+++|++++|||++..|-.+. .=..++.+.++-..+.+. ...-..+||+.+||=.
T Consensus 240 g~~v~~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~~~-----~i~~~~~~~Lgl~~~~~~-~~~l~~~GNtssasi~ 313 (350)
T 4ewp_A 240 GPSVFRWAVWSMAKVAREALDAAGVEPEDLAAFIPHQANM-----RIIDEFAKQLKLPESVVV-ARDIADAGNTSAASIP 313 (350)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCGGGEEEEEECCSCH-----HHHHHHHHHTTCCTTSEE-CCTHHHHCBCGGGHHH
T ss_pred hHHHHHHHHHhhhHHHHHHHHhhcCChhHhceEEecCCCH-----HHHHHHHHHcCcChHhEE-ecccccccchHHHHHH
Confidence 2 2346789999999999999999999994433 334555566654322322 1222456999888765
Q ss_pred HHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 353 VEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 353 ~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+.|.. .++++.+ .+.++++..+||.|=+.+++|++
T Consensus 314 ~~L~~---~~~~g~~-----------------------~~Gd~vll~~fG~G~t~~~~vlr 348 (350)
T 4ewp_A 314 LAMHR---LLEENPE-----------------------LSGGLALQIGFGAGLVYGAQVVR 348 (350)
T ss_dssp HHHHH---HHHHCGG-----------------------GTTSEEEEEEEETTTEEEEEEEE
T ss_pred HHHHH---HHHhCCC-----------------------CCcCEEEEEEEchhhEeEEEEEE
Confidence 55433 3344433 12467888899987777888875
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-15 Score=146.24 Aligned_cols=262 Identities=11% Similarity=0.053 Sum_probs=166.9
Q ss_pred CHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccch
Q psy5222 67 ILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSN 146 (415)
Q Consensus 67 ~~~~~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (415)
..+....++....|+.+|+++||+++|+++++ ++ .+++++..+ . ....
T Consensus 86 ~~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~d--Id----~li~~t~t~-~-------------------------~~p~ 133 (387)
T 3oit_A 86 DARLDIAADAVPELAAEAAKKAIAEWGRPAAD--IT----HLVVTTNSG-A-------------------------HVPG 133 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGG--CC----EEEEEESSC-C-------------------------EESC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeeCC-C-------------------------Cccc
Confidence 34444555578899999999999999999998 77 677775432 1 0125
Q ss_pred HHHHHHHHhCCCCc---cccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCC
Q psy5222 147 QIGIMSEIFNIRGE---GFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPK 223 (415)
Q Consensus 147 ~a~~ia~~lgl~Gp---~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~ 223 (415)
.+.+++..||+++. .+.+..+|++++.||..|.++|++|.++.|||+|+|.+.. .+
T Consensus 134 ~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~-----------~~---------- 192 (387)
T 3oit_A 134 VDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLM-----------YF---------- 192 (387)
T ss_dssp HHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGG-----------TC----------
T ss_pred HHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccch-----------hc----------
Confidence 67899999999873 6889999999999999999999999999999999994210 00
Q ss_pred CcccCCCCC----CCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCC--------------C-CCCC----
Q psy5222 224 KTCRPFDKL----AEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATA--------------S-PEPN---- 280 (415)
Q Consensus 224 ~~~~pfd~~----~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~--------------~-~~~~---- 280 (415)
..|-|.+ ...+++||||+|+||++.+. ........+.+.+....+.. . ....
T Consensus 193 --~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~ 267 (387)
T 3oit_A 193 --TGPDEGCFRTLLVQGLFGDGAAAVIVGADAD---DVERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGL 267 (387)
T ss_dssp --CCCCSSSCHHHHHHHHBCCEEEEEEEESSCC---SSCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHH
T ss_pred --cCccccchHhhhcccccccceEEEEEecCCC---cccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHH
Confidence 1111211 23678999999999987541 11112234444332211100 0 1111
Q ss_pred -HHHHHHHHHHHHHHc----CCCCCccc--EEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHHH
Q psy5222 281 -LNNEISVMNSVLKQS----GLKKNMID--YLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSGI 352 (415)
Q Consensus 281 -~~~~~~~~~~aL~~A----gl~~~dId--~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg~ 352 (415)
...+.++++++|+++ |++ |+| ++..|- ....=..++.+.++-..+++..+ ..-..+||+.+||=.
T Consensus 268 ~~~~~~~~~~~~L~~~~~~~gl~--d~d~~~~v~Hq-----~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip 340 (387)
T 3oit_A 268 IGDNVERCLLDMFGPLLGGDGGG--GWNDLFWAVHP-----GSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVI 340 (387)
T ss_dssp HHHHHHHHHHHHTGGGCC--------GGGSEEEECC-----CCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHH
T ss_pred HHHHHHHHHHHHHHhhcccCCCC--cccccEEEECC-----CCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHH
Confidence 344567888899999 887 566 999993 33344556666666443333322 233457999999866
Q ss_pred HHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 353 VEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 353 ~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+.|-.+ +++.+.+-. . .-+.+.++..+||-|-+..++||++
T Consensus 341 ~~L~~~----~~~~~~~G~----~-------------g~~~d~vll~~fG~G~t~~~~ll~~ 381 (387)
T 3oit_A 341 FALDEL----RRQRKEAAA----A-------------GEWPELGVMMAFGPGMTVDAMLLHA 381 (387)
T ss_dssp HHHHHH----HHC---------------------------CCEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHH----HHhhhccCC----C-------------CCCCCEEEEEEecccceeeeeeeEe
Confidence 665442 222221100 0 0013688999999999999999985
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=3e-15 Score=146.98 Aligned_cols=180 Identities=17% Similarity=0.138 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..|+++||+++|+++++ ++ .+++++..... ....++..++..||
T Consensus 52 ~~~La~~Aa~~aL~~agi~~~~--Id----~li~~t~t~~~-------------------------~~p~~a~~v~~~lg 100 (450)
T 2f82_A 52 VISMSFNAVTSLLEKYKIDPKQ--IG----RLEVGSETVID-------------------------KSKSIKTFLMQLFE 100 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGG--EE----EEEEECCCCSC-------------------------SSSCHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHcCcCHHH--CC----EEEEEecCCCC-------------------------CCCcHHHHHHHHhC
Confidence 5689999999999999988777 55 45556432210 01256788999988
Q ss_pred C---C-CccccccccchhHHHHHHHHHHHHHcCCC--CeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCC
Q psy5222 157 I---R-GEGFIIGGASASGNIGIIHGMRLIQNNIV--DACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFD 230 (415)
Q Consensus 157 l---~-Gp~~~v~~~cas~l~Al~~A~~~I~~G~~--d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd 230 (415)
+ . .+++.+..+|+|++.||..|.++|++|.+ +.|||+|+|.+ + ++
T Consensus 101 l~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~-~----------------------------~~ 151 (450)
T 2f82_A 101 KCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSA-V----------------------------YA 151 (450)
T ss_dssp TTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEE-C----------------------------CS
T ss_pred CcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeec-c----------------------------cc
Confidence 8 3 48899999999999999999999999998 99999999942 1 11
Q ss_pred CCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEecc--CCCCC------CCCCH--------HHHHHHHHHHHH-
Q psy5222 231 KLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINL--HATAS------PEPNL--------NNEISVMNSVLK- 293 (415)
Q Consensus 231 ~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~--~~~~~------~~~~~--------~~~~~~~~~aL~- 293 (415)
.+..+.++||||+|+||++.+. . .+.....|..... +.... +..++ ..+..+++.+|+
T Consensus 152 ~~~~~~~fGDGA~A~ll~~~~~----~-~~~~~~~g~~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~ 226 (450)
T 2f82_A 152 EGPARPTGGAAAIAMLIGPDAP----I-VFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNK 226 (450)
T ss_dssp SSTTGGGCEEEEEEEEEESSCS----E-EEEEEEEEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccccceEEEEeccCCc----e-EEEeccceeehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHH
Confidence 1235778999999999987542 1 1222223433221 00000 11122 235578888886
Q ss_pred -----HcCCCCCcccEEEecCCCCCCCCHHHHH
Q psy5222 294 -----QSGLKKNMIDYLNTHGSSSPLGDKIEIS 321 (415)
Q Consensus 294 -----~Agl~~~dId~v~~h~~gt~~~d~~E~~ 321 (415)
++|++++|||++..|..+++..+.....
T Consensus 227 ~~~~~~agl~~~did~~v~Hq~~~~i~~~~~~~ 259 (450)
T 2f82_A 227 FEKLEGKEFSINDADYFVFHSPYNKLVQKSFAR 259 (450)
T ss_dssp HHHHHSSCCCGGGCSEEEECCSSHHHHHHHHHH
T ss_pred hhhccccCCChhhcCEEEecCChHHHHHHHHHH
Confidence 8999999999999999988766655433
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.2e-14 Score=138.61 Aligned_cols=242 Identities=12% Similarity=0.029 Sum_probs=161.4
Q ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHH
Q psy5222 75 PLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEI 154 (415)
Q Consensus 75 ~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 154 (415)
.....|+.+|+++||+++|+++++ ++ .+++++..+. . ....+.+++..
T Consensus 135 ~~~~~La~~Aa~~AL~~agi~~~d--Id----~li~~t~t~~-------------------------~-~P~~a~~v~~~ 182 (413)
T 3v7i_A 135 EAVQAYGERAARGALQIAGLDVAD--VD----CLITSNSTTP-------------------------A-LPGLDVALANR 182 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGG--CC----EEEEECCSSC-------------------------C-SSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhCcCHHH--CC----EEEEEccCCC-------------------------C-cCHHHHHHHHH
Confidence 456789999999999999999998 77 6888754321 0 12467899999
Q ss_pred hCCCC--ccccc-cccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCC
Q psy5222 155 FNIRG--EGFII-GGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDK 231 (415)
Q Consensus 155 lgl~G--p~~~v-~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~ 231 (415)
+|++. +.+.+ ..+|++++.||..|.++|++|.++.|||+|+|.+.. ..++-|.
T Consensus 183 LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~------------------------~~~~~d~ 238 (413)
T 3v7i_A 183 LPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALST------------------------TYQPADD 238 (413)
T ss_dssp TTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGG------------------------GCCSSCC
T ss_pred hCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccc------------------------ccCcccc
Confidence 99976 34667 999999999999999999999999999999994211 0111111
Q ss_pred CCC----CccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCC--------------C-CCCC----HHHHHHHH
Q psy5222 232 LAE----GFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATA--------------S-PEPN----LNNEISVM 288 (415)
Q Consensus 232 ~~~----G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~--------------~-~~~~----~~~~~~~~ 288 (415)
..+ ..++||||+|+||++.+.. + +..++.+......+.. . .... ...+.+++
T Consensus 239 ~~~~lv~~~LFGDGAaAvvl~~~~~~---~--~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i 313 (413)
T 3v7i_A 239 TLESLIVRLLFADTAVAAVVTGRPRP---E--SVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAM 313 (413)
T ss_dssp STTHHHHHHHBCCEEEEEEEESSCCT---T--EEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHH
T ss_pred chhhhhcceeeccccEEEEEEecCCC---C--CCEEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHH
Confidence 111 5789999999999875431 1 1224444432211100 0 1111 23356788
Q ss_pred HHHHH------HcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHh--cCCCceee-eecccccchhHhhHHHHHHHHHH
Q psy5222 289 NSVLK------QSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYK--NHFSKLLL-NSTKSLTGHCLYSSGIVEIIASV 359 (415)
Q Consensus 289 ~~aL~------~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~--~~~~~~~v-~~~k~~~Gh~~~asg~~~l~~~~ 359 (415)
+++|+ ++|++ ||++..|-.+ ..=..++.+.++ -..+++.. ...-. +||+.+|+=.+.|-.++
T Consensus 314 ~~~L~~~~~~~~~gl~---id~~v~Hq~~-----~~il~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~ 384 (413)
T 3v7i_A 314 WEWLRVRYEDDPSSWH---PDVLLAHPGG-----TRVLEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH 384 (413)
T ss_dssp HHHHHHHTSSSCTTCC---CCEEEEECSS-----HHHHHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH
T ss_pred HHHHhhccccccCCCc---eeEEEECCCC-----hHHHHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHHHHH
Confidence 89999 88887 9999999433 334455666666 33223310 12334 79999998666665544
Q ss_pred HHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 360 IQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 360 ~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+ +.+ .+.+.++..+||-|=+..++||+
T Consensus 385 ---~-~~~-----------------------~~Gd~vll~~fG~Glt~~~~ll~ 411 (413)
T 3v7i_A 385 ---D-AGQ-----------------------KTGSRAVLYAAAPGLTATALEGE 411 (413)
T ss_dssp ---H-HCC-----------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ---h-CCC-----------------------CCCCEEEEEEECHHHhHhhhheE
Confidence 2 222 11367889999998888888886
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.5e-14 Score=139.96 Aligned_cols=261 Identities=11% Similarity=0.087 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||+++|+++++ ++ .+++++..+ . .....+.+++..||
T Consensus 110 a~~La~~Aa~~AL~~agi~~~d--Id----~li~~t~t~-~-------------------------~~P~~a~~v~~~LG 157 (465)
T 3e1h_A 110 GVPLAVEASRKAMAEARLVPAQ--IT----HMVSTTCTD-S-------------------------ANPGYDHYVAKELG 157 (465)
T ss_dssp THHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSSC-C-------------------------CSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeeCC-C-------------------------CCCcHHHHHHHHhC
Confidence 4589999999999999999998 77 577775331 0 01246789999999
Q ss_pred CCC-c-cccc-cccchhHHHHHHHHHHHHHc----CCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCC
Q psy5222 157 IRG-E-GFII-GGASASGNIGIIHGMRLIQN----NIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPF 229 (415)
Q Consensus 157 l~G-p-~~~v-~~~cas~l~Al~~A~~~I~~----G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pf 229 (415)
++. + .+.| ..+|++++.||..|.++|++ |.++.|||+|+|.+...... ....... ..
T Consensus 158 l~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S~~~~~-~~~~~~~---------------~~ 221 (465)
T 3e1h_A 158 LSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRS-ELESIDA---------------LQ 221 (465)
T ss_dssp CCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCGGGHHH-HHHHHHH---------------HT
T ss_pred CCCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecchhcCc-ccccccc---------------cc
Confidence 976 4 5778 79999999999999999997 99999999999953322211 1111000 01
Q ss_pred CCCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC---------------CCCC-----HHHHHHHHH
Q psy5222 230 DKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS---------------PEPN-----LNNEISVMN 289 (415)
Q Consensus 230 d~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~---------------~~~~-----~~~~~~~~~ 289 (415)
+.....+++||||+|+||++.+... ........+.++.....+... ..+. ...+.++++
T Consensus 222 ~d~~t~~LFGDGAaAvVl~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~ 300 (465)
T 3e1h_A 222 ETRIGIALFSDCASAVILSNGIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYA 300 (465)
T ss_dssp CCCCHHHHBCCEEEEEEEECCTTCC-TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHH
T ss_pred cccccccccccceeEEEEEccCCCc-cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHH
Confidence 1223567899999999998754211 001122344444322111100 1111 345567888
Q ss_pred HHHHH-------cCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHHHHHHHHHHHH
Q psy5222 290 SVLKQ-------SGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSGIVEIIASVIQ 361 (415)
Q Consensus 290 ~aL~~-------Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg~~~l~~~~~~ 361 (415)
++|++ +|++++||||+ +| .....=..++.+.++-..+++..+ ..-..+||+.+|+=.+.|-.+
T Consensus 301 ~~L~~~g~~L~~agl~~~DId~~-~H-----qan~rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~--- 371 (465)
T 3e1h_A 301 DLLSSLQDQLPSSYQKPADFDWA-MH-----PGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRL--- 371 (465)
T ss_dssp HHHHHHGGGSCTTSCSGGGSEEE-EC-----CSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHH---
T ss_pred HHHHhccccccccCCCHHHceEE-ec-----CCChHHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHH---
Confidence 88887 67999999988 99 333344556666666432223221 111245999888755444332
Q ss_pred hhc--CccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 362 MRK--KFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 362 l~~--~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+++ +.+.+. .+ +.++++..+||-|=+..++||+.
T Consensus 372 ~~~~~g~l~~G-----------------g~--~~d~vll~gfG~Glt~~~~llr~ 407 (465)
T 3e1h_A 372 REKDMDALAPG-----------------GK--VKEYVVGCAFGPGINVEMCMLKR 407 (465)
T ss_dssp TSTTTTSCSSS-----------------SC--CCSEEEEEEEETTTEEEEEEEEE
T ss_pred HHhcccccCCC-----------------CC--CCCEEEEEEEhHHHhhhheeeEE
Confidence 233 222111 00 13788899999998888888874
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.5e-14 Score=133.92 Aligned_cols=225 Identities=11% Similarity=0.055 Sum_probs=136.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+.+|+++||++||+++++ +| .+++|+... . ...+..++..++
T Consensus 55 ~sdLa~~Aa~~AL~~AGi~~~D--ID----~II~gt~t~-q---------------------------~~~A~~va~~Lg 100 (347)
T 3lma_A 55 ERKLMEDAVQSALSKQNLKKED--ID----IFLAGDLLN-Q---------------------------NVTANYVARHLK 100 (347)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGG--CS----EEEEEESSS-S---------------------------STTHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeCCC-c---------------------------hhHHHHHHHHhC
Confidence 4689999999999999999999 88 577774331 0 013556777775
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCc
Q psy5222 157 IRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGF 236 (415)
Q Consensus 157 l~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~ 236 (415)
+ |.+.|+++|+|++.||..|..+|++|.+|.|||+|+|.+.+... ..... ...+..+|.. -.
T Consensus 101 i--pafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aer--------q~r~p----~e~g~q~p~t----a~ 162 (347)
T 3lma_A 101 I--PFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNATAER--------QFRYP----TEYGGQKPGT----AT 162 (347)
T ss_dssp C--CEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTC--------CC-----------------------
T ss_pred C--CEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhh--------hccCc----chhcccCCch----hc
Confidence 4 89999999999999999999999999999999999995322100 00000 0001112221 12
Q ss_pred cccceEEEEEeCChhhHHhcCCeeEEEEEeEEe--ccCCCCCCCC-C-----HHHHHHHHHHHHHHcCCCCCcccEEEec
Q psy5222 237 IYGQASAALLIEGNKNIKILNKSYLARLLGGVI--NLHATASPEP-N-----LNNEISVMNSVLKQSGLKKNMIDYLNTH 308 (415)
Q Consensus 237 ~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~--~~~~~~~~~~-~-----~~~~~~~~~~aL~~Agl~~~dId~v~~h 308 (415)
..++||+|+||++.+. + + +|.+... ..| ....+| + .+...+.+.+.|+++|++++|+|+|..+
T Consensus 163 ~t~dGAGA~VL~~~g~----~--p--~I~~~t~Gkvvd-~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtg 233 (347)
T 3lma_A 163 STVTGSGAVVLSQQPG----G--I--KITSATVGRVID-LGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTG 233 (347)
T ss_dssp -CCCEEEEEEEESSCC----S--E--EEEEEECCCCBC-CSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEE
T ss_pred EEccceeEEEEEecCC----C--C--ceeeeeeeeeec-cCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecC
Confidence 3468999999996531 2 2 2333221 111 111222 1 2334577899999999999999999976
Q ss_pred CCCCCCCCHHHHHHHHHHHhcCC---Cceeeeecccccchh---------HhhHHHHHHHHHHHHhhcCcc
Q psy5222 309 GSSSPLGDKIEISAIKEVYKNHF---SKLLLNSTKSLTGHC---------LYSSGIVEIIASVIQMRKKFI 367 (415)
Q Consensus 309 ~~gt~~~d~~E~~al~~~~~~~~---~~~~v~~~k~~~Gh~---------~~asg~~~l~~~~~~l~~~~i 367 (415)
+.+. +-..-+.+++.+.+ ++.+..+....++.. -|+|...-.-..+-.|++|.+
T Consensus 234 dL~q-----~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v~~~~~~~~~~~g~~ 299 (347)
T 3lma_A 234 DLSG-----VGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAVVTFAHIFKEIEAGRL 299 (347)
T ss_dssp SCHH-----HHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHHHHHHTHHHHHHTTSC
T ss_pred ChHH-----HHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHHHHHHHHHHHHhcCcc
Confidence 4332 23444666665532 233333333333321 145555555555667776654
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=4.2e-14 Score=135.92 Aligned_cols=239 Identities=15% Similarity=0.139 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++| +++ ++ .+++++..+.. .....+..++..|
T Consensus 55 ~~~~La~~Aa~~aL~~a~--~~~--Id----~li~~t~t~~~-------------------------~~ps~a~~v~~~L 101 (388)
T 3v4n_A 55 DIVTFAANAAEAILTKED--KEA--ID----MVIVGTESSID-------------------------ESKAAAVVLHRLM 101 (388)
T ss_dssp CHHHHHHHHHHTTCCHHH--HHH--EE----EEEEECSSCSB-------------------------SSSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhCC--ccc--CC----EEEEEeccCCC-------------------------cCccHHHHHHHHc
Confidence 356899999999999987 556 55 56777543211 0125678999999
Q ss_pred CCCC--ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 156 NIRG--EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 156 gl~G--p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
|+++ +++.+..+|++++.||..|..+|++|.++.|||+|+|.. + +.++ ..
T Consensus 102 Gl~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~---------------s------------~~~~-~~ 153 (388)
T 3v4n_A 102 GIQPFARSFEIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIA---------------K------------YGLN-SG 153 (388)
T ss_dssp TCCSSCEEEEEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEE---------------C------------CCTT-CT
T ss_pred CCCCCceEeehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhh---------------c------------ccCC-CC
Confidence 9975 788899999999999999999999999999999999941 1 1111 12
Q ss_pred CCccccceEEEEEeCChhhHHhcCCeeEEEEEe-EEeccCCCC--C----CCC--C--------HHHHHHHHHHHHHHcC
Q psy5222 234 EGFIYGQASAALLIEGNKNIKILNKSYLARLLG-GVINLHATA--S----PEP--N--------LNNEISVMNSVLKQSG 296 (415)
Q Consensus 234 ~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g-~~~~~~~~~--~----~~~--~--------~~~~~~~~~~aL~~Ag 296 (415)
+..++||||+|+||++.+ .+...... .+...+... . ..+ + ...+.++++++|+++|
T Consensus 154 ~~~lfGDGA~A~ll~~~~-------~il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g 226 (388)
T 3v4n_A 154 GEPTQGAGAVAMLVSSEP-------RILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTG 226 (388)
T ss_dssp TGGGCEEEEEEEEEEESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCccccceeEEEeecCC-------CceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhC
Confidence 357899999999998743 12211111 111111110 0 001 1 2445788999999999
Q ss_pred CCCCcccEEEecCCCCCCCCHHHH-------HHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhc-CccC
Q psy5222 297 LKKNMIDYLNTHGSSSPLGDKIEI-------SAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRK-KFIH 368 (415)
Q Consensus 297 l~~~dId~v~~h~~gt~~~d~~E~-------~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~-~~ip 368 (415)
++++|||++..|-+..+..-..-. ..+.+.++...++ ....-..+||+.+||=.+.|..++ ++ +.+
T Consensus 227 ~~~~did~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~l~~~~e~--~~~~~~~~GN~~sASi~l~L~~~l---~~~g~~- 300 (388)
T 3v4n_A 227 LDFADYDALAFHIPYTKMGKKALLAKISDQTEAEQERILARYEE--SIIYSRRVGNLYTGSLYLGLISLL---ENATTL- 300 (388)
T ss_dssp CCGGGCSEEEECCSSHHHHHHHHHHHSTTSCHHHHHHHHHHHHH--HTTTGGGTCCCGGGHHHHHHHHHH---HHCSSC-
T ss_pred CCHHHCCEEEeCCCcchHHHHHHHHHHhcccHHHHHHhCCCHHH--HhhHHHhcCchHHHHHHHHHHHHH---HhcCcC-
Confidence 999999999999644321100000 1222222211011 122445679999998766665544 32 222
Q ss_pred CCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEE
Q psy5222 369 PNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSI 410 (415)
Q Consensus 369 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~ 410 (415)
.+.++++..+||.|=+...+
T Consensus 301 ----------------------~~Gd~ill~s~GsG~~ae~~ 320 (388)
T 3v4n_A 301 ----------------------TAGNQIGLFSYGSGAVAEFF 320 (388)
T ss_dssp ----------------------CTTCEEEEEEEETTTEEEEE
T ss_pred ----------------------CCCCEEEEEEecCcceeEEE
Confidence 12467888888877655443
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.7e-12 Score=127.98 Aligned_cols=176 Identities=16% Similarity=0.133 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++|+++++ |+ .+++++..+... ....+..++..|
T Consensus 72 ~~~~La~~Aa~~aL~~agi~~~d--Id----~li~~T~t~~~~-------------------------~ps~a~~v~~~L 120 (478)
T 2p8u_A 72 DINSLCMTVVQNLMERNNLSYDC--IG----RLEVGTETIIDK-------------------------SKSVKTNLMQLF 120 (478)
T ss_dssp CHHHHHHHHHHHHHHHTTCCGGG--EE----EEEEECSCCSCS-------------------------SSCHHHHHGGGT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEccCCccc-------------------------CccHHHHHHHHH
Confidence 35799999999999999998877 65 466664432110 124566777444
Q ss_pred C---CCC-ccccccccchhHHHHHHHHHHHHHcCC--CCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCC
Q psy5222 156 N---IRG-EGFIIGGASASGNIGIIHGMRLIQNNI--VDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPF 229 (415)
Q Consensus 156 g---l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~--~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pf 229 (415)
+ +.. +++.+..+|++++.||..|..+|++|. .+.|||+|+|.. . |
T Consensus 121 ~~lG~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia---------------~--------------~ 171 (478)
T 2p8u_A 121 EESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIA---------------V--------------Y 171 (478)
T ss_dssp TTTTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE---------------C--------------C
T ss_pred hhcCCCCceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeee---------------c--------------c
Confidence 4 444 778899999999999999999999999 999999999930 0 1
Q ss_pred CCCCCCccccceEEEEEeCChhhHHhcCCeeEEE-EEeEEeccCCCCCCC-------C--CH--------HHH---HHHH
Q psy5222 230 DKLAEGFIYGQASAALLIEGNKNIKILNKSYLAR-LLGGVINLHATASPE-------P--NL--------NNE---ISVM 288 (415)
Q Consensus 230 d~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~-i~g~~~~~~~~~~~~-------~--~~--------~~~---~~~~ 288 (415)
.......++||||+|+||++.+. + ++.. +.+..+ .+...... | ++ ..+ .+.+
T Consensus 172 ~~~~~~~~fGdGA~A~Ll~~~~~----~--~l~~~~~gs~~-~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~ 244 (478)
T 2p8u_A 172 ATGNARPTGGVGAVALLIGPNAP----L--IFERGLRGTHM-QHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVY 244 (478)
T ss_dssp CSSTTGGGCEEEEEEEEEESSCS----E--EECTTCCEEEE-CCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCcccceeEEEEEecCCC----c--eEeeccceecc-cchhheeeecCCCcceEEcCcchHHHHHHHHHHHHHHH
Confidence 11223578999999999986431 0 0000 011111 11111111 1 11 111 1345
Q ss_pred HHHHH--------HcCCCCCcccEEEecCCCCCCCCHH
Q psy5222 289 NSVLK--------QSGLKKNMIDYLNTHGSSSPLGDKI 318 (415)
Q Consensus 289 ~~aL~--------~Agl~~~dId~v~~h~~gt~~~d~~ 318 (415)
++.++ ++|++++|||++..|-.+.+..+..
T Consensus 245 ~~~l~~~~~~~~~~~g~~~~did~~v~H~~~~ki~~~~ 282 (478)
T 2p8u_A 245 CKKIHAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKS 282 (478)
T ss_dssp HHHHHHHHHHHTCCCCCCGGGCSEEEECCSSHHHHHHH
T ss_pred HHHHhhhccccccccCCChHHcCEEEecCCcHHHHHHH
Confidence 66666 6799999999999997776654443
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.6e-10 Score=112.29 Aligned_cols=118 Identities=14% Similarity=0.132 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|++.|+++||+++|+++++ ++ -+++++..+.. .. ...+..+...|
T Consensus 53 ~~~~ma~~Aa~~al~~a~i~~~~--Id----~ii~aT~t~~~----------------~~---------ps~a~~v~~~l 101 (460)
T 2wya_A 53 DINSLCLTVVQRLMERIQLPWDS--VG----RLEVGTETIID----------------KS---------KAVKTVLMELF 101 (460)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGG--EE----EEEEECSCCSC----------------SS---------SCHHHHHGGGT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeCCCCC----------------CC---------CchHHHHHHHH
Confidence 35689999999999999988877 65 46677543211 01 14567888888
Q ss_pred CCCC----ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCC
Q psy5222 156 NIRG----EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDK 231 (415)
Q Consensus 156 gl~G----p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~ 231 (415)
|+.| +++-+..+|++++.||..|..+|++|..+.++++.+.+. ++ + |..
T Consensus 102 ~~~g~~~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~--------------~~------------~-~~d 154 (460)
T 2wya_A 102 QDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGD--------------IA------------V-YPS 154 (460)
T ss_dssp GGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEE--------------EE------------C-CCS
T ss_pred hccCCCCeeEechhhhhhhHHHHHHHHHHHHHhccccceEEEEEecc--------------cc------------c-ccc
Confidence 7654 456789999999999999999999998765444433310 11 1 122
Q ss_pred CCCCccccceEEEEEeCChh
Q psy5222 232 LAEGFIYGQASAALLIEGNK 251 (415)
Q Consensus 232 ~~~G~~~geGa~alvL~~~~ 251 (415)
......+|+||++++++..+
T Consensus 155 ~~~~~~~GdGA~A~l~~~~~ 174 (460)
T 2wya_A 155 GNARPTGGAGAVAMLIGPKA 174 (460)
T ss_dssp STTGGGCEEEEEEEEEESSC
T ss_pred ccccccCcchHHhhhcccCC
Confidence 33456789999999998654
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=82.16 E-value=4.5 Score=38.18 Aligned_cols=98 Identities=11% Similarity=0.020 Sum_probs=56.5
Q ss_pred EEEEeEEeccCCCCC----CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCC-CHHHHHHHHHHHhcCCCceee
Q psy5222 262 ARLLGGVINLHATAS----PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLG-DKIEISAIKEVYKNHFSKLLL 336 (415)
Q Consensus 262 a~i~g~~~~~~~~~~----~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~-d~~E~~al~~~~~~~~~~~~v 336 (415)
+.|.|.+.+--+... ..+..+-..+++++||+++|++++|||.+.+- +.++.. ...-..-+...++-.. ..|.
T Consensus 7 v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g-~~~~~~~~~~~a~~~~~~lGl~~-~~p~ 84 (395)
T 4e1l_A 7 VVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIG-NVLQTGLGQNVARQIAINAGIPN-SVPS 84 (395)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEE-CCCCSSTTCCHHHHHHHHTTCCT-TSCE
T ss_pred EEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCcchHHHHHHHHcCCCC-CceE
Confidence 457777655433322 11223445789999999999999999987653 222211 1112223333334210 1222
Q ss_pred eecccccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 337 NSTKSLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 337 ~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
. .=+..++|++..+..+...++.|.
T Consensus 85 ~-----~v~~~Css~~~al~~A~~~I~~G~ 109 (395)
T 4e1l_A 85 Y-----TVNKLCGSGLKSVQLAAQSITSGE 109 (395)
T ss_dssp E-----EECCGGGHHHHHHHHHHHHHHTTS
T ss_pred E-----EccccchHHHHHHHHHHHHHhCCC
Confidence 1 124567888888988999988775
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=81.93 E-value=5.3 Score=37.59 Aligned_cols=98 Identities=8% Similarity=-0.030 Sum_probs=56.0
Q ss_pred EEEEeEEeccCCCCC-----CCCCHHHHHHHHHHHHHHc-CCCCCcccEEEecCCCCCCC--CHHHHHHHHHHHhcCCCc
Q psy5222 262 ARLLGGVINLHATAS-----PEPNLNNEISVMNSVLKQS-GLKKNMIDYLNTHGSSSPLG--DKIEISAIKEVYKNHFSK 333 (415)
Q Consensus 262 a~i~g~~~~~~~~~~-----~~~~~~~~~~~~~~aL~~A-gl~~~dId~v~~h~~gt~~~--d~~E~~al~~~~~~~~~~ 333 (415)
+.|.|.+.+--+... ..+..+-..++++++|+++ |++++|||.+.+- +.++.. ...-..-+...++-.. .
T Consensus 4 v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g-~~~~~~~~~~~~a~~~~~~~Gl~~-~ 81 (387)
T 3goa_A 4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWG-CVQQTLEQGFNIARNAALLAEIPH-S 81 (387)
T ss_dssp EEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEE-CSCCSBTTTTTHHHHHHHHTTCCT-T
T ss_pred EEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEE-cccCCcccccHHHHHHHHHcCCCC-C
Confidence 356666654333221 2223445578999999999 9999999986653 222211 1112222233333210 1
Q ss_pred eeeeecccccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 334 LLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 334 ~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
.|. ..=...++|++..+..+..+++.|.
T Consensus 82 ~p~-----~~v~~aCss~l~Al~~A~~~I~sG~ 109 (387)
T 3goa_A 82 VPA-----VTVNRLCGSSMQALHDAARMIMTGD 109 (387)
T ss_dssp SCC-----EEEECGGGHHHHHHHHHHHHHHTTS
T ss_pred CcE-----eEecCcchHHHHHHHHHHHHHhCCC
Confidence 221 1224567888899999999998775
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=81.13 E-value=4.1 Score=37.32 Aligned_cols=78 Identities=4% Similarity=0.001 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCC-CCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHH
Q psy5222 281 LNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPL-GDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASV 359 (415)
Q Consensus 281 ~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~-~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~ 359 (415)
.+-..++++++|+++|++++|||.+... +.++. ....-...+...++-. ..+.... ...+++|+..+..+.
T Consensus 59 ~~La~~Aa~~aL~~ag~~~~~Id~vi~~-t~~~~~~~p~~a~~v~~~lGl~--~~~~~~v-----~~~C~s~~~al~~A~ 130 (323)
T 3il3_A 59 ATMGFEAAKNAIEAAQINPQDIELIIVA-TTSHSHAYPSAACQVQGLLNID--DAISFDL-----AAACTGFVYALSVAD 130 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCGGGCCEEEEE-CSCCSCSSSCHHHHHHHHTTCS--SCEEEEE-----CCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCCCCccHHHHHHHHhCCC--CccEEEE-----CCccHHHHHHHHHHH
Confidence 3445789999999999999999987653 33332 1122233344445532 2333222 234666777777777
Q ss_pred HHhhcCc
Q psy5222 360 IQMRKKF 366 (415)
Q Consensus 360 ~~l~~~~ 366 (415)
..++.+.
T Consensus 131 ~~i~~g~ 137 (323)
T 3il3_A 131 QFIRAGK 137 (323)
T ss_dssp HHHHTTS
T ss_pred HHHHCCC
Confidence 7877663
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=80.54 E-value=5.2 Score=37.76 Aligned_cols=98 Identities=7% Similarity=-0.036 Sum_probs=56.2
Q ss_pred EEEEeEEeccCCCCC----CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCC-CCHHHHHHHHHHHhcCCCceee
Q psy5222 262 ARLLGGVINLHATAS----PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPL-GDKIEISAIKEVYKNHFSKLLL 336 (415)
Q Consensus 262 a~i~g~~~~~~~~~~----~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~-~d~~E~~al~~~~~~~~~~~~v 336 (415)
+.|.|.+.+.-+... .....+-..+++++||+++|++++|||.+.+- +.++. ....-..-+...++-.. ..|.
T Consensus 9 v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g-~~~~~~~~~~~a~~v~~~lGl~~-~~p~ 86 (396)
T 4dd5_A 9 VVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLG-GVLTAGLGQNIARQIALGAGIPV-EKPA 86 (396)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEE-CSCCTTSCSCHHHHHHHHTTCCT-TSCE
T ss_pred EEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eecCCCCCchHHHHHHHHcCCCC-CceE
Confidence 457777655433221 11223445789999999999999999987653 22221 11122233333344320 1222
Q ss_pred eecccccchhHhhHHHHHHHHHHHHhhcCc
Q psy5222 337 NSTKSLTGHCLYSSGIVEIIASVIQMRKKF 366 (415)
Q Consensus 337 ~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ 366 (415)
... +..+++++..+..+...++.|.
T Consensus 87 ~~v-----~~aCss~~~al~~A~~~I~~G~ 111 (396)
T 4dd5_A 87 MTI-----NIVCGSGLRSVSMASQLIALGD 111 (396)
T ss_dssp EEE-----CCGGGHHHHHHHHHHHHHHHTS
T ss_pred EEe-----ccccHHHHHHHHHHHHHHhcCC
Confidence 211 3457788888888888888764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 415 | ||||
| d1j3na1 | 249 | c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II { | 6e-32 | |
| d2gfva1 | 250 | c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II { | 2e-25 | |
| d1tqya2 | 205 | c.95.1.1 (A:219-423) Actinorhodin polyketide putat | 2e-23 | |
| d2ix4a1 | 270 | c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II | 1e-22 | |
| d1e5ma1 | 250 | c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II { | 7e-22 | |
| d1ox0a1 | 256 | c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II | 4e-21 | |
| d1tqyb2 | 194 | c.95.1.1 (B:210-403) Actinorhodin polyketide putat | 8e-21 | |
| d2gfva2 | 161 | c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II | 3e-20 | |
| d2ix4a2 | 161 | c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II | 3e-20 | |
| d1e5ma2 | 161 | c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II | 7e-20 | |
| d2vbaa1 | 253 | c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E | 8e-20 | |
| d1j3na2 | 159 | c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II | 1e-19 | |
| d2vbaa2 | 151 | c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I | 8e-17 | |
| d1ox0a2 | 158 | c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II | 9e-16 | |
| d1tqya1 | 216 | c.95.1.1 (A:3-218) Actinorhodin polyketide putativ | 7e-12 | |
| d1tqyb1 | 208 | c.95.1.1 (B:2-209) Actinorhodin polyketide putativ | 3e-07 |
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 119 bits (299), Expect = 6e-32
Identities = 50/253 (19%), Positives = 103/253 (40%), Gaps = 27/253 (10%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGI----DYEINNTQSNFSKNIIAKINNFNFKNSLNKI 56
+G ++ IG +F + + GKSG+ ++ + + + + + L ++
Sbjct: 9 LGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVDVDPGAYLDRKELRRL 68
Query: 57 TDLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLII-AGHNT 115
F+Q ++IAA A ++ L + PER+G ++ G
Sbjct: 69 DR------------------FVQYALIAAQLALEDAGLKPEDLD--PERVGTLVGTGIGG 108
Query: 116 TQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGI 175
+ ++ + P +SP + + + ++ + G + A A+G +
Sbjct: 109 METWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADAL 168
Query: 176 IHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEG 235
+R+IQ D L ++PM I AF + A+ +N P+K RPF +G
Sbjct: 169 GSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRN--EEPEKASRPFTLSRDG 226
Query: 236 FIYGQASAALLIE 248
F+ G+ + L++E
Sbjct: 227 FVMGEGAGVLVLE 239
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 101 bits (252), Expect = 2e-25
Identities = 55/253 (21%), Positives = 99/253 (39%), Gaps = 26/253 (10%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGI----DYEINNTQSNFSKNIIAKINNFNFKNSLNKI 56
+G++S +G + S +L+ G+SGI ++ + + F+ + +
Sbjct: 9 LGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRK 68
Query: 57 TDLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTT 116
D FIQ I+A +QA +S L + RIG I
Sbjct: 69 MDA-----------------FIQYGIVAGVQAMQDSGLEITEEN--ATRIGAAIGSGIGG 109
Query: 117 QNYQYSLYPEFL-KKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGI 175
+ + P +SP + + + G ++ ++ +RG I A SG I
Sbjct: 110 LGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGVHNI 169
Query: 176 IHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEG 235
H R+I D + A +P+ + F A A+ +N P+ RP+DK +G
Sbjct: 170 GHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDN--PQAASRPWDKERDG 227
Query: 236 FIYGQASAALLIE 248
F+ G + L++E
Sbjct: 228 FVLGDGAGMLVLE 240
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 94.9 bits (235), Expect = 2e-23
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 3/194 (1%)
Query: 222 PKKTCRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLG--GVINLHATASPEP 279
P+ RPFD +GF+ + +A ++E + A + G N + +
Sbjct: 3 PEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKA 62
Query: 280 NLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNST 339
+ + L +S IDY+N HGS + D+ E +A K H + ++S
Sbjct: 63 DGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSI 122
Query: 340 KSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDN-QANFSGKKSISININNVMS 398
KS+ GH L + G +EI A V+ + + P NL + ++ ++ + +V++
Sbjct: 123 KSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARERKLRSVLT 182
Query: 399 NSFGFSGINSSIIL 412
GF G S+++L
Sbjct: 183 VGSGFGGFQSAMVL 196
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 94.3 bits (233), Expect = 1e-22
Identities = 48/252 (19%), Positives = 100/252 (39%), Gaps = 5/252 (1%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNS----LNKI 56
+G+V+ +G + + LI G+ GI + S + K+ F+ +S
Sbjct: 8 LGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPY 67
Query: 57 TDLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTT 116
+ E + ++ FI ++ AA +A +++ + + I G +
Sbjct: 68 GSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSI 127
Query: 117 QNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGII 176
+ + K+ LSP + + + + G +S + +G A A+G I
Sbjct: 128 CDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIG 187
Query: 177 HGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGF 236
R+IQ D + + + + + F A+ K + P++ RPFD +GF
Sbjct: 188 DATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSS-PQEASRPFDCDRDGF 246
Query: 237 IYGQASAALLIE 248
+ G+ S +++E
Sbjct: 247 VIGEGSGVIVLE 258
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 91.9 bits (227), Expect = 7e-22
Identities = 51/253 (20%), Positives = 98/253 (38%), Gaps = 26/253 (10%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGI----DYEINNTQSNFSKNIIAKINNFNFKNSLNKI 56
+G ++ IG + + L++G++GI ++ ++ F + K
Sbjct: 9 LGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKR 68
Query: 57 TDLSEKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLII-AGHNT 115
D F ++ A+ QA ++KL ++ + IG++I G
Sbjct: 69 MDR-----------------FCHFAVCASQQAINDAKLVI--NELNADEIGVLIGTGIGG 109
Query: 116 TQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGI 175
+ + K P SP + + G+ + +G A A+G+ I
Sbjct: 110 LKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAI 169
Query: 176 IHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEG 235
RL+QN A + ++P+ F + A+ +N + P RPFDK +G
Sbjct: 170 GDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRN--DDPLHASRPFDKDRDG 227
Query: 236 FIYGQASAALLIE 248
F+ G+ S L++E
Sbjct: 228 FVMGEGSGILILE 240
|
| >d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 90.0 bits (222), Expect = 4e-21
Identities = 56/249 (22%), Positives = 95/249 (38%), Gaps = 19/249 (7%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
G+ S IG F NSL GK GI I K ++ +F
Sbjct: 16 YGVTSPIGNTPEEFWNSLATGKIGIGG-------------ITKFDHSDFDVHNAAEIQDF 62
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLII-AGHNTTQNY 119
K F+ + + ++ AA +A ++ L + +R G+I+ +G +
Sbjct: 63 PFDKYFVKKDTNRFDNYSLYALYAAQEAVNHANL--DVEALNRDRFGVIVASGIGGIKEI 120
Query: 120 QYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIHGM 179
+ + K P+ + P + + + G ++ F G I A +S N I
Sbjct: 121 EDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAF 180
Query: 180 RLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239
R I+ D L+ ++P I F A+ A+ P + PFDK GF+ G
Sbjct: 181 RSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTED---PTRASIPFDKDRNGFVMG 237
Query: 240 QASAALLIE 248
+ S L++E
Sbjct: 238 EGSGMLVLE 246
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 87.7 bits (216), Expect = 8e-21
Identities = 37/192 (19%), Positives = 72/192 (37%), Gaps = 3/192 (1%)
Query: 222 PKKTCRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATASPEPNL 281
P + PFD+ A G++ G+ A L++E + + + L G + A
Sbjct: 2 PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRP 61
Query: 282 NNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKS 341
+ L +G +D + G+ P D E AI V+ + K+
Sbjct: 62 AGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREGVP--VTVPKT 119
Query: 342 LTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDN-QANFSGKKSISININNVMSNS 400
TG G ++++ +++ +R+ I P + S + + S + +
Sbjct: 120 TTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLGEPRSTAPRTALVLA 179
Query: 401 FGFSGINSSIIL 412
G G NS+ +L
Sbjct: 180 RGRWGFNSAAVL 191
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 85.2 bits (210), Expect = 3e-20
Identities = 52/157 (33%), Positives = 87/157 (55%), Gaps = 6/157 (3%)
Query: 261 LARLLGGVIN---LHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317
A L+G ++ H T+ P N M + L+ +G++ + I Y+N HG+S+P GDK
Sbjct: 3 YAELVGFGMSSDAYHMTS-PPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDK 61
Query: 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPI 377
E A+K ++ S++L++STKS+TGH L ++G VE I S++ +R + + P +NL++P
Sbjct: 62 AEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPD 121
Query: 378 DNQANFSGKKSI--SININNVMSNSFGFSGINSSIIL 412
+ + + NSFGF G N S+I
Sbjct: 122 EGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 158
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 84.8 bits (209), Expect = 3e-20
Identities = 56/158 (35%), Positives = 82/158 (51%), Gaps = 8/158 (5%)
Query: 262 ARLLGGVINL---HATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKI 318
A L G ++ H T P + + M L+QSGL N IDY+N H +S+P+GD +
Sbjct: 2 AELCGYGMSGDAHHITQ-PPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAV 60
Query: 319 EISAIKEVYKNH--FSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLE-- 374
E AIK V+ H L +STK TGH L ++G VE I S++ + LN++
Sbjct: 61 EARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNP 120
Query: 375 SPIDNQANFSGKKSISININNVMSNSFGFSGINSSIIL 412
PI ++ S + + MSNSFGF G N+S++
Sbjct: 121 DPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLF 158
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 84.0 bits (207), Expect = 7e-20
Identities = 53/156 (33%), Positives = 86/156 (55%), Gaps = 5/156 (3%)
Query: 261 LARLLGGVINL---HATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317
++G + H TA P P+ + LK SGLK M+ Y+N HG+S+P D
Sbjct: 3 YGEMVGYAMTCDAYHITA-PVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDV 61
Query: 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPI 377
E AIK+ NH + ++STKS+TGH L SG +E +A+V+ + + + P +NLE+P
Sbjct: 62 TETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPD 121
Query: 378 DN-QANFSGKKSISININNVMSNSFGFSGINSSIIL 412
++ +S ++ ++ +SNSFGF G N ++
Sbjct: 122 PECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAF 157
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 86.2 bits (212), Expect = 8e-20
Identities = 41/250 (16%), Positives = 86/250 (34%), Gaps = 19/250 (7%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+GIVSSIG + SL +G+SGI + S ++ +
Sbjct: 9 LGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGL--------- 59
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAG--HNTTQN 118
+ + + ++ QA ++ L + Y+ R+GLI +
Sbjct: 60 -----IDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQN-NPRVGLIAGSGGGSPRFQ 113
Query: 119 YQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIHG 178
+ + + + P + M S ++ F I G + I A A+ I +
Sbjct: 114 VFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNA 173
Query: 179 MRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIY 238
+ Q + ++ + + E+ + + P+K R +D +GF+
Sbjct: 174 VE--QIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVI 231
Query: 239 GQASAALLIE 248
+++E
Sbjct: 232 AGGGGMVVVE 241
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 82.9 bits (204), Expect = 1e-19
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 4/157 (2%)
Query: 261 LARLLGGVINL---HATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317
A L+G + H T P P M LK +G+ + Y+N HG+S+P+GD+
Sbjct: 3 YAELVGFGRSADAHHITE-PHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDR 61
Query: 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPI 377
E+ AIK V+ +H +L+++STKS+ GH L ++G VE IA+V + I P +NLE P
Sbjct: 62 AEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPD 121
Query: 378 DNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414
+ ++ +SNSF F G N+ + +
Sbjct: 122 PELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 158
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 74.8 bits (183), Expect = 8e-17
Identities = 42/114 (36%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Query: 300 NMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASV 359
IDYLN+HG+S+P+GD E++AI+EV+ + +++TK++TGH L ++G+ E I S+
Sbjct: 37 TPIDYLNSHGTSTPVGDVKELAAIREVFGDK--SPAISATKAMTGHSLGAAGVQEAIYSL 94
Query: 360 IQMRKKFIHPNLNLESPIDNQANFSG-KKSISININNVMSNSFGFSGINSSIIL 412
+ + FI P++N+E + A + ++ + VMSNSFGF G N+++++
Sbjct: 95 LMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVM 148
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 72.1 bits (176), Expect = 9e-16
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 261 LARLLGGVIN---LHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDK 317
LA ++G H T+ P P I + L+++ + + Y+N HG+S+P +K
Sbjct: 3 LAEVVGYGNTCDAYHMTS-PHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEK 61
Query: 318 IEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPI 377
E AI V + ++STKS TGH L ++G VE I ++ MR F+
Sbjct: 62 GESGAIVAVLGKE---VPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVS 118
Query: 378 DN-QANFSGKKSISININNVMSNSFGFSGINSSIILCK 414
D +AN + + I +SN+FGF G N+ + +
Sbjct: 119 DYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKR 156
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 62.4 bits (150), Expect = 7e-12
Identities = 34/222 (15%), Positives = 71/222 (31%), Gaps = 18/222 (8%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+G+ + G F L G++ I+ + +++ + D
Sbjct: 8 VGVRAPGGNGTRQFWELLTSGRTATRR-------------ISFFDPSPYRSQVAAEADFD 54
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQ 120
+ F + Q ++ A +A+ S L + L A T +
Sbjct: 55 PVAEGFGPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLER 114
Query: 121 YSL-----YPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGI 175
L ++ +LS + S ++ G ++ SG +
Sbjct: 115 EYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSV 174
Query: 176 IHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKN 217
+ +R I+ D +A T ++P+ + F AI A +N
Sbjct: 175 GNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARN 216
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 48.5 bits (114), Expect = 3e-07
Identities = 26/213 (12%), Positives = 65/213 (30%), Gaps = 15/213 (7%)
Query: 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLS 60
+G+V+ G +A + ++++ G+ G+ S + + +I++F+ + + L
Sbjct: 7 VGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPG--RLL 64
Query: 61 EKKKEFILHIAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQ 120
+ + +Q +
Sbjct: 65 PQTDPSTRLALTAADWALQDAKADPESLTDYDMGVV------------TANACGGFDFTH 112
Query: 121 YSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRGEGFIIGGASASGNIGIIHGMR 180
+ + P+ +S + + + G +S +RG + A G + H R
Sbjct: 113 REFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARR 172
Query: 181 LIQNNIVDACLIISAMTDLSPMEIQAFHAIGAM 213
I+ + + L P + A G +
Sbjct: 173 TIRRG-TPLVVSGGVDSALDPWGWVSQIASGRI 204
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 415 | |||
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 99.54 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.3 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.29 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.28 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.28 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.27 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 99.27 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.24 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.19 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.18 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.17 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.14 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 99.06 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.0 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 98.96 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 98.66 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 97.57 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 97.18 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 97.14 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 96.52 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 96.23 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 94.84 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 94.46 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 92.83 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 87.37 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 85.83 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 85.22 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 84.83 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 84.67 |
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=6.4e-47 Score=327.49 Aligned_cols=191 Identities=19% Similarity=0.288 Sum_probs=177.0
Q ss_pred CCCCcccCCCCCCCCccccceEEEEEeCChhhHHhcCC-eeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCC
Q psy5222 221 FPKKTCRPFDKLAEGFIYGQASAALLIEGNKNIKILNK-SYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKK 299 (415)
Q Consensus 221 ~~~~~~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~-~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~ 299 (415)
+|++.|||||.+++|+++|||++++|||+.++|++||+ +||++|.|++.++++.+. .+...+++++|+++|+++++++
T Consensus 1 ~p~~~~rPFD~~a~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~-~~~~~g~~~~i~~aL~~a~i~~ 79 (194)
T d1tqyb2 1 DPDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPG-SGRPAGLERAIRLALNDAGTGP 79 (194)
T ss_dssp CGGGSCCTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTT-CCCCCSHHHHHHHHHHHHTCCG
T ss_pred CCCCCcCcccCCCCCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeeccccccccccc-ccchhhhhhhhhhhcccccccc
Confidence 47889999999999999999999999999999999997 699999999999998664 2333457889999999999999
Q ss_pred CcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCC
Q psy5222 300 NMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDN 379 (415)
Q Consensus 300 ~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~ 379 (415)
+||+||++|||||+.+|.+|..+|.++|+.. .++|++.|+++||+++|||++++++++++|++++|||++|++++ ++
T Consensus 80 ~di~~v~ahgtGt~~~D~~E~~al~~~f~~~--~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~-~~ 156 (194)
T d1tqyb2 80 EDVDVVFADGAGVPELDAAEARAIGRVFGRE--GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSV-PR 156 (194)
T ss_dssp GGCCEEECCCCCSHHHHHHHHHHHHHHHCTT--CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCC-CG
T ss_pred cceeeeeccccCcccccHHHhhhhhhhhhcc--ccccccccccccccccccccceehhhhhhhhhceeccccCCCCC-Cc
Confidence 9999999999999999999999999999765 58999999999999999999999999999999999999999999 88
Q ss_pred CCC--cccCcccccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 380 QAN--FSGKKSISININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 380 ~~~--~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
+++ +++.++++++.+++++|+|||||+|+|+||+||
T Consensus 157 ~~~~~~v~~~~~~~~~~~a~v~s~GfgG~na~~vl~~~ 194 (194)
T d1tqyb2 157 EYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRRF 194 (194)
T ss_dssp GGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ccCccccCCCCccCCCCEEEEECcCCCceeEEEEEeeC
Confidence 766 677778888899999999999999999999998
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=3.8e-47 Score=332.41 Aligned_cols=194 Identities=24% Similarity=0.399 Sum_probs=184.6
Q ss_pred CCCCCcccCCCCCCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCC
Q psy5222 220 NFPKKTCRPFDKLAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGL 297 (415)
Q Consensus 220 ~~~~~~~~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl 297 (415)
++|++.|||||.+++|+++|||++++|||+.++|+++|++||++|.|++.++++.+. ..|+...+.++++++|+++++
T Consensus 1 ~~P~~~~rpFD~~adG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i 80 (205)
T d1tqya2 1 DDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRT 80 (205)
T ss_dssp SCGGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCccCCCCCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcC
Confidence 358999999999999999999999999999999999999999999999999999887 678889999999999999999
Q ss_pred CCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCC
Q psy5222 298 KKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPI 377 (415)
Q Consensus 298 ~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~ 377 (415)
+++||+||++|||||+.+|.+|..++.++|+....+++|++.|+++||+++|||++++++++++|++++|||+.|++++
T Consensus 81 ~~~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~- 159 (205)
T d1tqya2 81 DATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTS- 159 (205)
T ss_dssp CGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSB-
T ss_pred CccceeeeeccccccccCchhHHHHHHHhhccccCCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCCCC-
Confidence 9999999999999999999999999999998766679999999999999999999999999999999999999999999
Q ss_pred CCCCC--cccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 378 DNQAN--FSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 378 ~~~~~--~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+|+++ +++.+..+++.+++++|+|||||+|+|+||++
T Consensus 160 ~p~~~~~~v~~~~~~~~~~~a~~~s~GfGG~na~~vl~~ 198 (205)
T d1tqya2 160 DPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRD 198 (205)
T ss_dssp BTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCcccCCCCCcCCCCCEEEEeCCCCCceeEEEEEee
Confidence 88876 78888888899999999999999999999986
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.9e-45 Score=333.87 Aligned_cols=241 Identities=24% Similarity=0.315 Sum_probs=217.0
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.++++||++|++|+++|++++.++.. .++.++++ .+++|+... .+++++.++++|+++|
T Consensus 9 ~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~~~~~----~~~~~~~~--------~v~~~~~~~-~~~~~~~~~~d~~~~~ 75 (250)
T d2gfva1 9 LGMLSPVGNTVESTWKALLAGQSGISLIDHFDTS----AYATKFAG--------LVKDFNCED-IISRKEQRKMDAFIQY 75 (250)
T ss_dssp EEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCT----TCSCCEEE--------CCTTCCCTT-TSCHHHHTTSCHHHHH
T ss_pred CeeECCCcCCHHHHHHHHHcCCCeeecCCccccc----ccCCccce--------ecccchhhh-hhhhHHHhhcCHHHHH
Confidence 7999999999999999999999999999877666 66777777 777887776 7899999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhh-hhhhhcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSL-YPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
++.++.+||+|||+..++ .++.++||++|+..+.....+.. ..........++|..++++++|.++++|++.||++|
T Consensus 76 ~l~aa~~Al~dAg~~~~~--~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G 153 (250)
T d2gfva1 76 GIVAGVQAMQDSGLEITE--ENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRG 153 (250)
T ss_dssp HHHHHHHHHHHHTCCCCT--TTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHhcCCCccc--cCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCCCC
Confidence 999999999999999988 88999999999665555444343 444446777889999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++|+++|+||+.||.+|+++|++|++|+|||||+|..+++..+..|..++.++..+. .|++.|||||.+++|+++|
T Consensus 154 p~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~--~p~~~~rPFD~~rdG~v~g 231 (250)
T d2gfva1 154 PSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRND--NPQAASRPWDKERDGFVLG 231 (250)
T ss_dssp CEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTT--CHHHHCCTTBTTCCSBCBB
T ss_pred CccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCC--CCCCccCCCCCCCCCEeee
Confidence 99999999999999999999999999999999999998899999999999999997642 3677899999999999999
Q ss_pred ceEEEEEeCChhhHHhcCC
Q psy5222 240 QASAALLIEGNKNIKILNK 258 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~ 258 (415)
||++++|||++++|++||+
T Consensus 232 EGaa~lVLE~~~~A~~rGA 250 (250)
T d2gfva1 232 DGAGMLVLEEYEHAKKRGA 250 (250)
T ss_dssp CEEEEEEEEEHHHHHHHTC
T ss_pred eEEEEEEECcHHHHHHCcC
Confidence 9999999999999999985
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.9e-44 Score=326.80 Aligned_cols=240 Identities=22% Similarity=0.327 Sum_probs=211.9
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+|+|+|.|+++||++|.+|++++++++.++.. .++..+.+ .+ ++++.. .+++++.+.+|+++++
T Consensus 9 ~G~vsp~g~~~~e~w~~l~~G~s~i~~~~~~~~~----~~~~~~~~--------~~-~~~~~~-~~~~~~~~~~d~~~~~ 74 (249)
T d1j3na1 9 LGALTPIGVGQEAFHKAQLAGKSGVRPITRFDAS----ALPVRIAA--------EV-DVDPGA-YLDRKELRRLDRFVQY 74 (249)
T ss_dssp EEEEETTEESHHHHHHHHHHTCCCEEECCSSCCT----TSSCCEEE--------CC-CCCGGG-TSCHHHHTTSCHHHHH
T ss_pred CEeECCCcCCHHHHHHHHHcCCCccccCCccccc----cCCccccc--------cc-cccccc-cccHHHHhhCCHHHHH
Confidence 6999999999999999999999999999877655 45555555 32 445555 6789999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhH-HHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNY-QYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
++.++.+||+|||+++++ +++.++||++|+..+.... ...+......+...++|..++..+.|.++++|++.||++|
T Consensus 75 ~l~aa~~Al~dAGl~~~~--~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl~G 152 (249)
T d1j3na1 75 ALIAAQLALEDAGLKPED--LDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTG 152 (249)
T ss_dssp HHHHHHHHHHHHTCCGGG--SCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHcCCChhH--cCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcCCCC
Confidence 999999999999999998 8899999999965555443 4334444457778899999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++|+++|+|++.||.+|+++|++|++|+|||||+|..+.+..+..|...+.++..+. .|++.|||||.+++|+++|
T Consensus 153 p~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~--~p~~~~rPFd~~~dG~v~g 230 (249)
T d1j3na1 153 PSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNE--EPEKASRPFTLSRDGFVMG 230 (249)
T ss_dssp CBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTT--CHHHHCCTTBTTCCCBCBB
T ss_pred CccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCCCC--CCCCCCCCccCCCCCEeeE
Confidence 99999999999999999999999999999999999998899999999999999986542 3678899999999999999
Q ss_pred ceEEEEEeCChhhHHhcCC
Q psy5222 240 QASAALLIEGNKNIKILNK 258 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~ 258 (415)
||++++|||++++|++||+
T Consensus 231 EGa~~lvLe~~~~A~~rGA 249 (249)
T d1j3na1 231 EGAGVLVLEAYEHAKKRGA 249 (249)
T ss_dssp CEEEEEEEEEHHHHHHTTC
T ss_pred eEEEEEEEccHHHHHHCcC
Confidence 9999999999999999985
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=6.7e-43 Score=317.32 Aligned_cols=241 Identities=21% Similarity=0.289 Sum_probs=214.9
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.|+++||++|++|++++++++.++.. .++.++.+ .++++++.+ .+++++.+.+|+++++
T Consensus 9 ~G~v~p~G~~~~~~w~~L~~G~~~i~~~~~~~~~----~~~~~~~g--------~~~~~~~~~-~~~~~~~~~~d~~~~~ 75 (250)
T d1e5ma1 9 LGAITPIGNTLQDYWQGLMEGRNGIGPITRFDAS----DQACRFGG--------EVKDFDATQ-FLDRKEAKRMDRFCHF 75 (250)
T ss_dssp EEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCT----TSSCCEEE--------CCCSCCGGG-TSCHHHHHTSCHHHHH
T ss_pred CeeECCCCCCHHHHHHHHHcCCCeeccCCccccc----cccccccc--------eeeeccccc-ccchhhhhhcCcHHHH
Confidence 7999999999999999999999999999987766 55666666 666666665 8899999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhH-HHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNY-QYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
++.++.+||++||+..+. +.+.++++++|+..+.... ...+.....+++....|..++..+.+.++.++++.||++|
T Consensus 76 ~~~a~~~Al~~Agl~~~~--~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~G 153 (250)
T d1e5ma1 76 AVCASQQAINDAKLVINE--LNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKG 153 (250)
T ss_dssp HHHHHHHHHHHHTCCCCT--TTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHcCCChHh--hcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccCCC
Confidence 999999999999999988 8899999999965544443 3333444446777889999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCcccc
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIYG 239 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~g 239 (415)
|+++++++|+|++.||.+|+++|++|++|.+||||+|..+++..+..|..++.++..+. +|+++|||||.+++|+++|
T Consensus 154 p~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~--~p~~~~rPFD~~~dG~~~g 231 (250)
T d1e5ma1 154 PNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRND--DPLHASRPFDKDRDGFVMG 231 (250)
T ss_dssp CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTT--CGGGTCCTTBTTCCSBCBB
T ss_pred CCccccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCCCC--CCCCccCCCCCCCCCEeeE
Confidence 99999999999999999999999999999999999998899999999999999986542 4778999999999999999
Q ss_pred ceEEEEEeCChhhHHhcCC
Q psy5222 240 QASAALLIEGNKNIKILNK 258 (415)
Q Consensus 240 eGa~alvL~~~~~A~~~g~ 258 (415)
||++++|||++++|++||+
T Consensus 232 EGa~~~vLe~l~~A~~rGA 250 (250)
T d1e5ma1 232 EGSGILILEELESALARGA 250 (250)
T ss_dssp CEEEEEEEEEHHHHHHTTC
T ss_pred eeEEEEEEeeHHHHHHCcC
Confidence 9999999999999999985
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.5e-39 Score=295.55 Aligned_cols=243 Identities=20% Similarity=0.238 Sum_probs=202.1
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.++++||++|++|++++++++.++.. .+..+... ++. ++... .++.+..+.+++..++
T Consensus 9 ~G~i~p~G~~~~~~w~~L~~G~sgi~~~~~~~~~----~~~~~~~~--------~~~-~~~~~-~~~~~~~~~~~~~~~~ 74 (253)
T d2vbaa1 9 LGIVSSIGNNQQEVLASLREGRSGITFSQELKDS----GMRSHVWG--------NVK-LDTTG-LIDRKVVRFMSDASIY 74 (253)
T ss_dssp EEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHT----TCSCCEEE--------CCC-CCCTT-SSCHHHHTTCCHHHHH
T ss_pred cEEECCCCCCHHHHHHHHHcCCCccccCCccccc----cCcccccc--------ccc-ccccc-cccchhhccchhhhhh
Confidence 6999999999999999999999999998876555 34444444 442 33344 5788899999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhh-HHHhhhhhhh-cCCCCCCchhhcccccchHHHHHHHHhCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQN-YQYSLYPEFL-KKPEYLSPRYAIQFMDSNQIGIMSEIFNIR 158 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 158 (415)
...++.+|+.++++..+.. .+..++|+++|+..+... ....+..... ++...++|..++..+.+.++++|++.||++
T Consensus 75 ~~~~~~~a~~~~~l~~~~~-~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g~~ 153 (253)
T d2vbaa1 75 AFLSMEQAIADAGLSPEAY-QNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIH 153 (253)
T ss_dssp HHHHHHHHHHHHTCCHHHH-TTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCC
T ss_pred hhHHHHHHHHHhhccchhc-cCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceeccccCcc
Confidence 9999999999999975441 456799999995554443 3322322222 345567889999999999999999999999
Q ss_pred CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCccc
Q psy5222 159 GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGFIY 238 (415)
Q Consensus 159 Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~~~ 238 (415)
||+++++++|+||+.||.+|+++|++|++|++||||+| .+.+.....|..++.++... ..+|++.|||||.+++|+++
T Consensus 154 Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~-~~~~~~~~~~~~~~~ls~~~-~~~P~~~~rPFD~~~~G~v~ 231 (253)
T d2vbaa1 154 GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGE-ELCWEMACEFDAMGALSTKY-NDTPEKASRTYDAHRDGFVI 231 (253)
T ss_dssp SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEE-CCCHHHHHHHHHTTCBCCSC-TTSGGGSCCTTBTTCCSBCB
T ss_pred cceeeeeccchhHHHHHHHHHHhcchhccceeeecchh-hhhcchhhhHHHHHHHhcCC-CCCCCCCCCCCCCCCCCEee
Confidence 99999999999999999999999999999999999999 56777788899999887542 13478899999999999999
Q ss_pred cceEEEEEeCChhhHHhcCCee
Q psy5222 239 GQASAALLIEGNKNIKILNKSY 260 (415)
Q Consensus 239 geGa~alvL~~~~~A~~~g~~i 260 (415)
|||++++|||++++|++||++|
T Consensus 232 gEGa~~lvLe~le~A~~rGa~I 253 (253)
T d2vbaa1 232 AGGGGMVVVEELEHALARGAHI 253 (253)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCC
T ss_pred eeEEEEEEEccHHHHHHccCcC
Confidence 9999999999999999999876
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=2.9e-39 Score=270.74 Aligned_cols=156 Identities=34% Similarity=0.549 Sum_probs=148.9
Q ss_pred eeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceee
Q psy5222 259 SYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLL 336 (415)
Q Consensus 259 ~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v 336 (415)
+||++|+|++.++|+.+. +.|++.++.++|++||++|+++++||+||++|||||+.+|.+|..+++++|+....+++|
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v 80 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCCCcceE
Confidence 589999999999999888 778999999999999999999999999999999999999999999999999876667999
Q ss_pred eecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 337 NSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 337 ~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
++.|+++||+++|||++++++++++|++++|||++|++++ +|.++ .++.+..+++.+++++|||||||+|+|+||+|
T Consensus 81 ~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~ 159 (161)
T d1e5ma2 81 SSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENP-DPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKK 159 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSB-CTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred EecccccccccccchhhHHHHhHHhcccCeeCCccCCCCC-CCCCCcccCcCcccCCCCCEEEEeCcCcCcEeEEEEEee
Confidence 9999999999999999999999999999999999999999 99887 67778888899999999999999999999999
Q ss_pred C
Q psy5222 415 K 415 (415)
Q Consensus 415 ~ 415 (415)
|
T Consensus 160 y 160 (161)
T d1e5ma2 160 Y 160 (161)
T ss_dssp C
T ss_pred e
Confidence 8
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=3.1e-38 Score=263.37 Aligned_cols=153 Identities=27% Similarity=0.414 Sum_probs=145.1
Q ss_pred eeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceee
Q psy5222 259 SYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLL 336 (415)
Q Consensus 259 ~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v 336 (415)
+||++|+|++.++|+.+. +.|++.++.++|+++|++++++++|||||++|||||+.+|..|..+|+++|++ ++++
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~---~~~v 77 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK---EVPV 77 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS---SSEE
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcCC---cccC
Confidence 589999999999999988 77788999999999999999999999999999999999999999999999985 4899
Q ss_pred eecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 337 NSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 337 ~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
++.|+++||+++|||++++++++++|+++++||+.|++++ +|.++ +++.+.++++.+++++|||||||+|+|+||+|
T Consensus 78 ~s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~ 156 (158)
T d1ox0a2 78 SSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEV-SDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKR 156 (158)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSB-CTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred cCcccccccchhhhhhhhhcccccccccceeccccCCCCC-CcccCcccccCccccCCCCEEEEeCcCCCcEeEEEEEEe
Confidence 9999999999999999999999999999999999999999 98876 67777888889999999999999999999999
Q ss_pred C
Q psy5222 415 K 415 (415)
Q Consensus 415 ~ 415 (415)
|
T Consensus 157 ~ 157 (158)
T d1ox0a2 157 W 157 (158)
T ss_dssp C
T ss_pred c
Confidence 7
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=8.4e-37 Score=280.04 Aligned_cols=249 Identities=21% Similarity=0.259 Sum_probs=196.6
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCcccc--ccCC--------ccccccccccccccCCCCCCCCccCCCCCHH-
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQS--NFSK--------NIIAKINNFNFKNSLNKITDLSEKKKEFILH- 69 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~- 69 (415)
||+++|+|.++++||++|++|+++|++++..++. .|+. ....++++ .++.+.... .+..+
T Consensus 8 ~G~vsP~G~~~ee~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~ 78 (270)
T d2ix4a1 8 LGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAA--------FVPYGSNPG-EFDEAL 78 (270)
T ss_dssp EEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEE--------CCCBSSSTT-SBCHHH
T ss_pred ceeECCCcCCHHHHHHHHHcCCCeeccCChhhcccccccccccccccccccceeee--------ecccccCch-hhhHHH
Confidence 7999999999999999999999999999988655 2211 12233333 222211111 12222
Q ss_pred --HHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEe-cCCChhhHHHhhhhhhhcCCCCCCchhhcccccch
Q psy5222 70 --IAQKSPLFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA-GHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSN 146 (415)
Q Consensus 70 --~~~~~~~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (415)
....+++..+.+..+..+|+.+++....+. ....+.++.++ ...+....................|..+++.+.|.
T Consensus 79 ~~~~~~~~~~~~~a~~a~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (270)
T d2ix4a1 79 WLNSKAVANFIGYAVCAADEALRDAEWLPTEE-EEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNM 157 (270)
T ss_dssp HSCSTTCCHHHHHHHHHHHHHHHHTTCCCCSH-HHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTH
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhhccccc-cccccceEEeeccccccccchhhcchhhhccccccCcccCcccccch
Confidence 234567788889999999999999754331 33455666666 33444444434444445666778899999999999
Q ss_pred HHHHHHHHhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcc
Q psy5222 147 QIGIMSEIFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTC 226 (415)
Q Consensus 147 ~a~~ia~~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~ 226 (415)
++++|++.||++||+++|+++|+|++.||.+|+++|++|++|+|||||+|..+.+..+..|...+.++.... .+|+..|
T Consensus 158 ~a~~is~~~~l~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~-~~p~~~~ 236 (270)
T d2ix4a1 158 ASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFN-SSPQEAS 236 (270)
T ss_dssp HHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTT-TCGGGSC
T ss_pred hHHHHHHHhCCCCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCC-CCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999986421 3477899
Q ss_pred cCCCCCCCCccccceEEEEEeCChhhHHhcCCee
Q psy5222 227 RPFDKLAEGFIYGQASAALLIEGNKNIKILNKSY 260 (415)
Q Consensus 227 ~pfd~~~~G~~~geGa~alvL~~~~~A~~~g~~i 260 (415)
||||.+++|+++|||++++|||++++|++||++|
T Consensus 237 rPFD~~a~G~v~gEGaa~~vLe~l~~A~~rG~~I 270 (270)
T d2ix4a1 237 RPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKI 270 (270)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred CCCCCCCCCEeeEeeEEEEEEeeHHHHHHccCCC
Confidence 9999999999999999999999999999999986
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2e-37 Score=259.17 Aligned_cols=155 Identities=34% Similarity=0.541 Sum_probs=144.1
Q ss_pred eeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceee
Q psy5222 259 SYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLL 336 (415)
Q Consensus 259 ~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v 336 (415)
+||++|.|++.++|+.+. +.|++.++..+++++|+++|++|+|||||++|||||+.+|.+|..+|.++|+....+++|
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMV 80 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceE
Confidence 589999999999999887 778899999999999999999999999999999999999999999999999765557899
Q ss_pred eecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC-cccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 337 NSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN-FSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 337 ~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
++.|+++||+++|||++++++++++|++++|||++|++++ +++++ .+..++++++.+++++|||||||+|+|+||+|
T Consensus 81 ~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~-~~~~~~~~~~~~~~~~~~~a~v~sfGfgG~Na~~vl~k 158 (159)
T d1j3na2 81 SSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDP-DPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 158 (159)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSB-CTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred ecccccccccccccccchhhhhhhHhhCCEeccccccccc-cceeeeeccCcccCCCCCEEEEeCCCCCceeEEEEEEE
Confidence 9999999999999999999999999999999999999999 88887 34445666788999999999999999999997
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.4e-37 Score=256.41 Aligned_cols=155 Identities=35% Similarity=0.596 Sum_probs=141.2
Q ss_pred eeEEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceee
Q psy5222 259 SYLARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLL 336 (415)
Q Consensus 259 ~i~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v 336 (415)
+||++|+|++.++|+.+. +.|++.++.++++++|++++++|+||+||++|||||+.+|..|..+|.++|+....++++
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccccccee
Confidence 589999999999999887 667889999999999999999999999999999999999999999999999876667999
Q ss_pred eecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCccccc-CCCEEEEeccCcCCceeEEEEe
Q psy5222 337 NSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISI-NINNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 337 ~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~-~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
++.|+++||+++|||++++++++++|+++++||++|++++ ++.+. .+..+..++ +.+++++|||||||+|+|+||+
T Consensus 81 ~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil~ 159 (161)
T d2gfva2 81 SSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP-DEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFK 159 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSB-CTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEEE
T ss_pred ccccccccccHHHHHHHHHHHHHHHhcCCEeccccccccc-ccccccccccccCccCCCCcEEEEeCcCccceeEEEEEE
Confidence 9999999999999999999999999999999999999999 88776 233333333 3689999999999999999999
Q ss_pred e
Q psy5222 414 K 414 (415)
Q Consensus 414 ~ 414 (415)
+
T Consensus 160 ~ 160 (161)
T d2gfva2 160 K 160 (161)
T ss_dssp C
T ss_pred E
Confidence 6
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=5.9e-36 Score=250.69 Aligned_cols=153 Identities=37% Similarity=0.547 Sum_probs=139.0
Q ss_pred EEEEEeEEeccCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcC--CCceee
Q psy5222 261 LARLLGGVINLHATAS--PEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNH--FSKLLL 336 (415)
Q Consensus 261 ~a~i~g~~~~~~~~~~--~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~--~~~~~v 336 (415)
|++|.|+++++|+.++ +.|++.++..+|+++|++++++++||+|||+|||||+.+|.+|..+++++|+.. ..++++
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i 80 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF 80 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceee
Confidence 7899999999999988 455678888999999999999999999999999999999999999999999753 246899
Q ss_pred eecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cc-cCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 337 NSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FS-GKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 337 ~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v-~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
++.|+++||+++|||++++++++++|+++.+||++|++++ +|.++ .+ ....+++..+++++|||||||+|+|+||+
T Consensus 81 ~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~ 159 (161)
T d2ix4a2 81 SSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNP-DPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFA 159 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSB-CTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred eccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCC-CcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEE
Confidence 9999999999999999999999999999999999999999 99887 23 34455667899999999999999999998
Q ss_pred e
Q psy5222 414 K 414 (415)
Q Consensus 414 ~ 414 (415)
+
T Consensus 160 ~ 160 (161)
T d2ix4a2 160 S 160 (161)
T ss_dssp C
T ss_pred e
Confidence 6
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.7e-35 Score=244.48 Aligned_cols=148 Identities=33% Similarity=0.565 Sum_probs=139.1
Q ss_pred EEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecc
Q psy5222 261 LARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTK 340 (415)
Q Consensus 261 ~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k 340 (415)
|++|+|++.++|+.+++.|+.+++.++|+++|+++ +.|||||++|||||+.+|.+|..||+++|+.+ .++|++.|
T Consensus 1 Yaei~G~g~~~Dg~~~taP~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~--~~~v~s~K 75 (151)
T d2vbaa2 1 YAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGDK--SPAISATK 75 (151)
T ss_dssp CEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTTC--CCEEECTH
T ss_pred CEEEEEEEEecCCCCCCCcCHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCCC--Ccccccch
Confidence 78999999999999889999999999999999876 57899999999999999999999999999865 57899999
Q ss_pred cccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCC--cccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 341 SLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQAN--FSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 341 ~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+++||+++|||++++++++++|+++.+||++|++++ ++++. .++.+..+++.+++++|||||||+|+|+||+|
T Consensus 76 ~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~-~~~~~~~~v~~~~~~~~~~~a~~nsfGfGG~Na~~vl~~ 150 (151)
T d2vbaa2 76 AMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEEL-DEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRK 150 (151)
T ss_dssp HHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSB-CTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred hhccccccchhhhhhhHHHHHHHcCCcccccCcccc-ccccccccccCcCcCCCCCEEEEeCCcccceeEEEEEEE
Confidence 999999999999999999999999999999999999 88866 57778888899999999999999999999997
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=1.2e-34 Score=255.12 Aligned_cols=199 Identities=16% Similarity=0.187 Sum_probs=179.1
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.|+++||++|++|++++++++.++.. .++.++++ ++++|++.. .+++++.+.|+|.++|
T Consensus 7 ~G~vsp~g~~~~~~w~~L~~G~sgi~~~~~~~~~----~~~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~~~~ 73 (208)
T d1tqyb1 7 VGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVS----RYPATLAG--------QIDDFHAPD-HIPGRLLPQTDPSTRL 73 (208)
T ss_dssp EEEEETTEESHHHHHHHHHTTCCCEEECTTTTGG----GSSCCEEE--------CCCSCCHHH-HSCTTTGGGCCHHHHH
T ss_pred ceeECCCcCCHHHHHHHHHcCCCceecCcccCch----hccccccc--------ccccccccc-cCChhHhhcccccccc
Confidence 7999999999999999999999999999887766 66777777 777888777 7889999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhh-HHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCCCC
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQN-YQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNIRG 159 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 159 (415)
++.++.|||+|||+++.+ +++.++|+++|+..+..+ ....+.......++.++|..++++++|+++++|+..||++|
T Consensus 74 ~~~a~~~Al~~Ag~~~~~--~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G 151 (208)
T d1tqyb1 74 ALTAADWALQDAKADPES--LTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRG 151 (208)
T ss_dssp HHHHHHHHHHHTTCCGGG--SCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCS
T ss_pred ccccccccchhhhccccc--ccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccccc
Confidence 999999999999999998 889999999995544444 44344444456777889999999999999999999999999
Q ss_pred ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccC
Q psy5222 160 EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGG 215 (415)
Q Consensus 160 p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~ 215 (415)
|+++++++|+|++.||..|+++|++| +|+|||||+|..++|..+..|.+++.||+
T Consensus 152 p~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~p~~~~~f~~~~~lSt 206 (208)
T d1tqyb1 152 PSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST 206 (208)
T ss_dssp SCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC
T ss_pred eeeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccccCHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999 99999999998899999999999999984
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=5e-33 Score=246.12 Aligned_cols=201 Identities=16% Similarity=0.167 Sum_probs=172.3
Q ss_pred CEEEeCcCCCHHHHHHHHHcCCCceeeCCCccccccCCccccccccccccccCCCCCCCCccCCCCCHHHHhcCCHHHHH
Q psy5222 1 MGIVSSIGFDIASFSNSLIKGKSGIDYEINNTQSNFSKNIIAKINNFNFKNSLNKITDLSEKKKEFILHIAQKSPLFIQT 80 (415)
Q Consensus 1 ~G~v~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 80 (415)
||+++|+|.++++||++|++|+++|++++.++.. ++...+.. . ..||...+.+++++.+.+++.++|
T Consensus 8 ~G~v~p~G~~~~~~w~~L~~G~s~i~~~~~~~~~----~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~ 74 (216)
T d1tqya1 8 VGVRAPGGNGTRQFWELLTSGRTATRRISFFDPS----PYRSQVAA--------E-ADFDPVAEGFGPRELDRMDRASQF 74 (216)
T ss_dssp EEEEETTEESHHHHHHHHHHTCCCEEECCSSCCT----TSSCCEEE--------C-CCCCHHHHTCCHHHHHHSCHHHHH
T ss_pred ceeECCCCCCHHHHHHHHHcCCCEeecCCccCCC----cccccccc--------c-ccccccccccChhhhcccCcchhh
Confidence 7999999999999999999999999999876655 44444444 3 356776679999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcC-------CCCCCchhhcccccchHHHHHHH
Q psy5222 81 SIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKK-------PEYLSPRYAIQFMDSNQIGIMSE 153 (415)
Q Consensus 81 ~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~a~~ia~ 153 (415)
++.++.|||+|||+++++ +...+++++++...+........+..+... ...+.+..++..+++.++.++++
T Consensus 75 ~l~aa~~Al~dAg~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 152 (216)
T d1tqya1 75 AVACAREAFAASGLDPDT--LDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAW 152 (216)
T ss_dssp HHHHHHHHHHHHTCCTTT--CCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCccc--cccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHHHHH
Confidence 999999999999999988 889999999995554444433444433322 23456778888899999999999
Q ss_pred HhCCCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCC
Q psy5222 154 IFNIRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGK 216 (415)
Q Consensus 154 ~lgl~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~ 216 (415)
.+|++||+++++++|+|++.||.+|+++|++|++|+|||||+|..++|..+..|.+++.||.+
T Consensus 153 ~~g~~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~p~~~~~F~~~~alS~~ 215 (216)
T d1tqya1 153 AVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR 215 (216)
T ss_dssp HHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC
T ss_pred hcCccccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHCCCCCcC
Confidence 999999999999999999999999999999999999999999999999999999999999854
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.54 E-value=9.1e-14 Score=131.31 Aligned_cols=252 Identities=12% Similarity=0.054 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 76 LFIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 76 ~~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
....|+..|+++||+++|+++++ +| -+|+++..+ . ....++.+++..|
T Consensus 91 ~~~~la~~Aa~~aL~~ag~~~~d--Id----~lI~~t~t~-~-------------------------~~P~~a~~v~~~L 138 (372)
T d1teda_ 91 HAVPLAVDVSKRALAGLPYRAAE--IG----LLVLATSTG-F-------------------------IAPGVDVAIVKEL 138 (372)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGGG--EE----EEEEEESSC-C-------------------------CSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHH--CC----EEEEeccCC-C-------------------------CCchHHHHHHhhh
Confidence 35689999999999999998888 66 355444321 0 0125678999999
Q ss_pred CCCCcc--cccc-ccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCC-
Q psy5222 156 NIRGEG--FIIG-GASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDK- 231 (415)
Q Consensus 156 gl~Gp~--~~v~-~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~- 231 (415)
|++... +.+. .+|++++.||..|..+|++|..+.+||+++|.+.. .+ ...+.
T Consensus 139 Gl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~sg~~~~~LVV~~E~~s~-----------~~-------------~~~d~~ 194 (372)
T d1teda_ 139 GLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSV-----------NA-------------VFADDI 194 (372)
T ss_dssp TCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGG-----------GC-------------CCCSSH
T ss_pred ccCCceeEeeccccCccHHHHHHHHHHHHHhcCCCccceeeeehhhcc-----------cc-------------cCCCcc
Confidence 997643 3343 58999999999999999999999999999993210 00 00010
Q ss_pred --CCCCccccceEEEEEeCChhhHHhcCCeeEEEEEeEEecc-C-CCC------------C-CCCC-----HHHHHHHHH
Q psy5222 232 --LAEGFIYGQASAALLIEGNKNIKILNKSYLARLLGGVINL-H-ATA------------S-PEPN-----LNNEISVMN 289 (415)
Q Consensus 232 --~~~G~~~geGa~alvL~~~~~A~~~g~~i~a~i~g~~~~~-~-~~~------------~-~~~~-----~~~~~~~~~ 289 (415)
....+++||||+|+||++.+...... .....+.+..... . ... . ..+. ...+.++++
T Consensus 195 ~~~~~~~lfGDGAaA~ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 273 (372)
T d1teda_ 195 NDVVIHSLFGDGCAALVIGASQVQEKLE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVT 273 (372)
T ss_dssp HHHHHHHHBCEEEEEEEEEEECTTSCCC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccceeEEeccCCcccccC-CceeEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHH
Confidence 11235799999999998655432211 1122333322111 0 000 0 1111 455688999
Q ss_pred HHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHHHHHHHHHHHHhhcCccC
Q psy5222 290 SVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSGIVEIIASVIQMRKKFIH 368 (415)
Q Consensus 290 ~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip 368 (415)
++|+++|++++|||++..|-.+.. =...+.+.++-..++++.+ ..-..+||+.+||=.+.+ -..++++.+.
T Consensus 274 ~~L~~~gl~~~did~~i~Hq~~~~-----i~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L---~~~l~~g~~~ 345 (372)
T d1teda_ 274 EMLWDNGLQISDIDLWAIHPGGPK-----IIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVL---ETMVQQAESA 345 (372)
T ss_dssp HHHHHTTCCGGGCSCEEECCSCHH-----HHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHH---HHHHHSCSSS
T ss_pred HHHHhcCCCHHHhhhhhccCccHH-----HHHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHH---HHHHHhCCCC
Confidence 999999999999999999955443 3444555565432233221 112345888777533322 2234443321
Q ss_pred CCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 369 PNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 369 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
...++++..+||-|=+..++||+.
T Consensus 346 ----------------------~g~d~vll~~fG~G~s~~~~ll~~ 369 (372)
T d1teda_ 346 ----------------------KAISTGVAFAFGPGVTVEGMLFDI 369 (372)
T ss_dssp ----------------------SSSEEEEEEEEETTTEEEEEEEEE
T ss_pred ----------------------CCCCEEEEEEEcHHHhHHHHhhee
Confidence 113677888999887788888873
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.30 E-value=6.1e-12 Score=96.60 Aligned_cols=123 Identities=16% Similarity=0.120 Sum_probs=93.8
Q ss_pred CCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceee
Q psy5222 257 NKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLL 336 (415)
Q Consensus 257 g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v 336 (415)
|.+|+|+|.+++...-. +.....+...+++++|+++|++.+|||+||+|..+. .-..+..+.++-+.+++++
T Consensus 2 gl~plAri~~~a~~g~~---P~~m~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA-----~q~l~~~~~l~id~~kvN~ 73 (124)
T d1afwa2 2 NLPVLGRYIDFQTVGVP---PEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFA-----AQALYCIHKLGIDLNKVNP 73 (124)
T ss_dssp TCCCCEEEEEEEEEECC---GGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBH-----HHHHHHHHHHTCCGGGBST
T ss_pred CCcEEEEEEEEEEEecC---HHHhhhChHHHHHHHHHHcCCCcccCcEEEeccchh-----HHHHHHHHHcCCChhhccc
Confidence 67899999999886522 111356778999999999999999999999994433 3344445556655557888
Q ss_pred eecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEeeC
Q psy5222 337 NSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCKK 415 (415)
Q Consensus 337 ~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~~ 415 (415)
.+..-.+|||.||||.+.++.++.+|+++ ++.+++...=||.-.++|++|+
T Consensus 74 ~GGaiAlGHP~GaSGarlv~~l~~~L~~~----------------------------~~glas~C~ggG~G~a~~ier~ 124 (124)
T d1afwa2 74 RGGAIALGHPLGCTGARQVATILRELKKD----------------------------QIGVVSMCIGTGMGAAAIFIKE 124 (124)
T ss_dssp TCCHHHHCBCTTTHHHHHHHHHHHHSCTT----------------------------CEEEEEEEETTTEEEEEEEEEC
T ss_pred cCccceecCCcCCchHHHHHHHHHHhccC----------------------------CEEEEEEcccCCcEEEEEEEeC
Confidence 88888899999999999999999998642 3455555566788889998874
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.29 E-value=3.6e-12 Score=106.22 Aligned_cols=119 Identities=8% Similarity=0.131 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..|+++||+++|+++++ +| -+++++..+ .......+..++..||
T Consensus 49 ~~~ma~~Aa~~aL~~agi~~~d--Id----lli~~s~t~-------------------------~~~~p~~a~~v~~~Lg 97 (172)
T d1ub7a1 49 TSDLAFKAVEDLLRRHPGALEG--VD----AVIVATNTP-------------------------DALFPDTAALVQARFG 97 (172)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTT--EE----EEEEECSSC-------------------------SEEESCHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHhhcCccccc--ce----EEEEecccc-------------------------cccccchHHHHHHHhc
Confidence 5689999999999999999888 66 355554321 1112356778999999
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCCc
Q psy5222 157 IRGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEGF 236 (415)
Q Consensus 157 l~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G~ 236 (415)
.+.+++.|..+|++++.+|..|..++++|..+.+||+++|.+ +. ... ++.+...+
T Consensus 98 ~~~~~~di~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~---------------S~---------~~~-~~d~~~~~ 152 (172)
T d1ub7a1 98 LKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEAL---------------SK---------IID-WNDRATAV 152 (172)
T ss_dssp CCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECG---------------GG---------TSC-TTCHHHHT
T ss_pred cCccceeehhccccHHHHHHHHhhhhhcCCcceeEEeccccc---------------cc---------ccC-CCCcCeEE
Confidence 988999999999999999999999999999999999999941 10 011 12223456
Q ss_pred cccceEEEEEeCChh
Q psy5222 237 IYGQASAALLIEGNK 251 (415)
Q Consensus 237 ~~geGa~alvL~~~~ 251 (415)
++||||+|+||++.+
T Consensus 153 lfGDgAaA~ll~~~~ 167 (172)
T d1ub7a1 153 LFGDGGGAAVVGKVR 167 (172)
T ss_dssp TBCCEEEEEEEECCC
T ss_pred EecceeEEEEEEEcC
Confidence 799999999998765
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.28 E-value=3.4e-12 Score=106.65 Aligned_cols=119 Identities=15% Similarity=0.210 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..|+++||+++|+++++ +| -+++++..+.. .....+..+...||
T Consensus 51 ~~~la~~Aa~~al~~a~~~~~~--Id----~li~~s~~~~~-------------------------~~P~~a~~v~~~Lg 99 (174)
T d1hnja1 51 VSTMGFEAATRAIEMAGIEKDQ--IG----LIVVATTSATH-------------------------AFPSAACQIQSMLG 99 (174)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSCCSC-------------------------SSSCHHHHHHHHHT
T ss_pred chHHHHHHHHHhhhhccccccc--cc----EEEEecCCccc-------------------------cccchhhhhhhccC
Confidence 5689999999999999999988 77 46666443211 11366789999999
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCC
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEG 235 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G 235 (415)
++. +++.+..+|++++.||..|..+|++|..+.+||+++|.. +.. + .+ ......
T Consensus 100 l~~~~~~di~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~~-S~~----------~-------------~~-~d~~~~ 154 (174)
T d1hnja1 100 IKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVL-ART----------C-------------DP-TDRGTI 154 (174)
T ss_dssp CCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECH-HHH----------S-------------CT-TCHHHH
T ss_pred CCchhhhhhhhhhccHHHHHHHHHHHHhcCCcceeEEEeeehh-hcc----------c-------------CC-CCCCeE
Confidence 986 788899999999999999999999999999999999941 110 1 11 111234
Q ss_pred ccccceEEEEEeCChh
Q psy5222 236 FIYGQASAALLIEGNK 251 (415)
Q Consensus 236 ~~~geGa~alvL~~~~ 251 (415)
+++||||+|+||++.+
T Consensus 155 ~lfGDgA~A~vl~~~~ 170 (174)
T d1hnja1 155 IIFGDGAGAAVLAASE 170 (174)
T ss_dssp TTBCCEEEEEEEEEES
T ss_pred EEeceeeEEEEEEeCC
Confidence 6799999999999765
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.27 E-value=3.2e-12 Score=114.61 Aligned_cols=92 Identities=11% Similarity=-0.026 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhCC
Q psy5222 78 IQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFNI 157 (415)
Q Consensus 78 ~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 157 (415)
.+|+..+++++|+++|+++++ +| .|++|........ ...++..++...|+
T Consensus 25 ~dL~~~a~~~al~~~~i~~~~--Id----~vi~G~v~~~g~~------------------------~~n~aR~~al~aGl 74 (273)
T d1ulqa1 25 DDLLAHALSVLVDRSGVPKEE--VE----DVYAGCANQAGED------------------------NRNVARMALLLAGF 74 (273)
T ss_dssp HHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSCCSSTT------------------------TTTHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCCHHH--CC----EEEEEeccccccc------------------------cccHHHHHHHHcCC
Confidence 468889999999999999999 88 6888843211000 01456677788787
Q ss_pred --CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCC
Q psy5222 158 --RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDL 199 (415)
Q Consensus 158 --~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~ 199 (415)
.-|+++|+..|+||+.||.+|++.|++|.+|++|+||+|++.
T Consensus 75 p~~vp~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS 118 (273)
T d1ulqa1 75 PVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMS 118 (273)
T ss_dssp CTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESS
T ss_pred CCccceEEEecccchHHHHHHHHHHHHhcCCCccceeeeccccc
Confidence 348999999999999999999999999999999999999644
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.27 E-value=1.1e-11 Score=104.14 Aligned_cols=119 Identities=9% Similarity=0.111 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..|+++||+++|+++++ +| .+++++..+.. .....+..++..++
T Consensus 58 ~~~ma~~Aa~~aL~~a~~~~~d--Id----~li~~s~~~~~-------------------------~~p~~a~~v~~~l~ 106 (181)
T d1mzja1 58 IQVMGVAASRRALEHAGVDPAE--ID----LVVVSTMTNFV-------------------------HTPPLSVAIAHELG 106 (181)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSCCCC-------------------------CSSCHHHHHHHHHT
T ss_pred HHHHhHHHHHhhhhhccCChhH--Ce----EEEEeccCCcc-------------------------ccccHHHHHHHhhc
Confidence 5789999999999999999988 77 56666433211 11245678899999
Q ss_pred CCC-ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCCCC
Q psy5222 157 IRG-EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLAEG 235 (415)
Q Consensus 157 l~G-p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~~G 235 (415)
... .++.++.+|++++.||..|..+|++|..+.+||+++|.. +. . .. ++.....
T Consensus 107 ~~~~~~~Dv~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e~~-s~----------~-------------~~-~~d~~~~ 161 (181)
T d1mzja1 107 ADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERM-TD----------V-------------ID-LADRSLS 161 (181)
T ss_dssp CTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEG-GG----------G-------------SC-SSCTTTT
T ss_pred CCCccceeHHhhhccHHHHHHHHhCHhhcCCCceeEEeeeccc-cc----------c-------------CC-CCCcceE
Confidence 854 888899999999999999999999999999999999941 10 0 11 2223456
Q ss_pred ccccceEEEEEeCChh
Q psy5222 236 FIYGQASAALLIEGNK 251 (415)
Q Consensus 236 ~~~geGa~alvL~~~~ 251 (415)
+++||||+|+||++.+
T Consensus 162 ~lfGDGAaA~ll~~~~ 177 (181)
T d1mzja1 162 FLFGDGAGAAVVGPSD 177 (181)
T ss_dssp TTBCEEEEEEEEEEES
T ss_pred EEeeeeeEEEEEEeCC
Confidence 7899999999998754
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.24 E-value=4.2e-12 Score=113.21 Aligned_cols=92 Identities=8% Similarity=-0.008 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..+++++|+++|+++++ +| .|++|....... ..+++.+++...|
T Consensus 27 ~~dL~~~~~~~~l~~~~i~~~~--Id----~vi~G~~~~~~~-------------------------~~n~ar~~al~ag 75 (268)
T d1m3ka1 27 AHELGATVISAVLERAGVAAGE--VN----EVILGQVLPAGE-------------------------GQNPARQAAMKAG 75 (268)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGG--CC----EEEEECSCCTTS-------------------------CSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHH--Cc----EEEEeeccccCc-------------------------chHHHhHHHHHhC
Confidence 3478999999999999999999 88 688884321110 1245667888888
Q ss_pred CC--CccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCC
Q psy5222 157 IR--GEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDL 199 (415)
Q Consensus 157 l~--Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~ 199 (415)
+- -|+++|+..|+||+.||..|++.|++|++|++|+||+|++.
T Consensus 76 lp~~vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS 120 (268)
T d1m3ka1 76 VPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMS 120 (268)
T ss_dssp CCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEST
T ss_pred CcccccceeecccCcccchHHHHHHHHHhCCCceEEeeccccccc
Confidence 74 48899999999999999999999999999999999999654
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.19 E-value=3.3e-11 Score=92.31 Aligned_cols=122 Identities=13% Similarity=0.119 Sum_probs=94.6
Q ss_pred eeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeee
Q psy5222 259 SYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNS 338 (415)
Q Consensus 259 ~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~ 338 (415)
+|+++|.++....-.. .....+...+++++|+++|++.+|||+||+|..+. .-..+..+.++-+.+.+++.+
T Consensus 2 ~Plari~~~a~~g~dP---~~mg~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA-----~q~la~~~~l~id~~kvN~~G 73 (124)
T d1m3ka2 2 QPLGRIVSWATVGVDP---KVMGTGPIPASRKALERAGWKIGDLDLVEANEAFA-----AQACAVNKDLGWDPSIVNVNG 73 (124)
T ss_dssp CCSEEEEEEEEEECCG---GGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBH-----HHHHHHHHHHCCCGGGBSTTC
T ss_pred CcEEEEEEEEEEecCh---HHhccchHHHHHHHHHHcCCChhcccHHHhcccch-----hheeeehHhhCCChhhcCCCC
Confidence 5789999998765221 11245678999999999999999999999994332 344455555665555788888
Q ss_pred cccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 339 TKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 339 ~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
..-.+|||+||||.+.++.++..|+++ ..++.+++...=||...++++|+
T Consensus 74 GaiAlGHP~GaSGarl~~tl~~~L~~~--------------------------~~~~Glas~C~gGG~g~A~liE~ 123 (124)
T d1m3ka2 74 GAIAIGHPIGASGARILNTLLFEMKRR--------------------------GARKGLATLCIGGGMGVAMCIES 123 (124)
T ss_dssp CHHHHCCCTTTHHHHHHHHHHHHHHHH--------------------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred CccccccCcCccchhHHHHHHHHHHhc--------------------------CCCEEEEEecccccceeEEEEEe
Confidence 888899999999999999999999863 13677777777889999999986
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.18 E-value=2.1e-11 Score=108.13 Aligned_cols=93 Identities=13% Similarity=-0.005 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHh-CCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 78 IQTSIIAALQAWYN-SKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 78 ~~l~~~a~~~Al~d-ag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
.+|+..+++++|++ +|+++++ +| .|++|........ ...++..++...|
T Consensus 31 ~dL~~~~i~~~l~r~agi~~~~--Id----~vi~G~v~~~~~~------------------------g~n~aR~~al~ag 80 (262)
T d1wdkc1 31 EDMSAHLISKVLERNSKVDPGE--VE----DVIWGCVNQTLEQ------------------------GWNIARMASLMTQ 80 (262)
T ss_dssp HHHHHHHHHHHHHHCTTSCGGG--EE----EEEEECSSBSBTT------------------------TTTHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHhcCCCCHHH--ee----EEEEEeecccccc------------------------cccchhhhHhhhh
Confidence 58899999999985 8999998 88 5788743211000 0134556666666
Q ss_pred C--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCC
Q psy5222 157 I--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLS 200 (415)
Q Consensus 157 l--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~ 200 (415)
+ .-|+++|+..|+||+.||..|++.|++|.+|++|+||+|++..
T Consensus 81 ~p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~ 126 (262)
T d1wdkc1 81 IPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGH 126 (262)
T ss_dssp SCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTT
T ss_pred cccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeeccccccc
Confidence 5 3489999999999999999999999999999999999996543
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.17 E-value=6.8e-11 Score=90.69 Aligned_cols=122 Identities=15% Similarity=0.101 Sum_probs=90.4
Q ss_pred eeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhc--CCCceee
Q psy5222 259 SYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKN--HFSKLLL 336 (415)
Q Consensus 259 ~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~--~~~~~~v 336 (415)
+|+++|.+++....... ....+...+++++|+++|++.+|||+||+|..+. ....+..+.++- +.+.+++
T Consensus 1 KPlA~i~~~~~~g~~P~---~~~~~P~~A~~~~L~r~gl~~~Did~~EinEAFA-----aq~l~~~~~~~l~~d~~kvN~ 72 (125)
T d1ulqa2 1 RPLARVRAIAVAGVPPR---IMGIGPVPATRKALERAGLSFSDLGLIELNEAFA-----AQALAVLREWSLSMEDQRLNP 72 (125)
T ss_dssp CCSEEEEEEEEEECCGG---GGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBH-----HHHHHHHHHHTCCTTCTTBST
T ss_pred CCeEEEEEEEEEecCHH---HHhhccHHHHHhHhhccCcCccccchheeccccc-----hhHHHHHHHhhccCchhhcCC
Confidence 46899999987652211 1245678899999999999999999999993332 222332333322 3346778
Q ss_pred eecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 337 NSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 337 ~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
.+..-.+|||+||||.+.++.++.+|+++ ..++.++..-.-||...++++|+
T Consensus 73 ~GGaIAlGHP~GASGari~~tl~~~L~~~--------------------------~~~~G~as~C~gGG~g~A~~iE~ 124 (125)
T d1ulqa2 73 NGGAIALGHPLGASGARILTTLVHEMRRR--------------------------KVQFGLATMCIGVGQGIAVVVEG 124 (125)
T ss_dssp TCCHHHHCCCHHHHHHHHHHHHHHHHHHT--------------------------TCSEEEEEEEETTTEEEEEEEEE
T ss_pred CCCcccccCCccccchhHHHHHHHHHHhc--------------------------CCCEEEEEecccccceeEEEEEe
Confidence 88888899999999999999999999863 13667777777799999999986
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.14 E-value=5.4e-11 Score=91.75 Aligned_cols=124 Identities=15% Similarity=0.044 Sum_probs=90.9
Q ss_pred CCeeEEEEEeEEeccCCCCCCCCCHHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhc---CCCc
Q psy5222 257 NKSYLARLLGGVINLHATASPEPNLNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKN---HFSK 333 (415)
Q Consensus 257 g~~i~a~i~g~~~~~~~~~~~~~~~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~---~~~~ 333 (415)
|.+|+++|.+++...-.. .....+...+++++|+++|++.+|||+||+|..+. ....+..+.+.. ..++
T Consensus 1 Gl~pla~i~~~~~~g~dP---~~mg~~p~~A~~klL~ragl~~~did~~EinEAFA-----~q~l~~~~~~~~~~~~~ek 72 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAGVDP---AIMGYGPVPATQKALKRAGLNMADIDFIELNEAFA-----AQALPVLKDLKVLDKMNEK 72 (128)
T ss_dssp TCCCSEEEEEEEEEECCG---GGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBH-----HHHHHHHHHTTCGGGHHHH
T ss_pred CCCEEEEEEEEEEEecCH---HHhccCcHHHHHHHhhhcCccccccceEEeecccc-----hhhhhhhhhcccccCCcce
Confidence 567899999998765221 11245678899999999999999999999993321 222222222221 1125
Q ss_pred eeeeecccccchhHhhHHHHHHHHHHHHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 334 LLLNSTKSLTGHCLYSSGIVEIIASVIQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 334 ~~v~~~k~~~Gh~~~asg~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
+++.+..-.+|||+||||.+.++.++.+|++. ..++.+++...-||...++++|
T Consensus 73 vN~~GGaiAlGHP~GASGaRlv~~l~~~L~~~--------------------------~~~~Glas~C~gGG~g~A~~iE 126 (128)
T d1wdkc2 73 VNLHGGAIALGHPFGCSGARISGTLLNVMKQN--------------------------GGTFGLSTMCIGLGQGIATVFE 126 (128)
T ss_dssp BSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT--------------------------TCSEEEEEEEETTTEEEEEEEE
T ss_pred ecCCCCcccccccccccchhHHHHHHHHHHhc--------------------------CCCEEEEEecccccceeEEEEE
Confidence 67777777889999999999999999999863 1367777777789999999998
Q ss_pred e
Q psy5222 414 K 414 (415)
Q Consensus 414 ~ 414 (415)
+
T Consensus 127 r 127 (128)
T d1wdkc2 127 R 127 (128)
T ss_dssp C
T ss_pred e
Confidence 6
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.06 E-value=2.9e-10 Score=96.80 Aligned_cols=118 Identities=14% Similarity=0.090 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..|+++||+++|+++++ +| -+++.+..+. .+ ..++..+...+|
T Consensus 75 a~~la~~Aa~~aL~~ag~~~~d--Id----~lI~~s~t~~-------------------------~~-P~~aa~v~~~lg 122 (200)
T d1u0ma1 75 AKSRVPAVIQRALDDAELLATD--ID----VIIYVSCTGF-------------------------MM-PSLTAWLINEMG 122 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGG--CS----EEEEECSSSC-------------------------CS-SCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCChhh--hh----eEEEeccCCC-------------------------Cc-chhHHHHHHHHh
Confidence 4589999999999999999999 77 4565543221 01 246778999999
Q ss_pred CCCc--cccc-cccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 157 IRGE--GFII-GGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 157 l~Gp--~~~v-~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
+... .+.+ ..+|++++.+|..|..+|++|..+.|||.++|.+ +. ..+|-|.+.
T Consensus 123 ~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~~~vLvv~~e~~---------------S~---------~~~~~d~~~ 178 (200)
T d1u0ma1 123 FDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFC---------------SL---------CYQPTDLGV 178 (200)
T ss_dssp CCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEG---------------GG---------GCCTTCCSH
T ss_pred cCCCeeEeccccchhhHHHHHHHHHHHHHHhCCCCEEEEEEEecc---------------cc---------ccCCCCCCh
Confidence 9763 4445 4799999999999999999999999999999941 10 112222211
Q ss_pred ----CCccccceEEEEEeCCh
Q psy5222 234 ----EGFIYGQASAALLIEGN 250 (415)
Q Consensus 234 ----~G~~~geGa~alvL~~~ 250 (415)
...+|||||+|+||...
T Consensus 179 ~~~~~~~lFgDGAaA~ll~~~ 199 (200)
T d1u0ma1 179 GSLLCNGLFGDGIAAAVVRGR 199 (200)
T ss_dssp HHHHHHHHBCEEEEEEEEETT
T ss_pred hhhhcccccccccEEEEEecC
Confidence 13468999999999753
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.00 E-value=2.8e-09 Score=94.55 Aligned_cols=92 Identities=8% Similarity=-0.142 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHhC----CCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHH
Q psy5222 77 FIQTSIIAALQAWYNS----KLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMS 152 (415)
Q Consensus 77 ~~~l~~~a~~~Al~da----g~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 152 (415)
...|+..+++++++++ ++++++ +| .|++|........ .+++.+++
T Consensus 35 ~~~L~~~~i~~~l~r~~~~~~idp~~--Id----~vi~G~v~~~g~~-------------------------~~~aR~~a 83 (269)
T d1afwa1 35 TDYLLYNFLNEFIGRFPEPLRADLNL--IE----EVACGNVLNVGAG-------------------------ATEHRAAC 83 (269)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGG--CC----CEEEECSSSBGGG-------------------------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCccccCChhh--cC----EEEeccccccccc-------------------------cccchhhh
Confidence 3467888899999754 688888 87 4788843211111 24566777
Q ss_pred HHhCC--CCccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCC
Q psy5222 153 EIFNI--RGEGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDL 199 (415)
Q Consensus 153 ~~lgl--~Gp~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~ 199 (415)
..-|+ .-|.++|+..|+||++||..|++.|++|..|++|+||+|++.
T Consensus 84 l~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS 132 (269)
T d1afwa1 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMT 132 (269)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHH
T ss_pred hhccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeeccccc
Confidence 77786 459999999999999999999999999999999999999644
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.96 E-value=2.7e-09 Score=92.95 Aligned_cols=120 Identities=18% Similarity=0.172 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEecCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHhC
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIAGHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIFN 156 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (415)
...|+..|+++||+++|+++++ ++ .+++++..+.. ++ .+...+...++
T Consensus 102 ~~~la~~Aa~~aL~~a~~~~~d--Id----~lI~~t~t~~~-------------------------~p-~~~a~~~~~l~ 149 (235)
T d1bi5a1 102 VPRLGKEAAVKAIKEWGQPKSK--IT----HLIVCTTSGVD-------------------------MP-GADYQLTKLLG 149 (235)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGG--CC----EEEEEESSCCC-------------------------SS-CHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCChhH--Cc----EEEEecccCCc-------------------------cC-ccHHHHHHHHh
Confidence 4579999999999999999998 77 56666443211 11 22445666666
Q ss_pred CCCcc--c-cccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 157 IRGEG--F-IIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 157 l~Gp~--~-~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
+.... + .+..+|++++.+|..|..+|++|..+.|||+++|.+ +. ..++-|...
T Consensus 150 ~~~~~~~~~~~~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~~---------------S~---------~~~~~d~~~ 205 (235)
T d1bi5a1 150 LRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVT---------------AV---------TFRGPSDTH 205 (235)
T ss_dssp CCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECG---------------GG---------TCCCCCTTC
T ss_pred cCCCceEEeeecCccchHHHHHHHHHHHHHcCCCCeEEEEEeeec---------------ce---------ecCCCCCCc
Confidence 65433 3 346799999999999999999999999999999941 10 011111111
Q ss_pred -----CCccccceEEEEEeCChhh
Q psy5222 234 -----EGFIYGQASAALLIEGNKN 252 (415)
Q Consensus 234 -----~G~~~geGa~alvL~~~~~ 252 (415)
..++|||||+|+||+..+.
T Consensus 206 ~~~~v~~~lFGDGA~A~vl~~~p~ 229 (235)
T d1bi5a1 206 LDSLVGQALFGDGAAALIVGSDPV 229 (235)
T ss_dssp HHHHHHHHHBCCEEEEEEEESSCC
T ss_pred hhhhcceeeeccceEEEEEecCCC
Confidence 1346899999999987543
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=98.66 E-value=6.9e-09 Score=85.46 Aligned_cols=112 Identities=17% Similarity=0.185 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcCCCcEEEEEe-cCCChhhHHHhhhhhhhcCCCCCCchhhcccccchHHHHHHHHh
Q psy5222 77 FIQTSIIAALQAWYNSKLHKKKYKILPERIGLIIA-GHNTTQNYQYSLYPEFLKKPEYLSPRYAIQFMDSNQIGIMSEIF 155 (415)
Q Consensus 77 ~~~l~~~a~~~Al~dag~~~~~~~~~~~~~gv~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (415)
...|+..|+++++++.+ +++ +++++- +.... ......+..+...+
T Consensus 50 ~~~ma~~Aa~~al~~~~--~~~-------id~li~~t~~~~-------------------------~~~p~~a~~v~~~l 95 (166)
T d1xpma1 50 IVSMGANAAKDIITDED--KKK-------IGMVIVATESAV-------------------------DAAKAAAVQIHNLL 95 (166)
T ss_dssp HHHHHHHHHHTTCCHHH--HHH-------EEEEEEECSSCS-------------------------BSSSCHHHHHHHHT
T ss_pred HHHHHHHHHHhhhcccc--CCC-------CCeEEEeccccc-------------------------cccchhHHHHHHhh
Confidence 45799999999887653 333 444443 33211 11235678899999
Q ss_pred CCCC--ccccccccchhHHHHHHHHHHHHHcCCCCeEEEeecCCCCCHHHHHHHHHcccccCCCCCCCCCCcccCCCCCC
Q psy5222 156 NIRG--EGFIIGGASASGNIGIIHGMRLIQNNIVDACLIISAMTDLSPMEIQAFHAIGAMGGKNFYNFPKKTCRPFDKLA 233 (415)
Q Consensus 156 gl~G--p~~~v~~~cas~l~Al~~A~~~I~~G~~d~vlvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~pfd~~~ 233 (415)
|+.. .++.+..+|+++++||..|..+|++|..+.+||++.|.. + +.++ ..
T Consensus 96 g~~~~~~~~dv~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd~~---------------~------------~~~~-~~ 147 (166)
T d1xpma1 96 GIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTA---------------R------------YGLN-SG 147 (166)
T ss_dssp TCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEE---------------C------------CCTT-CS
T ss_pred ccccceEEeeecccHHHHHHHHHHHhhHHhcCCCCeEEEEEEceE---------------e------------ccCC-CC
Confidence 9865 668899999999999999999999999999999999931 1 0011 12
Q ss_pred CCccccceEEEEEeCCh
Q psy5222 234 EGFIYGQASAALLIEGN 250 (415)
Q Consensus 234 ~G~~~geGa~alvL~~~ 250 (415)
+-+.+||||+|+||++.
T Consensus 148 ~~~~fGDGA~A~ll~~~ 164 (166)
T d1xpma1 148 GEPTQGAGAVAMVIAHN 164 (166)
T ss_dssp SGGGCEEEEEEEEEEES
T ss_pred CCccCCCeeEEEEEecC
Confidence 33679999999999864
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.57 E-value=0.00029 Score=55.58 Aligned_cols=100 Identities=10% Similarity=0.041 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHH
Q psy5222 282 NNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQ 361 (415)
Q Consensus 282 ~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~ 361 (415)
..+.++++++|+++|++++|||++..| +....-..++.+.++-..++...+ .-..+||+.+||=.+.+.. +
T Consensus 48 ~~v~~~i~~~L~~~gl~~~dId~~i~H-----qa~~~i~~~v~~~lgl~~ek~~~~-~~~~~GNt~sasip~~L~~---a 118 (148)
T d1u6ea2 48 FKMGDVGRRAMDAAGVRPDQIDVFVPH-----QANSRINELLVKNLQLRPDAVVAN-DIEHTGNTSAASIPLAMAE---L 118 (148)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEC-----CSCHHHHHHHHHHHTCCTTCEECC-THHHHCBCGGGHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCcccccEEEec-----cccHHHHHHHHHhcCCCchhhhhh-hHHhhCCCccchHHHHHHH---H
Confidence 445789999999999999999999999 444445667777776543333332 3456699988876555543 4
Q ss_pred hhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 362 MRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 362 l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
++++.+. +.++++..+||.|=+-+++|++
T Consensus 119 ~~~g~i~-----------------------~Gd~vll~gfG~G~s~~a~llr 147 (148)
T d1u6ea2 119 LTTGAAK-----------------------PGDLALLIGYGAGLSYAAQVVR 147 (148)
T ss_dssp HHHTSSC-----------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred HHcCCCC-----------------------CCCEEEEEEEchhhhheEEEEe
Confidence 4555441 2477888899988777888875
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=97.18 E-value=0.0009 Score=52.73 Aligned_cols=99 Identities=15% Similarity=0.120 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHH
Q psy5222 282 NNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQ 361 (415)
Q Consensus 282 ~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~ 361 (415)
..+.++++++|+++|++++|||++..|- ....=.+.+.+.++-..+..+. .-..+||+.+||=.+.+. ..
T Consensus 47 ~~vp~~i~~~L~~~g~~~~dId~~i~Hq-----a~~~~~~~i~~~lgi~~~k~~~--~~~~~Gn~~sasip~~L~---~~ 116 (149)
T d1ub7a2 47 RVMNTATLEAIEKAGLTPEDIRLFVPHQ-----ANLRIIDAARERLGLPWERVAV--NVDRYGNTSTASIPLALK---EA 116 (149)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECC-----SCHHHHHHHHHTTTCCGGGBCC--CHHHHCBCGGGHHHHHHH---HH
T ss_pred HHHHHHHHHHHHhhccccccccEEEeec-----cchHHHHHHHhhccchhhHHHH--HHHHhcCCcchhHHHHHH---HH
Confidence 3456899999999999999999999993 3333444455545433223332 224569998887554433 44
Q ss_pred hhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 362 MRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 362 l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
++++.+. +.+.++..+||.|-+.+++|++
T Consensus 117 ~~~~~~~-----------------------~Gd~vll~g~G~G~s~ga~llr 145 (149)
T d1ub7a2 117 VDAGRIR-----------------------EGDHVLLVSFGAGLTWAAAVLT 145 (149)
T ss_dssp HHHTSSC-----------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred HHcCCCC-----------------------CCCEEEEEEEchHhhhEEEEEE
Confidence 4555442 2478889999999888888886
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=97.14 E-value=0.0013 Score=51.27 Aligned_cols=99 Identities=17% Similarity=0.156 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHH
Q psy5222 282 NNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQ 361 (415)
Q Consensus 282 ~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~ 361 (415)
..+.++++++|+++|++++|||++..|-.+ ..=.+++.+.++-..++++. .-..+||+.+|+=.+.+-. .
T Consensus 44 ~~~~~~i~~~L~~~g~~~~dId~~i~Hq~~-----~~~~~~~~~~l~l~~~k~~~--~~~~~GN~~sasip~~L~~---~ 113 (143)
T d1hnja2 44 TELAHIVDETLAANNLDRSQLDWLVPHQAN-----LRIISATAKKLGMSMDNVVV--TLDRHGNTSAASVPCALDE---A 113 (143)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEECCSC-----HHHHHHHHHHTTCCGGGBCC--CHHHHCBCGGGHHHHHHHH---H
T ss_pred hhhhHHHHHHHHHhhhcccccceEEeccCc-----hHHHHHHHHhCccchhhhhh--hhhhhcccccchHHHHHHH---H
Confidence 345789999999999999999999999443 33455555666544333432 2346799998875544433 3
Q ss_pred hhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 362 MRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 362 l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
++++.+ .+.+.++..+||.|=+.+++|++
T Consensus 114 ~~~~~~-----------------------~~Gd~vll~g~G~G~s~g~~llr 142 (143)
T d1hnja2 114 VRDGRI-----------------------KPGQLVLLEAFGGGFTWGSALVR 142 (143)
T ss_dssp HHTTCS-----------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred HHhCCC-----------------------CCCCEEEEEEEehhhhhEEEEEE
Confidence 444433 12578888999988888888875
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=96.52 E-value=0.0098 Score=46.67 Aligned_cols=100 Identities=12% Similarity=0.040 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHH
Q psy5222 282 NNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQ 361 (415)
Q Consensus 282 ~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~ 361 (415)
..+.++++++|+++|++++|||++..| +....-..++.+.++-..+.+. ...-..+||+.+||=.+. ....
T Consensus 48 ~~vp~~i~~~L~~~gl~~~dId~~i~H-----q~~~~~~~~v~~~lgi~~ek~~-~~~~~~~GNt~Sasip~~---L~~~ 118 (153)
T d1mzja2 48 ADVVPAAREALEVAGLTVGDLVAFVPH-----QANLRIIDVLVDRLGVPEHVVV-SRDAEDTGNTSSASVALA---LDRL 118 (153)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEEC-----CSCHHHHHHHHHHHTCCTTSEE-CCTHHHHCBCTTHHHHHH---HHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCCEEEEc-----CCcHHHHHHHHHHhCCCchhcc-hhhhhhcCCcccchHHHH---HHHH
Confidence 456788999999999999999999999 4444556666666765433332 222344688777753322 2334
Q ss_pred hhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 362 MRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 362 l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
++++.+. +...++..+||.|=+.++++|+
T Consensus 119 ~~~~~~~-----------------------~Gd~ill~~fG~G~s~~~~~l~ 147 (153)
T d1mzja2 119 VRSGAVP-----------------------GGGPALMIGFGAGLSYAGQALL 147 (153)
T ss_dssp HHHTSSC-----------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred HHcCCCC-----------------------CCCEEEEEEEchhhhhhEEEEE
Confidence 4544331 2467788889876665566654
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=96.23 E-value=0.0028 Score=49.70 Aligned_cols=102 Identities=9% Similarity=0.095 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHHHHHHHHHH
Q psy5222 281 LNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSGIVEIIASV 359 (415)
Q Consensus 281 ~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg~~~l~~~~ 359 (415)
...+..+++++|+++|++++|||++.+| .....-...+.+.++-..+.++.+ ..-..+||+.+|+=.+.+ -
T Consensus 42 i~~~~~~i~~~l~~~g~~~~did~~~~H-----q~~~~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L---~ 113 (148)
T d1u0ma2 42 MEPLAPALKELAGEHGWDASDLDFYIVH-----AGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDAL---R 113 (148)
T ss_dssp HHHHHHHHHHHHHTTSCCSSCCSCCEEE-----CSHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCEEEEC-----CCCHHHHHHHHHHhCCChhhhhHHHHHHHhcCCCCcchHHHHH---H
Confidence 3567889999999999999999999999 333344555666665332233221 122446999888733322 3
Q ss_pred HHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEe
Q psy5222 360 IQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILC 413 (415)
Q Consensus 360 ~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~ 413 (415)
.+++++.+. +..+++..+||.|=+-.++|++
T Consensus 114 ~~~~~~~~~-----------------------~Gd~ill~gfG~G~s~~~~llr 144 (148)
T d1u0ma2 114 RLFDEGGVE-----------------------EGARGLLAGFGPGITAEMSLGC 144 (148)
T ss_dssp HHHHSCCCC-----------------------SSCCCEEEEEETTTEEEEEEEE
T ss_pred HHHHcCCCC-----------------------CCCEEEEEEEchHhEeeEEEEE
Confidence 344444432 1345678889987777777776
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=94.84 E-value=0.056 Score=42.11 Aligned_cols=110 Identities=9% Similarity=-0.000 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHHHHHHHHHH
Q psy5222 281 LNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSGIVEIIASV 359 (415)
Q Consensus 281 ~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg~~~l~~~~ 359 (415)
...+.+.+++.|+++|++.+|||++.+| .+...=..++++.++-..++++.+ ..-..+|++.+||=...+-...
T Consensus 41 ~~~i~~~~~~~l~~~gl~~~di~~~v~H-----qgg~~Ild~v~~~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~ 115 (154)
T d1bi5a2 41 SKNITKALVEAFEPLGISDYNSIFWIAH-----PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR 115 (154)
T ss_dssp HHHHHHHHHHHHGGGTCCCTTSSEEEEC-----CSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCccccceEeec-----cccHHHHHHHHHHhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHH
Confidence 3556788999999999999999999999 444445566666666443333322 1234568888887444443332
Q ss_pred HHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 360 IQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 360 ~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
.. +...+.... -...+.++..+||-|=+..+++|++
T Consensus 116 ~~---~~~~~~~~~----------------g~~~~~~~~~aFG~Glt~~~~llr~ 151 (154)
T d1bi5a2 116 KK---STQNGLKTT----------------GEGLEWGVLFGFGPGLTIETVVLRS 151 (154)
T ss_dssp HH---HHHTTCSBT----------------TTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred Hh---hhccCCccc----------------CCCcCEEEEEEEchHHhHHHHHHhc
Confidence 22 222221110 0123678899999999999999885
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=94.46 E-value=0.068 Score=41.91 Aligned_cols=110 Identities=12% Similarity=0.086 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHHHHHHHHHH
Q psy5222 281 LNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSGIVEIIASV 359 (415)
Q Consensus 281 ~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg~~~l~~~~ 359 (415)
...+.+.+++.|+++|++.+|||++.+| .+...=..++++.++-..+.+..+ ..-..+|++.+||=..-+-.+.
T Consensus 46 ~~~v~~~v~~~l~~~gl~~~di~~~v~H-----qgg~~Ild~i~~~L~L~~~~l~~s~~vl~~yGNtSSaSI~~vL~~~~ 120 (160)
T d1ee0a2 46 AKNIENAAEKALSPLGITDWNSVFWMVH-----PGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVR 120 (160)
T ss_dssp HHHHHHHHHHHHGGGTCCCGGGSEEEEC-----CSSHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccCCccccceEeec-----CCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCccchHHHHHHHHH
Confidence 4566788899999999999999999999 444444556666665433333322 2234568888887544443333
Q ss_pred HHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 360 IQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 360 ~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
+++...+.... .....+++..+||.|=+-..++|++
T Consensus 121 ---~~~~~~~~~~~----------------g~~~d~~ll~afG~Glt~~~~llr~ 156 (160)
T d1ee0a2 121 ---KRSMAEGKSTT----------------GEGLDCGVLFGFGPGMTVETVVLRS 156 (160)
T ss_dssp ---HHHHHTTCSBT----------------BTTBSEEEEEEEETTTEEEEEEEEE
T ss_pred ---hhhhhcCCCCc----------------CCCcCEEEEEEEChHHHHHHHHHee
Confidence 22222211110 0124678999999999999999886
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=92.83 E-value=0.19 Score=39.01 Aligned_cols=110 Identities=11% Similarity=0.009 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeee-ecccccchhHhhHHHHHHHHHH
Q psy5222 281 LNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLN-STKSLTGHCLYSSGIVEIIASV 359 (415)
Q Consensus 281 ~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~-~~k~~~Gh~~~asg~~~l~~~~ 359 (415)
...+.+.+++.|++++++.+|||++..|- +...=..++++.++-...++..+ ..-..+|++.+||=...+-.+.
T Consensus 42 ~~~i~~~~~~~l~~~~~~~~did~~i~Hq-----gg~~Ild~v~~~L~L~~~k~~~s~~~l~~~GN~sSasip~~L~~~~ 116 (156)
T d1u0ua2 42 SANIENCMVEAFSQFKISDWNKLFWVVHP-----GGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTR 116 (156)
T ss_dssp HHHHHHHHHHHHGGGTCCCGGGSEEEECC-----SCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCChhhCceEeecC-----CcHHHHHHHHHHhCCCcccchhhHHHHhhcCCCCcccHHHHHHHHH
Confidence 45567889999999999999999999994 44444556666666433333321 1234568888886444333332
Q ss_pred HHhhcCccCCCCCCCCCCCCCCCcccCcccccCCCEEEEeccCcCCceeEEEEee
Q psy5222 360 IQMRKKFIHPNLNLESPIDNQANFSGKKSISININNVMSNSFGFSGINSSIILCK 414 (415)
Q Consensus 360 ~~l~~~~ip~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~s~g~gG~~~~~vl~~ 414 (415)
.. +...+... .-...++++..+||-|=+...+||++
T Consensus 117 ~~---~~~~~~~~----------------~~~~~~~~~~~gfG~Glt~~~~llr~ 152 (156)
T d1u0ua2 117 KA---SLQNGCST----------------TGEGLEMGVLFGFGPGLTIETVVLKS 152 (156)
T ss_dssp HH---HHHHTCSB----------------SBTTBSEEEEEEEETTTEEEEEEEEE
T ss_pred Hh---hhhccCCC----------------cCCCCCEEEEEEECHHHhHHHHHHee
Confidence 22 21111110 00124788999999998888998875
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=87.37 E-value=0.43 Score=37.55 Aligned_cols=48 Identities=6% Similarity=-0.011 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEecCCCCCC-CCHHHHHHHHHHHhc
Q psy5222 281 LNNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPL-GDKIEISAIKEVYKN 329 (415)
Q Consensus 281 ~~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~-~d~~E~~al~~~~~~ 329 (415)
..-..++.+++|+++|++++|||++....+ |+. ..+.-+..+++.++.
T Consensus 50 ~~ma~~Aa~~aL~~agi~~~dIdlli~~s~-t~~~~~p~~a~~v~~~Lg~ 98 (172)
T d1ub7a1 50 SDLAFKAVEDLLRRHPGALEGVDAVIVATN-TPDALFPDTAALVQARFGL 98 (172)
T ss_dssp HHHHHHHHHHHHHHSTTTTTTEEEEEEECS-SCSEEESCHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHhhcCcccccceEEEEecc-cccccccchHHHHHHHhcc
Confidence 344578999999999999999999876543 432 233344455555663
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=85.83 E-value=1.3 Score=34.53 Aligned_cols=78 Identities=6% Similarity=0.006 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEecCCCCCCCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHHH
Q psy5222 282 NNEISVMNSVLKQSGLKKNMIDYLNTHGSSSPLGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVIQ 361 (415)
Q Consensus 282 ~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~~ 361 (415)
.--.++.+++|++++++++|||++....+.....-+.-+..+++.++-+ .....-. +...++++..+-.+...
T Consensus 53 ~la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~--~~~~~di-----~~~C~g~~~al~~A~~~ 125 (174)
T d1hnja1 53 TMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK--GCPAFDV-----AAACAGFTYALSVADQY 125 (174)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCC--SSCEEEE-----CCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCC--chhhhhh-----hhhhccHHHHHHHHHHH
Confidence 3346899999999999999999876653332223344555666667643 1221111 12233344455555555
Q ss_pred hhcCc
Q psy5222 362 MRKKF 366 (415)
Q Consensus 362 l~~~~ 366 (415)
++.+.
T Consensus 126 i~sg~ 130 (174)
T d1hnja1 126 VKSGA 130 (174)
T ss_dssp HHTTS
T ss_pred HhcCC
Confidence 56554
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=84.83 E-value=1.5 Score=34.55 Aligned_cols=76 Identities=8% Similarity=-0.049 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEecCCCCC-CCCHHHHHHHHHHHhcCCCceeeeecccccchhHhhHHHHHHHHHHH
Q psy5222 282 NNEISVMNSVLKQSGLKKNMIDYLNTHGSSSP-LGDKIEISAIKEVYKNHFSKLLLNSTKSLTGHCLYSSGIVEIIASVI 360 (415)
Q Consensus 282 ~~~~~~~~~aL~~Agl~~~dId~v~~h~~gt~-~~d~~E~~al~~~~~~~~~~~~v~~~k~~~Gh~~~asg~~~l~~~~~ 360 (415)
.--.++.+++|++++++++|||++..+. .++ ..-..-+..++..++.. .... .--+. ..++++..+-.+..
T Consensus 60 ~ma~~Aa~~aL~~a~~~~~dId~li~~s-~~~~~~~p~~a~~v~~~l~~~--~~~~--~Dv~~---~C~g~~~aL~~A~~ 131 (181)
T d1mzja1 60 VMGVAASRRALEHAGVDPAEIDLVVVST-MTNFVHTPPLSVAIAHELGAD--NAGG--FDLSA---ACAGFCHALSIAAD 131 (181)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEEC-SCCCCCSSCHHHHHHHHHTCT--TCEE--EEEEC---GGGHHHHHHHHHHH
T ss_pred HHhHHHHHhhhhhccCChhHCeEEEEec-cCCccccccHHHHHHHhhcCC--Cccc--eeHHh---hhccHHHHHHHHhC
Confidence 3447899999999999999999887653 333 23333455566666543 2221 11121 23344445555555
Q ss_pred HhhcC
Q psy5222 361 QMRKK 365 (415)
Q Consensus 361 ~l~~~ 365 (415)
.++.+
T Consensus 132 ~i~~~ 136 (181)
T d1mzja1 132 AVESG 136 (181)
T ss_dssp HHHHS
T ss_pred HhhcC
Confidence 55554
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=84.67 E-value=0.77 Score=36.95 Aligned_cols=25 Identities=20% Similarity=0.155 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEec
Q psy5222 284 EISVMNSVLKQSGLKKNMIDYLNTH 308 (415)
Q Consensus 284 ~~~~~~~aL~~Agl~~~dId~v~~h 308 (415)
..++++++|+++|++++|||++...
T Consensus 79 a~~Aa~~aL~~ag~~~~dId~lI~~ 103 (200)
T d1u0ma1 79 VPAVIQRALDDAELLATDIDVIIYV 103 (200)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEE
T ss_pred HHHHHHHHHHHcCCChhhhheEEEe
Confidence 4789999999999999999998654
|