Psyllid ID: psy5279

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310
Protein Sequence
MGDCIGRDEGLYSVIARNIASTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQEELISTAFTSHLVNKPSSDSSTL
Secondary Structure (PSIPRED)
ccccccccccEEEEEEEcccccEEEEEEEEEEcccccccccccccccccccccccccccccccccccccEEEEEEEEEEEcccccccEEEEcccccEEccEEEEEccccccEEEEEcccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccEEEccccccccEEccccccccccEEEEEEEEcccccEEEEEEEcccccccHHHHHHHHHHHHHcccccccEEEHHHcccccEEEEEEcccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccEEcccccccEEEEccccccEEEEEccccccccccccccccccccEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccEEcccccccEEEcccccccEEEEEccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccHHHHHccccHHHHHHHHcccccccHHHHHHHHHHHHHccccccccHHHHcccccccccEEEEEEEEccccccHHHHcccccccHHHHHHHHHHHHHHHHcccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccHHHHHHHcccccccccccccccccccccccccccccHHHHHcccccccHHHHHHHHHHHHHcccccccEEEEEEEccccccccHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEEccccEEEEEEccccccccccHHccccHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccccEEEEEccccEEEEcccEEEEccccccccccccHHcccccccccccccHHHHHHHHHcccccccccccHHHHHHcccEEEEEccccHHHHcHHHHHHHHHHHcccccccHHHHHHcccccccccccccccHHHHHcHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHccccccccHHHHHHcHHHHHHHHHHHcccccccccHHHHHHcccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEccccEEEEEEEEccccEEEEEEEEEEEcccccccEEcccccEEEEccccccccccccHHcccccEEEEEcccccccccEEEEEEEccccEEEEcEEEEEcccccccEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccHHHcEEEEEEEEEEccEEEEEEEEcccccEEEEEEEEcccHHHHHHHHHHHHHHcccccccEccEEEEEEcccEEEEEEEcccccEHHHHccccccccHHHHHHHHHHHHHHHHHHHHccEEEccccHHHEEEcccccccEEEEEccccEEEccccEEEEEcccHHHcccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccHHHHHcccHHHcccHHHcccccccccccccccccHHHHHHHHHccccccEEccccccccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccEcccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccEEccccccccccHHHHccccccEEEEEEEEccccccEEEEEEEcccccHHHHHHHHHHHHHHcccccHEcHHHcccccccccHHHEEEEHHccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccHccccccccccccccccccEEccccEEEccccccccccEEEEEEcccccccEEHEHEEHHccccccEEccccccccccccccccEEEHEEEHHHHHccccccccccHHccccccccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccEEEEEEEccccEEEEEEcccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccEEEccccHHHHEEcccccccEEEEEccccEEcccccEEEEEEEcccHHHccHHHHcccEEcHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHccHHHcccHHHHHccccccccccccHcccccccccccccccccccEEEEccccccccHHHHccccEcHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHccccHHccccHHHHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
mgdcigrdegLYSVIARNIASTISHSVtvhvedneneysyrtyargrqvktrtkpitdaydfgdelgrgVTGIVYHAVERSSGRNYAAKVMtgkgtishSVTVhvedneneysyrtyargrqvktrtkpitdaydfgdelgrgvtgtiSHSVTvhvedneneysyrtyargrqvktrtkpitdaydfgdelgrgVTGIVYHAVERSSGRNYAAKVMtgkgnqyksLFKNELDIMNQLCHRNLVrlhdsyetkdSFTIISELAgggellhsltrqsyytEYDIAHYIRQLLSGLDYMHRLSIahlgltpgdllvahpggrhllltdfglsrritsfgklnpleyDVRYVRQAlrhpwlnfadrkptedtpklntDALRNYYNLYKDWYGNAAVRRYyrrrplnscythpsrmiyppgtqftpeptpdkvlvsrdlrdvktwednvpnrgpdvktwednvpnrgpggellhsltrqsyyteYDIAHYIRQLLSGLDYMHRLSIahlgltpgdllvahpggrhllltdfglsrritsfgklnpleygngqykvAVTPAMKHLQAITeaghtptlaqdppplnysvedspiewstepptdkyqfisEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEaykpsttasNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIAdtadksriprTIREYREQsantanlrdvktwednvpnrgpaidydlnvvkseshyqngpdtyllqlrdvdFPVRLREYIKVastrpdlrlstgfncldtsenghldwkapviRERRrftdvmdeeiDDERRNRINKYGAADTYTLRRLRHeigtrpeahVEADALIEsrrdghapffrekpitipvvigdklemkclavgepkpviqwfklgtstlcylpiviptthkdaycVTSVLDGLQYLHWRglchlniepdnVVMASVRSVQVKLIDLGCTQRVtklgtlihpintpnpefaapevlaeepifpqtdvwSAGVLAYVLLsgaspfrgqsepetrqnvNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITlannidhefwhvkdlkretnyTFRLSAKnvigwsekgipsalfktkeqapevlaeepifpqtdvwSAGVLAYVLLsgaspfrgqsepetrqnvNFVRYRFEYLFKELTQEATRFLMLIFkrapgkrptveechenrwlvpseyMIKKRERAVFLGNRLKEFSDEYHDlknkqftsDSLSSLHKTLTRSNSIQEELISTAFTShlvnkpssdsstl
Flexible Loop (DISEMBL)
mgdcigrdEGLYSVIARNiastishsvtvhvedneneysyrtyargrqvktrtkpitdaydfgdelgrGVTGIVYHAVERSSGRNYAAKVMTgkgtishsvtvhvedneneysyrtyargrqvktrtkpitdaydfgdelgrgvtgtishsvtvhvedneneysyrtyargrqvktrtkpitdaydfgdelgrGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITsfgklnpleYDVRYVRQALRhpwlnfadrkptedtpklntdALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTPDKVLVSRDlrdvktwednvpnrgpdvktwednvpnrgpggeLLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFgklnpleygNGQYKVAVTPAMKHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNReqiadtadksriprtireyreqsantanlrdvktwednvpnrgpaidYDLNVVKSEShyqngpdtyllqLRDVDFPVRLREYIkvastrpdlrlstgfncldtsenghldwkapvirerrrftdvmdeeidderrnrinkygaadtytlrrlrheigtrpeahVEADALIESrrdghapffrekpitipvVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGaspfrgqsepetrqnvnFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGaspfrgqsepetrqnvnFVRYRFEYLFKELTQEATRFLMLIFKrapgkrptveechenrwlvpseymikKRERAVFLGNRLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQEELISTaftshlvnkpssdsstl
Low Complexity Region (SEG)
MGDCIGRDEGLYSVIARNIASTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQEELISTAFTSHLVNKPSSDSSTL
Disordered region (IsUnstruct)
****IGRDEGLYSVIARNIASTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADR*******KLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYP**********************V*TW*************************ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAIT*********************************KYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKN********************************VKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVIRERRRFTDVMD********NRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA*************NVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA*************NVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDEY**************************************************
Disordered Region (DISOPRED)
****IGRDEGLYSVIARNIASTISHSVTVHVEDNENE**********************YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSY*T*************************************************************TKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN*YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTP***********VKTWEDNVPNRGPDVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVK******PNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIK*******************SENGHLDWKAPVIRERRRFTDVMDEEIDD********************RHEIGTRPEAHVEADALIESRRDG***FFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRE**YTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVP*****************LKEFSDEYHD************************************************
Disordered Region (DISEMBL)
MGDCIGRDEGLYSVIARNIASTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQEELISTAFTSH************
Disordered Region (DISPRO)
*GDCIGRDEGLYSVIARNIASTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQVKTR**********************************NEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH***TPGDLLVAHPGGRHLLLTD**LS********LNPLEYGNGQYKVAVTPAMKHLQAITEAGHTPTLAQDP***NYS***SPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQEELIST*****************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGDCIGRDEGLYSVIARNIASTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQEELISTAFTSHLVNKPSSDSSTL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	1310	2.2.26 [Sep-21-2011]
E9PT87	786	Myosin light chain kinase	yes	N/A	0.107	0.179	0.422	1e-25
Q3UIZ8	795	Myosin light chain kinase	yes	N/A	0.107	0.177	0.422	3e-25
P11799	1906	Myosin light chain kinase	no	N/A	0.137	0.094	0.333	4e-25
Q6PDN3	1941	Myosin light chain kinase	no	N/A	0.137	0.092	0.333	1e-24
A8C984	715	Myosin light chain kinase	no	N/A	0.122	0.223	0.368	3e-24
Q28824	1176	Myosin light chain kinase	no	N/A	0.137	0.153	0.327	3e-24
P29294	1147	Myosin light chain kinase	yes	N/A	0.137	0.156	0.333	3e-24
Q32MK0	819	Myosin light chain kinase	no	N/A	0.128	0.205	0.368	4e-24
Q5RDG7	819	Myosin light chain kinase	yes	N/A	0.128	0.205	0.368	4e-24
Q15746	1914	Myosin light chain kinase	no	N/A	0.137	0.094	0.322	3e-23

>sp|E9PT87|MYLK3_RAT Myosin light chain kinase 3 OS=Rattus norvegicus GN=Mylk3 PE=1 SV=1

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/142 (42%), Positives = 90/142 (63%), Gaps = 1/142 (0%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
           LG G  G V+   ERS+G   AAK++  K  + +   KNE++IMNQL H NL++L+D++E
Sbjct: 488 LGGGRFGQVHRCTERSTGLALAAKIIKVKNIKDREDVKNEINIMNQLSHVNLIQLYDAFE 547

Query: 251 TKDSFTIISELAGGGELLHSLTRQSYY-TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
           +K+SFT+I E   GGEL   +T + Y+ TE D+  + RQ+  G+ Y+H+  I HL L P 
Sbjct: 548 SKNSFTLIMEYVDGGELFDRITDEKYHLTELDVVLFTRQICEGVHYLHQHYILHLDLKPE 607

Query: 310 DLLVAHPGGRHLLLTDFGLSRR 331
           ++L     G  + + DFGL+RR
Sbjct: 608 NILCVSQTGHQIKIIDFGLARR 629

Calmodulin-dependent kinase that phosphorylates MYL2 in vitro. Promotes sarcomere formation in cardiomyocytes. Increases cardiomyocyte contractility.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1EC: 8

>sp|Q3UIZ8|MYLK3_MOUSE Myosin light chain kinase 3 OS=Mus musculus GN=Mylk3 PE=1 SV=1

 Score =  118 bits (296), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/142 (42%), Positives = 89/142 (62%), Gaps = 1/142 (0%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
           LG G  G V+   ERS+G   AAK++  K  + +   KNE++IMNQL H NL++L+D++E
Sbjct: 497 LGGGRFGQVHRCTERSTGLALAAKIIKVKNVKDREDVKNEVNIMNQLSHVNLIQLYDAFE 556

Query: 251 TKDSFTIISELAGGGELLHSLTRQSYY-TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
           +K SFT+I E   GGEL   +T + Y+ TE D+  + RQ+  G+ Y+H+  I HL L P 
Sbjct: 557 SKSSFTLIMEYVDGGELFDRITDEKYHLTELDVVLFTRQICEGVHYLHQHYILHLDLKPE 616

Query: 310 DLLVAHPGGRHLLLTDFGLSRR 331
           ++L     G  + + DFGL+RR
Sbjct: 617 NILCVSQTGHQIKIIDFGLARR 638

May play a role in smooth muscle contraction.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

>sp|P11799|MYLK_CHICK Myosin light chain kinase, smooth muscle OS=Gallus gallus PE=1 SV=2

 Score =  118 bits (295), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 101/186 (54%), Gaps = 6/186 (3%)

Query: 157  EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 216
            E  E E +YRT      + T  K ++D Y+  + LG G  G V+  VE+ +G+ +A K  
Sbjct: 1430 EGKETEVNYRTVT----INTEQK-VSDVYNIEERLGSGKFGQVFRLVEKKTGKVWAGKFF 1484

Query: 217  TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY 276
                 + K   ++E+ IMN L H  LV+  D++E K +  ++ E+  GGEL   +  + +
Sbjct: 1485 KAYSAKEKENIRDEISIMNCLHHPKLVQCVDAFEEKANIVMVLEMVSGGELFERIIDEDF 1544

Query: 277  -YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
              TE +   Y+RQ+  G++Y+H+  I HL L P +++  +  G  + L DFGL+RR+ S 
Sbjct: 1545 ELTERECIKYMRQISEGVEYIHKQGIVHLDLKPENIMCVNKTGTSIKLIDFGLARRLESA 1604

Query: 336  GKLNPL 341
            G L  L
Sbjct: 1605 GSLKVL 1610

Phosphorylates a specific serine in the N-terminus of a myosin light chain, which leads to the formation of calmodulin/MLCK signal transduction complexes which allow selective transduction of calcium signals.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q6PDN3|MYLK_MOUSE Myosin light chain kinase, smooth muscle OS=Mus musculus GN=Mylk PE=1 SV=3

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 6/186 (3%)

Query: 157  EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 216
            ++ E E  YRT      V T  K ++D YD  + LG G  G V+  VE+ +G+ +A K  
Sbjct: 1463 DEKEPEVDYRTVT----VNTEQK-VSDVYDIEERLGSGKFGQVFRLVEKKTGKIWAGKFF 1517

Query: 217  TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY 276
                 + K   + E+ IMN L H  LV+  D++E K +  ++ E+  GGEL   +  + +
Sbjct: 1518 KAYSAKEKDNIRQEISIMNCLHHPKLVQCVDAFEEKANIVMVLEIVSGGELFERIIDEDF 1577

Query: 277  -YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
              TE +   Y+RQ+  G++Y+H+  I HL L P +++  +  G  + L DFGL+RR+ + 
Sbjct: 1578 ELTERECIKYMRQISEGVEYIHKQGIVHLDLKPENIMCVNKTGTRIKLIDFGLARRLENA 1637

Query: 336  GKLNPL 341
            G L  L
Sbjct: 1638 GSLKVL 1643

Calcium/calmodulin-dependent myosin light chain kinase implicated in smooth muscle contraction via phosphorylation of myosin light chains (MLC). Also regulates actin-myosin interaction through a non-kinase activty. Phosphorylates PTK2B/PYK2 and myosin light-chains. Involved in the inflammatory response (e.g. apoptosis, vascular permeability, leukocyte diapedesis), cell motility and morphology, airway hyperreactivity and other activities relevant to asthma. Required for tonic airway smooth muscle contraction that is necessary for physiological and asthmatic airway resistance. Necessary for gastrointestinal motility. Implicated in the regulation of endothelial as well as vascular permeability, probably via the regulation of cytoskeletal rearrangements. In the nervous system it has been shown to control the growth initiation of astrocytic processes in culture and to participate in transmitter release at synapses formed between cultured sympathetic ganglion cells. Critical participant in signaling sequences that result in fibroblast apoptosis. Plays a role in the regulation of epithelial cell survival. Required for epithelial wound healing, especially during actomyosin ring contraction during purse-string wound closure. Mediates RhoA-dependent membrane blebbing. Triggers TRPC5 channel activity in a calcium-dependent signaling, by inducing its subcellular localization at the plasma membrane. Promotes cell migration (including tumor cells) and tumor metastasis. PTK2B/PYK2 activation by phosphorylation mediates ITGB2 activation and is thus essential to trigger neutrophil transmigration during acute lung injury (ALI). May regulate optic nerve head astrocyte migration. Probably involved in mitotic cytoskeletal regulation. Regulates tight junction probably by modulating ZO-1 exchange in the perijunctional actomyosin ring. Mediates burn-induced microvascular barrier injury; triggers endothelial contraction in the development of microvascular hyperpermeability by phosphorylating MLC. Essential for intestinal barrier dysfunction. Mediates Giardia spp.-mediated reduced epithelial barrier function during giardiasis intestinal infection via reorganization of cytoskeletal F-actin and tight junctional ZO-1. Necessary for hypotonicity-induced Ca(2+) entry and subsequent activation of volume-sensitive organic osmolyte/anion channels (VSOAC) in cervical cancer cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

>sp|A8C984|MYLK3_DANRE Myosin light chain kinase 3 OS=Danio rerio GN=mylk3 PE=2 SV=1

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 3/163 (1%)

Query: 172 RQVKTRTKPITDAYDFG--DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
           R V  +  PI   Y     + LG G  G V+   E SSG   AAK++  +G + +   KN
Sbjct: 389 RIVSAKQVPINSYYAVNPVEVLGGGRFGQVHKCAELSSGLTLAAKIIKVRGMKERDEVKN 448

Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQ 288
           E+ +MNQL H NL++L+D++E++ + T+I E   GGEL   +  +SY  TE D   + RQ
Sbjct: 449 EIGVMNQLNHVNLIQLYDAFESRTNLTLIMEYVEGGELFERIIDESYQLTELDAIVFTRQ 508

Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
           +  G+ Y+H+  I HL L P ++L  +  G  + + DFGL+R+
Sbjct: 509 ICEGVQYLHQQYILHLDLKPENILCVNSTGNQIKIIDFGLARK 551

Kinase that phosphorylates MYL2 in vitro (By similarity). Increases cardiomyocyte contractility (By similarity). Required for sarcomere formation in the developing heart.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q28824|MYLK_BOVIN Myosin light chain kinase, smooth muscle OS=Bos taurus GN=MYLK PE=1 SV=1

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 6/186 (3%)

Query: 157 EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 216
           ++ E E  YRT      V T  K ++D YD  + LG G  G V+  VE+ +G+ +A K  
Sbjct: 702 DEKEPEVDYRTVT----VNTEQK-VSDFYDIEERLGSGKFGQVFRLVEKKTGKIWAGKFF 756

Query: 217 TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY 276
                + K   + E+ IMN L H  LV+  D++E K +  ++ E+  GGEL   +  + +
Sbjct: 757 KAYSAKEKENIRQEISIMNCLHHPKLVQCVDAFEEKANIVMVLEIVSGGELFERIIDEDF 816

Query: 277 -YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
             TE +   Y++Q+  G++Y+H+  I HL L P +++  +  G  + L DFGL+RR+ + 
Sbjct: 817 ELTERECIKYMKQISEGVEYIHKQGIVHLDLKPENIMCVNKTGTRIKLIDFGLARRLENA 876

Query: 336 GKLNPL 341
           G L  L
Sbjct: 877 GSLKVL 882

Calcium/calmodulin-dependent myosin light chain kinase implicated in smooth muscle contraction via phosphorylation of myosin light chains (MLC). Also regulates actin-myosin interaction through a non-kinase activty. Phosphorylates PTK2B/PYK2 and myosin light-chains. Involved in the inflammatory response (e.g. apoptosis, vascular permeability, leukocyte diapedesis), cell motility and morphology, airway hyperreactivity and other activities relevant to asthma. Required for tonic airway smooth muscle contraction that is necessary for physiological and asthmatic airway resistance. Necessary for gastrointestinal motility. Implicated in the regulation of endothelial as well as vascular permeability, probably via the regulation of cytoskeletal rearrangements. In the nervous system it has been shown to control the growth initiation of astrocytic processes in culture and to participate in transmitter release at synapses formed between cultured sympathetic ganglion cells. Critical participant in signaling sequences that result in fibroblast apoptosis. Plays a role in the regulation of epithelial cell survival. Required for epithelial wound healing, especially during actomyosin ring contraction during purse-string wound closure. Mediates RhoA-dependent membrane blebbing. Triggers TRPC5 channel activity in a calcium-dependent signaling, by inducing its subcellular localization at the plasma membrane. Promotes cell migration (including tumor cells) and tumor metastasis. PTK2B/PYK2 activation by phosphorylation mediates ITGB2 activation and is thus essential to trigger neutrophil transmigration during acute lung injury (ALI). May regulate optic nerve head astrocyte migration. Probably involved in mitotic cytoskeletal regulation. Regulates tight junction probably by modulating ZO-1 exchange in the perijunctional actomyosin ring. Mediates burn-induced microvascular barrier injury; triggers endothelial contraction in the development of microvascular hyperpermeability by phosphorylating MLC. Essential for intestinal barrier dysfunction. Mediates Giardia spp.-mediated reduced epithelial barrier function during giardiasis intestinal infection via reorganization of cytoskeletal F-actin and tight junctional ZO-1. Necessary for hypotonicity-induced Ca(2+) entry and subsequent activation of volume-sensitive organic osmolyte/anion channels (VSOAC) in cervical cancer cells.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

>sp|P29294|MYLK_RABIT Myosin light chain kinase, smooth muscle OS=Oryctolagus cuniculus GN=MYLK PE=1 SV=2

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 99/186 (53%), Gaps = 6/186 (3%)

Query: 157 EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 216
           ++ E E  YRT      V T  K ++D YD  + LG G  G V+  VE+ +G+ +A K  
Sbjct: 673 DEKEPEVDYRTVT----VNTEQK-VSDFYDIEERLGSGKFGQVFRLVEKKTGKIWAGKFF 727

Query: 217 TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY 276
                + K     E+ IMN L H  LV+  D++E K +  ++ E+  GGEL   +  + +
Sbjct: 728 KAYSAKEKENIPAEIGIMNCLHHPKLVQCVDAFEEKANIVMVLEIVSGGELFERIIDEDF 787

Query: 277 -YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
             TE +   Y+RQ+  G++Y+H+  I HL L P +++  +  G  + L DFGL+RR+ + 
Sbjct: 788 ELTERECIKYMRQISEGVEYIHKQGIVHLDLKPENIMCVNKTGTRIKLIDFGLARRLENA 847

Query: 336 GKLNPL 341
           G L  L
Sbjct: 848 GSLKVL 853

Calcium/calmodulin-dependent myosin light chain kinase implicated in smooth muscle contraction via phosphorylation of myosin light chains (MLC). Also regulates actin-myosin interaction through a non-kinase activty. Phosphorylates PTK2B/PYK2 and myosin light-chains. Involved in the inflammatory response (e.g. apoptosis, vascular permeability, leukocyte diapedesis), cell motility and morphology, airway hyperreactivity and other activities relevant to asthma. Required for tonic airway smooth muscle contraction that is necessary for physiological and asthmatic airway resistance. Necessary for gastrointestinal motility. Implicated in the regulation of endothelial as well as vascular permeability, probably via the regulation of cytoskeletal rearrangements. In the nervous system it has been shown to control the growth initiation of astrocytic processes in culture and to participate in transmitter release at synapses formed between cultured sympathetic ganglion cells. Critical participant in signaling sequences that result in fibroblast apoptosis. Plays a role in the regulation of epithelial cell survival. Required for epithelial wound healing, especially during actomyosin ring contraction during purse-string wound closure. Mediates RhoA-dependent membrane blebbing. Triggers TRPC5 channel activity in a calcium-dependent signaling, by inducing its subcellular localization at the plasma membrane. Promotes cell migration (including tumor cells) and tumor metastasis. PTK2B/PYK2 activation by phosphorylation mediates ITGB2 activation and is thus essential to trigger neutrophil transmigration during acute lung injury (ALI). May regulate optic nerve head astrocyte migration. Probably involved in mitotic cytoskeletal regulation. Regulates tight junction probably by modulating ZO-1 exchange in the perijunctional actomyosin ring. Mediates burn-induced microvascular barrier injury; triggers endothelial contraction in the development of microvascular hyperpermeability by phosphorylating MLC. Essential for intestinal barrier dysfunction. Mediates Giardia spp.-mediated reduced epithelial barrier function during giardiasis intestinal infection via reorganization of cytoskeletal F-actin and tight junctional ZO-1. Necessary for hypotonicity-induced Ca(2+) entry and subsequent activation of volume-sensitive organic osmolyte/anion channels (VSOAC) in cervical cancer cells.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q32MK0|MYLK3_HUMAN Myosin light chain kinase 3 OS=Homo sapiens GN=MYLK3 PE=2 SV=3

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 98/171 (57%), Gaps = 3/171 (1%)

Query: 172 RQVKTRTKPITDAYDFGDE--LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
           R V  +   I+  Y+      LG G  G V+   E+S+G   AAK++  K  + +   KN
Sbjct: 500 RVVSVKETSISAGYEVCQHEVLGGGRFGQVHRCTEKSTGLPLAAKIIKVKSAKDREDVKN 559

Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYY-TEYDIAHYIRQ 288
           E++IMNQL H NL++L+D++E+K S T++ E   GGEL   +T + Y+ TE D+  + RQ
Sbjct: 560 EINIMNQLSHVNLIQLYDAFESKHSCTLVMEYVDGGELFDRITDEKYHLTELDVVLFTRQ 619

Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
           +  G+ Y+H+  I HL L P ++L  +  G  + + DFGL+RR     KL 
Sbjct: 620 ICEGVHYLHQHYILHLDLKPENILCVNQTGHQIKIIDFGLARRYKPREKLK 670

May play a role in smooth muscle contraction.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q5RDG7|MYLK3_PONAB Myosin light chain kinase 3 OS=Pongo abelii GN=MYLK3 PE=2 SV=3

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 98/171 (57%), Gaps = 3/171 (1%)

Query: 172 RQVKTRTKPITDAYDFGDE--LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
           R V  +   I+  Y+      LG G  G V+   E+S+G   AAK++  K  + +   KN
Sbjct: 500 RLVSVKETSISAGYEVCQHEVLGGGRFGQVHRCTEKSTGLPLAAKIIKVKSAKDREDVKN 559

Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYY-TEYDIAHYIRQ 288
           E++IMNQL H NL++L+D++E+K S T++ E   GGEL   +T + Y+ TE D+  + RQ
Sbjct: 560 EINIMNQLSHVNLIQLYDAFESKHSCTLVMEYVDGGELFDRITDEKYHLTELDVVLFTRQ 619

Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
           +  G+ Y+H+  I HL L P ++L  +  G  + + DFGL+RR     KL 
Sbjct: 620 ICEGVHYLHQHYILHLDLKPENILCVNQTGHQIKIIDFGLARRYKPREKLK 670

May play a role in smooth muscle contraction.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q15746|MYLK_HUMAN Myosin light chain kinase, smooth muscle OS=Homo sapiens GN=MYLK PE=1 SV=4

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 99/186 (53%), Gaps = 6/186 (3%)

Query: 157  EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 216
            ++ E E  YRT      + T  K ++D YD  + LG G  G V+  VE+ + + +A K  
Sbjct: 1441 DEKEPEVDYRTVT----INTEQK-VSDFYDIEERLGSGKFGQVFRLVEKKTRKVWAGKFF 1495

Query: 217  TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY 276
                 + K   + E+ IMN L H  LV+  D++E K +  ++ E+  GGEL   +  + +
Sbjct: 1496 KAYSAKEKENIRQEISIMNCLHHPKLVQCVDAFEEKANIVMVLEIVSGGELFERIIDEDF 1555

Query: 277  -YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
              TE +   Y+RQ+  G++Y+H+  I HL L P +++  +  G  + L DFGL+RR+ + 
Sbjct: 1556 ELTERECIKYMRQISEGVEYIHKQGIVHLDLKPENIMCVNKTGTRIKLIDFGLARRLENA 1615

Query: 336  GKLNPL 341
            G L  L
Sbjct: 1616 GSLKVL 1621

Calcium/calmodulin-dependent myosin light chain kinase implicated in smooth muscle contraction via phosphorylation of myosin light chains (MLC). Also regulates actin-myosin interaction through a non-kinase activty. Phosphorylates PTK2B/PYK2 and myosin light-chains. Involved in the inflammatory response (e.g. apoptosis, vascular permeability, leukocyte diapedesis), cell motility and morphology, airway hyperreactivity and other activities relevant to asthma. Required for tonic airway smooth muscle contraction that is necessary for physiological and asthmatic airway resistance. Necessary for gastrointestinal motility. Implicated in the regulation of endothelial as well as vascular permeability, probably via the regulation of cytoskeletal rearrangements. In the nervous system it has been shown to control the growth initiation of astrocytic processes in culture and to participate in transmitter release at synapses formed between cultured sympathetic ganglion cells. Critical participant in signaling sequences that result in fibroblast apoptosis. Plays a role in the regulation of epithelial cell survival. Required for epithelial wound healing, especially during actomyosin ring contraction during purse-string wound closure. Mediates RhoA-dependent membrane blebbing. Triggers TRPC5 channel activity in a calcium-dependent signaling, by inducing its subcellular localization at the plasma membrane. Promotes cell migration (including tumor cells) and tumor metastasis. PTK2B/PYK2 activation by phosphorylation mediates ITGB2 activation and is thus essential to trigger neutrophil transmigration during acute lung injury (ALI). May regulate optic nerve head astrocyte migration. Probably involved in mitotic cytoskeletal regulation. Regulates tight junction probably by modulating ZO-1 exchange in the perijunctional actomyosin ring. Mediates burn-induced microvascular barrier injury; triggers endothelial contraction in the development of microvascular hyperpermeability by phosphorylating MLC. Essential for intestinal barrier dysfunction. Mediates Giardia spp.-mediated reduced epithelial barrier function during giardiasis intestinal infection via reorganization of cytoskeletal F-actin and tight junctional ZO-1. Necessary for hypotonicity-induced Ca(2+) entry and subsequent activation of volume-sensitive organic osmolyte/anion channels (VSOAC) in cervical cancer cells. Responsible for high proliferative ability of breast cancer cells through anti-apoptosis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	1310
340713883	5692	PREDICTED: hypothetical protein LOC10064	0.249	0.057	0.422	8e-74
350418885	5683	PREDICTED: hypothetical protein LOC10074	0.249	0.057	0.420	4e-73
332020158	5681	Muscle M-line assembly protein unc-89 [A	0.135	0.031	0.637	3e-64
322795623	542	hypothetical protein SINV_01871 [Solenop	0.283	0.686	0.385	8e-64
195430902	4238	GK21935 [Drosophila willistoni] gi|19415	0.241	0.074	0.394	1e-61
307168125	5829	Muscle M-line assembly protein unc-89 [C	0.135	0.030	0.610	1e-61
307213781	4410	Muscle M-line assembly protein unc-89 [H	0.133	0.039	0.620	2e-61
328781653	5651	PREDICTED: hypothetical protein LOC40883	0.153	0.035	0.598	7e-61
321472492	3812	hypothetical protein DAPPUDRAFT_315830 [	0.154	0.053	0.562	3e-60
383849519	5668	PREDICTED: uncharacterized protein LOC10	0.133	0.030	0.606	5e-60

>gi|340713883|ref|XP_003395464.1| PREDICTED: hypothetical protein LOC100649328 [Bombus terrestris]

 Score =  285 bits (730), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 167/395 (42%), Positives = 227/395 (57%), Gaps = 68/395 (17%)

Query: 747  VKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPD 806
             K WE+ +  R P ID ++ ++KSESHYQNGPDTYLLQLRD DFPVRLREY+KVA  R  
Sbjct: 4989 AKPWENQIATREP-IDTEIGIIKSESHYQNGPDTYLLQLRDTDFPVRLREYMKVACNR-- 5045

Query: 807  LRLSTGFNCLDTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRR 866
               S GF+   T E+   DW+ P+IRERRRFTD+MDEEIDDERR RI++YGA D +TLRR
Sbjct: 5046 ---SPGFSRTITEES--FDWRTPIIRERRRFTDIMDEEIDDERRARISRYGA-DNFTLRR 5099

Query: 867  LRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQ 926
            L+HE+GTR +++ EA+A+IES+++GH PFFREKP   P+  G   ++ CLAVG PKPVIQ
Sbjct: 5100 LKHELGTRLDSYAEAEAMIESKKEGHLPFFREKPQIKPMEEGMPAQLACLAVGSPKPVIQ 5159

Query: 927  WFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQ 986
            W+K          ++I  +++    VT   DG   L +      +I    +V  +     
Sbjct: 5160 WYKND--------MMIQESNR--VKVTEDQDGRSILSFNPTKEHDIGSYKIVARN----- 5204

Query: 987  VKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA 1046
                 LG T   T+L   + P+   +PE               +DV    +L        
Sbjct: 5205 ----SLGQTVVRTRLVEAVVPLGPDSPEL--------------SDVSDTEILLR------ 5240

Query: 1047 SPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWH 1106
                   +P+   N   + Y  +Y   +                VDWI +A+NIDHEF+ 
Sbjct: 5241 -----WKQPKYDGNSPVLCYNLQYKLGD---------------SVDWIDIASNIDHEFYM 5280

Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTK 1141
            ++DL  +T+Y FRL+A+N +GWSEKGIPS L KT+
Sbjct: 5281 IRDLTPDTSYNFRLAARNRVGWSEKGIPSKLIKTR 5315

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350418885|ref|XP_003492000.1| PREDICTED: hypothetical protein LOC100744578 [Bombus impatiens]

 Score =  283 bits (724), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 166/395 (42%), Positives = 225/395 (56%), Gaps = 68/395 (17%)

Query: 747  VKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPD 806
             K WE+ +  R P ID ++ ++KSESHYQNGPDTYLLQLRD DFPVRLREY+KVA  R  
Sbjct: 4980 AKPWENQIATREP-IDTEIGIIKSESHYQNGPDTYLLQLRDTDFPVRLREYMKVACNR-- 5036

Query: 807  LRLSTGFNCLDTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRR 866
               S GF+   T E+   DW+ P+IRERRRFTD+MDEEIDDERR RI++YG  D +TLRR
Sbjct: 5037 ---SPGFSRTITEES--FDWRTPIIRERRRFTDIMDEEIDDERRARISRYGT-DNFTLRR 5090

Query: 867  LRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQ 926
            L+HE+GTR +++ EA+A+IES+++GH PFFREKP   P+  G   ++ CLAVG PKPVIQ
Sbjct: 5091 LKHELGTRLDSYAEAEAMIESKKEGHLPFFREKPQIQPMEEGMPAQLACLAVGSPKPVIQ 5150

Query: 927  WFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQ 986
            W+K          ++I  +++    VT   DG   L +      +I    +V  +     
Sbjct: 5151 WYKND--------MMIQESNR--VKVTEDQDGRSILSFNPTKEHDIGSYKIVARN----- 5195

Query: 987  VKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA 1046
                 LG T   T+L   + P+   +PE               +DV    +L        
Sbjct: 5196 ----SLGQTVVRTRLVEAVVPLGPDSPEL--------------SDVSDTEILLR------ 5231

Query: 1047 SPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWH 1106
                   +P    N   + Y  +Y   +                VDWI +A+NIDHEF+ 
Sbjct: 5232 -----WKQPRYDGNSPVLCYNLQYKLGD---------------SVDWIDIASNIDHEFYM 5271

Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTK 1141
            ++DL  +T+Y FRL+A+N +GWSEKGIPS L KT+
Sbjct: 5272 IRDLTPDTSYNFRLAARNRVGWSEKGIPSKLIKTR 5306

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020158|gb|EGI60602.1| Muscle M-line assembly protein unc-89 [Acromyrmex echinatior]

 Score =  254 bits (648), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 118/185 (63%), Positives = 148/185 (80%), Gaps = 7/185 (3%)

Query: 745  RDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTR 804
            R  +TWE+ +P+R P ID ++ ++KSESHYQNGPDTYLLQLRD DFPVRLREY+KVA  R
Sbjct: 4973 RSPRTWENQIPSREP-IDTEIGIIKSESHYQNGPDTYLLQLRDTDFPVRLREYMKVACNR 5031

Query: 805  PDLRLSTGFNCLDTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTL 864
                 S GF+   T +NG  DW+AP+IRERRRFTDVMDEEIDDERR RIN+YG+ADT+TL
Sbjct: 5032 -----SPGFSRSATEDNG-FDWRAPIIRERRRFTDVMDEEIDDERRARINRYGSADTFTL 5085

Query: 865  RRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPV 924
            RRL++E+GTR +++ EA+A+IES++DG +PFFREKP   P+  G    + CLAVG PKP+
Sbjct: 5086 RRLKNELGTRLDSYAEAEAMIESKKDGQSPFFREKPQICPIEEGKPAHLTCLAVGNPKPL 5145

Query: 925  IQWFK 929
            IQWFK
Sbjct: 5146 IQWFK 5150

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322795623|gb|EFZ18302.1| hypothetical protein SINV_01871 [Solenopsis invicta]

 Score =  252 bits (644), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 166/431 (38%), Positives = 232/431 (53%), Gaps = 59/431 (13%)

Query: 509 GDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHT 568
           GDLL++H GG  L + DFGL+RRI+S  +L  L YG  +Y   V P + + + ++ A   
Sbjct: 2   GDLLISHAGGDDLKIGDFGLTRRISS-ARLMTLLYGMPEY---VAPEVTNNEGVSYAADM 57

Query: 569 PTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK 628
            ++      L   +  SP   + +  T     + +I  GK+    +    +N        
Sbjct: 58  WSVGIITYILLSGI--SPFRGANDRET-----LKKIREGKWDFDDRWKNISNEAQDFIRN 110

Query: 629 LFEYSHDTLHQVNTEF--------DNLRSLRHERIASLLEAYK-PSTTASNIAVLVMEKL 679
           L  Y+ D    V            DNL S          E Y+ PS    N   L  +  
Sbjct: 111 LLVYNVDKRMDVRAALAHPWFNYIDNLPS----------EPYRIPSENLKNYYKLYRDWY 160

Query: 680 QGADVLS-YLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQS 738
             A   + Y  S+ E    + + ++      +  +     + ++ K R PRT        
Sbjct: 161 SNASCRTWYRRSKLETAFDDPSRMVYPPGHKFTPE--PDRSHSSLKKRSPRT-------- 210

Query: 739 ANTANLRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYI 798
                      WE+ +P+R P ID ++ ++ SESHYQNGPDTYLLQLRD DFPVRLREY+
Sbjct: 211 -----------WENQIPSREP-IDTEIGIITSESHYQNGPDTYLLQLRDTDFPVRLREYM 258

Query: 799 KVASTRPDLRLSTGFNCLDTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGA 858
           KVA  R     S GF+    +E+   DW+ P+IRERRRFTDVMDEEIDDERR RIN+YG+
Sbjct: 259 KVACDR-----SPGFS-RSITEDNSFDWRTPIIRERRRFTDVMDEEIDDERRARINRYGS 312

Query: 859 ADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAV 918
           ADT+TLRRL++E+GTR +++ EA+A++ES++DG  PFFREKP   P+  G    + CLAV
Sbjct: 313 ADTFTLRRLKNELGTRLDSYAEAEAMMESKKDGQLPFFREKPQICPIEEGKPAHLTCLAV 372

Query: 919 GEPKPVIQWFK 929
           G PKP+IQWFK
Sbjct: 373 GNPKPLIQWFK 383

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195430902|ref|XP_002063487.1| GK21935 [Drosophila willistoni] gi|194159572|gb|EDW74473.1| GK21935 [Drosophila willistoni]

 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/388 (39%), Positives = 207/388 (53%), Gaps = 72/388 (18%)

Query: 762  DYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTR-PDLRLSTGFNCLDTSE 820
            DY+L +++SESHYQ GPDTYLLQLRDV+FPVRLREY+KVA  R P   L           
Sbjct: 3551 DYELGLIQSESHYQYGPDTYLLQLRDVNFPVRLREYMKVAHRRSPSFAL----------- 3599

Query: 821  NGHLDWKAPVIRERRRFTDVMDEEIDDER-RNRINKYGAADTYTLRRLRHEIGTRPEAHV 879
            N  +DW  PVIRERRRFTD+MDEEIDDER R+RI+ Y A D+Y++RRLR E+G R + + 
Sbjct: 3600 NDSVDWSLPVIRERRRFTDIMDEEIDDERTRSRISTYAANDSYSIRRLRTELGPRLDEYT 3659

Query: 880  EADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLP 939
            EADA+IES+RDG+ PFFREKP TI +       + C AVG+PKP +QWFK          
Sbjct: 3660 EADAMIESQRDGYPPFFREKPQTIAITENQPAHIHCFAVGDPKPCVQWFKND-------- 3711

Query: 940  IVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT 999
            +V+  + +    +T   DG   L +    H +I    V  A  R+           Q VT
Sbjct: 3712 MVLSESKR--IKITYDEDGRSILRFEPAVHFDI---GVYKAVARN--------KVGQTVT 3758

Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
            +   ++               L + P  P+   +          SG        +P    
Sbjct: 3759 RCRIVV-------------ATLPDAPDSPEISAY----------SGTEILLRWKQPRDDG 3795

Query: 1060 NVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFR 1119
            +   + Y  +Y  K +  +A             W T+A+NIDHEF+ + DL+  TNY FR
Sbjct: 3796 HSTVLCYSLQY--KMVNCDA-------------WTTVADNIDHEFYLLHDLQPNTNYHFR 3840

Query: 1120 LSAKNVIGWSEKGIPSALFKTKEQAPEV 1147
            L+++N IGWSE GIP +       AP++
Sbjct: 3841 LASRNRIGWSEMGIPVSGSTVAGDAPKI 3868

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307168125|gb|EFN61404.1| Muscle M-line assembly protein unc-89 [Camponotus floridanus]

 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 113/185 (61%), Positives = 145/185 (78%), Gaps = 7/185 (3%)

Query: 745  RDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTR 804
            R  +TWE+ +P+R P ID ++ ++ +ESHYQNGPDTYLLQLRD DFPVRLREY+KVA  R
Sbjct: 5119 RSPRTWENQIPSREP-IDTEIGIITNESHYQNGPDTYLLQLRDTDFPVRLREYMKVACNR 5177

Query: 805  PDLRLSTGFNCLDTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTL 864
                 S GF+    +E+ + DW+ P+IRERRRFTDVMDEEIDDERR RIN+YG+ADTYTL
Sbjct: 5178 -----SPGFS-RSITEDNNFDWRTPIIRERRRFTDVMDEEIDDERRERINRYGSADTYTL 5231

Query: 865  RRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPV 924
            RRLR+E+GTR +++ EA+A+I S+++G +PFFREKP   P+  G    + CLAVG PKP+
Sbjct: 5232 RRLRNELGTRLDSYAEAEAIIGSKKEGQSPFFREKPQICPIEEGKPAHLACLAVGNPKPL 5291

Query: 925  IQWFK 929
            IQWFK
Sbjct: 5292 IQWFK 5296

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307213781|gb|EFN89117.1| Muscle M-line assembly protein unc-89 [Harpegnathos saltator]

 Score =  244 bits (624), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 113/182 (62%), Positives = 144/182 (79%), Gaps = 7/182 (3%)

Query: 748  KTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDL 807
            +TWE+ VP+R P ID ++ ++KSESHYQNGPDTYLLQLRD DFPVRLREY+KVA  R   
Sbjct: 3705 RTWENQVPSREP-IDTEIGIIKSESHYQNGPDTYLLQLRDTDFPVRLREYMKVACDR--- 3760

Query: 808  RLSTGFNCLDTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRL 867
              S GF+    +E+   DW+AP+IRERRRFTDVMDEEIDDERR RIN+YG+ADTYTLRRL
Sbjct: 3761 --SPGFS-RSIAEDNSFDWRAPIIRERRRFTDVMDEEIDDERRARINRYGSADTYTLRRL 3817

Query: 868  RHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQW 927
            ++E+GTR +++ EA+A+I S+++G  PFFREKP   P+  G   ++ C  VG+PKP+IQW
Sbjct: 3818 KNELGTRLDSYAEAEAMIGSKKEGQPPFFREKPQICPIEEGKPAQLVCFVVGDPKPLIQW 3877

Query: 928  FK 929
            FK
Sbjct: 3878 FK 3879

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328781653|ref|XP_392361.4| PREDICTED: hypothetical protein LOC408830 isoform 1 [Apis mellifera]

 Score =  243 bits (619), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 122/204 (59%), Positives = 151/204 (74%), Gaps = 3/204 (1%)

Query: 141  GRGVTGTISHSVTVHVEDNENEYSYRTYARGRQVK-TRTKPITDAYDFGDELGRGVTGIV 199
             R V G+IS SV +HVE+NE+EY YRTY R  +VK  R KP+ + YD GDELGRG  G+ 
Sbjct: 4572 ARNVAGSISCSVMLHVEENEHEYGYRTYRRKLEVKPCRDKPLNELYDLGDELGRGTQGVT 4631

Query: 200  YHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS 259
            YHAVERS+G+NYAAKVM GKG + K    NE+++MN L HR L+RLHD+YET  S T++ 
Sbjct: 4632 YHAVERSTGKNYAAKVMHGKG-ELKPYMHNEIEVMNNLNHRKLLRLHDAYETDTSVTLVI 4690

Query: 260  ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 319
            ELA GGEL+ +LT+Q+YYTE +IA YIRQLL GL+YMH    AHLGLT GDLL++H GG 
Sbjct: 4691 ELAAGGELVDTLTKQAYYTEAEIAGYIRQLLWGLEYMHSNQYAHLGLTLGDLLISHTGGD 4750

Query: 320  HLLLTDFGLSRRITSFGKLNPLEY 343
             L + DFGL+RRI S  K+  L Y
Sbjct: 4751 DLKICDFGLARRI-SHAKMMTLLY 4773

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321472492|gb|EFX83462.1| hypothetical protein DAPPUDRAFT_315830 [Daphnia pulex]

 Score =  241 bits (614), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 117/208 (56%), Positives = 150/208 (72%), Gaps = 5/208 (2%)

Query: 140  LGRGVTGTISHSVTVHVEDNENEYSYRTYARGRQVKTR----TKPITDAYDFGDELGRGV 195
            + R   G +S S  +HVEDNE+E++YRTY RGR VK +     +   D YD GDELGRG 
Sbjct: 2725 VARNPAGAVSASAMIHVEDNEDEFAYRTYHRGRNVKAKQVDNNRIFGDYYDLGDELGRGT 2784

Query: 196  TGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSF 255
             G+ YH+VERS+GR+ AAK+MTG G + +S    ELD+MNQL H+ LVRL D+YETKDS 
Sbjct: 2785 QGVTYHSVERSTGRSLAAKIMTGTGPELRSRMTGELDMMNQLSHQRLVRLIDAYETKDSL 2844

Query: 256  TIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH 315
            T++SELAGGG+L+ ++TR+ + TE DIA+YIRQ+L GL +MH   IAHLGLTPGDL +  
Sbjct: 2845 TLVSELAGGGDLVDAVTRRPHITESDIAYYIRQVLEGLGHMHSHGIAHLGLTPGDLFLTR 2904

Query: 316  PGGRHLLLTDFGLSRRITSFGKLNPLEY 343
            P G  L + DFGL+RRI S  KL  L+Y
Sbjct: 2905 PDGDELKIGDFGLARRIYS-NKLASLDY 2931

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383849519|ref|XP_003700392.1| PREDICTED: uncharacterized protein LOC100881888 [Megachile rotundata]

 Score =  240 bits (612), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 111/183 (60%), Positives = 140/183 (76%), Gaps = 8/183 (4%)

Query: 747  VKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPD 806
             K W+  +P R P ID ++ ++KSESHYQNGPDTYLLQLRD DFPVRLREY+KVA  R  
Sbjct: 4963 AKPWDSQIPTREP-IDTEIGIIKSESHYQNGPDTYLLQLRDTDFPVRLREYMKVACNR-- 5019

Query: 807  LRLSTGFNCLDTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRR 866
               S GF+     EN   DW+ P+IRERRRFTDVMDEEIDDERR RIN+YG+ D +TLRR
Sbjct: 5020 ---SPGFSRSIADEN--FDWRTPIIRERRRFTDVMDEEIDDERRARINRYGSPDVFTLRR 5074

Query: 867  LRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQ 926
            L+HE+GTR +++ EA+A++ES+++GH PFFREKP   P+  G   ++ CLAVG PKP+IQ
Sbjct: 5075 LKHELGTRLDSYAEAEAMLESKKEGHPPFFREKPQIRPIEEGKPAQLVCLAVGNPKPLIQ 5134

Query: 927  WFK 929
            W+K
Sbjct: 5135 WYK 5137

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	1310
FB|FBgn0053519	4218	Unc-89 "Unc-89" [Drosophila me	0.165	0.051	0.490	2.6e-171
ZFIN|ZDB-GENE-030131-3230	2995	speg "SPEG complex locus" [Dan	0.101	0.044	0.338	6.9e-35
RGD|2124	3259	Speg "SPEG complex locus" [Rat	0.129	0.052	0.347	3e-42
UNIPROTKB|G3N022	3281	SPEG "Uncharacterized protein"	0.112	0.045	0.350	6.1e-36
MGI|MGI:109282	3262	Speg "SPEG complex locus" [Mus	0.129	0.052	0.342	4.3e-41
UNIPROTKB|E2R2D8	3274	SPEG "Uncharacterized protein"	0.129	0.051	0.336	1.2e-39
UNIPROTKB|F6X4X4	3272	SPEG "Uncharacterized protein"	0.129	0.051	0.336	1.6e-39
UNIPROTKB|Q15772	3267	SPEG "Striated muscle preferen	0.129	0.052	0.331	2e-39
FB|FBgn0005666	8933	bt "bent" [Drosophila melanoga	0.153	0.022	0.328	7.3e-38
ZFIN|ZDB-GENE-040812-4	2009	obscn "obscurin, cytoskeletal	0.123	0.080	0.292	7.3e-37

FB|FBgn0053519 Unc-89 "Unc-89" [Drosophila melanogaster (taxid:7227)]

 Score = 539 (194.8 bits), Expect = 2.6e-171, Sum P(6) = 2.6e-171
 Identities = 109/222 (49%), Positives = 153/222 (68%)

Query:   142 RGVTGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYH 201
             R + G+IS SVTVH+E+NE++Y Y+TY R   V+++     D YD GDELGRG  GI YH
Sbjct:  3143 RNIAGSISTSVTVHIEENEDQYIYKTYGRHPYVRSKQLRYQDKYDIGDELGRGTQGITYH 3202

Query:   202 AVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL 261
             AVERSSG NYAAK+M G+  + +    NEL++MN   H+NL+R +D+Y+T  S T+I EL
Sbjct:  3203 AVERSSGDNYAAKIMYGRP-ELRPFMLNELEMMNTFNHKNLIRPYDAYDTDRSVTLIMEL 3261

Query:   262 AGGGELLH-SLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 320
             A GGEL+  +L R+ YYTE DIAHYIRQ L GL++MH + + H+GLT  DLL++  GG  
Sbjct:  3262 AAGGELVRDNLLRRDYYTERDIAHYIRQTLWGLEHMHEMGVGHMGLTIKDLLISVVGGDI 3321

Query:   321 LLLTDFGLSRRITSFGKLNPLEYDV-RYVR-QALRHPWLNFA 360
             + ++DFGLSR+I     L+ L+Y +  +V  + +    +NF+
Sbjct:  3322 IKVSDFGLSRKINRHN-LSTLDYGMPEFVSPEVVNKEGVNFS 3362

GO:0005524 "ATP binding" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IKR

GO:0004672 "protein kinase activity" evidence=IKR

GO:0045214 "sarcomere organization" evidence=IMP

GO:0007527 "adult somatic muscle development" evidence=IMP

GO:0031430 "M band" evidence=IDA

ZFIN|ZDB-GENE-030131-3230 speg "SPEG complex locus" [Danio rerio (taxid:7955)]

 Score = 245 (91.3 bits), Expect = 6.9e-35, Sum P(6) = 6.9e-35
 Identities = 46/136 (33%), Positives = 82/136 (60%)

Query:   952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
             +  +L+G++YLH   + HL+++P+N++MA  ++ Q+++ D G   +V     L      P
Sbjct:  1353 IRQLLEGIEYLHQNDIIHLDLKPENILMADQKTDQIRICDFGNALKVKPNEELYCKYGIP 1412

Query:  1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY- 1070
               EF APE++ + PI   TD+W  GV+ Y+ L+G SPF G+++ +T  N+      FE  
Sbjct:  1413 --EFIAPEIVNQSPISKSTDIWPVGVITYLCLTGVSPFAGENDRDTLLNIRNYNVAFEES 1470

Query:  1071 LFKELTQEATRFLMLI 1086
             +FK+L +EA  F++ +
Sbjct:  1471 MFKDLCREAKGFIIKV 1486

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030018 "Z disc" evidence=NAS

GO:0007517 "muscle organ development" evidence=ISS

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

RGD|2124 Speg "SPEG complex locus" [Rattus norvegicus (taxid:10116)]

 Score = 229 (85.7 bits), Expect = 3.0e-42, Sum P(4) = 3.0e-42
 Identities = 64/184 (34%), Positives = 96/184 (52%)

Query:   952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK--LGTLIHPIN 1009
             V  +L GL YLH R + HL+I+PDN+++A+  ++  K++D G  Q      L  L H   
Sbjct:  3058 VVQLLQGLDYLHGRHVLHLDIKPDNLLLAADNAL--KIVDFGSAQPYNPQALKPLGH--R 3113

Query:  1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
             T   EF APE++  +PI   TD+W AGVL Y++LSG SPF      ET   +   R+   
Sbjct:  3114 TGTLEFMAPEMVRGDPIGSATDIWGAGVLTYIMLSGYSPFYEPDPQETEARIVGGRFDAF 3173

Query:  1070 YLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFW----HVKDLKRETNYTFRLSA-K 1123
              L+   +Q AT FL  +   H     +L + + H  W    ++  L+R+T  TF  +  K
Sbjct:  3174 QLYPNTSQSATLFLRKVLSVHPWSRPSLQDCLAHP-WLQDAYLMKLRRQT-LTFTTNRLK 3231

Query:  1124 NVIG 1127
               +G
Sbjct:  3232 EFLG 3235

GO:0001701 "in utero embryonic development" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0042692 "muscle cell differentiation" evidence=IEP

GO:0055013 "cardiac muscle cell development" evidence=ISO

GO:0060541 "respiratory system development" evidence=ISO

GO:0072358 "cardiovascular system development" evidence=ISO

UNIPROTKB|G3N022 SPEG "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 226 (84.6 bits), Expect = 6.1e-36, Sum P(3) = 6.1e-36
 Identities = 53/151 (35%), Positives = 82/151 (54%)

Query:   177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQ 236
             R  P    Y F +E  RG  G+V    E ++GR + AK++       + + + E +++  
Sbjct:  2972 RQGPPQKPYTFLEEKARGRFGVVRACRENATGRTFVAKIVPYAAEGKRQVLQ-EYEVLRT 3030

Query:   237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
             L H  L+ LH++Y T     +I+E  G  ELL  L+ +  Y+E D+A Y+ QLL GLDY+
Sbjct:  3031 LHHERLMALHEAYITPRYLVLIAESCGNRELLCGLSDRFRYSEDDVATYVVQLLQGLDYL 3090

Query:   297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
             H   + HL + P +LL+A P    L + DFG
Sbjct:  3091 HGRHVLHLDIKPDNLLLA-PDNA-LKIVDFG 3119

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

MGI|MGI:109282 Speg "SPEG complex locus" [Mus musculus (taxid:10090)]

 Score = 224 (83.9 bits), Expect = 4.3e-41, Sum P(4) = 4.3e-41
 Identities = 63/184 (34%), Positives = 95/184 (51%)

Query:   952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK--LGTLIHPIN 1009
             V  +L GL YLH   + HL+I+PDN+++A+  ++  K++D G  Q      L  L H   
Sbjct:  3061 VVQLLQGLDYLHGHHVLHLDIKPDNLLLAADNAL--KIVDFGSAQPYNPQALKPLGH--R 3116

Query:  1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
             T   EF APE++  +PI   TD+W AGVL Y++LSG SPF      ET   +   R+   
Sbjct:  3117 TGTLEFMAPEMVKGDPIGSATDIWGAGVLTYIMLSGYSPFYEPDPQETEARIVGGRFDAF 3176

Query:  1070 YLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFW----HVKDLKRETNYTFRLSA-K 1123
              L+   +Q AT FL  +   H     +L + + H  W    ++  L+R+T  TF  +  K
Sbjct:  3177 QLYPNTSQSATLFLRKVLSVHPWSRPSLQDCLAHP-WLQDAYLMKLRRQT-LTFTTNRLK 3234

Query:  1124 NVIG 1127
               +G
Sbjct:  3235 EFLG 3238

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IMP

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0055013 "cardiac muscle cell development" evidence=IMP

GO:0060541 "respiratory system development" evidence=IMP

GO:0072358 "cardiovascular system development" evidence=IMP

UNIPROTKB|E2R2D8 SPEG "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 228 (85.3 bits), Expect = 1.2e-39, Sum P(5) = 1.2e-39
 Identities = 62/184 (33%), Positives = 95/184 (51%)

Query:   952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN-- 1009
             V  +L GL YLH R + HL+I+PDN+++A   ++  K++D G  Q        + P+   
Sbjct:  3073 VVQLLQGLDYLHGRHVLHLDIKPDNLLLAPDNAL--KIVDFGSAQPYNPQA--LRPLGHR 3128

Query:  1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
             T   EF APE++  +PI   TD+W AGVL Y++LSG SPF      ET   +   R+   
Sbjct:  3129 TGTLEFMAPEMVKGDPIGSATDIWGAGVLTYIMLSGRSPFYEPDPQETEARIVGGRFDAF 3188

Query:  1070 YLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFW----HVKDLKRETNYTFRLSA-K 1123
              L+   +Q AT FL  +   H     +L + + H  W    ++  L+R+T  TF  +  K
Sbjct:  3189 QLYPNTSQSATLFLRKVLSVHPWSRPSLQDCLAHP-WLQDAYLMKLRRQT-LTFTTNRLK 3246

Query:  1124 NVIG 1127
               +G
Sbjct:  3247 EFLG 3250

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F6X4X4 SPEG "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 228 (85.3 bits), Expect = 1.6e-39, Sum P(5) = 1.6e-39
 Identities = 62/184 (33%), Positives = 95/184 (51%)

Query:   952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN-- 1009
             V  +L GL YLH R + HL+I+PDN+++A   ++  K++D G  Q        + P+   
Sbjct:  3071 VVQLLQGLDYLHGRHVLHLDIKPDNLLLAPDNAL--KIVDFGSAQPYNPQA--LRPLGHR 3126

Query:  1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
             T   EF APE++  +PI   TD+W AGVL Y++LSG SPF      ET   +   R+   
Sbjct:  3127 TGTLEFMAPEMVKGDPIGSATDIWGAGVLTYIMLSGRSPFYEPDPQETEARIVGGRFDAF 3186

Query:  1070 YLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFW----HVKDLKRETNYTFRLSA-K 1123
              L+   +Q AT FL  +   H     +L + + H  W    ++  L+R+T  TF  +  K
Sbjct:  3187 QLYPNTSQSATLFLRKVLSVHPWSRPSLQDCLAHP-WLQDAYLMKLRRQT-LTFTTNRLK 3244

Query:  1124 NVIG 1127
               +G
Sbjct:  3245 EFLG 3248

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q15772 SPEG "Striated muscle preferentially expressed protein kinase" [Homo sapiens (taxid:9606)]

 Score = 223 (83.6 bits), Expect = 2.0e-39, Sum P(5) = 2.0e-39
 Identities = 61/184 (33%), Positives = 94/184 (51%)

Query:   952 VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN-- 1009
             +  +L GL YLH   + HL+I+PDN+++A   ++  K++D G  Q        + P+   
Sbjct:  3066 MVQLLQGLDYLHGHHVLHLDIKPDNLLLAPDNAL--KIVDFGSAQPYNPQA--LRPLGHR 3121

Query:  1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
             T   EF APE++  EPI   TD+W AGVL Y++LSG SPF      ET   +   R+   
Sbjct:  3122 TGTLEFMAPEMVKGEPIGSATDIWGAGVLTYIMLSGRSPFYEPDPQETEARIVGGRFDAF 3181

Query:  1070 YLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFW----HVKDLKRETNYTFRLSA-K 1123
              L+   +Q AT FL  +   H     +L + + H  W    ++  L+R+T  TF  +  K
Sbjct:  3182 QLYPNTSQSATLFLRKVLSVHPWSRPSLQDCLAHP-WLQDAYLMKLRRQT-LTFTTNRLK 3239

Query:  1124 NVIG 1127
               +G
Sbjct:  3240 EFLG 3243

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0042692 "muscle cell differentiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0007517 "muscle organ development" evidence=TAS

GO:0008285 "negative regulation of cell proliferation" evidence=TAS

FB|FBgn0005666 bt "bent" [Drosophila melanogaster (taxid:7227)]

 Score = 308 (113.5 bits), Expect = 7.3e-38, Sum P(3) = 7.3e-38
 Identities = 69/210 (32%), Positives = 116/210 (55%)

Query:   126 RTKPITDAYDFGDELGRGVTGTISHSVTVHVEDNENEYSYRTYAR--GRQVKTRTKPITD 183
             + KPI   ++  D  GR + G     V    +D ++ Y +  Y++   + V+   + + D
Sbjct:  7934 KKKPIERKWEI-DANGRKLRGKADGPV----KDYDS-YVFDIYSKFVPQPVEISQQSVYD 7987

Query:   184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLV 243
              YD  +E+G G  G+V+   ERS+G  +AAK +    +  K L + E+DIMNQL H+ L+
Sbjct:  7988 RYDILEEIGTGAFGVVHRCRERSTGNIFAAKFIPVSHSVEKDLIRREIDIMNQLHHQKLI 8047

Query:   244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYY-TEYDIAHYIRQLLSGLDYMHRLSIA 302
              LHD++E  D   +I E   GGEL   +T + Y  TE ++ +Y+RQ+  G+ +MH  +I 
Sbjct:  8048 NLHDAFEDDDEMILILEFLSGGELFERITAEGYVMTEAEVINYMRQICEGIRHMHEQNII 8107

Query:   303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
             HL + P +++       ++ L DFGL+ R+
Sbjct:  8108 HLDIKPENIMCQTRSSTNVKLIDFGLATRL 8137

GO:0005737 "cytoplasm" evidence=ISS

GO:0004687 "myosin light chain kinase activity" evidence=NAS

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;NAS

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0007498 "mesoderm development" evidence=IEP

GO:0005524 "ATP binding" evidence=IEA

GO:0008307 "structural constituent of muscle" evidence=IDA

GO:0030018 "Z disc" evidence=IDA

GO:0045214 "sarcomere organization" evidence=IMP

ZFIN|ZDB-GENE-040812-4 obscn "obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF" [Danio rerio (taxid:7955)]

 Score = 226 (84.6 bits), Expect = 7.3e-37, Sum P(3) = 7.3e-37
 Identities = 48/164 (29%), Positives = 89/164 (54%)

Query:   172 RQVKT-RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNE 230
             R+V+  + + +   YD  +E+GRG  G+V     ++SG  +AAK +  + +     F+ E
Sbjct:   687 REVEFGKRRKLHSVYDVYEEIGRGTFGVVKKVTHKASGECFAAKFLPLRSSTRTRAFQ-E 745

Query:   231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
              D++++L HR L  L D + T+ +  ++ EL     LL  L  +   TE ++  YI+Q+L
Sbjct:   746 RDLLSRLAHRRLACLLDFFSTRRTLVLVVELCSSQSLLDHLFLKGSVTEREVQLYIQQVL 805

Query:   291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
              G+ Y+H ++I HL +   ++L+  P    + + DFG  + + S
Sbjct:   806 EGIGYIHGMNILHLDIKTDNILMVSPTREDIKICDFGFCQEVDS 849

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007517 "muscle organ development" evidence=ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0030018 "Z disc" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	1310
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-39
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	6e-31
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-29
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-23
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-22
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-22
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-21
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-21
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	6e-21
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	8e-20
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	9e-19
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	7e-18
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	6e-16
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	7e-16
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-15
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-15
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-15
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-15
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-15
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-15
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-15
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	9e-15
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	9e-15
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-14
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-14
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-14
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-14
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	4e-14
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	5e-14
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	5e-14
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	6e-14
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-13
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-13
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-13
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-13
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-13
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	4e-13
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	5e-13
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	7e-13
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	9e-13
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	9e-13
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-12
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-12
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-12
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-12
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-12
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-12
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-12
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	4e-12
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	5e-12
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	5e-12
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	7e-12
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	7e-12
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	8e-12
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	8e-12
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	8e-12
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	9e-12
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	9e-12
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-11
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-11
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-11
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	2e-11
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-11
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-11
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	5e-11
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	7e-11
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	8e-11
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	9e-11
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-10
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-10
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-10
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-10
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	2e-10
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-10
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-10
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-10
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-10
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-10
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	3e-10
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	4e-10
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	4e-10
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-10
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	5e-10
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	6e-10
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	6e-10
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	7e-10
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	9e-10
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	9e-10
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-09
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-09
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	1e-09
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	1e-09
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	1e-09
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-09
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	2e-09
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-09
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-09
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-09
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	3e-09
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-09
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	3e-09
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	4e-09
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-09
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-09
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	4e-09
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-09
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	5e-09
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	5e-09
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	5e-09
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	5e-09
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	6e-09
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	6e-09
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	6e-09
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	6e-09
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	8e-09
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	9e-09
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-08
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-08
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-08
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	1e-08
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-08
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-08
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-08
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	1e-08
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	1e-08
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-08
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-08
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-08
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	2e-08
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-08
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-08
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-08
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-08
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-08
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-08
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-08
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-08
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	4e-08
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	4e-08
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	5e-08
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	6e-08
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	6e-08
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	7e-08
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	8e-08
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	8e-08
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	8e-08
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	8e-08
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	8e-08
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	9e-08
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	1e-07
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	1e-07
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	1e-07
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	1e-07
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	1e-07
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-07
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-07
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-07
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-07
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	2e-07
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-07
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-07
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-07
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	2e-07
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-07
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-07
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-07
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-07
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	3e-07
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	3e-07
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	4e-07
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	4e-07
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	4e-07
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-07
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	5e-07
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	5e-07
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	5e-07
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	5e-07
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	5e-07
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	5e-07
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	6e-07
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	6e-07
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	6e-07
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	6e-07
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	8e-07
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	8e-07
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	8e-07
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	8e-07
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	8e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	9e-07
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	9e-07
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-06
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	1e-06
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-06
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	1e-06
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-06
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-06
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-06
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-06
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-06
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-06
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-06
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-06
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-06
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-06
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-06
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	3e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-06
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-06
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	3e-06
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	3e-06
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	3e-06
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	3e-06
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	4e-06
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	4e-06
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	4e-06
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	4e-06
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	4e-06
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	4e-06
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	5e-06
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	5e-06
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	5e-06
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	5e-06
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	5e-06
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	5e-06
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	6e-06
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	6e-06
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	6e-06
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	7e-06
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	7e-06
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	7e-06
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	7e-06
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	8e-06
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	8e-06
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	8e-06
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	8e-06
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	8e-06
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	8e-06
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	9e-06
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	9e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-05
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-05
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	1e-05
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-05
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	1e-05
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	1e-05
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-05
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-05
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-05
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	1e-05
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	1e-05
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-05
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-05
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-05
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-05
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-05
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-05
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-05
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-05
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-05
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-05
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	2e-05
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-05
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	3e-05
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-05
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-05
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	3e-05
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	3e-05
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	4e-05
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	4e-05
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	4e-05
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	4e-05
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	4e-05
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	4e-05
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	4e-05
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	4e-05
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	4e-05
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	4e-05
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	4e-05
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	5e-05
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	5e-05
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	5e-05
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	5e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	5e-05
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	6e-05
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	6e-05
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	6e-05
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	6e-05
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	6e-05
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	6e-05
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	7e-05
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	7e-05
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	8e-05
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	8e-05
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	8e-05
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	8e-05
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	8e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	8e-05
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	8e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	8e-05
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	8e-05
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	8e-05
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	9e-05
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	9e-05
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	9e-05
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-04
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	1e-04
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-04
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-04
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-04
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-04
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	1e-04
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	1e-04
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	1e-04
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-04
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-04
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	1e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-04
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-04
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	1e-04
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	1e-04
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	1e-04
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-04
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-04
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-04
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-04
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-04
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	2e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-04
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-04
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	2e-04
pfam07679	90	pfam07679, I-set, Immunoglobulin I-set domain	2e-04
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-04
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	2e-04
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	2e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-04
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	2e-04
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	3e-04
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	3e-04
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	3e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-04
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	3e-04
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-04
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	3e-04
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	4e-04
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	4e-04
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	4e-04
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	4e-04
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	4e-04
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	4e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	4e-04
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	4e-04
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	4e-04
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	4e-04
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	4e-04
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	5e-04
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	5e-04
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	5e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	5e-04
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	5e-04
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	5e-04
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	5e-04
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	6e-04
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	6e-04
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	6e-04
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	6e-04
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	6e-04
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	6e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	6e-04
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	7e-04
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	7e-04
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	7e-04
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	7e-04
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	7e-04
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	7e-04
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	7e-04
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	7e-04
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	7e-04
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	8e-04
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	8e-04
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	8e-04
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	8e-04
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	0.001
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	0.001
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	0.001
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	0.001
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	0.001
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	0.001
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	0.001
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	0.001
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	0.001
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	0.001
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	0.001
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	0.001
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	0.001
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	0.001
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	0.001
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	0.001
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	0.001
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	0.001
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	0.001
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	0.001
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	0.001
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.001
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	0.001
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	0.001
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	0.001
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	0.002
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	0.002
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	0.002
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	0.002
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	0.002
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	0.002
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	0.002
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	0.002
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	0.002
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	0.002
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	0.002
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	0.002
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	0.002
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	0.002
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	0.002
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	0.002
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	0.002
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	0.003
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	0.003
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	0.003
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	0.003
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	0.003
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	0.003
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	0.003
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	0.003
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	0.003
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	0.003
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	0.003
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	0.004
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	0.004
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	0.004
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	0.004
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	0.004
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	0.004
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	0.004
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	0.004
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	0.004
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	0.004
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	0.004
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	0.004
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	0.004
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	0.004
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	0.004
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	0.004
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	0.004
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  147 bits (373), Expect = 2e-39
 Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 3/158 (1%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLV 243
           Y+  ++LG G  G VY A ++ +G+  A KV+   K  + +     E+ I+ +L H N+V
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
           RL+D +E +D   ++ E   GG+L   L ++   +E +   Y+RQ+LS L+Y+H   I H
Sbjct: 61  RLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVH 120

Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL 341
             L P ++L+   G  H+ L DFGL+R++    KL   
Sbjct: 121 RDLKPENILLDEDG--HVKLADFGLARQLDPGEKLTTF 156

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  122 bits (309), Expect = 6e-31
 Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 4/151 (2%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNL 242
           Y+   +LG G  G VY A  + +G+  A K++    + ++     + E+ I+ +L H N+
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
           VRL D++E KD   ++ E   GG+L   L+R    +E +      Q+L GL+Y+H   I 
Sbjct: 61  VRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGII 120

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           H  L P ++L+   G   + + DFGL++++ 
Sbjct: 121 HRDLKPENILLDENG--VVKIADFGLAKKLL 149

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  115 bits (290), Expect = 7e-29
 Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 3/150 (2%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           LG G  G VY A ++ +G+  A K++     +        E++I+ +L H N+V+L+  +
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYY-TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
           E ++   ++ E   GG L   L       +E +I   + Q+L GL+Y+H   I H  L P
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKP 120

Query: 309 GDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
            ++L+    G  + L DFGLS+ +TS   L
Sbjct: 121 ENILLDSDNG-KVKLADFGLSKLLTSDKSL 149

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  101 bits (253), Expect = 1e-23
 Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 8/150 (5%)

Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVR 244
           G+ LGRG  G VY A+++ +G   A K +   G+   + ++L + E+ I++ L H N+VR
Sbjct: 5   GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEAL-EREIRILSSLQHPNIVR 63

Query: 245 LHDSY--ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
            + S   E K++  I  E   GG L   L +     E  I  Y RQ+L GL Y+H   I 
Sbjct: 64  YYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIV 123

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           H  +   ++LV   G   + L DFG ++R+
Sbjct: 124 HRDIKGANILVDSDG--VVKLADFGCAKRL 151

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 98.8 bits (247), Expect = 2e-22
 Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 6/150 (4%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYK--SLFKNELDIMNQL-CHR 240
           + FG  +G G    V  A E+ + + YA K++  +   + K     K E +++ +L  H 
Sbjct: 3   FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHP 62

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            +++L+ +++ +++   + E A  GELL  + +     E     Y  ++L  L+Y+H   
Sbjct: 63  GIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG 122

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           I H  L P ++L+      H+ +TDFG ++
Sbjct: 123 IIHRDLKPENILLDKDM--HIKITDFGTAK 150

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 96.8 bits (242), Expect = 4e-22
 Identities = 45/149 (30%), Positives = 85/149 (57%), Gaps = 5/149 (3%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLF---KNELDIMNQLCHRNLVRLHD 247
           LG+G  G V    ++ +G+ YA KV+  K    +        E +I++++ H  +V+LH 
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHY 60

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           +++T++   ++ E A GGEL   L+++  ++E     Y  +++  L+Y+H L I +  L 
Sbjct: 61  AFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLK 120

Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           P ++L+   G  H+ LTDFGL++ ++S G
Sbjct: 121 PENILLDADG--HIKLTDFGLAKELSSEG 147

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 95.7 bits (239), Expect = 2e-21
 Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 4/154 (2%)

Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
            + Y   +++G G +G VY A +R++G+  A K M     Q K L  NE+ IM    H N
Sbjct: 18  RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMR-LRKQNKELIINEILIMKDCKHPN 76

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           +V  +DSY   D   ++ E   GG L   +T+      E  IA+  R++L GL+Y+H  +
Sbjct: 77  IVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN 136

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           + H  +   ++L++  G   + L DFG + ++T 
Sbjct: 137 VIHRDIKSDNILLSKDG--SVKLADFGFAAQLTK 168

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 95.0 bits (237), Expect = 2e-21
 Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 7/153 (4%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVR 244
           ++  +++G+G  G VY A  + +G+  A KV+  +  + K    NE+ I+ +  H N+V+
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61

Query: 245 LHDSYETKDSFTIISELAGGG---ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
            + SY  KD   I+ E   GG   +LL S  +    TE  IA+  ++LL GL+Y+H   I
Sbjct: 62  YYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQT--LTESQIAYVCKELLKGLEYLHSNGI 119

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            H  +   ++L+   G   + L DFGLS +++ 
Sbjct: 120 IHRDIKAANILLTSDG--EVKLIDFGLSAQLSD 150

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 93.5 bits (233), Expect = 6e-21
 Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 4/155 (2%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--FKNELDIMNQLCHRNL 242
           Y  GD +GRG  G+VY  +   +G   A K ++ +  + ++L     E+D++  L H N+
Sbjct: 2   YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNI 61

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
           V+   S ET DS  II E A  G L   + +   + E  +A Y+ Q+L GL Y+H   + 
Sbjct: 62  VKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVI 121

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           H  +   ++L    G   + L DFG++ ++    K
Sbjct: 122 HRDIKAANILTTKDG--VVKLADFGVATKLNDVSK 154

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 90.3 bits (225), Expect = 8e-20
 Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 14/151 (9%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYKSLFKNELDIMNQLCHRNLV 243
            ++G+G  G VY    +S G+ Y  K      M+ K  +  +L  NE+ I+ +L H N++
Sbjct: 6   KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEK-EREDAL--NEVKILKKLNHPNII 62

Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRL 299
           + ++S+E K    I+ E A GG+L   + +Q      + E  I  +  QL   L Y+H  
Sbjct: 63  KYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR 122

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  + P ++ +   G   + L DFG+S+
Sbjct: 123 KILHRDIKPQNIFLTSNG--LVKLGDFGISK 151

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 89.8 bits (221), Expect = 9e-19
 Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 11/166 (6%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQL-CHR 240
           Y    +LG G  G VY A +R   +  A KV+  K          F  E+ I+  L    
Sbjct: 2   YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 241 NLVRLHDSYETKDSFTIISELAGGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
           N+V+L+D ++ + S  ++ E   GG L   L  + R+   +E +    + Q+LS L+Y+H
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118

Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEY 343
              I H  + P ++L+    GR + L DFGL++ +   G  + +  
Sbjct: 119 SKGIIHRDIKPENILL-DRDGRVVKLIDFGLAKLLPDPGSTSSIPA 163

Length = 384

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 84.5 bits (210), Expect = 7e-18
 Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 6/158 (3%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
             + +  +L  L+YLH +G+ H +++P+N+++       VKL D G  +++     L   +
Sbjct: 100  RFYLRQILSALEYLHSKGIVHRDLKPENILL--DEDGHVKLADFGLARQLDPGEKLTTFV 157

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQNVNFVRYR 1067
             TP  E+ APEVL  +      D+WS GV+ Y LL+G  PF G  +  E  + +   +  
Sbjct: 158  GTP--EYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPP 215

Query: 1068 FEYLFKELTQEATRFLMLIFKHEVDW-ITLANNIDHEF 1104
            F     +++ EA   +  +   + +  +T    + H F
Sbjct: 216  FPPPEWDISPEAKDLIRKLLVKDPEKRLTAEEALQHPF 253

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 79.2 bits (196), Expect = 6e-16
 Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 7/144 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVM----TGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           + +G  G V+ A ++S+G  YA KV+      + NQ   +   E DI++Q     +V+L+
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLT-ERDILSQAQSPYVVKLY 59

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
            S++ K +  ++ E   GG+L   L       E     YI +++  L+Y+H   I H  L
Sbjct: 60  YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDL 119

Query: 307 TPGDLLVAHPGGRHLLLTDFGLSR 330
            P ++L+   G  HL LTDFGLS+
Sbjct: 120 KPDNILIDSNG--HLKLTDFGLSK 141

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 79.5 bits (197), Expect = 7e-16
 Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 13/157 (8%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL-------FKNELDIMN 235
           D ++F   LG G  G V     + SG+ YA K++    ++ K +         NE  I+ 
Sbjct: 1   DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKIL----SKAKIVKLKQVEHVLNEKRILQ 56

Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
            + H  LV L+ S++   +  ++ E   GGEL   L +   + E     Y  Q++  L+Y
Sbjct: 57  SIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEY 116

Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           +H L I +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 117 LHSLDIVYRDLKPENLLLDSDG--YIKITDFGFAKRV 151

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 78.4 bits (194), Expect = 1e-15
 Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 17/165 (10%)

Query: 951  CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPIN 1009
                +L GL+YLH  G+ H +++P+N+++    +  VK+ D G   + +    +L   + 
Sbjct: 103  IALQILRGLEYLHSNGIIHRDLKPENILL--DENGVVKIADFGLAKKLLKSSSSLTTFVG 160

Query: 1010 TPNPEFAAPEVLAE-EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--- 1065
            TP   + APEVL       P+ DVWS GV+ Y LL+G  PF G  E    Q     R   
Sbjct: 161  TP--WYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSG--ENILDQLQLIRRILG 216

Query: 1066 --YRFEYLFK-ELTQEATRFL--MLIFKHEVDWITLANNIDHEFW 1105
                F+       ++EA   +   L         T    + H ++
Sbjct: 217  PPLEFDEPKWSSGSEEAKDLIKKCLNKDPS-KRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 78.2 bits (193), Expect = 1e-15
 Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 7/154 (4%)

Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVMT-----GKGNQYKSLFKNELDIMNQLCHRNL 242
           G+ LG G  G VY  +    G  +A K ++       G +     + E+ ++++L H N+
Sbjct: 5   GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNI 64

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
           V+   +   +D+  I  EL  GG L   L +   + E  I  Y RQ+L GL+Y+H  +  
Sbjct: 65  VQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTV 124

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           H  +   ++LV   G   + L DFG+++++  F 
Sbjct: 125 HRDIKGANILVDTNG--VVKLADFGMAKQVVEFS 156

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 79.9 bits (197), Expect = 1e-15
 Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 11/143 (7%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLHD 247
           +G G  G VY  + R +GR YA KV+ G  N   ++ +    E++I+  + H N+V+ HD
Sbjct: 82  IGSGAGGTVYKVIHRPTGRLYALKVIYG--NHEDTVRRQICREIEILRDVNHPNVVKCHD 139

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
            ++      ++ E   GG    SL       E  +A   RQ+LSG+ Y+HR  I H  + 
Sbjct: 140 MFDHNGEIQVLLEFMDGG----SLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIK 195

Query: 308 PGDLLVAHPGGRHLLLTDFGLSR 330
           P +LL+     +++ + DFG+SR
Sbjct: 196 PSNLLIN--SAKNVKIADFGVSR 216

Length = 353

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 78.6 bits (194), Expect = 1e-15
 Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 15/152 (9%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           ELG G  G VY A  + +G   AAK++  +  +    F  E+DI+++  H N+V L+++Y
Sbjct: 12  ELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAY 71

Query: 250 ETKDSFTIISELAGGG-------ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
             ++   I+ E   GG       EL   L      TE  I +  RQ+L  L+++H   + 
Sbjct: 72  FYENKLWILIEFCDGGALDSIMLELERGL------TEPQIRYVCRQMLEALNFLHSHKVI 125

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           H  L  G++L+   G   + L DFG+S +  S
Sbjct: 126 HRDLKAGNILLTLDGD--VKLADFGVSAKNKS 155

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 78.6 bits (194), Expect = 1e-15
 Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 3/145 (2%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           ++G G TGIV  A ++S+GR  A K M  +  Q + L  NE+ IM    H N+V ++ SY
Sbjct: 26  KIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSY 85

Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
              D   ++ E   GG L   +T  +   E  IA     +L  L ++H   + H  +   
Sbjct: 86  LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSD 144

Query: 310 DLLVAHPGGRHLLLTDFGLSRRITS 334
            +L+   G   + L+DFG   +++ 
Sbjct: 145 SILLTSDG--RVKLSDFGFCAQVSK 167

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 77.1 bits (190), Expect = 2e-15
 Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYKSLFKNELDIMNQLCHRNLVR 244
            + +G  G VY A +RS+G  +A KV     M  K NQ  ++      +M Q     + +
Sbjct: 3   PISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAK-NQVTNVKAERAIMMIQGESPYVAK 61

Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
           L+ S+++KD   ++ E   GG+    +       E     YI +++ G++ +H+  I H 
Sbjct: 62  LYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHR 121

Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            + P +LL+   G  HL LTDFGLSR
Sbjct: 122 DIKPENLLIDQTG--HLKLTDFGLSR 145

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 77.6 bits (192), Expect = 3e-15
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN-------ELDIMNQL 237
           Y+ G +LG G   +VY A ++ +GR  A K +  K  + K            E+ ++ +L
Sbjct: 2   YEKGKKLGEGTYAVVYKARDKETGRIVAIKKI--KLGERKEAKDGINFTALREIKLLQEL 59

Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYM 296
            H N++ L D +  K +  ++ E     +L   +  +S   T  DI  Y+   L GL+Y+
Sbjct: 60  KHPNIIGLLDVFGHKSNINLVFEFMET-DLEKVIKDKSIVLTPADIKSYMLMTLRGLEYL 118

Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           H   I H  L P +LL+A   G  L L DFGL+R   S
Sbjct: 119 HSNWILHRDLKPNNLLIA-SDGV-LKLADFGLARSFGS 154

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 74.6 bits (184), Expect = 9e-15
 Identities = 32/89 (35%), Positives = 57/89 (64%), Gaps = 3/89 (3%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            +L+GL+YLH  G+ H +++P+N+++ S  + +VKL D G ++ +T   +L+  I    P 
Sbjct: 101  ILEGLEYLHSNGIIHRDLKPENILLDS-DNGKVKLADFGLSKLLTSDKSLLKTIVG-TPA 158

Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVL 1042
            + APEVL  +  +  ++D+WS GV+ Y L
Sbjct: 159  YMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 75.4 bits (186), Expect = 9e-15
 Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 8/161 (4%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLCHRN 241
           + Y+    +G G  G VY A + ++G   A KV+    G+ ++ + + E+ ++ +  H N
Sbjct: 3   EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEII-QQEISMLKECRHPN 61

Query: 242 LVRLHDSYETKDSFTIISELAGGGEL--LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           +V    SY  +D   I+ E  GGG L  ++ +TR    +E  IA+  R+ L GL Y+H  
Sbjct: 62  IVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGP-LSELQIAYVCRETLKGLAYLHET 120

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT-SFGKLN 339
              H  +   ++L+   G   + L DFG+S ++T +  K  
Sbjct: 121 GKIHRDIKGANILLTEDG--DVKLADFGVSAQLTATIAKRK 159

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 74.9 bits (185), Expect = 1e-14
 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG+L   L ++   +E +   Y+RQ+LS L+Y+H   I H  L P ++L+   G  H+ 
Sbjct: 80  EGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDG--HVK 137

Query: 523 LTDFGLSRRITSFGKLNPL 541
           L DFGL+R++    KL   
Sbjct: 138 LADFGLARQLDPGEKLTTF 156

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 76.4 bits (188), Expect = 1e-14
 Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 6/144 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +G+G  G V  A  ++ G+ YA KV+      K  + K +      ++  + H  LV LH
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLH 62

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
            S++T D    + +   GGEL   L R+  + E     Y  ++ S L Y+H L+I +  L
Sbjct: 63  YSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDL 122

Query: 307 TPGDLLVAHPGGRHLLLTDFGLSR 330
            P ++L+   G  H++LTDFGL +
Sbjct: 123 KPENILLDSQG--HVVLTDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 74.8 bits (185), Expect = 1e-14
 Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 18/159 (11%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVMT-GKGNQYKSLFKNELDIMNQLCHRN 241
            G +LG G  G VY    +  G       A K +  G   + +  F  E  IM +L H N
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPN 62

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           +VRL       +   I++E   GG+LL  L       T  D+     Q+  G++Y+   +
Sbjct: 63  IVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESKN 122

Query: 301 IAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRITS 334
             H      DL     LV       + ++DFGLSR I  
Sbjct: 123 FVH-----RDLAARNCLVTE--NLVVKISDFGLSRDIYE 154

Length = 258

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 75.3 bits (186), Expect = 2e-14
 Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 21/143 (14%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---------CTQRVTKLGTLI 1005
            +L  L+YLH +G+ H +++P+N+++   + + +K+ D G           +      T I
Sbjct: 111  ILLALEYLHSKGIIHRDLKPENILLD--KDMHIKITDFGTAKVLDPNSSPESNKGDATNI 168

Query: 1006 HPINTPN----------PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
                  N           E+ +PE+L E+P    +D+W+ G + Y +L+G  PFRG +E 
Sbjct: 169  DSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY 228

Query: 1056 ETRQNVNFVRYRFEYLFKELTQE 1078
             T Q +  + Y F   F    ++
Sbjct: 229  LTFQKILKLEYSFPPNFPPDAKD 251

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 74.6 bits (184), Expect = 2e-14
 Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 5/153 (3%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
           + +D  ++LG G  G VY A+ + +G+  A KV+  + +  + +   E+ I+ Q     +
Sbjct: 3   EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEI-IKEISILKQCDSPYI 60

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           V+ + SY       I+ E  G G +   +       TE +IA  + Q L GL+Y+H    
Sbjct: 61  VKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKK 120

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            H  +  G++L+   G     L DFG+S ++T 
Sbjct: 121 IHRDIKAGNILLNEEG--QAKLADFGVSGQLTD 151

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 74.6 bits (184), Expect = 4e-14
 Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 9/155 (5%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRL 245
            LG+G  G V+    + +G+ +A KV+      K N+ K +   E +I+  L H  L  L
Sbjct: 8   LLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVL-TEQEILATLDHPFLPTL 66

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
           + S++T+    ++ +   GGEL   L RQ     +E     Y  ++L  L+Y+H L I +
Sbjct: 67  YASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVY 126

Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
             L P ++L+   G  H++L+DF LS++       
Sbjct: 127 RDLKPENILLHESG--HIMLSDFDLSKQSDVEPPP 159

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 73.7 bits (181), Expect = 5e-14
 Identities = 53/184 (28%), Positives = 80/184 (43%), Gaps = 24/184 (13%)

Query: 161 NEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG 220
            EY Y     G +V                LG+G  GIVY A + S+    A K +  + 
Sbjct: 1   LEYEYEYDENGERVV---------------LGKGTYGIVYAARDLSTQVRIAIKEIPERD 45

Query: 221 NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY---- 276
           ++Y      E+ + + L HRN+V+   S      F I  E   GG  L +L R  +    
Sbjct: 46  SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGS-LSALLRSKWGPLK 104

Query: 277 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             E  I  Y +Q+L GL Y+H   I H  +   ++LV    G  + ++DFG S+R+    
Sbjct: 105 DNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGV-VKISDFGTSKRL---A 160

Query: 337 KLNP 340
            +NP
Sbjct: 161 GINP 164

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 74.5 bits (183), Expect = 5e-14
 Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 7/145 (4%)

Query: 191 LGRGVTGIVY---HAVERSSGRNYAAKVMTGKGNQYKSLF--KNELDIMNQLCHRNLVRL 245
           LG+G  G V+         +G+ YA KV+     + +     K E DI+ ++ H  +V+L
Sbjct: 4   LGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKL 63

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
           H +++T+    +I +   GG+L   L+++  +TE D+  Y+ +L   LD++H L I +  
Sbjct: 64  HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRD 123

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSR 330
           L P ++L+   G  H+ LTDFGLS+
Sbjct: 124 LKPENILLDEEG--HIKLTDFGLSK 146

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 73.0 bits (180), Expect = 6e-14
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 4/102 (3%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            AY    +L GL+YLH  G+ H +I+  N+++ S    +VKLID G + +++        +
Sbjct: 101  AYVCKELLKGLEYLHSNGIIHRDIKAANILLTS--DGEVKLIDFGLSAQLSDTKARNTMV 158

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFR 1050
             TP   + APEV+  +P   + D+WS G+ A  L  G  P+ 
Sbjct: 159  GTP--YWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYS 198

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 72.2 bits (177), Expect = 2e-13
 Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 3/145 (2%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +++G+G +G VY A++ ++G+  A K M  +    K L  NE+ +M +  H N+V   DS
Sbjct: 25  EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDS 84

Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
           Y   D   ++ E   GG L   +T ++   E  IA   R+ L  L+++H   + H  +  
Sbjct: 85  YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 143

Query: 309 GDLLVAHPGGRHLLLTDFGLSRRIT 333
            ++L+   G   + LTDFG   +IT
Sbjct: 144 DNILLGMDGS--VKLTDFGFCAQIT 166

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 71.5 bits (176), Expect = 2e-13
 Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 4/148 (2%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHD 247
             LG+G +G+VY    + +G+ YA K +   G+ +++     EL  +       +V+ + 
Sbjct: 7   KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYG 66

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGL 306
           ++  +   +I+ E   GG L   L +     E  +A+  RQ+L GLDY+H    I H  +
Sbjct: 67  AFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDI 126

Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            P +LL+   G   + + DFG+S+ + +
Sbjct: 127 KPSNLLINSKG--EVKIADFGISKVLEN 152

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 71.6 bits (176), Expect = 2e-13
 Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 12/154 (7%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCH 239
           D Y+  + +G G T +VY A+   +    A K +     + ++       E+  M+Q  H
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRI--DLEKCQTSVDELRKEVQAMSQCNH 58

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY----YTEYDIAHYIRQLLSGLDY 295
            N+V+ + S+   D   ++     GG LL  + + SY      E  IA  ++++L GL+Y
Sbjct: 59  PNVVKYYTSFVVGDELWLVMPYLSGGSLLD-IMKSSYPRGGLDEAIIATVLKEVLKGLEY 117

Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           +H     H  +  G++L+   G   + + DFG+S
Sbjct: 118 LHSNGQIHRDIKAGNILLGEDGS--VKIADFGVS 149

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 71.4 bits (176), Expect = 3e-13
 Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 20/157 (12%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLF----KNELDIMNQLCHRNLVR 244
            ++G G  G VY A  + +G   A K +  +    K  F      E+ ++ +L H N+VR
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVALKKI--RMENEKEGFPITAIREIKLLQKLRHPNIVR 62

Query: 245 LHDSYETKDSFTII-------SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
           L +   +K   +I         +L G   LL S   +  +TE  I  Y++QLL GL Y+H
Sbjct: 63  LKEIVTSKGKGSIYMVFEYMDHDLTG---LLDS--PEVKFTESQIKCYMKQLLEGLQYLH 117

Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
              I H  +   ++L+ + G   L L DFGL+R  T 
Sbjct: 118 SNGILHRDIKGSNILINNDG--VLKLADFGLARPYTK 152

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 70.3 bits (173), Expect = 4e-13
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQNVNFVRYRFEYLFKEL 1202
            APEVL  +      D+WS GV+ Y LL+G  PF G  +  E  + +   +  F     ++
Sbjct: 164  APEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDI 223

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + EA   +  +  + P KR T EE  ++ + 
Sbjct: 224  SPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 70.8 bits (174), Expect = 4e-13
 Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHRNLVRLH 246
            ++G G  G+VY A ++ +G   A K +  +            E+ ++ +L H N+++L 
Sbjct: 5   GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLL 64

Query: 247 DSYETKDSFTIISELAGGGELLHSL-----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           D +  K    ++ E      +   L      RQ    E  I  Y+ QLL GL + H   I
Sbjct: 65  DVFRHKGDLYLVFEF-----MDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGI 119

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            H  L P +LL+   G   L L DFGL+R
Sbjct: 120 LHRDLKPENLLINTEG--VLKLADFGLAR 146

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 70.3 bits (173), Expect = 5e-13
 Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 7/151 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK----GNQYKSLFKNELDIMNQLCHRNLVRLH 246
           LG G  G V     +S  R +A K +  +      Q + +F +E +I+ +  H  +V+L+
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIF-SEKEILEECNHPFIVKLY 59

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
            +++ K    ++ E   GGEL   L  +  + EY    YI  ++   +Y+H   I +  L
Sbjct: 60  RTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDL 119

Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
            P +LL+   G  ++ L DFG ++++ S  K
Sbjct: 120 KPENLLLDSNG--YVKLVDFGFAKKLKSGQK 148

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 70.8 bits (173), Expect = 7e-13
 Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 6/144 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK----GNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +G+G  G V  A  +  G+ YA KV+  K      + K +      ++  + H  LV LH
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLH 62

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
            S++T +    + +   GGEL   L R+  + E     Y  ++ S L Y+H ++I +  L
Sbjct: 63  YSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDL 122

Query: 307 TPGDLLVAHPGGRHLLLTDFGLSR 330
            P ++L+   G  H++LTDFGL +
Sbjct: 123 KPENILLDSQG--HVVLTDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 70.8 bits (173), Expect = 9e-13
 Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 6/144 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQLCHRNLVRLH 246
           +G+G  G V  A  ++  + YA KV+  K      + K +      ++  + H  LV LH
Sbjct: 3   IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 62

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
            S++T D    + +   GGEL + L R+  + E     Y  ++ S L Y+H L+I +  L
Sbjct: 63  FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDL 122

Query: 307 TPGDLLVAHPGGRHLLLTDFGLSR 330
            P ++L+   G  H++LTDFGL +
Sbjct: 123 KPENILLDSQG--HIVLTDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 70.1 bits (171), Expect = 9e-13
 Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 3/144 (2%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           ++G G TGIV  A E+ SGR  A K+M  +  Q + L  NE+ IM    H+N+V ++ SY
Sbjct: 28  KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY 87

Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
              +   ++ E   GG L   +  Q+   E  IA     +L  L Y+H   + H  +   
Sbjct: 88  LVGEELWVLMEFLQGGALT-DIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSD 146

Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
            +L+   G   + L+DFG   +I+
Sbjct: 147 SILLTLDG--RVKLSDFGFCAQIS 168

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 70.1 bits (171), Expect = 1e-12
 Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 3/145 (2%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +++G+G +G VY A++ ++G+  A K M  +    K L  NE+ +M +  + N+V   DS
Sbjct: 25  EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 84

Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
           Y   D   ++ E   GG L   +T ++   E  IA   R+ L  LD++H   + H  +  
Sbjct: 85  YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKS 143

Query: 309 GDLLVAHPGGRHLLLTDFGLSRRIT 333
            ++L+   G   + LTDFG   +IT
Sbjct: 144 DNILLGMDGS--VKLTDFGFCAQIT 166

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 69.1 bits (170), Expect = 1e-12
 Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 18/159 (11%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVM-TGKGNQYKSLFKNELDIMNQLCHRN 241
            G +LG G  G VY    +  G       A K +      Q    F  E  IM +L H N
Sbjct: 3   LGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           +V+L      ++   I+ E   GG+LL  L   +   +  D+  +  Q+  G++Y+   +
Sbjct: 63  VVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESKN 122

Query: 301 IAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRITS 334
             H      DL     LV       + ++DFGLSR +  
Sbjct: 123 FIHR-----DLAARNCLVGE--NLVVKISDFGLSRDLYD 154

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 68.8 bits (169), Expect = 2e-12
 Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 12/138 (8%)

Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLID-----LGCTQRVTKLGTL 1004
              +  ++  L+YLH  G+ H +++PDN+++ S  +  +KL D     +G  +R   L   
Sbjct: 97   IYIAEIVLALEYLHSNGIIHRDLKPDNILIDS--NGHLKLTDFGLSKVGLVRRQINLNDD 154

Query: 1005 IHPINT--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
                      P++ APEV+  +      D WS G + Y  L G  PF G++  E  QN+ 
Sbjct: 155  EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNI- 213

Query: 1063 FVRYRFEYL-FKELTQEA 1079
             +  + E+    E++ EA
Sbjct: 214  -LNGKIEWPEDVEVSDEA 230

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 69.6 bits (170), Expect = 2e-12
 Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 7/145 (4%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVM---TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           ++LG G    VY  + R +G+  A KV+   T +G  + ++   E  ++  L H N+V L
Sbjct: 11  EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAI--REASLLKGLKHANIVLL 68

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
           HD   TK++ T + E        + +        Y++  ++ QLL GL Y+H   I H  
Sbjct: 69  HDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRD 128

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSR 330
           L P +LL+++ G   L L DFGL+R
Sbjct: 129 LKPQNLLISYLG--ELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 69.2 bits (170), Expect = 2e-12
 Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 10/151 (6%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN 241
           Y     +G G  GIV+ A +R +G   A K +  +   G       + E+  +    H  
Sbjct: 2   YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALR-EIKALQACQHPY 60

Query: 242 LVRLHDSYETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           +V+L D +     F ++ E       E+L    R     E  +  Y+R LL G+ YMH  
Sbjct: 61  VVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERP--LPEAQVKSYMRMLLKGVAYMHAN 118

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +LL++  G   L + DFGL+R
Sbjct: 119 GIMHRDLKPANLLISADG--VLKIADFGLAR 147

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 68.9 bits (168), Expect = 2e-12
 Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 3/144 (2%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           ++G G TGIV  A E+ +G+  A K M  +  Q + L  NE+ IM    H N+V +++SY
Sbjct: 29  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY 88

Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
              D   ++ E   GG L   +T  +   E  IA     +L  L Y+H   + H  +   
Sbjct: 89  LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSD 147

Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
            +L+   G   + L+DFG   +++
Sbjct: 148 SILLTSDG--RIKLSDFGFCAQVS 169

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 67.9 bits (167), Expect = 4e-12
 Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 22/161 (13%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK------SLFKNELDIMNQLC 238
           Y+  ++LG G  G+VY A ++ +G   A K +  + +  +      +L   E+ ++ +L 
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKI--RLDNEEEGIPSTAL--REISLLKELK 56

Query: 239 HRNLVRLHDSYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
           H N+V+L D   T+    ++ E     L      L         +   I   + QLL GL
Sbjct: 57  HPNIVKLLDVIHTERKLYLVFEYCDMDLKK---YLDKRPGPL--SPNLIKSIMYQLLRGL 111

Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            Y H   I H  L P ++L+   G   L L DFGL+R    
Sbjct: 112 AYCHSHRILHRDLKPQNILINRDG--VLKLADFGLARAFGI 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 68.1 bits (166), Expect = 4e-12
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 3/144 (2%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           ++G G TGIV  A  +SSG+  A K M  +  Q + L  NE+ IM    H N+V +++SY
Sbjct: 27  KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86

Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
              D   ++ E   GG L   +T  +   E  IA     +L  L  +H   + H  +   
Sbjct: 87  LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSD 145

Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
            +L+ H G   + L+DFG   +++
Sbjct: 146 SILLTHDG--RVKLSDFGFCAQVS 167

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 68.5 bits (168), Expect = 5e-12
 Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 7/159 (4%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    +GRG  G V+   ++ +G+ YA KV+      K NQ  +  + E DI+    
Sbjct: 1   DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQ-IAHVRAERDILADAD 59

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              +V+L+ S++ ++   ++ E   GG+L++ L R+  + E     YI +L+  LD +H+
Sbjct: 60  SPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHK 119

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           L   H  + P ++L+   G  H+ L DFGL +++     
Sbjct: 120 LGFIHRDIKPDNILIDADG--HIKLADFGLCKKMNKAKD 156

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 67.6 bits (165), Expect = 5e-12
 Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 7/153 (4%)

Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSL--FKNELDIMNQLCHRN 241
           G +LG G     Y A +  +G   A K +T        Q + +   + E+ +M +L H +
Sbjct: 5   GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPH 64

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++R+  +      F +  E   GG + H L++   + E  I +Y  QLL GL Y+H   I
Sbjct: 65  IIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQI 124

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            H  +   +LL+    G+ L + DFG + R+ +
Sbjct: 125 IHRDVKGANLLI-DSTGQRLRIADFGAAARLAA 156

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 67.4 bits (164), Expect = 7e-12
 Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 3/145 (2%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +++G+G +G V+ A++ ++G+  A K +  +    K L  NE+ +M +L + N+V   DS
Sbjct: 25  EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDS 84

Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
           +   D   ++ E   GG L   +T ++   E  IA   R+ L  L+++H   + H  +  
Sbjct: 85  FLVGDELFVVMEYLAGGSLTDVVT-ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKS 143

Query: 309 GDLLVAHPGGRHLLLTDFGLSRRIT 333
            ++L+   G   + LTDFG   +IT
Sbjct: 144 DNVLLGMDGS--VKLTDFGFCAQIT 166

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 67.4 bits (164), Expect = 7e-12
 Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 3/145 (2%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +++G+G +G VY A++ ++G+  A + M  +    K L  NE+ +M +  + N+V   DS
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85

Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
           Y   D   ++ E   GG L   +T ++   E  IA   R+ L  L+++H   + H  +  
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144

Query: 309 GDLLVAHPGGRHLLLTDFGLSRRIT 333
            ++L+   G   + LTDFG   +IT
Sbjct: 145 DNILLGMDGS--VKLTDFGFCAQIT 167

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 67.7 bits (165), Expect = 8e-12
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 6/144 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQLCHRNLVRLH 246
           +G+G  G V  A  +S G  YA KV+  K      +   +      ++  L H  LV LH
Sbjct: 3   IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLH 62

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
            S++T +    + +   GGEL   L R+  + E     Y  ++ S + Y+H L+I +  L
Sbjct: 63  YSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDL 122

Query: 307 TPGDLLVAHPGGRHLLLTDFGLSR 330
            P ++L+   G  H++LTDFGL +
Sbjct: 123 KPENILLDSQG--HVVLTDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 66.9 bits (164), Expect = 8e-12
 Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 14/164 (8%)

Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HR 240
           T  ++  + +G G  G VY A  + +G+  A K+M    ++ + + K E +I+ +   H 
Sbjct: 5   TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEI-KEEYNILRKYSNHP 63

Query: 241 NLVRLHDSYETKDSFT------IISELAGGG---ELLHSLTRQ-SYYTEYDIAHYIRQLL 290
           N+   + ++  K+         ++ EL GGG   +L+  L ++     E  IA+ +R+ L
Sbjct: 64  NIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETL 123

Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            GL Y+H   + H  +   ++L+       + L DFG+S ++ S
Sbjct: 124 RGLAYLHENKVIHRDIKGQNILLTKNA--EVKLVDFGVSAQLDS 165

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 67.5 bits (165), Expect = 8e-12
 Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 9/151 (5%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           LG+G  G V    E+++G+ YA K     V+  K     +L ++   ++    H  L  L
Sbjct: 3   LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESR--VLQNTRHPFLTAL 60

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
             S++T D    + E A GGEL   L+R+  ++E     Y  +++S L Y+H   + +  
Sbjct: 61  KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRD 120

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           L   +L++   G  H+ +TDFGL +   S G
Sbjct: 121 LKLENLMLDKDG--HIKITDFGLCKEGISDG 149

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 66.4 bits (163), Expect = 9e-12
 Identities = 43/160 (26%), Positives = 65/160 (40%), Gaps = 19/160 (11%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVM-TGKGNQYKSLFKNELDIMNQLCHRN 241
            G +LG G  G VY    +  G       A K +      Q    F  E  IM +L H N
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSL--TRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           +V+L      ++   I+ E   GG+LL  L   R    +  D+  +  Q+  G++Y+   
Sbjct: 63  IVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK 122

Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRITS 334
           +  H      DL     LV       + ++DFGLSR +  
Sbjct: 123 NFIHR-----DLAARNCLVGE--NLVVKISDFGLSRDLYD 155

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 66.8 bits (164), Expect = 9e-12
 Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 15/158 (9%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK----NELDIMNQL-CH 239
           Y    +LG G  G VY A  + +G   A K M  K   + S  +     E+  + +L  H
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKK---FYSWEECMNLREVKSLRKLNEH 57

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ---SYYTEYDIAHYIRQLLSGLDYM 296
            N+V+L + +   D    + E   G   L+ L +      ++E  I   I Q+L GL ++
Sbjct: 58  PNIVKLKEVFRENDELYFVFEYMEGN--LYQLMKDRKGKPFSESVIRSIIYQILQGLAHI 115

Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           H+    H  L P +LLV+  G   + + DFGL+R I S
Sbjct: 116 HKHGFFHRDLKPENLLVS--GPEVVKIADFGLAREIRS 151

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 66.0 bits (162), Expect = 1e-11
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 11/139 (7%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---TKLGTLIHPINTP 1011
            +L+GL YLH  G+ H +I+  N+++ S     VKL D GC +R+              TP
Sbjct: 110  ILEGLAYLHSNGIVHRDIKGANILVDS--DGVVKLADFGCAKRLGDIETGEGTGSVRGTP 167

Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-- 1069
               + APEV+  E      D+WS G     + +G  P+     P     +  +    E  
Sbjct: 168  Y--WMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM--AALYKIGSSGEPP 223

Query: 1070 YLFKELTQEATRFLMLIFK 1088
             + + L++EA  FL    +
Sbjct: 224  EIPEHLSEEAKDFLRKCLR 242

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 66.6 bits (163), Expect = 1e-11
 Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 4/149 (2%)

Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--FKNELDIMNQLCHRNLVRL 245
           G+++G G  G VY AV   +G   A K +  + N  K++    +E+ ++  L H NLV+ 
Sbjct: 5   GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKY 64

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
           +     ++   I  E   GG L   L       E+ I  Y  QLL GL Y+H   I H  
Sbjct: 65  YGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRD 124

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           + P ++ + H G   + L DFG + ++ +
Sbjct: 125 IKPANIFLDHNG--VIKLGDFGCAVKLKN 151

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 66.3 bits (162), Expect = 1e-11
 Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 15/163 (9%)

Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK------VMTGKGNQYKSLFKNELDIMN 235
              +    ++G+G   +VY A+    GR  A K      +M  K  Q   L   E+D++ 
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQ-DCL--KEIDLLK 57

Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGEL----LHSLTRQSYYTEYDIAHYIRQLLS 291
           QL H N+++   S+   +   I+ ELA  G+L     H   ++    E  I  Y  QL S
Sbjct: 58  QLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCS 117

Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            L++MH   I H  + P ++ +   G   + L D GL R  +S
Sbjct: 118 ALEHMHSKRIMHRDIKPANVFITATGV--VKLGDLGLGRFFSS 158

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 65.4 bits (160), Expect = 2e-11
 Identities = 37/146 (25%), Positives = 80/146 (54%), Gaps = 7/146 (4%)

Query: 192 GRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           G+G  G V    +R + + +A K M      +    +++  NE  I+ +L H  LV L  
Sbjct: 9   GKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVL-NERRILQELNHPFLVNLWY 67

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           S++ +++  ++ +L  GG+L + L+++  ++E  +  +I +++  L+Y+H   I H  + 
Sbjct: 68  SFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIK 127

Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
           P ++L+   G  H+ +TDF ++ ++T
Sbjct: 128 PDNILLDEQG--HVHITDFNIATKVT 151

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 66.6 bits (162), Expect = 2e-11
 Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 5/143 (3%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD---IMNQLCHRNLVRLHD 247
           LG+G  G V    E++SG+ YA K++  +    K    + L    ++    H  L  L  
Sbjct: 3   LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKY 62

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           S++TKD    + E   GGEL   L+R+  ++E     Y  +++S LDY+H   I +  L 
Sbjct: 63  SFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLK 122

Query: 308 PGDLLVAHPGGRHLLLTDFGLSR 330
             +L++   G  H+ +TDFGL +
Sbjct: 123 LENLMLDKDG--HIKITDFGLCK 143

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 66.2 bits (162), Expect = 2e-11
 Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 8/114 (7%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHP 1007
            A  +     GLQ+LH RG+ + +++ DNV++ S     +K+ D G C + +    T    
Sbjct: 102  AAEIVL---GLQFLHERGIIYRDLKLDNVLLDS--EGHIKIADFGMCKEGILGGVTTSTF 156

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
              TP+  + APE+L+ +P  P  D W+ GVL Y +L+G SPF G  E E  Q++
Sbjct: 157  CGTPD--YIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSI 208

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 64.7 bits (157), Expect = 5e-11
 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 3/159 (1%)

Query: 176 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMN 235
           +R  P  D ++    +G G  G VY A   ++G   A KV+  +  +  ++ + E+ +M 
Sbjct: 3   SRRNPQED-FELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMK 61

Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
              H N+V    SY  +D   I  E  GGG L          +E  IA+  R+ L GL Y
Sbjct: 62  DCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYY 121

Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           +H     H  +   ++L+   G  H+ L DFG+S +IT+
Sbjct: 122 LHSKGKMHRDIKGANILLTDNG--HVKLADFGVSAQITA 158

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 63.7 bits (156), Expect = 7e-11
 Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--NPEF 1015
             L+YLH  G+ + +++P+N+++ +     +KL D G      +L +     NT    PE+
Sbjct: 105  ALEYLHSLGIIYRDLKPENILLDA--DGHIKLTDFG---LAKELSSEGSRTNTFCGTPEY 159

Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKE 1074
             APEVL  +      D WS GVL Y +L+G  PF  +   E  + +     RF E+L  E
Sbjct: 160  LAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPE 219

Query: 1075 L 1075
             
Sbjct: 220  A 220

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 64.6 bits (157), Expect = 8e-11
 Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 19/200 (9%)

Query: 942  IPTTHK-----DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CT 995
            I + HK       +    ++ GLQ+LH +G+ + +++ DN+++       +K+ D G C 
Sbjct: 87   IQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD--TDGHIKIADFGMCK 144

Query: 996  QRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
            + +  LG          P++ APE+L  +      D WS GVL Y +L G SPF G  E 
Sbjct: 145  ENM--LGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE 202

Query: 1056 ETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVD-WITLANNI-DHEFWHVKDL--- 1110
            E  Q+   +R       + LT+EA   L+ +F  E +  + +  +I  H F+   D    
Sbjct: 203  ELFQS---IRMDNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDWSAL 259

Query: 1111 -KRETNYTFRLSAKNVIGWS 1129
             +RE    F+   K+    S
Sbjct: 260  EEREIEPPFKPKVKSANDCS 279

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 63.4 bits (155), Expect = 9e-11
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG+L   L+R    +E +      Q+L GL+Y+H   I H  L P ++L+   G   + 
Sbjct: 81  EGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLDENG--VVK 138

Query: 523 LTDFGLSRRIT 533
           + DFGL++++ 
Sbjct: 139 IADFGLAKKLL 149

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 62.9 bits (154), Expect = 1e-10
 Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 7/110 (6%)

Query: 598 YQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT--LHQVNTEFDNLRSLRHERI 655
           Y+ + ++  G F  V  A +K  T  LVA K+ +         ++  E   L+ L+H  I
Sbjct: 1   YEILEKLGEGSFGKVYLARDK-KTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNI 59

Query: 656 ASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
             L + ++       +  LVME  +G D+   L  R   +E      + Q
Sbjct: 60  VRLYDVFE---DEDKL-YLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQ 105

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 64.4 bits (157), Expect = 1e-10
 Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 10/161 (6%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
            ++ GLQ+LH +G+ + +++ DNV++   +   +K+ D G C + +   G       TP  
Sbjct: 105  IICGLQFLHKKGIIYRDLKLDNVLLD--KDGHIKIADFGMCKENMNGEGKASTFCGTP-- 160

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
            ++ APE+L  +      D WS GVL Y +L G SPF G+ E E   +   +     +  +
Sbjct: 161  DYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDS---ILNDRPHFPR 217

Query: 1074 ELTQEATRFLMLIFKHEVD-WITLANNI-DHEFWHVKDLKR 1112
             +++EA   L  +F+ +    + +  +I  H F+   D +R
Sbjct: 218  WISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDWER 258

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 63.5 bits (154), Expect = 1e-10
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 3/145 (2%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           ELG G  G VY A  + +G   AAKV+  K  +    +  E+DI+    H N+V+L D++
Sbjct: 12  ELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 71

Query: 250 ETKDSFTIISELAGGGEL-LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
             +++  I+ E   GG +    L  +   TE  I    +Q L  L+Y+H   I H  L  
Sbjct: 72  YYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKA 131

Query: 309 GDLLVAHPGGRHLLLTDFGLSRRIT 333
           G++L    G   + L DFG+S + T
Sbjct: 132 GNILFTLDG--DIKLADFGVSAKNT 154

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 64.0 bits (154), Expect = 2e-10
 Identities = 43/195 (22%), Positives = 81/195 (41%), Gaps = 20/195 (10%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN-- 1012
            +L  L+YLH +G+ H +I+P+N+ +       VKLID G  + +   G+       P+  
Sbjct: 110  ILSALEYLHSKGIIHRDIKPENI-LLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTS 168

Query: 1013 ---PEFAAPEVLA---EEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVN 1062
               P + APEVL           +D+WS G+  Y LL+G  PF G+       +T + + 
Sbjct: 169  VGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL 228

Query: 1063 FVRYRF------EYLFKELTQEATRFLM-LIFKHEVDWITLANNIDHEFWHVKDLKRETN 1115
             +              + +++ A+  L  L+ K   + ++ ++++ H+      LK    
Sbjct: 229  ELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDL 288

Query: 1116 YTFRLSAKNVIGWSE 1130
                    +      
Sbjct: 289  SDLLKPDDSAPLRLS 303

Length = 384

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 63.5 bits (154), Expect = 2e-10
 Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 9/145 (6%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           LG+G  G V    E+++GR YA K     V+  K     ++   E  ++    H  L  L
Sbjct: 3   LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV--TESRVLQNTRHPFLTAL 60

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
             +++T D    + E A GGEL   L+R+  +TE     Y  +++S L+Y+H   + +  
Sbjct: 61  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 120

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSR 330
           +   +L++   G  H+ +TDFGL +
Sbjct: 121 IKLENLMLDKDG--HIKITDFGLCK 143

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 62.5 bits (152), Expect = 2e-10
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 6/131 (4%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            +L GLQ LH + + H +++  N+++ +  +  VK+ DLG + +V K       I TP+  
Sbjct: 112  LLRGLQALHEQKILHRDLKSANILLVA--NDLVKIGDLGIS-KVLKKNMAKTQIGTPH-- 166

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY-RFEYLFK 1073
            + APEV    P   ++D+WS G L Y + + A PF  +S  + R  V   +Y     ++ 
Sbjct: 167  YMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYS 226

Query: 1074 ELTQEATRFLM 1084
            +  Q   R ++
Sbjct: 227  QDLQNFIRSML 237

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 63.5 bits (154), Expect = 2e-10
 Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 8/123 (6%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNPEFA 1016
            GL +LH RG+ + +++ DNV++ S     +K+ D G C + +    T      TP  ++ 
Sbjct: 113  GLFFLHRRGIIYRDLKLDNVMLDS--EGHIKIADFGMCKEHMVDGVTTRTFCGTP--DYI 168

Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1076
            APE++A +P     D W+ GVL Y +L+G  PF G+ E E  Q++  + +   Y  K L+
Sbjct: 169  APEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI--MEHNVSYP-KSLS 225

Query: 1077 QEA 1079
            +EA
Sbjct: 226  KEA 228

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 63.1 bits (154), Expect = 2e-10
 Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 26/163 (15%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK----NELDIMNQLCHR 240
           Y+   +LG G  G VY A +  +GR  A K +       K  F      E+ I+ +L H 
Sbjct: 10  YEILGKLGEGTFGEVYKARQIKTGRVVALKKILMH--NEKDGFPITALREIKILKKLKHP 67

Query: 241 NLVRLHD--------SYETKDSFTIIS-----ELAGGGELLHSLTRQSYYTEYDIAHYIR 287
           N+V L D        S   + S  +++     +L+G   LL + + +   TE  I  Y+ 
Sbjct: 68  NVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSG---LLENPSVK--LTESQIKCYML 122

Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           QLL G++Y+H   I H  +   ++L+ + G   L + DFGL+R
Sbjct: 123 QLLEGINYLHENHILHRDIKAANILIDNQG--ILKIADFGLAR 163

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 62.4 bits (151), Expect = 2e-10
 Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 3/158 (1%)

Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQ 236
           R  P  D Y+    +G G  G VY A    +G   A K++  +     SL + E+ ++ +
Sbjct: 4   RRNPQHD-YELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKE 62

Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
             H N+V    SY +++   I  E  GGG L          +E  IA+  R+ L GL Y+
Sbjct: 63  CKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYL 122

Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           H     H  +   ++L+   G   + L DFG++ +IT+
Sbjct: 123 HSKGKMHRDIKGANILLTDNG--DVKLADFGVAAKITA 158

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 62.6 bits (152), Expect = 2e-10
 Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 11/154 (7%)

Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGN-----QYKSL---FKNELDIMNQLC 238
           G  +G G  G VY  +  SSG   A K V     +     + +S+      E+ ++ +L 
Sbjct: 5   GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ 64

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+   S    D   I  E   GG +   L     + E  + +++RQ+L GL+Y+H 
Sbjct: 65  HENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHN 124

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
             I H  +   ++LV + GG  + ++DFG+S+++
Sbjct: 125 RGIIHRDIKGANILVDNKGG--IKISDFGISKKL 156

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 62.8 bits (152), Expect = 3e-10
 Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 9/152 (5%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---TGKGNQYKSLFKNELDIMNQLCH 239
           D+Y+  ++LG G    VY    + +G+  A KV+     +G  + ++   E  ++  L H
Sbjct: 5   DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAI--REASLLKGLKH 62

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD-IAHYIRQLLSGLDYMHR 298
            N+V LHD   TK++ T++ E     +L   + +       + +  ++ QLL GL Y+H+
Sbjct: 63  ANIVLLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQ 121

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
             I H  L P +LL++  G   L L DFGL+R
Sbjct: 122 RYILHRDLKPQNLLISDTG--ELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 62.5 bits (152), Expect = 4e-10
 Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 11/148 (7%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT------GKGNQYKSLFKNELDIMNQLCHRNLVR 244
           +G G  G V+   +R S   YA KVM        K  Q+     NE  ++ ++ H  ++R
Sbjct: 9   VGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQH---VHNEKRVLKEVSHPFIIR 65

Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
           L  +   +    ++ E   GGEL   L     ++      Y  +++  L+Y+H   I + 
Sbjct: 66  LFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYR 125

Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            L P ++L+   G  H+ LTDFG ++++
Sbjct: 126 DLKPENILLDKEG--HIKLTDFGFAKKL 151

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 62.4 bits (151), Expect = 4e-10
 Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 7/152 (4%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
           + ++   ELG G  G VY A  + +G   AAKV+  K  +    +  E++I+    H  +
Sbjct: 12  EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYI 71

Query: 243 VRLHDSYETKDSFTIISELAGGG---ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           V+L  ++       I+ E   GG    ++  L R    TE  I    RQ+L  L Y+H +
Sbjct: 72  VKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQVICRQMLEALQYLHSM 129

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
            I H  L  G++L+   G   + L DFG+S +
Sbjct: 130 KIIHRDLKAGNVLLTLDG--DIKLADFGVSAK 159

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 61.8 bits (151), Expect = 4e-10
 Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 25/162 (15%)

Query: 189 DELGRGVTGIVYHAV---ERSSGRNYAAKVMTG-KGNQYKSLFKNELDIMNQLCHRNLVR 244
            +LG G  G VY      +       A K +      + +  F  E  +M +L H N+VR
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEY---------DIAHYIRQLLSGLDY 295
           L      ++   ++ E   GG+LL  L +                D+  +  Q+  G++Y
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120

Query: 296 MHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
           +      H      DL     LV       + ++DFGLSR +
Sbjct: 121 LASKKFVH-----RDLAARNCLVGE--DLVVKISDFGLSRDV 155

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 61.5 bits (150), Expect = 5e-10
 Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 37/169 (21%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAK---VMTGKGNQYKSLFKNELDIMNQLC--- 238
           Y+   E+G G  G VY A + ++GR  A K   V   +     S  + E+ ++ QL    
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLR-EIALLKQLESFE 59

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI------------ 286
           H N+VRL D      +   +            LT    + + D+A Y+            
Sbjct: 60  HPNIVRLLDVCHGPRTDREL-----------KLTLVFEHVDQDLATYLSKCPKPGLPPET 108

Query: 287 -----RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
                RQLL G+D++H   I H  L P ++LV   G   + + DFGL+R
Sbjct: 109 IKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDG--QVKIADFGLAR 155

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 62.0 bits (150), Expect = 6e-10
 Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 10/146 (6%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           LG+G  G V    E+++GR YA K     V+  K     +L +N   ++    H  L  L
Sbjct: 3   LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR--VLQNSRHPFLTAL 60

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHL 304
             S++T D    + E A GGEL   L+R+  ++E     Y  +++S LDY+H   ++ + 
Sbjct: 61  KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 120

Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L   +L++   G  H+ +TDFGL +
Sbjct: 121 DLKLENLMLDKDG--HIKITDFGLCK 144

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 62.2 bits (152), Expect = 6e-10
 Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 26/155 (16%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------ELDIMNQLCHRN 241
           +G G  G+V  AV++ +GR  A K ++       ++F +         E+ ++  L H N
Sbjct: 8   IGSGAYGVVCSAVDKRTGRKVAIKKIS-------NVFDDLIDAKRILREIKLLRHLRHEN 60

Query: 242 LVRLHD-----SYETKDSFTIISELAGGGELLHSLTRQSYY-TEYDIAHYIRQLLSGLDY 295
           ++ L D     S E  +   I++EL      LH + +     T+  I +++ Q+L GL Y
Sbjct: 61  IIGLLDILRPPSPEDFNDVYIVTELMETD--LHKVIKSPQPLTDDHIQYFLYQILRGLKY 118

Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           +H  ++ H  L P ++LV       L + DFGL+R
Sbjct: 119 LHSANVIHRDLKPSNILVNS--NCDLKICDFGLAR 151

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 61.8 bits (150), Expect = 7e-10
 Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 6/155 (3%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           +GRG  G V    E+++G  YA KVM        +  S F+ E DI++      + +L  
Sbjct: 9   VGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQY 68

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLSIAHLGL 306
           +++ KD+  ++ E   GG+LL  L R     + D+A  Y+ +L+  +  +H++   H  +
Sbjct: 69  AFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDI 128

Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL 341
            P ++L+   G  H+ L DFG + R+T+   +N  
Sbjct: 129 KPENVLIDRTG--HIKLADFGSAARLTANKMVNSK 161

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 60.6 bits (147), Expect = 9e-10
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 7/150 (4%)

Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKS----LFKNELDIMNQLCHRNL 242
           G  LG+G  G VY   +  +GR  A K V     +          + E+ ++  L H  +
Sbjct: 7   GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERI 66

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
           V+ +      ++ +I  E   GG +   L      TE     Y RQ+L G++Y+H   I 
Sbjct: 67  VQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIV 126

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           H  +   ++L    G  ++ L DFG S+R+
Sbjct: 127 HRDIKGANILRDSAG--NVKLGDFGASKRL 154

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 61.4 bits (149), Expect = 9e-10
 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 9/147 (6%)

Query: 191 LGRGVTGIVYHA---VERSSGRNYAAKVM---TGKGNQYKSLF-KNELDIMNQLCHRNLV 243
           LG+G  G V+         +G+ +A KV+   T   NQ  +   K E +I+  + H  +V
Sbjct: 4   LGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIV 63

Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
            L  +++T     +I E   GGEL   L R+  + E     Y+ ++   L+++H+  I +
Sbjct: 64  DLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIY 123

Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSR 330
             L P ++L+   G  H+ LTDFGL +
Sbjct: 124 RDLKPENILLDAQG--HVKLTDFGLCK 148

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 60.3 bits (147), Expect = 1e-09
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 5/99 (5%)

Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH-PINT 1010
            V  VL GL YLH +G+ H +I+  N++      V  KL D G   ++  +       + T
Sbjct: 105  VYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVV--KLADFGVATKLNDVSKDDASVVGT 162

Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            P   + APEV+        +D+WS G     LL+G  P+
Sbjct: 163  PY--WMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPY 199

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 60.3 bits (147), Expect = 1e-09
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 16/121 (13%)

Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT---QRVTKLGTLIH 1006
            + +  V+   +YLH RG+ + +++P+N+++ S  +  VKL+D G     +   K  T   
Sbjct: 97   FYIACVVLAFEYLHNRGIIYRDLKPENLLLDS--NGYVKLVDFGFAKKLKSGQKTWTFCG 154

Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
                  PE+ APE++  +      D WS G+L Y LL+G  PF    E +         Y
Sbjct: 155  -----TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPF---GEDDEDP---MEIY 203

Query: 1067 R 1067
             
Sbjct: 204  N 204

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 61.0 bits (148), Expect = 1e-09
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 9/112 (8%)

Query: 962  LHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVL 1021
            +H  G  H +I+P+NV++   R+  +KL D G   R+T    +   +    P++ APEVL
Sbjct: 118  VHQMGYVHRDIKPENVLID--RTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVL 175

Query: 1022 ------AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV-NFVRY 1066
                   +     + D WS GV+AY ++ G SPF   +  +T  N+ NF R+
Sbjct: 176  TTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRF 227

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 61.1 bits (148), Expect = 1e-09
 Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 20/152 (13%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--------- 241
           +G+G  G VY   ++ + R YA KV++      K     + ++ + +  RN         
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLS------KKEIVAKKEVAHTIGERNILVRTLLDE 54

Query: 242 ---LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              +V L  S++T     ++++   GGEL   L ++  ++E     YI +L+  L+++H+
Sbjct: 55  SPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHK 114

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
             I +  L P ++L+   G  H+ L DFGLS+
Sbjct: 115 YDIVYRDLKPENILLDATG--HIALCDFGLSK 144

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 60.9 bits (148), Expect = 1e-09
 Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 19/110 (17%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRV-------TKLGTLIH 1006
            V+ GLQYLH   + + +++ DN+++       VK+ D G C + +       T  GT   
Sbjct: 110  VVLGLQYLHENKIVYRDLKLDNLLLD--TEGFVKIADFGLCKEGMGFGDRTSTFCGT--- 164

Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
                  PEF APEVL E       D W  GVL Y +L G SPF G  E E
Sbjct: 165  ------PEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE 208

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 60.7 bits (147), Expect = 2e-09
 Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 5/143 (3%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN---LVRLHD 247
           +G+G  G V    +R + R YA K +       +S   + L     L   N   +V L  
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKF 60

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           S+++ +   ++     GGEL H L R+  +       Y  +LL  L+ +H+ ++ +  L 
Sbjct: 61  SFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLK 120

Query: 308 PGDLLVAHPGGRHLLLTDFGLSR 330
           P ++L+ + G  H+ L DFGL +
Sbjct: 121 PENILLDYQG--HIALCDFGLCK 141

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 61.2 bits (148), Expect = 2e-09
 Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 9/143 (6%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQLCHRNLVRLH 246
           LG G  G V  A +  +   YA K +  K     NQ   + K E DI+ +  +  +VRL+
Sbjct: 9   LGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHV-KAERDILAEADNEWVVRLY 67

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLSIAHLG 305
            S++ KD+   + +   GG+++  L R   + E D+A  YI +L   ++ +H++   H  
Sbjct: 68  YSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPE-DLARFYIAELTCAVESVHKMGFIHRD 126

Query: 306 LTPGDLLVAHPGGRHLLLTDFGL 328
           + P ++L+   G  H+ LTDFGL
Sbjct: 127 IKPDNILIDRDG--HIKLTDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 60.2 bits (146), Expect = 2e-09
 Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 28/167 (16%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK----NELDIMNQLC 238
           D +D   ++G G  G VY A ++ +G   A K +  + +  K  F      E+ I+ QL 
Sbjct: 7   DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKV--RLDNEKEGFPITAIREIKILRQLN 64

Query: 239 HRNLVRLH----------DSYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIA 283
           HRN+V L           D  + K +F ++ E     L G   LL S     +++E  I 
Sbjct: 65  HRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMG---LLES--GLVHFSEDHIK 119

Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            +++QLL GL+Y H+ +  H  +   ++L+ + G   + L DFGL+R
Sbjct: 120 SFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKG--QIKLADFGLAR 164

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 60.6 bits (147), Expect = 2e-09
 Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 32/135 (23%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRV-------TKLGTLIHPIN 1009
            GL +LH +G+ + +++ DNV++ +     +K+ D G C + +       T  GT      
Sbjct: 113  GLFFLHSKGIIYRDLKLDNVMLDA--EGHIKIADFGMCKENIFGGKTTRTFCGT------ 164

Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE-----TRQNVNFV 1064
               P++ APE++A +P     D W+ GVL Y +L+G  PF G+ E E        NV++ 
Sbjct: 165  ---PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP 221

Query: 1065 RYRFEYLFKELTQEA 1079
                    K L++EA
Sbjct: 222  --------KSLSKEA 228

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 59.1 bits (144), Expect = 3e-09
 Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGGEL   L+++  ++E     Y  +++  L+Y+H L I +  L P ++L+   G  H+ 
Sbjct: 76  PGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADG--HIK 133

Query: 523 LTDFGLSRRITSFG 536
           LTDFGL++ ++S G
Sbjct: 134 LTDFGLAKELSSEG 147

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 59.8 bits (145), Expect = 3e-09
 Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 27/164 (16%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQ-YKSLFKNELDIMNQLCHRNL 242
           Y+  +++G G  G V+ A  R +    A K V     ++   S    E+ ++ +L H+N+
Sbjct: 2   YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 61

Query: 243 VRLHDSYETKDSFTIISEL----------AGGGELLHSLTRQSYYTEYDIAHYIRQLLSG 292
           VRL+D   +    T++ E           +  G++   + +           ++ QLL G
Sbjct: 62  VRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKS----------FMFQLLKG 111

Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           L + H  ++ H  L P +LL+   G   L L DFGL+R   +FG
Sbjct: 112 LAFCHSHNVLHRDLKPQNLLINKNG--ELKLADFGLAR---AFG 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 59.2 bits (144), Expect = 3e-09
 Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 15/163 (9%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNL 242
           Y+  + +G+G  G V     +S G+    K +       + K    +E++I+ +L H N+
Sbjct: 2   YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNI 61

Query: 243 VRLHDSYETKDSFT--IISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYM 296
           VR +D    + + T  I+ E   GG+L   + +    + Y  E  I   + QLL  L   
Sbjct: 62  VRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYEC 121

Query: 297 HRLS-----IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           H  S     + H  L P ++ +      ++ L DFGL++ +  
Sbjct: 122 HNRSDPGNTVLHRDLKPANIFLD--ANNNVKLGDFGLAKILGH 162

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 59.2 bits (143), Expect = 3e-09
 Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 17/159 (10%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHD--- 247
           +GRG  G VY   +  +G+ YA K +  K  + K   + E   +N+    +LV   D   
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK---QGETLALNERIMLSLVSTGDCPF 58

Query: 248 ------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
                 ++ T D    I +L  GG+L + L++   ++E ++  Y  +++ GL++MH   +
Sbjct: 59  IVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFV 118

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
            +  L P ++L+   G  H+ ++D GL+     F K  P
Sbjct: 119 VYRDLKPANILLDEHG--HVRISDLGLA---CDFSKKKP 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 58.7 bits (143), Expect = 4e-09
 Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 8/93 (8%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG L   L +     E  I  Y RQ+L GL Y+H   I H  +   ++LV   G   + 
Sbjct: 84  SGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG--VVK 141

Query: 523 LTDFGLSRRITSFGKLNPLEYGNGQYKVAVTPA 555
           L DFG ++R+        +E G G   V  TP 
Sbjct: 142 LADFGCAKRLGD------IETGEGTGSVRGTPY 168

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 58.6 bits (142), Expect = 4e-09
 Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 8/152 (5%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFK-NELDIMNQLCHRNLVRLH 246
            +LG+G  G VY     S  + YA K +  G  +Q +     NE+ I+  + H N++   
Sbjct: 6   KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYK 65

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSY----YTEYDIAHYIRQLLSGLDYMHRLSIA 302
           +++   +   I+ E A  G+L  +++++        E +I     QLL GL  +H   I 
Sbjct: 66  EAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKIL 125

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           H  L   ++L+       + + D G+S+ +  
Sbjct: 126 HRDLKSANILLVAND--LVKIGDLGISKVLKK 155

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 58.9 bits (143), Expect = 4e-09
 Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 6/164 (3%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHR 240
           + Y+    +G G  G+V     +++G   A K           K     E+ ++ QL H 
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHE 60

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD-IAHYIRQLLSGLDYMHRL 299
           N+V L +++  K    ++ E      LL  L         D +  YI QLL  + Y H  
Sbjct: 61  NIVNLKEAFRRKGRLYLVFEYVER-TLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH 119

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEY 343
           +I H  + P ++LV+  G   L L DFG +R + +       +Y
Sbjct: 120 NIIHRDIKPENILVSESG--VLKLCDFGFARALRARPASPLTDY 161

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 58.8 bits (142), Expect = 4e-09
 Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 7/147 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           LG+G  G V     R++G+ YA K +  K     + +S+  NE  I+ ++  + +V L  
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAY 67

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSY--YTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
           +YETKD+  ++  +  GG+L   +       + E     Y  ++L GL+ +HR +  +  
Sbjct: 68  AYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRD 127

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L P ++L+   G  H+ ++D GL+ +I
Sbjct: 128 LKPENILLDDYG--HIRISDLGLAVKI 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 58.7 bits (143), Expect = 5e-09
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           P GELL  + +     E     Y  ++L  L+Y+H   I H  L P ++L+      H+ 
Sbjct: 85  PNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDM--HIK 142

Query: 523 LTDFGLSR 530
           +TDFG ++
Sbjct: 143 ITDFGTAK 150

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 58.4 bits (142), Expect = 5e-09
 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGG+L   L       E     YI +++  L+Y+H   I H  L P ++L+   G  HL 
Sbjct: 76  PGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNG--HLK 133

Query: 523 LTDFGLSR 530
           LTDFGLS+
Sbjct: 134 LTDFGLSK 141

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 59.2 bits (143), Expect = 5e-09
 Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 5/105 (4%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNPEFA 1016
            GL +LH +G+ + +++ DNV++ S     +K+ D G C + +    T      TP  ++ 
Sbjct: 113  GLFFLHSKGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENMWDGVTTKTFCGTP--DYI 168

Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            APE++A +P     D W+ GVL Y +L+G +PF G+ E E  Q++
Sbjct: 169  APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 213

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 58.6 bits (142), Expect = 5e-09
 Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 15/158 (9%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK-SLFKNELDIMNQLCH---RNLVRLH 246
           +GRG  G VY      +GR  A K++         S  + E+ +++QL      N+ + +
Sbjct: 9   IGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYY 68

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
            SY       II E A GG +  +L +     E  I+  IR++L  L Y+H++ + H  +
Sbjct: 69  GSYLKGPRLWIIMEYAEGGSVR-TLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDI 127

Query: 307 TPGDLLVAHPGGRHLLLTDFGL--------SRRITSFG 336
              ++LV + G  ++ L DFG+        S+R T  G
Sbjct: 128 KAANILVTNTG--NVKLCDFGVAALLNQNSSKRSTFVG 163

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 60.3 bits (146), Expect = 5e-09
 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 27/161 (16%)

Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC 238
           KPI+          RG  G VY   ++++ + YA KV+       K+   N+  +     
Sbjct: 10  KPIS----------RGAFGKVYLGRKKNNSKLYAVKVVK------KADMINKNMVHQVQA 53

Query: 239 HRN---------LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQL 289
            R+         +V L+ S ++ ++  ++ E   GG++   L    Y+ E     YI ++
Sbjct: 54  ERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEV 113

Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
              LDY+HR  I H  L P ++L+++ G  H+ LTDFGLS+
Sbjct: 114 ALALDYLHRHGIIHRDLKPDNMLISNEG--HIKLTDFGLSK 152

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 58.3 bits (141), Expect = 6e-09
 Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 12/137 (8%)

Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
            +  V+ G++ LH RG+ H +I+P+N+++    +  +KL D G ++       L +     
Sbjct: 103  IAEVVLGVEDLHQRGIIHRDIKPENLLIDQ--TGHLKLTDFGLSRNG-----LENKKFVG 155

Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV-----NFVRY 1066
             P++ APE +        +D WS G + +  L G  PF  ++      N+     N+   
Sbjct: 156  TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEE 215

Query: 1067 RFEYLFKELTQEATRFL 1083
              E+   E      R L
Sbjct: 216  VKEFCSPEAVDLINRLL 232

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 59.0 bits (143), Expect = 6e-09
 Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 21/160 (13%)

Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----------------EL 231
           G  LG G  G V  A +  +G+  A K +  K  +  +                    EL
Sbjct: 14  GAHLGEGTYGKVEKAYDTLTGKIVAIKKV--KIIEISNDVTKDRQLVGMCGIHFTTLREL 71

Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
            IMN++ H N++ L D Y   D   ++ ++    +L   + R+   TE  +   + Q+L+
Sbjct: 72  KIMNEIKHENIMGLVDVYVEGDFINLVMDIM-ASDLKKVVDRKIRLTESQVKCILLQILN 130

Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
           GL+ +H+    H  L+P ++ +   G     + DFGL+RR
Sbjct: 131 GLNVLHKWYFMHRDLSPANIFINSKG--ICKIADFGLARR 168

Length = 335

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 58.3 bits (141), Expect = 6e-09
 Identities = 38/144 (26%), Positives = 75/144 (52%), Gaps = 7/144 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK---NELDIMNQLCHRNLVRLHD 247
           LG+G  G V     +++G+ YA K +  K  + +   +   NE  I+ ++  R +V L  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60

Query: 248 SYETKDSFTIISELAGGGELLHSLTR--QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
           ++ETKD   ++  L  GG+L + +    +  + E     Y  Q++ GL+++H+  I +  
Sbjct: 61  AFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRD 120

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLS 329
           L P ++L+   G  ++ ++D GL+
Sbjct: 121 LKPENVLLDDHG--NVRISDLGLA 142

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 58.5 bits (141), Expect = 6e-09
 Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 7/147 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           LG+G  G V     R++G+ YA K +  K     + +S+  NE  I+ ++  R +V L  
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAY 67

Query: 248 SYETKDSFTIISELAGGGELLHSLTR--QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
           +YETKD+  ++  L  GG+L   +    ++ + E     Y  ++  GL+ +H+  I +  
Sbjct: 68  AYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRD 127

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L P ++L+   G  H+ ++D GL+  +
Sbjct: 128 LKPENILLDDHG--HIRISDLGLAVHV 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 58.6 bits (142), Expect = 8e-09
 Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 7/152 (4%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRL 245
           ++G+G  G V+ A ++ +G   A K M      K N+ + +   E DI+       LV+L
Sbjct: 8   QVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHV-LTERDILTTTKSEWLVKL 66

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
             +++  +   +  E   GG+    L      +E     Y+ ++   +D +H L   H  
Sbjct: 67  LYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRD 126

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           L P + L+   G  H+ LTDFGLS+ I ++  
Sbjct: 127 LKPENFLIDASG--HIKLTDFGLSKGIVTYAN 156

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 58.0 bits (140), Expect = 9e-09
 Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 13/157 (8%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRN----LV 243
           +GRG  G VY   +  +G+ YA K +  K     Q ++L  NE  IM  L        +V
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RIMLSLVSTGDCPFIV 60

Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
            +  ++ T D  + I +L  GG+L + L++   ++E ++  Y  +++ GL++MH   + +
Sbjct: 61  CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVY 120

Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
             L P ++L+   G  H+ ++D GL+     F K  P
Sbjct: 121 RDLKPANILLDEHG--HVRISDLGLA---CDFSKKKP 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 56.5 bits (137), Expect = 1e-08
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 463 PGGELLHSLTRQSYY-TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
            GG L   L       +E +I   + Q+L GL+Y+H   I H  L P ++L+    G  +
Sbjct: 74  EGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNG-KV 132

Query: 522 LLTDFGLSRRITSFGKLNPLEYGNGQY 548
            L DFGLS+ +TS   L     G   Y
Sbjct: 133 KLADFGLSKLLTSDKSLLKTIVGTPAY 159

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 57.8 bits (140), Expect = 1e-08
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 19/109 (17%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
            A    +VL  L +LH +G+ H +I+ D++++ S    +VKL D G C Q       R + 
Sbjct: 118  ATVCLAVLKALSFLHAQGVIHRDIKSDSILLTS--DGRVKLSDFGFCAQVSKEVPRRKSL 175

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            +GT         P + APEV++  P   + D+WS G++   ++ G  P+
Sbjct: 176  VGT---------PYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPY 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 58.0 bits (140), Expect = 1e-08
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 19/103 (18%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTKLGTLIH 1006
             L  L++LH   + H +I+ DN+++       VKL D G C Q       R T +GT   
Sbjct: 124  CLQALEFLHSNQVIHRDIKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSTMVGT--- 178

Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
                  P + APEV+  +   P+ D+WS G++A  ++ G  P+
Sbjct: 179  ------PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 57.7 bits (139), Expect = 1e-08
 Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 14/150 (9%)

Query: 191 LGRGVTGIVYHAVERS---SGRNYAAKVMT-------GKGNQYKSLFKNELDIMNQLCHR 240
           LG G  G V+   + S   SG+ YA KV+         K  ++    +  L+ + Q    
Sbjct: 8   LGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ--SP 65

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            LV LH +++T     +I +   GGEL   L+++  + E ++  Y  +++  L+++H+L 
Sbjct: 66  FLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLG 125

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           I +  +   ++L+   G  H++LTDFGLS+
Sbjct: 126 IIYRDIKLENILLDSNG--HVVLTDFGLSK 153

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 57.7 bits (140), Expect = 1e-08
 Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 17/159 (10%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK----NELDIMNQLC-H 239
           Y    ++G G    V  A  R +G+ YA K M      +KSL +     E+  + +L  H
Sbjct: 1   YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMK---KHFKSLEQVNNLREIQALRRLSPH 57

Query: 240 RNLVRLHDSY--ETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
            N++RL +           ++ EL      EL+    R+    E  +  Y+ QLL  LD+
Sbjct: 58  PNILRLIEVLFDRKTGRLALVFELMDMNLYELIKG--RKRPLPEKRVKSYMYQLLKSLDH 115

Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           MHR  I H  + P ++L+       L L DFG  R I S
Sbjct: 116 MHRNGIFHRDIKPENILIK---DDILKLADFGSCRGIYS 151

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 58.0 bits (140), Expect = 1e-08
 Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 28/192 (14%)

Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRV------ 998
            ++  +    ++ GLQ+LH +G+ + +++ DNV++   R   +K+ D G C + V      
Sbjct: 96   YRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLD--RDGHIKIADFGMCKENVFGDNRA 153

Query: 999  -TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
             T  GT         P++ APE+L         D WS GVL Y +L G SPF G  E E 
Sbjct: 154  STFCGT---------PDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDEL 204

Query: 1058 RQNVNFVRYRFEYLFKELTQEATRFLMLIFKHE-VDWITLANNI-DHEFWHVKDL----K 1111
             ++   +R    +  + +T+E+   L  +F+ +    + +  NI  H F+   +     K
Sbjct: 205  FES---IRVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINWTALEK 261

Query: 1112 RETNYTFRLSAK 1123
            RE +  F+   K
Sbjct: 262  RELDPPFKPKVK 273

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 57.0 bits (138), Expect = 1e-08
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 9/150 (6%)

Query: 189 DELGRGVTGIVYHAVERSSGR---NYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVR 244
            +LG G  G+V      +SG      A K + + K +     F  E  IM+ L H NL+R
Sbjct: 1   KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIR 60

Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
           L+    T     +++ELA  G LL  L +    ++    +  Y  Q+ +G+ Y+      
Sbjct: 61  LYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFI 119

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           H  L   ++L+A      + + DFGL R +
Sbjct: 120 HRDLAARNILLASD--DKVKIGDFGLMRAL 147

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 57.2 bits (138), Expect = 1e-08
 Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 17/157 (10%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           +GRG  GIV+    ++  +    K      MT          +NE  ++  L H N++  
Sbjct: 8   VGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAA---QNECQVLKLLSHPNIIEY 64

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
           ++++    +  I+ E A GG L   + ++  S   E  I H+  Q+L  L ++H   I H
Sbjct: 65  YENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILH 124

Query: 304 LGLTPGDLLVAHPGGRH---LLLTDFGLSRRITSFGK 337
             L   ++L+     +H   + + DFG+S+ ++S  K
Sbjct: 125 RDLKTQNILL----DKHKMVVKIGDFGISKILSSKSK 157

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 57.6 bits (139), Expect = 1e-08
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 3/102 (2%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            +   L +LH +G+ + +++ DNV++        KL D G  +     G          P+
Sbjct: 105  ITSALMFLHDKGIIYRDLKLDNVLLD--HEGHCKLADFGMCKEGIFNGKTTSTF-CGTPD 161

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
            + APE+L E    P  D W+ GVL Y +L G +PF  ++E +
Sbjct: 162  YIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD 203

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 57.8 bits (139), Expect = 1e-08
 Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 10/120 (8%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
            +D +  LH+    H +I+PDN++M    +  ++L D G   ++ + GT+   +    P++
Sbjct: 115  IDSVHQLHY---VHRDIKPDNILMD--MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDY 169

Query: 1016 AAPEVL-----AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
             +PE+L      +    P+ D WS GV  Y +L G +PF  +S  ET   +   + RF++
Sbjct: 170  ISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF 229

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 57.4 bits (139), Expect = 2e-08
 Identities = 49/153 (32%), Positives = 70/153 (45%), Gaps = 20/153 (13%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAK-VMTGK---GNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +G G  GIVY A + +SG   A K V       G    SL   E+ ++  L H N+V L 
Sbjct: 15  IGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSL--REITLLLNLRHPNIVELK 72

Query: 247 DSYETK--DSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           +    K  DS  ++ E     LA    LL ++     ++E  +   + QLL GL Y+H  
Sbjct: 73  EVVVGKHLDSIFLVMEYCEQDLA---SLLDNMPTP--FSESQVKCLMLQLLRGLQYLHEN 127

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            I H  L   +LL+   G   L + DFGL+R  
Sbjct: 128 FIIHRDLKVSNLLLTDKG--CLKIADFGLARTY 158

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 57.0 bits (138), Expect = 2e-08
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 39/167 (23%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT---GKGNQYKSLFKNELDIMNQLCH 239
           + Y   D+LG G    VY    + +G+  A K +     +G  + ++   E  ++  L H
Sbjct: 5   ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAI--REASLLKDLKH 62

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIR------------ 287
            N+V LHD   TK + T++ E                Y + D+  Y+             
Sbjct: 63  ANIVTLHDIIHTKKTLTLVFE----------------YLDTDLKQYMDDCGGGLSMHNVR 106

Query: 288 ----QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
               QLL GL Y H+  + H  L P +LL++  G   L L DFGL+R
Sbjct: 107 LFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG--ELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 57.5 bits (139), Expect = 2e-08
 Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 14/166 (8%)

Query: 178 TKPITDAY---DF--GDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFK 228
           TKP T ++   DF  G+ LG G  G V  A  + +G  YA K +      K  Q + + +
Sbjct: 8   TKPDTSSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQ 67

Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH-YIR 287
            E  I+ +L H  +V +  S++ ++    + E   GGEL   L +   +   D+A  Y  
Sbjct: 68  -EKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPN-DVAKFYHA 125

Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           +L+   +Y+H   I +  L P +LL+ + G  H+ +TDFG ++++ 
Sbjct: 126 ELVLAFEYLHSKDIIYRDLKPENLLLDNKG--HVKVTDFGFAKKVP 169

Length = 329

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 56.6 bits (137), Expect = 2e-08
 Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 23/177 (12%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRL 245
            ELG G +G+V   + R +G+  A K +  + N  +++ K    ELDI+++     +V  
Sbjct: 7   GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGF 64

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHR-LSIAH 303
           + ++      +I  E   GG L   L   Q    E  +      +L GL Y+H    I H
Sbjct: 65  YGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIH 124

Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRIT-SFGK-------------LNPLEYDVR 346
             + P ++LV   G   + L DFG+S ++  S  K             +   +Y V+
Sbjct: 125 RDVKPSNILVNSRG--QIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVK 179

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 57.7 bits (139), Expect = 2e-08
 Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 7/142 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQLCHRNLVRLH 246
           LG G  G V  A +  +   YA K +  K     NQ   + K E DI+ +  +  +V+L+
Sbjct: 9   LGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHV-KAERDILAEADNEWVVKLY 67

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
            S++ KD+   + +   GG+++  L R   + E     YI +L   ++ +H++   H  +
Sbjct: 68  YSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDI 127

Query: 307 TPGDLLVAHPGGRHLLLTDFGL 328
            P ++L+   G  H+ LTDFGL
Sbjct: 128 KPDNILIDLDG--HIKLTDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 56.4 bits (136), Expect = 2e-08
 Identities = 33/151 (21%), Positives = 72/151 (47%), Gaps = 8/151 (5%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNL 242
           ++  +++G+G  G+V+  V ++  R YA K   ++    + +    +E  ++ +L    +
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI 61

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLT---RQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           +R ++S+  K    I+ E A  G+ LH L    R     E  +  +  Q+L GL ++H  
Sbjct: 62  IRYYESFLDKGKLNIVMEYAENGD-LHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK 120

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  +   +L +      ++ + D G+++
Sbjct: 121 KILHRDIKSLNLFLD--AYDNVKIGDLGVAK 149

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 56.5 bits (136), Expect = 2e-08
 Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 12/155 (7%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM----TGKGNQYKSLFKN-ELDIMNQLCH 239
           Y     LG+G  G VY   ++ +      KV+     G+ N  +++  N E  ++++L H
Sbjct: 2   YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDH 61

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDY 295
             +V+ H S+  +D+F II+E   G +L   L          +E  +  +  QLL G+ Y
Sbjct: 62  PAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHY 121

Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           MH+  I H  L   ++ + +     L + DFG+SR
Sbjct: 122 MHQRRILHRDLKAKNIFLKN---NLLKIGDFGVSR 153

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 56.7 bits (137), Expect = 2e-08
 Identities = 30/93 (32%), Positives = 56/93 (60%), Gaps = 2/93 (2%)

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           LV LH +++T     +I +   GGEL   L ++ ++TE ++  YI +++  LD++H+L I
Sbjct: 67  LVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGI 126

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            +  +   ++L+   G  H++LTDFGLS+   +
Sbjct: 127 IYRDIKLENILLDSEG--HVVLTDFGLSKEFLA 157

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 56.1 bits (136), Expect = 3e-08
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 8/111 (7%)

Query: 598 YQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH---DTLHQVNTEFDNLRSLRHER 654
           Y+ + ++  G F  V KA +   T  +VA K+ +              E   LR L H  
Sbjct: 1   YELLRKLGSGSFGTVYKA-KHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPN 59

Query: 655 IASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
           I  L++A++      ++  LVME  +G D+  YLS     +E     I  Q
Sbjct: 60  IVRLIDAFEDK---DHLY-LVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQ 106

Length = 260

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 56.1 bits (136), Expect = 3e-08
 Identities = 33/97 (34%), Positives = 42/97 (43%), Gaps = 9/97 (9%)

Query: 1144 APEVLAE-EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR-----YRFEY 1197
            APEVL       P+ DVWS GV+ Y LL+G  PF G  E    Q     R       F+ 
Sbjct: 166  APEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSG--ENILDQLQLIRRILGPPLEFDE 223

Query: 1198 LFKELTQEATRFLML-IFKRAPGKRPTVEECHENRWL 1233
                   E  + L+     + P KRPT EE  ++ W 
Sbjct: 224  PKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 56.4 bits (137), Expect = 3e-08
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            +PE+L E+P    +D+W+ G + Y +L+G  PFRG +E  T Q +  + Y F   F    
Sbjct: 190  SPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPPNFPPDA 249

Query: 1204 QEATRFLMLIFK---RAPGKRPTVEECHEN 1230
            ++      LI K     P  R  V E ++ 
Sbjct: 250  KD------LIEKLLVLDPQDRLGVNEGYDE 273

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 55.8 bits (134), Expect = 4e-08
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 13/159 (8%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-----TGKGNQYKSLFKNELDIMNQLCH 239
           +  G  LG+G  G VY   +  +GR  A K +     + + ++  +  + E+ ++  L H
Sbjct: 4   WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLH 63

Query: 240 RNLVR----LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
             +V+    L D  E   + +I  E   GG +   L      TE     Y RQ+L G+ Y
Sbjct: 64  ERIVQYYGCLRDPMER--TLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSY 121

Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           +H   I H  +   ++L    G  ++ L DFG S+R+ +
Sbjct: 122 LHSNMIVHRDIKGANILRDSVG--NVKLGDFGASKRLQT 158

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 56.2 bits (136), Expect = 4e-08
 Identities = 55/196 (28%), Positives = 83/196 (42%), Gaps = 40/196 (20%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN-----------ELDIMNQLCH 239
           +G+G  G V+ A  + + +  A K         K L +N           E+ I+  L H
Sbjct: 20  IGQGTFGEVFKARHKKTKQIVALK---------KVLMENEKEGFPITALREIKILQLLKH 70

Query: 240 RNLVRLHDSYET--------KDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYI 286
            N+V L +   T        K SF ++ E     LAG   LL +   +  +T  +I   +
Sbjct: 71  ENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAG---LLSNKNVK--FTLSEIKKVM 125

Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVR 346
           + LL+GL Y+HR  I H  +   ++L+   G   L L DFGL+R  +      P  Y  R
Sbjct: 126 KMLLNGLYYIHRNKILHRDMKAANILITKDG--ILKLADFGLARAFSLSKNSKPNRYTNR 183

Query: 347 YVRQALRHPWLNFADR 362
            V    R P L   +R
Sbjct: 184 VVTLWYRPPELLLGER 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 55.6 bits (134), Expect = 5e-08
 Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 9/148 (6%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           LG+G  G V     R++G+ YA K +  K     + +++  NE  I+ ++  R +V L  
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 67

Query: 248 SYETKDSFTIISELAGGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
           +YETKD+  ++  L  GG+L   ++++     + E     Y  ++  GL+ +HR  I + 
Sbjct: 68  AYETKDALCLVLTLMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRERIVYR 126

Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            L P ++L+   G  H+ ++D GL+  I
Sbjct: 127 DLKPENILLDDYG--HIRISDLGLAVEI 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 55.2 bits (133), Expect = 6e-08
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 9/104 (8%)

Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
            V  +L GL YLH RG+ H +I+  N+++ +     +K+ D G ++++ +  +L    N  
Sbjct: 112  VRQILKGLNYLHNRGIIHRDIKGANILVDN--KGGIKISDFGISKKL-EANSLSTKTNGA 168

Query: 1012 NPEFA------APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
             P         APEV+ +     + D+WS G L   +L+G  PF
Sbjct: 169  RPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPF 212

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 56.2 bits (135), Expect = 6e-08
 Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRNLVRLHD 247
           +GRG  G V    ++ +G  YA K++       K      + E DI+ +     +V++  
Sbjct: 9   IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFY 68

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           S++ K +  +I E   GG+++  L ++   TE +   YI + +  +D +H+L   H  + 
Sbjct: 69  SFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIK 128

Query: 308 PGDLLVAHPGGRHLLLTDFGL 328
           P +LL+   G  H+ L+DFGL
Sbjct: 129 PDNLLLDSKG--HVKLSDFGL 147

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 55.0 bits (132), Expect = 7e-08
 Identities = 49/156 (31%), Positives = 69/156 (44%), Gaps = 13/156 (8%)

Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSLFKN----ELDIMNQLCHRNL 242
           G  LGRG  G VY   +  +GR  A K V     +Q  S   N    E+ ++  L H  +
Sbjct: 7   GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRI 66

Query: 243 VR----LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           V+    L D  E K   +I  E   GG +   L      TE     Y RQ+L G+ Y+H 
Sbjct: 67  VQYYGCLRDPEEKK--LSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHS 124

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             I H  +   ++L    G  ++ L DFG S+RI +
Sbjct: 125 NMIVHRDIKGANILRDSAG--NVKLGDFGASKRIQT 158

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 54.9 bits (133), Expect = 8e-08
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 19/109 (17%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
            AY    VL GL+YLH + + H +I+ DN++++   S  VKL D G   Q       R + 
Sbjct: 119  AYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGS--VKLADFGFAAQLTKEKSKRNSV 176

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            +GT         P + APEV+  +   P+ D+WS G++   +  G  P+
Sbjct: 177  VGT---------PYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPY 216

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 55.4 bits (134), Expect = 8e-08
 Identities = 35/131 (26%), Positives = 51/131 (38%), Gaps = 30/131 (22%)

Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CT------QRVTKLGTLIHPINTP 1011
            L  +H  G  H +I+PDN+++       +KL D G C        R   L    + +   
Sbjct: 114  LDSVHKLGFIHRDIKPDNILID--ADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRD 171

Query: 1012 N---------------------PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFR 1050
            N                     P++ APEVL   P   + D WS GV+ Y +L G  PF 
Sbjct: 172  NVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFY 231

Query: 1051 GQSEPETRQNV 1061
              +  ET   +
Sbjct: 232  SDTLQETYNKI 242

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 54.8 bits (132), Expect = 8e-08
 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 12/154 (7%)

Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAK---VMTGKGNQYKSL-------FKNELDIMNQL 237
           G+ +G+G  G VY A+  ++G   A K   +      ++ S         ++E++ +  L
Sbjct: 6   GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL 65

Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
            H N+V+      T++  +I  E   GG +   L     + E  +  +  Q+L GL Y+H
Sbjct: 66  DHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLH 125

Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
              I H  L   +LLV   G     ++DFG+S++
Sbjct: 126 SKGILHRDLKADNLLVDADG--ICKISDFGISKK 157

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 55.2 bits (133), Expect = 8e-08
 Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 28/161 (17%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 6   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 65

Query: 247 DSYETKDSFTIISEL-----------AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
           D   T++   ++ E            +    +   L          I  Y+ QLL GL +
Sbjct: 66  DVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPL----------IKSYLFQLLQGLAF 115

Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
            H   + H  L P +LL+   G   + L DFGL+R   +FG
Sbjct: 116 CHSHRVLHRDLKPQNLLINTEG--AIKLADFGLAR---AFG 151

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 55.8 bits (134), Expect = 8e-08
 Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK---SLFKNELDIMNQLCHRNLVRLHD 247
           +GRG  G V    ++ +G  YA K++       K   +  + E DI+ +     +V++  
Sbjct: 9   IGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFY 68

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           S++ K +  +I E   GG+++  L ++   +E     YI + +  +D +H+L   H  + 
Sbjct: 69  SFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIK 128

Query: 308 PGDLLVAHPGGRHLLLTDFGL 328
           P +LL+   G  H+ L+DFGL
Sbjct: 129 PDNLLLDAKG--HVKLSDFGL 147

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 55.3 bits (133), Expect = 9e-08
 Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 22/158 (13%)

Query: 191 LGRGVTGIVYHAVERSSGRN----YAAKVMTGKGNQYKSLFKNELDIMNQLCHRN----- 241
           LG G  G V+  V + +G +    YA KV+     Q  +L +    + +    RN     
Sbjct: 8   LGTGAYGKVF-LVRKVTGHDTGKLYAMKVL-----QKAALVQKAKTVEHTRTERNVLEHV 61

Query: 242 -----LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
                LV LH +++T+    +I +   GGE+   L ++  ++E ++  Y  +++  L+++
Sbjct: 62  RQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHL 121

Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           H+L I +  +   ++L+   G  H++LTDFGLS+   S
Sbjct: 122 HKLGIVYRDIKLENILLDSEG--HVVLTDFGLSKEFLS 157

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 54.7 bits (131), Expect = 1e-07
 Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 12/148 (8%)

Query: 911  LEM-KCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCH 969
            +EM K   VGE   V+  F  G +    +        + A    SVL  L YLH +G+ H
Sbjct: 81   VEMYKSYLVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIH 140

Query: 970  LNIEPDNVVMASVRSVQVKLIDLG-CTQ---RVTKLGTLIHPINTPNPEFAAPEVLAEEP 1025
             +I+ D++++      +VKL D G C Q    V K  +L+       P + APEV++  P
Sbjct: 141  RDIKSDSILLT--LDGRVKLSDFGFCAQISKDVPKRKSLVG-----TPYWMAPEVISRTP 193

Query: 1026 IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
               + D+WS G++   ++ G  P+   S
Sbjct: 194  YGTEVDIWSLGIMVIEMVDGEPPYFSDS 221

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 54.7 bits (131), Expect = 1e-07
 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 11/100 (11%)

Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ---RVTKLGTLIHPIN 1009
            SVL  L YLH +G+ H +I+ D++++ S    ++KL D G C Q    V K  +L+    
Sbjct: 126  SVLRALSYLHNQGVIHRDIKSDSILLTS--DGRIKLSDFGFCAQVSKEVPKRKSLVG--- 180

Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
               P + APEV++  P   + D+WS G++   ++ G  P+
Sbjct: 181  --TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 218

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 54.6 bits (131), Expect = 1e-07
 Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 15/155 (9%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAK------VMTGKGNQYKSLFKNELDIMNQLCHRNLV 243
           ++GRG    VY A      +  A K      +M  K  Q     K E+D++ QL H N++
Sbjct: 9   KIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQ--DCVK-EIDLLKQLNHPNVI 65

Query: 244 RLHDSYETKDSFTIISELAGGGEL----LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           +  DS+   +   I+ ELA  G+L     +   ++    E  +  Y  QL S +++MH  
Sbjct: 66  KYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR 125

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            + H  + P ++ +   G   + L D GL R  +S
Sbjct: 126 RVMHRDIKPANVFITATG--VVKLGDLGLGRFFSS 158

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 54.8 bits (132), Expect = 1e-07
 Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 7/101 (6%)

Query: 962  LHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVL 1021
            +H  G  H +I+PDNV++   ++  ++L D G   R+   GT+   +    P++ +PE+L
Sbjct: 118  VHQLGYVHRDIKPDNVLLD--KNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEIL 175

Query: 1022 -AEEP----IFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
             A E       P+ D WS GV  Y +L G +PF  +S  ET
Sbjct: 176  QAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 216

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 54.2 bits (130), Expect = 1e-07
 Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 7/147 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           LG+G  G V     R++G+ YA K +  K     + +++  NE  I+ ++  R +V L  
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAY 67

Query: 248 SYETKDSFTIISELAGGGELLHSLTR--QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
           +YETKD+  ++  +  GG+L   +       + E     Y  +L  GL+ + R  I +  
Sbjct: 68  AYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRD 127

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L P ++L+   G  H+ ++D GL+ +I
Sbjct: 128 LKPENILLDDRG--HIRISDLGLAVQI 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 54.4 bits (131), Expect = 2e-07
 Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GG+L   L+++  +TE D+  Y+ +L   LD++H L I +  L P ++L+   G  H+ L
Sbjct: 82  GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKL 139

Query: 524 TDFGLSR 530
           TDFGLS+
Sbjct: 140 TDFGLSK 146

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 54.3 bits (130), Expect = 2e-07
 Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 19/102 (18%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTKLGTLIHP 1007
            L  L++LH   + H +I+ DNV++    SV  KL D G C Q       R T +GT    
Sbjct: 125  LQALEFLHANQVIHRDIKSDNVLLGMDGSV--KLTDFGFCAQITPEQSKRSTMVGT---- 178

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
                 P + APEV+  +   P+ D+WS G++A  ++ G  P+
Sbjct: 179  -----PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 54.3 bits (131), Expect = 2e-07
 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 7/80 (8%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV--NFVRYRFEYLFKE 1201
            APE+L+ +P  P  D W+ GVL Y +L+G SPF G  E E  Q++  + VRY      + 
Sbjct: 164  APEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP-----RW 218

Query: 1202 LTQEATRFLMLIFKRAPGKR 1221
            L++EA   L     + P KR
Sbjct: 219  LSKEAKSILKSFLTKNPEKR 238

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 54.5 bits (131), Expect = 2e-07
 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 5/103 (4%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
            V   L +LH  G+ + +++ DN+++ +      KL D G C + +    T      TP  
Sbjct: 105  VTLALMFLHRHGVIYRDLKLDNILLDA--EGHCKLADFGMCKEGILNGVTTTTFCGTP-- 160

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
            ++ APE+L E    P  D W+ GVL Y +++G  PF   +E +
Sbjct: 161  DYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD 203

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 53.8 bits (129), Expect = 2e-07
 Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 11/156 (7%)

Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-------QYKSLFKNELDIMNQLCHR 240
           G+ LG+G  G VY  +  + G+  A K +    +       +Y+ L + E+D++  L H 
Sbjct: 5   GEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKL-QEEVDLLKSLKHV 62

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           N+V+   +    ++ +I  E   GG +   L R     E     Y +Q+L G+ Y+H   
Sbjct: 63  NIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC 122

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           + H  +   ++++  P G  + L DFG +RR+   G
Sbjct: 123 VVHRDIKGNNVMLM-PNGI-IKLIDFGCARRLAWVG 156

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 53.9 bits (129), Expect = 2e-07
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 6/109 (5%)

Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGEL----LHSLTRQSYYTEYDIAHY 285
           E+D++ QL H N+++ + S+   +   I+ ELA  G+L     H   ++    E  +  Y
Sbjct: 52  EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKY 111

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             QL S L++MH   + H  + P ++ +   G   + L D GL R  +S
Sbjct: 112 FVQLCSALEHMHSRRVMHRDIKPANVFITATG--VVKLGDLGLGRFFSS 158

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 54.0 bits (130), Expect = 2e-07
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 8/151 (5%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD 247
           ++LG G    VY    R++G   A K +     +   S    E+ +M +L H N+VRLHD
Sbjct: 6   EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHD 65

Query: 248 SYETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
              T++   ++ E       + + +   +       +  +  QLL G+ + H   + H  
Sbjct: 66  VIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRD 125

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           L P +LL+   G   L L DFGL+R   +FG
Sbjct: 126 LKPQNLLINKRG--ELKLADFGLAR---AFG 151

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 54.3 bits (131), Expect = 2e-07
 Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 32/177 (18%)

Query: 173 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK--------VMTGKGNQYK 224
            V +R KPI       + +G G  G+V  A++  SG+  A K            K    +
Sbjct: 2   DVGSRYKPI-------ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAK----R 50

Query: 225 SLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI----ISELAGGG--ELLHSLTRQSYYT 278
           +L   EL I+    H N++ + D      +       + +L       ++HS   Q    
Sbjct: 51  TL--RELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHS--DQPLTE 106

Query: 279 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
           E+ I +++ QLL GL Y+H  ++ H  L P +LLV       L + DFG++R ++S 
Sbjct: 107 EH-IRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDC--ELRIGDFGMARGLSSS 160

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 53.5 bits (128), Expect = 2e-07
 Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 4/146 (2%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           + +G+G  G V+  ++  + +  A K++   +        + E+ +++Q     + + + 
Sbjct: 10  ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 69

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           SY       II E  GGG  L  L R   + E+ IA  ++++L GLDY+H     H  + 
Sbjct: 70  SYLKGTKLWIIMEYLGGGSAL-DLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 128

Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
             ++L++  G   + L DFG++ ++T
Sbjct: 129 AANVLLSEQG--DVKLADFGVAGQLT 152

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 53.9 bits (129), Expect = 2e-07
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 10/120 (8%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
            +  +  LH+    H +I+PDNV++    +  ++L D G   ++ + GT+   +    P++
Sbjct: 115  IHSIHQLHY---VHRDIKPDNVLLDM--NGHIRLADFGSCLKMNQDGTVQSSVAVGTPDY 169

Query: 1016 AAPEVL-AEEPIF----PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
             +PE+L A E       P+ D WS GV  Y +L G +PF  +S  ET   +     RF++
Sbjct: 170  ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF 229

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 53.3 bits (128), Expect = 2e-07
 Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAA---------KVMTGKGNQYKSLFK--NELDI 233
           Y   + LG G  G VY   ++++G+N  A              K  + KS+    +E+ I
Sbjct: 2   YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTI 61

Query: 234 M-NQLCHRNLVRLHDSYETKDSFTIISELAGG---GELLHSLT-RQSYYTEYDIAHYIRQ 288
           +  QL H N+VR + ++   D   I+ +L  G   GE  +SL  ++  +TE  I +   Q
Sbjct: 62  IKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQ 121

Query: 289 LLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
           ++  L Y+H+   I H  LTP ++++       + +TDFGL+++
Sbjct: 122 MVLALRYLHKEKRIVHRDLTPNNIMLGE--DDKVTITDFGLAKQ 163

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 52.2 bits (126), Expect = 3e-07
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 8/105 (7%)

Query: 604 IHRGKFSVVVKAAEKANTENLVAAKLF--EYSHDTLHQVNTEFDNLRSLRHERIASLLEA 661
           +  G F  V  A     T   VA K+   E S   L ++  E + L+ L H  I  L   
Sbjct: 1   LGEGGFGTVYLA-RDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGV 59

Query: 662 YKPSTTASNIAVLVMEKLQGADVLSYLSSRH-EYTEQNVATIISQ 705
           ++     +++  LVME  +G  +   L     + +E  +  I+ Q
Sbjct: 60  FE---DENHL-YLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQ 100

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 53.1 bits (128), Expect = 3e-07
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 20/107 (18%)

Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVK-------LIDLGCTQ---RVTKLGT 1003
             VL GL+YLH  G  H +I+  N+++    SV++        L D G      R T +GT
Sbjct: 110  EVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGT 169

Query: 1004 LIHPINTPNPEFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPF 1049
                     P + APEV+ +   +    D+WS G+ A  L +GA+P+
Sbjct: 170  ---------PCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPY 207

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 53.3 bits (129), Expect = 3e-07
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 467 LLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
           LL S   +  +TE  I  Y++QLL GL Y+H   I H  +   ++L+ + G   L L DF
Sbjct: 89  LLDS--PEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDG--VLKLADF 144

Query: 527 GLSRRITS 534
           GL+R  T 
Sbjct: 145 GLARPYTK 152

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 53.1 bits (127), Expect = 3e-07
 Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 4/108 (3%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            +L GL+ LH     + +++P+N+++     +++   DLG   ++ +  ++   + T    
Sbjct: 111  ILCGLEDLHRENTVYRDLKPENILLDDYGHIRIS--DLGLAVKIPEGESIRGRVGTVG-- 166

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
            + APEVL  +      D W  G L Y ++ G SPFRG+ E   R+ V+
Sbjct: 167  YMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVD 214

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 53.5 bits (128), Expect = 3e-07
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 15/143 (10%)

Query: 942  IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTK 1000
            +P  H   Y     L  L YLH RG+ + +++ DNV++ S     +KL D G C + +  
Sbjct: 93   LPEEHARFYSAEISL-ALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRP 149

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFR--GQSEPETR 1058
              T      TPN  + APE+L  E      D W+ GVL + +++G SPF   G S+    
Sbjct: 150  GDTTSTFCGTPN--YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD-NPD 206

Query: 1059 QNVNFVRYRFEYLFKELTQEATR 1081
            QN        +YLF+ + ++  R
Sbjct: 207  QNTE------DYLFQVILEKQIR 223

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 53.6 bits (127), Expect = 4e-07
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)

Query: 466 ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTD 525
           +LL  + R+   +E +    + Q+LS L+Y+H   I H  + P ++L+    GR + L D
Sbjct: 87  DLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILL-DRDGRVVKLID 145

Query: 526 FGLSRRITSFGKLNPLEY 543
           FGL++ +   G  + +  
Sbjct: 146 FGLAKLLPDPGSTSSIPA 163

Length = 384

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 53.1 bits (127), Expect = 4e-07
 Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 20/110 (18%)

Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFTIISE---------LAGGGELLHSLTRQSYYTEY 280
           E+ ++  L H N+V LHD   T+ S T++ E         L   G  ++          +
Sbjct: 54  EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINM---------H 104

Query: 281 DIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           ++  ++ QLL GL+Y HR  + H  L P +LL+   G   L L DFGL+R
Sbjct: 105 NVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG--ELKLADFGLAR 152

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 53.3 bits (128), Expect = 4e-07
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 18/143 (12%)

Query: 214 KVMTGKGNQYKSLFKNELDIMNQLCH----RNL---------VRLHDSYETKDSFTIISE 260
           K  TGK    K+L K+E+   +QL H    R++         V L+ S++      +I E
Sbjct: 22  KKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81

Query: 261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 320
              GG+L+  L +   ++E     Y+ + +  ++ +H+L   H  + P ++L+   G  H
Sbjct: 82  FLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGG--H 139

Query: 321 LLLTDFGLSRRITSFGKLNPLEY 343
           + L+DFGLS   T F K +   Y
Sbjct: 140 IKLSDFGLS---TGFHKQHDSAY 159

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 52.8 bits (126), Expect = 5e-07
 Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNPE 1014
            L  L++LH   + H +I+ DN+++    SV  KL D G C Q   +       + TP   
Sbjct: 126  LQALEFLHSNQVIHRDIKSDNILLGMDGSV--KLTDFGFCAQITPEQSKRSTMVGTP--Y 181

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            + APEV+  +   P+ D+WS G++A  ++ G  P+
Sbjct: 182  WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 52.3 bits (126), Expect = 5e-07
 Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 8/105 (7%)

Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI---NT 1010
             +L+GL YLH  G+ H +I+P N+ +     V +KL D GC  ++    T +        
Sbjct: 107  QLLEGLAYLHSHGIVHRDIKPANIFLDH-NGV-IKLGDFGCAVKLKNNTTTMGEEVQSLA 164

Query: 1011 PNPEFAAPEVLAEEPI---FPQTDVWSAGVLAYVLLSGASPFRGQ 1052
              P + APEV+            D+WS G +   + +G  P+   
Sbjct: 165  GTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSEL 209

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 52.7 bits (126), Expect = 5e-07
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 4/102 (3%)

Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQ 288
           E+ ++  L H N+V LHD   T+   T++ E     +L   L    +  + +++  ++ Q
Sbjct: 53  EVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQ 111

Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           LL GL Y H+  I H  L P +LL+   G   L L DFGL+R
Sbjct: 112 LLRGLSYCHKRKILHRDLKPQNLLINEKG--ELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 53.2 bits (128), Expect = 5e-07
 Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 21/156 (13%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAK--VMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHD- 247
           LG G  G+V+ AV+    +  A K  V+T      K   + E+ I+ +L H N+V++++ 
Sbjct: 13  LGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALR-EIKIIRRLDHDNIVKVYEV 70

Query: 248 ----SYETKDSFTIISELAG---GGEL----LHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
                 +  +    ++EL       E     L ++  Q   +E     ++ QLL GL Y+
Sbjct: 71  LGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYI 130

Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLT--DFGLSR 330
           H  ++ H  L P ++ +       L+L   DFGL+R
Sbjct: 131 HSANVLHRDLKPANVFI---NTEDLVLKIGDFGLAR 163

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 52.4 bits (125), Expect = 5e-07
 Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)

Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM-----TGKGNQYKSLFKNELDIMNQLCHRNL 242
           G  LG+G  G VY   +  +GR  AAK +     + + ++  S  + E+ ++  L H  +
Sbjct: 7   GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERI 66

Query: 243 VR----LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           V+    L D  E   + TI  E   GG +   L      TE     Y RQ+L G+ Y+H 
Sbjct: 67  VQYYGCLRDRAEK--TLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHS 124

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             I H  +   ++L    G  ++ L DFG S+R+ +
Sbjct: 125 NMIVHRDIKGANILRDSAG--NVKLGDFGASKRLQT 158

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 53.0 bits (127), Expect = 5e-07
 Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 19/110 (17%)

Query: 943  PTTHKDAYCVT-SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
            P     A  +   +L+GL+YLH + + H +++ +N+ +  V   QV + DLG  Q     
Sbjct: 153  PLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVD--QVCIGDLGAAQ----- 205

Query: 1002 GTLIHPINTPN-------PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS 1044
                 P+  P         E  APEVLA +    + D+WSAG++ + +L+
Sbjct: 206  ----FPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLA 251

Length = 357

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 52.2 bits (126), Expect = 5e-07
 Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 4/146 (2%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
            +G+G  G VY A+++ + +  A KV+   +        + E+  ++Q     + + + S
Sbjct: 8   CIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGS 67

Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
           +       II E  GGG  L  L +     E  IA  +R++L GL+Y+H     H  +  
Sbjct: 68  FLKGSKLWIIMEYCGGGSCLD-LLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKA 126

Query: 309 GDLLVAHPGGRHLLLTDFGLSRRITS 334
            ++L++  G   + L DFG+S ++TS
Sbjct: 127 ANILLSEEG--DVKLADFGVSGQLTS 150

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 52.3 bits (125), Expect = 6e-07
 Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 6/102 (5%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHP 1007
            A C+ +VL  L  LH +G+ H +I+ D++++      +VKL D G C Q   ++      
Sbjct: 120  AVCL-AVLKALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKEVPRRKSL 176

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            + TP   + APE+++  P  P+ D+WS G++   ++ G  P+
Sbjct: 177  VGTP--YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 52.3 bits (126), Expect = 6e-07
 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 4/71 (5%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNT---EFDNLRSLRH 652
           +KY+ +  +  G + VV+K   KA T  +VA K F+ S D      T   E   LR LRH
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNKA-TGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRH 59

Query: 653 ERIASLLEAYK 663
           E I +L EA++
Sbjct: 60  ENIVNLKEAFR 70

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 52.4 bits (125), Expect = 6e-07
 Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 4/146 (2%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           + +G+G  G VY  ++  +    A K++   +        + E+ +++Q     + R + 
Sbjct: 10  ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYG 69

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           SY       II E  GGG  L  L +     E  IA  +R++L GLDY+H     H  + 
Sbjct: 70  SYLKGTKLWIIMEYLGGGSAL-DLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIK 128

Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
             ++L++  G   + L DFG++ ++T
Sbjct: 129 AANVLLSEQG--DVKLADFGVAGQLT 152

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 52.9 bits (127), Expect = 6e-07
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 209 RNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELL 268
           RN AA V            K E DI+ +  +  +V+L+ S++ KD+   + +   GG+++
Sbjct: 42  RNQAAHV------------KAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMM 89

Query: 269 HSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL 328
             L R   + E     YI +L   ++ +H++   H  + P ++L+   G  H+ LTDFGL
Sbjct: 90  SLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLTDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 51.8 bits (125), Expect = 8e-07
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APEVL  +      D WS GVL Y +L+G  PF  +   E  + +     RF    + L+
Sbjct: 161  APEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFP---EFLS 217

Query: 1204 QEATRFLMLIFKRAPGKR 1221
             EA   +  + ++ P KR
Sbjct: 218  PEARDLISGLLQKDPTKR 235

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 52.0 bits (124), Expect = 8e-07
 Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 19/102 (18%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTKLGTLIHP 1007
            L  L +LH   + H +I+ DN+++    SV  KL D G C Q       R T +GT    
Sbjct: 125  LQALDFLHSNQVIHRDIKSDNILLGMDGSV--KLTDFGFCAQITPEQSKRSTMVGT---- 178

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
                 P + APEV+  +   P+ D+WS G++A  ++ G  P+
Sbjct: 179  -----PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 52.4 bits (126), Expect = 8e-07
 Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 8/161 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRNLVRLHD 247
           +GRG  G V    ++ +G  YA K +       K      + E DI+ +  +  +V+L+ 
Sbjct: 9   IGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYY 68

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           S++ ++   +I E   GG+++  L ++  +TE +   YI + +  +D +H+L   H  + 
Sbjct: 69  SFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIK 128

Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYV 348
           P +LL+   G  H+ L+DFGL    T   K +  E+     
Sbjct: 129 PDNLLLDAKG--HIKLSDFGLC---TGLKKSHRTEFYRILS 164

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 52.0 bits (125), Expect = 8e-07
 Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 11/147 (7%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHRNLVRLHDS 248
           LG G  G V     +++G  +A K +T   N    K + + EL+I        +V+ + +
Sbjct: 9   LGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILR-ELEINKSCKSPYIVKYYGA 67

Query: 249 Y--ETKDSFTIISELAGGGEL----LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
           +  E+  S  I  E   GG L         R     E  +      +L GL Y+H   I 
Sbjct: 68  FLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKII 127

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           H  + P ++L+   G   + L DFG+S
Sbjct: 128 HRDIKPSNILLTRKG--QVKLCDFGVS 152

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 52.0 bits (125), Expect = 8e-07
 Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 13/110 (11%)

Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT-QRVTKL-GTLIHPINTP 1011
            SVL GL YLH R + H +I+P N+++   R  QVKL D G + + V  L GT      T 
Sbjct: 113  SVLKGLSYLHSRKIIHRDIKPSNILLT--RKGQVKLCDFGVSGELVNSLAGTF-----TG 165

Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
               + APE +  +P    +DVWS G+    +     PF     PE    +
Sbjct: 166  TSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPF----PPEGEPPL 211

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 51.8 bits (124), Expect = 9e-07
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 7/100 (7%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINT---- 1010
            +LDG+ YLH   + H +I+ +NV++  + +  +KLID GC +R+  +G      N     
Sbjct: 111  ILDGVAYLHNNCVVHRDIKGNNVML--MPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSM 168

Query: 1011 -PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
               P + APEV+ E     ++D+WS G   + + +G  P 
Sbjct: 169  HGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPL 208

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 51.5 bits (123), Expect = 9e-07
 Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 5/152 (3%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNL 242
           Y+   ++G G  G +Y A  +S   +   K   +T    + K   K E+ ++ ++ H N+
Sbjct: 2   YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNI 61

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLS 300
           V    S++      I+ E   GG+L+  + RQ    ++E  I  +  Q+  GL ++H   
Sbjct: 62  VTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK 121

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           I H  +   ++ ++   G    L DFG++R++
Sbjct: 122 ILHRDIKSQNIFLSK-NGMVAKLGDFGIARQL 152

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 51.2 bits (123), Expect = 1e-06
 Identities = 37/135 (27%), Positives = 52/135 (38%), Gaps = 18/135 (13%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGC-------TQRVTKLGTLIHPINT 1010
             L+YLH +G+ H +I+PDN+++       V + D          T   +  GT       
Sbjct: 112  ALEYLHSKGIIHRDIKPDNILLDE--QGHVHITDFNIATKVTPDTLTTSTSGT------- 162

Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
              P + APEVL  +      D WS GV AY  L G  P+RG S     Q           
Sbjct: 163  --PGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVL 220

Query: 1071 LFKELTQEATRFLML 1085
                 + EA   +  
Sbjct: 221  YPATWSTEAIDAINK 235

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 51.5 bits (123), Expect = 1e-06
 Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE+L  +      D WS GVL Y +L G SPF G  E E  Q+   +R       + LT
Sbjct: 164  APEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS---IRMDNPCYPRWLT 220

Query: 1204 QEATRFLMLIFKRAPGKR 1221
            +EA   L+ +F R P +R
Sbjct: 221  REAKDILVKLFVREPERR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 51.6 bits (124), Expect = 1e-06
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 6/100 (6%)

Query: 962  LHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVL 1021
            LH  G  H +++P+N ++    S  +KL D G ++ +    T  + +   +P++ APEVL
Sbjct: 117  LHELGYIHRDLKPENFLID--ASGHIKLTDFGLSKGIV---TYANSV-VGSPDYMAPEVL 170

Query: 1022 AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
              +      D WS G + Y  L G  PF G +  ET +N+
Sbjct: 171  RGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENL 210

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 51.9 bits (124), Expect = 1e-06
 Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 2/101 (1%)

Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQL 289
           E+ ++  L H N+V LHD   T  S T++ E        +     +  + +++  ++ Q+
Sbjct: 54  EVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQI 113

Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           L GL Y HR  + H  L P +LL+   G   L L DFGL+R
Sbjct: 114 LRGLAYCHRRKVLHRDLKPQNLLINERG--ELKLADFGLAR 152

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 51.9 bits (125), Expect = 1e-06
 Identities = 42/177 (23%), Positives = 68/177 (38%), Gaps = 49/177 (27%)

Query: 185 YDFGDELGRGVTGIVYHAV--ERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCH 239
           Y+    +GRG  G VY A       G+ YA K   G   QY  + ++   E+ ++ +L H
Sbjct: 2   YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH 61

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY----YTEYDIAHYIR-------- 287
            N+V L +                    L    +  Y    Y E+D+   I+        
Sbjct: 62  ENVVSLVEV------------------FLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRV 103

Query: 288 ------------QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH--LLLTDFGLSR 330
                       Q+L+G+ Y+H   + H  L P ++LV   G     + + D GL+R
Sbjct: 104 SIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR 160

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 51.0 bits (122), Expect = 1e-06
 Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 7/147 (4%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           +LG G  G VY  V +      A K +     + +   K E  +M ++ H NLV+L    
Sbjct: 13  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVC 71

Query: 250 ETKDSFTIISELAGGGELLHSLTR--QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
             +  F II+E    G LL  L    +       + +   Q+ S ++Y+ + +  H  L 
Sbjct: 72  TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 131

Query: 308 PGDLLVAHPGGRHLL-LTDFGLSRRIT 333
             + LV   G  HL+ + DFGLSR +T
Sbjct: 132 ARNCLV---GENHLVKVADFGLSRLMT 155

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 50.2 bits (121), Expect = 2e-06
 Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 23/114 (20%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG----------CTQRVTKLGTLIHP 1007
             L+YLH R + H +I+P N+ + S  +  VKL D G            +  T +GT    
Sbjct: 115  ALKYLHSRKILHRDIKPQNIFLTS--NGLVKLGDFGISKVLSSTVDLAK--TVVGT---- 166

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
                 P + +PE+   +P   ++D+WS G + Y L +   PF G++  E    +
Sbjct: 167  -----PYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKI 215

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 50.3 bits (121), Expect = 2e-06
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 11/102 (10%)

Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT----KLGTLIHPIN 1009
              L GL+YLH     H +I+  N+++      Q KL D G + ++T    K  T+I    
Sbjct: 107  QTLKGLEYLHSNKKIHRDIKAGNILLNE--EGQAKLADFGVSGQLTDTMAKRNTVIG--- 161

Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
               P + APEV+ E     + D+WS G+ A  +  G  P+  
Sbjct: 162  --TPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSD 201

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 50.6 bits (121), Expect = 2e-06
 Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 6/147 (4%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
             +    +L+GL+YLH   + H +I+ DNV++ +   V VK+ D G ++R+  +       
Sbjct: 111  IFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGV-VKISDFGTSKRLAGINPCTETF 169

Query: 1009 NTPNPEFAAPEVLAEEP--IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ-NVNFVR 1065
             T   ++ APEV+ + P       D+WS G     + +G  PF    EP+     V   +
Sbjct: 170  -TGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK 228

Query: 1066 YRFEYLFKELTQEATRFLMLIFKHEVD 1092
               E + + L+ EA  F++  F+ + D
Sbjct: 229  IHPE-IPESLSAEAKNFILRCFEPDPD 254

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 50.9 bits (122), Expect = 2e-06
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE+L  +      D WS GVL Y +L G SPF G+ E E   +   +     +  + ++
Sbjct: 164  APEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDS---ILNDRPHFPRWIS 220

Query: 1204 QEATRFLMLIFKRAPGKR 1221
            +EA   L  +F+R P KR
Sbjct: 221  KEAKDCLSKLFERDPTKR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 50.7 bits (121), Expect = 2e-06
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GGEL H L R+  +       Y  +LL  L+ +H+ ++ +  L P ++L+ + G  H+ L
Sbjct: 77  GGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQG--HIAL 134

Query: 524 TDFGLSR 530
            DFGL +
Sbjct: 135 CDFGLCK 141

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 50.4 bits (121), Expect = 2e-06
 Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 9/146 (6%)

Query: 190 ELGRGVTGIVYHAVERS-SGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRNLVRL 245
           ELG G  G V   V    SG+     V T K     +    F  E  +M QL H  +VRL
Sbjct: 2   ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRL 61

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
               +  +   ++ ELA  G LL  L ++      D+     Q+  G+ Y+      H  
Sbjct: 62  IGVCKG-EPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRD 120

Query: 306 LTPGDLLVAHPGGRHLL-LTDFGLSR 330
           L   ++L+ +   RH   ++DFG+SR
Sbjct: 121 LAARNVLLVN---RHQAKISDFGMSR 143

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 51.0 bits (122), Expect = 2e-06
 Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)

Query: 942  IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTK 1000
            +P  H   Y     L  L +LH RG+ + +++ DNV++ +     +KL D G C + +  
Sbjct: 93   LPEEHARFYSAEISL-ALNFLHERGIIYRDLKLDNVLLDA--EGHIKLTDYGMCKEGIRP 149

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFR-GQSEPETRQ 1059
              T      TPN  + APE+L  E      D W+ GVL + +++G SPF          Q
Sbjct: 150  GDTTSTFCGTPN--YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQ 207

Query: 1060 NVNFVRYRFEYLFKELTQEATR 1081
            N        +YLF+ + ++  R
Sbjct: 208  NTE------DYLFQVILEKQIR 223

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 50.9 bits (122), Expect = 2e-06
 Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 25/125 (20%)

Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            Y   +VL  L+YLH  G+ H +++PDN+++ S+    +KL D G    ++K+G +    N
Sbjct: 106  YFAETVL-ALEYLHNYGIVHRDLKPDNLLITSMG--HIKLTDFG----LSKIGLMSLTTN 158

Query: 1010 T------------------PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
                                 PE+ APEV+  +      D W+ G++ Y  L G  PF G
Sbjct: 159  LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG 218

Query: 1052 QSEPE 1056
             +  E
Sbjct: 219  DTPEE 223

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 50.9 bits (122), Expect = 2e-06
 Identities = 49/159 (30%), Positives = 71/159 (44%), Gaps = 16/159 (10%)

Query: 185 YDFGDELGRGVTGIVYHA--VERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQL-C 238
           Y+   ELG+G  GIV  A   E S     A K +T   ++ K L K    EL ++     
Sbjct: 2   YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK-KILAKRALRELKLLRHFRG 60

Query: 239 HRNLVRLHD----SYETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQLLSGL 293
           H+N+  L+D         +   +  EL      LH + R     T+     +I Q+L GL
Sbjct: 61  HKNITCLYDMDIVFPGNFNELYLYEELMEAD--LHQIIRSGQPLTDAHFQSFIYQILCGL 118

Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            Y+H  ++ H  L PG+LLV       L + DFGL+R  
Sbjct: 119 KYIHSANVLHRDLKPGNLLVNADC--ELKICDFGLARGF 155

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 49.9 bits (120), Expect = 3e-06
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
           TE  IA+  ++LL GL+Y+H   I H  +   ++L+   G   + L DFGLS +++ 
Sbjct: 96  TESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDG--EVKLIDFGLSAQLSD 150

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 50.4 bits (120), Expect = 3e-06
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 5/108 (4%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
            +   L YLH   + + +++P+N+++ S     + L D G C + +   GT      TP  
Sbjct: 105  IASALGYLHSLNIVYRDLKPENILLDS--QGHIVLTDFGLCKENIEHNGTTSTFCGTP-- 160

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            E+ APEVL ++P     D W  G + Y +L G  PF  ++  E   N+
Sbjct: 161  EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI 208

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 50.1 bits (120), Expect = 3e-06
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APEV    P   ++D+WS G L Y + + A PF  +S  + R  V   R ++  +    +
Sbjct: 169  APEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKV--QRGKYPPIPPIYS 226

Query: 1204 QEATRFLMLIFKRAPGKRPTVEE 1226
            Q+   F+  + +  P  RP  ++
Sbjct: 227  QDLQNFIRSMLQVKPKLRPNCDK 249

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 50.5 bits (121), Expect = 3e-06
 Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 16/100 (16%)

Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-----TKLGTLIHPINTPNP 1013
            L+YLH + + + +++P+N+++   +   +KL D G  +++     T  GT         P
Sbjct: 114  LEYLHSKEIVYRDLKPENILLD--KEGHIKLTDFGFAKKLRDRTWTLCGT---------P 162

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
            E+ APEV+  +      D W+ G+L Y +L G  PF   +
Sbjct: 163  EYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN 202

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 50.2 bits (120), Expect = 3e-06
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 16/139 (11%)

Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
            L++LH +G+ + +++P+N+++ +     VKL D G  +     GT+ H       E+ AP
Sbjct: 113  LEHLHQQGIIYRDLKPENILLDA--QGHVKLTDFGLCKESIHEGTVTHTF-CGTIEYMAP 169

Query: 1019 EVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET-----RQNVNFVRYRFEYLFK 1073
            E+L         D WS G L Y +L+GA PF  ++  +T     +  +N   Y       
Sbjct: 170  EILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPY------- 222

Query: 1074 ELTQEATRFLMLIFKHEVD 1092
             LT EA   L  + K    
Sbjct: 223  -LTPEARDLLKKLLKRNPS 240

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 50.8 bits (121), Expect = 3e-06
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE++A +P     D W+ GVL Y +L+G +PF G+ E E  Q++  + +   Y  K ++
Sbjct: 169  APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI--MEHNVAYP-KSMS 225

Query: 1204 QEATRFLMLIFKRAPGKR 1221
            +EA      +  + PGKR
Sbjct: 226  KEAVAICKGLMTKHPGKR 243

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 50.4 bits (120), Expect = 3e-06
 Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 13/163 (7%)

Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HR 240
           +D ++  + +G+G  G V+  + + +G   A K++    +  + + + E +I+  L  H 
Sbjct: 17  SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEI-EAEYNILKALSDHP 75

Query: 241 NLVRLHDSYETKDSFT-----IISELAGGGELLH----SLTRQSYYTEYDIAHYIRQLLS 291
           N+V+ +  Y  KD        ++ EL  GG +       L R     E  IA+ + + L 
Sbjct: 76  NVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALM 135

Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           GL ++H     H  +   ++L+   GG  + L DFG+S ++TS
Sbjct: 136 GLQHLHVNKTIHRDVKGNNILLTTEGG--VKLVDFGVSAQLTS 176

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 50.4 bits (120), Expect = 3e-06
 Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 6/108 (5%)

Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +    V+  L  +H  G  H +++PDN+++   +S  +KL D G   ++ K G +     
Sbjct: 146  FYTAEVVLALDAIHSMGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNKEGMVRCDTA 203

Query: 1010 TPNPEFAAPEVLAEEP----IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
               P++ +PEVL  +        + D WS GV  Y +L G +PF   S
Sbjct: 204  VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 251

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 49.9 bits (120), Expect = 4e-06
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGGEL   L +   + E     Y  Q++  L+Y+H L I +  L P +LL+   G  ++ 
Sbjct: 84  PGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG--YIK 141

Query: 523 LTDFGLSRRI 532
           +TDFG ++R+
Sbjct: 142 ITDFGFAKRV 151

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 49.4 bits (118), Expect = 4e-06
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG+    +       E     YI +++ G++ +H+  I H  + P +LL+   G  HL 
Sbjct: 80  NGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTG--HLK 137

Query: 523 LTDFGLSR 530
           LTDFGLSR
Sbjct: 138 LTDFGLSR 145

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 50.2 bits (120), Expect = 4e-06
 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GGEL   L R+  + E     Y  ++ S L Y+H L+I +  L P ++L+   G  H++L
Sbjct: 80  GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG--HVVL 137

Query: 524 TDFGLSR 530
           TDFGL +
Sbjct: 138 TDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 50.0 bits (120), Expect = 4e-06
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 4/78 (5%)

Query: 463 PGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
           PGGEL   L RQ     +E     Y  ++L  L+Y+H L I +  L P ++L+   G  H
Sbjct: 84  PGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESG--H 141

Query: 521 LLLTDFGLSRRITSFGKL 538
           ++L+DF LS++       
Sbjct: 142 IMLSDFDLSKQSDVEPPP 159

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 50.5 bits (121), Expect = 4e-06
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 6/103 (5%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            V+  L  +H  G  H +++PDN+++   +S  +KL D G   ++   G +        P+
Sbjct: 151  VVLALDAIHSMGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMDANGMVRCDTAVGTPD 208

Query: 1015 FAAPEVLAEEPIFPQ----TDVWSAGVLAYVLLSGASPFRGQS 1053
            + +PEVL  +          D WS GV  Y +L G +PF   S
Sbjct: 209  YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 251

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 50.0 bits (119), Expect = 4e-06
 Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 13/163 (7%)

Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HR 240
           TD ++  + +G+G  G VY    +  G   A K++    +  + + + E +I+  L  H 
Sbjct: 21  TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEI-EAEYNILQSLPNHP 79

Query: 241 NLVRLHDSYETKDSFT-----IISELAGGG---ELLHSLTRQSY-YTEYDIAHYIRQLLS 291
           N+V+ +  +   D        ++ EL  GG   EL+  L        E  I++ +   L 
Sbjct: 80  NVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALL 139

Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           GL ++H   I H  +   ++L+   GG  + L DFG+S ++TS
Sbjct: 140 GLQHLHNNRIIHRDVKGNNILLTTEGG--VKLVDFGVSAQLTS 180

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 49.5 bits (119), Expect = 5e-06
 Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 477 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
            T  DI  Y+   L GL+Y+H   I H  L P +LL+A   G  L L DFGL+R   S
Sbjct: 99  LTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA-SDGV-LKLADFGLARSFGS 154

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 49.6 bits (119), Expect = 5e-06
 Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)

Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
            E  +  Y+R LL G+ YMH   I H  L P +LL++  G   L + DFGL+R
Sbjct: 97  PEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG--VLKIADFGLAR 147

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 49.6 bits (119), Expect = 5e-06
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
           I   +RQLL G+D++H   I H  L P ++LV   G   + + DFGL+R
Sbjct: 109 IKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDG--QVKIADFGLAR 155

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 49.8 bits (119), Expect = 5e-06
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 13/83 (15%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE-----TRQNVNFVRYRFEYL 1198
            APE++A +P     D W+ GVL Y +L+G  PF G+ E E        NV++        
Sbjct: 169  APEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP------- 221

Query: 1199 FKELTQEATRFLMLIFKRAPGKR 1221
             K L++EA      +  + P KR
Sbjct: 222  -KSLSKEAVSICKGLLTKHPAKR 243

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 50.6 bits (121), Expect = 5e-06
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GG++   L    Y+ E     YI ++   LDY+HR  I H  L P ++L+++ G  H+ L
Sbjct: 88  GGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEG--HIKL 145

Query: 524 TDFGLSR 530
           TDFGLS+
Sbjct: 146 TDFGLSK 152

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 49.4 bits (118), Expect = 5e-06
 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 4/104 (3%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
            GL++LH R + + +++P+NV++    +V++   DLG    + K G  I       P + A
Sbjct: 107  GLEHLHQRRIVYRDLKPENVLLDDHGNVRIS--DLGLAVEL-KGGKKIKG-RAGTPGYMA 162

Query: 1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            PEVL  E      D ++ G   Y +++G SPFR + E   ++ +
Sbjct: 163  PEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEEL 206

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 49.1 bits (118), Expect = 6e-06
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE--YLFKE 1201
            APEV+  E      D+WS G     + +G  P+     P     +  +    E   + + 
Sbjct: 171  APEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM--AALYKIGSSGEPPEIPEH 228

Query: 1202 LTQEATRFLMLIFKRAPGKRPTVEE 1226
            L++EA  FL    +R P KRPT +E
Sbjct: 229  LSEEAKDFLRKCLRRDPKKRPTADE 253

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 49.4 bits (118), Expect = 6e-06
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 9/154 (5%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQL 237
           IT+ Y     +G G  G+V  A ++ +G+N A K +  K      L K    EL ++  L
Sbjct: 8   ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIM-KPFSTPVLAKRTYRELKLLKHL 66

Query: 238 CHRNLVRLHDSY-ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
            H N++ L D +    +    ++EL G    LH L       +  I +++ Q+L GL Y+
Sbjct: 67  RHENIISLSDIFISPLEDIYFVTELLGTD--LHRLLTSRPLEKQFIQYFLYQILRGLKYV 124

Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           H   + H  L P ++L+       L + DFGL+R
Sbjct: 125 HSAGVVHRDLKPSNILINE--NCDLKICDFGLAR 156

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 49.0 bits (117), Expect = 6e-06
 Identities = 44/147 (29%), Positives = 60/147 (40%), Gaps = 8/147 (5%)

Query: 191 LGRGVTGIVYHAVERS-SGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLH 246
           +G G  G VY  V  S      A  V T K       +  F  E  IM Q  H ++V+L 
Sbjct: 14  IGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLI 73

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDI-AHYIRQLLSGLDYMHRLSIAHLG 305
                   + I+ ELA  GEL   L    Y  +      Y  QL + L Y+      H  
Sbjct: 74  GVITENPVW-IVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRD 132

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           +   ++LV+ P    + L DFGLSR +
Sbjct: 133 IAARNVLVSSP--DCVKLGDFGLSRYL 157

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 49.0 bits (117), Expect = 7e-06
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 19/105 (18%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG--------CTQRVTKLGTLIH 1006
            +   L+++H + + H +I+P NV + +  +  VKL DLG         T   + +GT   
Sbjct: 115  LCSALEHMHSKRIMHRDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTAAHSLVGT--- 169

Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
                  P + +PE + E     ++D+WS G L Y + +  SPF G
Sbjct: 170  ------PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 208

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 50.0 bits (119), Expect = 7e-06
 Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 30/195 (15%)

Query: 159 NENEYSYRTYARGRQVKTRT------KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYA 212
           +E E S+   A   + + +       +    +Y  G+ +G G  G+VY A+   +    A
Sbjct: 36  DEEERSHNNNAGEDEDEEKMIDNDINRSPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVA 95

Query: 213 AKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYET-------KDSF-TIISELAGG 264
            K +  +  QYK+    EL IM  L H N++ L D Y T       K+ F  ++ E    
Sbjct: 96  IKKVL-QDPQYKN---RELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFI-- 149

Query: 265 GELLHSLTRQSYYTEYD-------IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG 317
            + +H   +  +Y   +       +  Y  QL   L Y+H   I H  L P +LL+  P 
Sbjct: 150 PQTVHKYMK--HYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLI-DPN 206

Query: 318 GRHLLLTDFGLSRRI 332
              L L DFG ++ +
Sbjct: 207 THTLKLCDFGSAKNL 221

Length = 440

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 49.3 bits (117), Expect = 7e-06
 Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 28/216 (12%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLH 246
           E+G G  G VY A    +    A K M+  G Q    +++   E+  + QL H N +   
Sbjct: 28  EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYK 87

Query: 247 DSYETKDSFTIISE--LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
             Y  + +  ++ E  L    +LL     +    E +IA      L GL Y+H  ++ H 
Sbjct: 88  GCYLKEHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAITHGALQGLAYLHSHNMIHR 145

Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK---------------LNPLEYDVRYVR 349
            +  G++L+  PG   + L DFG + + +                   ++  +YD +   
Sbjct: 146 DIKAGNILLTEPG--QVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDV 203

Query: 350 QALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD 385
            +L    +  A+RKP    P  N +A+   Y++ ++
Sbjct: 204 WSLGITCIELAERKP----PLFNMNAMSALYHIAQN 235

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 48.9 bits (116), Expect = 7e-06
 Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 4/146 (2%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           +++G+G  G V+  ++  + +  A K++   +        + E+ +++Q     + + + 
Sbjct: 10  EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 69

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           SY       II E  GGG  L  L       E  IA  +R++L GLDY+H     H  + 
Sbjct: 70  SYLKDTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 128

Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
             ++L++  G   + L DFG++ ++T
Sbjct: 129 AANVLLSEHG--EVKLADFGVAGQLT 152

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 49.2 bits (117), Expect = 8e-06
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
            ++  L+YLH R + + +I+ +N+++   +   +K+ D G C + ++   T+     TP  
Sbjct: 104  IVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKTFCGTP-- 159

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
            E+ APEVL +       D W  GV+ Y ++ G  PF  Q      + +     RF    +
Sbjct: 160  EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---R 216

Query: 1074 ELTQEATRFLMLIFKHE 1090
             L+ EA   L  + K +
Sbjct: 217  TLSPEAKSLLAGLLKKD 233

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 49.2 bits (117), Expect = 8e-06
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE++A +P     D W+ GVL Y +L+G  PF G+ E E  Q++  + +   Y  K L+
Sbjct: 169  APEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI--MEHNVSYP-KSLS 225

Query: 1204 QEATRFLMLIFKRAPGKR 1221
            +EA      +  + P KR
Sbjct: 226  KEAVSICKGLMTKHPSKR 243

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 49.3 bits (117), Expect = 8e-06
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 6/109 (5%)

Query: 942  IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTK 1000
            +P  H   Y    +   L +LH RG+ + +++ DNV++ +     +KL D G C + +  
Sbjct: 93   LPEEHARFY-AAEICIALNFLHERGIIYRDLKLDNVLLDA--DGHIKLTDYGMCKEGLGP 149

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
              T      TPN  + APE+L  E      D W+ GVL + +++G SPF
Sbjct: 150  GDTTSTFCGTPN--YIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 48.8 bits (116), Expect = 8e-06
 Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 7/145 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAA----KVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +G G  G V+  + +  GR   A     +  G   + +  F +E  IM Q  H N++RL 
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE 72

Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
                     II+E    G L   L      ++ Y +   +R + +G+ Y+  ++  H  
Sbjct: 73  GVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRD 132

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSR 330
           L   ++LV         ++DFGLSR
Sbjct: 133 LAARNILVN--SNLECKVSDFGLSR 155

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 48.6 bits (116), Expect = 8e-06
 Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 11/153 (7%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVR 244
           +    +LG G  G V+  + ++  R  A K++       +  F+ E+  + +L H++L+ 
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVR-VAIKILKSDDLLKQQDFQKEVQALKRLRHKHLIS 66

Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIR---QLLSGLDYMHRLSI 301
           L       +   II+EL   G LL  L R        +A  I    Q+  G+ Y+   + 
Sbjct: 67  LFAVCSVGEPVYIITELMEKGSLLAFL-RSPEGQVLPVASLIDMACQVAEGMAYLEEQNS 125

Query: 302 AHLGLTPGDLLVAHPGGRHLL--LTDFGLSRRI 332
            H  L   ++LV    G  L+  + DFGL+R I
Sbjct: 126 IHRDLAARNILV----GEDLVCKVADFGLARLI 154

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 48.6 bits (116), Expect = 8e-06
 Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 4/108 (3%)

Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQS--YYTEYDIAHYI 286
           NE+ I++ L H N++  ++ +   ++  I  E A GG L   + RQ    + E  +  Y+
Sbjct: 48  NEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYL 107

Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            Q++S + Y+H+  I H  +   ++ +   G   + L DFG+S+ + S
Sbjct: 108 FQIVSAVSYIHKAGILHRDIKTLNIFLTKAG--LIKLGDFGISKILGS 153

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 48.4 bits (116), Expect = 9e-06
 Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 22/111 (19%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK-------- 1000
            AY     L GL YLH  G  H +I+  N+++       VKL D G + ++T         
Sbjct: 104  AYVCRETLKGLAYLHETGKIHRDIKGANILLTE--DGDVKLADFGVSAQLTATIAKRKSF 161

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFP---QTDVWSAGVLAYVLLSGASP 1048
            +GT         P + APEV A E       + D+W+ G+ A  L     P
Sbjct: 162  IGT---------PYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPP 203

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 49.2 bits (117), Expect = 9e-06
 Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQ-RVTKLGTLIHPINT--PNPEF 1015
            L++LH   + + +++P+N+++ +  +  + L D G ++  +T   T     NT     E+
Sbjct: 109  LEHLHKYDIVYRDLKPENILLDA--TGHIALCDFGLSKANLTDNKT----TNTFCGTTEY 162

Query: 1016 AAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
             APEVL +E  +    D WS GVL + +  G SPF  +   +  +N+ F + RF
Sbjct: 163  LAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRF 216

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 48.2 bits (115), Expect = 1e-05
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGG L   L +   + E  I  Y RQ+L GL+Y+H  +  H  +   ++LV   G   + 
Sbjct: 85  PGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG--VVK 142

Query: 523 LTDFGLSRRITSFG 536
           L DFG+++++  F 
Sbjct: 143 LADFGMAKQVVEFS 156

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 47.9 bits (114), Expect = 1e-05
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 15/109 (13%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT----- 1003
             Y    +L GL YLH   + H +++  N+++ S    ++++ D G   R+   GT     
Sbjct: 107  NYT-EQLLRGLSYLHENQIIHRDVKGANLLIDSTGQ-RLRIADFGAAARLAAKGTGAGEF 164

Query: 1004 ---LIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
               L+  I      F APEVL  E      DVWS G +   + +   P+
Sbjct: 165  QGQLLGTI-----AFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPW 208

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 48.5 bits (116), Expect = 1e-05
 Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 18/150 (12%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC----------HR 240
           LG+G  G V  A  + +   YA KV+       K +   + D+   +           H 
Sbjct: 3   LGKGSFGKVLLAELKGTDELYAVKVLK------KDVILQDDDVECTMTEKRVLALAGKHP 56

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            L +LH  ++TKD    + E   GG+L+  + R   + E     Y  +++ GL ++H   
Sbjct: 57  FLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERG 116

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           I +  L   ++L+   G  H+ + DFG+ +
Sbjct: 117 IIYRDLKLDNVLLDSEG--HIKIADFGMCK 144

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 48.0 bits (115), Expect = 1e-05
 Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 24/122 (19%)

Query: 953  TSVLDGLQYLHWRG-----LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV--------T 999
            T +L  L   H R      + H +++P N+ + +  +  VKL D G  + +        T
Sbjct: 112  TQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA--NNNVKLGDFGLAKILGHDSSFAKT 169

Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
             +GT         P + +PE L       ++D+WS G L Y L + + PF  +++ +   
Sbjct: 170  YVGT---------PYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLAS 220

Query: 1060 NV 1061
             +
Sbjct: 221  KI 222

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 48.4 bits (115), Expect = 1e-05
 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 17/85 (20%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE-- 1201
            APE+L E    P  D W+ GVL Y +L G +PF  ++E +           FE +  +  
Sbjct: 164  APEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL----------FEAILNDEV 213

Query: 1202 -----LTQEATRFLMLIFKRAPGKR 1221
                 L+Q+A   L     + P  R
Sbjct: 214  VYPTWLSQDAVDILKAFMTKNPTMR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 48.1 bits (114), Expect = 1e-05
 Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 3/94 (3%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
             ++++H R + H +I+P NV + +  +  VKL DLG  +  +   T  H +    P + +
Sbjct: 118  AVEHMHSRRVMHRDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTAAHSL-VGTPYYMS 174

Query: 1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
            PE + E     ++D+WS G L Y + +  SPF G
Sbjct: 175  PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 208

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 48.1 bits (114), Expect = 1e-05
 Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 3/94 (3%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
             L+++H R + H +I+P NV + +  +  VKL DLG  +  +   T  H +    P + +
Sbjct: 118  ALEHMHSRRVMHRDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTAAHSL-VGTPYYMS 174

Query: 1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
            PE + E     ++D+WS G L Y + +  SPF G
Sbjct: 175  PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 208

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 48.6 bits (116), Expect = 1e-05
 Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 9/142 (6%)

Query: 194 GVTGIVYHAVERSSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           G  G VY    + + + +A K +  +     NQ + +F  E DI+    +  +V +  S+
Sbjct: 12  GAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFV-ERDILTFAENPFVVSMFCSF 70

Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLSIAHLGLTP 308
           ETK    ++ E   GG+   +L +       D+A  Y  + +  L+Y+H   I H  L P
Sbjct: 71  ETKRHLCMVMEYVEGGDCA-TLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKP 129

Query: 309 GDLLVAHPGGRHLLLTDFGLSR 330
            +LL+   G  H+ LTDFGLS+
Sbjct: 130 DNLLITSMG--HIKLTDFGLSK 149

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 48.6 bits (115), Expect = 1e-05
 Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK-LGTLIHP 1007
            AY    +L GL +LH   + H +I+  NV++    + +VKL+D G + ++ + +G     
Sbjct: 114  AYICREILRGLSHLHQHKVIHRDIKGQNVLLT--ENAEVKLVDFGVSAQLDRTVGRRNTF 171

Query: 1008 INTPNPEFAAPEVLA--EEPIFP---QTDVWSAGVLAYVLLSGASPF 1049
            I T  P + APEV+A  E P      ++D+WS G+ A  +  GA P 
Sbjct: 172  IGT--PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 216

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 48.9 bits (117), Expect = 1e-05
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 26/155 (16%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------ELDIMNQLCHRN 241
           +GRG  GIV  A    +    A K +        + F N         E+ ++  L H N
Sbjct: 13  IGRGAYGIVCSAKNSETNEKVAIKKIA-------NAFDNRIDAKRTLREIKLLRHLDHEN 65

Query: 242 LVRLHDSYE--TKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHY-IRQLLSGLDY 295
           ++ + D      +++F    I+ EL      LH + R S     D   Y + QLL GL Y
Sbjct: 66  VIAIKDIMPPPHREAFNDVYIVYELMDTD--LHQIIRSSQTLSDDHCQYFLYQLLRGLKY 123

Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           +H  ++ H  L P +LL+       L + DFGL+R
Sbjct: 124 IHSANVLHRDLKPSNLLLN--ANCDLKICDFGLAR 156

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 48.5 bits (115), Expect = 1e-05
 Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK-LGTLIHP 1007
            AY    +L GL +LH   + H +I+  NV++    + +VKL+D G + ++ + +G     
Sbjct: 124  AYICREILRGLAHLHAHKVIHRDIKGQNVLLT--ENAEVKLVDFGVSAQLDRTVGRRNTF 181

Query: 1008 INTPNPEFAAPEVLA--EEPIFP---QTDVWSAGVLAYVLLSGASPF 1049
            I T  P + APEV+A  E P      ++D+WS G+ A  +  GA P 
Sbjct: 182  IGT--PYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL 226

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 48.9 bits (116), Expect = 1e-05
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 942  IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
            +P      Y    VL  L  +H  GL H +++PDN+++   +   +KL D G   ++ + 
Sbjct: 139  VPEKWAKFYTAEVVL-ALDAIHSMGLIHRDVKPDNMLLD--KHGHLKLADFGTCMKMDET 195

Query: 1002 GTLIHPINTPNPEFAAPEVLAEEP----IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
            G +        P++ +PEVL  +        + D WS GV  + +L G +PF   S
Sbjct: 196  GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 251

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 47.9 bits (114), Expect = 2e-05
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 22/139 (15%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK--------LGTLIHPIN 1009
             L +LH  G+ + +++P+N+++       +KL D G ++             GT+     
Sbjct: 110  ALDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKESIDHEKKAYSFCGTV----- 162

Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
                E+ APEV+         D WS GVL + +L+G+ PF+G+   ET   +  +     
Sbjct: 163  ----EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET---MTMILKAKL 215

Query: 1070 YLFKELTQEATRFLMLIFK 1088
             + + L+ EA   L  +FK
Sbjct: 216  GMPQFLSPEAQSLLRALFK 234

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 48.1 bits (114), Expect = 2e-05
 Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 5/113 (4%)

Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPI 1008
            +    +   L YLH   + + +++P+N+++ S     V L D G C + + +  T     
Sbjct: 100  FYAAEIASALGYLHSINIVYRDLKPENILLDSQG--HVVLTDFGLCKEGIAQSDTTTTFC 157

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
             TP  E+ APEV+ ++P     D W  G + Y +L G  PF  +   E   N+
Sbjct: 158  GTP--EYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNI 208

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 47.7 bits (113), Expect = 2e-05
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GGEL   L R+  + E     Y  ++ S L Y+H ++I +  L P ++L+   G  H++L
Sbjct: 80  GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG--HVVL 137

Query: 524 TDFGLSR 530
           TDFGL +
Sbjct: 138 TDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 48.1 bits (114), Expect = 2e-05
 Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GGEL + L R+  + E     Y  ++ S L Y+H L+I +  L P ++L+   G  H++L
Sbjct: 80  GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG--HIVL 137

Query: 524 TDFGLSR 530
           TDFGL +
Sbjct: 138 TDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 47.7 bits (113), Expect = 2e-05
 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 5/108 (4%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
            V   + YLH   + + +++P+N+++ S     V L D G C + V    T      TP  
Sbjct: 105  VASAIGYLHSLNIIYRDLKPENILLDS--QGHVVLTDFGLCKEGVEPEETTSTFCGTP-- 160

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            E+ APEVL +EP     D W  G + Y +L G  PF  +   +   N+
Sbjct: 161  EYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNI 208

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 47.5 bits (113), Expect = 2e-05
 Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGG +   L     + E  + +++RQ+L GL+Y+H   I H  +   ++LV + GG  + 
Sbjct: 89  PGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGG--IK 146

Query: 523 LTDFGLSRRITSFGKLNPLEYGNGQYK 549
           ++DFG+S+++    + N L       +
Sbjct: 147 ISDFGISKKL----EANSLSTKTNGAR 169

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 2e-05
 Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 19/147 (12%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL---GTLIHPINTP 1011
            +L+G++YLH   + H +I+  N++  S  +  VKL D G ++R+  +   GT +  + T 
Sbjct: 113  ILEGVEYLHSNMIVHRDIKGANILRDSAGN--VKLGDFGASKRLQTICSSGTGMKSV-TG 169

Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE------TRQNVNFVR 1065
             P + +PEV++ E    + DVWS G     +L+   P+  + E          Q  N   
Sbjct: 170  TPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPW-AEFEAMAAIFKIATQPTNPQ- 227

Query: 1066 YRFEYLFKELTQEATRFLMLIFKHEVD 1092
                 L   ++ +A  FL   F     
Sbjct: 228  -----LPSHVSPDARNFLRRTFVENAK 249

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 47.5 bits (113), Expect = 2e-05
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 3/100 (3%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            +L GL +LH + + H +I+  N+ + +     VK+ DLG   ++    T         P 
Sbjct: 110  ILLGLAHLHSKKILHRDIKSLNLFLDA--YDNVKIGDLGVA-KLLSDNTNFANTIVGTPY 166

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
            + +PE+  ++P   ++DVW+ GV+ Y   +G  PF   ++
Sbjct: 167  YLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ 206

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 47.7 bits (113), Expect = 2e-05
 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 8/106 (7%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            +Y +   L GLQ+LH   + H +++ +N+++ +     VKL+D G + ++T    L    
Sbjct: 131  SYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGG--VKLVDFGVSAQLTS-TRLRRNT 187

Query: 1009 NTPNPEFAAPEVLAEEPIF-----PQTDVWSAGVLAYVLLSGASPF 1049
            +   P + APEV+A E  +      + DVWS G+ A  L  G  P 
Sbjct: 188  SVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPL 233

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 47.8 bits (113), Expect = 2e-05
 Identities = 38/157 (24%), Positives = 77/157 (49%), Gaps = 12/157 (7%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCH-RNLV 243
           ++  + +G G  G VY      +G+  A KVM   G++ + + K E++++ +  H RN+ 
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEI-KQEINMLKKYSHHRNIA 66

Query: 244 RLHDSYETK------DSFTIISELAGGGEL--LHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
             + ++  K      D   ++ E  G G +  L   T+ +   E  IA+  R++L GL +
Sbjct: 67  TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSH 126

Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           +H+  + H  +   ++L+       + L DFG+S ++
Sbjct: 127 LHQHKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQL 161

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 48.0 bits (114), Expect = 2e-05
 Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 9/170 (5%)

Query: 172 RQVKTRTK-PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFK 228
           RQ   +T   + D Y    ++G G  G V  A++R +G   A K +    +   +     
Sbjct: 3   RQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAY 62

Query: 229 NELDIMNQLCHRNLVRLHDSY---ETKDSFT-IISELAGGGELLHSLTRQSYYTEYDIAH 284
            EL ++  + H N++ L D +    + D F      +   G  L  L +    +E  I  
Sbjct: 63  RELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKHEKLSEDRIQF 122

Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            + Q+L GL Y+H   I H  L PG+L V       L + DFGL+R+  S
Sbjct: 123 LVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDC--ELKILDFGLARQTDS 170

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 47.5 bits (113), Expect = 2e-05
 Identities = 36/146 (24%), Positives = 75/146 (51%), Gaps = 9/146 (6%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLHD 247
           LG+G  G V     R++G+ YA K +  K  + +  ++    E  I+ ++  R +V L  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAY 60

Query: 248 SYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
           +++TK    ++  +  GG+L + +         + E     Y  Q++SGL+++H+  I +
Sbjct: 61  AFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIY 120

Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLS 329
             L P ++L+ + G  ++ ++D GL+
Sbjct: 121 RDLKPENVLLDNDG--NVRISDLGLA 144

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 46.9 bits (111), Expect = 3e-05
 Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 11/121 (9%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
            GL+ LH   + + +++P+N+++       +++ DLG    V +  T+   + T    + A
Sbjct: 114  GLEDLHQERIVYRDLKPENILLDD--HGHIRISDLGLAVHVPEGQTIKGRVGTVG--YMA 169

Query: 1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQ 1077
            PEV+  E      D W+ G L Y +++G SPF+ + +   R+ V       E L KE+ +
Sbjct: 170  PEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV-------ERLVKEVQE 222

Query: 1078 E 1078
            E
Sbjct: 223  E 223

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 47.1 bits (112), Expect = 3e-05
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 9/101 (8%)

Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT-KLGTLIHPI 1008
            Y    VL   +YLH + + + +++P+N+++ +     VK+ D G  ++V  +  TL    
Sbjct: 123  YHAELVL-AFEYLHSKDIIYRDLKPENLLLDN--KGHVKVTDFGFAKKVPDRTFTL---- 175

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
                PE+ APEV+  +      D W+ GVL Y  ++G  PF
Sbjct: 176  -CGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPF 215

Length = 329

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 46.9 bits (111), Expect = 3e-05
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 2/96 (2%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
            GL+++H R + H +I+  N+ ++    V  KL D G   R       +       P + +
Sbjct: 113  GLKHIHDRKILHRDIKSQNIFLSKNGMV-AKLGDFG-IARQLNDSMELAYTCVGTPYYLS 170

Query: 1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
            PE+    P   +TD+WS G + Y L +   PF G +
Sbjct: 171  PEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 48.3 bits (115), Expect = 3e-05
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 2/105 (1%)

Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTI-ISELAGGGELLHSLTRQSYYTEYDIAHY 285
           F+ E  +  +L H N+V L DS E        + E   G  L   L         +    
Sbjct: 25  FRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEYVPGRTLREVLAADGALPAGETGRL 84

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLS 329
           + Q+L  L   H   I H  L P +++V+  G   H  + DFG+ 
Sbjct: 85  MLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIG 129

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 47.0 bits (112), Expect = 3e-05
 Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 9/152 (5%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY    + +G+  A K +  +  +    S    E+ ++ +L H N+V L 
Sbjct: 6   EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQ 65

Query: 247 DSYETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
           D    +    +I E       + L SL +  Y     +  Y+ Q+L G+ + H   + H 
Sbjct: 66  DVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHR 125

Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
            L P +LL+ + G   + L DFGL+R   +FG
Sbjct: 126 DLKPQNLLIDNKGV--IKLADFGLAR---AFG 152

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 46.3 bits (110), Expect = 4e-05
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            +L GL+YLH R   H +I+  N+++ +  +  VKL D G  ++V +         +P   
Sbjct: 111  ILLGLEYLHDRNTVHRDIKGANILVDT--NGVVKLADFGMAKQVVEFSFAKSFKGSPY-- 166

Query: 1015 FAAPEVLAEEPIFP-QTDVWSAGVLAYVLLSGASPFRGQSEP 1055
            + APEV+A++  +    D+WS G     + +G  P+  Q E 
Sbjct: 167  WMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPW-SQLEG 207

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 46.9 bits (111), Expect = 4e-05
 Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 13/68 (19%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGG  LH          Y++  ++ QLL GL Y+H   I H  L P +LL+++ G   L 
Sbjct: 97  PGG--LHP---------YNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLG--ELK 143

Query: 523 LTDFGLSR 530
           L DFGL+R
Sbjct: 144 LADFGLAR 151

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 46.5 bits (111), Expect = 4e-05
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 10/107 (9%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHP 1007
            AY +   L GL YLH   + H +I+  N+++   ++ +VKL+D G   Q  + LG     
Sbjct: 116  AYILRETLRGLAYLHENKVIHRDIKGQNILLT--KNAEVKLVDFGVSAQLDSTLGRRNTF 173

Query: 1008 INTPNPEFAAPEVLA-----EEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            I TP   + APEV+A     +     ++DVWS G+ A  L  G  P 
Sbjct: 174  IGTPY--WMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPL 218

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 46.6 bits (110), Expect = 4e-05
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 11/104 (10%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT----KLGTL 1004
            A  +  +L GL YLH     H +I+  NV+++      VKL D G   ++T    K  T 
Sbjct: 104  ATMLKEILKGLDYLHSEKKIHRDIKAANVLLS--EQGDVKLADFGVAGQLTDTQIKRNTF 161

Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
            +       P + APEV+ +     + D+WS G+ A  L  G  P
Sbjct: 162  VG-----TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 200

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 47.0 bits (111), Expect = 4e-05
 Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 6/144 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLC-HRNLVRLH 246
           +GRG    V     + + R YA KV+  +    ++     + E  +  Q   H  LV LH
Sbjct: 3   IGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 62

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
             ++T+     + E   GG+L+  + RQ    E     Y  ++   L+Y+H   I +  L
Sbjct: 63  SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 122

Query: 307 TPGDLLVAHPGGRHLLLTDFGLSR 330
              ++L+   G  H+ LTD+G+ +
Sbjct: 123 KLDNVLLDSEG--HIKLTDYGMCK 144

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 46.6 bits (110), Expect = 4e-05
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL---GTLIHPINTP 1011
            +L+G+ YLH   + H +I+  N++  S  +V  KL D G ++R+  +   GT I  + T 
Sbjct: 115  ILEGMSYLHSNMIVHRDIKGANILRDSAGNV--KLGDFGASKRLQTICMSGTGIRSV-TG 171

Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
             P + +PEV++ E    + DVWS G     +L+   P+
Sbjct: 172  TPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPW 209

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 47.1 bits (112), Expect = 4e-05
 Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 24/164 (14%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----SLFKNELDIMNQLCHR 240
           +D    +GRG  G V     +SS + YA K+++ K    K    + F  E DIM    H 
Sbjct: 45  FDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLS-KFEMIKRSDSAFFWEERDIM---AHA 100

Query: 241 N---LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDI-----AHYIRQLLSG 292
           N   +V+LH +++      ++ E   GG+L+      +  + YDI       Y  +++  
Sbjct: 101 NSEWIVQLHYAFQDDKYLYMVMEYMPGGDLV------NLMSNYDIPEKWARFYTAEVVLA 154

Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           LD +H +   H  + P ++L+   G  HL L DFG   ++ + G
Sbjct: 155 LDAIHSMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMDANG 196

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 47.3 bits (112), Expect = 4e-05
 Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 24/176 (13%)

Query: 170 RGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----S 225
           R  Q+K       + YD    +GRG  G V     +SS + YA K+++ K    K    +
Sbjct: 36  RKLQMKA------EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLS-KFEMIKRSDSA 88

Query: 226 LFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH- 284
            F  E DIM       +V+L  +++      ++ E   GG+L++ +      + YD+   
Sbjct: 89  FFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM------SNYDVPEK 142

Query: 285 ----YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
               Y  +++  LD +H + + H  + P ++L+   G  HL L DFG   ++   G
Sbjct: 143 WAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG--HLKLADFGTCMKMDETG 196

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 47.9 bits (114), Expect = 4e-05
 Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 19/118 (16%)

Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQ--VKLIDLGCT-----------QRV 998
            +  VLD L   H +G+ H +++P N+ M S   V+   K++D G               +
Sbjct: 85   MLQVLDALACAHNQGIVHRDLKPQNI-MVSQTGVRPHAKVLDFGIGTLLPGVRDADVATL 143

Query: 999  TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
            T+   ++       P + APE L  EP+ P +D+++ G++    L+G    +G S  E
Sbjct: 144  TRTTEVLG-----TPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQRVVQGASVAE 196

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 47.8 bits (114), Expect = 4e-05
 Identities = 37/169 (21%), Positives = 74/169 (43%), Gaps = 36/169 (21%)

Query: 902  TIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQY 961
            T+P + G  L+    +V + + + +     TS   +L I              +   ++Y
Sbjct: 80   TMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFH-----------KICATIEY 128

Query: 962  LHWRGLCHLNIEPDNVVMASVRSV--------------QVKLIDL------GCTQRVTKL 1001
            +H +G+ H +++PDN+++     V              +  L+D+       C   +T  
Sbjct: 129  VHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIP 188

Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFR 1050
            G ++    TP+  + APE L   P    TD+++ GV+ Y +L+ + P+R
Sbjct: 189  GKIV---GTPD--YMAPERLLGVPASESTDIYALGVILYQMLTLSFPYR 232

Length = 932

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 46.7 bits (111), Expect = 4e-05
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 7/157 (4%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHR 240
           D Y+  +++G G  G+VY A +R +    A K   +  +     S    E+ ++ ++ H 
Sbjct: 2   DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD-IAHYIRQLLSGLDYMHRL 299
           N+VRL D   ++    ++ E        H  +   +      I  Y+ Q+L G+ Y H  
Sbjct: 62  NIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH 121

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
            + H  L P +LL+       L L DFGL+R   +FG
Sbjct: 122 RVLHRDLKPQNLLIDRRTNA-LKLADFGLAR---AFG 154

Length = 294

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 46.5 bits (110), Expect = 5e-05
 Identities = 21/67 (31%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GGEL   L+++  + E ++  Y  +++  L+++H+L I +  +   ++L+   G  H++L
Sbjct: 89  GGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG--HVVL 146

Query: 524 TDFGLSR 530
           TDFGLS+
Sbjct: 147 TDFGLSK 153

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 46.4 bits (110), Expect = 5e-05
 Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 18/150 (12%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD---------IMNQLC-HR 240
           LG+G  G V  A  + SGR YA KV+       K +   + D         I++    H 
Sbjct: 3   LGKGSFGKVMLARLKESGRLYAVKVLK------KDVILQDDDVECTMTEKRILSLARNHP 56

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            L +L+  ++T D    + E   GG+L+  + +   + E     Y  ++ S L ++H   
Sbjct: 57  FLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKG 116

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           I +  L   ++L+ H G  H  L DFG+ +
Sbjct: 117 IIYRDLKLDNVLLDHEG--HCKLADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 46.5 bits (110), Expect = 5e-05
 Identities = 51/170 (30%), Positives = 69/170 (40%), Gaps = 27/170 (15%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAK---VMTGKGNQYKSLFKNE--LDIMNQLCHRNLVR 244
           E+G G  G VY A +  SG   A K   V T +     S  +    L  +    H N+VR
Sbjct: 7   EIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVR 66

Query: 245 LHDSYET--KDSFTIISELAGGGELLHSLTRQSYYTEYD-----------IAHYIRQLLS 291
           L D   T   D  T ++       L+     Q   T  D           I   +RQ L 
Sbjct: 67  LMDVCATSRTDRETKVT-------LVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLR 119

Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL 341
           GLD++H   I H  L P ++LV   G   + L DFGL+R  +    L P+
Sbjct: 120 GLDFLHANCIVHRDLKPENILVTSGG--QVKLADFGLARIYSCQMALTPV 167

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 46.4 bits (111), Expect = 5e-05
 Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 20/149 (13%)

Query: 194 GVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK----NELDIMNQLCHRNLVRLHDSY 249
           G  G+VY A ++ +G   A K +  K  + K  F      E++I+ +L H N+V + +  
Sbjct: 16  GTYGVVYRARDKKTGEIVALKKL--KMEKEKEGFPITSLREINILLKLQHPNIVTVKEVV 73

Query: 250 --ETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
                D   ++ E     L    E +     QS     ++   + QLLSG+ ++H   I 
Sbjct: 74  VGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQS-----EVKCLMLQLLSGVAHLHDNWIL 128

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
           H  L   +LL+ + G   L + DFGL+R 
Sbjct: 129 HRDLKTSNLLLNNRG--ILKICDFGLARE 155

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 46.5 bits (110), Expect = 5e-05
 Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 5/114 (4%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP-EFA 1016
            G+QYL    L H ++   NV++A  R  ++K+ D G ++ V +  + +       P ++ 
Sbjct: 139  GMQYLAEMKLVHRDLAARNVLVAEGR--KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWM 196

Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFE 1069
            A E L +     Q+DVWS GVL + +++ G +P+ G + PE   N+    YR E
Sbjct: 197  AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA-PERLFNLLKTGYRME 249

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 46.4 bits (111), Expect = 6e-05
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 16/101 (15%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-----TKLGTLIHPIN 1009
            V+  L+YLH   + + +++P+N+++ S   +  K+ D G  +RV     T  GT      
Sbjct: 110  VVLALEYLHSLDIVYRDLKPENLLLDSDGYI--KITDFGFAKRVKGRTYTLCGT------ 161

Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFR 1050
               PE+ APE++  +      D W+ G+L Y +L+G  PF 
Sbjct: 162  ---PEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFF 199

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 46.3 bits (110), Expect = 6e-05
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APEV+         D WS GVL + +L+G+ PF+G+   ET   +  +      + + L+
Sbjct: 166  APEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET---MTMILKAKLGMPQFLS 222

Query: 1204 QEATRFLMLIFKRAPGKR 1221
             EA   L  +FKR P  R
Sbjct: 223  PEAQSLLRALFKRNPANR 240

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 46.6 bits (111), Expect = 6e-05
 Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 9/81 (11%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV--NFVRY-RFEYLFK 1200
            APEVL E       D W  GVL Y +L G SPF G  E E   ++  + VRY RF     
Sbjct: 169  APEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRF----- 223

Query: 1201 ELTQEATRFLMLIFKRAPGKR 1221
             L++EA   +  + +R P +R
Sbjct: 224  -LSREAISIMRRLLRRNPERR 243

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 46.1 bits (109), Expect = 6e-05
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 18/122 (14%)

Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI 286
           F  E+ IM++L + N++RL     + D   +I+E    G+L   L+++   + +  A+ I
Sbjct: 64  FLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNI 123

Query: 287 ------------RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL--TDFGLSRRI 332
                        Q+ SG+ Y+  L+  H  L   + LV    G H  +   DFG+SR +
Sbjct: 124 PSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV----GNHYTIKIADFGMSRNL 179

Query: 333 TS 334
            S
Sbjct: 180 YS 181

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 46.5 bits (111), Expect = 6e-05
 Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 24/154 (15%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--------GKGNQYKSLFKNELDIMNQLCHRNL 242
           +G G  G V  A +  +GR  A K ++         K   Y+     EL ++  + H N+
Sbjct: 23  VGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRT-YR-----ELRLLKHMDHENV 76

Query: 243 VRLHDSY---ETKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
           + L D +    + + F    +++ L G    L+++ +    ++  I   + Q+L GL Y+
Sbjct: 77  IGLLDVFTPASSLEDFQDVYLVTHLMGAD--LNNIVKCQKLSDDHIQFLVYQILRGLKYI 134

Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           H   I H  L P ++ V       L + DFGL+R
Sbjct: 135 HSAGIIHRDLKPSNIAVN--EDCELKILDFGLAR 166

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 46.5 bits (110), Expect = 6e-05
 Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 5/112 (4%)

Query: 943  PTTHKDAYCVT-SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
            P T +D  C +  V  G+++L  R   H ++   N++++   +  VK+ D G  + + K 
Sbjct: 170  PLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS--ENNVVKICDFGLARDIYKD 227

Query: 1002 GTLIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
               +   +   P ++ APE + ++    Q+DVWS GVL + + S GASP+ G
Sbjct: 228  PDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPG 279

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 46.1 bits (109), Expect = 7e-05
 Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 18/156 (11%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--- 241
           ++F   LG+G  G V  A  + +   YA K++       K +   + D+   +  +    
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILK------KDVVIQDDDVECTMVEKRVLA 55

Query: 242 -------LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
                  L +LH  ++T D    + E   GG+L++ + +   + E     Y  ++  GL 
Sbjct: 56  LQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLF 115

Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           ++HR  I +  L   ++++   G  H+ + DFG+ +
Sbjct: 116 FLHRRGIIYRDLKLDNVMLDSEG--HIKIADFGMCK 149

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 45.6 bits (108), Expect = 7e-05
 Identities = 23/103 (22%), Positives = 51/103 (49%), Gaps = 3/103 (2%)

Query: 953  TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
              +L  L ++H + + H +++  N+++   + V VK+ D G ++ ++        + TP 
Sbjct: 108  VQILLALHHVHTKLILHRDLKTQNILLDKHKMV-VKIGDFGISKILSSKSKAYTVVGTPC 166

Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
              + +PE+   +P   ++D+W+ G + Y L S    F   + P
Sbjct: 167  --YISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP 207

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 45.7 bits (109), Expect = 8e-05
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL-FKEL 1202
            APEV+  +      D WS G + Y  L G  PF G++  E  QN+  +  + E+    E+
Sbjct: 169  APEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNI--LNGKIEWPEDVEV 226

Query: 1203 TQEA 1206
            + EA
Sbjct: 227  SDEA 230

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 45.6 bits (108), Expect = 8e-05
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG + H L++   + E  I +Y  QLL GL Y+H   I H  +   +LL+    G+ L 
Sbjct: 86  AGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLI-DSTGQRLR 144

Query: 523 LTDFGLSRRITS 534
           + DFG + R+ +
Sbjct: 145 IADFGAAARLAA 156

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 46.2 bits (110), Expect = 8e-05
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 13/154 (8%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKG-----NQYKSLF--KNELDIMNQLCHRNLV 243
           LGRG  G V  A  + +G  YA K +  KG     ++ +SL   K   +  N   H  LV
Sbjct: 7   LGRGHFGKVLLAEYKKTGELYAIKALK-KGDIIARDEVESLMCEKRIFETANSERHPFLV 65

Query: 244 RLHDSYETKDSFTIISELAGGGEL-LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
            L   ++T+D    + E A GG+L +H  T    ++E     Y   ++ GL Y+H   I 
Sbjct: 66  NLFACFQTEDHVCFVMEYAAGGDLMMHIHTDV--FSEPRAVFYAACVVLGLQYLHENKIV 123

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           +  L   +LL+   G   + + DFGL +    FG
Sbjct: 124 YRDLKLDNLLLDTEG--FVKIADFGLCKEGMGFG 155

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 46.2 bits (109), Expect = 8e-05
 Identities = 34/145 (23%), Positives = 76/145 (52%), Gaps = 14/145 (9%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL-------FKNELDIMNQLCHRNLV 243
           +GRG  G V     +++ + +A K++    N+++ L       F+ E D++    ++ + 
Sbjct: 9   IGRGAFGEVAVVKLKNADKVFAMKIL----NKWEMLKRAETACFREERDVLVNGDNQWIT 64

Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLSIA 302
            LH +++ +++  ++ +   GG+LL  L++       D+A  Y+ +++  +D +H+L   
Sbjct: 65  TLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYV 124

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFG 327
           H  + P ++L+   G  H+ L DFG
Sbjct: 125 HRDIKPDNILMDMNG--HIRLADFG 147

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 45.8 bits (108), Expect = 8e-05
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL---GTLIHPINTP 1011
            +L+G+ YLH   + H +I+  N++  SV +V  KL D G ++R+  +   GT +  + T 
Sbjct: 115  ILEGVSYLHSNMIVHRDIKGANILRDSVGNV--KLGDFGASKRLQTICLSGTGMKSV-TG 171

Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
             P + +PEV++ E    + D+WS G     +L+   P+
Sbjct: 172  TPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPW 209

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 45.9 bits (109), Expect = 8e-05
 Identities = 39/154 (25%), Positives = 80/154 (51%), Gaps = 14/154 (9%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL-------FKNELDIMNQLCHRNLV 243
           +GRG  G V     +++G+ YA K++    N+++ L       F+ E D++     R + 
Sbjct: 9   IGRGAFGEVAVVKMKNTGQVYAMKIL----NKWEMLKRAETACFREERDVLVNGDRRWIT 64

Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLSIA 302
            LH +++ +++  ++ +   GG+LL  L++       D+A  Y+ +++  +D +H+L   
Sbjct: 65  NLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYV 124

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           H  + P ++L+   G  H+ L DFG   R+ + G
Sbjct: 125 HRDIKPDNVLLDKNG--HIRLADFGSCLRLLADG 156

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 45.8 bits (108), Expect = 8e-05
 Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 9/143 (6%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLH 246
           E+G G  G VY A +  +    A K M+  G Q    +++   E+  + +L H N ++  
Sbjct: 22  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81

Query: 247 DSYETKDSFTIISE--LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
             Y  + +  ++ E  L    +LL     +    E +IA      L GL Y+H  ++ H 
Sbjct: 82  GCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139

Query: 305 GLTPGDLLVAHPGGRHLLLTDFG 327
            +  G++L++ PG   + L DFG
Sbjct: 140 DVKAGNILLSEPG--LVKLGDFG 160

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 45.8 bits (109), Expect = 8e-05
 Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 10/146 (6%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
           LG G  G V+      + +  A K +   G      F  E  IM +L H  LV+L+    
Sbjct: 14  LGAGQFGEVWMGTWNGTTK-VAVKTLK-PGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCS 71

Query: 251 TKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
            ++   I++E    G LL  L            +     Q+  G+ Y+   +  H  L  
Sbjct: 72  EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAA 131

Query: 309 GDLLVAHPGGRHLL--LTDFGLSRRI 332
            ++LV    G +L+  + DFGL+R I
Sbjct: 132 RNILV----GENLVCKIADFGLARLI 153

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 46.2 bits (109), Expect = 8e-05
 Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 10/183 (5%)

Query: 173 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNE 230
           QV   T  +   Y     +G G  GIV  A +   G N A K ++   +   +      E
Sbjct: 11  QVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRE 70

Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIR 287
           L ++  + H+N++ L + +  + S     ++    EL+ +   Q  + E D   +++ + 
Sbjct: 71  LVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLY 130

Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDV-R 346
           Q+L G+ ++H   I H  L P +++V       +L  DFGL+R   +   + P  Y V R
Sbjct: 131 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL--DFGLARTACTNFMMTP--YVVTR 186

Query: 347 YVR 349
           Y R
Sbjct: 187 YYR 189

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 45.9 bits (108), Expect = 8e-05
 Identities = 48/216 (22%), Positives = 90/216 (41%), Gaps = 28/216 (12%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLH 246
           E+G G  G VY A +  +    A K M+  G Q    +++   E+  + ++ H N +   
Sbjct: 32  EIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYK 91

Query: 247 DSYETKDSFTIISE--LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
             Y  + +  ++ E  L    +LL     +    E +IA      L GL Y+H  ++ H 
Sbjct: 92  GCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAITHGALQGLAYLHSHNMIHR 149

Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK---------------LNPLEYDVRYVR 349
            +  G++L+  PG   + L DFG +   +                   ++  +YD +   
Sbjct: 150 DIKAGNILLTEPG--QVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGKVDV 207

Query: 350 QALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD 385
            +L    +  A+RKP    P  N +A+   Y++ ++
Sbjct: 208 WSLGITCIELAERKP----PLFNMNAMSALYHIAQN 239

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 46.0 bits (109), Expect = 9e-05
 Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 18/150 (12%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI----------MNQLCHR 240
           +GRG    V     + + R YA KV+       K L  ++ DI               H 
Sbjct: 3   IGRGSYAKVLLVELKKTRRIYAMKVIK------KELVNDDEDIDWVQTEKHVFETASNHP 56

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            LV LH  ++T+     + E   GG+L+  + RQ    E     Y  ++   L+++H   
Sbjct: 57  FLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERG 116

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           I +  L   ++L+   G  H+ LTD+G+ +
Sbjct: 117 IIYRDLKLDNVLLDAEG--HIKLTDYGMCK 144

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 45.8 bits (109), Expect = 9e-05
 Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 18/154 (11%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  G+VY A ++ +G   A K   +  +     S    E+ ++ +L H N+VRL D 
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDV 66

Query: 249 YETKDSFTIISELAGGGELLHSLTR---QSYYTEYD---IAHYIRQLLSGLDYMHRLSIA 302
             +++   ++ E      L   L +    S  T  D   I  Y+ QLL G+ Y H   + 
Sbjct: 67  VHSENKLYLVFEF-----LDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVL 121

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           H  L P +LL+   G   L L DFGL+R   +FG
Sbjct: 122 HRDLKPQNLLIDREG--ALKLADFGLAR---AFG 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 45.6 bits (108), Expect = 9e-05
 Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 11/144 (7%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ----YKSLFKNELDIMNQLCHRNLVRL 245
           E+G G  G VY A +  +    A K M+  G Q    ++ + K E+  + QL H N +  
Sbjct: 22  EIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIK-EVRFLQQLRHPNTIEY 80

Query: 246 HDSYETKDSFTIISE--LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
              Y  + +  ++ E  L    ++L    +     E +IA      L GL Y+H     H
Sbjct: 81  KGCYLREHTAWLVMEYCLGSASDILEVHKKP--LQEVEIAAICHGALQGLAYLHSHERIH 138

Query: 304 LGLTPGDLLVAHPGGRHLLLTDFG 327
             +  G++L+  PG   + L DFG
Sbjct: 139 RDIKAGNILLTEPG--TVKLADFG 160

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 45.2 bits (108), Expect = 1e-04
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 482 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
           I   + QLL GL Y H   I H  L P ++L+   G   L L DFGL+R    
Sbjct: 100 IKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDG--VLKLADFGLARAFGI 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 45.4 bits (108), Expect = 1e-04
 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGG+L++ L R+  + E     YI +L+  LD +H+L   H  + P ++L+   G  H+ 
Sbjct: 84  PGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADG--HIK 141

Query: 523 LTDFGLSRRITSFGK 537
           L DFGL +++     
Sbjct: 142 LADFGLCKKMNKAKD 156

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 45.2 bits (108), Expect = 1e-04
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 473 RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
           +   ++E  I   I Q+L GL ++H+    H  L P +LLV+  G   + + DFGL+R I
Sbjct: 92  KGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS--GPEVVKIADFGLAREI 149

Query: 533 TS 534
            S
Sbjct: 150 RS 151

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 45.2 bits (107), Expect = 1e-04
 Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL   L R+  + E     Y+ ++   L+++H+  I +  L P ++L+   G  H+ 
Sbjct: 83  SGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG--HVK 140

Query: 523 LTDFGLSR 530
           LTDFGL +
Sbjct: 141 LTDFGLCK 148

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 45.5 bits (108), Expect = 1e-04
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 20/107 (18%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGC--------TQRVTKLGTLIH 1006
            VL  L+Y+H  G+ H +I+  N+++    +  VKL D G         ++R T +GT   
Sbjct: 110  VLVALKYIHKVGVIHRDIKAANILVT--NTGNVKLCDFGVAALLNQNSSKRSTFVGT--- 164

Query: 1007 PINTPNPEFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQ 1052
                  P + APEV+ E   +    D+WS G+  Y + +G  P+   
Sbjct: 165  ------PYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDV 205

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 45.3 bits (107), Expect = 1e-04
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE+L         D WS GVL Y +L G SPF G  E E  ++   +R    +  + +T
Sbjct: 164  APEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFES---IRVDTPHYPRWIT 220

Query: 1204 QEATRFLMLIFKRAPGKR 1221
            +E+   L  +F+R P +R
Sbjct: 221  KESKDILEKLFERDPTRR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 45.2 bits (107), Expect = 1e-04
 Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 2/71 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GGEL   L ++ ++TE ++  YI +++  LD++H+L I +  +   ++L+   G  H++L
Sbjct: 89  GGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEG--HVVL 146

Query: 524 TDFGLSRRITS 534
           TDFGLS+   +
Sbjct: 147 TDFGLSKEFLA 157

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 45.6 bits (108), Expect = 1e-04
 Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 4/104 (3%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
            GL+ LH   + + +++P+N+++     +++   DLG    + +  T+   + T    + A
Sbjct: 114  GLEDLHRERIVYRDLKPENILLDDYGHIRIS--DLGLAVEIPEGETIRGRVGTVG--YMA 169

Query: 1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            PEV+  E      D W  G L Y ++ G SPFR + E   R+ V
Sbjct: 170  PEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEV 213

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 45.0 bits (106), Expect = 1e-04
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL---GTLIHPINTP 1011
            +L G+ YLH   + H +I+  N++  S  +  VKL D G ++R+  +   GT I  + T 
Sbjct: 115  ILQGVSYLHSNMIVHRDIKGANILRDS--AGNVKLGDFGASKRIQTICMSGTGIKSV-TG 171

Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
             P + +PEV++ E    + DVWS       +L+   P+
Sbjct: 172  TPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPW 209

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 45.6 bits (108), Expect = 1e-04
 Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 18/158 (11%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC----------HR 240
           LG+G  G V  A  + +   YA KV+       K +   + D+   +           H 
Sbjct: 3   LGKGSFGKVMLAELKGTDEVYAIKVLK------KDVILQDDDVDCTMTEKRILALAAKHP 56

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            L  LH  ++TKD    + E   GG+L+  + R   + E     Y  ++   L ++HR  
Sbjct: 57  FLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHG 116

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
           + +  L   ++L+   G  H  L DFG+ +     G  
Sbjct: 117 VIYRDLKLDNILLDAEG--HCKLADFGMCKEGILNGVT 152

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 45.4 bits (108), Expect = 1e-04
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 9/79 (11%)

Query: 467 LLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
           ++HS   Q    E+ I +++ QLL GL Y+H  ++ H  L P +LLV       L + DF
Sbjct: 97  IIHS--DQPLTEEH-IRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDC--ELRIGDF 151

Query: 527 GLSRRITSFGKLNPLEYGN 545
           G++R ++S    +P E+  
Sbjct: 152 GMARGLSS----SPTEHKY 166

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 45.4 bits (107), Expect = 1e-04
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 14/119 (11%)

Query: 938  LPIVIPTTHKDAYCVT---SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGC 994
            L ++ P   ++ Y  T    +L GL YLH     H +I+  NV+++      VKL D G 
Sbjct: 90   LDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS--EQGDVKLADFGV 147

Query: 995  TQRVT----KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
              ++T    K  T +       P + APEV+ +     + D+WS G+ A  L  G  P 
Sbjct: 148  AGQLTDTQIKRNTFVG-----TPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPN 201

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 45.0 bits (106), Expect = 1e-04
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 8/106 (7%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            AY +   L GLQ+LH     H +++ +N+++ +     VKL+D G + ++T    L    
Sbjct: 127  AYILHEALMGLQHLHVNKTIHRDVKGNNILLTT--EGGVKLVDFGVSAQLTST-RLRRNT 183

Query: 1009 NTPNPEFAAPEVLAEEPIFPQT-----DVWSAGVLAYVLLSGASPF 1049
            +   P + APEV+A E     T     DVWS G+ A  L  G  P 
Sbjct: 184  SVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPL 229

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 45.2 bits (107), Expect = 1e-04
 Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 19/117 (16%)

Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT------QRVT 999
             +  +    ++ GL++LH R + + +++P+NV++ +     V++ DLG        Q  T
Sbjct: 97   PRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDN--DGNVRISDLGLAVELKDGQSKT 154

Query: 1000 K--LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
            K   GT         P F APE+L  E      D ++ GV  Y +++   PFR + E
Sbjct: 155  KGYAGT---------PGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 202

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 45.7 bits (109), Expect = 1e-04
 Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 10/160 (6%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-NELDIMNQLCH 239
           +   Y     +G G  G+V  A  + +G   A K ++   +Q        E+ I+ +  H
Sbjct: 3   VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKH 62

Query: 240 RNLVRLHD-----SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
            N++ + D     S+E+ +   I+ EL      L+ L +  + +   I +++ Q+L GL 
Sbjct: 63  ENIIGILDIIRPPSFESFNDVYIVQELMETD--LYKLIKTQHLSNDHIQYFLYQILRGLK 120

Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           Y+H  ++ H  L P +LL+       L + DFGL+R    
Sbjct: 121 YIHSANVLHRDLKPSNLLLN--TNCDLKICDFGLARIADP 158

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 45.4 bits (107), Expect = 1e-04
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 6/116 (5%)

Query: 939  PIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV 998
            P V   T KD   +  +L GL +LH   + H +++P N+++ S  S Q+KL D G   R+
Sbjct: 105  PGVPTETIKDM--MFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLA-RI 159

Query: 999  TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
                  +  +      + APEVL +       D+WS G +   +      FRG S+
Sbjct: 160  YSFQMALTSV-VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 214

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 45.3 bits (107), Expect = 1e-04
 Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 7/145 (4%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHD 247
           + LG G  G VY A    + R  A KV+      + +    +EL+I+ +     ++  + 
Sbjct: 7   EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYG 66

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           ++  ++  +I +E   GG    SL       E+ +      ++ GL Y+  L I H  + 
Sbjct: 67  AFFVENRISICTEFMDGG----SLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVK 122

Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRI 332
           P ++LV   G   + L DFG+S ++
Sbjct: 123 PSNMLVNTRG--QVKLCDFGVSTQL 145

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 44.9 bits (106), Expect = 1e-04
 Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 4/104 (3%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
            G+ +LH   + + +++P+NV++        +L DLG    +    T+     T    + A
Sbjct: 107  GILHLHSMDIVYRDMKPENVLLDDQG--NCRLSDLGLAVELKDGKTITQRAGTNG--YMA 162

Query: 1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            PE+L EEP     D ++ G   Y +++G +PF+   E   ++ +
Sbjct: 163  PEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEEL 206

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 45.0 bits (106), Expect = 1e-04
 Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 10/161 (6%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           +G G  G        +S + YA K +   K +      + E  ++ ++ H N+V   +S+
Sbjct: 8   VGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF 67

Query: 250 ETKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           E      I+ E   GG+L+  +  Q    + E  I  +  Q+  G+ ++H   + H  + 
Sbjct: 68  EADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIK 127

Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYV 348
             ++ +   G   + L DFG +R +T     +P  Y   YV
Sbjct: 128 SKNIFLTQNG--KVKLGDFGSARLLT-----SPGAYACTYV 161

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 44.8 bits (106), Expect = 1e-04
 Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 13/148 (8%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           +LG G  G V+           A K +  +G+     F  E ++M QL H  LVRL+ + 
Sbjct: 13  KLGAGQFGEVWMGYYNGH-TKVAIKSLK-QGSMSPEAFLAEANLMKQLQHPRLVRLY-AV 69

Query: 250 ETKDSFTIISELAGGGELLHSL-----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
            T++   II+E    G L+  L      + +     D+A    Q+  G+ ++ R +  H 
Sbjct: 70  VTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMA---AQIAEGMAFIERKNYIHR 126

Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            L   ++LV+        + DFGL+R I
Sbjct: 127 DLRAANILVSET--LCCKIADFGLARLI 152

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 44.7 bits (105), Expect = 1e-04
 Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           +LG+G  G V+      + R  A K +   G      F  E  +M +L H  LV+L+ + 
Sbjct: 13  KLGQGCFGEVWMGTWNGTTR-VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLY-AV 69

Query: 250 ETKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
            +++   I++E    G LL  L  +   Y     +     Q+ SG+ Y+ R++  H  L 
Sbjct: 70  VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 129

Query: 308 PGDLLVAHPGGRHLL--LTDFGLSRRI 332
             ++LV    G +L+  + DFGL+R I
Sbjct: 130 AANILV----GENLVCKVADFGLARLI 152

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 44.8 bits (106), Expect = 2e-04
 Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)

Query: 479 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
           E  +A   RQ+LSG+ Y+HR  I H  + P +LL+     +++ + DFG+SR
Sbjct: 167 EQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN--SAKNVKIADFGVSR 216

Length = 353

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 44.6 bits (106), Expect = 2e-04
 Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 30/135 (22%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI-----N 1009
            VL  L+YLH  G+ + +++P+N+++    S  + L D   +++       +         
Sbjct: 112  VLLALEYLHLLGIVYRDLKPENILLH--ESGHIMLSDFDLSKQSDVEPPPVSKALRKGSR 169

Query: 1010 TPNPEFAAPEVLAEEPIF-----------------------PQTDVWSAGVLAYVLLSGA 1046
              +      E  +EEP F                          D W+ G+L Y +L G 
Sbjct: 170  RSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGT 229

Query: 1047 SPFRGQSEPETRQNV 1061
            +PF+G +  ET  N+
Sbjct: 230  TPFKGSNRDETFSNI 244

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 45.4 bits (108), Expect = 2e-04
 Identities = 18/45 (40%), Positives = 23/45 (51%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1188
            APEVL   P   + D WS GV+ Y +L G  PF   +  ET   +
Sbjct: 198  APEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKI 242

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 44.6 bits (105), Expect = 2e-04
 Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GGEL   L R+  + E     Y  ++ S + Y+H L+I +  L P ++L+   G  H++L
Sbjct: 80  GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG--HVVL 137

Query: 524 TDFGLSR 530
           TDFGL +
Sbjct: 138 TDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 45.1 bits (106), Expect = 2e-04
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
            ++  L YLH   + + +++ +N+++   +   +K+ D G C + +T   T+     TP  
Sbjct: 104  IVSALDYLHSGKIVYRDLKLENLMLD--KDGHIKITDFGLCKEGITDAATMKTFCGTP-- 159

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052
            E+ APEVL +       D W  GV+ Y ++ G  PF  Q
Sbjct: 160  EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 44.6 bits (105), Expect = 2e-04
 Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 4/105 (3%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
            GL+ L    + + +++P+N+++     +++   DLG   ++ +  T+   + T    + A
Sbjct: 114  GLEDLQRERIVYRDLKPENILLDDRGHIRIS--DLGLAVQIPEGETVRGRVGTVG--YMA 169

Query: 1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
            PEV+  E      D W  G L Y ++ G SPFR + E   R+ V+
Sbjct: 170  PEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVD 214

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 44.5 bits (106), Expect = 2e-04
 Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 19/102 (18%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGC--------TQRVTKLGTLIH 1006
            VL GL+YLH  G  H +I+  N++++      VKL D G         ++R T +GT   
Sbjct: 107  VLLGLEYLHEEGKIHRDIKAANILLSE--EGDVKLADFGVSGQLTSTMSKRNTFVGT--- 161

Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
                  P + APEV+ +     + D+WS G+ A  L  G  P
Sbjct: 162  ------PFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPP 197

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 44.3 bits (104), Expect = 2e-04
 Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 3/100 (3%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            A  +  +L GL YLH     H +I+  NV+++     +VKL D G   ++T    +    
Sbjct: 104  ATILREILKGLDYLHSEKKIHRDIKAANVLLS--EHGEVKLADFGVAGQLTDT-QIKRNT 160

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
                P + APEV+ +     + D+WS G+ A  L  G  P
Sbjct: 161  FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPP 200

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 44.5 bits (106), Expect = 2e-04
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 486 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 531
           + QLLSG+ ++H   I H  L   +LL+ + G   L + DFGL+R 
Sbjct: 112 MLQLLSGVAHLHDNWILHRDLKTSNLLLNNRG--ILKICDFGLARE 155

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|191810 pfam07679, I-set, Immunoglobulin I-set domain

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           P F +KP  + V  G+     C   G+P P + WFK
Sbjct: 1   PKFTQKPKDVEVQEGESARFTCTVTGDPDPTVSWFK 36

Length = 90

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 44.7 bits (106), Expect = 2e-04
 Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 6/154 (3%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAK--VMTGKGNQYKSLFKNELDIMNQLCHR 240
           + Y+   ++G G  G+V+    R +G+  A K  V +      K +   E+ ++ QL H 
Sbjct: 1   EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHP 60

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRL 299
           NLV L + +  K    ++ E      +L+ L +      E+ I   I Q L  +++ H+ 
Sbjct: 61  NLVNLIEVFRRKRKLHLVFEYC-DHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH 119

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           +  H  + P ++L+   G   + L DFG +R +T
Sbjct: 120 NCIHRDVKPENILITKQG--QIKLCDFGFARILT 151

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 44.6 bits (105), Expect = 2e-04
 Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 8/164 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91

Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
           L P +++V       +L  DFGL+R   +   + P     RY R
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSFMMTP-YVVTRYYR 192

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 44.1 bits (104), Expect = 2e-04
 Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           F  ELG G  G+V H  +  +    A K +  +G   +  F  E  +M +L H  LV+L+
Sbjct: 8   FMKELGSGQFGVV-HLGKWRAQIKVAIKAIN-EGAMSEEDFIEEAKVMMKLSHPKLVQLY 65

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ-LLSGLDYMHRLSIAHLG 305
                +    I++E    G LL+ L ++      D+   + Q +  G++Y+ R S  H  
Sbjct: 66  GVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRD 125

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSR------RITSFGKLNPLEY 343
           L   + LV+  G   + ++DFG++R        +S G   P+++
Sbjct: 126 LAARNCLVSSTG--VVKVSDFGMTRYVLDDEYTSSSGAKFPVKW 167

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 44.5 bits (105), Expect = 2e-04
 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 8/104 (7%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI--NTPN 1012
            + +G+ YLH +   H ++   NV++ + R   VK+ D G  + V + G   + +  +  +
Sbjct: 116  ICEGMAYLHSQHYIHRDLAARNVLLDNDR--LVKIGDFGLAKAVPE-GHEYYRVREDGDS 172

Query: 1013 PEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
            P F  A E L E      +DVWS GV  Y LL+       QS P
Sbjct: 173  PVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSK--QSPP 214

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 44.6 bits (105), Expect = 2e-04
 Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 12/169 (7%)

Query: 169 ARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSG-------RNYAAKVMTGKGN 221
              ++ K + K   + ++F   LG G  G V  A  ++         R   +K++  K  
Sbjct: 16  DSTKEPKRKNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQK-- 73

Query: 222 QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD 281
           Q   +F +E  I+N + H   V L+ S++ +    ++ E   GGE    L R   +    
Sbjct: 74  QVDHVF-SERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDV 132

Query: 282 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
              Y  Q++   +Y+  L+I +  L P +LL+   G   + +TDFG ++
Sbjct: 133 GCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG--FIKMTDFGFAK 179

Length = 340

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 44.0 bits (104), Expect = 3e-04
 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 5/104 (4%)

Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNPEFAA 1017
            L YLH   + + +++P+N+++ S     V L D G C + +    T      TP  E+ A
Sbjct: 109  LGYLHSLNIIYRDLKPENILLDS--QGHVVLTDFGLCKEGIEHSKTTSTFCGTP--EYLA 164

Query: 1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            PEVL ++P     D W  G + Y +L G  PF  +   E   N+
Sbjct: 165  PEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNI 208

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 43.8 bits (104), Expect = 3e-04
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL   L  +  + EY    YI  ++   +Y+H   I +  L P +LL+   G  ++ 
Sbjct: 76  LGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNG--YVK 133

Query: 523 LTDFGLSRRITSFGK 537
           L DFG ++++ S  K
Sbjct: 134 LVDFGFAKKLKSGQK 148

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 44.6 bits (105), Expect = 3e-04
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 4/67 (5%)

Query: 463 PGGELLHSLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
           PGG+++  L R   + E D+A  YI +L   ++ +H++   H  + P ++L+   G  H+
Sbjct: 84  PGGDMMSLLIRMGIFPE-DLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG--HI 140

Query: 522 LLTDFGL 528
            LTDFGL
Sbjct: 141 KLTDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 43.8 bits (104), Expect = 3e-04
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 8/90 (8%)

Query: 1145 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV---NFVRYRFEYLFKE 1201
            PE L       ++D+WS G L Y L + + PF  +++ +    +    F R  + Y   E
Sbjct: 179  PEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRY-SSE 237

Query: 1202 LTQEATRFLMLIFKRAPGKRPTVEECHENR 1231
            L +     L +     P KRP+ EE  +  
Sbjct: 238  LNEVIKSMLNV----DPDKRPSTEELLQLP 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 43.9 bits (104), Expect = 3e-04
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 477 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
           ++E  +   + QLL GL Y+H   I H  L   +LL+   G   L + DFGL+R  
Sbjct: 105 FSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG--CLKIADFGLARTY 158

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 43.7 bits (103), Expect = 3e-04
 Identities = 31/149 (20%), Positives = 67/149 (44%), Gaps = 6/149 (4%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           ++G G  G       +  G+ Y  K +  +    + +   + E+ +++ + H N+V+  +
Sbjct: 7   KIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQE 66

Query: 248 SYETKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
           S+E   +  I+ +   GG+L   +  Q    + E  I  +  Q+   L ++H   I H  
Sbjct: 67  SFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRD 126

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           +   ++ +   G   + L DFG++R + S
Sbjct: 127 IKSQNIFLTKDGT--IKLGDFGIARVLNS 153

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 44.2 bits (104), Expect = 3e-04
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 5/112 (4%)

Query: 943  PTTHKDAYCVT-SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
              T +D  C +  V  G+++L  R   H ++   N+++ S  +V VK+ D G  + + K 
Sbjct: 175  VLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL-SENNV-VKICDFGLARDIYKD 232

Query: 1002 GTLIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
               +   +   P ++ APE + +     Q+DVWS GVL + + S GASP+ G
Sbjct: 233  PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 284

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 43.5 bits (103), Expect = 4e-04
 Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 472 TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
            RQ    E  I  Y+ QLL GL + H   I H  L P +LL+   G   L L DFGL+R
Sbjct: 90  DRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEG--VLKLADFGLAR 146

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 43.6 bits (103), Expect = 4e-04
 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GGEL   L+R+  ++E     Y  +++S L Y+H   + +  L   +L++   G  H+ +
Sbjct: 79  GGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG--HIKI 136

Query: 524 TDFGLSRRITSFG 536
           TDFGL +   S G
Sbjct: 137 TDFGLCKEGISDG 149

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 43.4 bits (103), Expect = 4e-04
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 473 RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
           R+    E  +  Y+ QLL  LD+MHR  I H  + P ++L+       L L DFG  R I
Sbjct: 93  RKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---DDILKLADFGSCRGI 149

Query: 533 TS 534
            S
Sbjct: 150 YS 151

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 43.5 bits (103), Expect = 4e-04
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 488 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
           QLL GL Y H+  + H  L P +LL++  G   L L DFGL+R
Sbjct: 111 QLLRGLAYCHQRRVLHRDLKPQNLLISERG--ELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 43.8 bits (103), Expect = 4e-04
 Identities = 21/71 (29%), Positives = 43/71 (60%), Gaps = 2/71 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GGE+   L ++  ++E ++  Y  +++  L+++H+L I +  +   ++L+   G  H++L
Sbjct: 89  GGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG--HVVL 146

Query: 524 TDFGLSRRITS 534
           TDFGLS+   S
Sbjct: 147 TDFGLSKEFLS 157

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 44.0 bits (104), Expect = 4e-04
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGG+++  L R   + E     YI +L   ++ +H++   H  + P ++L+   G  H+ 
Sbjct: 84  PGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIK 141

Query: 523 LTDFGL 528
           LTDFGL
Sbjct: 142 LTDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 43.8 bits (103), Expect = 4e-04
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)

Query: 1141 KEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLF 1199
            K  A E L +     Q+DVWS GVL + +++ G +P+ G + PE   N+    YR E   
Sbjct: 194  KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA-PERLFNLLKTGYRMERP- 251

Query: 1200 KELTQEATRFLMLIFKRAPGKRPTVEE 1226
            +  ++E    ++  +K+ P KRPT  +
Sbjct: 252  ENCSEEMYNLMLTCWKQEPDKRPTFAD 278

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 44.2 bits (104), Expect = 4e-04
 Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 3/109 (2%)

Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAA 1017
            L  +H R + H +++  N+ +  + +  +KL D G +++ +   +L +       P + A
Sbjct: 182  LDEVHSRKMMHRDLKSANIFL--MPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLA 239

Query: 1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
            PE+   +    + D+WS GV+ Y LL+   PF+G S+ E  Q V + +Y
Sbjct: 240  PELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY 288

Length = 478

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 43.3 bits (102), Expect = 4e-04
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
           C  N+V LH    ++DS  ++ + A GG+L   +++     E  +  +  +++  LD +H
Sbjct: 43  CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALH 102

Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
           R  I    L P ++L+   G  H+ LT F 
Sbjct: 103 REGIVCRDLNPNNILLDDRG--HIQLTYFS 130

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 43.9 bits (103), Expect = 4e-04
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 25  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84

Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 85  FTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 144

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 145 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 173

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 43.7 bits (103), Expect = 4e-04
 Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 9/146 (6%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLHD 247
           +G G  G V  A+++ +G   A K ++ +  Q +   K    EL ++  + H N++ L D
Sbjct: 23  VGSGAYGSVCSAIDKRTGEKVAIKKLS-RPFQSEIFAKRAYRELTLLKHMQHENVIGLLD 81

Query: 248 SYETKDSFTIISELAGGGELLH---SLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
            + +  S     +       +            +E  + + + Q+L GL Y+H   I H 
Sbjct: 82  VFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHR 141

Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L PG+L V       L + DFGL+R
Sbjct: 142 DLKPGNLAVNEDC--ELKILDFGLAR 165

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 43.8 bits (103), Expect = 5e-04
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 3/83 (3%)

Query: 1140 TKEQAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL 1198
            T+  APEVL +E  +    D WS GVL + +  G SPF  +   +  +N+ F + RF   
Sbjct: 160  TEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK- 218

Query: 1199 FKELTQEATRFLMLIFKRAPGKR 1221
               L+ E  +F+  +  R P  R
Sbjct: 219  -NVLSDEGRQFVKGLLNRNPQHR 240

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 43.5 bits (102), Expect = 5e-04
 Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGG+++  L ++   TE +   YI + +  +D +H+L   H  + P +LL+   G  H+ 
Sbjct: 84  PGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKG--HVK 141

Query: 523 LTDFGL 528
           L+DFGL
Sbjct: 142 LSDFGL 147

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 43.5 bits (102), Expect = 5e-04
 Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 2/89 (2%)

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           LV LH  ++T     ++ E   GG+L+  + RQ    E     Y  ++   L+++H   I
Sbjct: 58  LVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGI 117

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            +  L   ++L+   G  H+ LTD+G+ +
Sbjct: 118 IYRDLKLDNVLLDADG--HIKLTDYGMCK 144

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 43.4 bits (102), Expect = 5e-04
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 4/101 (3%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
            L GL +LH   + H +++P+N+++ S    QVKL D G   R+      + P+      +
Sbjct: 118  LRGLDFLHANCIVHRDLKPENILVTS--GGQVKLADFGLA-RIYSCQMALTPV-VVTLWY 173

Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
             APEVL +       D+WS G +   +      F G SE +
Sbjct: 174  RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 214

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 43.5 bits (102), Expect = 5e-04
 Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 4/103 (3%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            +Y +  +L G+++LH  G+ H +++P N+V+ S     +K++D G   R      ++ P 
Sbjct: 126  SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLA-RTACTNFMMTPY 182

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
                  + APEV+         D+WS G +   L+ G+  F+G
Sbjct: 183  VVTR-YYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG 224

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 43.5 bits (103), Expect = 5e-04
 Identities = 37/179 (20%), Positives = 73/179 (40%), Gaps = 11/179 (6%)

Query: 186 DFGDELGRGVTG--IVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRN 241
           +    +G+      IV+ A  + +    A K   +     +   L + E+    QL H N
Sbjct: 1   ELLTLIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPN 60

Query: 242 LVRLHDSYETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           ++    S+       ++S L   G  E L          E  IA  ++ +L+ LDY+H  
Sbjct: 61  ILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK 120

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRH-PWL 357
              H  +    +L++  G   ++L+    S  +   GK   + +D  + + ++++ PWL
Sbjct: 121 GFIHRSVKASHILLS--GDGKVVLSGLRYSVSMIKHGKRQRVVHD--FPKSSVKNLPWL 175

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 43.8 bits (103), Expect = 5e-04
 Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 36/131 (27%)

Query: 940  IVIPTTHKDAYCV----------------TSVLDGLQYLHWRGLCHLNIEPDNVVMASVR 983
            +++P    D YC                  SVL  +QYLH   + H +I+ +N+ +    
Sbjct: 160  LILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG 219

Query: 984  SVQVKLIDLGCTQRVTKLGTLIHPIN-TPNPEFA--------APEVLAEEPIFPQTDVWS 1034
             V        C   +   G    P++   N  +         APE+LA +P  P  D+WS
Sbjct: 220  DV--------C---LGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWS 268

Query: 1035 AGVLAYVLLSG 1045
            AG++ + + + 
Sbjct: 269  AGIVLFEMATC 279

Length = 391

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 43.2 bits (103), Expect = 6e-04
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 16/106 (15%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI-HPINTPNPE 1014
            L GL Y H   + H +++P N+++   R   +KL D G       L      P+ T   E
Sbjct: 108  LRGLAYCHSHRILHRDLKPQNILIN--RDGVLKLADFG-------LARAFGIPLRTYTHE 158

Query: 1015 FA-----APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1054
                   APE+L     +    D+WS G +   +++G   F G SE
Sbjct: 159  VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSE 204

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 43.3 bits (102), Expect = 6e-04
 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 17/85 (20%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE-- 1201
            APE+L E    P  D W+ GVL Y +++G  PF   +E +           FE +  +  
Sbjct: 164  APEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL----------FESILHDDV 213

Query: 1202 -----LTQEATRFLMLIFKRAPGKR 1221
                 L++EA   L     + P KR
Sbjct: 214  LYPVWLSKEAVSILKAFMTKNPNKR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 43.1 bits (101), Expect = 6e-04
 Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 23/167 (13%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAA----KVMTGKGNQYKSLFKNELDIMNQLC-- 238
           Y+   E+G G  G V+ A +  +G  + A    +V TG+     S  + E+ ++  L   
Sbjct: 3   YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETF 61

Query: 239 -HRNLVRLHD-------SYETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQ 288
            H N+VRL D         ETK   T++ E         L  +      TE  I   + Q
Sbjct: 62  EHPNVVRLFDVCTVSRTDRETK--LTLVFEHVDQDLTTYLDKVPEPGVPTE-TIKDMMFQ 118

Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
           LL GLD++H   + H  L P ++LV   G   + L DFGL+ RI SF
Sbjct: 119 LLRGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLA-RIYSF 162

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 43.5 bits (102), Expect = 6e-04
 Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 18/161 (11%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMN 235
           + + Y     +G G  G V  A +  +G   A K ++     ++S+        EL ++ 
Sbjct: 15  VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLK 71

Query: 236 QLCHRNLVRLHDSYETKDSFT------IISELAGGGELLHSLTRQSYYTEYDIAHYIRQL 289
            + H N++ L D +    S        +++ L G    L+++ +    T+  +   I Q+
Sbjct: 72  HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQI 129

Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           L GL Y+H   I H  L P +L V       L + DFGL+R
Sbjct: 130 LRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKILDFGLAR 168

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 42.8 bits (101), Expect = 6e-04
 Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 7/146 (4%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           F  ELG G  G+V+    R    + A K++  +G   +  F  E  +M +L H NLV+L+
Sbjct: 8   FLKELGSGQFGVVHLGKWRGK-IDVAIKMIR-EGAMSEDDFIEEAKVMMKLSHPNLVQLY 65

Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
                +    I++E    G LL+ L  R+       +      +   ++Y+      H  
Sbjct: 66  GVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRD 125

Query: 306 LTPGDLLVAHPGGRHLL-LTDFGLSR 330
           L   + LV   G  +++ ++DFGL+R
Sbjct: 126 LAARNCLV---GEDNVVKVSDFGLAR 148

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 43.3 bits (102), Expect = 6e-04
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 19/166 (11%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAK----VMTGKGNQYKSLFKNELDIMNQLC 238
           DAY+  +++G G  G VY A ++++G+  A K     M  +G    +L   E+ ++  L 
Sbjct: 1   DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTAL--REISLLQMLS 58

Query: 239 HRN-LVRLHDSYETKDSFTIISELAGGGELLHSLTRQ---SYY-------TEYDIAHYIR 287
               +VRL D    ++     S L    E L S  ++   S             I  ++ 
Sbjct: 59  ESIYIVRLLDVEHVEEKNGKPS-LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMY 117

Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           QLL G+ + H+  + H  L P +LLV    G  L + D GL R  +
Sbjct: 118 QLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGL-LKIADLGLGRAFS 162

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 43.1 bits (101), Expect = 6e-04
 Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 5/112 (4%)

Query: 943  PTTHKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
              T KD   C   V  G++YL  +   H ++   NV++    +  +K+ D G  + V  +
Sbjct: 133  QMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT--ENNVMKIADFGLARDVNNI 190

Query: 1002 GTLIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
                   N   P ++ APE L +     Q+DVWS GVL + + + G SP+ G
Sbjct: 191  DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 242

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 42.8 bits (101), Expect = 7e-04
 Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 24/113 (21%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT--------QRVTK 1000
             Y    +L+ L +LH   + H +++  N+++       VKL D G +        +R T 
Sbjct: 106  RYVCRQMLEALNFLHSHKVIHRDLKAGNILLT--LDGDVKLADFGVSAKNKSTLQKRDTF 163

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEE-----PIFPQTDVWSAGVLAYVLLSGASP 1048
            +GT         P + APEV+A E     P   + D+WS G+    L     P
Sbjct: 164  IGT---------PYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPP 207

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 42.7 bits (101), Expect = 7e-04
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 477 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
           +T  +I   ++ LL+GL Y+HR  I H  +   ++L+   G   L L DFGL+R
Sbjct: 116 FTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDG--ILKLADFGLAR 167

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 43.3 bits (102), Expect = 7e-04
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGG+L+  L +   ++E     Y+ + +  ++ +H+L   H  + P ++L+   G  H+ 
Sbjct: 84  PGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGG--HIK 141

Query: 523 LTDFGLSRRITSFGKLNPLEY 543
           L+DFGLS   T F K +   Y
Sbjct: 142 LSDFGLS---TGFHKQHDSAY 159

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 42.7 bits (100), Expect = 7e-04
 Identities = 42/178 (23%), Positives = 68/178 (38%), Gaps = 22/178 (12%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGG +   L      TE     Y RQ+L G+ Y+H   I H  +   ++L    G  ++ 
Sbjct: 89  PGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAG--NVK 146

Query: 523 LTDFGLSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGH-------------TP 569
           L DFG S+R+ +         G G   V  TP     + I+  G+               
Sbjct: 147 LGDFGASKRLQTI-----CMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVE 201

Query: 570 TLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKF--SVVVKAAEKANTENLV 625
            L + PP   Y    +  + +T+P   +       H   F   + V+A  + + E L+
Sbjct: 202 MLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFLGCIFVEARHRPSAEELL 259

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 42.7 bits (100), Expect = 7e-04
 Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 5/128 (3%)

Query: 184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKSLFKNELDIMNQLCHRN 241
           AY F   +G+G  G V     R+ G+ Y  K +  +    + +   + E  +++QL H N
Sbjct: 1   AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPN 60

Query: 242 LVRLHDSYETKDS-FTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHR 298
           +V   +S+E +D    I+     GG+L H L  Q      E  +  +  Q+   L Y+H 
Sbjct: 61  IVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE 120

Query: 299 LSIAHLGL 306
             I H  L
Sbjct: 121 KHILHRDL 128

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 42.8 bits (101), Expect = 7e-04
 Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 9/150 (6%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRN----YAAKVM-TGKGNQYKSLFKNELDIMNQLCHRN 241
               LG G  G VY  V    G       A KV+      +      +E  +M  + H +
Sbjct: 11  KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPH 70

Query: 242 LVRLHDSYETKDSFTIISELAGGGELL-HSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           +VRL     +     +I++L   G LL +    +       + ++  Q+  G+ Y+    
Sbjct: 71  VVRLLGICLSS-QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR 129

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           + H  L   ++LV  P  +H+ +TDFGL++
Sbjct: 130 LVHRDLAARNVLVKTP--QHVKITDFGLAK 157

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 42.8 bits (101), Expect = 7e-04
 Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 6/149 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  G+V     + +G+  A K      +    K +   E+ ++ QL H NLV L + 
Sbjct: 9   VGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEV 68

Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD-IAHYIRQLLSGLDYMHRLSIAHLGLT 307
           +  K    ++ E      +L  L +     +   +  Y+ Q+L G+++ H  +I H  + 
Sbjct: 69  FRRKKRLYLVFEFVDH-TVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIK 127

Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           P ++LV+  G   + L DFG +R + + G
Sbjct: 128 PENILVSQSG--VVKLCDFGFARTLAAPG 154

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 42.6 bits (100), Expect = 7e-04
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 5/147 (3%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           F  ELG G  G+V +   R  G+   A  M  +G+  +  F  E  +M +L H  LV+L+
Sbjct: 8   FLKELGTGQFGVVKYGKWR--GQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLY 65

Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
                +    I++E    G LL+ L      +    +    + +  G+ Y+      H  
Sbjct: 66  GVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRD 125

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L   + LV   G   + ++DFGLSR +
Sbjct: 126 LAARNCLVDDQGC--VKVSDFGLSRYV 150

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 43.3 bits (102), Expect = 7e-04
 Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 16/127 (12%)

Query: 937  YLPIVIPTTHKDAYCVT-SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT 995
            Y+    P   + A  +   +L+ L YLH RG+ H +++ +N+ +    +    L D G  
Sbjct: 175  YVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAV--LGDFGAA 232

Query: 996  QRVTKLGTLIHPINTPNP-------EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
             ++       HP +TP         E  +PE+LA +P   +TD+WSAG++ + +      
Sbjct: 233  CKLDA-----HP-DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVT 286

Query: 1049 FRGQSEP 1055
              G+   
Sbjct: 287  LFGKQVK 293

Length = 392

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 42.3 bits (100), Expect = 8e-04
 Identities = 19/70 (27%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GG+L + L+++  ++E  +  +I +++  L+Y+H   I H  + P ++L+   G  H+ +
Sbjct: 84  GGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQG--HVHI 141

Query: 524 TDFGLSRRIT 533
           TDF ++ ++T
Sbjct: 142 TDFNIATKVT 151

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 42.8 bits (101), Expect = 8e-04
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGGEL   L     ++      Y  +++  L+Y+H   I +  L P ++L+   G  H+ 
Sbjct: 84  PGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG--HIK 141

Query: 523 LTDFGLSRRI 532
           LTDFG ++++
Sbjct: 142 LTDFGFAKKL 151

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 42.5 bits (101), Expect = 8e-04
 Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 13/92 (14%)

Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRF---EYL 1198
            APE L ++ IF  ++DVWS GVL + + + GA+P+ G S  E  + +    YR    EY 
Sbjct: 175  APESL-KDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLR-KGYRLPKPEYC 232

Query: 1199 FKELTQEATRFLML-IFKRAPGKRPTVEECHE 1229
              EL +     LML  ++  P  RPT  E  E
Sbjct: 233  PDELYE-----LMLSCWQLDPEDRPTFSELVE 259

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 42.7 bits (100), Expect = 8e-04
 Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 18/152 (11%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +    +  A K ++     ++SL        EL ++  + H N++ L
Sbjct: 23  VGSGAYGSVCSAYDTRLRQKVAVKKLS---RPFQSLIHARRTYRELRLLKHMKHENVIGL 79

Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    ++  +   I QLL GL Y+H  
Sbjct: 80  LDVFTPATSIENFNEVYLVTNLMGAD--LNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSA 137

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
            I H  L P ++ V       L + DFGL+R+
Sbjct: 138 GIIHRDLKPSNVAVNEDC--ELRILDFGLARQ 167

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 41.7 bits (99), Expect = 0.001
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 60  YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVE 106
           Y+  ++LG G  G VY A ++ +G+  A KV+  K        +  E
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILRE 47

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 42.2 bits (100), Expect = 0.001
 Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 20/104 (19%)

Query: 955  VLDGLQYLH-WRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CT--QRVTKLGTLI 1005
            +L GL YLH  R + H +I+P N+++ S    +VK+ D G       T  Q  T +GT+ 
Sbjct: 108  ILKGLDYLHTKRHIIHRDIKPSNLLINS--KGEVKIADFGISKVLENTLDQCNTFVGTVT 165

Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
                     + +PE +  E      D+WS G+       G  PF
Sbjct: 166  ---------YMSPERIQGESYSYAADIWSLGLTLLECALGKFPF 200

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 42.3 bits (100), Expect = 0.001
 Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 9/105 (8%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI---HPINTPN 1012
            L G+ Y+H  G+ H +++P N+++++     +K+ D G   R+          H + T  
Sbjct: 109  LKGVAYMHANGIMHRDLKPANLLISA--DGVLKIADFGLA-RLFSEEEPRLYSHQVAT-- 163

Query: 1013 PEFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
              + APE+L     + P  D+W+ G +   LL+G+  F G+++ E
Sbjct: 164  RWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE 208

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 42.3 bits (100), Expect = 0.001
 Identities = 25/78 (32%), Positives = 31/78 (39%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APEVL  +      D WS GV AY  L G  P+RG S     Q                +
Sbjct: 167  APEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWS 226

Query: 1204 QEATRFLMLIFKRAPGKR 1221
             EA   +  + +R P KR
Sbjct: 227  TEAIDAINKLLERDPQKR 244

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 42.4 bits (99), Expect = 0.001
 Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GGEL   L+R+  ++E     Y  +++S LDY+H   I +  L   +L++   G  H+ +
Sbjct: 79  GGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG--HIKI 136

Query: 524 TDFGLSR 530
           TDFGL +
Sbjct: 137 TDFGLCK 143

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 42.6 bits (100), Expect = 0.001
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GGEL   L ++  ++E     YI +L+  L+++H+  I +  L P ++L+   G  H+ L
Sbjct: 80  GGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG--HIAL 137

Query: 524 TDFGLSR 530
            DFGLS+
Sbjct: 138 CDFGLSK 144

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 42.1 bits (99), Expect = 0.001
 Identities = 33/156 (21%), Positives = 68/156 (43%), Gaps = 18/156 (11%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--- 241
           ++F   LG+G  G V  A  + +   YA K++       K +   + D+   +  +    
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILK------KDVIIQDDDVECTMVEKRVLA 55

Query: 242 -------LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
                  L +LH  ++T D    + E   GG+L++ + +   + E     Y  ++  GL 
Sbjct: 56  LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLF 115

Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           ++H   I +  L   ++++   G  H+ + DFG+ +
Sbjct: 116 FLHSKGIIYRDLKLDNVMLDAEG--HIKIADFGMCK 149

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 41.9 bits (98), Expect = 0.001
 Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GG+L + L++   ++E ++  Y  +++ GL++MH   + +  L P ++L+   G  H+ +
Sbjct: 81  GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRI 138

Query: 524 TDFGLSRRITSFGKLNP 540
           +D GL+     F K  P
Sbjct: 139 SDLGLA---CDFSKKKP 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 42.7 bits (100), Expect = 0.001
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 1/84 (1%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN-FVRYRFEYLFKEL 1202
            APEVL  +      D W  G L Y ++ G SPFRG+ E   R+ V+  V    E    + 
Sbjct: 169  APEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKF 228

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEE 1226
            ++EA     ++  + P +R   +E
Sbjct: 229  SEEAKSICKMLLTKDPKQRLGCQE 252

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 42.2 bits (99), Expect = 0.001
 Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)

Query: 953  TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK----LGTLIHPI 1008
              ++ GL+++H R + + +++P N+++     V++  + L C     K    +GT  H  
Sbjct: 104  AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT--H-- 159

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVW-SAGVLAYVLLSGASPFRG 1051
                  + APEVL +   +  +  W S G + + LL G SPFR 
Sbjct: 160  -----GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 42.2 bits (99), Expect = 0.001
 Identities = 20/89 (22%), Positives = 45/89 (50%), Gaps = 2/89 (2%)

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           L  L+ +++TK+    + E   GG+L+  +  +  +  Y    Y  +++ GL ++H   I
Sbjct: 58  LTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGI 117

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            +  L   ++++   G  H+ + DFG+ +
Sbjct: 118 IYRDLKLDNVMLDRDG--HIKIADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 42.7 bits (100), Expect = 0.001
 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGG+++  L ++   +E     YI + +  +D +H+L   H  + P +LL+   G  H+ 
Sbjct: 84  PGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKG--HVK 141

Query: 523 LTDFGL 528
           L+DFGL
Sbjct: 142 LSDFGL 147

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 42.4 bits (100), Expect = 0.001
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 468 LHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
           LH + R     T+     +I Q+L GL Y+H  ++ H  L PG+LLV       L + DF
Sbjct: 92  LHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC--ELKICDF 149

Query: 527 GLSRRI 532
           GL+R  
Sbjct: 150 GLARGF 155

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 42.3 bits (99), Expect = 0.001
 Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 18/161 (11%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----SLFKNELDIMNQLCHR 240
           Y+    +GRG  G V     +S+ + YA K+++ K    K    + F  E DIM      
Sbjct: 45  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS-KFEMIKRSDSAFFWEERDIMAFANSP 103

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH-----YIRQLLSGLDY 295
            +V+L  +++      ++ E   GG+L++ +      + YD+       Y  +++  LD 
Sbjct: 104 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM------SNYDVPEKWARFYTAEVVLALDA 157

Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           +H +   H  + P ++L+   G  HL L DFG   ++   G
Sbjct: 158 IHSMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEG 196

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 41.9 bits (98), Expect = 0.001
 Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 16/92 (17%)

Query: 450 DVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 509
           D++T+ D VP  G   E +  L              +RQ L GLD++H   I H  L P 
Sbjct: 92  DLRTYLDKVPPPGLPAETIKDL--------------MRQFLRGLDFLHANCIVHRDLKPE 137

Query: 510 DLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL 541
           ++LV   G   + L DFGL+R  +    L P+
Sbjct: 138 NILVTSGG--QVKLADFGLARIYSCQMALTPV 167

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 42.6 bits (100), Expect = 0.001
 Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 29/169 (17%)

Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHRNLVRLHD 247
           E G+ V    +    R+     A K++    +    + L  +E +++ Q+ H ++++L+ 
Sbjct: 12  EFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLL-SEFNLLKQVNHPHVIKLYG 70

Query: 248 SYETKDSFTIISELAGGGELLHSL---------------TRQSYY---------TEYDIA 283
           +        +I E A  G L   L                R S Y         T  D+ 
Sbjct: 71  ACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLI 130

Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            +  Q+  G+ Y+  + + H  L   ++LVA   GR + ++DFGLSR +
Sbjct: 131 SFAWQISRGMQYLAEMKLVHRDLAARNVLVAE--GRKMKISDFGLSRDV 177

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 42.6 bits (100), Expect = 0.001
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGC-TQRVTKLGTLIHPINTPN 1012
            +V+ GL YL    + H +++P N+ + + R  QVKL D G  TQ V  +       N   
Sbjct: 103  AVVKGLTYLWSLKILHRDVKPSNM-LVNTRG-QVKLCDFGVSTQLVNSIAKTYVGTNA-- 158

Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
              + APE ++ E     +DVWS G+    L  G  P+
Sbjct: 159  --YMAPERISGEQYGIHSDVWSLGISFMELALGRFPY 193

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 42.6 bits (100), Expect = 0.001
 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 25/116 (21%)

Query: 947  KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQR--------- 997
            K  Y V  +L GL+Y+H  G+ H +++P N  +A     ++K++D G  +          
Sbjct: 118  KVQYLVYQMLCGLKYIHSAGIIHRDLKPGN--LAVNEDCELKILDFGLARHADAEMTGYV 175

Query: 998  VTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
            VT+              + APEV+     + QT D+WS G +   +L+G + F+G+
Sbjct: 176  VTRW-------------YRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 218

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 42.4 bits (100), Expect = 0.001
 Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 24/170 (14%)

Query: 187 FGDELGRGVTGIVYHA-----VERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHR 240
           F +ELG G  G VY        ER S  + A K +      + +  F+ E ++M+ L H 
Sbjct: 9   FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHP 68

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEY----------------DIAH 284
           N+V L      +    ++ E    G+L   L R S +++                 D  H
Sbjct: 69  NIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLH 128

Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
              Q+ +G++Y+      H  L   + LV    G  + ++DFGLSR I S
Sbjct: 129 IAIQIAAGMEYLSSHHFVHRDLAARNCLVGE--GLTVKISDFGLSRDIYS 176

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 42.4 bits (100), Expect = 0.001
 Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 10/109 (9%)

Query: 947  KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH 1006
            K    +   L  L+  H  G+ H +++P N+++ +  S  VKL D G + R+    +   
Sbjct: 118  KMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDA--SGNVKLCDFGISGRLVD--SKAK 171

Query: 1007 PINTPNPEFAAPEVLAEEPIFP----QTDVWSAGVLAYVLLSGASPFRG 1051
              +     + APE +      P    + DVWS G+    L +G  P++ 
Sbjct: 172  TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKN 220

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 42.2 bits (100), Expect = 0.001
 Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 3/101 (2%)

Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
            +M    + N ++L+ S  T     +I +    G+L   L ++   +E ++   IRQL+ 
Sbjct: 63  QLMK--DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVE 120

Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            L+ +H+ +I H  +   ++L        + L D+GL + I
Sbjct: 121 ALNDLHKHNIIHNDIKLENVLY-DRAKDRIYLCDYGLCKII 160

Length = 267

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 42.1 bits (99), Expect = 0.001
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 1141 KEQAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLF 1199
            K  APE L       ++DVWS G+L +   S G +P+ G S  +TR+ +    YR     
Sbjct: 160  KWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE-SGYRMPA-- 216

Query: 1200 KELTQEATRFLML-IFKRAPGKRPTVEECHE 1229
             +L  E    LML  +   P  RP+  E + 
Sbjct: 217  PQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 42.0 bits (99), Expect = 0.001
 Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 7/147 (4%)

Query: 186 DFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
             G  +G+G  G V     R  G+  A K +       ++ F  E  +M  L H NLV+L
Sbjct: 9   KLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQA-FLAEASVMTTLRHPNLVQL 65

Query: 246 HDSYETKDSFTIISELAGGGELLHSL-TR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
                  +   I++E    G L+  L +R ++  T      +   +  G++Y+   +  H
Sbjct: 66  LGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVH 125

Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSR 330
             L   ++LV+        ++DFGL++
Sbjct: 126 RDLAARNVLVSEDLVAK--VSDFGLAK 150

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 41.9 bits (98), Expect = 0.001
 Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 8/122 (6%)

Query: 936  CYLPIVIPT---THKD-AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLID 991
            CY P  +P    + KD   C   V  G++YL  +   H ++   NV++     +  K+ D
Sbjct: 126  CYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM--KIAD 183

Query: 992  LGCTQRVTKLGTLIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPF 1049
             G  + +  +       N   P ++ APE L +     Q+DVWS GVL + + + G SP+
Sbjct: 184  FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 243

Query: 1050 RG 1051
             G
Sbjct: 244  PG 245

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 41.9 bits (98), Expect = 0.001
 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 4/118 (3%)

Query: 936  CYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT 995
            C LP    T      C   V  G++YL  +   H ++   NV++     +  K+ D G  
Sbjct: 124  CKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVM--KIADFGLA 181

Query: 996  QRVTKLGTLIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
            + V  +       N   P ++ APE L +     Q+DVWS GVL + + + G SP+ G
Sbjct: 182  RDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 239

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 41.3 bits (98), Expect = 0.002
 Identities = 17/83 (20%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            +PE+   +P   ++D+WS G + Y L +   PF G++  E    +  ++ ++  +  + +
Sbjct: 171  SPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKI--LKGQYPPIPSQYS 228

Query: 1204 QEATRFLMLIFKRAPGKRPTVEE 1226
             E    +  + ++ P +RP++ +
Sbjct: 229  SELRNLVSSLLQKDPEERPSIAQ 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 1144 APEVLA---EEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF- 1195
            APEVL           +D+WS G+  Y LL+G  PF G+       +T + +  +     
Sbjct: 176  APEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL 235

Query: 1196 -----EYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLG 1250
                     + +++ A+  L  +  + P  R +      +  L   +         +   
Sbjct: 236  ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPD 295

Query: 1251 NRLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQEELISTAFTSHLVNKPSSDSS 1308
            +           L+    + +SL+     L   +S   + ++    S   +  SS   
Sbjct: 296  DSAPLRLSLPPSLEALISSLNSLAISGSDLKLDDSNFSKELAPNGVSSSPHNSSSLLL 353

Length = 384

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 41.9 bits (98), Expect = 0.002
 Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GGEL   L+R+  +TE     Y  +++S L+Y+H   + +  +   +L++   G  H+ +
Sbjct: 79  GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKI 136

Query: 524 TDFGLSR 530
           TDFGL +
Sbjct: 137 TDFGLCK 143

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 41.5 bits (98), Expect = 0.002
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)

Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
           TE  I  Y+ QLL G++Y+H   I H  +   ++L+ + G   L + DFGL+R
Sbjct: 113 TESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQG--ILKIADFGLAR 163

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 41.5 bits (97), Expect = 0.002
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 7/137 (5%)

Query: 955  VLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
            ++  L YLH  + + + +++ +N+++   +   +K+ D G  +   K G  +       P
Sbjct: 104  IVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKTF-CGTP 160

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
            E+ APEVL +       D W  GV+ Y ++ G  PF  Q   +  + +     RF    +
Sbjct: 161  EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---R 217

Query: 1074 ELTQEATRFLMLIFKHE 1090
             L+ EA   L  + K +
Sbjct: 218  TLSPEAKSLLSGLLKKD 234

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 41.7 bits (98), Expect = 0.002
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%)

Query: 463 PGGELLHSLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
           PGG+LL  L R     + D+A  Y+ +L+  +  +H++   H  + P ++L+   G  H+
Sbjct: 84  PGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTG--HI 141

Query: 522 LLTDFGLSRRITSFGKLNPL 541
            L DFG + R+T+   +N  
Sbjct: 142 KLADFGSAARLTANKMVNSK 161

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 41.9 bits (98), Expect = 0.002
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGG+++  L R   + E     YI +L   ++ +H++   H  + P ++L+   G  H+ 
Sbjct: 84  PGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDG--HIK 141

Query: 523 LTDFGL 528
           LTDFGL
Sbjct: 142 LTDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 41.2 bits (96), Expect = 0.002
 Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 20/144 (13%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGG +   L      TE     Y RQ+L G+ Y+H   I H  +   ++L    G  ++ 
Sbjct: 89  PGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAG--NVK 146

Query: 523 LTDFGLSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGH-------------TP 569
           L DFG S+RI +         G G   V  TP     + I+  G+               
Sbjct: 147 LGDFGASKRIQTI-----CMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVE 201

Query: 570 TLAQDPPPLNYSVEDSPIEWSTEP 593
            L + PP   Y    +  + +T+P
Sbjct: 202 MLTEKPPWAEYEAMAAIFKIATQP 225

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 41.5 bits (97), Expect = 0.002
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN-FVRYRFEYLFKEL 1202
            APEV+  E      D W  G L Y ++ G SPFR + E   R+ V+  V+   E   ++ 
Sbjct: 169  APEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKF 228

Query: 1203 TQEATRFLMLIFKRAPGKR 1221
            +++A     ++  + P +R
Sbjct: 229  SEDAKSICRMLLTKNPKER 247

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 41.5 bits (97), Expect = 0.002
 Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 12/151 (7%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCH-RNLVRLHDSY 249
           +G G  G VY      +G+  A KVM    ++ + + K E++++ +  H RN+   + ++
Sbjct: 24  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEI-KLEINMLKKYSHHRNIATYYGAF 82

Query: 250 ETK------DSFTIISELAGGGEL--LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
             K      D   ++ E  G G +  L   T+ +   E  IA+  R++L GL ++H   +
Sbjct: 83  IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKV 142

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            H  +   ++L+       + L DFG+S ++
Sbjct: 143 IHRDIKGQNVLLTE--NAEVKLVDFGVSAQL 171

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 41.9 bits (98), Expect = 0.002
 Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 11/105 (10%)

Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK--LGTLIHP 1007
            + V  +L GL+Y+H  G+ H +++P N  +A     ++K++D G  ++      G ++  
Sbjct: 122  FLVYQMLKGLKYIHAAGIIHRDLKPGN--LAVNEDCELKILDFGLARQTDSEMTGYVV-- 177

Query: 1008 INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
                   + APEV+     + QT D+WS G +   +L+G   F+G
Sbjct: 178  ----TRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG 218

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 41.8 bits (98), Expect = 0.002
 Identities = 45/159 (28%), Positives = 64/159 (40%), Gaps = 17/159 (10%)

Query: 191 LGRGVTGIVYHA-----VERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLV 243
           LG G  G VY       +   SG    A     KG  +Q K  F  E  +M+   H N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS-------GLDYM 296
           +L       +   II EL  GG+LL  L              +++LL        G  Y+
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL 122

Query: 297 HRLSIAHLGLTPGDLLVAHPGG---RHLLLTDFGLSRRI 332
            ++   H  L   + LV+  G    R + + DFGL+R I
Sbjct: 123 EQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDI 161

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 41.9 bits (98), Expect = 0.002
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 4/103 (3%)

Query: 951  CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINT 1010
            C   V  G++YL  R   H ++   NV++     +  K+ D G  + V  +       N 
Sbjct: 139  CAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVM--KIADFGLARGVHDIDYYKKTSNG 196

Query: 1011 PNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
              P ++ APE L +     Q+DVWS G+L + + + G SP+ G
Sbjct: 197  RLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPG 239

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 42.2 bits (99), Expect = 0.002
 Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 19/137 (13%)

Query: 940  IVIPTTHKDAYC-------------VTSV----LDGLQYLHWRGLCHLNIEPDNVVMASV 982
            +V+P    D Y              VT+V    L  + Y+H  G+ H +I+ +NV++   
Sbjct: 237  LVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGP 296

Query: 983  RSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAY-V 1041
              + +      C  R +   T  H       +  APEVLA +P  P  D+WSAG++ +  
Sbjct: 297  EDICLGDFGAACFARGSW-STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEA 355

Query: 1042 LLSGASPFRGQSEPETR 1058
             +  AS F      E R
Sbjct: 356  AVHTASLFSASRGDERR 372

Length = 461

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 41.5 bits (97), Expect = 0.002
 Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 8/157 (5%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  G+V     + +    A K    + +  + K     EL ++  L   N+V L ++
Sbjct: 9   VGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEA 68

Query: 249 YETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
           +  +    ++ E       ELL  +       +  +  YI QL+  + + H+  I H  +
Sbjct: 69  FRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEK--VRSYIYQLIKAIHWCHKNDIVHRDI 126

Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEY 343
            P +LL++H     L L DFG +R ++     N  EY
Sbjct: 127 KPENLLISH--NDVLKLCDFGFARNLSEGSNANYTEY 161

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 41.3 bits (97), Expect = 0.002
 Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 16/157 (10%)

Query: 191 LGRGVTGIVYHAVER-----SSGRNYAAKVMTGKGNQYKSL-FKNELDIMNQLCHRNLVR 244
           LG G  G VY  + R     +     A K +    ++     F  E  IM++  H+N+VR
Sbjct: 14  LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVR 73

Query: 245 LHD-SYETKDSFTIISELAGGGELLHSL-------TRQSYYTEYDIAHYIRQLLSGLDYM 296
           L   S+E    F I+ EL  GG+L   L        R S  T  D+    R +  G  Y+
Sbjct: 74  LIGVSFERLPRF-ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL 132

Query: 297 HRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI 332
                 H  +   + L+   G GR   + DFG++R I
Sbjct: 133 EENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDI 169

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 41.4 bits (97), Expect = 0.002
 Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 13/148 (8%)

Query: 191 LGRGVTGIVYHAVERSSGR--NYAA--KVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +G G  G V     +  G+   + A   + +G   + +  F +E  IM Q  H N++ L 
Sbjct: 12  IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
                     II+E    G  L S  RQ+   +T   +   +R + +G+ Y+  ++  H 
Sbjct: 72  GVVTKSRPVMIITEFMENGA-LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHR 130

Query: 305 GLTPGDLLVAHPGGRHLL--LTDFGLSR 330
            L   ++LV      +L+  ++DFGLSR
Sbjct: 131 DLAARNILV----NSNLVCKVSDFGLSR 154

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 41.3 bits (95), Expect = 0.003
 Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 8/113 (7%)

Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHE-RI 655
            Y+ + ++  G F  V  A ++      V AK  E     + +   E   L SL H   I
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60

Query: 656 ASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE---YTEQNVATIISQ 705
             L + ++          LVME + G  +   L         +E     I++Q
Sbjct: 61  VKLYDFFQD----EGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQ 109

Length = 384

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 40.9 bits (96), Expect = 0.003
 Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY-SHDTLHQVNTEFDNLRSLRH 652
           P D ++ I E+  G F  V KA  K  T    AAK+ +  S + L     E D L   +H
Sbjct: 3   PNDIWEIIGELGDGAFGKVYKAQHK-ETGLFAAAKIIQIESEEELEDFMVEIDILSECKH 61

Query: 653 ERIASLLEAY 662
             I  L EAY
Sbjct: 62  PNIVGLYEAY 71

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 40.7 bits (96), Expect = 0.003
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 473 RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
                TE +IA  + Q L GL+Y+H     H  +  G++L+   G     L DFG+S ++
Sbjct: 92  TNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEG--QAKLADFGVSGQL 149

Query: 533 TS 534
           T 
Sbjct: 150 TD 151

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 41.0 bits (96), Expect = 0.003
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 9/82 (10%)

Query: 463 PGGELLHSLTRQSY----YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
           PGG L  +L R  +      E  I  Y +Q+L GL Y+H   I H  +   ++LV    G
Sbjct: 88  PGGSL-SALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSG 146

Query: 519 RHLLLTDFGLSRRITSFGKLNP 540
             + ++DFG S+R+     +NP
Sbjct: 147 V-VKISDFGTSKRL---AGINP 164

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 40.8 bits (96), Expect = 0.003
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 6/71 (8%)

Query: 485 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYG 544
           Y  QLL GL Y+H   I H  + P ++ + H G   + L DFG + ++ +    N    G
Sbjct: 104 YTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG--VIKLGDFGCAVKLKN----NTTTMG 157

Query: 545 NGQYKVAVTPA 555
                +A TPA
Sbjct: 158 EEVQSLAGTPA 168

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 40.8 bits (96), Expect = 0.003
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 467 LLHSLTRQSYYTEYD-IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTD 525
           LL  L         D +  YI QLL  + Y H  +I H  + P ++LV+  G   L L D
Sbjct: 86  LLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESG--VLKLCD 143

Query: 526 FGLSRRITSFGKLNPLEY 543
           FG +R + +       +Y
Sbjct: 144 FGFARALRARPASPLTDY 161

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 41.1 bits (96), Expect = 0.003
 Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GG+L + L++   ++E ++  Y  +++ GL++MH   + +  L P ++L+   G  H+ +
Sbjct: 81  GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRI 138

Query: 524 TDFGLSRRITSFGKLNP 540
           +D GL+     F K  P
Sbjct: 139 SDLGLA---CDFSKKKP 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 40.7 bits (95), Expect = 0.003
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 12/109 (11%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGG +   L R     E     Y +Q+L G+ Y+H   + H  +   ++++  P G  + 
Sbjct: 85  PGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM-PNGI-IK 142

Query: 523 LTDFGLSRRITSFG----KLNPLEYGNGQYKVAVTPAMKHLQAITEAGH 567
           L DFG +RR+   G      N L+  +G      TP     + I E+G+
Sbjct: 143 LIDFGCARRLAWVGLHGTHSNMLKSMHG------TPYWMAPEVINESGY 185

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 40.7 bits (95), Expect = 0.003
 Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 7/144 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNEL---DIMNQLCHRNLVRLHD 247
           LG+G  G V     +++G+ YA K +  K  + KS  K  L   +I+ ++    +V L  
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAY 60

Query: 248 SYETKDSFTIISELAGGGEL-LHSLTRQSYYTEYD-IAHYIRQLLSGLDYMHRLSIAHLG 305
           ++E+K    ++  L  GG+L  H         E + + HY  Q+  G+ ++H + I +  
Sbjct: 61  AFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRD 120

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLS 329
           + P ++L+   G  +  L+D GL+
Sbjct: 121 MKPENVLLDDQG--NCRLSDLGLA 142

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 41.0 bits (96), Expect = 0.003
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 10/150 (6%)

Query: 190 ELGRGVTGIV----YHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVR 244
            LG G  G V    Y      +G   A K +    G Q  S +K E++I+  L H N+V+
Sbjct: 11  VLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVK 70

Query: 245 LHD--SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
                S +      +I E    G L   L +        +  + +Q+  G+ Y+H     
Sbjct: 71  YKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLA-QLLLFAQQICEGMAYLHSQHYI 129

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           H  L   ++L+ +   R + + DFGL++ +
Sbjct: 130 HRDLAARNVLLDND--RLVKIGDFGLAKAV 157

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 41.0 bits (96), Expect = 0.003
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE+   +P   + D++S GVL Y LL+   PF G++  E       +  R++ L   ++
Sbjct: 213  APEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKT--LAGRYDPLPPSIS 270

Query: 1204 QEATRFLMLIFKRAPGKRPT 1223
             E    +  +    P +RP+
Sbjct: 271  PEMQEIVTALLSSDPKRRPS 290

Length = 496

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 40.3 bits (95), Expect = 0.004
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 18/92 (19%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE------Y 1197
            APEV+  +P   + D+WS G+ A  L  G  P+           +  ++  F+       
Sbjct: 165  APEVINGKPYDYKADIWSLGITAIELAEGKPPYS---------ELPPMKALFKIATNGPP 215

Query: 1198 LFKE---LTQEATRFLMLIFKRAPGKRPTVEE 1226
              +     + E   FL    ++ P KRPT E+
Sbjct: 216  GLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQ 247

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 40.3 bits (95), Expect = 0.004
 Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 10/120 (8%)

Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY---SHDTLHQVNTEFDNLRSLRHE 653
            YQ    I RG F VV K      T + VA K         + L  +  E D L++L+H 
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNL-ETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHP 59

Query: 654 RIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE--HYL 711
            I   + + + S +   I   ++E  +   +   +     + E  VA  + Q  +   YL
Sbjct: 60  NIVKYIGSIETSDS-LYI---ILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYL 115

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 40.2 bits (95), Expect = 0.004
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 473 RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
               + E  I  +  QL   L Y+H   I H  + P ++ +   G   + L DFG+S+
Sbjct: 96  EGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG--LVKLGDFGISK 151

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 40.4 bits (95), Expect = 0.004
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT-SFG 536
           +E  IA+  R+ L GL Y+H     H  +   ++L+   G   + L DFG+S ++T +  
Sbjct: 99  SELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDG--DVKLADFGVSAQLTATIA 156

Query: 537 KLN 539
           K  
Sbjct: 157 KRK 159

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 40.6 bits (96), Expect = 0.004
 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 23/112 (20%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE- 1014
            L+GLQYLH  G+ H +I+  N+++       +KL D G          L  P    N   
Sbjct: 110  LEGLQYLHSNGILHRDIKGSNILIN--NDGVLKLADFG----------LARPYTKRNSAD 157

Query: 1015 ---------FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
                     +  PE+L     + P+ D+WS G +   L  G   F+G +E E
Sbjct: 158  YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE 209

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 40.6 bits (95), Expect = 0.004
 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
            ++  L YLH   + + +++ +N+++   +   +K+ D G C + ++   T+     TP  
Sbjct: 104  IVSALGYLHSCDVVYRDLKLENLMLD--KDGHIKITDFGLCKEGISDGATMKTFCGTP-- 159

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052
            E+ APEVL +       D W  GV+ Y ++ G  PF  Q
Sbjct: 160  EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 40.4 bits (94), Expect = 0.004
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 8/98 (8%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT-KLGTLIHP 1007
            AY     L GL YLH +G  H +I+  N+++    +  VKL D G   ++T  +      
Sbjct: 109  AYVCRETLQGLAYLHSKGKMHRDIKGANILLTD--NGDVKLADFGVAAKITATIAKRKSF 166

Query: 1008 INTPNPEFAAPEVLAEEPI--FPQ-TDVWSAGVLAYVL 1042
            I T  P + APEV A E    + Q  D+W+ G+ A  L
Sbjct: 167  IGT--PYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 40.4 bits (94), Expect = 0.004
 Identities = 33/156 (21%), Positives = 68/156 (43%), Gaps = 18/156 (11%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--- 241
           ++F   LG+G  G V  A  + +   YA K++       K +   + D+   +  +    
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILK------KDVVIQDDDVECTMVEKRVLA 55

Query: 242 -------LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
                  L +LH  ++T D    + E   GG+L++ + +   + E     Y  ++  GL 
Sbjct: 56  LSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLF 115

Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           ++H   I +  L   ++++   G  H+ + DFG+ +
Sbjct: 116 FLHSKGIIYRDLKLDNVMLDSEG--HIKIADFGMCK 149

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 40.4 bits (94), Expect = 0.004
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 4/106 (3%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
             L++LH  G+ + +I+ +N+++ S  +  V L D G ++   +             E+ A
Sbjct: 117  ALEHLHKLGIIYRDIKLENILLDS--NGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMA 174

Query: 1018 PEVLA--EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            P+++   +       D WS GVL Y LL+GASPF    E  ++  +
Sbjct: 175  PDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEI 220

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 40.5 bits (95), Expect = 0.004
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 22/102 (21%)

Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK---------LGTLIHPIN 1009
            L +LH  G+ + +I+ +N+++ S     V L D G ++              GT+     
Sbjct: 118  LDHLHQLGIIYRDIKLENILLDS--EGHVVLTDFGLSKEFLAEEEERAYSFCGTI----- 170

Query: 1010 TPNPEFAAPEVLAEEPI--FPQTDVWSAGVLAYVLLSGASPF 1049
                E+ APEV+           D WS GVL + LL+GASPF
Sbjct: 171  ----EYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPF 208

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 40.8 bits (95), Expect = 0.004
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%)

Query: 480 YDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
           +++  ++ QLL GL+Y HR  + H  L P +LL+   G   L L DFGL+R
Sbjct: 104 HNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG--ELKLADFGLAR 152

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 40.9 bits (96), Expect = 0.004
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            + TPN  + APEVL         D WS GV+ Y +L G  PF   +  ET+  V
Sbjct: 205  VGTPN--YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKV 256

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 40.8 bits (96), Expect = 0.004
 Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGG+++  L ++  +TE +   YI + +  +D +H+L   H  + P +LL+   G  H+ 
Sbjct: 84  PGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKG--HIK 141

Query: 523 LTDFGLS 529
           L+DFGL 
Sbjct: 142 LSDFGLC 148

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 40.6 bits (95), Expect = 0.004
 Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 14/88 (15%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINT--PN 1012
             L GL YLH     H +I+  N+++       VKL D G         +L+ P N+    
Sbjct: 124  ALQGLAYLHSHERIHRDIKAGNILLTE--PGTVKLADFGS-------ASLVSPANSFVGT 174

Query: 1013 PEFAAPEV-LA--EEPIFPQTDVWSAGV 1037
            P + APEV LA  E     + DVWS G+
Sbjct: 175  PYWMAPEVILAMDEGQYDGKVDVWSLGI 202

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 40.3 bits (94), Expect = 0.004
 Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 13/101 (12%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN-----TPN 1012
            G+Q++H + + H +I+  N+ +   ++ +VKL D G  +       L  P          
Sbjct: 112  GVQHIHEKRVLHRDIKSKNIFLT--QNGKVKLGDFGSAR------LLTSPGAYACTYVGT 163

Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
            P +  PE+    P   ++D+WS G + Y L +   PF+  S
Sbjct: 164  PYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS 204

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 40.5 bits (95), Expect = 0.004
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 14/102 (13%)

Query: 957  DGLQYLHWRGLCHLNIEPDNVVMASVRSVQV------KLIDLGCTQRVTKLGTLIHPINT 1010
             G+ YL  + L H ++   NV++ + + V++      KL+D+   +   + G +  PI  
Sbjct: 120  KGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKV--PI-- 175

Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
               ++ A E +       ++DVWS GV  + L++ GA P+ G
Sbjct: 176  ---KWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEG 214

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 41.0 bits (96), Expect = 0.004
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 21/115 (18%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV----------TKLGTL 1004
            VL  + ++H + + H +I+  N+++ S  +  VKL D G ++            T  GT 
Sbjct: 152  VLLAVHHVHSKHMIHRDIKSANILLCS--NGLVKLGDFGFSKMYAATVSDDVGRTFCGT- 208

Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
                    P + APE+   +P   + D++S GVL Y LL+   PF G++  E   
Sbjct: 209  --------PYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMH 255

Length = 496

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 40.5 bits (95), Expect = 0.004
 Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 18/156 (11%)

Query: 190 ELGRGVTGIVY---HAVER-SSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVR 244
           +LG G  G V    +     ++G   A K +      Q++S F+ E++I+  L H N+V+
Sbjct: 11  QLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVK 70

Query: 245 LHD-SYET-KDSFTIISELAGGGELLHSLTRQSYYTEYDIAH-----YIRQLLSGLDYMH 297
                 +    S  +I E    G L   L R        I       +  Q+  G+DY+ 
Sbjct: 71  YKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHR----DQINLKRLLLFSSQICKGMDYLG 126

Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
                H  L   ++LV       + ++DFGL++ + 
Sbjct: 127 SQRYIHRDLAARNILVESE--DLVKISDFGLAKVLP 160

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	1310
KOG0603|consensus	612		100.0
KOG0615|consensus	475		100.0
KOG0033|consensus	355		100.0
KOG0032|consensus	382		100.0
KOG0615|consensus	475		100.0
KOG0605|consensus	550		100.0
KOG0598|consensus	357		100.0
KOG0583|consensus	370		100.0
KOG0595|consensus	429		100.0
KOG0575|consensus	592		100.0
KOG0575|consensus	592		100.0
KOG0599|consensus	411		100.0
KOG0659|consensus	318		100.0
KOG0604|consensus	400		100.0
KOG0600|consensus	560		100.0
KOG0616|consensus	355		100.0
KOG0607|consensus	463		100.0
KOG0032|consensus	382		100.0
KOG0593|consensus	396		100.0
KOG0663|consensus	419		100.0
KOG0595|consensus	429		100.0
KOG0593|consensus	396		100.0
KOG0588|consensus	786		100.0
KOG0661|consensus	538		100.0
KOG0583|consensus	370		100.0
KOG0605|consensus	550		100.0
KOG0592|consensus	604		100.0
KOG0694|consensus	694		100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG0597|consensus	808		100.0
KOG0598|consensus	357		100.0
KOG0599|consensus	411		100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
KOG0581|consensus	364		99.98
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.98
KOG0616|consensus	355		99.98
KOG0033|consensus	355		99.98
KOG0590|consensus	601		99.98
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.98
KOG0581|consensus	364		99.98
KOG0588|consensus	786		99.98
KOG0611|consensus	668		99.97
KOG0594|consensus	323		99.97
KOG0592|consensus	604		99.97
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.97
KOG0585|consensus	576		99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.97
KOG0585|consensus	576		99.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.97
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.97
KOG0694|consensus	694		99.97
KOG0580|consensus	281		99.97
KOG0660|consensus	359		99.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.97
KOG0578|consensus	550		99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.97
KOG0660|consensus	359		99.97
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.97
KOG4717|consensus	864		99.97
KOG4236|consensus	888		99.97
PHA03212	391	serine/threonine kinase US3; Provisional	99.97
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.97
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.97
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.97
PTZ00036	440	glycogen synthase kinase; Provisional	99.97
KOG0580|consensus	281		99.97
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.97
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.97
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.97
PTZ00284	467	protein kinase; Provisional	99.97
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
KOG0600|consensus	560		99.97
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.97
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.97
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.97
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.96
KOG0201|consensus	467		99.96
PTZ00267	478	NIMA-related protein kinase; Provisional	99.96
KOG0198|consensus	313		99.96
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.96
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.96
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.96
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.96
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.96
KOG0604|consensus	400		99.96
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.96
KOG0661|consensus	538		99.96
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.96
KOG0607|consensus	463		99.96
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.96
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.96
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.96
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.96
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.96
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.96
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.96
KOG0658|consensus	364		99.96
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.96
PHA03207	392	serine/threonine kinase US3; Provisional	99.96
KOG0667|consensus	586		99.96
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.96
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.96
KOG0597|consensus	808		99.96
KOG0591|consensus	375		99.96
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.96
KOG0658|consensus	364		99.96
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.96
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.96
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.96
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.96
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.96
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.96
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.96
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.96
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.96
KOG0586|consensus	596		99.96
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.96
KOG0662|consensus	292		99.96
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.96
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.96
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.96
KOG0611|consensus	668		99.96
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.96
KOG0594|consensus	323		99.96
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.96
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.96
KOG4717|consensus	864		99.96
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.96
PHA03211	461	serine/threonine kinase US3; Provisional	99.96
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.96
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.96
KOG0610|consensus	459		99.96
KOG0690|consensus	516		99.96
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.96
PTZ00283	496	serine/threonine protein kinase; Provisional	99.96
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.96
KOG0586|consensus	596		99.96
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.96
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.96
PHA03209	357	serine/threonine kinase US3; Provisional	99.96
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.96
PHA03210	501	serine/threonine kinase US3; Provisional	99.96
KOG0663|consensus	419		99.96
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.96
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.95
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.95
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.95
KOG0578|consensus	550		99.95
KOG0591|consensus	375		99.95
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.95
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.95
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.95
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.95
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.95
KOG0198|consensus	313		99.95
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.95
KOG0659|consensus	318		99.95
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.95
KOG0612|consensus	1317		99.95
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.95
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.95
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.95
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.95
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.95
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.95
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.95
KOG0582|consensus	516		99.95
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.95
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.95
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.95
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.95
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.95
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.95
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.95
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.95
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.95
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.95
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.95
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.95
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.95
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.95
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.95
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.95
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.95
KOG0610|consensus	459		99.95
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.95
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.95
KOG0582|consensus	516		99.95
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.95
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.95
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.95
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.95
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.95
KOG0579|consensus	1187		99.95
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.95
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.95
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.95
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.95
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.95
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.95
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.95
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.95
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.94
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.94
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.94
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.94
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.94
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.94
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.94
KOG4236|consensus	888		99.94
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.94
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.94
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.94
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.94
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.94
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.94
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.94
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.94
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.94
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.94
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.94
KOG1290|consensus	590		99.94
PLN00009	294	cyclin-dependent kinase A; Provisional	99.94
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.94
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.94
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.94
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.94
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.94
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.94
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.94
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.94
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.94
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.94
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.94
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.94
PHA03212	391	serine/threonine kinase US3; Provisional	99.94
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.94
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.94
KOG1035|consensus	1351		99.94
KOG0690|consensus	516		99.94
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.94
PTZ00036	440	glycogen synthase kinase; Provisional	99.94
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.94
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.94
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.94
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.94
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.94
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.94
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.94
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.94
KOG0612|consensus	1317		99.94
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.94
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.94
KOG0192|consensus	362		99.94
KOG0666|consensus	438		99.94
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.94
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.94
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.94
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.94
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.94
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.94
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.94
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.94
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.94
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.94
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.94
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.94
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.94
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.94
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.94
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.94
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.94
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.94
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.94
PTZ00267	478	NIMA-related protein kinase; Provisional	99.94
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.94
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.94
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.94
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.94
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.94
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.94
KOG0579|consensus	1187		99.94
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.93
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.93
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.93
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.93
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.93
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.93
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.93
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.93
KOG4645|consensus	1509		99.93
KOG0696|consensus	683		99.93
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.93
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.93
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.93
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.93
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.93
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.93
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.93
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.93
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.93
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.93
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.93
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.93
KOG0608|consensus	1034		99.93
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.93
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.93
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.93
KOG4250|consensus	732		99.93
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.93
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.93
KOG0577|consensus	948		99.93
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.93
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.93
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.93
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.93
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.93
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.93
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.93
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.93
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.93
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.93
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.93
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.93
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.93
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.93
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.93
KOG1187|consensus	361		99.93
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.93
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.93
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.93
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.93
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.93
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.93
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.93
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.93
KOG0201|consensus	467		99.93
KOG0197|consensus	468		99.93
KOG0589|consensus	426		99.93
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.93
KOG0614|consensus	732		99.93
PHA03209	357	serine/threonine kinase US3; Provisional	99.93
KOG0614|consensus	732		99.93
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.93
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.93
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.93
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.92
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.92
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.92
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.92
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.92
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.92
KOG0667|consensus	586		99.92
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.92
PTZ00283	496	serine/threonine protein kinase; Provisional	99.92
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.92
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.92
PTZ00284	467	protein kinase; Provisional	99.92
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.92
KOG0608|consensus	1034		99.92
KOG0577|consensus	948		99.92
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.92
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.92
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.92
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.92
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.92
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.92
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.92
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.92
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.92
PHA03207	392	serine/threonine kinase US3; Provisional	99.92
KOG0669|consensus	376		99.92
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.92
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.92
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.92
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.92
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.92
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.92
PHA02988	283	hypothetical protein; Provisional	99.92
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.92
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.92
KOG4279|consensus	1226		99.92
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.92
KOG4279|consensus	1226		99.92
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.92
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.92
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.92
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.92
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.92
KOG0574|consensus	502		99.92
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.92
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.92
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.92
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.92
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.92
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.92
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.92
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.92
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.92
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.92
KOG0986|consensus	591		99.92
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.92
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.92
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.92
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.92
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.92
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.92
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.92
KOG1989|consensus	738		99.92
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.92
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.92
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.92
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.92
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.92
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.92
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.91
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.91
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.91
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.91
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.91
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.91
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.91
KOG0986|consensus	591		99.91
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.91
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.91
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.91
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.91
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.91
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.91
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.91
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.91
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.91
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.91
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.91
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.91
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.91
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.91
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.91
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.91
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.91
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.91
PHA03211	461	serine/threonine kinase US3; Provisional	99.91
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.91
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.91
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.91
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.91
KOG0695|consensus	593		99.91
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.91
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.91
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.91
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.91
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.91
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.91
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.91
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.91
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.91
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.91
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.91
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.91
KOG0192|consensus	362		99.91
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.91
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.91
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.91
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.91
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.91
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.91
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.91
KOG0576|consensus	829		99.91
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.91
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.91
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.91
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.91
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.91
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.91
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.91
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.91
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.91
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.91
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.91
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.91
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.91
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.91
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.91
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.9
KOG1989|consensus	738		99.9
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.9
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.9
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.9
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.9
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.9
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.9
KOG0596|consensus	677		99.9
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.9
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.9
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.9

>KOG0603|consensus

Probab=100.00  E-value=2.9e-49  Score=467.14  Aligned_cols=553  Identities=23%  Similarity=0.340  Sum_probs=385.5

Q ss_pred             eecccCceEEEEEE---EcCCCcEEEEEEEecCCcch--HHHHHHHHHHHHhcC-CCCcceEEEEEEeCCeEEEEEecCC
Q psy5279         190 ELGRGVTGIVYHAV---ERSSGRNYAAKVMTGKGNQY--KSLFKNELDIMNQLC-HRNLVRLHDSYETKDSFTIISELAG  263 (1310)
Q Consensus       190 ~LG~GsFG~Vyka~---~k~Tg~~vAIKiI~~~~~~~--~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~~lyLVmEy~~  263 (1310)
                      ++|+|+||+|+++.   -.+.|..||+|+..+.....  +.....|..++...+ ||.+|+++..|+++..+|++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            47999999998654   34678899999987654322  223456888899987 9999999999999999999999999


Q ss_pred             CCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCCCccc
Q psy5279         264 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEY  343 (1310)
Q Consensus       264 GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~~~~~  343 (1310)
                      ||+|+.++.....+++.+.+.+...++.|++++|+.+|+|||+|++||+++.+|  ++|+.|||++|........   ||
T Consensus        81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~G--hi~~tdfglske~v~~~~~---cg  155 (612)
T KOG0603|consen   81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEG--HIKLTDFGLSKEAVKEKIA---CG  155 (612)
T ss_pred             cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccC--ccccCCchhhhHhHhhhhc---cc
Confidence            999999999988999999999999999999999999999999999999998776  8999999999987654433   88


Q ss_pred             chHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCCCCCCCCC
Q psy5279         344 DVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEP  423 (1310)
Q Consensus       344 t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~~~tp~~  423 (1310)
                      |..|++     |++.                   +-...+.|||+.             .+++.+.+++..||+..+...
T Consensus       156 t~eymA-----pEI~-------------------~gh~~a~D~ws~-------------gvl~felltg~~pf~~~~~~~  198 (612)
T KOG0603|consen  156 TYEYRA-----PEII-------------------NGHLSAADWWSF-------------GVLAFELLTGTLPFGGDTMKR  198 (612)
T ss_pred             chhhhh-----hHhh-------------------hccCCcccchhh-------------hhhHHHHhhCCCCCchHHHHH
Confidence            888775     4432                   113346898776             566666777777776633222


Q ss_pred             CCc-ceecccccccccccccccCCCCCCCcccc-cCCCCCCCCc--hhhHHHHhccCCCHHHHHHHHHHHHHHhhhhccC
Q psy5279         424 TPD-KVLVSRDLRDVKTWEDNVPNRGPDVKTWE-DNVPNRGPGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL  499 (1310)
Q Consensus       424 ~p~-~i~v~~~~rD~~~~~~~~~~~~~~~i~~~-d~v~e~~~~~--el~~~~~~~~~~~e~~~~~~~~qi~~~~~y~H~~  499 (1310)
                      ++. +..++          .-+...+++++... --+++..-|.  +..+-|+++..|.--+-        .++.+--  
T Consensus       199 Il~~~~~~p----------~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~--------~~l~~r~--  258 (612)
T KOG0603|consen  199 ILKAELEMP----------RELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDW--------NELEARS--  258 (612)
T ss_pred             HhhhccCCc----------hhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeH--------hhHhhcC--
Confidence            222 11111          12223333333333 2233333333  45566666554321100        0111100  


Q ss_pred             CceecCCCCCCeEeccCCCCcEEEecccccchhccccccCCCCCCCCce-eEeechhhhhHHHHhhcCCccccCCCCCCC
Q psy5279         500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYGNGQY-KVAVTPAMKHLQAITEAGHTPTLAQDPPPL  578 (1310)
Q Consensus       500 ~i~hrDlkp~Nil~~~~~~~~ikl~DfG~a~~~~~~~~~~~~~~~~~~~-~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  578 (1310)
                        +|-=.||.=.                           ...-+..+.+ -..-||++.++----++.|++  ..+++-.
T Consensus       259 --~~~~fkp~~~---------------------------~e~~~~~fd~eft~~~P~dsp~~~~~~s~~~i--f~g~sfv  307 (612)
T KOG0603|consen  259 --RPPPFKPGSI---------------------------TERDVAQFDPEFTSQVPADSPLLSASGSDHTI--FSGPSFV  307 (612)
T ss_pred             --CCCCCCCccc---------------------------chhhhhhcCchhccCCcccCCCCCCCccccch--hcCCCcc
Confidence              0111122110                           0011111112 123456665543333333332  2333332


Q ss_pred             CCccccCCCccccCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhh-hhhhhchhhHHH
Q psy5279         579 NYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFD-NLRSLRHERIAS  657 (1310)
Q Consensus       579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  657 (1310)
                      .-++-..   =.+-|.++.|.|..+|-.|-||+|..|.-++ |..-.+.|+++-+.+   +.-.|-. .++--.|++|.+
T Consensus       308 a~~il~~---~~~~~~~~~y~~~~~~~~gs~s~~~~~~~~~-t~~~~~vkii~~~~~---~~~~e~~~~~~~~~h~niv~  380 (612)
T KOG0603|consen  308 APGVLED---AVTAPFTESYEFREELGEGSFSAVKYCESSP-TDQEPAVKIISKRAD---DNQDEIPISLLVRDHPNIVK  380 (612)
T ss_pred             ChHHhhc---cccCCcchhhccccccCCCCccceeeeeccc-cccchhheecccccc---ccccccchhhhhcCCCccee
Confidence            2222211   2345679999999999999999999999998 999999999988722   2223332 345557999999


Q ss_pred             HHHhcCCCCcccchhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhh
Q psy5279         658 LLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQ  737 (1310)
Q Consensus       658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (1310)
                      ++.-|--.    -.+-+|||+++|.++|..+-+-.+                                            
T Consensus       381 ~~~v~~~~----~~~~~v~e~l~g~ell~ri~~~~~--------------------------------------------  412 (612)
T KOG0603|consen  381 SHDVYEDG----KEIYLVMELLDGGELLRRIRSKPE--------------------------------------------  412 (612)
T ss_pred             ecceecCC----ceeeeeehhccccHHHHHHHhcch--------------------------------------------
Confidence            99999887    567799999999987743211000                                            


Q ss_pred             hcccccccccccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCccccccccccc
Q psy5279         738 SANTANLRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLD  817 (1310)
Q Consensus       738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  817 (1310)
                                                                                                      
T Consensus       413 --------------------------------------------------------------------------------  412 (612)
T KOG0603|consen  413 --------------------------------------------------------------------------------  412 (612)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCCcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCcee
Q psy5279         818 TSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFR  897 (1310)
Q Consensus       818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffr  897 (1310)
                                                                                                      
T Consensus       413 --------------------------------------------------------------------------------  412 (612)
T KOG0603|consen  413 --------------------------------------------------------------------------------  412 (612)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcE
Q psy5279         898 EKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNV  977 (1310)
Q Consensus       898 E~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNI  977 (1310)
                                                                   .+ ..+..+++||+.|++|||++|||||||||+||
T Consensus       413 ---------------------------------------------~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NI  446 (612)
T KOG0603|consen  413 ---------------------------------------------FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNI  446 (612)
T ss_pred             ---------------------------------------------hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhhe
Confidence                                                         00 12456788999999999999999999999999


Q ss_pred             EEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279         978 VMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus       978 Ll~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      |++ +..++++|+|||.++.....  ..+      |                                            
T Consensus       447 L~~-~~~g~lrltyFG~a~~~~~~--~~t------p--------------------------------------------  473 (612)
T KOG0603|consen  447 LLD-GSAGHLRLTYFGFWSELERS--CDT------P--------------------------------------------  473 (612)
T ss_pred             eec-CCCCcEEEEEechhhhCchh--hcc------c--------------------------------------------
Confidence            996 23567999999987643211  000      0                                            


Q ss_pred             HhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcccCCCccc
Q psy5279        1058 RQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSAL 1137 (1310)
Q Consensus      1058 ~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~l 1137 (1310)
                                                                                                     .
T Consensus       474 -------------------------------------------------------------------------------~  474 (612)
T KOG0603|consen  474 -------------------------------------------------------------------------------A  474 (612)
T ss_pred             -------------------------------------------------------------------------------c
Confidence                                                                                           0


Q ss_pred             ccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChh-hhhhcccccccccccchhccCHHHHHHHHHhhhc
Q psy5279        1138 FKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKR 1216 (1310)
Q Consensus      1138 f~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~-e~~~~I~~~~~~f~~~~~~iS~eAkdfI~~lL~~ 1216 (1310)
                      +...+.||||++..+|+++|||||+||++|+||+|.+||...... ++...|..++++     .+||.+|||||++||+.
T Consensus       475 ~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s-----~~vS~~AKdLl~~LL~~  549 (612)
T KOG0603|consen  475 LTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS-----ECVSDEAKDLLQQLLQV  549 (612)
T ss_pred             hhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc-----cccCHHHHHHHHHhccC
Confidence            122456888888889999999999999999999999999877655 777878777654     57999999999999999


Q ss_pred             CCCCCCCHHHhhcCCcc
Q psy5279        1217 APGKRPTVEECHENRWL 1233 (1310)
Q Consensus      1217 dP~kRpTa~e~L~HpWl 1233 (1310)
                      ||.+|||+.|++.|||+
T Consensus       550 dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  550 DPALRLGADEIGAHPWF  566 (612)
T ss_pred             ChhhCcChhhhccCcch
Confidence            99999999999999999

>KOG0615|consensus

Probab=100.00  E-value=4.8e-45  Score=412.93  Aligned_cols=285  Identities=21%  Similarity=0.329  Sum_probs=218.9

Q ss_pred             ccccccccCCccccccccceeceeEEeeecCccc-ccchhcccccceecccCccCCCeeeeceecccCceEEEEEEEcCC
Q psy5279         129 PITDAYDFGDELGRGVTGTISHSVTVHVEDNENE-YSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSS  207 (1310)
Q Consensus       129 ~~~~~~~~g~~iG~G~~g~is~~~~i~v~~~~~~-~s~~~~~~~~~~~~~~~~~~d~Y~i~~~LG~GsFG~Vyka~~k~T  207 (1310)
                      +.+++..+.+.+|+|..-.+.+.+.+++..+... +.+....+. ......+.+.+.|.+.+.||+|+||.|.+|.++.|
T Consensus       118 S~nGT~VN~e~i~k~~~r~lkN~dei~is~p~~~~~v~~~~s~d-~~~~~pks~~d~yii~~~LGsGafg~Vkla~e~~t  196 (475)
T KOG0615|consen  118 SRNGTFVNDEMIGKGLSRILKNGDEISISIPALKIFVFEDLSRD-SSKVPPKSFNDYYIISKTLGSGAFGLVKLAYEKKT  196 (475)
T ss_pred             ccCcccccHhHhhccccccccCCCEEEeccchhheeeeecccch-hccCccchhcceeEeeeeecCCceeEEEEEEEccc
Confidence            3445566677778877766777776665433222 122221111 12223346889999999999999999999999999


Q ss_pred             CcEEEEEEEecCCcc-------hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCCchHHHhhhcCCCCHH
Q psy5279         208 GRNYAAKVMTGKGNQ-------YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEY  280 (1310)
Q Consensus       208 g~~vAIKiI~~~~~~-------~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GGeL~~~l~~~~~lsE~  280 (1310)
                      |+.||||+++++...       ....+.+|++||++|+|||||+++++|+.++..|||||||+||+|++++...+.+.|.
T Consensus       197 gk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed  276 (475)
T KOG0615|consen  197 GKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLRED  276 (475)
T ss_pred             CcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccc
Confidence            999999999865321       1123579999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC-CCCeEEEEeeccceeecCCCCCCCcccchHHHhhhcC------
Q psy5279         281 DIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP-GGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALR------  353 (1310)
Q Consensus       281 ~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~-~~~~VKLsDFGLAr~i~~~~~l~~~~~t~~yv~~~~r------  353 (1310)
                      ..+.+++|+|.||.|||++||+|||||||||||..+ ....+||+||||||.....+.++++||||.|+++...      
T Consensus       277 ~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~  356 (475)
T KOG0615|consen  277 LGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVE  356 (475)
T ss_pred             hhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCee
Confidence            999999999999999999999999999999999866 4568999999999999999999999999999986321      


Q ss_pred             -------------------CCccccCCCCCCCC--------CCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccC
Q psy5279         354 -------------------HPWLNFADRKPTED--------TPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYT  406 (1310)
Q Consensus       354 -------------------~P~l~~~~~~~~~~--------~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~  406 (1310)
                                         +.+++|++......        .-.+.+.++..+...+.|++...++=+..+|+++++.|.
T Consensus       357 ~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  357 YYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             cccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence                               12334443332110        011222333344455566666667777899999999999


Q ss_pred             CCcceecC
Q psy5279         407 HPSRMIYP  414 (1310)
Q Consensus       407 hpw~~~~~  414 (1310)
                      |||+...+
T Consensus       437 hpW~~~~~  444 (475)
T KOG0615|consen  437 HPWFKDAP  444 (475)
T ss_pred             Chhhhccc
Confidence            99985444

>KOG0033|consensus

Probab=100.00  E-value=9.9e-44  Score=380.44  Aligned_cols=263  Identities=27%  Similarity=0.501  Sum_probs=225.0

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecc---cCcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccc
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE---YSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASN  670 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  670 (1310)
                      -+|.|+.-.+|-.|-||||+.|..+- |+..+|||++.   ++....+.+..|-..-+.|.||+|..|++.|..-    .
T Consensus         9 f~d~y~l~e~igkG~FSvVrRc~~~~-tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~----~   83 (355)
T KOG0033|consen    9 FSDNYDVKEELGKGAFSVVRRCVHKT-TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE----S   83 (355)
T ss_pred             cchhhhHHHHHccCchHHHHHHHhcc-chHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhccc----c
Confidence            36789999999999999999999887 99999999985   4555777888999999999999999999999877    6


Q ss_pred             hhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccccccc
Q psy5279         671 IAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTW  750 (1310)
Q Consensus       671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  750 (1310)
                      ..-||.|++.|+|+.--+-.|.-|||..+                                                   
T Consensus        84 ~~ylvFe~m~G~dl~~eIV~R~~ySEa~a---------------------------------------------------  112 (355)
T KOG0033|consen   84 FHYLVFDLVTGGELFEDIVAREFYSEADA---------------------------------------------------  112 (355)
T ss_pred             eeEEEEecccchHHHHHHHHHHHHHHHHH---------------------------------------------------
Confidence            77789999999999877777766665433                                                   


Q ss_pred             cCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcch
Q psy5279         751 EDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPV  830 (1310)
Q Consensus       751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  830 (1310)
                                                                                                      
T Consensus       113 --------------------------------------------------------------------------------  112 (355)
T KOG0033|consen  113 --------------------------------------------------------------------------------  112 (355)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCE
Q psy5279         831 IRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDK  910 (1310)
Q Consensus       831 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~  910 (1310)
                                                                                                      
T Consensus       113 --------------------------------------------------------------------------------  112 (355)
T KOG0033|consen  113 --------------------------------------------------------------------------------  112 (355)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEE
Q psy5279         911 LEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKL  989 (1310)
Q Consensus       911 l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL  989 (1310)
                                                            ..|++||++||.|||.+||||||+||+|+|+.++. ...|||
T Consensus       113 --------------------------------------SH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL  154 (355)
T KOG0033|consen  113 --------------------------------------SHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKL  154 (355)
T ss_pred             --------------------------------------HHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceee
Confidence                                                  33467999999999999999999999999998754 457999


Q ss_pred             EeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccccccc
Q psy5279         990 IDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069 (1310)
Q Consensus       990 ~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~ 1069 (1310)
                      +|||+|..+. .+. ......|||.|||||++                                                
T Consensus       155 ~~FGvAi~l~-~g~-~~~G~~GtP~fmaPEvv------------------------------------------------  184 (355)
T KOG0033|consen  155 ADFGLAIEVN-DGE-AWHGFAGTPGYLSPEVL------------------------------------------------  184 (355)
T ss_pred             cccceEEEeC-Ccc-ccccccCCCcccCHHHh------------------------------------------------
Confidence            9999998876 222 22233566666666654                                                


Q ss_pred             ccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcccCCCcccccccccchhhcc
Q psy5279        1070 YLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLA 1149 (1310)
Q Consensus      1070 ~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~ 1149 (1310)
                                                                                                     .
T Consensus       185 -------------------------------------------------------------------------------r  185 (355)
T KOG0033|consen  185 -------------------------------------------------------------------------------K  185 (355)
T ss_pred             -------------------------------------------------------------------------------h
Confidence                                                                                           3


Q ss_pred             cCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccc-cchhccCHHHHHHHHHhhhcCCCCCCCHHHhh
Q psy5279        1150 EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLIFKRAPGKRPTVEECH 1228 (1310)
Q Consensus      1150 ~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~-~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L 1228 (1310)
                      ..+|+.++||||+|||+|+||+|++||++++...+++.|..+.|+++ ..|+.||++|||||+|||..||.+|+||.|+|
T Consensus       186 kdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL  265 (355)
T KOG0033|consen  186 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEAL  265 (355)
T ss_pred             cCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHh
Confidence            45688889999999999999999999999999999999999999997 48999999999999999999999999999999


Q ss_pred             cCCccCCchhH
Q psy5279        1229 ENRWLVPSEYM 1239 (1310)
Q Consensus      1229 ~HpWl~~~~~~ 1239 (1310)
                      +|||+-.-+.+
T Consensus       266 ~HpWi~~r~~~  276 (355)
T KOG0033|consen  266 KHPWICNRERV  276 (355)
T ss_pred             CCchhcchHHH
Confidence            99999766654

>KOG0032|consensus

Probab=100.00  E-value=4.7e-42  Score=400.43  Aligned_cols=291  Identities=30%  Similarity=0.492  Sum_probs=249.6

Q ss_pred             ccCCCccccCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcc----hhhhhhHHhhhhhhhc-hhhHHH
Q psy5279         583 EDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD----TLHQVNTEFDNLRSLR-HERIAS  657 (1310)
Q Consensus       583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~  657 (1310)
                      ......+..+.-.+.|+|..+|-||.||+|.+|.++. |+..+|+|.+.=.--    +...|..|...|+.|. |+||..
T Consensus        22 ~~~~~~~~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~-tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~  100 (382)
T KOG0032|consen   22 GLSILPPFSEDIKEKYELGRELGRGQFGVVYLCREKS-TGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQ  100 (382)
T ss_pred             cccccccccccccccEEehhhhCCCCceEEEEEEecC-CCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEE
Confidence            3333444566678899999999999999999999999 799999999975443    4578999999999999 999999


Q ss_pred             HHHhcCCCCcccchhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhh
Q psy5279         658 LLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQ  737 (1310)
Q Consensus       658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (1310)
                      |.++|..+    +...||||+|.|++++.++..++ |||.+++.++                                  
T Consensus       101 l~~~~e~~----~~~~lvmEL~~GGeLfd~i~~~~-~sE~da~~~~----------------------------------  141 (382)
T KOG0032|consen  101 LKDAFEDP----DSVYLVMELCEGGELFDRIVKKH-YSERDAAGII----------------------------------  141 (382)
T ss_pred             EEEEEEcC----CeEEEEEEecCCchHHHHHHHcc-CCHHHHHHHH----------------------------------
Confidence            99999988    46789999999999999998885 8887766553                                  


Q ss_pred             hcccccccccccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCccccccccccc
Q psy5279         738 SANTANLRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLD  817 (1310)
Q Consensus       738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  817 (1310)
                                                                                                      
T Consensus       142 --------------------------------------------------------------------------------  141 (382)
T KOG0032|consen  142 --------------------------------------------------------------------------------  141 (382)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCCcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCcee
Q psy5279         818 TSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFR  897 (1310)
Q Consensus       818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffr  897 (1310)
                                                                                                      
T Consensus       142 --------------------------------------------------------------------------------  141 (382)
T KOG0032|consen  142 --------------------------------------------------------------------------------  141 (382)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcE
Q psy5279         898 EKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNV  977 (1310)
Q Consensus       898 E~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNI  977 (1310)
                                                                             +||+.|+.|||+.||+||||||||+
T Consensus       142 -------------------------------------------------------~~il~av~~lH~~gvvHrDlKpEN~  166 (382)
T KOG0032|consen  142 -------------------------------------------------------RQILEAVKYLHSLGVVHRDLKPENL  166 (382)
T ss_pred             -------------------------------------------------------HHHHHHHHHHHhCCceeccCCHHHe
Confidence                                                                   4899999999999999999999999


Q ss_pred             EEeecCC--CcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279         978 VMASVRS--VQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus       978 Ll~~~~~--~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      |+.....  ..+|++|||++..........  ..+|||.|+|||++.+                                
T Consensus       167 L~~~~~~~~~~ik~~DFGla~~~~~~~~~~--~~~Gtp~y~APEvl~~--------------------------------  212 (382)
T KOG0032|consen  167 LLASKDEGSGRIKLIDFGLAKFIKPGERLH--TIVGTPEYVAPEVLGG--------------------------------  212 (382)
T ss_pred             eeccccCCCCcEEEeeCCCceEccCCceEe--eecCCccccCchhhcC--------------------------------
Confidence            9987543  479999999998876522222  3356788888877532                                


Q ss_pred             HHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcccCCCc
Q psy5279        1056 ETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPS 1135 (1310)
Q Consensus      1056 e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips 1135 (1310)
                                                                                                      
T Consensus       213 --------------------------------------------------------------------------------  212 (382)
T KOG0032|consen  213 --------------------------------------------------------------------------------  212 (382)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccc-cchhccCHHHHHHHHHhh
Q psy5279        1136 ALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLIF 1214 (1310)
Q Consensus      1136 ~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~-~~~~~iS~eAkdfI~~lL 1214 (1310)
                                     .+|+.++||||+|||+|+||||.+||+++++.++..+|..+++.|+ +.|..+|..|+|||++||
T Consensus       213 ---------------~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll  277 (382)
T KOG0032|consen  213 ---------------RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLL  277 (382)
T ss_pred             ---------------CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhc
Confidence                           3488899999999999999999999999999999999999999995 689999999999999999


Q ss_pred             hcCCCCCCCHHHhhcCCccCCc--------hhHHHHHHHHHHhhhhhhHhH
Q psy5279        1215 KRAPGKRPTVEECHENRWLVPS--------EYMIKKRERAVFLGNRLKEFS 1257 (1310)
Q Consensus      1215 ~~dP~kRpTa~e~L~HpWl~~~--------~~~~~~~~~~~~~~~~lk~~~ 1257 (1310)
                      ..||.+|+||+|+|+|||+...        +..+..+.+++..++++++++
T Consensus       278 ~~dp~~R~ta~~~L~HpWi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (382)
T KOG0032|consen  278 EFDPRKRLTAAQALQHPWIKSIGEATNIPLDISVLSRSKQFLSMSKLKKLA  328 (382)
T ss_pred             ccCcccCCCHHHHhcCccccCCcccccccccchhhhhHHHHHHHHHHHHHH
Confidence            9999999999999999999653        335788888888888888875

>KOG0615|consensus

Probab=100.00  E-value=2e-42  Score=391.64  Aligned_cols=163  Identities=24%  Similarity=0.476  Sum_probs=139.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeec-CCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~-~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .++++|++.||.|||++||+||||||||||+..+ .+..+||+|||+|+......-  +...||||.|.|||++.+.++.
T Consensus       279 K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sf--m~TlCGTpsYvAPEVl~~kg~~  356 (475)
T KOG0615|consen  279 KLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSF--MKTLCGTPSYVAPEVLASKGVE  356 (475)
T ss_pred             HHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcccccee--hhhhcCCccccChhheecCCee
Confidence            4568899999999999999999999999999875 457899999999998764333  3445678999999998754321


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccc
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~ 1107 (1310)
                                                                                                      
T Consensus       357 --------------------------------------------------------------------------------  356 (475)
T KOG0615|consen  357 --------------------------------------------------------------------------------  356 (475)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhh-hhh
Q psy5279        1108 KDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE-TRQ 1186 (1310)
Q Consensus      1108 ~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e-~~~ 1186 (1310)
                                                                  .|..+|||||+|||+|++|||.+||.++..+. ..+
T Consensus       357 --------------------------------------------~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~e  392 (475)
T KOG0615|consen  357 --------------------------------------------YYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKE  392 (475)
T ss_pred             --------------------------------------------cccchheeeeccceEEEEeccCCCcccccCCccHHH
Confidence                                                        02257999999999999999999998886665 778


Q ss_pred             ccccccccc-ccchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCCch
Q psy5279        1187 NVNFVRYRF-EYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237 (1310)
Q Consensus      1187 ~I~~~~~~f-~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~~~ 1237 (1310)
                      .|..++|.| |..|..||++|+|||.+||++||.+|||++|+|+||||...+
T Consensus       393 QI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  393 QILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             HHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            899999999 688999999999999999999999999999999999997655

>KOG0605|consensus

Probab=100.00  E-value=7.4e-39  Score=372.60  Aligned_cols=151  Identities=27%  Similarity=0.446  Sum_probs=140.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ---YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~---~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      .-.++|++++.||+|+||.||+|+.+.||..||+|++++....   ..+.++.|-.||...++|+||+|+..|++.+.+|
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY  217 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY  217 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence            4568899999999999999999999999999999999876543   3345778999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      |||||++||++...|.+.+.|+|..+++|+.+++.|++-||+.|+|||||||+|+||+..|  ||||+||||++.+
T Consensus       218 LiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~G--HiKLSDFGLs~gl  291 (550)
T KOG0605|consen  218 LIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKG--HIKLSDFGLSTGL  291 (550)
T ss_pred             EEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCC--CEeeccccccchh
Confidence            9999999999999999999999999999999999999999999999999999999999876  9999999999644

>KOG0598|consensus

Probab=100.00  E-value=2.4e-38  Score=356.62  Aligned_cols=256  Identities=22%  Similarity=0.374  Sum_probs=208.6

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .++|+++++||+|+||+||+++.++|++.||+|+++++..   +..+...+|..||..++||+||+|+..|++++.+|||
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            4789999999999999999999999999999999987643   3345678999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec-CCCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT-SFGK  337 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~-~~~~  337 (1310)
                      +||+.||+|+..+.+++.|+|..++.|+.+|+.||.|||++||||||||||||||+.+|  +|+|+||||+|... ....
T Consensus       104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~G--Hi~LtDFgL~k~~~~~~~~  181 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQG--HIKLTDFGLCKEDLKDGDA  181 (357)
T ss_pred             EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCC--cEEEeccccchhcccCCCc
Confidence            99999999999999999999999999999999999999999999999999999999876  99999999999654 4446


Q ss_pred             CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCCC
Q psy5279         338 LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGT  417 (1310)
Q Consensus       338 l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~  417 (1310)
                      ..++|||+.|++     |++....                 -|+.+.|||+.             .++...++++.||+.
T Consensus       182 t~tfcGT~eYmA-----PEil~~~-----------------gy~~~vDWWsL-------------GillYeML~G~pPF~  226 (357)
T KOG0598|consen  182 TRTFCGTPEYMA-----PEILLGK-----------------GYDKAVDWWSL-------------GILLYEMLTGKPPFY  226 (357)
T ss_pred             cccccCCccccC-----hHHHhcC-----------------CCCcccchHhH-------------HHHHHHHhhCCCCCc
Confidence            677999999986     5554222                 27778999888             777788888999988


Q ss_pred             CCCCCCCCcceecccccccccccccccCCCCCCCcccc-cCCCCCCCC--chhhHHHHhccCCCH
Q psy5279         418 QFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWE-DNVPNRGPG--GELLHSLTRQSYYTE  479 (1310)
Q Consensus       418 ~~tp~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~~~-d~v~e~~~~--~el~~~~~~~~~~~e  479 (1310)
                      +.....+-++|+-.+    .......+...+.+++..+ ..+++++-|  ++.-+ |+++..|..
T Consensus       227 ~~~~~~~~~~I~~~k----~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~-ik~HpfF~~  286 (357)
T KOG0598|consen  227 AEDVKKMYDKILKGK----LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEE-IKRHPFFKG  286 (357)
T ss_pred             CccHHHHHHHHhcCc----CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHH-hhcCccccc
Confidence            888665544431111    1123334666667777776 778888876  33333 666655543

>KOG0583|consensus

Probab=100.00  E-value=1.5e-37  Score=361.84  Aligned_cols=258  Identities=28%  Similarity=0.452  Sum_probs=213.2

Q ss_pred             CCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccC-----c-chhhhhhHHhhhhhhhc-hhhHHHHHHhcCC
Q psy5279         592 EPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS-----H-DTLHQVNTEFDNLRSLR-HERIASLLEAYKP  664 (1310)
Q Consensus       592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  664 (1310)
                      .....+|.+-..|-.|-||.|..|.... |+..||+|++...     . ....++.+|..+++.++ |+||..|+|-+..
T Consensus        13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~-t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t   91 (370)
T KOG0583|consen   13 QLSIGKYELGRTLGSGSFGKVKLAKHRL-TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT   91 (370)
T ss_pred             ccccCceeeeeeecCCCCeeEEEeeecc-CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec
Confidence            3456799999999999999999988777 7899999987774     1 34567778999999999 9999999999988


Q ss_pred             CCcccchhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccc
Q psy5279         665 STTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANL  744 (1310)
Q Consensus       665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  744 (1310)
                      ++.    ..+|||||.|.|++.|+.++...+|.                                               
T Consensus        92 ~~~----~~ivmEy~~gGdL~~~i~~~g~l~E~-----------------------------------------------  120 (370)
T KOG0583|consen   92 PTK----IYIVMEYCSGGDLFDYIVNKGRLKED-----------------------------------------------  120 (370)
T ss_pred             CCe----EEEEEEecCCccHHHHHHHcCCCChH-----------------------------------------------
Confidence            843    88999999999999988765444331                                               


Q ss_pred             cccccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCC
Q psy5279         745 RDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHL  824 (1310)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  824 (1310)
                                                                                                      
T Consensus       121 --------------------------------------------------------------------------------  120 (370)
T KOG0583|consen  121 --------------------------------------------------------------------------------  120 (370)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeee
Q psy5279         825 DWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIP  904 (1310)
Q Consensus       825 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~  904 (1310)
                                                                                                      
T Consensus       121 --------------------------------------------------------------------------------  120 (370)
T KOG0583|consen  121 --------------------------------------------------------------------------------  120 (370)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCC
Q psy5279         905 VVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS  984 (1310)
Q Consensus       905 l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~  984 (1310)
                                                                .++.+|+||++|++|||++||+||||||||||++... 
T Consensus       121 ------------------------------------------~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~-  157 (370)
T KOG0583|consen  121 ------------------------------------------EARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE-  157 (370)
T ss_pred             ------------------------------------------HHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC-
Confidence                                                      2456688999999999999999999999999999753 


Q ss_pred             CcEEEEeeccceee-ccCCcccccCCCCCCcccccccccCCC-CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhc
Q psy5279         985 VQVKLIDLGCTQRV-TKLGTLIHPINTPNPEFAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062 (1310)
Q Consensus       985 ~~VKL~DFGlAk~~-~~~g~~~~~~~tGtp~Y~APEvl~~~~-ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~ 1062 (1310)
                      ..+||+|||++... ...+...+  .+|||.|+|||++.+.. |+                                   
T Consensus       158 ~~~Kl~DFG~s~~~~~~~~~l~t--~cGsp~Y~aPEvl~~~~~Y~-----------------------------------  200 (370)
T KOG0583|consen  158 GNLKLSDFGLSAISPGEDGLLKT--FCGSPAYAAPEVLSGKGTYS-----------------------------------  200 (370)
T ss_pred             CCEEEeccccccccCCCCCcccC--CCCCcccCCHHHhCCCCCcC-----------------------------------
Confidence            67999999999876 23333333  45779999999886543 22                                   


Q ss_pred             cccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcccCCCcccccccc
Q psy5279        1063 FVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKE 1142 (1310)
Q Consensus      1063 ~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~ 1142 (1310)
                                                                                                      
T Consensus       201 --------------------------------------------------------------------------------  200 (370)
T KOG0583|consen  201 --------------------------------------------------------------------------------  200 (370)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccccchhcc-CHHHHHHHHHhhhcCCCCC
Q psy5279        1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL-TQEATRFLMLIFKRAPGKR 1221 (1310)
Q Consensus      1143 qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~i-S~eAkdfI~~lL~~dP~kR 1221 (1310)
                                 +.++||||+|||+|+||+|..||...+...++..|..+.+.+|.   .+ |.+|++||++||..||.+|
T Consensus       201 -----------g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~---~~~S~~~~~Li~~mL~~~P~~R  266 (370)
T KOG0583|consen  201 -----------GKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPS---YLLSPEARSLIEKMLVPDPSTR  266 (370)
T ss_pred             -----------CchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCC---CcCCHHHHHHHHHHcCCCcccC
Confidence                       34577778888888888888888777777777788888888874   45 9999999999999999999


Q ss_pred             CCHHHhhcCCccCC
Q psy5279        1222 PTVEECHENRWLVP 1235 (1310)
Q Consensus      1222 pTa~e~L~HpWl~~ 1235 (1310)
                      +|+.|+++||||..
T Consensus       267 ~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  267 ITLLEILEHPWFQK  280 (370)
T ss_pred             CCHHHHhhChhhcc
Confidence            99999999999987

>KOG0595|consensus

Probab=100.00  E-value=1.3e-36  Score=345.19  Aligned_cols=203  Identities=26%  Similarity=0.472  Sum_probs=174.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC--CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~--~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ...+.|.+.++||+|+||+||+|+++.++..||||.|.++  ..+..+.+..||.||+.|+|||||+|++++++++.+||
T Consensus         7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l   86 (429)
T KOG0595|consen    7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL   86 (429)
T ss_pred             cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence            3457899999999999999999999999999999999876  34566778899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC-CC---CeEEEEeeccceeec
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP-GG---RHLLLTDFGLSRRIT  333 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~-~~---~~VKLsDFGLAr~i~  333 (1310)
                      |||||.||+|.+++.+.+.++|..++.++.||+.||++||+++||||||||+||||+.. .+   ..+||+|||+||...
T Consensus        87 VMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~  166 (429)
T KOG0595|consen   87 VMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ  166 (429)
T ss_pred             EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence            99999999999999999999999999999999999999999999999999999999865 32   579999999999999


Q ss_pred             CCCCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCCc
Q psy5279         334 SFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNSC  404 (1310)
Q Consensus       334 ~~~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~c  404 (1310)
                      +...+.++||+|-|++     |++.-                 ..-|+.=.| | +|..+-...++++|.+.+
T Consensus       167 ~~~~a~tlcGSplYMA-----PEV~~-----------------~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~  217 (429)
T KOG0595|consen  167 PGSMAETLCGSPLYMA-----PEVIM-----------------SQQYDAKADLWSIGTILYQCLTGKPPFDAE  217 (429)
T ss_pred             chhHHHHhhCCccccC-----HHHHH-----------------hccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence            9888999999999987     34321                 011333355 5 555555556666666655

>KOG0575|consensus

Probab=100.00  E-value=1.6e-36  Score=357.63  Aligned_cols=226  Identities=26%  Similarity=0.390  Sum_probs=190.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC---CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~---~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .+|+..+.||+|+|+.||++++..||+.||+|+|.++   +...++.+.+||+|.+.|+|||||+++++|++.+.+|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            6799999999999999999999999999999999874   3456788999999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l  338 (1310)
                      |+|..|+|.+.+.+.+.++|.+++.|++||+.||.|||+++|||||||..||||+.  +.+|||+|||||..+... +.-
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~--~~~VKIgDFGLAt~le~~~Erk  175 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNE--NMNVKIGDFGLATQLEYDGERK  175 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecC--cCcEEecccceeeeecCccccc
Confidence            99999999999998888999999999999999999999999999999999999975  458999999999999855 566


Q ss_pred             CCcccchHHHhhhc----CCCc----cccCCCC--CCCCCCCcchhhhhhhcc---------------cchhhchhhhhh
Q psy5279         339 NPLEYDVRYVRQAL----RHPW----LNFADRK--PTEDTPKLNTDALRNYYN---------------LYKDWYGNAAVR  393 (1310)
Q Consensus       339 ~~~~~t~~yv~~~~----r~P~----l~~~~~~--~~~~~p~~~~~~~~~~~~---------------~~~D~~~~~~l~  393 (1310)
                      .++||||.|+++..    +|.|    +..|-..  -+.-.|+|+...+++.|+               .++|.+...+-+
T Consensus       176 ~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~  255 (592)
T KOG0575|consen  176 KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRP  255 (592)
T ss_pred             ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHHHHhcC
Confidence            78999999987431    1111    1111111  123347787777766554               235666666666


Q ss_pred             hcccCCCCCCccCCCcc
Q psy5279         394 RYYRRRPLNSCYTHPSR  410 (1310)
Q Consensus       394 ~~~~r~~~~~cl~hpw~  410 (1310)
                      +...|+++++++.|+|.
T Consensus       256 ~P~~Rpsl~~vL~h~Ff  272 (592)
T KOG0575|consen  256 NPSERPSLDEVLDHPFF  272 (592)
T ss_pred             CcccCCCHHHHhcCHhh
Confidence            78899999999999997

>KOG0575|consensus

Probab=100.00  E-value=1.9e-37  Score=365.38  Aligned_cols=256  Identities=25%  Similarity=0.464  Sum_probs=219.1

Q ss_pred             cCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeeccc----CcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCC
Q psy5279         591 TEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY----SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPST  666 (1310)
Q Consensus       591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  666 (1310)
                      ++|....|.--.-|-+|-|+-+.++...+ |++.||+|+++-    .+-+...|.+|.+..|+|.|+||..+..-+..+ 
T Consensus        13 ~D~~~~~Y~~g~~LGkGgFA~cYe~~~~~-tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs-   90 (592)
T KOG0575|consen   13 EDPRSKRYKRGRFLGKGGFARCYEARDLD-TGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDS-   90 (592)
T ss_pred             ecCCcceeeeeeeeccCcceEEEEEEEcC-CCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecC-
Confidence            44545566666667789999999876555 999999999997    888899999999999999999999999988887 


Q ss_pred             cccchhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccc
Q psy5279         667 TASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRD  746 (1310)
Q Consensus       667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  746 (1310)
                         +..-+|+|+|.-..+..++-.|...||-+                                                
T Consensus        91 ---~nVYivLELC~~~sL~el~Krrk~ltEpE------------------------------------------------  119 (592)
T KOG0575|consen   91 ---NNVYIVLELCHRGSLMELLKRRKPLTEPE------------------------------------------------  119 (592)
T ss_pred             ---CceEEEEEecCCccHHHHHHhcCCCCcHH------------------------------------------------
Confidence               77788999999888888777666666654                                                


Q ss_pred             cccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCC
Q psy5279         747 VKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDW  826 (1310)
Q Consensus       747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  826 (1310)
                                                                                                      
T Consensus       120 --------------------------------------------------------------------------------  119 (592)
T KOG0575|consen  120 --------------------------------------------------------------------------------  119 (592)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeee
Q psy5279         827 KAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVV  906 (1310)
Q Consensus       827 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~  906 (1310)
                                                                                                      
T Consensus       120 --------------------------------------------------------------------------------  119 (592)
T KOG0575|consen  120 --------------------------------------------------------------------------------  119 (592)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCc
Q psy5279         907 IGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQ  986 (1310)
Q Consensus       907 ~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~  986 (1310)
                                                               ++|+++||+.||.|||++||||||||..|++++.  +.+
T Consensus       120 -----------------------------------------ary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~--~~~  156 (592)
T KOG0575|consen  120 -----------------------------------------ARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNE--NMN  156 (592)
T ss_pred             -----------------------------------------HHHHHHHHHHHHHHHHhcCceecccchhheeecC--cCc
Confidence                                                     4556679999999999999999999999999985  668


Q ss_pred             EEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccc
Q psy5279         987 VKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066 (1310)
Q Consensus       987 VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~ 1066 (1310)
                      |||+|||+|..+...+. .....+|||.|.||||+...                                          
T Consensus       157 VKIgDFGLAt~le~~~E-rk~TlCGTPNYIAPEVl~k~------------------------------------------  193 (592)
T KOG0575|consen  157 VKIGDFGLATQLEYDGE-RKKTLCGTPNYIAPEVLNKS------------------------------------------  193 (592)
T ss_pred             EEecccceeeeecCccc-ccceecCCCcccChhHhccC------------------------------------------
Confidence            99999999988865433 23345678999999886432                                          


Q ss_pred             cccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcccCCCcccccccccchh
Q psy5279        1067 RFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146 (1310)
Q Consensus      1067 ~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPE 1146 (1310)
                                                                                                      
T Consensus       194 --------------------------------------------------------------------------------  193 (592)
T KOG0575|consen  194 --------------------------------------------------------------------------------  193 (592)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccccchhccCHHHHHHHHHhhhcCCCCCCCHHH
Q psy5279        1147 VLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEE 1226 (1310)
Q Consensus      1147 Vl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e 1226 (1310)
                           .++..|||||+||++|+||+|.|||...+-++|+..|...+|.+|   ..+|.+|+|||.+||.+||.+|||+++
T Consensus       194 -----gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P---~~ls~~A~dLI~~lL~~~P~~Rpsl~~  265 (592)
T KOG0575|consen  194 -----GHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMP---SHLSAEAKDLIRKLLRPNPSERPSLDE  265 (592)
T ss_pred             -----CCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccc---cccCHHHHHHHHHHhcCCcccCCCHHH
Confidence                 355678999999999999999999999999999999999999998   489999999999999999999999999


Q ss_pred             hhcCCcc
Q psy5279        1227 CHENRWL 1233 (1310)
Q Consensus      1227 ~L~HpWl 1233 (1310)
                      +|.|+||
T Consensus       266 vL~h~Ff  272 (592)
T KOG0575|consen  266 VLDHPFF  272 (592)
T ss_pred             HhcCHhh
Confidence            9999999

>KOG0599|consensus

Probab=100.00  E-value=5.8e-37  Score=332.20  Aligned_cols=262  Identities=22%  Similarity=0.412  Sum_probs=222.3

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcch---------hhhhhHHhhhhhhh-chhhHHHHHHhcC
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT---------LHQVNTEFDNLRSL-RHERIASLLEAYK  663 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~~~~  663 (1310)
                      -..+|.=-.++-||--|||+.|..|+ |+...|||++.....+         +.+-.+|.+.||.+ -||+|..|+..|.
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~-t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye   93 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKE-TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE   93 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcc-cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence            34566667789999999999999999 9999999999764332         34567899999986 5999999999999


Q ss_pred             CCCcccchhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccc
Q psy5279         664 PSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTAN  743 (1310)
Q Consensus       664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (1310)
                      ++    ....||.|.+.-.++..||.|.-..||.+-                                            
T Consensus        94 s~----sF~FlVFdl~prGELFDyLts~VtlSEK~t--------------------------------------------  125 (411)
T KOG0599|consen   94 SD----AFVFLVFDLMPRGELFDYLTSKVTLSEKET--------------------------------------------  125 (411)
T ss_pred             Cc----chhhhhhhhcccchHHHHhhhheeecHHHH--------------------------------------------
Confidence            88    678899999999999999977655554332                                            


Q ss_pred             ccccccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCC
Q psy5279         744 LRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGH  823 (1310)
Q Consensus       744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  823 (1310)
                                                                                                      
T Consensus       126 --------------------------------------------------------------------------------  125 (411)
T KOG0599|consen  126 --------------------------------------------------------------------------------  125 (411)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceee
Q psy5279         824 LDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITI  903 (1310)
Q Consensus       824 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~  903 (1310)
                                                                                                      
T Consensus       126 --------------------------------------------------------------------------------  125 (411)
T KOG0599|consen  126 --------------------------------------------------------------------------------  125 (411)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeeCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC
Q psy5279         904 PVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR  983 (1310)
Q Consensus       904 ~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~  983 (1310)
                                                                   +.+++|+++|++|||.++||||||||+|||+++  
T Consensus       126 ---------------------------------------------R~iMrqlfegVeylHa~~IVHRDLKpENILldd--  158 (411)
T KOG0599|consen  126 ---------------------------------------------RRIMRQLFEGVEYLHARNIVHRDLKPENILLDD--  158 (411)
T ss_pred             ---------------------------------------------HHHHHHHHHHHHHHHHhhhhhcccChhheeecc--
Confidence                                                         334679999999999999999999999999986  


Q ss_pred             CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcc
Q psy5279         984 SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF 1063 (1310)
Q Consensus       984 ~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~ 1063 (1310)
                      +.++||+|||+|+++.+.......|  |||.|.|||.+...-|                                     
T Consensus       159 n~~i~isDFGFa~~l~~GekLrelC--GTPgYLAPEtikC~m~-------------------------------------  199 (411)
T KOG0599|consen  159 NMNIKISDFGFACQLEPGEKLRELC--GTPGYLAPETIKCSMY-------------------------------------  199 (411)
T ss_pred             ccceEEeccceeeccCCchhHHHhc--CCCcccChhheeeecc-------------------------------------
Confidence            5679999999999987766655544  6799999998742200                                     


Q ss_pred             ccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcccCCCccccccccc
Q psy5279        1064 VRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQ 1143 (1310)
Q Consensus      1064 ~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~q 1143 (1310)
                                                                .                                    .
T Consensus       200 ------------------------------------------e------------------------------------~  201 (411)
T KOG0599|consen  200 ------------------------------------------E------------------------------------N  201 (411)
T ss_pred             ------------------------------------------c------------------------------------C
Confidence                                                      0                                    0


Q ss_pred             chhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccc-cchhccCHHHHHHHHHhhhcCCCCCC
Q psy5279        1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLIFKRAPGKRP 1222 (1310)
Q Consensus      1144 APEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~-~~~~~iS~eAkdfI~~lL~~dP~kRp 1222 (1310)
                            -.+|+..||+|++|||||.||.|++||+-...--.+..|..++|.|. +.|.++|.++||||+++|++||.+|.
T Consensus       202 ------~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ri  275 (411)
T KOG0599|consen  202 ------HPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRI  275 (411)
T ss_pred             ------CCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcc
Confidence                  12488999999999999999999999999888888999999999994 68999999999999999999999999


Q ss_pred             CHHHhhcCCccC
Q psy5279        1223 TVEECHENRWLV 1234 (1310)
Q Consensus      1223 Ta~e~L~HpWl~ 1234 (1310)
                      |++|||.||||.
T Consensus       276 take~LaHpff~  287 (411)
T KOG0599|consen  276 TAKEALAHPFFI  287 (411)
T ss_pred             cHHHHhcChHHH
Confidence            999999999993

>KOG0659|consensus

Probab=100.00  E-value=4.8e-36  Score=325.43  Aligned_cols=224  Identities=25%  Similarity=0.404  Sum_probs=187.4

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|...+.||+|+||+||+|++..||+.||||.|+....  .......|||.+|+.++|||||.|.++|-+.+.+.||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            578899999999999999999999999999999975432  334456799999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC
Q psy5279         261 LAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN  339 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~  339 (1310)
                      ||+. +|...+.... .++..+++.|+.|+++||+|||++.|+||||||.|+|++++|  .+||+||||||.+.+.... 
T Consensus        82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g--~lKiADFGLAr~f~~p~~~-  157 (318)
T KOG0659|consen   82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDG--QLKIADFGLARFFGSPNRI-  157 (318)
T ss_pred             eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCC--cEEeecccchhccCCCCcc-
Confidence            9985 7888887654 499999999999999999999999999999999999998876  8999999999998765433 


Q ss_pred             CcccchHHHhhhcCCCccccCCCCC---------------------CCCCCCcchhhhhhhcccc-----hhhchhhhhh
Q psy5279         340 PLEYDVRYVRQALRHPWLNFADRKP---------------------TEDTPKLNTDALRNYYNLY-----KDWYGNAAVR  393 (1310)
Q Consensus       340 ~~~~t~~yv~~~~r~P~l~~~~~~~---------------------~~~~p~~~~~~~~~~~~~~-----~D~~~~~~l~  393 (1310)
                         .|...+|.|||+|+++|+.+..                     .++ +.++.||+..+|..+     .+|+....++
T Consensus       158 ---~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fp-G~sDidQL~~If~~LGTP~~~~WP~~~~lp  233 (318)
T KOG0659|consen  158 ---QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFP-GDSDIDQLSKIFRALGTPTPDQWPEMTSLP  233 (318)
T ss_pred             ---cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCC-CCchHHHHHHHHHHcCCCCcccCccccccc
Confidence               2344799999999999996543                     333 678899999888655     3354443222


Q ss_pred             ----------------------------------hcccCCCCCCccCCCcceecC
Q psy5279         394 ----------------------------------RYYRRRPLNSCYTHPSRMIYP  414 (1310)
Q Consensus       394 ----------------------------------~~~~r~~~~~cl~hpw~~~~~  414 (1310)
                                                        ...+|.++.|+|.|+|.+..|
T Consensus       234 dY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P  288 (318)
T KOG0659|consen  234 DYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLP  288 (318)
T ss_pred             cHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence                                              246889999999999976555

>KOG0604|consensus

Probab=100.00  E-value=1.7e-36  Score=332.51  Aligned_cols=273  Identities=26%  Similarity=0.482  Sum_probs=216.2

Q ss_pred             ccCCCccccCCCCCcchhhhhh-ccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhhchhhHHHHHHh
Q psy5279         583 EDSPIEWSTEPPTDKYQFISEI-HRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEA  661 (1310)
Q Consensus       583 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  661 (1310)
                      +++-+....-+-|+.|+.-.++ --|--|-|++|-.|. |+.-+|-|++-=++.....|.--   .+.--|++|.++++-
T Consensus        48 ~~~~m~~k~~~itedY~is~qvLG~GinGkV~~C~~k~-T~ekfALKvL~Ds~KARrEVeLH---w~~s~h~~iV~IidV  123 (400)
T KOG0604|consen   48 EESDMDFKEYSITEDYSISWQVLGAGINGKVVQCVHKR-TQEKFALKVLLDSPKARREVELH---WMASGHPHIVSIIDV  123 (400)
T ss_pred             hhhhcchhcccchhhheehhhhhccccCCceEEEEecc-chhhhHHHHHhcCHHHHhHhhhh---hhhcCCCceEEeehh
Confidence            3455566666678888766553 568888899999888 89999999988776655554321   233469999999999


Q ss_pred             cCCCCcccchhhHHHHhhcCchhhhhhhcccc--chhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhc
Q psy5279         662 YKPSTTASNIAVLVMEKLQGADVLSYLSSRHE--YTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSA  739 (1310)
Q Consensus       662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (1310)
                      |.-+-..-.-+.+|||++.|.|+++-+.+|..  |||.+++.|                                     
T Consensus       124 yeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI-------------------------------------  166 (400)
T KOG0604|consen  124 YENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEI-------------------------------------  166 (400)
T ss_pred             hhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHH-------------------------------------
Confidence            99988877888899999999999999999866  888776665                                     


Q ss_pred             ccccccccccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCC
Q psy5279         740 NTANLRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTS  819 (1310)
Q Consensus       740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  819 (1310)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (400)
T KOG0604|consen  167 --------------------------------------------------------------------------------  166 (400)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeec
Q psy5279         820 ENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREK  899 (1310)
Q Consensus       820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~  899 (1310)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (400)
T KOG0604|consen  167 --------------------------------------------------------------------------------  166 (400)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceeeeeeeCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEE
Q psy5279         900 PITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVM  979 (1310)
Q Consensus       900 ~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl  979 (1310)
                                                                          ++||+.|+.|||+.+|.||||||||+|.
T Consensus       167 ----------------------------------------------------~~qI~~Av~~lH~~nIAHRDlKpENLLy  194 (400)
T KOG0604|consen  167 ----------------------------------------------------MKQIGLAVRYLHSMNIAHRDLKPENLLY  194 (400)
T ss_pred             ----------------------------------------------------HHHHHHHHHHHHhcchhhccCChhheee
Confidence                                                                3489999999999999999999999999


Q ss_pred             eecC-CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279         980 ASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus       980 ~~~~-~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      .+.. +..+||+|||+|+.-...+...++|.+  |+|.|||++....                                 
T Consensus       195 t~t~~na~lKLtDfGFAK~t~~~~~L~TPc~T--PyYvaPevlg~eK---------------------------------  239 (400)
T KOG0604|consen  195 TTTSPNAPLKLTDFGFAKETQEPGDLMTPCFT--PYYVAPEVLGPEK---------------------------------  239 (400)
T ss_pred             ecCCCCcceEecccccccccCCCccccCCccc--ccccCHHHhCchh---------------------------------
Confidence            7643 467999999999876655666666654  8888888764333                                 


Q ss_pred             hhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcccCCCcccc
Q psy5279        1059 QNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALF 1138 (1310)
Q Consensus      1059 ~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf 1138 (1310)
                                                                                                      
T Consensus       240 --------------------------------------------------------------------------------  239 (400)
T KOG0604|consen  240 --------------------------------------------------------------------------------  239 (400)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCCh----hhhhhcccccccccc-cchhccCHHHHHHHHHh
Q psy5279        1139 KTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE----PETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213 (1310)
Q Consensus      1139 ~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~----~e~~~~I~~~~~~f~-~~~~~iS~eAkdfI~~l 1213 (1310)
                                    |+..||+||+|||+|+||||++||+...-    +....+|..+.|.|| +.|+.+|++|||+|++|
T Consensus       240 --------------ydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~L  305 (400)
T KOG0604|consen  240 --------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKL  305 (400)
T ss_pred             --------------cCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHH
Confidence                          55566666666666666666666654432    245577899999997 67999999999999999


Q ss_pred             hhcCCCCCCCHHHhhcCCccCCch
Q psy5279        1214 FKRAPGKRPTVEECHENRWLVPSE 1237 (1310)
Q Consensus      1214 L~~dP~kRpTa~e~L~HpWl~~~~ 1237 (1310)
                      |+.+|.+|+|++|+++|||+....
T Consensus       306 Lkt~PteRlTI~~~m~hpwi~~~~  329 (400)
T KOG0604|consen  306 LKTEPTERLTIEEVMDHPWINQYE  329 (400)
T ss_pred             hcCCchhheeHHHhhcCchhcccc
Confidence            999999999999999999996433

>KOG0600|consensus

Probab=100.00  E-value=1.1e-35  Score=343.75  Aligned_cols=196  Identities=27%  Similarity=0.445  Sum_probs=166.9

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~ly  256 (1310)
                      ..+.|+.++.||+|+||.||+|++..||+.||+|.|....  ........|||.||++|+|||||+|.+.....  ..+|
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY  194 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY  194 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence            4578999999999999999999999999999999997554  34455677999999999999999999998877  7999


Q ss_pred             EEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         257 IISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ||+|||+. +|.-.+... -.|++.+++.||+||++||+|||++||+|||||.+||||+++|  .+||+|||||+.+...
T Consensus       195 lVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G--~LKiaDFGLAr~y~~~  271 (560)
T KOG0600|consen  195 LVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNG--VLKIADFGLARFYTPS  271 (560)
T ss_pred             EEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCC--CEEeccccceeeccCC
Confidence            99999986 677766653 3699999999999999999999999999999999999998776  8999999999988765


Q ss_pred             CCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccC
Q psy5279         336 GKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRR  398 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r  398 (1310)
                      +..   .+|...||+|||+|+++++...                |..+.| | .||.+.+.|.+|
T Consensus       272 ~~~---~~T~rVvTLWYRpPELLLG~t~----------------Yg~aVDlWS~GCIl~El~~gk  317 (560)
T KOG0600|consen  272 GSA---PYTSRVVTLWYRPPELLLGATS----------------YGTAVDLWSVGCILAELFLGK  317 (560)
T ss_pred             CCc---ccccceEEeeccChHHhcCCcc----------------cccceeehhhhHHHHHHHcCC
Confidence            432   3788889999999999988654                444556 5 566666665555

>KOG0616|consensus

Probab=100.00  E-value=4e-36  Score=329.83  Aligned_cols=238  Identities=23%  Similarity=0.367  Sum_probs=199.3

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      --++|++.+.||.|+||+|.+++++.+|.-||+|++++..-   +..+...+|..+|+.+.||++|+|++.|.+.+.+||
T Consensus        42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lym  121 (355)
T KOG0616|consen   42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYM  121 (355)
T ss_pred             chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEE
Confidence            34789999999999999999999999999999999986532   334557789999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      ||||++||+|+.++.+.+.|+|..+++|++||+.||+|||+++|++||||||||||+.+|  ++||+|||+||++...  
T Consensus       122 vmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G--~iKitDFGFAK~v~~r--  197 (355)
T KOG0616|consen  122 VMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNG--HIKITDFGFAKRVSGR--  197 (355)
T ss_pred             EEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCC--cEEEEeccceEEecCc--
Confidence            999999999999999999999999999999999999999999999999999999999876  9999999999998654  


Q ss_pred             CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCCC
Q psy5279         338 LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGT  417 (1310)
Q Consensus       338 l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~  417 (1310)
                      .-++||||.|++     |++..                 .+-|+-+.|||+.             .+|...++.++||+.
T Consensus       198 T~TlCGTPeYLA-----PEii~-----------------sk~ynkavDWWal-------------GVLIYEMlaG~pPF~  242 (355)
T KOG0616|consen  198 TWTLCGTPEYLA-----PEIIQ-----------------SKGYNKAVDWWAL-------------GVLIYEMLAGYPPFY  242 (355)
T ss_pred             EEEecCCccccC-----hHHhh-----------------cCCCCcchhHHHH-------------HHHHHHHHcCCCCCc
Confidence            668999999986     44421                 1337888999988             777888889999999


Q ss_pred             CCCCCCCCcceecccccccccccccccCCCCCCCcccc-cCCCCCC
Q psy5279         418 QFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWE-DNVPNRG  462 (1310)
Q Consensus       418 ~~tp~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~~~-d~v~e~~  462 (1310)
                      ...|-.+.++| ++...+    .+-.+...++++++.+ +++..++
T Consensus       243 ~~~~~~iY~KI-~~~~v~----fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  243 DDNPIQIYEKI-LEGKVK----FPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             CCChHHHHHHH-HhCccc----CCcccCHHHHHHHHHHHhhhhHhh
Confidence            99886667776 555444    3333333336666655 5544443

>KOG0607|consensus

Probab=100.00  E-value=3.5e-36  Score=331.55  Aligned_cols=280  Identities=22%  Similarity=0.369  Sum_probs=199.8

Q ss_pred             HHHhhhhccccccchh-----hhhhhcc-cCCCchh----------hHh-HHHHHhhhcCCCC--CceeecceeeeeeeC
Q psy5279         848 ERRNRINKYGAADTYT-----LRRLRHE-IGTRPEA----------HVE-ADALIESRRDGHA--PFFREKPITIPVVIG  908 (1310)
Q Consensus       848 ~r~~~~~~~~~~~~~~-----~~~l~~e-~~~~~~~----------~~~-a~~~ie~~~~~~~--~ffrE~~~~~~l~~g  908 (1310)
                      -||+|.++.+++++..     ++.|..| +|.+|++          .+| |+++|+++ .+|.  ..|||+....     
T Consensus        57 ~rrk~rk~gr~~ss~~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-~gHsR~RvfREVe~f~-----  130 (463)
T KOG0607|consen   57 RRRKKRKRGRATSSLSGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-PGHSRSRVFREVETFY-----  130 (463)
T ss_pred             cccccccCCcccccccchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC-CchHHHHHHHHHHHHH-----
Confidence            3456666777777654     8999998 6999987          566 99999998 6777  8999998743     


Q ss_pred             CEEEEEEeccCCCcceeeecccCCcccccccc-------------cCCCchhHHHHHHHHHHHHHHHHHCCceecccCCC
Q psy5279         909 DKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPI-------------VIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPD  975 (1310)
Q Consensus       909 ~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~-------------~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPe  975 (1310)
                           .|....+...+++||+.....+++++.             ....++.+..+++.|+.||+|||.+||.||||||+
T Consensus       131 -----~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPE  205 (463)
T KOG0607|consen  131 -----QCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPE  205 (463)
T ss_pred             -----HhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCcc
Confidence                 244444556678888877776666532             23467788899999999999999999999999999


Q ss_pred             cEEEeecC-CCcEEEEeeccceeeccCC------cccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCC
Q psy5279         976 NVVMASVR-SVQVKLIDLGCTQRVTKLG------TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048 (1310)
Q Consensus       976 NILl~~~~-~~~VKL~DFGlAk~~~~~g------~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~P 1048 (1310)
                      |||....+ -..||||||-+...+...+      +..-...+|+..|||||+..-         |          .|.  
T Consensus       206 NiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~---------f----------v~q--  264 (463)
T KOG0607|consen  206 NILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDV---------F----------VDQ--  264 (463)
T ss_pred             ceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhh---------h----------ccc--
Confidence            99997643 3469999998765432111      111122345678999987520         0          000  


Q ss_pred             CCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCC
Q psy5279        1049 FRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGW 1128 (1310)
Q Consensus      1049 F~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~ 1128 (1310)
                                                                                                      
T Consensus       265 --------------------------------------------------------------------------------  264 (463)
T KOG0607|consen  265 --------------------------------------------------------------------------------  264 (463)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCC---------------hhhhhhccccccc
Q psy5279        1129 SEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS---------------EPETRQNVNFVRY 1193 (1310)
Q Consensus      1129 s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~---------------~~e~~~~I~~~~~ 1193 (1310)
                                           -.-|+..||.||+|||+|+||+|++||.|.-               .+..+..|..+.|
T Consensus       265 ---------------------A~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkY  323 (463)
T KOG0607|consen  265 ---------------------ATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKY  323 (463)
T ss_pred             ---------------------cccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCC
Confidence                                 0015555666666666666666666664431               2346788999999


Q ss_pred             ccc-cchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCC-------chhHHHHHHHHHHhhhhhhHhHHHHhhh
Q psy5279        1194 RFE-YLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVP-------SEYMIKKRERAVFLGNRLKEFSDEYHDL 1263 (1310)
Q Consensus      1194 ~f~-~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~-------~~~~~~~~~~~~~~~~~lk~~~~~~~~~ 1263 (1310)
                      .|| ..|..||.+|||+|+.||++||.+|.+|.+.|+|||+..       ...++..|...++   -|..|+..+.++
T Consensus       324 eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ekalptp~v~~r~~s~~---~lslfa~~aia~  398 (463)
T KOG0607|consen  324 EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPEKALPTPQVLQRNSSTM---DLSLFAAEAIAL  398 (463)
T ss_pred             cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchhccCCCCcccccCccch---hhHHHHHHHHHH
Confidence            997 579999999999999999999999999999999999943       2234555555554   466677666665

>KOG0032|consensus

Probab=100.00  E-value=3.5e-35  Score=342.92  Aligned_cols=232  Identities=29%  Similarity=0.469  Sum_probs=198.5

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhcC-CCCcceEEEEEEeCCe
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ---YKSLFKNELDIMNQLC-HRNLVRLHDSYETKDS  254 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~---~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~~  254 (1310)
                      ..+.+.|++.++||+|.||.||+|+++.||+.+|+|+|.++...   ....+.+|+.||++|. |||||+++++|++...
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~  110 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS  110 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence            36788999999999999999999999999999999999876543   3468999999999998 9999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC--CeEEEEeeccceee
Q psy5279         255 FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRRI  332 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~--~~VKLsDFGLAr~i  332 (1310)
                      +|+|||+|.||+|++++... .++|.++..+++|++.|+.|||++||+||||||||+|+.....  ..+|++|||||+..
T Consensus       111 ~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~  189 (382)
T KOG0032|consen  111 VYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI  189 (382)
T ss_pred             EEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence            99999999999999999887 5999999999999999999999999999999999999986643  47999999999999


Q ss_pred             cCCCCCCCcccchHHHhhh-------------------------cCCCccccCCCCC----CCCCCCcchhhhhhhcccc
Q psy5279         333 TSFGKLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKP----TEDTPKLNTDALRNYYNLY  383 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~  383 (1310)
                      .....+...|||+.|+++.                         +..||........    ....+.+..+.+.+++..+
T Consensus       190 ~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~a  269 (382)
T KOG0032|consen  190 KPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESA  269 (382)
T ss_pred             cCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHH
Confidence            8866788889998887742                         2235544331111    1112345666777778888


Q ss_pred             hhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         384 KDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       384 ~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +|++...+..+..+|+|+.+||.|||+.
T Consensus       270 kd~i~~ll~~dp~~R~ta~~~L~HpWi~  297 (382)
T KOG0032|consen  270 KDFIRKLLEFDPRKRLTAAQALQHPWIK  297 (382)
T ss_pred             HHHHHHhcccCcccCCCHHHHhcCcccc
Confidence            9999999999999999999999999964

>KOG0593|consensus

Probab=100.00  E-value=1.3e-35  Score=326.12  Aligned_cols=174  Identities=23%  Similarity=0.377  Sum_probs=151.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      +.|+.+.++|+|+||+||+|+++.||+.||||++....  ...++...|||.+|++|+|||+|.|+++|.....++||+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            57889999999999999999999999999999886442  3456778899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCCC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP  340 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~~  340 (1310)
                      ||...-|.+.-.....+++..++.|++|++.|+.|||+++|||||||||||||+.++  .+||||||+||.+..++.   
T Consensus        82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~g--vvKLCDFGFAR~L~~pgd---  156 (396)
T KOG0593|consen   82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNG--VVKLCDFGFARTLSAPGD---  156 (396)
T ss_pred             ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCC--cEEeccchhhHhhcCCcc---
Confidence            999765544444445699999999999999999999999999999999999999766  899999999999874432   


Q ss_pred             cccchHHHhhhcCCCccccCCC
Q psy5279         341 LEYDVRYVRQALRHPWLNFADR  362 (1310)
Q Consensus       341 ~~~t~~yv~~~~r~P~l~~~~~  362 (1310)
                       .||--.+|+|||+|+++.+|-
T Consensus       157 -~YTDYVATRWYRaPELLvGDt  177 (396)
T KOG0593|consen  157 -NYTDYVATRWYRAPELLVGDT  177 (396)
T ss_pred             -hhhhhhhhhhccChhhhcccC
Confidence             355555789999999988843

>KOG0663|consensus

Probab=100.00  E-value=1.4e-34  Score=321.35  Aligned_cols=222  Identities=23%  Similarity=0.308  Sum_probs=180.8

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~lyL  257 (1310)
                      -+.|+.+..|++|+||.||+|+++.|++.||+|.++-..  ....-.-.|||.+|.+++|||||.+.++....  +.+||
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~  154 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI  154 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence            356889999999999999999999999999999987443  23333457999999999999999999988654  57999


Q ss_pred             EEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         258 ISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |||||+. +|...+..- ..|+..+++.++.|++.||+|||.+.|+||||||+|+|+++.|  .+||+||||||.+.+.-
T Consensus       155 VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G--~lKiaDFGLAR~ygsp~  231 (419)
T KOG0663|consen  155 VMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKG--ILKIADFGLAREYGSPL  231 (419)
T ss_pred             eHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCC--cEEecccchhhhhcCCc
Confidence            9999997 444444332 4699999999999999999999999999999999999999876  79999999999987642


Q ss_pred             CCCCcccchHHHhhhcCCCccccCCC---------------------CCCCCCCCcchhhhhhhcccc-----hhhchhh
Q psy5279         337 KLNPLEYDVRYVRQALRHPWLNFADR---------------------KPTEDTPKLNTDALRNYYNLY-----KDWYGNA  390 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~~r~P~l~~~~~---------------------~~~~~~p~~~~~~~~~~~~~~-----~D~~~~~  390 (1310)
                          ..+|+-.||+|||+|+++++..                     +|+++ +.++.+|+..||..+     .+|+|..
T Consensus       232 ----k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~-G~sE~dQl~~If~llGtPte~iwpg~~  306 (419)
T KOG0663|consen  232 ----KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFP-GKSEIDQLDKIFKLLGTPSEAIWPGYS  306 (419)
T ss_pred             ----ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCC-CCchHHHHHHHHHHhCCCccccCCCcc
Confidence                2356677999999999999843                     44554 778999999888655     4455543


Q ss_pred             hhh--------------------------------------hcccCCCCCCccCCCcce
Q psy5279         391 AVR--------------------------------------RYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       391 ~l~--------------------------------------~~~~r~~~~~cl~hpw~~  411 (1310)
                      .++                                      +..+|.|+++||.|+|..
T Consensus       307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~  365 (419)
T KOG0663|consen  307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFR  365 (419)
T ss_pred             ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccc
Confidence            211                                      246789999999999964

>KOG0595|consensus

Probab=100.00  E-value=2.8e-35  Score=334.35  Aligned_cols=261  Identities=24%  Similarity=0.400  Sum_probs=219.6

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccC---cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCccc
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS---HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTAS  669 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  669 (1310)
                      +.-+.|.+.++|-+|-||||.||.-+- +++.||.|-+.-.   ......+..|+..||+|+||||..|++.-..+    
T Consensus         7 ~~~~~y~~~~~iG~GsfavVykg~h~~-~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~----   81 (429)
T KOG0595|consen    7 RVVGDYELSREIGSGSFAVVYKGRHKK-SGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD----   81 (429)
T ss_pred             cccccceehhhccCcceEEEEEeEecc-CCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC----
Confidence            445789999999999999999999998 5599999988765   34455568999999999999999999998888    


Q ss_pred             chhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccccccc
Q psy5279         670 NIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKT  749 (1310)
Q Consensus       670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  749 (1310)
                      +...||||||.|.|+-.|+..|..-.|.                                                    
T Consensus        82 ~~i~lVMEyC~gGDLs~yi~~~~~l~e~----------------------------------------------------  109 (429)
T KOG0595|consen   82 DFIYLVMEYCNGGDLSDYIRRRGRLPEA----------------------------------------------------  109 (429)
T ss_pred             CeEEEEEEeCCCCCHHHHHHHcCCCCHH----------------------------------------------------
Confidence            6889999999999998888665422221                                                    


Q ss_pred             ccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcc
Q psy5279         750 WEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAP  829 (1310)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  829 (1310)
                                                                                                      
T Consensus       110 --------------------------------------------------------------------------------  109 (429)
T KOG0595|consen  110 --------------------------------------------------------------------------------  109 (429)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCC
Q psy5279         830 VIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGD  909 (1310)
Q Consensus       830 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~  909 (1310)
                                                                                                      
T Consensus       110 --------------------------------------------------------------------------------  109 (429)
T KOG0595|consen  110 --------------------------------------------------------------------------------  109 (429)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec-CC---C
Q psy5279         910 KLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RS---V  985 (1310)
Q Consensus       910 ~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~-~~---~  985 (1310)
                                                           .++.+++||+.||++||+++||||||||+||||+.. +.   .
T Consensus       110 -------------------------------------t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~  152 (429)
T KOG0595|consen  110 -------------------------------------TARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSP  152 (429)
T ss_pred             -------------------------------------HHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCc
Confidence                                                 134557899999999999999999999999999874 33   5


Q ss_pred             cEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc
Q psy5279         986 QVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065 (1310)
Q Consensus       986 ~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~ 1065 (1310)
                      .+||+|||+|+.+.......+  .+|+|.|||||++..+.|+.|+|+||+|+|+|+|++|++||...+..++...++...
T Consensus       153 ~LKIADFGfAR~L~~~~~a~t--lcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~  230 (429)
T KOG0595|consen  153 VLKIADFGFARFLQPGSMAET--LCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGN  230 (429)
T ss_pred             eEEecccchhhhCCchhHHHH--hhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccc
Confidence            799999999998875444333  457899999999999999999999999999999999999999999999998888777


Q ss_pred             ccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcccccc
Q psy5279        1066 YRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHVKD 1109 (1310)
Q Consensus      1066 ~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~~~ 1109 (1310)
                      .-.+.....+++...+++..++. .+.+|+...+...|++.....
T Consensus       231 ~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  231 EIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             cccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence            76677777888888888876665 667899999989888765443

>KOG0593|consensus

Probab=100.00  E-value=2.5e-34  Score=315.99  Aligned_cols=111  Identities=22%  Similarity=0.382  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~y 1026 (1310)
                      ..-++.|++.|+.|||+++|||||||||||||+.  ++.+||||||+|+.+...+...+.. ..|.+|+|||.+.+ ..|
T Consensus       103 vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~--~gvvKLCDFGFAR~L~~pgd~YTDY-VATRWYRaPELLvGDtqY  179 (396)
T KOG0593|consen  103 VKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQ--NGVVKLCDFGFARTLSAPGDNYTDY-VATRWYRAPELLVGDTQY  179 (396)
T ss_pred             HHHHHHHHHHHhhhhhhcCeecccCChhheEEec--CCcEEeccchhhHhhcCCcchhhhh-hhhhhccChhhhcccCcC
Confidence            4456789999999999999999999999999986  5679999999999887545443322 34689999999998 589


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I 1061 (1310)
                      +.++||||+||++.||++|.+-|.|.++-+....|
T Consensus       180 G~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I  214 (396)
T KOG0593|consen  180 GKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLI  214 (396)
T ss_pred             CCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHH
Confidence            99999999999999999999999999876655444

>KOG0588|consensus

Probab=100.00  E-value=1.2e-34  Score=342.43  Aligned_cols=153  Identities=27%  Similarity=0.472  Sum_probs=120.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ++.++.||++|+.|||..+|+||||||||+|++..+  .+||+|||+|....+.....+.|  |+|.|.|||++.+.+|+
T Consensus       114 aa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~--nIKIADFGMAsLe~~gklLeTSC--GSPHYA~PEIV~G~pYd  189 (786)
T KOG0588|consen  114 AAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN--NIKIADFGMASLEVPGKLLETSC--GSPHYAAPEIVSGRPYD  189 (786)
T ss_pred             HHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc--CEeeeccceeecccCCccccccC--CCcccCCchhhcCCCCC
Confidence            344567999999999999999999999999998744  39999999997655544444444  67999999998877664


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccc
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~ 1107 (1310)
                                                                                                      
T Consensus       190 --------------------------------------------------------------------------------  189 (786)
T KOG0588|consen  190 --------------------------------------------------------------------------------  189 (786)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhc
Q psy5279        1108 KDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1187 (1310)
Q Consensus      1108 ~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~ 1187 (1310)
                                                                    +.++||||||||+|.||+|..||.++|-...+..
T Consensus       190 ----------------------------------------------G~~sDVWSCGVILfALLtG~LPFdDdNir~LLlK  223 (786)
T KOG0588|consen  190 ----------------------------------------------GRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLK  223 (786)
T ss_pred             ----------------------------------------------CCccccchhHHHHHHHHhCCCCCCCccHHHHHHH
Confidence                                                          2234555555555555555555555555556666


Q ss_pred             ccccccccccchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCcc
Q psy5279        1188 VNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233 (1310)
Q Consensus      1188 I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl 1233 (1310)
                      |.++.|..|   ..||.+|+|||++||.+||++|+|.+|+++|||+
T Consensus       224 V~~G~f~MP---s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l  266 (786)
T KOG0588|consen  224 VQRGVFEMP---SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFL  266 (786)
T ss_pred             HHcCcccCC---CcCCHHHHHHHHHHhccCccccccHHHHhhCchh
Confidence            777777777   6899999999999999999999999999999999

>KOG0661|consensus

Probab=100.00  E-value=1.1e-34  Score=333.64  Aligned_cols=193  Identities=23%  Similarity=0.365  Sum_probs=162.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHH-HHHHHHHHHHhcC-CCCcceEEEEEEeCC-eEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKS-LFKNELDIMNQLC-HRNLVRLHDSYETKD-SFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~-~~~rEI~IL~~L~-HPNIVkL~d~f~~~~-~ly  256 (1310)
                      .+.++|.+.++||.|+||.||+|+.+.+|..||||.++++-....+ .-.||+..|++|+ |||||+|++++.+.+ .+|
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~   86 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY   86 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence            4678999999999999999999999999999999999766433333 2358999999999 999999999999988 999


Q ss_pred             EEEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         257 IISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      +|||||.. +|++.+..+. .|+|.+++.||+||++||+|+|.+|+.|||||||||||..  ...|||+||||||.+.+.
T Consensus        87 fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~--~~~iKiaDFGLARev~Sk  163 (538)
T KOG0661|consen   87 FVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG--NDVIKIADFGLAREVRSK  163 (538)
T ss_pred             eeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc--cceeEecccccccccccC
Confidence            99999985 6888887654 4999999999999999999999999999999999999974  347999999999998664


Q ss_pred             CCCCCcccchHHHhhhcCCCccccCCCC---------------------CCCCCCCcchhhhhhhcc
Q psy5279         336 GKLNPLEYDVRYVRQALRHPWLNFADRK---------------------PTEDTPKLNTDALRNYYN  381 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~~r~P~l~~~~~~---------------------~~~~~p~~~~~~~~~~~~  381 (1310)
                      ..     ||--.-|+|||+|++++.+..                     |+|+ +..+.||+.+|-+
T Consensus       164 pP-----YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFP-G~sE~Dqi~KIc~  224 (538)
T KOG0661|consen  164 PP-----YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFP-GASEIDQIYKICE  224 (538)
T ss_pred             CC-----cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCC-CCcHHHHHHHHHH
Confidence            33     444446799999999888544                     4444 5667788765543

>KOG0583|consensus

Probab=100.00  E-value=1.5e-33  Score=328.32  Aligned_cols=170  Identities=30%  Similarity=0.483  Sum_probs=155.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC----Cc-chHHHHHHHHHHHHhcC-CCCcceEEEEEEeCC
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK----GN-QYKSLFKNELDIMNQLC-HRNLVRLHDSYETKD  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~----~~-~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~  253 (1310)
                      .....|.+.+.||+|+||+|+.|.+..+|+.||+|++.++    .. ...+.+.+|+.+|+.+. ||||+++++++.++.
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            4567899999999999999999999999999999987654    12 23456779999999998 999999999999999


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee-
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI-  332 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i-  332 (1310)
                      .+|+|||||.||+|++.+...+.+.|.+++.+++||+.||+|||++||+||||||||||++.+. ..+||+|||+|... 
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~-~~~Kl~DFG~s~~~~  172 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE-GNLKLSDFGLSAISP  172 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC-CCEEEeccccccccC
Confidence            9999999999999999999988999999999999999999999999999999999999998763 48999999999988 


Q ss_pred             cCCCCCCCcccchHHHhh
Q psy5279         333 TSFGKLNPLEYDVRYVRQ  350 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv~~  350 (1310)
                      ...+.+++.|||+.|+++
T Consensus       173 ~~~~~l~t~cGsp~Y~aP  190 (370)
T KOG0583|consen  173 GEDGLLKTFCGSPAYAAP  190 (370)
T ss_pred             CCCCcccCCCCCcccCCH
Confidence            577889999999999885

>KOG0605|consensus

Probab=100.00  E-value=1.7e-33  Score=328.05  Aligned_cols=279  Identities=21%  Similarity=0.340  Sum_probs=184.2

Q ss_pred             cccchhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEE-eccCCC-cceeeecccCCc
Q psy5279         858 AADTYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKC-LAVGEP-KPVIQWFKLGTS  933 (1310)
Q Consensus       858 ~~~~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~-l~~G~p-~~vi~~f~~g~~  933 (1310)
                      --++||||+||+.  +...+++|+.||+-|....+  .++.              |.+.| .+..+- ..+|+|+.+|+.
T Consensus       165 Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~d--s~~v--------------VKLyYsFQD~~~LYLiMEylPGGD~  228 (550)
T KOG0605|consen  165 TGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVD--SPWV--------------VKLYYSFQDKEYLYLIMEYLPGGDM  228 (550)
T ss_pred             CCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcC--CCcE--------------EEEEEEecCCCeeEEEEEecCCccH
Confidence            4589999999944  69999999999998876533  3333              33333 233333 334565655555


Q ss_pred             ccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCC
Q psy5279         934 TLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013 (1310)
Q Consensus       934 l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp 1013 (1310)
                      ..+++......++.+++++.+.+.||+-+|+.|+|||||||+|+||+.  .+++||+|||+|..+......        -
T Consensus       229 mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~--~GHiKLSDFGLs~gl~~~~~~--------~  298 (550)
T KOG0605|consen  229 MTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDA--KGHIKLSDFGLSTGLDKKHRI--------E  298 (550)
T ss_pred             HHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecC--CCCEeeccccccchhhhhhhh--------h
Confidence            555555556677778999999999999999999999999999999986  678999999998533221110        0


Q ss_pred             cccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcch
Q psy5279        1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDW 1093 (1310)
Q Consensus      1014 ~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~r 1093 (1310)
                      .|.--+.         .+.         -+....|                 ..++..                ..+..+
T Consensus       299 ~~~~~~~---------~~~---------~~~~~~~-----------------~~~~~~----------------~~~~~~  327 (550)
T KOG0605|consen  299 SYRLDEQ---------MQI---------NLSEAKP-----------------SDFPKF----------------NTPRST  327 (550)
T ss_pred             hhcchhh---------hhh---------hhccCCC-----------------cccccc----------------ccccch
Confidence            0000000         000         0000000                 000000                000000


Q ss_pred             hcHHhhhCCCcccccccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCC
Q psy5279        1094 ITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA 1173 (1310)
Q Consensus      1094 it~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~ 1173 (1310)
                      +.-.+.+++  |..         +-+.-|.     |.-|.      +..-||||+.+.+|+..||+||+|||+||||+|.
T Consensus       328 ~~~~~~~~~--w~~---------nrr~~a~-----StVGT------PDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGy  385 (550)
T KOG0605|consen  328 MSRREQLQT--WKR---------NRRQLAY-----STVGT------PDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGY  385 (550)
T ss_pred             hhHHHHHHH--HHh---------hhhhhhh-----cccCC------ccccchHHHhcCCCCccccHHHHHHHHHHHHhCC
Confidence            000000000  000         0011111     11222      3667999999999999999999999999999999


Q ss_pred             CCCCCCChhhhhhcccccc--cccccchhccCHHHHHHHHHhhhcCCCCCCC---HHHhhcCCccCCch
Q psy5279        1174 SPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKRAPGKRPT---VEECHENRWLVPSE 1237 (1310)
Q Consensus      1174 ~PF~g~~~~e~~~~I~~~~--~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpT---a~e~L~HpWl~~~~ 1237 (1310)
                      |||.+++.++|+.+|..-+  +.||. -..+|.+|+|||.|||. ||.+|+.   ++|+.+||||...+
T Consensus       386 PPF~s~tp~~T~rkI~nwr~~l~fP~-~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~  452 (550)
T KOG0605|consen  386 PPFCSETPQETYRKIVNWRETLKFPE-EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD  452 (550)
T ss_pred             CCCCCCCHHHHHHHHHHHhhhccCCC-cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence            9999999999999999777  56653 24689999999999999 9999995   99999999996544

>KOG0592|consensus

Probab=100.00  E-value=5.1e-34  Score=331.98  Aligned_cols=227  Identities=23%  Similarity=0.376  Sum_probs=181.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~ly  256 (1310)
                      -..+|.+++.||+|+|++|++|+++.|+++||||++.++-   .+..+-+.+|-.+|.+| .||.||+|+..|+++..+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            3467899999999999999999999999999999997642   22234577899999999 8999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      +|+||+++|+|++.+.+.+.|+|..+++|+.||+.||+|||++||||||||||||||+.++  ++||+|||-|+.+.+..
T Consensus       151 FvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dm--hikITDFGsAK~l~~~~  228 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDG--HIKITDFGSAKILSPSQ  228 (604)
T ss_pred             EEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCC--cEEEeeccccccCChhh
Confidence            9999999999999999999999999999999999999999999999999999999998655  99999999999886422


Q ss_pred             C--------------CCCcccchHHHhhhcCC--------CccccC-------CCCCCCCCCCcchhhhh----------
Q psy5279         337 K--------------LNPLEYDVRYVRQALRH--------PWLNFA-------DRKPTEDTPKLNTDALR----------  377 (1310)
Q Consensus       337 ~--------------l~~~~~t~~yv~~~~r~--------P~l~~~-------~~~~~~~~p~~~~~~~~----------  377 (1310)
                      .              ..+++||..||.+.+..        -.+.|+       ...|.|.. ..+--.++          
T Consensus       229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra-~NeyliFqkI~~l~y~fp  307 (604)
T KOG0592|consen  229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRA-ANEYLIFQKIQALDYEFP  307 (604)
T ss_pred             ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcc-ccHHHHHHHHHHhcccCC
Confidence            1              14588999998753221        001111       12222210 00111111          


Q ss_pred             -hhcccchhhchhhhhhhcccCCCCCCccCCCcc
Q psy5279         378 -NYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSR  410 (1310)
Q Consensus       378 -~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~  410 (1310)
                       ++...+.|.+...++.+...|.++.++-+||+.
T Consensus       308 ~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF  341 (604)
T KOG0592|consen  308 EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFF  341 (604)
T ss_pred             CCCCHHHHHHHHHHHccCccccccHHHHhhCccc
Confidence             223455788888999999999999999999995

>KOG0694|consensus

Probab=100.00  E-value=3.2e-33  Score=332.83  Aligned_cols=234  Identities=23%  Similarity=0.384  Sum_probs=190.8

Q ss_pred             ccccchhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcc
Q psy5279         857 GAADTYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTST  934 (1310)
Q Consensus       857 ~~~~~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l  934 (1310)
                      .-.+.||||.||++  +....+..++.|+.|..... .+||+.....+++-.....++|+++.+|+   ++.        
T Consensus       391 ~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~-~HPFL~~L~~~fQT~~~l~fvmey~~Ggd---m~~--------  458 (694)
T KOG0694|consen  391 GTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN-RHPFLVNLFSCFQTKEHLFFVMEYVAGGD---LMH--------  458 (694)
T ss_pred             CCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc-cCCeEeecccccccCCeEEEEEEecCCCc---EEE--------
Confidence            34568999999976  58899999999999988877 68899999888886666667888877776   222        


Q ss_pred             cccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCc
Q psy5279         935 LCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014 (1310)
Q Consensus       935 ~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~ 1014 (1310)
                        +.......+..+++++..|+.||+|||++||||||||.+|||++.  .+++||+|||+++..-..+. .+.+.+|||.
T Consensus       459 --~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~--eGh~kiADFGlcKe~m~~g~-~TsTfCGTpe  533 (694)
T KOG0694|consen  459 --HIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDT--EGHVKIADFGLCKEGMGQGD-RTSTFCGTPE  533 (694)
T ss_pred             --EEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcc--cCcEEecccccccccCCCCC-ccccccCChh
Confidence              222234566678999999999999999999999999999999986  67899999999986543333 4556778899


Q ss_pred             ccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchh
Q psy5279        1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWI 1094 (1310)
Q Consensus      1015 Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~ri 1094 (1310)
                      |||||++.+.                                                                      
T Consensus       534 y~aPEil~e~----------------------------------------------------------------------  543 (694)
T KOG0694|consen  534 FLAPEVLTEQ----------------------------------------------------------------------  543 (694)
T ss_pred             hcChhhhccC----------------------------------------------------------------------
Confidence            9999886543                                                                      


Q ss_pred             cHHhhhCCCcccccccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCC
Q psy5279        1095 TLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1174 (1310)
Q Consensus      1095 t~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~ 1174 (1310)
                                                                               .|+.+|||||+||++|+||+|.+
T Consensus       544 ---------------------------------------------------------~Yt~aVDWW~lGVLlyeML~Gq~  566 (694)
T KOG0694|consen  544 ---------------------------------------------------------SYTRAVDWWGLGVLLYEMLVGES  566 (694)
T ss_pred             ---------------------------------------------------------cccchhhHHHHHHHHHHHHcCCC
Confidence                                                                     36677788888888888888888


Q ss_pred             CCCCCChhhhhhcccccccccccchhccCHHHHHHHHHhhhcCCCCCCC-----HHHhhcCCccCCch
Q psy5279        1175 PFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPT-----VEECHENRWLVPSE 1237 (1310)
Q Consensus      1175 PF~g~~~~e~~~~I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpT-----a~e~L~HpWl~~~~ 1237 (1310)
                      ||.|++++|.+.+|..-++.+|   .++|.||.+++++||.+||.+|+.     ++++..||+|-..+
T Consensus       567 PF~gddEee~FdsI~~d~~~yP---~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~  631 (694)
T KOG0694|consen  567 PFPGDDEEEVFDSIVNDEVRYP---RFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID  631 (694)
T ss_pred             CCCCCCHHHHHHHHhcCCCCCC---CcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCC
Confidence            8888888888888888777776   689999999999999999999996     58999999996655

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-33  Score=314.09  Aligned_cols=98  Identities=26%  Similarity=0.519  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++......    ....|++.|+|||++.+..++.++
T Consensus       106 ~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~--~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~  179 (291)
T cd05612         106 YASEIVCALEYLHSKEIVYRDLKPENILLDK--EGHIKLTDFGFAKKLRDRT----WTLCGTPEYLAPEVIQSKGHNKAV  179 (291)
T ss_pred             HHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEEEecCcchhccCCc----ccccCChhhcCHHHHcCCCCCchh
Confidence            4569999999999999999999999999975  4579999999987553211    123577999999999999999999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      |||||||++|+|++|..||.+.+.
T Consensus       180 DiwSlG~il~~l~~g~~pf~~~~~  203 (291)
T cd05612         180 DWWALGILIYEMLVGYPPFFDDNP  203 (291)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999976543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0597|consensus

Probab=100.00  E-value=1.3e-33  Score=327.65  Aligned_cols=253  Identities=26%  Similarity=0.419  Sum_probs=216.1

Q ss_pred             CcchhhhhhccccchhhhHHHHhhccccceeeeecccCc---chhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchh
Q psy5279         596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH---DTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIA  672 (1310)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  672 (1310)
                      ..|..+++|-+|.||+|.|++.|- |.+.||.|.+.-+-   ..++.+.+|.+.+|+|+|+||...+|-|..+    ++.
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~-t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~----~~~   76 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKY-TIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETS----AHL   76 (808)
T ss_pred             cchhHHHHhcCCccceeeeccccc-ceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhccc----ceE
Confidence            368889999999999999999998 99999999998654   4568899999999999999999999999988    899


Q ss_pred             hHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccccccccC
Q psy5279         673 VLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWED  752 (1310)
Q Consensus       673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  752 (1310)
                      ++|.|||+| |+-.+|+.-....|+                                                       
T Consensus        77 ~vVte~a~g-~L~~il~~d~~lpEe-------------------------------------------------------  100 (808)
T KOG0597|consen   77 WVVTEYAVG-DLFTILEQDGKLPEE-------------------------------------------------------  100 (808)
T ss_pred             EEEehhhhh-hHHHHHHhccCCCHH-------------------------------------------------------
Confidence            999999999 876555432222221                                                       


Q ss_pred             CCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcchhh
Q psy5279         753 NVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVIR  832 (1310)
Q Consensus       753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  832 (1310)
                                                                                                      
T Consensus       101 --------------------------------------------------------------------------------  100 (808)
T KOG0597|consen  101 --------------------------------------------------------------------------------  100 (808)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEE
Q psy5279         833 ERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLE  912 (1310)
Q Consensus       833 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~  912 (1310)
                                                                                                      
T Consensus       101 --------------------------------------------------------------------------------  100 (808)
T KOG0597|consen  101 --------------------------------------------------------------------------------  100 (808)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEee
Q psy5279         913 MKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDL  992 (1310)
Q Consensus       913 ~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DF  992 (1310)
                                                        .++-+..|++.||.|||+.+|+|||+||.|||++.  .+.+|+|||
T Consensus       101 ----------------------------------~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~--~~~~KlcdF  144 (808)
T KOG0597|consen  101 ----------------------------------QVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEK--GGTLKLCDF  144 (808)
T ss_pred             ----------------------------------HHHHHHHHHHHHHHHHHhcCcccccCCcceeeecC--CCceeechh
Confidence                                              23445679999999999999999999999999985  567999999


Q ss_pred             ccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccc
Q psy5279         993 GCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF 1072 (1310)
Q Consensus       993 GlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~ 1072 (1310)
                      |+|+.++. ++.......|||.|||||++.+++|+..+|.||+|||+|||.+|++||...+..++.+.|.....+.|   
T Consensus       145 g~Ar~m~~-~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p---  220 (808)
T KOG0597|consen  145 GLARAMST-NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP---  220 (808)
T ss_pred             hhhhhccc-CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc---
Confidence            99988765 33334445789999999999999999999999999999999999999999888888888877666655   


Q ss_pred             hhccHHHHHHHHHhc-cCCcchhcHHhhhCCCcccccc
Q psy5279        1073 KELTQEATRFLMLIF-KHEVDWITLANNIDHEFWHVKD 1109 (1310)
Q Consensus      1073 ~~lS~eakdLL~~il-~~~~~rit~~e~L~H~f~~~~~ 1109 (1310)
                      ..+|...+.||..+| ++|..|++-.+.+.|+||..+.
T Consensus       221 ~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~  258 (808)
T KOG0597|consen  221 STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKI  258 (808)
T ss_pred             ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence            488999999999877 5777899999999999997654

>KOG0598|consensus

Probab=100.00  E-value=3.5e-33  Score=315.05  Aligned_cols=234  Identities=20%  Similarity=0.329  Sum_probs=181.9

Q ss_pred             ccccchhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcc
Q psy5279         857 GAADTYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTST  934 (1310)
Q Consensus       857 ~~~~~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l  934 (1310)
                      .-..+||||.|++.  +..+-.+|+.+|..|.+.  -++||+....-.++             .++...++-.|..||.|
T Consensus        48 dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~--v~hPFiv~l~ysFQ-------------t~~kLylVld~~~GGeL  112 (357)
T KOG0598|consen   48 DTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSK--IKHPFIVKLIYSFQ-------------TEEKLYLVLDYLNGGEL  112 (357)
T ss_pred             ccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHh--CCCCcEeeeEEecc-------------cCCeEEEEEeccCCccH
Confidence            45678999988855  466778899999988877  45677766555443             22233333334445555


Q ss_pred             ccccc-ccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCC
Q psy5279         935 LCYLP-IVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013 (1310)
Q Consensus       935 ~~~L~-~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp 1013 (1310)
                      ..-|+ .....+..+++++..|+.||.|||++|||||||||||||++.  .++|+|+|||+++.....+.. +...+||+
T Consensus       113 f~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~--~GHi~LtDFgL~k~~~~~~~~-t~tfcGT~  189 (357)
T KOG0598|consen  113 FYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDE--QGHIKLTDFGLCKEDLKDGDA-TRTFCGTP  189 (357)
T ss_pred             HHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecC--CCcEEEeccccchhcccCCCc-cccccCCc
Confidence            54453 455667779999999999999999999999999999999986  567999999999865444333 33467889


Q ss_pred             cccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCc-c
Q psy5279        1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEV-D 1092 (1310)
Q Consensus      1014 ~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~-~ 1092 (1310)
                      .|||||++.+.+|+..+|||||||++|+||+|.+||.+.+..+++++|......++  ...+|.+++++++++++.++ +
T Consensus       190 eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~--p~~ls~~ardll~~LL~rdp~~  267 (357)
T KOG0598|consen  190 EYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLP--PGYLSEEARDLLKKLLKRDPRQ  267 (357)
T ss_pred             cccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCC--CccCCHHHHHHHHHHhccCHHH
Confidence            99999999999999999999999999999999999999999999999987763332  24589999999999987554 5


Q ss_pred             hh----cHHhhhCCCccccccc
Q psy5279        1093 WI----TLANNIDHEFWHVKDL 1110 (1310)
Q Consensus      1093 ri----t~~e~L~H~f~~~~~l 1110 (1310)
                      |.    .+.++-.|+||...+.
T Consensus       268 RLg~~~d~~~ik~HpfF~~inW  289 (357)
T KOG0598|consen  268 RLGGPGDAEEIKRHPFFKGINW  289 (357)
T ss_pred             hcCCCCChHHhhcCcccccCCH
Confidence            53    5677778988876554

>KOG0599|consensus

Probab=100.00  E-value=1.5e-34  Score=313.56  Aligned_cols=229  Identities=23%  Similarity=0.390  Sum_probs=191.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC-----Cc---chHHHHHHHHHHHHhc-CCCCcceEEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-----GN---QYKSLFKNELDIMNQL-CHRNLVRLHDSYE  250 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~-----~~---~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~  250 (1310)
                      .|...|+-.+.||+|..++|.+|.++.||+++|+|+|...     +.   ..++...+|+.||+++ .||+|++|.++|+
T Consensus        14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye   93 (411)
T KOG0599|consen   14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE   93 (411)
T ss_pred             hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence            5667788889999999999999999999999999999632     11   1244567899999998 6999999999999


Q ss_pred             eCCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         251 TKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       251 ~~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      ++..+++|+|+|+.|+||+++...-.++|.+++.+|+|+++|+.|||.++||||||||||||++++  .+|||+|||+|.
T Consensus        94 s~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn--~~i~isDFGFa~  171 (411)
T KOG0599|consen   94 SDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDN--MNIKISDFGFAC  171 (411)
T ss_pred             CcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccc--cceEEeccceee
Confidence            999999999999999999999988889999999999999999999999999999999999999764  589999999999


Q ss_pred             eecCCCCCCCcccchHHHhhh-------------------------------cCCCccccCC----CCCCCCCCCcchhh
Q psy5279         331 RITSFGKLNPLEYDVRYVRQA-------------------------------LRHPWLNFAD----RKPTEDTPKLNTDA  375 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~~~-------------------------------~r~P~l~~~~----~~~~~~~p~~~~~~  375 (1310)
                      .+.++..+..+||||.|+++.                               +++||+.--.    +.-.+..-.+...+
T Consensus       172 ~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~spe  251 (411)
T KOG0599|consen  172 QLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPE  251 (411)
T ss_pred             ccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcc
Confidence            999999999999999987742                               2233321000    00001112334456


Q ss_pred             hhhhcccchhhchhhhhhhcccCCCCCCccCCCcc
Q psy5279         376 LRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSR  410 (1310)
Q Consensus       376 ~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~  410 (1310)
                      +.++.+..+|.++..++-+.++|.|+.+||+|||.
T Consensus       252 Wadis~~~KdLIsrlLqVdp~~Ritake~LaHpff  286 (411)
T KOG0599|consen  252 WADISATVKDLISRLLQVDPTKRITAKEALAHPFF  286 (411)
T ss_pred             hhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence            66777788999999999999999999999999996

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=2.9e-31  Score=330.31  Aligned_cols=166  Identities=25%  Similarity=0.392  Sum_probs=143.9

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .+.|.+.+.||+|+||.||+|.+..+++.||||++.....   .....+.+|+.+++.++||||+++++++...+.+|||
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            3679999999999999999999999999999999975432   2345678899999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-C
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-K  337 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~  337 (1310)
                      |||+.||+|...+...+.+++..++.++.||+.||+|||++|||||||||+|||++.++  .+||+|||+++...... .
T Consensus        83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g--~vkL~DFGls~~~~~~~~~  160 (669)
T cd05610          83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEG--HIKLTDFGLSKVTLNRELN  160 (669)
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCC--CEEEEeCCCCccccCCccc
Confidence            99999999999998777899999999999999999999999999999999999998654  79999999999764332 2


Q ss_pred             CCCcccchHHHh
Q psy5279         338 LNPLEYDVRYVR  349 (1310)
Q Consensus       338 l~~~~~t~~yv~  349 (1310)
                      .....+|+.|++
T Consensus       161 ~~~~~~t~~~~~  172 (669)
T cd05610         161 MMDILTTPSMAK  172 (669)
T ss_pred             ccccccCccccC
Confidence            334455655554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0581|consensus

Probab=99.98  E-value=1e-32  Score=311.48  Aligned_cols=228  Identities=21%  Similarity=0.319  Sum_probs=184.8

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC-CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-eEEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-SFTIIS  259 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~-~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-~lyLVm  259 (1310)
                      .+..+..++||+|..|+||+|+|+.|++.+|+|+|... ....++.+.+|++|++..+||+||++|++|..++ .++|+|
T Consensus        78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m  157 (364)
T KOG0581|consen   78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM  157 (364)
T ss_pred             HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence            34567788999999999999999999999999999543 3345677899999999999999999999999999 499999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      |||.||+|...+...+.++|.....++.||++||.|||+ ++||||||||+|||+++.|  .|||||||.++.+.+. ..
T Consensus       158 EYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG--eVKicDFGVS~~lvnS-~a  234 (364)
T KOG0581|consen  158 EYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG--EVKICDFGVSGILVNS-IA  234 (364)
T ss_pred             hhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC--CEEeccccccHHhhhh-hc
Confidence            999999999999888889999999999999999999995 9999999999999999876  8999999999988765 66


Q ss_pred             CCcccchHHHhhh-------------------------cCCCccccCCCCC---------CCCCCCcchhhhhhhcccch
Q psy5279         339 NPLEYDVRYVRQA-------------------------LRHPWLNFADRKP---------TEDTPKLNTDALRNYYNLYK  384 (1310)
Q Consensus       339 ~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~---------~~~~p~~~~~~~~~~~~~~~  384 (1310)
                      +++.||..|+++.                         ++-|+..-.....         ....|+.-++.  .+...+.
T Consensus       235 ~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~--~fS~ef~  312 (364)
T KOG0581|consen  235 NTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEG--EFSPEFR  312 (364)
T ss_pred             ccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcc--cCCHHHH
Confidence            8899999888753                         1123322100000         00001111111  1234457


Q ss_pred             hhchhhhhhhcccCCCCCCccCCCcceecC
Q psy5279         385 DWYGNAAVRRYYRRRPLNSCYTHPSRMIYP  414 (1310)
Q Consensus       385 D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~  414 (1310)
                      +|+++++.++...|.+++|.+.|||+..+.
T Consensus       313 ~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  313 SFVSCCLRKDPSERPSAKQLLQHPFIKKFE  342 (364)
T ss_pred             HHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence            899999999999999999999999985443

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.98  E-value=2.1e-33  Score=311.86  Aligned_cols=106  Identities=23%  Similarity=0.409  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++...... .......+++.|+|||++.+ ..++
T Consensus       106 ~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~--~~~~kl~DfG~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~  182 (288)
T cd07871         106 KIFMFQLLRGLSYCHKRKILHRDLKPQNLLINE--KGELKLADFGLARAKSVPT-KTYSNEVVTLWYRPPDVLLGSTEYS  182 (288)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEECcCcceeeccCCC-ccccCceecccccChHHhcCCcccC
Confidence            345679999999999999999999999999975  4569999999986543211 11122346789999999876 4688


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++||||+||++|+|++|.+||.+.+..+.
T Consensus       183 ~~~DiwslG~~l~~l~~g~~pf~~~~~~~~  212 (288)
T cd07871         183 TPIDMWGVGCILYEMATGRPMFPGSTVKEE  212 (288)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            999999999999999999999988765443

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0616|consensus

Probab=99.98  E-value=9e-33  Score=303.56  Aligned_cols=227  Identities=18%  Similarity=0.329  Sum_probs=182.4

Q ss_pred             ccchhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcccc
Q psy5279         859 ADTYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLC  936 (1310)
Q Consensus       859 ~~~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~  936 (1310)
                      ...||||.|..+  .+.++++|+..|+.|.+...  +||+.-+.-+             .......-++..|..|+.+..
T Consensus        69 g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~--~PFlv~l~~t-------------~~d~~~lymvmeyv~GGElFS  133 (355)
T KOG0616|consen   69 GNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS--HPFLVKLYGT-------------FKDNSNLYMVMEYVPGGELFS  133 (355)
T ss_pred             CceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc--CceeEEEEEe-------------eccCCeEEEEEeccCCccHHH
Confidence            567899999965  59999999999999888765  4554433322             223333344555667788888


Q ss_pred             ccccc-CCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcc
Q psy5279         937 YLPIV-IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015 (1310)
Q Consensus       937 ~L~~~-i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y 1015 (1310)
                      ++..+ -..+..+++++.||++||+|||+++|++|||||||||++.  .+++||+|||+|+++...  .  ...||||.|
T Consensus       134 ~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~--~G~iKitDFGFAK~v~~r--T--~TlCGTPeY  207 (355)
T KOG0616|consen  134 YLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQ--NGHIKITDFGFAKRVSGR--T--WTLCGTPEY  207 (355)
T ss_pred             HHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeecc--CCcEEEEeccceEEecCc--E--EEecCCccc
Confidence            88653 2344558999999999999999999999999999999986  678999999999987532  2  334678999


Q ss_pred             cccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCc-chh
Q psy5279        1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEV-DWI 1094 (1310)
Q Consensus      1016 ~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~-~ri 1094 (1310)
                      +|||++...+|+.++|+|||||++|||+.|.+||.+.+...++++|....++||.   ..|+++++||.+++..+. .|.
T Consensus       208 LAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~---~fs~~~kdLl~~LL~vD~t~R~  284 (355)
T KOG0616|consen  208 LAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS---YFSSDAKDLLKKLLQVDLTKRF  284 (355)
T ss_pred             cChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc---ccCHHHHHHHHHHHhhhhHhhh
Confidence            9999999999999999999999999999999999999999999999999999985   568999999999887554 442


Q ss_pred             -----cHHhhhCCCcccccc
Q psy5279        1095 -----TLANNIDHEFWHVKD 1109 (1310)
Q Consensus      1095 -----t~~e~L~H~f~~~~~ 1109 (1310)
                           ...++..|+||...+
T Consensus       285 gnlknG~~dIk~H~wF~~v~  304 (355)
T KOG0616|consen  285 GNLKNGVEDIKNHPWFKGVD  304 (355)
T ss_pred             cCcCCCccccccCccccccc
Confidence                 345667788877443

>KOG0033|consensus

Probab=99.98  E-value=2.4e-34  Score=308.54  Aligned_cols=232  Identities=25%  Similarity=0.402  Sum_probs=181.1

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC--CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~--~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .|.+.|++.++||+|.|+.||+|.++.||+.+|+|+|+.+  +....+.+.+|+.|-+.|+|||||+|++.+...+..||
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl   87 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL   87 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence            5889999999999999999999999999999999999643  33466789999999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccceeecCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |+|+|.||+|+.-+..+..++|..+..+++||++||.|||.+||||||+||+|+|+.++. +.-|||+|||+|..+....
T Consensus        88 vFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~  167 (355)
T KOG0033|consen   88 VFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE  167 (355)
T ss_pred             EEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc
Confidence            999999999999888877899999999999999999999999999999999999998654 4579999999999988544


Q ss_pred             CCCCcccchHHHh-------------------------hhcCCCccccCCCCC----CCCCCCcchhhhhhhcccchhhc
Q psy5279         337 KLNPLEYDVRYVR-------------------------QALRHPWLNFADRKP----TEDTPKLNTDALRNYYNLYKDWY  387 (1310)
Q Consensus       337 ~l~~~~~t~~yv~-------------------------~~~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~~D~~  387 (1310)
                      ..-...|||.|++                         +.++.||.+.....-    ....-+++..++..+...++|.+
T Consensus       168 ~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~Lv  247 (355)
T KOG0033|consen  168 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLI  247 (355)
T ss_pred             ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHH
Confidence            4444555665544                         334444443110000    00001112223333444445544


Q ss_pred             hhhhhhhcccCCCCCCccCCCcce
Q psy5279         388 GNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       388 ~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ..-+.-+..+|.|+++.|.|||++
T Consensus       248 rrML~~dP~kRIta~EAL~HpWi~  271 (355)
T KOG0033|consen  248 RRMLTVNPKKRITADEALKHPWIC  271 (355)
T ss_pred             HHHhccChhhhccHHHHhCCchhc
Confidence            444444567899999999999975

>KOG0590|consensus

Probab=99.98  E-value=1e-33  Score=346.90  Aligned_cols=152  Identities=23%  Similarity=0.397  Sum_probs=126.9

Q ss_pred             CCCeeeeceecccCceEEEEEEEc-CCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcC-CCCcceEEEEEEeCCeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVER-SSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLC-HRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k-~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ...|.+.+.||+|+|+.|..+... .+...+|+|.+....  .........|..+-+.+. |+|++++++.....+..++
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            456788888999999999988763 445567778775443  222334456888888887 9999999999999999999


Q ss_pred             EEecCCCCchHHHh-hhcC-CCCHHHHHHHHHHHHHHHHHhh-hCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         258 ISELAGGGELLHSL-TRQS-YYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       258 VmEy~~GGeL~~~l-~~~~-~lsE~~i~~ii~QIl~GL~YLH-s~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++||..||+++..+ .... ..+...+..++.|+..|+.|+| ..++.|||+||+|.+++..+. .+|++|||+|..+..
T Consensus        99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~-~l~~~df~~At~~~~  177 (601)
T KOG0590|consen   99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGS-ALKIADFGLATAYRN  177 (601)
T ss_pred             ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCC-cccCCCchhhccccc
Confidence            99999999999999 5554 6888899999999999999999 999999999999999986553 799999999988765

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.98  E-value=1.1e-32  Score=303.74  Aligned_cols=106  Identities=22%  Similarity=0.404  Sum_probs=87.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++...............|++.|+|||++.+..++.
T Consensus       103 ~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  180 (287)
T cd07848         103 RSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH--NDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGK  180 (287)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCC
Confidence            345679999999999999999999999999975  457999999998765432222222235678999999999989999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++|+|||||++|+|++|.+||.+.+..+
T Consensus       181 ~~DiwslGvil~el~~g~~pf~~~~~~~  208 (287)
T cd07848         181 AVDMWSVGCILGELSDGQPLFPGESEID  208 (287)
T ss_pred             chhHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence            9999999999999999999998876544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0581|consensus

Probab=99.98  E-value=4.5e-33  Score=314.27  Aligned_cols=99  Identities=28%  Similarity=0.478  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||. ++||||||||+|||+++  .++|||||||.++.+...   ....++||..|||||.+.+..|+
T Consensus       181 ~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs--kGeVKicDFGVS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys  255 (364)
T KOG0581|consen  181 GKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS--KGEVKICDFGVSGILVNS---IANTFVGTSAYMSPERISGESYS  255 (364)
T ss_pred             HHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc--CCCEEeccccccHHhhhh---hcccccccccccChhhhcCCcCC
Confidence            4457799999999995 99999999999999987  567999999999876432   23445788999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++||||||+.+.||..|+.||...
T Consensus       256 ~~sDIWSLGLsllE~a~GrfP~~~~  280 (364)
T KOG0581|consen  256 VKSDIWSLGLSLLELAIGRFPYPPP  280 (364)
T ss_pred             cccceecccHHHHHHhhCCCCCCCc
Confidence            9999999999999999999999653

>KOG0588|consensus

Probab=99.98  E-value=2.8e-32  Score=322.39  Aligned_cols=167  Identities=29%  Similarity=0.477  Sum_probs=155.8

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      -..|++++.||.|+-|.|.+|++..||+..|||+|.+..   ......+.+||.||+-|.|||+++|+++++....+|+|
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv   90 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV   90 (786)
T ss_pred             ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence            356899999999999999999999999999999998762   23455688999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      +||++||+||+++.+++.++|.+++.|++||+.|+.|||..+|+||||||||+||+.++  .|||+|||+|..-.++..+
T Consensus        91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~--nIKIADFGMAsLe~~gklL  168 (786)
T KOG0588|consen   91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN--NIKIADFGMASLEVPGKLL  168 (786)
T ss_pred             EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc--CEeeeccceeecccCCccc
Confidence            99999999999999999999999999999999999999999999999999999999776  4999999999998888899


Q ss_pred             CCcccchHHHhh
Q psy5279         339 NPLEYDVRYVRQ  350 (1310)
Q Consensus       339 ~~~~~t~~yv~~  350 (1310)
                      .+-||.|-|+++
T Consensus       169 eTSCGSPHYA~P  180 (786)
T KOG0588|consen  169 ETSCGSPHYAAP  180 (786)
T ss_pred             cccCCCcccCCc
Confidence            999999988764

>KOG0611|consensus

Probab=99.97  E-value=8.8e-33  Score=310.83  Aligned_cols=203  Identities=26%  Similarity=0.447  Sum_probs=174.4

Q ss_pred             cCccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe
Q psy5279         178 TKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       178 ~~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~  254 (1310)
                      .....-+|++.+.||+|.||+|.+|.+...|+.||||.|++...   ++.-.++|||+||..|+||||++++++|+..+.
T Consensus        48 khnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdK  127 (668)
T KOG0611|consen   48 KHNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDK  127 (668)
T ss_pred             ccchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCce
Confidence            34677899999999999999999999999999999999976543   334457899999999999999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         255 FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +.|||||..+|+|.+++...+.++|.+++.+++||.+|+.|||.++++|||||.+|||++.++  .+||+||||+..+..
T Consensus       128 IvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~--NiKIADFGLSNly~~  205 (668)
T KOG0611|consen  128 IVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNN--NIKIADFGLSNLYAD  205 (668)
T ss_pred             EEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCC--Ceeeeccchhhhhcc
Confidence            999999999999999999999999999999999999999999999999999999999998765  799999999999998


Q ss_pred             CCCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCC
Q psy5279         335 FGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNS  403 (1310)
Q Consensus       335 ~~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~  403 (1310)
                      ...++++||+|.|+     +|++--+.       |+..+         -.| | .|.++.......||.|.
T Consensus       206 ~kfLqTFCGSPLYA-----SPEIvNG~-------PY~GP---------EVDsWsLGvLLYtLVyGtMPFDG  255 (668)
T KOG0611|consen  206 KKFLQTFCGSPLYA-----SPEIVNGT-------PYKGP---------EVDSWSLGVLLYTLVYGTMPFDG  255 (668)
T ss_pred             ccHHHHhcCCcccC-----CccccCCC-------CCCCC---------ccchhhHHHHHHHHhhcccccCC
Confidence            89999999998876     46654332       22111         234 5 55666666667777766

>KOG0594|consensus

Probab=99.97  E-value=4.2e-32  Score=305.72  Aligned_cols=175  Identities=29%  Similarity=0.426  Sum_probs=150.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCC-cceEEEEEEeCC-----
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRN-LVRLHDSYETKD-----  253 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPN-IVkL~d~f~~~~-----  253 (1310)
                      ...|+..++||+|+||+||+|+.+.+|+.||+|++.....  .......||+.+|+.|+|+| ||.|++++.+.+     
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            3457788889999999999999999999999999976543  34556789999999999999 999999999988     


Q ss_pred             -eEEEEEecCCCCchHHHhhhcC----CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecc
Q psy5279         254 -SFTIISELAGGGELLHSLTRQS----YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL  328 (1310)
Q Consensus       254 -~lyLVmEy~~GGeL~~~l~~~~----~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGL  328 (1310)
                       .+|||+||+.. +|-..+....    .++...++.+++||+.||+|||++||+||||||+||||++++  .+||+|||+
T Consensus        90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G--~lKlaDFGl  166 (323)
T KOG0594|consen   90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSG--VLKLADFGL  166 (323)
T ss_pred             ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCC--cEeeeccch
Confidence             89999999985 6666664433    577789999999999999999999999999999999998755  899999999


Q ss_pred             ceeecCCCCCCCcccchHHHhhhcCCCccccCCCC
Q psy5279         329 SRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRK  363 (1310)
Q Consensus       329 Ar~i~~~~~l~~~~~t~~yv~~~~r~P~l~~~~~~  363 (1310)
                      |+...-+    ..++|++.+|+|||+|+++++...
T Consensus       167 Ara~~ip----~~~yt~evvTlWYRaPEvLlGs~~  197 (323)
T KOG0594|consen  167 ARAFSIP----MRTYTPEVVTLWYRAPEVLLGSTS  197 (323)
T ss_pred             HHHhcCC----cccccccEEEeeccCHHHhcCCCc
Confidence            9966432    234788889999999999888643

>KOG0592|consensus

Probab=99.97  E-value=3e-32  Score=317.32  Aligned_cols=233  Identities=19%  Similarity=0.322  Sum_probs=175.8

Q ss_pred             cCCCchhhHhHHHHHhhhcCCCCCceeecceeeee-eeCCEEEEEE-eccCCCcceeeecccCCccccccccc-CCCchh
Q psy5279         871 IGTRPEAHVEADALIESRRDGHAPFFREKPITIPV-VIGDKLEMKC-LAVGEPKPVIQWFKLGTSTLCYLPIV-IPTTHK  947 (1310)
Q Consensus       871 ~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l-~~g~~l~~~~-l~~G~p~~vi~~f~~g~~l~~~L~~~-i~~~~~  947 (1310)
                      .+..|++.+.++.+|.+++..++  -||+..|..+ .|+.++.+.+ .++......+-.|..+|+++.+|... -..+..
T Consensus        98 ~keYAiKVl~K~~Iike~KvkYV--~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~c  175 (604)
T KOG0592|consen   98 GKEYAIKVLDKRYIIKEKKVKYV--TREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETC  175 (604)
T ss_pred             CceeeHhhhhHHHHHhhcccchh--hHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHH
Confidence            34444444444555544444433  3444444444 4444554444 34444444444455566666666433 344556


Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc----------ccc--cCCCCCCcc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT----------LIH--PINTPNPEF 1015 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~----------~~~--~~~tGtp~Y 1015 (1310)
                      ++|++.||++||+|||++|||||||||||||++.  ++++||+|||.|+.+.+...          ...  ..+.||..|
T Consensus       176 aR~YAAeIldAleylH~~GIIHRDlKPENILLd~--dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeY  253 (604)
T KOG0592|consen  176 ARFYAAEILDALEYLHSNGIIHRDLKPENILLDK--DGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEY  253 (604)
T ss_pred             HHHHHHHHHHHHHHHHhcCceeccCChhheeEcC--CCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecc
Confidence            8999999999999999999999999999999986  67899999999987643211          111  346789999


Q ss_pred             cccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchh
Q psy5279        1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWI 1094 (1310)
Q Consensus      1016 ~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~ri 1094 (1310)
                      ++||++.....+..+|+|+||||||+|+.|.+||.+.++-.++++|....|.|+.   ..++.+++|+.+||. ++.+|+
T Consensus       254 VSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~---~fp~~a~dLv~KLLv~dp~~Rl  330 (604)
T KOG0592|consen  254 VSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPE---GFPEDARDLIKKLLVRDPSDRL  330 (604)
T ss_pred             cCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCC---CCCHHHHHHHHHHHccCccccc
Confidence            9999999999999999999999999999999999999999999999999999986   456899999999886 677899


Q ss_pred             cHHhhhCCCccccccc
Q psy5279        1095 TLANNIDHEFWHVKDL 1110 (1310)
Q Consensus      1095 t~~e~L~H~f~~~~~l 1110 (1310)
                      ++.++..|+||...+.
T Consensus       331 t~~qIk~HpFF~~Vdw  346 (604)
T KOG0592|consen  331 TSQQIKAHPFFEGVDW  346 (604)
T ss_pred             cHHHHhhCcccccCCh
Confidence            9999999999987554

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=1.6e-32  Score=309.23  Aligned_cols=105  Identities=21%  Similarity=0.434  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccC--C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAE--E 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~--~ 1024 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.......  .......|++.|+|||++.+  .
T Consensus       106 ~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  183 (338)
T cd07859         106 QFFLYQLLRALKYIHTANVFHRDLKPKNILANA--DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFS  183 (338)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhcccc
Confidence            345679999999999999999999999999975  56799999999875422111  11122357899999999876  5


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      .++.++|||||||++|+|++|.+||.+.+..
T Consensus       184 ~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~  214 (338)
T cd07859         184 KYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV  214 (338)
T ss_pred             ccCchhHHHHHHHHHHHHHcCCCCCCCCChH
Confidence            7889999999999999999999999876543

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0585|consensus

Probab=99.97  E-value=7.7e-33  Score=317.81  Aligned_cols=164  Identities=24%  Similarity=0.415  Sum_probs=134.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccC----CcccccCCCCCCcccccccc
Q psy5279         946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL----GTLIHPINTPNPEFAAPEVL 1021 (1310)
Q Consensus       946 ~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~----g~~~~~~~tGtp~Y~APEvl 1021 (1310)
                      ..++.+++.++.||+|||.+|||||||||.|+||++  +++|||+|||.+......    ....-....|||.|||||.+
T Consensus       210 ~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~--~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c  287 (576)
T KOG0585|consen  210 QQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSS--DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELC  287 (576)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcC--CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhh
Confidence            346778899999999999999999999999999986  478999999988654211    11111124688999999876


Q ss_pred             cCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhC
Q psy5279        1022 AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNID 1101 (1310)
Q Consensus      1022 ~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~ 1101 (1310)
                      .++.-                      |                                                    
T Consensus       288 ~~~~~----------------------~----------------------------------------------------  293 (576)
T KOG0585|consen  288 SGGNS----------------------F----------------------------------------------------  293 (576)
T ss_pred             cCCCC----------------------c----------------------------------------------------
Confidence            54210                      0                                                    


Q ss_pred             CCcccccccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCCh
Q psy5279        1102 HEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1181 (1310)
Q Consensus      1102 H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~ 1181 (1310)
                                                                       --.+.+.||||+||.+|.||.|..||.++..
T Consensus       294 -------------------------------------------------~~~g~a~DiWalGVTLYCllfG~~PF~~~~~  324 (576)
T KOG0585|consen  294 -------------------------------------------------SYSGFALDIWALGVTLYCLLFGQLPFFDDFE  324 (576)
T ss_pred             -------------------------------------------------cccchhhhhhhhhhhHHHhhhccCCcccchH
Confidence                                                             0034567999999999999999999999999


Q ss_pred             hhhhhcccccccccccchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCC
Q psy5279        1182 PETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235 (1310)
Q Consensus      1182 ~e~~~~I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~ 1235 (1310)
                      .+++..|....+.||.. .++++++||+|.+||.+||.+|+|+.++..|||+..
T Consensus       325 ~~l~~KIvn~pL~fP~~-pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~  377 (576)
T KOG0585|consen  325 LELFDKIVNDPLEFPEN-PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR  377 (576)
T ss_pred             HHHHHHHhcCcccCCCc-ccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence            99999999999999854 479999999999999999999999999999999943

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=1.2e-32  Score=312.92  Aligned_cols=98  Identities=26%  Similarity=0.513  Sum_probs=84.3

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++......    ....|++.|+|||++.+..++.+
T Consensus       122 ~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~  195 (329)
T PTZ00263        122 FYHAELVLAFEYLHSKDIIYRDLKPENLLLDN--KGHVKVTDFGFAKKVPDRT----FTLCGTPEYLAPEVIQSKGHGKA  195 (329)
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCCHHHEEECC--CCCEEEeeccCceEcCCCc----ceecCChhhcCHHHHcCCCCCCc
Confidence            34569999999999999999999999999985  4579999999987654321    12357799999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +|||||||++|+|++|..||.+.+
T Consensus       196 ~DiwslG~il~elltg~~pf~~~~  219 (329)
T PTZ00263        196 VDWWTMGVLLYEFIAGYPPFFDDT  219 (329)
T ss_pred             ceeechHHHHHHHHcCCCCCCCCC
Confidence            999999999999999999997654

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.97  E-value=4.5e-32  Score=299.23  Aligned_cols=105  Identities=27%  Similarity=0.422  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++.......  ......|++.|+|||++.+..++.
T Consensus       113 ~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~  188 (290)
T cd07862         113 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYAT  188 (290)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcC--CCCEEEccccceEeccCCc--ccccccccccccChHHHhCCCCCC
Confidence            345679999999999999999999999999975  4579999999987654321  122335679999999999989999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ++|||||||++|+|++|.+||.+.+..+.
T Consensus       189 ~~DiwslG~il~el~~g~~~f~~~~~~~~  217 (290)
T cd07862         189 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQ  217 (290)
T ss_pred             ccchHHHHHHHHHHHcCCCCcCCCCHHHH
Confidence            99999999999999999999998765544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0585|consensus

Probab=99.97  E-value=1.9e-31  Score=306.38  Aligned_cols=238  Identities=22%  Similarity=0.323  Sum_probs=177.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--------------chHHHHHHHHHHHHhcCCCCcceE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--------------QYKSLFKNELDIMNQLCHRNLVRL  245 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--------------~~~~~~~rEI~IL~~L~HPNIVkL  245 (1310)
                      ..-+.|++.++||+|.||+|.+|++..+++.||||++.++..              ...+.+.+||.||++|+|||||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            345779999999999999999999999999999999975321              123568899999999999999999


Q ss_pred             EEEEEeC--CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEE
Q psy5279         246 HDSYETK--DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL  323 (1310)
Q Consensus       246 ~d~f~~~--~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKL  323 (1310)
                      +++..++  +.+|||+|||..|++...-....-+++.+++.|++++..||+|||.+|||||||||+|+||++++  +|||
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g--~VKI  251 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDG--TVKI  251 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCC--cEEe
Confidence            9999876  57999999999999977655443399999999999999999999999999999999999998775  8999


Q ss_pred             EeeccceeecCC------CCCCCcccchHHHhhhcCCC-----ccccC---------------CCCCCCCCCCcchhhhh
Q psy5279         324 TDFGLSRRITSF------GKLNPLEYDVRYVRQALRHP-----WLNFA---------------DRKPTEDTPKLNTDALR  377 (1310)
Q Consensus       324 sDFGLAr~i~~~------~~l~~~~~t~~yv~~~~r~P-----~l~~~---------------~~~~~~~~p~~~~~~~~  377 (1310)
                      +|||.+-.....      ..+..-.|||.|.++..++.     +.+++               ...|.+  ..+..+.+.
T Consensus       252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~--~~~~~~l~~  329 (576)
T KOG0585|consen  252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFF--DDFELELFD  329 (576)
T ss_pred             eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcc--cchHHHHHH
Confidence            999999765221      12333456766665543332     11111               001100  111111111


Q ss_pred             -------------hhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCCCCCCC
Q psy5279         378 -------------NYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTP  421 (1310)
Q Consensus       378 -------------~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~~~tp  421 (1310)
                                   +++..++|.+-..+-++...|+++.++-.|||++.-....+.+.
T Consensus       330 KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~~~~s~  386 (576)
T KOG0585|consen  330 KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGDSPQSSE  386 (576)
T ss_pred             HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCCCCCccCC
Confidence                         23445577777777778899999999999999976544334443

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=2.3e-32  Score=309.40  Aligned_cols=102  Identities=25%  Similarity=0.455  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+. ......|++.|+|||++.+..++.
T Consensus        98 ~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~--~~~~kl~DfG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  174 (323)
T cd05571          98 RFYGAEIVSALGYLHSCDVVYRDLKLENLMLDK--DGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGR  174 (323)
T ss_pred             HHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC--CCCEEEeeCCCCcccccCCC-cccceecCccccChhhhcCCCCCc
Confidence            344569999999999999999999999999975  45699999999875322221 112235789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|||||||++|+|++|..||.+.+
T Consensus       175 ~~DiwSlG~il~elltg~~Pf~~~~  199 (323)
T cd05571         175 AVDWWGLGVVMYEMMCGRLPFYNQD  199 (323)
T ss_pred             cccCcccchhhhhhhcCCCCCCCCC
Confidence            9999999999999999999997654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.97  E-value=5e-32  Score=302.51  Aligned_cols=102  Identities=22%  Similarity=0.425  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  .+.+||+|||++........ ......+++.|+|||++.+. .++
T Consensus       106 ~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  182 (303)
T cd07869         106 KLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD--TGELKLADFGLARAKSVPSH-TYSNEVVTLWYRPPDVLLGSTEYS  182 (303)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECCCCcceeccCCCc-cCCCCcccCCCCChHHHcCCCCCC
Confidence            445779999999999999999999999999975  45699999999865432111 11223567899999998764 578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      .++|||||||++|+|++|..||.+..
T Consensus       183 ~~~DiwslG~il~~l~~g~~pf~~~~  208 (303)
T cd07869         183 TCLDMWGVGCIFVEMIQGVAAFPGMK  208 (303)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence            89999999999999999999998753

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.97  E-value=2e-31  Score=307.48  Aligned_cols=107  Identities=26%  Similarity=0.413  Sum_probs=87.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++...............+++.|+|||++.+. .++
T Consensus       106 ~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~--~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  183 (372)
T cd07853         106 KVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS--NCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYT  183 (372)
T ss_pred             HHHHHHHHHHHHHHHhCCeeCCCCChHHEEECC--CCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCC
Confidence            445679999999999999999999999999985  56799999999876533222222223467899999999875 478


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++||||+||++|+|++|..||.+.+....
T Consensus       184 ~~~DiwslG~il~el~~g~~pf~~~~~~~~  213 (372)
T cd07853         184 SAVDIWSVGCIFAELLGRRILFQAQSPIQQ  213 (372)
T ss_pred             cHHHHHhHHHHHHHHHcCCCCCCCCCHHHH
Confidence            899999999999999999999988765443

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0694|consensus

Probab=99.97  E-value=6.1e-32  Score=321.93  Aligned_cols=268  Identities=20%  Similarity=0.324  Sum_probs=209.5

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcC-CCCcceEEEEEEeCCeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLC-HRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .+.|.+.++||+|+||+|+++..+.|++.||||++++..-   ...+..+.|-.|+.... ||.+++|+.+|++++++|+
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f  446 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF  446 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence            4789999999999999999999999999999999987532   34556778888887774 9999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec-CCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT-SFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~-~~~  336 (1310)
                      ||||+.||+++ .+...+.|+|..++.|++.|+.||+|||++||||||||.+||||+.+|  ++||+||||+|.-. ...
T Consensus       447 vmey~~Ggdm~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG--h~kiADFGlcKe~m~~g~  523 (694)
T KOG0694|consen  447 VMEYVAGGDLM-HHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG--HVKIADFGLCKEGMGQGD  523 (694)
T ss_pred             EEEecCCCcEE-EEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC--cEEecccccccccCCCCC
Confidence            99999999954 444556799999999999999999999999999999999999999877  99999999999765 444


Q ss_pred             CCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCC
Q psy5279         337 KLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPG  416 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~  416 (1310)
                      ...++||||.|++     |+++              .+   .-|+.+.|||+.             .+|.+.++.+-+|+
T Consensus       524 ~TsTfCGTpey~a-----PEil--------------~e---~~Yt~aVDWW~l-------------GVLlyeML~Gq~PF  568 (694)
T KOG0694|consen  524 RTSTFCGTPEFLA-----PEVL--------------TE---QSYTRAVDWWGL-------------GVLLYEMLVGESPF  568 (694)
T ss_pred             ccccccCChhhcC-----hhhh--------------cc---CcccchhhHHHH-------------HHHHHHHHcCCCCC
Confidence            6778999999986     4443              12   238889999998             78888898888898


Q ss_pred             CCCCCCCCCcceecccccccccccccccCCCCCCCcc-cccCCCCCCCCc--hhhHHHHhccCCCHHHHHHHHHHHHHHh
Q psy5279         417 TQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKT-WEDNVPNRGPGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGL  493 (1310)
Q Consensus       417 ~~~tp~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~-~~d~v~e~~~~~--el~~~~~~~~~~~e~~~~~~~~qi~~~~  493 (1310)
                      .+..-+...+.| ++.+-+    -+-.+++.+-+|.. ++..+|+++-|-  -=.+-|+++-+|-+=+            
T Consensus       569 ~gddEee~FdsI-~~d~~~----yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~------------  631 (694)
T KOG0694|consen  569 PGDDEEEVFDSI-VNDEVR----YPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID------------  631 (694)
T ss_pred             CCCCHHHHHHHH-hcCCCC----CCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCC------------
Confidence            888766666665 444443    33344555534433 337788877663  1134455555443322            


Q ss_pred             hhhccCCceecCCCC
Q psy5279         494 DYMHRLSIAHLGLTP  508 (1310)
Q Consensus       494 ~y~H~~~i~hrDlkp  508 (1310)
                       |   ..+.+|++||
T Consensus       632 -w---~~L~~r~i~P  642 (694)
T KOG0694|consen  632 -W---DDLLNRRIKP  642 (694)
T ss_pred             -H---HHHhhccCCC
Confidence             1   1256899999

>KOG0580|consensus

Probab=99.97  E-value=2.7e-32  Score=293.07  Aligned_cols=152  Identities=24%  Similarity=0.471  Sum_probs=127.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      +.+++|++.||.|||.++||||||||+|+|++.  .+.+|++|||.+.... .+..  .+.|||..|.+||..       
T Consensus       127 a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~--~~~lkiAdfGwsV~~p-~~kR--~tlcgt~dyl~pEmv-------  194 (281)
T KOG0580|consen  127 ATYIKQLANALLYCHLKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAP-SNKR--KTLCGTLDYLPPEMV-------  194 (281)
T ss_pred             hHHHHHHHHHHHHhccCCcccCCCCHHHhccCC--CCCeeccCCCceeecC-CCCc--eeeecccccCCHhhc-------
Confidence            445679999999999999999999999999987  4569999999886543 2322  233455666666543       


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCccccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVK 1108 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~ 1108 (1310)
                                                                                                      
T Consensus       195 --------------------------------------------------------------------------------  194 (281)
T KOG0580|consen  195 --------------------------------------------------------------------------------  194 (281)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcc
Q psy5279        1109 DLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1188 (1310)
Q Consensus      1109 ~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I 1188 (1310)
                                                              ...+++..||+|++||++|++|+|.+||...+..++++.|
T Consensus       195 ----------------------------------------~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI  234 (281)
T KOG0580|consen  195 ----------------------------------------EGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRI  234 (281)
T ss_pred             ----------------------------------------CCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHH
Confidence                                                    3445677889999999999999999999999999999999


Q ss_pred             cccccccccchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCC
Q psy5279        1189 NFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235 (1310)
Q Consensus      1189 ~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~ 1235 (1310)
                      ...++.||   ..||.+|+|||++||+++|.+|++..|+++|||+..
T Consensus       235 ~k~~~~~p---~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  235 RKVDLKFP---STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             HHccccCC---cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence            99999988   689999999999999999999999999999999864

>KOG0660|consensus

Probab=99.97  E-value=1e-31  Score=302.27  Aligned_cols=112  Identities=23%  Similarity=0.443  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAE-EP 1025 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~-~~ 1025 (1310)
                      ..|++.||+.||.|+|+.||+||||||.|+|++.  ++.+||||||+|+....... ...+-..-|.+|+|||++.. ..
T Consensus       127 ~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~--~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~  204 (359)
T KOG0660|consen  127 AQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNA--DCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSE  204 (359)
T ss_pred             HHHHHHHHHHhcchhhcccccccccchhheeecc--CCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhcccc
Confidence            5788899999999999999999999999999986  56799999999987653211 11122234689999999865 47


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhh
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I 1061 (1310)
                      |+...||||+|||+.|||+|++-|.|.+.-...+.|
T Consensus       205 Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI  240 (359)
T KOG0660|consen  205 YTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLI  240 (359)
T ss_pred             ccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHH
Confidence            999999999999999999999999998766554443

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.97  E-value=4.3e-32  Score=311.11  Aligned_cols=100  Identities=22%  Similarity=0.440  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++......    ....||+.|||||++.+..++.
T Consensus       134 ~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~--~~~ikL~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~  207 (340)
T PTZ00426        134 CFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDK--DGFIKMTDFGFAKVVDTRT----YTLCGTPEYIAPEILLNVGHGK  207 (340)
T ss_pred             HHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC--CCCEEEecCCCCeecCCCc----ceecCChhhcCHHHHhCCCCCc
Confidence            345679999999999999999999999999975  5679999999987653211    2235789999999999989999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|||||||++|+|++|.+||.+.+.
T Consensus       208 ~~DiwSlGvil~ell~G~~Pf~~~~~  233 (340)
T PTZ00426        208 AADWWTLGIFIYEILVGCPPFYANEP  233 (340)
T ss_pred             cccccchhhHHHHHhcCCCCCCCCCH
Confidence            99999999999999999999976543

>KOG0578|consensus

Probab=99.97  E-value=4e-31  Score=310.19  Aligned_cols=103  Identities=30%  Similarity=0.603  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .+.++++++.||+|||.+||+|||||.+|||++.  ++.|||+|||++.++..... ....-.|||+|||||++....|+
T Consensus       371 IA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~--~g~vKltDFGFcaqi~~~~~-KR~TmVGTPYWMAPEVvtrk~YG  447 (550)
T KOG0578|consen  371 IAAICREILQGLKFLHARGIIHRDIKSDNILLTM--DGSVKLTDFGFCAQISEEQS-KRSTMVGTPYWMAPEVVTRKPYG  447 (550)
T ss_pred             HHHHHHHHHHHHHHHHhcceeeeccccceeEecc--CCcEEEeeeeeeeccccccC-ccccccCCCCccchhhhhhcccC
Confidence            5667889999999999999999999999999986  44599999999988765443 33445789999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +++||||||++++||+-|++||...+
T Consensus       448 ~KVDIWSLGIMaIEMveGEPPYlnE~  473 (550)
T KOG0578|consen  448 PKVDIWSLGIMAIEMVEGEPPYLNEN  473 (550)
T ss_pred             ccccchhhhhHHHHHhcCCCCccCCC
Confidence            99999999999999999999997543

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=9.8e-32  Score=302.54  Aligned_cols=101  Identities=26%  Similarity=0.441  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++....... ......||+.|+|||++.+..++.+
T Consensus        97 ~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~  173 (312)
T cd05585          97 FYTAELLCALENLHKFNVIYRDLKPENILLDY--QGHIALCDFGLCKLNMKDDD-KTNTFCGTPEYLAPELLLGHGYTKA  173 (312)
T ss_pred             HHHHHHHHHHHHHHhCCeEeCCCCHHHeEECC--CCcEEEEECcccccCccCCC-ccccccCCcccCCHHHHcCCCCCCc
Confidence            34569999999999999999999999999975  45799999999875322211 1223457899999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +|||||||++|+|++|..||.+.+
T Consensus       174 ~DvwslGvil~el~tg~~pf~~~~  197 (312)
T cd05585         174 VDWWTLGVLLYEMLTGLPPFYDEN  197 (312)
T ss_pred             cceechhHHHHHHHhCCCCcCCCC
Confidence            999999999999999999997654

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0660|consensus

Probab=99.97  E-value=2.6e-31  Score=299.07  Aligned_cols=176  Identities=25%  Similarity=0.395  Sum_probs=146.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEec--CCcchHHHHHHHHHHHHhcCCCCcceEEEEEEe-----C
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDSYET-----K  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~--~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~-----~  252 (1310)
                      .+..+|...+.||+|+||.|+.|.++.||+.||||.|..  ......+...||+.+|+.++|+|||.+++++..     -
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f   98 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF   98 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence            345667778999999999999999999999999999863  233344557799999999999999999999976     3


Q ss_pred             CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         253 DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      +.+|+|+|+|+ .+|...+..+..+++..++.+++||+.||+|+|+.||+||||||.|+|++.+.  .+|||||||||..
T Consensus        99 ~DvYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c--~lKI~DFGLAR~~  175 (359)
T KOG0660|consen   99 NDVYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADC--DLKICDFGLARYL  175 (359)
T ss_pred             ceeEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCC--CEEeccccceeec
Confidence            57999999994 47777776665699999999999999999999999999999999999998655  7899999999998


Q ss_pred             cCCCCCCCcccchHHHhhhcCCCccccC
Q psy5279         333 TSFGKLNPLEYDVRYVRQALRHPWLNFA  360 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv~~~~r~P~l~~~  360 (1310)
                      .+.  -.....|--.+|.|||+|++.++
T Consensus       176 ~~~--~~~~~mTeYVaTRWYRAPElll~  201 (359)
T KOG0660|consen  176 DKF--FEDGFMTEYVATRWYRAPELLLN  201 (359)
T ss_pred             ccc--CcccchhcceeeeeecCHHHHhc
Confidence            653  11112233347899999998777

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.97  E-value=2.9e-31  Score=304.92  Aligned_cols=106  Identities=24%  Similarity=0.432  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||+|||++||+||||||+|||++.  +..+||+|||+++......  ......+++.|+|||++.+..++.+
T Consensus       130 ~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~DfG~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~  205 (364)
T cd07875         130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKEN  205 (364)
T ss_pred             HHHHHHHHHHHHHhhCCeecCCCCHHHEEECC--CCcEEEEeCCCccccCCCC--cccCCcccCCcCCHHHHhCCCCCch
Confidence            45679999999999999999999999999975  4579999999987543221  1122356799999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      +|||||||++|+|++|..||.+.+..+...
T Consensus       206 ~DiwSlG~il~ell~g~~pf~~~~~~~~~~  235 (364)
T cd07875         206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWN  235 (364)
T ss_pred             hhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            999999999999999999999877655433

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG4717|consensus

Probab=99.97  E-value=1.7e-31  Score=306.62  Aligned_cols=210  Identities=22%  Similarity=0.356  Sum_probs=177.2

Q ss_pred             CceeecceeeeeeeCCEEEEE-EeccCCCcceeeecccCCcccccccc--cCCCchhHHHHHHHHHHHHHHHHHCCceec
Q psy5279         894 PFFREKPITIPVVIGDKLEMK-CLAVGEPKPVIQWFKLGTSTLCYLPI--VIPTTHKDAYCVTSVLDGLQYLHWRGLCHL  970 (1310)
Q Consensus       894 ~ffrE~~~~~~l~~g~~l~~~-~l~~G~p~~vi~~f~~g~~l~~~L~~--~i~~~~~~~~i~~QIl~AL~yLHs~gIVHR  970 (1310)
                      -.|.|++.|.-|.|++++.+. .+.......++-.+-.++.++.|+-.  .-..+..+.-+|+||+.|+.|||+..+|||
T Consensus        63 hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHR  142 (864)
T KOG4717|consen   63 HLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHR  142 (864)
T ss_pred             HHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcc
Confidence            469999999999999999654 45556666778888888888888732  234566788899999999999999999999


Q ss_pred             ccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCC
Q psy5279         971 NIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus       971 DLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      ||||||+++-.. -+-|||.|||++-.+.+.....+.|  |+..|.|||++.+..|+                       
T Consensus       143 DLKPENVVFFEK-lGlVKLTDFGFSNkf~PG~kL~TsC--GSLAYSAPEILLGDsYD-----------------------  196 (864)
T KOG4717|consen  143 DLKPENVVFFEK-LGLVKLTDFGFSNKFQPGKKLTTSC--GSLAYSAPEILLGDSYD-----------------------  196 (864)
T ss_pred             cCCcceeEEeee-cCceEeeeccccccCCCcchhhccc--chhhccCchhhhcCccC-----------------------
Confidence            999999988653 4679999999997776655555554  55888888887654321                       


Q ss_pred             CCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcc
Q psy5279        1051 GQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSE 1130 (1310)
Q Consensus      1051 g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~ 1130 (1310)
                                                                                                      
T Consensus       197 --------------------------------------------------------------------------------  196 (864)
T KOG4717|consen  197 --------------------------------------------------------------------------------  196 (864)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccccchhccCHHHHHHH
Q psy5279        1131 KGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFL 1210 (1310)
Q Consensus      1131 ~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~iS~eAkdfI 1210 (1310)
                                             -++|||||+|||+|+|.||.+||.-.++.||+..|+.++|..|   ..+|.+|||||
T Consensus       197 -----------------------APAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvP---shvS~eCrdLI  250 (864)
T KOG4717|consen  197 -----------------------APAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVP---SHVSKECRDLI  250 (864)
T ss_pred             -----------------------CcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCc---hhhhHHHHHHH
Confidence                                   2578999999999999999999999999999999999999987   68999999999


Q ss_pred             HHhhhcCCCCCCCHHHhhcCCccCC
Q psy5279        1211 MLIFKRAPGKRPTVEECHENRWLVP 1235 (1310)
Q Consensus      1211 ~~lL~~dP~kRpTa~e~L~HpWl~~ 1235 (1310)
                      .+||++||.+|.|++|+-.|+|+++
T Consensus       251 ~sMLvRdPkkRAslEeI~s~~Wlq~  275 (864)
T KOG4717|consen  251 QSMLVRDPKKRASLEEIVSTSWLQA  275 (864)
T ss_pred             HHHHhcCchhhccHHHHhccccccC
Confidence            9999999999999999999999965

>KOG4236|consensus

Probab=99.97  E-value=4.7e-31  Score=303.59  Aligned_cols=234  Identities=24%  Similarity=0.344  Sum_probs=183.6

Q ss_pred             ccCCCeee--eceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeE
Q psy5279         180 PITDAYDF--GDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       180 ~~~d~Y~i--~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~l  255 (1310)
                      .+...|++  .++||+|.||+||-|+++.||+.||||+|.+..  .+....+++|++||++++||.||.|.-.|++++.+
T Consensus       559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~erv  638 (888)
T KOG4236|consen  559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERV  638 (888)
T ss_pred             hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceE
Confidence            45566766  478999999999999999999999999998643  23456789999999999999999999999999999


Q ss_pred             EEEEecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC-CeEEEEeeccceeec
Q psy5279         256 TIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG-RHLLLTDFGLSRRIT  333 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~-~~VKLsDFGLAr~i~  333 (1310)
                      +.|||-+.|..|.-.+.. .+.++|...++++.||+.||.|||.+||+|+||||||||+.+..+ .++||||||+||.+.
T Consensus       639 FVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg  718 (888)
T KOG4236|consen  639 FVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG  718 (888)
T ss_pred             EEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecc
Confidence            999999987666555543 467999999999999999999999999999999999999987654 489999999999999


Q ss_pred             CCCCCCCcccchHHHhhhc-C-C--------------------CccccCCCCCCCC-----CCCcchhhhhhhcccchhh
Q psy5279         334 SFGKLNPLEYDVRYVRQAL-R-H--------------------PWLNFADRKPTED-----TPKLNTDALRNYYNLYKDW  386 (1310)
Q Consensus       334 ~~~~l~~~~~t~~yv~~~~-r-~--------------------P~l~~~~~~~~~~-----~p~~~~~~~~~~~~~~~D~  386 (1310)
                      +.+.-.+.+|||.|+++.. | .                    .-.+|+..+...+     .-...+..++.+...+-|+
T Consensus       719 EksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~Aidl  798 (888)
T KOG4236|consen  719 EKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDL  798 (888)
T ss_pred             hhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHH
Confidence            8888889999999977521 1 0                    0011111110000     0011223344455556777


Q ss_pred             chhhhhhhcccCCCCCCccCCCcceec
Q psy5279         387 YGNAAVRRYYRRRPLNSCYTHPSRMIY  413 (1310)
Q Consensus       387 ~~~~~l~~~~~r~~~~~cl~hpw~~~~  413 (1310)
                      +.+++.-.+.+|++++.|+.|||+-.+
T Consensus       799 In~LLqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  799 INNLLQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             HHHHHHHHHHHhcchHhhccchhhhcc
Confidence            777777778999999999999998433

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=1.8e-31  Score=312.31  Aligned_cols=101  Identities=26%  Similarity=0.357  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++|||||||||+|||++.  .+.+||+|||+++..............||+.|+|||++.+..++.+
T Consensus       186 ~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~--~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  263 (391)
T PHA03212        186 AIERSVLRAIQYLHENRIIHRDIKAENIFINH--PGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPA  263 (391)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCChHhEEEcC--CCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcH
Confidence            45679999999999999999999999999975  4569999999986432221112223457899999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      +|||||||++|+|++|..||.+.
T Consensus       264 ~DiwSlGvil~elltg~~p~~~~  286 (391)
T PHA03212        264 VDIWSAGIVLFEMATCHDSLFEK  286 (391)
T ss_pred             HHHHHHHHHHHHHHHCCCCcCCc
Confidence            99999999999999999887653

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.97  E-value=3.7e-31  Score=291.28  Aligned_cols=105  Identities=28%  Similarity=0.418  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||++.........  ....+++.|+|||++.+..++
T Consensus       110 ~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~--~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~  185 (288)
T cd07863         110 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS--GGQVKLADFGLARIYSCQMAL--TPVVVTLWYRAPEVLLQSTYA  185 (288)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEECccCccccccCcccC--CCccccccccCchHhhCCCCC
Confidence            3445779999999999999999999999999975  456999999998755322111  123467899999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++||||+||++|+|++|.+||.+.+...
T Consensus       186 ~~~DiwslG~~l~~l~~g~~~f~~~~~~~  214 (288)
T cd07863         186 TPVDMWSVGCIFAEMFRRKPLFCGNSEAD  214 (288)
T ss_pred             CcchhhhHHHHHHHHHhCCcCcCCCCHHH
Confidence            99999999999999999999998765443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.97  E-value=9.1e-32  Score=304.56  Aligned_cols=99  Identities=27%  Similarity=0.409  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys~ 1028 (1310)
                      .++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++..............||+.|+|||++.+. .++.
T Consensus       109 ~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~--~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  186 (332)
T cd05614         109 FYSGEIILALEHLHKLGIVYRDIKLENILLDS--EGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGK  186 (332)
T ss_pred             HHHHHHHHHHHHHHHCCcEecCCCHHHeEECC--CCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCC
Confidence            34569999999999999999999999999986  45799999999875433222222234578999999998765 4677


Q ss_pred             ccchhHHHHHHHHHhcCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      ++|||||||++|+|++|..||.
T Consensus       187 ~~DiwslG~il~elltg~~pf~  208 (332)
T cd05614         187 AVDWWSLGILIFELLTGASPFT  208 (332)
T ss_pred             ccccccchhhhhhhhcCCCCCC
Confidence            8899999999999999988884

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.97  E-value=6.6e-31  Score=300.61  Aligned_cols=105  Identities=23%  Similarity=0.393  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.......  .....+++.|+|||++.+..++.
T Consensus       122 ~~~~~qi~~aL~~LH~~givHrDikp~Nill~~--~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~  197 (355)
T cd07874         122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKE  197 (355)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCChHHEEECC--CCCEEEeeCcccccCCCccc--cCCccccCCccCHHHHcCCCCCc
Confidence            345679999999999999999999999999975  45799999999875432211  12235679999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ++|||||||++|+|++|..||.+.+..+.
T Consensus       198 ~~DiwslG~il~el~~g~~pf~~~~~~~~  226 (355)
T cd07874         198 NVDIWSVGCIMGEMVRHKILFPGRDYIDQ  226 (355)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            99999999999999999999988765443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.97  E-value=2.5e-31  Score=315.54  Aligned_cols=107  Identities=21%  Similarity=0.394  Sum_probs=87.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      ...++.||+.||+|||++||+||||||+|||++.. ...+||+|||+|+.........  ...||+.|+|||++.+. .|
T Consensus       172 ~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~-~~~vkL~DFGla~~~~~~~~~~--~~~~t~~y~aPE~~~~~~~~  248 (440)
T PTZ00036        172 VKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPN-THTLKLCDFGSAKNLLAGQRSV--SYICSRFYRAPELMLGATNY  248 (440)
T ss_pred             HHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCC-CCceeeeccccchhccCCCCcc--cCCCCcCccCHHHhcCCCCC
Confidence            34567899999999999999999999999999752 3469999999997654322221  23467999999998764 68


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      +.++|||||||++|+|++|.+||.+.+..+.
T Consensus       249 ~~~~DiwSlGvil~elltG~~pf~~~~~~~~  279 (440)
T PTZ00036        249 TTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ  279 (440)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            9999999999999999999999998765543

>KOG0580|consensus

Probab=99.97  E-value=1.1e-31  Score=288.45  Aligned_cols=227  Identities=26%  Similarity=0.344  Sum_probs=183.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      -++|++++.||+|.||.||+|+.+.++-.||+|++-+..   .+....+.||++|-..|+||||++++++|.+...+||+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            367899999999999999999999999999999997642   24556789999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhh--hcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         259 SELAGGGELLHSLT--RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       259 mEy~~GGeL~~~l~--~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      +||..+|+|+..+.  ....++|..+..|++|++.||.|||.++||||||||+|+|++.++  .+||+|||.+-.- +.+
T Consensus       101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~--~lkiAdfGwsV~~-p~~  177 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHA-PSN  177 (281)
T ss_pred             EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCC--CeeccCCCceeec-CCC
Confidence            99999999999998  556699999999999999999999999999999999999998876  7999999999654 467


Q ss_pred             CCCCcccchHHHhhhcCCCccccC--CCC--------CCCCCCCcchhhhh---------------hhcccchhhchhhh
Q psy5279         337 KLNPLEYDVRYVRQALRHPWLNFA--DRK--------PTEDTPKLNTDALR---------------NYYNLYKDWYGNAA  391 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~~r~P~l~~~--~~~--------~~~~~p~~~~~~~~---------------~~~~~~~D~~~~~~  391 (1310)
                      .-.++|||..|..+.+..+-....  |..        -+...|+|+.+.-+               .+..-++|.++.++
T Consensus       178 kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI~~ll  257 (281)
T KOG0580|consen  178 KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAADLISRLL  257 (281)
T ss_pred             CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHHHHHHHh
Confidence            778999998877543322110000  000        00011333222221               12234578889999


Q ss_pred             hhhcccCCCCCCccCCCcce
Q psy5279         392 VRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       392 l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +.+...|++..+.+.|||+.
T Consensus       258 ~~~p~~r~~l~~v~~hpwI~  277 (281)
T KOG0580|consen  258 VKNPIERLALTEVMDHPWIV  277 (281)
T ss_pred             ccCccccccHHHHhhhHHHH
Confidence            99999999999999999974

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.7e-31  Score=306.14  Aligned_cols=159  Identities=22%  Similarity=0.375  Sum_probs=125.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc------------------------
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL------------------------ 1004 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~------------------------ 1004 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.+......                        
T Consensus       104 ~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (364)
T cd05599         104 RFYIAETILAIDSIHKLGYIHRDIKPDNLLLDA--KGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSS  181 (364)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEeecccceeccccccccccccccccccccccccccccccc
Confidence            345679999999999999999999999999975  557999999998654221100                        


Q ss_pred             -------------cccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccc-
Q psy5279        1005 -------------IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY- 1070 (1310)
Q Consensus      1005 -------------~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~- 1070 (1310)
                                   ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+......+.. 
T Consensus       182 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~  261 (364)
T cd05599         182 KRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFP  261 (364)
T ss_pred             cccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCC
Confidence                         001134789999999999999999999999999999999999999998877766655433222221 


Q ss_pred             cchhccHHHHHHHHHhccCCcchhc---HHhhhCCCcccccc
Q psy5279        1071 LFKELTQEATRFLMLIFKHEVDWIT---LANNIDHEFWHVKD 1109 (1310)
Q Consensus      1071 ~~~~lS~eakdLL~~il~~~~~rit---~~e~L~H~f~~~~~ 1109 (1310)
                      ....+++++++||.+|+.++.+|++   +.+++.|+||...+
T Consensus       262 ~~~~~s~~~~~li~~ll~~p~~R~~~~~~~~ll~h~~~~~~~  303 (364)
T cd05599         262 DEVPLSPEAKDLIKRLCCEAERRLGNNGVNEIKSHPFFKGVD  303 (364)
T ss_pred             CCCCCCHHHHHHHHHHccCHhhcCCCCCHHHHhcCCCcCCCC
Confidence            1125789999999999988888997   99999999987644

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.97  E-value=6.2e-31  Score=294.73  Aligned_cols=106  Identities=22%  Similarity=0.317  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec--CCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV--RSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAE 1023 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~--~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~ 1023 (1310)
                      +..++.||+.||+|||++||+||||||+|||+...  ....+||+|||+++........  ......+|+.|+|||++.+
T Consensus       110 ~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07868         110 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             HHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcC
Confidence            45678899999999999999999999999999542  2457999999999765322111  1122356789999999987


Q ss_pred             C-CCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1024 E-PIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1024 ~-~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      . .++.++||||+||++|+|++|.+||.+..
T Consensus       190 ~~~~~~~~DiwslG~il~el~~g~~~f~~~~  220 (317)
T cd07868         190 ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  220 (317)
T ss_pred             CCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence            4 58899999999999999999999998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.97  E-value=5.8e-31  Score=301.86  Aligned_cols=103  Identities=25%  Similarity=0.456  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++......  ......+|+.|+|||++.+..++.+
T Consensus       127 ~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~--~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~  202 (359)
T cd07876         127 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTACTNF--MMTPYVVTRYYRAPEVILGMGYKEN  202 (359)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEEecCCCccccccCc--cCCCCcccCCCCCchhccCCCCCcc
Confidence            45679999999999999999999999999985  4679999999986543221  1222356789999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      +|||||||++|+|++|..||.+.+...
T Consensus       203 ~DiwSlG~il~el~tg~~pf~~~~~~~  229 (359)
T cd07876         203 VDIWSVGCIMGELVKGSVIFQGTDHID  229 (359)
T ss_pred             hhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            999999999999999999999876543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00284 protein kinase; Provisional

Probab=99.97  E-value=4.8e-31  Score=314.42  Aligned_cols=107  Identities=23%  Similarity=0.391  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCC--------------CcEEEEeeccceeeccCCcccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRS--------------VQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~--------------~~VKL~DFGlAk~~~~~g~~~~~~~tGtp 1013 (1310)
                      ..++.||+.||+|||+ .|||||||||+|||++..+.              ..+||+|||.+.....    ......||+
T Consensus       234 ~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~  309 (467)
T PTZ00284        234 AQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH----SRTAIVSTR  309 (467)
T ss_pred             HHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc----ccccccCCc
Confidence            4456799999999998 59999999999999975321              2599999998754221    112345789


Q ss_pred             cccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1014 ~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      .|+|||++.+..|+.++|||||||++|+|++|++||.+.+..+...
T Consensus       310 ~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~  355 (467)
T PTZ00284        310 HYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLH  355 (467)
T ss_pred             cccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence            9999999999999999999999999999999999998876554433

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.97  E-value=4.2e-31  Score=298.90  Aligned_cols=103  Identities=29%  Similarity=0.559  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++....... ......|++.|+|||++.+..++.
T Consensus       104 ~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  180 (324)
T cd05587         104 VFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDA--EGHIKIADFGMCKENIFGGK-TTRTFCGTPDYIAPEIIAYQPYGK  180 (324)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcC--CCCEEEeecCcceecCCCCC-ceeeecCCccccChhhhcCCCCCc
Confidence            345679999999999999999999999999985  45699999999864321111 122335779999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++||||+||++|+|++|..||.+.+.
T Consensus       181 ~~DiwslGvil~elltG~~pf~~~~~  206 (324)
T cd05587         181 SVDWWAFGVLLYEMLAGQPPFDGEDE  206 (324)
T ss_pred             ccchhhhHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999976543

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=4.4e-31  Score=300.25  Aligned_cols=102  Identities=24%  Similarity=0.444  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++....... ......|++.|+|||++.+..++.
T Consensus        98 ~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~--~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  174 (328)
T cd05593          98 RFYGAEIVSALDYLHSGKIVYRDLKLENLMLDK--DGHIKITDFGLCKEGITDAA-TMKTFCGTPEYLAPEVLEDNDYGR  174 (328)
T ss_pred             HHHHHHHHHHHHHHHhCCeEecccCHHHeEECC--CCcEEEecCcCCccCCCccc-ccccccCCcCccChhhhcCCCCCc
Confidence            345679999999999999999999999999985  45699999999865322111 112335789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|||||||++|+|++|..||.+.+
T Consensus       175 ~~DiwslGvil~elltG~~Pf~~~~  199 (328)
T cd05593         175 AVDWWGLGVVMYEMMCGRLPFYNQD  199 (328)
T ss_pred             cCCccccchHHHHHhhCCCCCCCCC
Confidence            9999999999999999999997654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0600|consensus

Probab=99.97  E-value=1.1e-30  Score=302.49  Aligned_cols=112  Identities=24%  Similarity=0.406  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      ...+++||++||+|||++||+|||||..||||+.  .+.+||+|||+|+.....+........-|.+|+|||.+.+. .|
T Consensus       220 IKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn--~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Y  297 (560)
T KOG0600|consen  220 IKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDN--NGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSY  297 (560)
T ss_pred             HHHHHHHHHHHHHHHhhcCeeeccccccceEEcC--CCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCccc
Confidence            4556899999999999999999999999999986  56799999999997765554333334457899999999987 69


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I 1061 (1310)
                      +..+|+||+||||.||+.|++.|.|.++.+....|
T Consensus       298 g~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kI  332 (560)
T KOG0600|consen  298 GTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKI  332 (560)
T ss_pred             ccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHH
Confidence            99999999999999999999999999887765544

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.97  E-value=4.7e-31  Score=303.74  Aligned_cols=159  Identities=23%  Similarity=0.346  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-------------------------
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT------------------------- 1003 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~------------------------- 1003 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.......                         
T Consensus       104 ~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~--~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (363)
T cd05628         104 QFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDS--KGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRK  181 (363)
T ss_pred             HHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC--CCCEEEeeccCcccccccccccccccccccccccccccccccccc
Confidence            345679999999999999999999999999975  45799999999865421100                         


Q ss_pred             ---------ccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccc
Q psy5279        1004 ---------LIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLF 1072 (1310)
Q Consensus      1004 ---------~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~ 1072 (1310)
                               ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+...++....  ..++.. 
T Consensus       182 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-  260 (363)
T cd05628         182 AETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPE-  260 (363)
T ss_pred             cchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCc-
Confidence                     00112368899999999999999999999999999999999999999988887777765432  333321 


Q ss_pred             hhccHHHHHHHHHhccCCcc---hhcHHhhhCCCccccccc
Q psy5279        1073 KELTQEATRFLMLIFKHEVD---WITLANNIDHEFWHVKDL 1110 (1310)
Q Consensus      1073 ~~lS~eakdLL~~il~~~~~---rit~~e~L~H~f~~~~~l 1110 (1310)
                      ..+++++++||.+++..+.+   |.++.+++.|+||...+.
T Consensus       261 ~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~~~~  301 (363)
T cd05628         261 VPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGVDW  301 (363)
T ss_pred             CCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCCCCH
Confidence            24789999999987765443   568999999999876543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=7.9e-31  Score=296.91  Aligned_cols=102  Identities=29%  Similarity=0.536  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.....+. ......|++.|+|||++.+..++.+
T Consensus       100 ~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~--~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~  176 (320)
T cd05590         100 FYAAEITSALMFLHDKGIIYRDLKLDNVLLDH--EGHCKLADFGMCKEGIFNGK-TTSTFCGTPDYIAPEILQEMLYGPS  176 (320)
T ss_pred             HHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC--CCcEEEeeCCCCeecCcCCC-cccccccCccccCHHHHcCCCCCCc
Confidence            34679999999999999999999999999975  45699999999875322221 1223457899999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      +|||||||++|+|++|..||.+.+.
T Consensus       177 ~DiwslG~il~el~~g~~Pf~~~~~  201 (320)
T cd05590         177 VDWWAMGVLLYEMLCGHAPFEAENE  201 (320)
T ss_pred             cchhhhHHHHHHHhhCCCCCCCCCH
Confidence            9999999999999999999987554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.97  E-value=1.5e-30  Score=295.53  Aligned_cols=102  Identities=25%  Similarity=0.423  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHHHC-CceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~-gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.|++.||.|||++ +|+||||||+|||++.  ++.+||+|||++......   ......|++.|+|||++.+..++.
T Consensus       107 ~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~  181 (331)
T cd06649         107 KVSIAVLRGLAYLREKHQIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSV  181 (331)
T ss_pred             HHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcC--CCcEEEccCccccccccc---ccccCCCCcCcCCHhHhcCCCCCc
Confidence            4467999999999986 6999999999999975  456999999998654321   112235779999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++|||||||++|+|++|..||...+..+
T Consensus       182 ~~DiwslG~il~el~tg~~p~~~~~~~~  209 (331)
T cd06649         182 QSDIWSMGLSLVELAIGRYPIPPPDAKE  209 (331)
T ss_pred             hHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            9999999999999999999998765443

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=2e-30  Score=294.86  Aligned_cols=103  Identities=23%  Similarity=0.483  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++......    ....|++.|+|||++.+ ..+
T Consensus       120 ~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~  193 (343)
T cd07878         120 VQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE--DCELRILDFGLARQADDEM----TGYVATRWYRAPEIMLNWMHY  193 (343)
T ss_pred             HHHHHHHHHHHHHHHHHCCeecccCChhhEEECC--CCCEEEcCCccceecCCCc----CCccccccccCchHhcCCccC
Confidence            3456789999999999999999999999999985  4579999999987653221    12356789999999977 468


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      +.++|||||||++|+|++|..||.+.+..+
T Consensus       194 ~~~~DiwslG~il~el~~g~~pf~~~~~~~  223 (343)
T cd07878         194 NQTVDIWSVGCIMAELLKGKALFPGNDYID  223 (343)
T ss_pred             CchhhhHhHHHHHHHHHHCCCCCCCCCHHH
Confidence            899999999999999999999998765433

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=5.2e-31  Score=299.26  Aligned_cols=156  Identities=25%  Similarity=0.425  Sum_probs=126.9

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC---------------------------
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG--------------------------- 1002 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g--------------------------- 1002 (1310)
                      .++.||+.||+|||++||+||||||+|||++.  ++.+||+|||++.......                           
T Consensus       105 ~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (350)
T cd05573         105 FYIAELVLALDSVHKLGFIHRDIKPDNILIDA--DGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQ  182 (350)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEeecCCCCccCcccCccccccccccccccccccccccccccc
Confidence            45679999999999999999999999999975  4579999999987554322                           


Q ss_pred             -cccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcc--ccccccccchhccHHH
Q psy5279        1003 -TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF--VRYRFEYLFKELTQEA 1079 (1310)
Q Consensus      1003 -~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~--~~~~f~~~~~~lS~ea 1079 (1310)
                       ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+..  ....++.. ..+++++
T Consensus       183 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-~~~~~~~  261 (350)
T cd05573         183 RRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPD-PPVSPEA  261 (350)
T ss_pred             ccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCC-CCCCHHH
Confidence             0111233578999999999999999999999999999999999999999887776666554  23333332 2379999


Q ss_pred             HHHHHHhccCCcchhc-HHhhhCCCccccc
Q psy5279        1080 TRFLMLIFKHEVDWIT-LANNIDHEFWHVK 1108 (1310)
Q Consensus      1080 kdLL~~il~~~~~rit-~~e~L~H~f~~~~ 1108 (1310)
                      ++||.+|+.++.+|++ +.+++.|+||...
T Consensus       262 ~~li~~ll~dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         262 IDLICRLLCDPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             HHHHHHHccChhhcCCCHHHHhcCCCcCCC
Confidence            9999999998889999 9999999998753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=1.3e-30  Score=295.25  Aligned_cols=101  Identities=29%  Similarity=0.515  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+.. .....|++.|+|||++.+..++.+
T Consensus       104 ~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~  180 (323)
T cd05584         104 FYLSEISLALEHLHQQGIIYRDLKPENILLDA--QGHVKLTDFGLCKESIHEGTV-THTFCGTIEYMAPEILMRSGHGKA  180 (323)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEeeCcCCeecccCCCc-ccccCCCccccChhhccCCCCCCc
Confidence            44679999999999999999999999999975  457999999998754322221 223457899999999999899999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +|||||||++|+|++|..||.+.+
T Consensus       181 ~DiwslG~il~ell~G~~pf~~~~  204 (323)
T cd05584         181 VDWWSLGALMYDMLTGAPPFTAEN  204 (323)
T ss_pred             ceecccHHHHHHHhcCCCCCCCCC
Confidence            999999999999999999997654

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0201|consensus

Probab=99.96  E-value=2e-30  Score=296.87  Aligned_cols=204  Identities=27%  Similarity=0.399  Sum_probs=168.8

Q ss_pred             CCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecc--cCcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCccc
Q psy5279         592 EPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE--YSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTAS  669 (1310)
Q Consensus       592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  669 (1310)
                      .++.-.|.=+..|-||.||.|.||...- |.+.||.|++.  +..|....+.+|...|-++++++|...+.+|.-.    
T Consensus         9 ~~~~~~~~~~~~IgrGsfG~Vyk~~d~~-t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g----   83 (467)
T KOG0201|consen    9 IDPELLYTKLELIGRGSFGEVYKAIDNK-TKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG----   83 (467)
T ss_pred             CCcccccccchhccccccceeeeeeecc-ccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeec----
Confidence            3455667778999999999999999988 99999999975  5566778899999999999999999999999988    


Q ss_pred             chhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccccccc
Q psy5279         670 NIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKT  749 (1310)
Q Consensus       670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  749 (1310)
                      .-+-++||+|.|.-|+.-|..---..|                                                     
T Consensus        84 ~~LwiiMey~~gGsv~~lL~~~~~~~E-----------------------------------------------------  110 (467)
T KOG0201|consen   84 TKLWIIMEYCGGGSVLDLLKSGNILDE-----------------------------------------------------  110 (467)
T ss_pred             ccHHHHHHHhcCcchhhhhccCCCCcc-----------------------------------------------------
Confidence            457789999999987765432110000                                                     


Q ss_pred             ccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcc
Q psy5279         750 WEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAP  829 (1310)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  829 (1310)
                                                                                                      
T Consensus       111 --------------------------------------------------------------------------------  110 (467)
T KOG0201|consen  111 --------------------------------------------------------------------------------  110 (467)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCC
Q psy5279         830 VIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGD  909 (1310)
Q Consensus       830 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~  909 (1310)
                                                                                                      
T Consensus       111 --------------------------------------------------------------------------------  110 (467)
T KOG0201|consen  111 --------------------------------------------------------------------------------  110 (467)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEE
Q psy5279         910 KLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKL  989 (1310)
Q Consensus       910 ~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL  989 (1310)
                                                          +....++++++.||.|||.++.+|||||+.|||+...  +.|||
T Consensus       111 ------------------------------------~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~--g~vkl  152 (467)
T KOG0201|consen  111 ------------------------------------FEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSES--GDVKL  152 (467)
T ss_pred             ------------------------------------ceeeeehHHHHHHhhhhhhcceecccccccceeEecc--CcEEE
Confidence                                                0112346789999999999999999999999999864  67999


Q ss_pred             EeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279         990 IDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus       990 ~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      +|||++.+++..... ...+.|||+||||||+.+..|+.++||||||+++|||++|.+|+...
T Consensus       153 ~DfgVa~ql~~~~~r-r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~  214 (467)
T KOG0201|consen  153 ADFGVAGQLTNTVKR-RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKL  214 (467)
T ss_pred             Eecceeeeeechhhc-cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCccc
Confidence            999999877644332 25567899999999999999999999999999999999999999643

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.96  E-value=1.5e-30  Score=311.76  Aligned_cols=104  Identities=24%  Similarity=0.409  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||+|||++||+||||||+|||++.  ...+||+|||+++....... ......+||+.|+|||++.+..+
T Consensus       171 ~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~--~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  248 (478)
T PTZ00267        171 VGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMP--TGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRY  248 (478)
T ss_pred             HHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECC--CCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCC
Confidence            3456789999999999999999999999999985  45799999999986543211 11223457899999999999999


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +.++|||||||++|+|++|..||.+.+
T Consensus       249 ~~~~Dv~slG~~l~el~tg~~Pf~~~~  275 (478)
T PTZ00267        249 SKKADMWSLGVILYELLTLHRPFKGPS  275 (478)
T ss_pred             CcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999999997654

>KOG0198|consensus

Probab=99.96  E-value=4.3e-30  Score=292.00  Aligned_cols=232  Identities=25%  Similarity=0.401  Sum_probs=178.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC--eEEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD--SFTIIS  259 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~--~lyLVm  259 (1310)
                      ...+...+.||+|+||.||++.+..+|+.+|||.+........+.+.+|+.+|.+|+|||||++++......  .+++.|
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m   95 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM   95 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence            345778899999999999999999999999999987653333566899999999999999999999865555  699999


Q ss_pred             ecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC----
Q psy5279         260 ELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS----  334 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~----  334 (1310)
                      ||++||+|.+.+.+.+ .++|..++.|.+||++||.|||++|||||||||+|||++.. +..+||+|||+|+....    
T Consensus        96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~-~~~~KlaDFG~a~~~~~~~~~  174 (313)
T KOG0198|consen   96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS-NGDVKLADFGLAKKLESKGTK  174 (313)
T ss_pred             eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC-CCeEEeccCcccccccccccc
Confidence            9999999999998877 69999999999999999999999999999999999999863 23799999999998764    


Q ss_pred             CCCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCCc-cCCCcce
Q psy5279         335 FGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNSC-YTHPSRM  411 (1310)
Q Consensus       335 ~~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~c-l~hpw~~  411 (1310)
                      .....+..||+.|++     |+.-...                .......| | +||.+|++++...||.+- ....  .
T Consensus       175 ~~~~~~~~Gtp~~ma-----PEvi~~g----------------~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~--~  231 (313)
T KOG0198|consen  175 SDSELSVQGTPNYMA-----PEVIRNG----------------EVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAE--A  231 (313)
T ss_pred             ccccccccCCccccC-----chhhcCC----------------CcCCccchhhhcCCEEEeccCCCCcchhhcchHH--H
Confidence            112334566666654     3332110                00112456 6 899999999998888774 1111  2


Q ss_pred             ecCCCCCCCCCCCCcceecccccccccc
Q psy5279         412 IYPPGTQFTPEPTPDKVLVSRDLRDVKT  439 (1310)
Q Consensus       412 ~~~~~~~~tp~~~p~~i~v~~~~rD~~~  439 (1310)
                      .+..+.....+++|..  ++.+.+||..
T Consensus       232 ~~~ig~~~~~P~ip~~--ls~~a~~Fl~  257 (313)
T KOG0198|consen  232 LLLIGREDSLPEIPDS--LSDEAKDFLR  257 (313)
T ss_pred             HHHHhccCCCCCCCcc--cCHHHHHHHH
Confidence            3334444433356666  6666666554

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.96  E-value=1e-30  Score=292.80  Aligned_cols=106  Identities=23%  Similarity=0.420  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ...+||+|||++........ ......+++.|+|||++.+ ..++
T Consensus       107 ~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  183 (309)
T cd07872         107 KIFLYQILRGLAYCHRRKVLHRDLKPQNLLINE--RGELKLADFGLARAKSVPTK-TYSNEVVTLWYRPPDVLLGSSEYS  183 (309)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECccccceecCCCcc-ccccccccccccCCHHHhCCCCCC
Confidence            345679999999999999999999999999985  45699999999865432211 1122346789999999875 4578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++|||||||++|+|++|.+||.+.+..+.
T Consensus       184 ~~~DiwslG~il~el~tg~~pf~~~~~~~~  213 (309)
T cd07872         184 TQIDMWGVGCIFFEMASGRPLFPGSTVEDE  213 (309)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            899999999999999999999988765443

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.96  E-value=4.9e-31  Score=298.50  Aligned_cols=102  Identities=25%  Similarity=0.485  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||+ +||+||||||+|||++.  ++.+||+|||+++........ .....|++.|+|||++.+..++
T Consensus        98 ~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~  174 (325)
T cd05594          98 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK--DGHIKITDFGLCKEGIKDGAT-MKTFCGTPEYLAPEVLEDNDYG  174 (325)
T ss_pred             HHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECC--CCCEEEecCCCCeecCCCCcc-cccccCCcccCCHHHHccCCCC
Confidence            3456799999999997 89999999999999975  457999999998653222211 1223578999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      .++|||||||++|+|++|..||.+.+
T Consensus       175 ~~~DiwslG~il~el~tG~~Pf~~~~  200 (325)
T cd05594         175 RAVDWWGLGVVMYEMMCGRLPFYNQD  200 (325)
T ss_pred             CccccccccceeeeeccCCCCCCCCC
Confidence            99999999999999999999997654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=6.8e-31  Score=297.62  Aligned_cols=157  Identities=24%  Similarity=0.433  Sum_probs=109.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++....... ......|++.|+|||++.+. .++
T Consensus        99 ~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~--~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  175 (330)
T cd05586          99 KFYIAELVLALEHLHKYDIVYRDLKPENILLDA--TGHIALCDFGLSKANLTDNK-TTNTFCGTTEYLAPEVLLDEKGYT  175 (330)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEecCCcCcCCCCCCC-CccCccCCccccCHHHHcCCCCCC
Confidence            345669999999999999999999999999985  45699999999864322111 11223466778888776432 234


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccc
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      .+                                                                              
T Consensus       176 ~~------------------------------------------------------------------------------  177 (330)
T cd05586         176 KH------------------------------------------------------------------------------  177 (330)
T ss_pred             Cc------------------------------------------------------------------------------
Confidence            44                                                                              


Q ss_pred             cccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhc
Q psy5279        1108 KDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1187 (1310)
Q Consensus      1108 ~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~ 1187 (1310)
                                                                       +||||+||++|+|++|..||.+.+..+.+.+
T Consensus       178 -------------------------------------------------~DvwslGvil~elltG~~Pf~~~~~~~~~~~  208 (330)
T cd05586         178 -------------------------------------------------VDFWSLGVLVFEMCCGWSPFYAEDTQQMYRN  208 (330)
T ss_pred             -------------------------------------------------cceeccccEEEEeccCCCCCCCCCHHHHHHH
Confidence                                                             4555555555555555555555444444444


Q ss_pred             ccccccccccchhccCHHHHHHHHHhhhcCCCCCC----CHHHhhcCCccCCch
Q psy5279        1188 VNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRP----TVEECHENRWLVPSE 1237 (1310)
Q Consensus      1188 I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRp----Ta~e~L~HpWl~~~~ 1237 (1310)
                      +......++.  ..+|+++++||++||.+||.+||    +++|+|+||||...+
T Consensus       209 i~~~~~~~~~--~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~  260 (330)
T cd05586         209 IAFGKVRFPK--NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID  260 (330)
T ss_pred             HHcCCCCCCC--ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence            4444444432  34799999999999999999998    799999999997644

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.96  E-value=8.7e-31  Score=290.51  Aligned_cols=101  Identities=24%  Similarity=0.467  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||+|||++||+||||||+|||++.  +..+||+|||++.........  ....|++.|+|||++.+..++.
T Consensus       105 ~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~  180 (285)
T cd05631         105 IFYAAELCCGLEDLQRERIVYRDLKPENILLDD--RGHIRISDLGLAVQIPEGETV--RGRVGTVGYMAPEVINNEKYTF  180 (285)
T ss_pred             HHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC--CCCEEEeeCCCcEEcCCCCee--cCCCCCCCccCHhhhcCCCCCc
Confidence            456779999999999999999999999999975  456999999998765322211  2234679999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|||||||++|+|++|..||.+.+
T Consensus       181 ~~DvwslGvil~el~~g~~pf~~~~  205 (285)
T cd05631         181 SPDWWGLGCLIYEMIQGQSPFRKRK  205 (285)
T ss_pred             ccCchhHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999997653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.96  E-value=2.3e-30  Score=292.61  Aligned_cols=103  Identities=28%  Similarity=0.522  Sum_probs=85.8

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++........ ......|++.|+|||++.+..++.+
T Consensus       100 ~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~--~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~  176 (321)
T cd05591         100 FYAAEVTLALMFLHRHGVIYRDLKLDNILLDA--EGHCKLADFGMCKEGILNGV-TTTTFCGTPDYIAPEILQELEYGPS  176 (321)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEeecccceecccCCc-cccccccCccccCHHHHcCCCCCCc
Confidence            45679999999999999999999999999975  45799999999875322221 1223357899999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      +|||||||++|+|++|..||.+.+..
T Consensus       177 ~DvwslG~il~el~tg~~Pf~~~~~~  202 (321)
T cd05591         177 VDWWALGVLMYEMMAGQPPFEADNED  202 (321)
T ss_pred             cceechhHHHHHHhcCCCCCCCCCHH
Confidence            99999999999999999999876543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0604|consensus

Probab=99.96  E-value=1.1e-30  Score=286.89  Aligned_cols=231  Identities=23%  Similarity=0.364  Sum_probs=184.5

Q ss_pred             CccCCCeeee-ceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHh-cCCCCcceEEEEEEe----C
Q psy5279         179 KPITDAYDFG-DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQ-LCHRNLVRLHDSYET----K  252 (1310)
Q Consensus       179 ~~~~d~Y~i~-~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~-L~HPNIVkL~d~f~~----~  252 (1310)
                      ..++++|.+. ++||-|-.|+|..|.++.||+.+|+|++..     ....+||+++.-. -.|||||+++++|+.    .
T Consensus        57 ~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r  131 (400)
T KOG0604|consen   57 YSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGR  131 (400)
T ss_pred             ccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence            3577888876 579999999999999999999999998853     3346788887544 479999999999864    4


Q ss_pred             CeEEEEEecCCCCchHHHhhhcCC--CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccc
Q psy5279         253 DSFTIISELAGGGELLHSLTRQSY--YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLS  329 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~~~--lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLA  329 (1310)
                      ..+.+|||+|+||+||.++..++.  |+|.++..+++||+.|+.|||+.+|.||||||||+|....+ +..+||+|||+|
T Consensus       132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA  211 (400)
T KOG0604|consen  132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA  211 (400)
T ss_pred             eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence            578999999999999999987765  99999999999999999999999999999999999998654 567999999999


Q ss_pred             eeecCCCCCCCcccchHHHhhhcCCC-------------------------ccccCCCCCCCC---------CCCcchhh
Q psy5279         330 RRITSFGKLNPLEYDVRYVRQALRHP-------------------------WLNFADRKPTED---------TPKLNTDA  375 (1310)
Q Consensus       330 r~i~~~~~l~~~~~t~~yv~~~~r~P-------------------------~l~~~~~~~~~~---------~p~~~~~~  375 (1310)
                      |.-...+.+.+.|+||-||++..+.|                         |..-... +..+         .-.|....
T Consensus       212 K~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~-aispgMk~rI~~gqy~FP~pE  290 (400)
T KOG0604|consen  212 KETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-AISPGMKRRIRTGQYEFPEPE  290 (400)
T ss_pred             cccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc-cCChhHHhHhhccCccCCChh
Confidence            99888889999999999988654433                         3221110 0000         01223334


Q ss_pred             hhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCC
Q psy5279         376 LRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPP  415 (1310)
Q Consensus       376 ~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~  415 (1310)
                      ++.++..+||-+.+++--+.+.|+|+.+...|||++.+..
T Consensus       291 Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~  330 (400)
T KOG0604|consen  291 WSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEA  330 (400)
T ss_pred             HhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccccc
Confidence            4445556677777777777899999999999999977664

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.1e-30  Score=301.86  Aligned_cols=156  Identities=21%  Similarity=0.339  Sum_probs=121.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc------------c------------
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT------------L------------ 1004 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~------------~------------ 1004 (1310)
                      ..++.|++.||+|||++||+||||||+|||++.  ++.+||+|||+++.......            .            
T Consensus       104 ~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (377)
T cd05629         104 RFYMAECVLAIEAVHKLGFIHRDIKPDNILIDR--GGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAV  181 (377)
T ss_pred             HHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC--CCCEEEeeccccccccccccccccccccccccccccccccccccc
Confidence            345679999999999999999999999999975  45799999999853211000            0            


Q ss_pred             ----------------------cccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhc
Q psy5279        1005 ----------------------IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062 (1310)
Q Consensus      1005 ----------------------~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~ 1062 (1310)
                                            ......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+....+.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~  261 (377)
T cd05629         182 DSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKII  261 (377)
T ss_pred             ccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHH
Confidence                                  0001357899999999999999999999999999999999999999887766665554


Q ss_pred             ccc--ccccccchhccHHHHHHHHHhccCCcch---hcHHhhhCCCcccc
Q psy5279        1063 FVR--YRFEYLFKELTQEATRFLMLIFKHEVDW---ITLANNIDHEFWHV 1107 (1310)
Q Consensus      1063 ~~~--~~f~~~~~~lS~eakdLL~~il~~~~~r---it~~e~L~H~f~~~ 1107 (1310)
                      ...  ..++. ...++.++++||.+|+..+.+|   .++.+++.|+|+..
T Consensus       262 ~~~~~~~~p~-~~~~s~~~~dli~~lL~~~~~r~~r~~~~~~l~hp~~~~  310 (377)
T cd05629         262 NWRETLYFPD-DIHLSVEAEDLIRRLITNAENRLGRGGAHEIKSHPFFRG  310 (377)
T ss_pred             ccCCccCCCC-CCCCCHHHHHHHHHHhcCHhhcCCCCCHHHHhcCCCcCC
Confidence            322  22221 1247899999999999866654   59999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0661|consensus

Probab=99.96  E-value=9.5e-30  Score=293.04  Aligned_cols=111  Identities=23%  Similarity=0.396  Sum_probs=92.0

Q ss_pred             hHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-C
Q psy5279         947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-P 1025 (1310)
Q Consensus       947 ~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ 1025 (1310)
                      ..+-++.||++||+|+|++|+.|||+||||||+..  ...|||+|||+|+.+........  ...|.+|+|||++... .
T Consensus       111 ~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~--~~~iKiaDFGLARev~SkpPYTe--YVSTRWYRAPEvLLrs~~  186 (538)
T KOG0661|consen  111 DIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG--NDVIKIADFGLAREVRSKPPYTE--YVSTRWYRAPEVLLRSGY  186 (538)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcccccCChhheEecc--cceeEecccccccccccCCCcch--hhhcccccchHHhhhccc
Confidence            35667889999999999999999999999999985  45699999999987754332222  2346899999999765 5


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhh
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I 1061 (1310)
                      |+.++|+||+|||++|+.+-++.|.|.++.+...+|
T Consensus       187 Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KI  222 (538)
T KOG0661|consen  187 YSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKI  222 (538)
T ss_pred             cCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHH
Confidence            778999999999999999999999999876655444

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.96  E-value=2.4e-30  Score=292.59  Aligned_cols=103  Identities=30%  Similarity=0.568  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+. ......|++.|+|||++.+..++.
T Consensus       104 ~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  180 (323)
T cd05616         104 VFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENMWDGV-TTKTFCGTPDYIAPEIIAYQPYGK  180 (323)
T ss_pred             HHHHHHHHHHHHHHHHCCEEecCCCHHHeEECC--CCcEEEccCCCceecCCCCC-ccccCCCChhhcCHHHhcCCCCCC
Confidence            345679999999999999999999999999986  45799999999875432221 122345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|||||||++|+|++|..||.+.+.
T Consensus       181 ~~DiwSlGvil~elltg~~Pf~~~~~  206 (323)
T cd05616         181 SVDWWAFGVLLYEMLAGQAPFEGEDE  206 (323)
T ss_pred             ccchhchhHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999977554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0607|consensus

Probab=99.96  E-value=5.2e-30  Score=283.07  Aligned_cols=241  Identities=21%  Similarity=0.329  Sum_probs=194.7

Q ss_pred             eecccCccCCCeeee-ceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEe
Q psy5279         174 VKTRTKPITDAYDFG-DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYET  251 (1310)
Q Consensus       174 ~~~~~~~~~d~Y~i~-~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~  251 (1310)
                      .......|.+.|++. +.||+|+||.|--|+...||.+||||+|.+.....+..+.||++++.+. .|+||++|+++|++
T Consensus        68 ~ss~~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd  147 (463)
T KOG0607|consen   68 TSSLSGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED  147 (463)
T ss_pred             cccccchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence            333445688889886 5699999999999999999999999999887666788899999999988 59999999999999


Q ss_pred             CCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC-CeEEEEeeccce
Q psy5279         252 KDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG-RHLLLTDFGLSR  330 (1310)
Q Consensus       252 ~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~-~~VKLsDFGLAr  330 (1310)
                      +..+|||||-|.||.|+.++.++.+|+|.++..++++|+.||+|||.+||.||||||||||+.+.+. .-||||||.|+.
T Consensus       148 d~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgS  227 (463)
T KOG0607|consen  148 DTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGS  227 (463)
T ss_pred             cceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999986542 369999999988


Q ss_pred             eecCCCC--------CCCcccchHHH------------------------------hhhcCCCccccCCCCCCCCC----
Q psy5279         331 RITSFGK--------LNPLEYDVRYV------------------------------RQALRHPWLNFADRKPTEDT----  368 (1310)
Q Consensus       331 ~i~~~~~--------l~~~~~t~~yv------------------------------~~~~r~P~l~~~~~~~~~~~----  368 (1310)
                      .+...+.        +.+.||+.+|+                              .+.+-.||.+.-+...-.+.    
T Consensus       228 g~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~C  307 (463)
T KOG0607|consen  228 GIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVC  307 (463)
T ss_pred             ccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCcc
Confidence            7654332        23345554443                              34444577554332221111    


Q ss_pred             ---------------CCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecC
Q psy5279         369 ---------------PKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYP  414 (1310)
Q Consensus       369 ---------------p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~  414 (1310)
                                     -+|....+..|.+.++|.++++++++...|+++.+.+.|||.....
T Consensus       308 r~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~  368 (463)
T KOG0607|consen  308 RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA  368 (463)
T ss_pred             HHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence                           2333455556677788989999999999999999999999975443

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.96  E-value=2.5e-30  Score=292.61  Aligned_cols=103  Identities=35%  Similarity=0.571  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.....+. ......|++.|+|||++.+..++.
T Consensus       104 ~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~--~~~~kL~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~  180 (324)
T cd05589         104 VFYAACVVLGLQYLHENKIVYRDLKLDNLLLDT--EGFVKIADFGLCKEGMGFGD-RTSTFCGTPEFLAPEVLTETSYTR  180 (324)
T ss_pred             HHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC--CCcEEeCcccCCccCCCCCC-cccccccCccccCHhHhcCCCCCc
Confidence            445679999999999999999999999999986  45799999998865322211 122345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|||||||++|+|++|..||.+.+.
T Consensus       181 ~~DiwslG~il~el~~G~~pf~~~~~  206 (324)
T cd05589         181 AVDWWGLGVLIYEMLVGESPFPGDDE  206 (324)
T ss_pred             ccchhhHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999976543

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.96  E-value=3.1e-30  Score=291.57  Aligned_cols=103  Identities=30%  Similarity=0.513  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++..... ........|++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (316)
T cd05620          99 TFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDR--DGHIKIADFGMCKENVFG-DNRASTFCGTPDYIAPEILQGLKYTF  175 (316)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEeCccCCCeecccC-CCceeccCCCcCccCHHHHcCCCCCc
Confidence            345679999999999999999999999999985  457999999998643211 11122345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|||||||++|+|++|..||.+.+.
T Consensus       176 ~~DiwslGvil~el~~g~~Pf~~~~~  201 (316)
T cd05620         176 SVDWWSFGVLLYEMLIGQSPFHGDDE  201 (316)
T ss_pred             ccchhhhHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999976543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.96  E-value=1.6e-30  Score=301.54  Aligned_cols=157  Identities=22%  Similarity=0.396  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC---
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP--- 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~--- 1025 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  .+.+||+|||++......+........||+.|+|||++.+..   
T Consensus       145 ~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~--~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~  222 (370)
T cd05621         145 KFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDK--HGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDG  222 (370)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC--CCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCC
Confidence            345679999999999999999999999999975  567999999999766433322223446789999999997643   


Q ss_pred             -CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccCCc---chhcHHhh
Q psy5279        1026 -IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEV---DWITLANN 1099 (1310)
Q Consensus      1026 -ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~---~rit~~e~ 1099 (1310)
                       ++.++|+||+||++|+|++|..||.+.+.......+....  ..++. ...+++.+++++..++..++   .|+++.++
T Consensus       223 ~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~  301 (370)
T cd05621         223 YYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPE-DVEISKHAKNLICAFLTDREVRLGRNGVEEI  301 (370)
T ss_pred             CCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCC-cccCCHHHHHHHHHHccCchhccCCCCHHHH
Confidence             7789999999999999999999999988777766665433  23332 23579999999999987554   37799999


Q ss_pred             hCCCccccc
Q psy5279        1100 IDHEFWHVK 1108 (1310)
Q Consensus      1100 L~H~f~~~~ 1108 (1310)
                      +.|+|+...
T Consensus       302 l~hp~~~~~  310 (370)
T cd05621         302 KQHPFFKND  310 (370)
T ss_pred             hcCcccCCC
Confidence            999998653

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.96  E-value=1e-30  Score=301.65  Aligned_cols=159  Identities=23%  Similarity=0.371  Sum_probs=124.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC--------------------------
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-------------------------- 1002 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g-------------------------- 1002 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  .+.+||+|||++.......                          
T Consensus       104 ~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~--~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (376)
T cd05598         104 RFYIAELTCAIESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEID  181 (376)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECC--CCCEEEEeCCCCccccccccccccccccccccccccccccccccc
Confidence            345679999999999999999999999999975  4579999999874221000                          


Q ss_pred             ----------------cccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccc
Q psy5279        1003 ----------------TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066 (1310)
Q Consensus      1003 ----------------~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~ 1066 (1310)
                                      ........||+.|||||++.+..++.++|||||||++|+|++|..||.+.+..+....+.....
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~  261 (376)
T cd05598         182 RCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWET  261 (376)
T ss_pred             cccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCc
Confidence                            0000123578999999999999999999999999999999999999999887666555443222


Q ss_pred             cccc-cchhccHHHHHHHHHhccCCcchh---cHHhhhCCCcccccc
Q psy5279        1067 RFEY-LFKELTQEATRFLMLIFKHEVDWI---TLANNIDHEFWHVKD 1109 (1310)
Q Consensus      1067 ~f~~-~~~~lS~eakdLL~~il~~~~~ri---t~~e~L~H~f~~~~~ 1109 (1310)
                      .+.. ....++++++++|.+|+.++.+|+   ++.+++.|+|+...+
T Consensus       262 ~~~~~~~~~~s~~~~~li~~l~~~p~~R~~~~t~~ell~h~~~~~~~  308 (376)
T cd05598         262 TLHIPSQAKLSREASDLILRLCCGAEDRLGKNGADEIKAHPFFKGID  308 (376)
T ss_pred             cccCCCCCCCCHHHHHHHHHHhcCHhhcCCCCCHHHHhCCCCcCCCC
Confidence            2221 124689999999999888888999   899999999987543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.96  E-value=4.7e-30  Score=290.93  Aligned_cols=103  Identities=31%  Similarity=0.581  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.....+. ......||+.|+|||++.+..++.
T Consensus       104 ~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~--~~~ikL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  180 (323)
T cd05615         104 VFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDS--EGHIKIADFGMCKEHMVDGV-TTRTFCGTPDYIAPEIIAYQPYGK  180 (323)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEeccccccccCCCCc-cccCccCCccccCHHHHcCCCCCC
Confidence            345679999999999999999999999999986  45699999999865332221 122335789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|+||+||++|+|++|.+||.+.+.
T Consensus       181 ~~DiwslGvil~elltG~~pf~~~~~  206 (323)
T cd05615         181 SVDWWAYGVLLYEMLAGQPPFDGEDE  206 (323)
T ss_pred             ccchhhhHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999987543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.96  E-value=3e-30  Score=287.52  Aligned_cols=105  Identities=23%  Similarity=0.428  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++........ ......+++.|+|||++.+. .++
T Consensus       107 ~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~  183 (301)
T cd07873         107 KLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINE--RGELKLADFGLARAKSIPTK-TYSNEVVTLWYRPPDILLGSTDYS  183 (301)
T ss_pred             HHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECC--CCcEEECcCcchhccCCCCC-cccccceeecccCcHHHhCCCCCc
Confidence            345679999999999999999999999999985  45699999999865432111 11223456899999998764 577


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++|||||||++|+|++|.+||.+.+..+
T Consensus       184 ~~~Dv~slG~~l~el~tg~~~f~~~~~~~  212 (301)
T cd07873         184 TQIDMWGVGCIFYEMSTGRPLFPGSTVEE  212 (301)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            89999999999999999999998765443

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.96  E-value=1.6e-30  Score=300.91  Aligned_cols=159  Identities=24%  Similarity=0.383  Sum_probs=123.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC--------------------------
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-------------------------- 1002 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g-------------------------- 1002 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||++.......                          
T Consensus       104 ~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~--~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (382)
T cd05625         104 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPA  181 (382)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEEeECCCCccccccccccccccccccccccccccccccccc
Confidence            445679999999999999999999999999975  5679999999874321000                          


Q ss_pred             --------------------cccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhc
Q psy5279        1003 --------------------TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062 (1310)
Q Consensus      1003 --------------------~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~ 1062 (1310)
                                          ........||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+..+....+.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~  261 (382)
T cd05625         182 NCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVI  261 (382)
T ss_pred             cccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence                                000012357899999999999999999999999999999999999999887766655544


Q ss_pred             cccccccc-cchhccHHHHHHHHHhccCCcchhc---HHhhhCCCcccccc
Q psy5279        1063 FVRYRFEY-LFKELTQEATRFLMLIFKHEVDWIT---LANNIDHEFWHVKD 1109 (1310)
Q Consensus      1063 ~~~~~f~~-~~~~lS~eakdLL~~il~~~~~rit---~~e~L~H~f~~~~~ 1109 (1310)
                      .....+.. ....++++++++|.+|+.++.+|++   +.+++.|+|+...+
T Consensus       262 ~~~~~~~~p~~~~~s~~~~~li~~l~~~p~~R~~~~~~~ei~~hp~f~~~~  312 (382)
T cd05625         262 NWQTSLHIPPQAKLSPEASDLIIKLCRGPEDRLGKNGADEIKAHPFFKTID  312 (382)
T ss_pred             ccCCCcCCCCcccCCHHHHHHHHHHccCHhHcCCCCCHHHHhcCCCcCCcC
Confidence            32222211 2346799999999998888888887   89999999986533

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0658|consensus

Probab=99.96  E-value=6.9e-30  Score=288.09  Aligned_cols=107  Identities=29%  Similarity=0.492  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      +..+..||.+||.|||+.||+||||||.|+|++.. .+.+||||||.|+.+.......+.+  .|.+|+|||.+.+. .|
T Consensus       127 iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~-tg~LKicDFGSAK~L~~~epniSYi--cSRyYRaPELifga~~Y  203 (364)
T KOG0658|consen  127 IKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPD-TGVLKICDFGSAKVLVKGEPNISYI--CSRYYRAPELIFGATEY  203 (364)
T ss_pred             eHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCC-CCeEEeccCCcceeeccCCCceeEE--EeccccCHHHHcCcccc
Confidence            35567899999999999999999999999999863 4789999999999876543332222  35899999999876 68


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      +.+.||||.||++.||+-|++-|.|++....
T Consensus       204 t~~IDiWSaGCV~aELl~g~plFpG~s~~dQ  234 (364)
T KOG0658|consen  204 TTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ  234 (364)
T ss_pred             CceeEEhhhhHHHHHHhcCCcccCCCCHHHH
Confidence            9999999999999999999999999876554

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.96  E-value=2.6e-30  Score=292.43  Aligned_cols=103  Identities=26%  Similarity=0.483  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++...... .......|++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~l~~lH~~givH~dikp~NIll~~--~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~  175 (323)
T cd05575          99 RFYAAEIASALGYLHSLNIIYRDLKPENILLDS--QGHVVLTDFGLCKEGIEHS-KTTSTFCGTPEYLAPEVLRKQPYDR  175 (323)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC--CCcEEEeccCCCcccccCC-CccccccCChhhcChhhhcCCCCCc
Confidence            345679999999999999999999999999975  4579999999986432211 1122335789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|||||||++|+|++|..||.+.+.
T Consensus       176 ~~DvwslG~il~ell~g~~pf~~~~~  201 (323)
T cd05575         176 TVDWWCLGAVLYEMLYGLPPFYSRDT  201 (323)
T ss_pred             cccccccchhhhhhhcCCCCCCCCCH
Confidence            99999999999999999999976543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=7.2e-30  Score=297.66  Aligned_cols=104  Identities=24%  Similarity=0.389  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++|||||||||+|||++.  ...+||+|||+++....... .......||+.|+|||++.+..|+
T Consensus       188 ~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~--~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  265 (392)
T PHA03207        188 ITIQRRLLEALAYLHGRGIIHRDVKTENIFLDE--PENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYC  265 (392)
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC--CCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCC
Confidence            445779999999999999999999999999985  45699999999876543221 112234578999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      .++|||||||++|+|++|..||.+...
T Consensus       266 ~~~DvwslGvil~el~~g~~pf~~~~~  292 (392)
T PHA03207        266 AKTDIWSAGLVLFEMSVKNVTLFGKQV  292 (392)
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCCCCC
Confidence            999999999999999999999987643

>KOG0667|consensus

Probab=99.96  E-value=8.4e-30  Score=303.62  Aligned_cols=110  Identities=24%  Similarity=0.427  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .+-+.+||+.||.+||+.||||+|||||||||.......|||+|||.|+.....-.    ....+..|+|||++.+.+|+
T Consensus       291 ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy----tYiQSRfYRAPEVILGlpY~  366 (586)
T KOG0667|consen  291 VRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY----TYIQSRFYRAPEVILGLPYD  366 (586)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce----eeeeccccccchhhccCCCC
Confidence            34567899999999999999999999999999876667899999999986543211    22356899999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I 1061 (1310)
                      .+.||||||||++||++|.+.|.|+++.+....|
T Consensus       367 ~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I  400 (586)
T KOG0667|consen  367 TAIDMWSLGCILAELFTGEPLFPGDNEYDQLARI  400 (586)
T ss_pred             CccceeehhhhHHhHhcCccccCCCCHHHHHHHH
Confidence            9999999999999999999999999987765544

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.96  E-value=9.8e-30  Score=291.41  Aligned_cols=90  Identities=19%  Similarity=0.270  Sum_probs=70.7

Q ss_pred             cccCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcc--hhhhhhHHhhhhhhhchhhHHHHHHhcCCCC
Q psy5279         589 WSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD--TLHQVNTEFDNLRSLRHERIASLLEAYKPST  666 (1310)
Q Consensus       589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  666 (1310)
                      ....+..+.|+++..|.+|.||.|.+|..+. +++.||.|++.-.++  ...++..|+..|+.|+|++|..+++.|... 
T Consensus        67 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-  144 (353)
T PLN00034         67 PSAAKSLSELERVNRIGSGAGGTVYKVIHRP-TGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHN-  144 (353)
T ss_pred             CCCCCCHHHHhhhhhccCCCCeEEEEEEECC-CCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC-
Confidence            3444456789999999999999999986654 788999999865443  345678999999999999999988877554 


Q ss_pred             cccchhhHHHHhhcCch
Q psy5279         667 TASNIAVLVMEKLQGAD  683 (1310)
Q Consensus       667 ~~~~~~~~~~~~~~~~~  683 (1310)
                         +...+|||+|.|.+
T Consensus       145 ---~~~~lv~e~~~~~~  158 (353)
T PLN00034        145 ---GEIQVLLEFMDGGS  158 (353)
T ss_pred             ---CeEEEEEecCCCCc
Confidence               44567888887764

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.96  E-value=5.2e-30  Score=290.05  Aligned_cols=101  Identities=30%  Similarity=0.539  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++...... .......|++.|+|||++.+..++.++
T Consensus       101 ~~~qi~~al~~LH~~~ivHrdikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~  177 (316)
T cd05619         101 YAAEIICGLQFLHSKGIVYRDLKLDNILLDT--DGHIKIADFGMCKENMLGD-AKTCTFCGTPDYIAPEILLGQKYNTSV  177 (316)
T ss_pred             HHHHHHHHHHHHHhCCeEeCCCCHHHEEECC--CCCEEEccCCcceECCCCC-CceeeecCCccccCHHHHcCCCCCchh
Confidence            4569999999999999999999999999986  4569999999986532111 111223577999999999999999999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      |+||+||++|+|++|..||.+.+.
T Consensus       178 DvwslG~il~el~~G~~pf~~~~~  201 (316)
T cd05619         178 DWWSFGVLLYEMLIGQSPFHGHDE  201 (316)
T ss_pred             hhhhHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999976543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0597|consensus

Probab=99.96  E-value=5.7e-30  Score=297.70  Aligned_cols=164  Identities=26%  Similarity=0.423  Sum_probs=149.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|.+.+.||+|+||.||||+.+.|.+.||||.+.+...  +..+.+.+|++|++.|+|||||.++++|++...+++|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            468888999999999999999999999999999976543  445568999999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CCC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KLN  339 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l~  339 (1310)
                      ||.| +|+..+...+.++|..++.+..|+..||.|||+++|+|||+||.|||+...  +++|+|||||||.++... .++
T Consensus        82 ~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~--~~~KlcdFg~Ar~m~~~t~vlt  158 (808)
T KOG0597|consen   82 YAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKG--GTLKLCDFGLARAMSTNTSVLT  158 (808)
T ss_pred             hhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCC--CceeechhhhhhhcccCceeee
Confidence            9998 999999999999999999999999999999999999999999999999754  489999999999886544 556


Q ss_pred             CcccchHHHh
Q psy5279         340 PLEYDVRYVR  349 (1310)
Q Consensus       340 ~~~~t~~yv~  349 (1310)
                      ...|||-|++
T Consensus       159 sikGtPlYmA  168 (808)
T KOG0597|consen  159 SIKGTPLYMA  168 (808)
T ss_pred             eccCcccccC
Confidence            6788888886

>KOG0591|consensus

Probab=99.96  E-value=1.5e-29  Score=276.35  Aligned_cols=141  Identities=20%  Similarity=0.282  Sum_probs=118.2

Q ss_pred             HHHHHHHHHHHHHHH--CC--ceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC
Q psy5279         950 YCVTSVLDGLQYLHW--RG--LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs--~g--IVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      -++.|++.||..||+  .+  |+||||||.||+++.  ++.|||+|||+++.+....+. .....|||+||+||++.+.+
T Consensus       128 k~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~--~gvvKLGDfGL~r~l~s~~tf-A~S~VGTPyYMSPE~i~~~~  204 (375)
T KOG0591|consen  128 KYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA--NGVVKLGDFGLGRFLSSKTTF-AHSLVGTPYYMSPERIHESG  204 (375)
T ss_pred             HHHHHHHHHHHHHhccccccceeeccCcchheEEcC--CCceeeccchhHhHhcchhHH-HHhhcCCCcccCHHHHhcCC
Confidence            356799999999999  55  999999999999986  567999999999877644333 33457899999999999999


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccc-hhccHHHHHHHHHhccCCcc-hhc
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF-KELTQEATRFLMLIFKHEVD-WIT 1095 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~-~~lS~eakdLL~~il~~~~~-rit 1095 (1310)
                      |+.++||||+||++|||..-.+||.|++..++.++|..+.+  +..+ ..-|.+...++..|+..+++ |++
T Consensus       205 Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~--~~~p~~~YS~~l~~li~~ci~vd~~~RP~  274 (375)
T KOG0591|consen  205 YNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY--PPLPDEHYSTDLRELINMCIAVDPEQRPD  274 (375)
T ss_pred             CCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC--CCCcHHHhhhHHHHHHHHHccCCcccCCC
Confidence            99999999999999999999999999999999999987754  3333 45688889999988876554 444

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.96  E-value=3.4e-30  Score=298.72  Aligned_cols=157  Identities=22%  Similarity=0.324  Sum_probs=119.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC--------------------------
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-------------------------- 1002 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g-------------------------- 1002 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  .+.+||+|||+++......                          
T Consensus       104 ~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~--~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (381)
T cd05626         104 RFYIAELTLAIESVHKMGFIHRDIKPDNILIDL--DGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVS  181 (381)
T ss_pred             HHHHHHHHHHHHHHHhCCeeecCCcHHHEEECC--CCCEEEeeCcCCcccccccccccccccccccccccCccccccccc
Confidence            445679999999999999999999999999975  4579999999875321000                          


Q ss_pred             --------------------cccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhc
Q psy5279        1003 --------------------TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062 (1310)
Q Consensus      1003 --------------------~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~ 1062 (1310)
                                          ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~  261 (381)
T cd05626         182 NCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVI  261 (381)
T ss_pred             ccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHH
Confidence                                000012357899999999999999999999999999999999999999887666554443


Q ss_pred             ccc--ccccccchhccHHHHHHHHHhccCCc---chhcHHhhhCCCccccc
Q psy5279        1063 FVR--YRFEYLFKELTQEATRFLMLIFKHEV---DWITLANNIDHEFWHVK 1108 (1310)
Q Consensus      1063 ~~~--~~f~~~~~~lS~eakdLL~~il~~~~---~rit~~e~L~H~f~~~~ 1108 (1310)
                      ...  ..++. ...+++++++||.+|+..++   .|.++.+++.|+||...
T Consensus       262 ~~~~~~~~~~-~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         262 NWENTLHIPP-QVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             ccccccCCCC-CCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence            221  22221 23578999999998765332   48899999999998643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0658|consensus

Probab=99.96  E-value=6.4e-30  Score=288.33  Aligned_cols=171  Identities=26%  Similarity=0.356  Sum_probs=142.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-----eEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-----SFT  256 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-----~ly  256 (1310)
                      .-.|.-.+.+|+|+||.||+|...++++.||||.+....    +.-.+|+.||+.++|||||+|..+|....     .+.
T Consensus        23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln   98 (364)
T KOG0658|consen   23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN   98 (364)
T ss_pred             EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence            345677899999999999999999999999999885432    22347999999999999999998886432     345


Q ss_pred             EEEecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         257 IISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ||||||+. +|.+.+..    +..++..+++.|++||++||.|||+.||+||||||+|||+|.+. +.+||||||-||++
T Consensus        99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~t-g~LKicDFGSAK~L  176 (364)
T KOG0658|consen   99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDT-GVLKICDFGSAKVL  176 (364)
T ss_pred             HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCC-CeEEeccCCcceee
Confidence            89999986 67666653    45699999999999999999999999999999999999999764 58999999999999


Q ss_pred             cCCCCCCCcccchHHHhhhcCCCccccCCCC
Q psy5279         333 TSFGKLNPLEYDVRYVRQALRHPWLNFADRK  363 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv~~~~r~P~l~~~~~~  363 (1310)
                      ...+...+..     +++.||+|++.|+..+
T Consensus       177 ~~~epniSYi-----cSRyYRaPELifga~~  202 (364)
T KOG0658|consen  177 VKGEPNISYI-----CSRYYRAPELIFGATE  202 (364)
T ss_pred             ccCCCceeEE-----EeccccCHHHHcCccc
Confidence            7765543322     6789999999998444

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.96  E-value=8e-30  Score=288.24  Aligned_cols=101  Identities=31%  Similarity=0.539  Sum_probs=85.0

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++...... .......||+.|+|||++.+..++.++
T Consensus       101 ~~~qi~~al~~LH~~~ivH~dlkp~Nill~~--~~~~kL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~  177 (316)
T cd05592         101 YAAEIICGLQFLHKKGIIYRDLKLDNVLLDK--DGHIKIADFGMCKENMNGE-GKASTFCGTPDYIAPEILKGQKYNESV  177 (316)
T ss_pred             HHHHHHHHHHHHHHCCEEeCCCCHHHeEECC--CCCEEEccCcCCeECCCCC-CccccccCCccccCHHHHcCCCCCCcc
Confidence            4569999999999999999999999999975  4579999999987543221 122234578999999999999999999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      |||||||++|+|++|..||.+.+.
T Consensus       178 DvwslG~il~ell~G~~Pf~~~~~  201 (316)
T cd05592         178 DWWSFGVLLYEMLIGQSPFHGEDE  201 (316)
T ss_pred             cchhHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999987643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=2.4e-30  Score=291.65  Aligned_cols=100  Identities=26%  Similarity=0.465  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++........ ......|++.|+|||++.+..++.
T Consensus       101 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~  177 (318)
T cd05582         101 KFYLAELALALDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKESIDHEK-KAYSFCGTVEYMAPEVVNRRGHTQ  177 (318)
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCCHHHeEECC--CCcEEEeeccCCcccCCCCC-ceecccCChhhcCHHHHcCCCCCC
Confidence            344669999999999999999999999999975  45699999998865432211 111234567777777766655666


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ++|||||||++|+|++|..||.+
T Consensus       178 ~~DiwslG~il~el~tg~~p~~~  200 (318)
T cd05582         178 SADWWSFGVLMFEMLTGSLPFQG  200 (318)
T ss_pred             ccceeccceEeeeeccCCCCCCC
Confidence            66666666666666666666643

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.96  E-value=4.5e-30  Score=297.44  Aligned_cols=156  Identities=23%  Similarity=0.387  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC----C
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE----P 1025 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~----~ 1025 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++......+........||+.|+|||++.+.    .
T Consensus       146 ~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~--~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  223 (370)
T cd05596         146 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK--SGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGY  223 (370)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCHHHEEEcC--CCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCC
Confidence            34569999999999999999999999999975  56799999999876543332222344678999999998754    3


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccCCcc---hhcHHhhh
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEVD---WITLANNI 1100 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~~---rit~~e~L 1100 (1310)
                      ++.++|+|||||++|+|++|.+||.+.+.......+....  ..++. ...+|.++++||..||..+++   |+++.+++
T Consensus       224 ~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell  302 (370)
T cd05596         224 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPD-DIEISKQAKDLICAFLTDREVRLGRNGVDEIK  302 (370)
T ss_pred             CCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCC-cCCCCHHHHHHHHHHccChhhccCCCCHHHHh
Confidence            7789999999999999999999999988877777665433  23332 235799999999999976554   78999999


Q ss_pred             CCCccccc
Q psy5279        1101 DHEFWHVK 1108 (1310)
Q Consensus      1101 ~H~f~~~~ 1108 (1310)
                      .|+|+...
T Consensus       303 ~h~~~~~~  310 (370)
T cd05596         303 SHPFFKND  310 (370)
T ss_pred             cCcccCCC
Confidence            99998754

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.96  E-value=5.7e-30  Score=291.01  Aligned_cols=100  Identities=28%  Similarity=0.489  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  .+.+||+|||+++.....+. ......||+.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~--~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  175 (329)
T cd05588          99 RFYSAEISLALNFLHERGIIYRDLKLDNVLLDA--EGHIKLTDYGMCKEGIRPGD-TTSTFCGTPNYIAPEILRGEDYGF  175 (329)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEECcCccccccccCCC-ccccccCCccccCHHHHcCCCCCC
Confidence            345679999999999999999999999999975  45799999999864322111 112335789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ++|+|||||++|+|++|..||..
T Consensus       176 ~~DiwslG~~l~el~~g~~Pf~~  198 (329)
T cd05588         176 SVDWWALGVLMFEMMAGRSPFDI  198 (329)
T ss_pred             ccceechHHHHHHHHHCCCCccc
Confidence            99999999999999999999953

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.6e-30  Score=292.09  Aligned_cols=153  Identities=24%  Similarity=0.434  Sum_probs=122.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  .+.+||+|||++.....    ......|++.|+|||++.+..++.
T Consensus       104 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~kL~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~  177 (333)
T cd05600         104 RFYMAEMFEAVDALHELGYIHRDLKPENFLIDA--SGHIKLTDFGLSKGIVT----YANSVVGSPDYMAPEVLRGKGYDF  177 (333)
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCCEEEEeCcCCccccc----ccCCcccCccccChhHhcCCCCCC
Confidence            345679999999999999999999999999975  45799999999875432    112335779999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccccc--cccc---chhccHHHHHHHHHhccCCc-chhcHHhhhCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR--FEYL---FKELTQEATRFLMLIFKHEV-DWITLANNIDH 1102 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~--f~~~---~~~lS~eakdLL~~il~~~~-~rit~~e~L~H 1102 (1310)
                      ++|||||||++|+|++|..||.+.+..+....+......  .+..   ...+++++.+||.+|+..++ +|.++.+++.|
T Consensus       178 ~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         178 TVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             ccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            999999999999999999999998877766555432211  1211   12568999999999887654 56799999999


Q ss_pred             Ccccc
Q psy5279        1103 EFWHV 1107 (1310)
Q Consensus      1103 ~f~~~ 1107 (1310)
                      +|+..
T Consensus       258 ~~~~~  262 (333)
T cd05600         258 PFFKE  262 (333)
T ss_pred             cccCC
Confidence            99874

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.96  E-value=2.3e-30  Score=292.87  Aligned_cols=157  Identities=23%  Similarity=0.424  Sum_probs=125.7

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc------C
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA------E 1023 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~------~ 1023 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  .+.+||+|||++...............|++.|+|||++.      .
T Consensus       106 ~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~--~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  183 (330)
T cd05601         106 FYLAELVLAIHSVHQMGYVHRDIKPENVLIDR--TGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGK  183 (330)
T ss_pred             HHHHHHHHHHHHHHHCCeEcccCchHheEECC--CCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhcccccccc
Confidence            34679999999999999999999999999985  457999999999766443332223345789999999987      4


Q ss_pred             CCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccCCcchhcHHhhhC
Q psy5279        1024 EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEVDWITLANNID 1101 (1310)
Q Consensus      1024 ~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~ 1101 (1310)
                      ..++.++|||||||++|+|++|..||.+.+......++....  ..++. ...+++++++||..|+.++.+|+++.+++.
T Consensus       184 ~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~li~~ll~~p~~R~t~~~l~~  262 (330)
T cd05601         184 GTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPE-DPKVSSDFLDLIQSLLCGQKERLGYEGLCC  262 (330)
T ss_pred             CCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCC-CCCCCHHHHHHHHHHccChhhCCCHHHHhC
Confidence            567889999999999999999999999887766666554322  12222 235789999999999998889999999999


Q ss_pred             CCcccccc
Q psy5279        1102 HEFWHVKD 1109 (1310)
Q Consensus      1102 H~f~~~~~ 1109 (1310)
                      |+|+...+
T Consensus       263 h~~~~~~~  270 (330)
T cd05601         263 HPFFSKID  270 (330)
T ss_pred             CCCcCCCC
Confidence            99987533

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=6.6e-30  Score=290.68  Aligned_cols=158  Identities=25%  Similarity=0.437  Sum_probs=124.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-----
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE----- 1023 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~----- 1023 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||++...............|++.|||||++..     
T Consensus       105 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  182 (331)
T cd05597         105 RFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK--NGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGK  182 (331)
T ss_pred             HHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC--CCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccc
Confidence            345679999999999999999999999999975  4579999999987654333322233457899999999973     


Q ss_pred             CCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccCCcc---hhcHHh
Q psy5279        1024 EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEVD---WITLAN 1098 (1310)
Q Consensus      1024 ~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~~---rit~~e 1098 (1310)
                      ..++.++|||||||++|+|++|..||.+.+..+....+....  +.++.....+++++++|+.+|+..+.+   |.++.+
T Consensus       183 ~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~  262 (331)
T cd05597         183 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQD  262 (331)
T ss_pred             cCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence            457789999999999999999999999887776665554322  334444456899999999988865443   679999


Q ss_pred             hhCCCccccc
Q psy5279        1099 NIDHEFWHVK 1108 (1310)
Q Consensus      1099 ~L~H~f~~~~ 1108 (1310)
                      ++.|+||...
T Consensus       263 ~l~hp~~~~~  272 (331)
T cd05597         263 FKDHPFFEGI  272 (331)
T ss_pred             HhcCCCCCCC
Confidence            9999998653

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.96  E-value=2.3e-29  Score=286.74  Aligned_cols=100  Identities=23%  Similarity=0.416  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHHC-CceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~-gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.||+.||.|||++ +|+||||||+|||++.  .+.+||+|||++......   ......|++.|+|||++.+..++.
T Consensus       107 ~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~--~~~~kL~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~  181 (333)
T cd06650         107 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSV  181 (333)
T ss_pred             HHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC--CCCEEEeeCCcchhhhhh---ccccCCCCccccCHHHhcCCCCCc
Confidence            3456899999999985 7999999999999975  456999999998654321   112235678999999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|+|||||++|+|++|..||.....
T Consensus       182 ~~DvwslG~il~~l~~g~~p~~~~~~  207 (333)
T cd06650         182 QSDIWSMGLSLVEMAIGRYPIPPPDA  207 (333)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCcch
Confidence            99999999999999999999976544

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.96  E-value=2.8e-30  Score=296.61  Aligned_cols=158  Identities=23%  Similarity=0.398  Sum_probs=124.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-------------------------
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT------------------------- 1003 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~------------------------- 1003 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  .+.+||+|||++........                         
T Consensus       104 ~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~--~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (360)
T cd05627         104 QFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDA--KGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRK  181 (360)
T ss_pred             HHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC--CCCEEEeeccCCcccccccccccccccccCCcccccccccccccc
Confidence            445679999999999999999999999999975  56799999999864321100                         


Q ss_pred             ---------ccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccc
Q psy5279        1004 ---------LIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLF 1072 (1310)
Q Consensus      1004 ---------~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~ 1072 (1310)
                               .......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+....+....  ..++.. 
T Consensus       182 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-  260 (360)
T cd05627         182 AETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPE-  260 (360)
T ss_pred             cccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCC-
Confidence                     00112357899999999999999999999999999999999999999988877766665422  223321 


Q ss_pred             hhccHHHHHHHHHhccCCcchh---cHHhhhCCCcccccc
Q psy5279        1073 KELTQEATRFLMLIFKHEVDWI---TLANNIDHEFWHVKD 1109 (1310)
Q Consensus      1073 ~~lS~eakdLL~~il~~~~~ri---t~~e~L~H~f~~~~~ 1109 (1310)
                      ..+++++++||.+++.++.+|+   ++.+++.|+||...+
T Consensus       261 ~~~s~~~~~li~~l~~~p~~R~~~~~~~ei~~hp~f~~~~  300 (360)
T cd05627         261 VPISEKAKDLILRFCTDSENRIGSNGVEEIKSHPFFEGVD  300 (360)
T ss_pred             CCCCHHHHHHHHHhccChhhcCCCCCHHHHhcCCCCCCCC
Confidence            2478999999998887777777   478999999987644

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0586|consensus

Probab=99.96  E-value=5e-29  Score=294.72  Aligned_cols=232  Identities=23%  Similarity=0.302  Sum_probs=187.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .....|.+.+.||+|.||+|.+|++..||..||||+|.+...  ..+..+.+|+++|+.|+|||||+|+.+++++..+|+
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl  132 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL  132 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence            455789999999999999999999999999999999987543  234558899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      ||||+.||++++++.+.+.+.|.+++.++.|+..|++|||+++|||||||++||||+.+  +.|||+|||++..+.....
T Consensus       133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~--mnikIaDfgfS~~~~~~~~  210 (596)
T KOG0586|consen  133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDEN--MNIKIADFGFSTFFDYGLM  210 (596)
T ss_pred             EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccc--cceeeeccccceeeccccc
Confidence            99999999999999999999999999999999999999999999999999999999754  4799999999999998889


Q ss_pred             CCCcccchHHHhhh------cCCCccccC-----------CCCCCC--CCCCcchhhhhhhcc-------cchhhchhhh
Q psy5279         338 LNPLEYDVRYVRQA------LRHPWLNFA-----------DRKPTE--DTPKLNTDALRNYYN-------LYKDWYGNAA  391 (1310)
Q Consensus       338 l~~~~~t~~yv~~~------~r~P~l~~~-----------~~~~~~--~~p~~~~~~~~~~~~-------~~~D~~~~~~  391 (1310)
                      +.+.||++.|+++.      |-.|++..-           ...|..  ..+.+....++.-|.       ..++.+.+.+
T Consensus       211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~l  290 (596)
T KOG0586|consen  211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKFL  290 (596)
T ss_pred             ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHHHhh
Confidence            99999999998753      222321111           111111  122333333332221       1245555566


Q ss_pred             hhhcccCCCCCCccCCCcceec
Q psy5279         392 VRRYYRRRPLNSCYTHPSRMIY  413 (1310)
Q Consensus       392 l~~~~~r~~~~~cl~hpw~~~~  413 (1310)
                      +....+|.|.++.-.|.|+...
T Consensus       291 vl~Pskr~~~dqim~~~W~n~~  312 (596)
T KOG0586|consen  291 VLNPSKRGPCDQIMKDRWRNDL  312 (596)
T ss_pred             ccCccccCCHHHhhhhcccchh
Confidence            7778899999999999998543

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.96  E-value=5.2e-30  Score=290.14  Aligned_cols=103  Identities=25%  Similarity=0.493  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++....... ......|++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~--~~~~kl~DfG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  175 (325)
T cd05602          99 RFYAAEIASALGYLHSLNIVYRDLKPENILLDS--QGHIVLTDFGLCKENIEHNG-TTSTFCGTPEYLAPEVLHKQPYDR  175 (325)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEEccCCCCcccccCCC-CcccccCCccccCHHHHcCCCCCC
Confidence            345679999999999999999999999999975  45799999999865322111 122345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|||||||++|+|++|.+||.+.+.
T Consensus       176 ~~DiwslG~il~el~~g~~pf~~~~~  201 (325)
T cd05602         176 TVDWWCLGAVLYEMLYGLPPFYSRNT  201 (325)
T ss_pred             ccccccccHHHHHHhcCCCCCCCCCH
Confidence            99999999999999999999976543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0662|consensus

Probab=99.96  E-value=1.1e-29  Score=262.76  Aligned_cols=206  Identities=26%  Similarity=0.408  Sum_probs=167.7

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC--CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~--~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      +.|...++||+|.||+||+|+.+.|++.||+|.++..  .........|||.+|+.|.|.|||+|+++...+..+.||+|
T Consensus         2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe   81 (292)
T KOG0662|consen    2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_pred             cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence            4577788999999999999999999999999998754  33556778899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC
Q psy5279         261 LAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN  339 (1310)
Q Consensus       261 y~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~  339 (1310)
                      ||.. +|..+... .+.+....++.+|.|++.||.|||+++++||||||+|+||+.+|  .+|++||||||...-    .
T Consensus        82 ~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ng--elkladfglarafgi----p  154 (292)
T KOG0662|consen   82 FCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNG--ELKLADFGLARAFGI----P  154 (292)
T ss_pred             HhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCC--cEEecccchhhhcCC----c
Confidence            9975 44433332 35588899999999999999999999999999999999998766  899999999997743    2


Q ss_pred             CcccchHHHhhhcCCCccccCCCC----------------------CCCCCCCcchhhhhhhcccc----hh-hchhhhh
Q psy5279         340 PLEYDVRYVRQALRHPWLNFADRK----------------------PTEDTPKLNTDALRNYYNLY----KD-WYGNAAV  392 (1310)
Q Consensus       340 ~~~~t~~yv~~~~r~P~l~~~~~~----------------------~~~~~p~~~~~~~~~~~~~~----~D-~~~~~~l  392 (1310)
                      .-|++.+.|++|||.|-+.|+...                      |+++ +.--.+|+..||..+    +| |++...+
T Consensus       155 vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfp-g~dvddqlkrif~~lg~p~ed~wps~t~l  233 (292)
T KOG0662|consen  155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP-GNDVDDQLKRIFRLLGTPTEDQWPSMTKL  233 (292)
T ss_pred             eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCC-CCcHHHHHHHHHHHhCCCccccCCccccC
Confidence            348899999999999998888432                      3332 222346777776544    44 7777766


Q ss_pred             hhcc
Q psy5279         393 RRYY  396 (1310)
Q Consensus       393 ~~~~  396 (1310)
                      +++.
T Consensus       234 pdyk  237 (292)
T KOG0662|consen  234 PDYK  237 (292)
T ss_pred             CCCc
Confidence            6643

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.96  E-value=1.1e-29  Score=287.05  Aligned_cols=102  Identities=33%  Similarity=0.622  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++....... ......|++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~  175 (318)
T cd05570          99 RFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDS--EGHIKIADFGMCKEGILGGV-TTSTFCGTPDYIAPEILSYQPYGP  175 (318)
T ss_pred             HHHHHHHHHHHHHHHhCCeEccCCCHHHeEECC--CCcEEecccCCCeecCcCCC-cccceecCccccCHHHhcCCCCCc
Confidence            345679999999999999999999999999986  45799999999864321111 112234679999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|+|||||++|+|++|..||.+.+
T Consensus       176 ~~DiwslGvil~~l~~G~~pf~~~~  200 (318)
T cd05570         176 AVDWWALGVLLYEMLAGQSPFEGDD  200 (318)
T ss_pred             chhhhhHHHHHHHHhhCCCCCCCCC
Confidence            9999999999999999999997654

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.96  E-value=9.6e-30  Score=289.15  Aligned_cols=159  Identities=22%  Similarity=0.428  Sum_probs=127.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc-----C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA-----E 1023 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~-----~ 1023 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||++......+........||+.|+|||++.     .
T Consensus       105 ~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~--~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  182 (332)
T cd05623         105 RFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM--NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGK  182 (332)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC--CCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCC
Confidence            445679999999999999999999999999975  457999999998765433333333456789999999986     3


Q ss_pred             CCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccCCcc---hhcHHh
Q psy5279        1024 EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEVD---WITLAN 1098 (1310)
Q Consensus      1024 ~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~~---rit~~e 1098 (1310)
                      ..++.++|||||||++|+|++|..||.+.+..+....+....  ..++.....+++++++|+.+|+..+++   |.++.+
T Consensus       183 ~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~  262 (332)
T cd05623         183 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIED  262 (332)
T ss_pred             CCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHH
Confidence            457889999999999999999999999988877777665443  334444567899999999998876554   467899


Q ss_pred             hhCCCcccccc
Q psy5279        1099 NIDHEFWHVKD 1109 (1310)
Q Consensus      1099 ~L~H~f~~~~~ 1109 (1310)
                      ++.|+|+...+
T Consensus       263 ~~~h~~f~~~~  273 (332)
T cd05623         263 FKQHPFFTGID  273 (332)
T ss_pred             HhCCCCcCCCC
Confidence            99999987544

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.96  E-value=2.8e-29  Score=275.78  Aligned_cols=100  Identities=21%  Similarity=0.338  Sum_probs=80.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.  +..+||+|||+++....... ......+++.|+|||++.+. .++
T Consensus       102 ~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  178 (284)
T cd07839         102 KSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINK--NGELKLADFGLARAFGIPVR-CYSAEVVTLWYRPPDVLFGAKLYS  178 (284)
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcC--CCcEEECccchhhccCCCCC-CcCCCccccCCcChHHHhCCcccC
Confidence            345679999999999999999999999999985  45699999999875432211 11223456889999998765 478


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      .++|||||||++|+|++|..||..
T Consensus       179 ~~~DiwslG~il~~l~tg~~p~~~  202 (284)
T cd07839         179 TSIDMWSAGCIFAELANAGRPLFP  202 (284)
T ss_pred             cHHHHHHHHHHHHHHHhcCCCCcC
Confidence            899999999999999998888643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0611|consensus

Probab=99.96  E-value=1.3e-29  Score=285.30  Aligned_cols=250  Identities=22%  Similarity=0.424  Sum_probs=213.1

Q ss_pred             CcchhhhhhccccchhhhHHHHhhccccceeeeecccC----cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS----HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      ..|.|..-+-.|.||-|-+|.|.. .+..||.|.+.-+    ..++..+..|.+.+.+|.|++|.++.|.|...    .-
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~-sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENk----dK  127 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHK-SGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENK----DK  127 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhcc-CCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCC----ce
Confidence            469999999999999999999977 8999999998643    34566788999999999999999999999877    56


Q ss_pred             hhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccccccccc
Q psy5279         672 AVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWE  751 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  751 (1310)
                      .|+||||..|.|+..|+|.|...+|.+                                                     
T Consensus       128 IvivMEYaS~GeLYDYiSer~~LsErE-----------------------------------------------------  154 (668)
T KOG0611|consen  128 IVIVMEYASGGELYDYISERGSLSERE-----------------------------------------------------  154 (668)
T ss_pred             EEEEEEecCCccHHHHHHHhccccHHH-----------------------------------------------------
Confidence            799999999999999988877665532                                                     


Q ss_pred             CCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcchh
Q psy5279         752 DNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVI  831 (1310)
Q Consensus       752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  831 (1310)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (668)
T KOG0611|consen  155 --------------------------------------------------------------------------------  154 (668)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEE
Q psy5279         832 RERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKL  911 (1310)
Q Consensus       832 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l  911 (1310)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (668)
T KOG0611|consen  155 --------------------------------------------------------------------------------  154 (668)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEe
Q psy5279         912 EMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLID  991 (1310)
Q Consensus       912 ~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~D  991 (1310)
                                                          ++.+|+||++|+.|||+++++|||||.+|||++.  ++.+||+|
T Consensus       155 ------------------------------------aRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~--N~NiKIAD  196 (668)
T KOG0611|consen  155 ------------------------------------ARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQ--NNNIKIAD  196 (668)
T ss_pred             ------------------------------------HHHHHHHHHHHHHHHhhccceecccchhheeecC--CCCeeeec
Confidence                                                3445789999999999999999999999999986  45699999


Q ss_pred             eccceeeccCCcccccCCCCCCcccccccccCCCCC-CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccc
Q psy5279         992 LGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070 (1310)
Q Consensus       992 FGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys-~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~ 1070 (1310)
                      ||++-......-.  ..++|+|.|.+||++.+.+|. +.+|.|||||+||.|..|..||.|.+...+..+|..+.|+-|.
T Consensus       197 FGLSNly~~~kfL--qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~  274 (668)
T KOG0611|consen  197 FGLSNLYADKKFL--QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE  274 (668)
T ss_pred             cchhhhhccccHH--HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC
Confidence            9998766543333  345678999999999999996 7799999999999999999999999999999999999887764


Q ss_pred             cchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccc
Q psy5279        1071 LFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1071 ~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~ 1107 (1310)
                          -+.+|.-||+.||..+++|+...+.+..+||..
T Consensus       275 ----~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  275 ----TPSDASGLIRWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             ----CCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence                356788999998887777766666677789865

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.96  E-value=5.9e-29  Score=282.69  Aligned_cols=165  Identities=24%  Similarity=0.433  Sum_probs=146.0

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .+.|++.+.||+|+||.||+|.++.+|+.||+|++....   ....+.+.+|+.+|+.++|||||++++++..++.+|+|
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   96 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL   96 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence            467999999999999999999999999999999997532   22345678999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      |||+.||+|.+.+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++.....  .
T Consensus        97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~kl~Dfg~~~~~~~~--~  172 (329)
T PTZ00263         97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG--HVKVTDFGFAKKVPDR--T  172 (329)
T ss_pred             EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC--CEEEeeccCceEcCCC--c
Confidence            99999999999998888899999999999999999999999999999999999998665  7999999999977543  2


Q ss_pred             CCcccchHHHhh
Q psy5279         339 NPLEYDVRYVRQ  350 (1310)
Q Consensus       339 ~~~~~t~~yv~~  350 (1310)
                      .+.++|+.|+++
T Consensus       173 ~~~~gt~~y~aP  184 (329)
T PTZ00263        173 FTLCGTPEYLAP  184 (329)
T ss_pred             ceecCChhhcCH
Confidence            345677777654

>KOG0594|consensus

Probab=99.96  E-value=1.2e-29  Score=285.96  Aligned_cols=107  Identities=26%  Similarity=0.410  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      ...+++||+.||+|||++||+||||||+|||++.  .+.+||+|||+|+...-.... .....+|..|+|||++.+. .|
T Consensus       122 ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~--~G~lKlaDFGlAra~~ip~~~-yt~evvTlWYRaPEvLlGs~~Y  198 (323)
T KOG0594|consen  122 IKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS--SGVLKLADFGLARAFSIPMRT-YTPEVVTLWYRAPEVLLGSTSY  198 (323)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecccCCcceEEECC--CCcEeeeccchHHHhcCCccc-ccccEEEeeccCHHHhcCCCcC
Confidence            4566889999999999999999999999999987  677999999999855422111 1122346789999999988 68


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      +..+||||+|||++||+++++-|.|.++.+.
T Consensus       199 s~~vDiWs~GcIfaEm~~~~~LFpG~se~~q  229 (323)
T KOG0594|consen  199 STSVDIWSLGCIFAEMFTRRPLFPGDSEIDQ  229 (323)
T ss_pred             CCCcchHhHHHHHHHHHhCCCCCCCCcHHHH
Confidence            9999999999999999999999999887443

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.96  E-value=5.9e-30  Score=289.72  Aligned_cols=102  Identities=25%  Similarity=0.468  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++...... .......|++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~--~~~~kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~  175 (325)
T cd05604          99 RFYAAEIASALGYLHSINIVYRDLKPENILLDS--QGHVVLTDFGLCKEGIAQS-DTTTTFCGTPEYLAPEVIRKQPYDN  175 (325)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEEeecCCcccCCCCC-CCcccccCChhhCCHHHHcCCCCCC
Confidence            345679999999999999999999999999986  4579999999986432111 1122345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|||||||++|+|++|..||.+.+
T Consensus       176 ~~DvwslG~il~el~~G~~pf~~~~  200 (325)
T cd05604         176 TVDWWCLGAVLYEMLYGLPPFYCRD  200 (325)
T ss_pred             cCccccccceehhhhcCCCCCCCCC
Confidence            9999999999999999999997654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.96  E-value=6.9e-30  Score=290.54  Aligned_cols=159  Identities=23%  Similarity=0.433  Sum_probs=126.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-----
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE----- 1023 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~----- 1023 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||++...............|++.|+|||++.+     
T Consensus       105 ~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  182 (331)
T cd05624         105 RFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM--NGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGM  182 (331)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC--CCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCC
Confidence            345679999999999999999999999999975  4569999999987664433322333467899999999876     


Q ss_pred             CCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccCCcch---hcHHh
Q psy5279        1024 EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEVDW---ITLAN 1098 (1310)
Q Consensus      1024 ~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~~r---it~~e 1098 (1310)
                      ..++.++|+|||||++|+|++|..||.+.+..+....+....  ..++.....++.++++++.+|+..+++|   .++.+
T Consensus       183 ~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~  262 (331)
T cd05624         183 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIED  262 (331)
T ss_pred             CCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHH
Confidence            457889999999999999999999999888777766665433  3344445668999999999988765554   57899


Q ss_pred             hhCCCcccccc
Q psy5279        1099 NIDHEFWHVKD 1109 (1310)
Q Consensus      1099 ~L~H~f~~~~~ 1109 (1310)
                      .+.|+||...+
T Consensus       263 ~~~h~~f~~~~  273 (331)
T cd05624         263 FKKHAFFEGID  273 (331)
T ss_pred             HhcCCCcCCCC
Confidence            99999987543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG4717|consensus

Probab=99.96  E-value=3.2e-29  Score=288.13  Aligned_cols=230  Identities=23%  Similarity=0.326  Sum_probs=190.0

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~--~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .+..-|.+.+.||+|.|++|.+|++.-||..||||+|.+.+..  ....+.+|+..|+-++|||||+||++..+...+||
T Consensus        15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyL   94 (864)
T KOG4717|consen   15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYL   94 (864)
T ss_pred             ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEE
Confidence            5677899999999999999999999999999999999876543  34457789999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         258 ISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |+|+-.||+|++++.++. .+.|.-++.|++||+.|+.|||...+|||||||||+.+-..- +.|||+|||++..+.+..
T Consensus        95 iLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKl-GlVKLTDFGFSNkf~PG~  173 (864)
T KOG4717|consen   95 ILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKL-GLVKLTDFGFSNKFQPGK  173 (864)
T ss_pred             EEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeec-CceEeeeccccccCCCcc
Confidence            999999999999998764 599999999999999999999999999999999999987654 479999999999999999


Q ss_pred             CCCCcccchHHHhhhcCCCccccCCCCCCCC----------------CCCc----chhhhhhh-----------cccchh
Q psy5279         337 KLNPLEYDVRYVRQALRHPWLNFADRKPTED----------------TPKL----NTDALRNY-----------YNLYKD  385 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~----------------~p~~----~~~~~~~~-----------~~~~~D  385 (1310)
                      .+++.||...|-     +|+++++|.+....                .|+|    +-+.+-.|           ....+|
T Consensus       174 kL~TsCGSLAYS-----APEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrd  248 (864)
T KOG4717|consen  174 KLTTSCGSLAYS-----APEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRD  248 (864)
T ss_pred             hhhcccchhhcc-----CchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHH
Confidence            999999986654     46666665542211                1112    11112111           123367


Q ss_pred             hchhhhhhhcccCCCCCCccCCCcceecCC
Q psy5279         386 WYGNAAVRRYYRRRPLNSCYTHPSRMIYPP  415 (1310)
Q Consensus       386 ~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~  415 (1310)
                      .+..-++++..+|-++.++..|+|+...-+
T Consensus       249 LI~sMLvRdPkkRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  249 LIQSMLVRDPKKRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             HHHHHHhcCchhhccHHHHhccccccCCCC
Confidence            777778899999999999999999855443

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.96  E-value=1.8e-29  Score=279.35  Aligned_cols=102  Identities=25%  Similarity=0.463  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      +..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++........ ......|++.|+|||++.+..++
T Consensus        99 ~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~  175 (280)
T cd05608          99 ACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDN--DGNVRISDLGLAVELKDGQS-KTKGYAGTPGFMAPELLQGEEYD  175 (280)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEeeCccceecCCCCc-cccccCCCcCccCHHHhcCCCCC
Confidence            3456789999999999999999999999999975  45699999999876543221 12233577999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|+|||||++|+|++|..||...
T Consensus       176 ~~~DvwslG~il~el~~g~~pf~~~  200 (280)
T cd05608         176 FSVDYFALGVTLYEMIAARGPFRAR  200 (280)
T ss_pred             ccccHHHHHHHHHHHHhCCCCCCCC
Confidence            9999999999999999999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=1.9e-29  Score=301.70  Aligned_cols=101  Identities=25%  Similarity=0.407  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++|||||||||+|||++.  ...+||+|||+++....... .......||+.|+|||++.+..++
T Consensus       263 ~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~--~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~  340 (461)
T PHA03211        263 TAVARQLLSAIDYIHGEGIIHRDIKTENVLVNG--PEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYT  340 (461)
T ss_pred             HHHHHHHHHHHHHHHHCCEEECcCCHHHEEECC--CCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCC
Confidence            446789999999999999999999999999975  45699999999876532211 112234578999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      .++|||||||++|+|++|..|+.+
T Consensus       341 ~~sDvwSlGviL~El~~g~~~lf~  364 (461)
T PHA03211        341 PSVDIWSAGLVIFEAAVHTASLFS  364 (461)
T ss_pred             chHHHHHHHHHHHHHHHcCCCccc
Confidence            999999999999999998876543

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.96  E-value=1.8e-29  Score=287.30  Aligned_cols=99  Identities=30%  Similarity=0.519  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+. ......|++.|+|||++.+..++.
T Consensus        99 ~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~--~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  175 (329)
T cd05618          99 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGD-TTSTFCGTPNYIAPEILRGEDYGF  175 (329)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC--CCCEEEeeCCccccccCCCC-ccccccCCccccCHHHHcCCCCCC
Confidence            345679999999999999999999999999975  45799999999865322111 112345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      ++|+|||||++|+|++|..||.
T Consensus       176 ~~DiwslG~il~el~~g~~Pf~  197 (329)
T cd05618         176 SVDWWALGVLMFEMMAGRSPFD  197 (329)
T ss_pred             ccceecccHHHHHHhhCCCCCc
Confidence            9999999999999999999995

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.96  E-value=2.7e-28  Score=280.89  Aligned_cols=149  Identities=26%  Similarity=0.467  Sum_probs=136.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|++.+.||+|+||+||+|.++.+|+.||+|++.+..   ......+.+|+.+|+.++||||+++++.+.+.+.+||||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            46899999999999999999999999999999997532   123345788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |||+||+|.+.+.+.+.+++.+++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+.
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~--~vkL~DFGla~~~~  152 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKG--HVKLSDFGLCTGLK  152 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--CEEEeeccCccccc
Confidence            9999999999998888899999999999999999999999999999999999998655  79999999998654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0610|consensus

Probab=99.96  E-value=1.4e-28  Score=280.20  Aligned_cols=267  Identities=19%  Similarity=0.273  Sum_probs=168.4

Q ss_pred             hHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcccccc---cccCCCchhHHHHHHH
Q psy5279         878 HVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYL---PIVIPTTHKDAYCVTS  954 (1310)
Q Consensus       878 ~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L---~~~i~~~~~~~~i~~Q  954 (1310)
                      .++.|.-|.+.-  .+||+--..-.++-.+-..+.|++|++|+             +..+.   +.....+..+++++..
T Consensus       123 Ra~tE~eIL~~l--DHPFlPTLYa~fet~~~~cl~meyCpGGd-------------L~~LrqkQp~~~fse~~aRFYaAE  187 (459)
T KOG0610|consen  123 RAQTEREILSLL--DHPFLPTLYASFETDKYSCLVMEYCPGGD-------------LHSLRQKQPGKRFSESAARFYAAE  187 (459)
T ss_pred             HHHHHHHHHHhc--CCCccchhhheeeccceeEEEEecCCCcc-------------HHHHHhhCCCCccchhhHHHHHHH
Confidence            344555555543  36777666555554444445566655554             33333   2334567789999999


Q ss_pred             HHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhH
Q psy5279         955 VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWS 1034 (1310)
Q Consensus       955 Il~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWS 1034 (1310)
                      |+.||+|||-.|||+||||||||||..  +++|-|+||-++.......+....        .+|+.-..   .+++    
T Consensus       188 vl~ALEYLHmlGivYRDLKPENILvre--dGHIMLsDFDLS~~~~~~Pt~~~s--------~~~~~~~~---~~~~----  250 (459)
T KOG0610|consen  188 VLLALEYLHMLGIVYRDLKPENILVRE--DGHIMLSDFDLSLRCPVSPTLVKS--------SSPRSSGS---QPSC----  250 (459)
T ss_pred             HHHHHHHHHhhceeeccCCcceeEEec--CCcEEeeeccccccCCCCCeeecc--------CCCCCCCC---Cccc----
Confidence            999999999999999999999999975  678999999988643111110000        01110000   0000    


Q ss_pred             HHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCccccccccccc
Q psy5279        1035 AGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRET 1114 (1310)
Q Consensus      1035 LGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~ 1114 (1310)
                         +.    ..-..|...                                 ++.....+..      +..-....+..  
T Consensus       251 ---~~----~~~s~f~~r---------------------------------~~~~~~~~~k------~~~~~~~~~p~--  282 (459)
T KOG0610|consen  251 ---RS----RQPSCFSPR---------------------------------CLSSSKKRKK------KDESASRSLPE--  282 (459)
T ss_pred             ---cc----ccccccccc---------------------------------hhcccccccc------ccccccccchh--
Confidence               00    000001000                                 0000000000      00000000000  


Q ss_pred             ccccccccccccCCcccCCCcccccc-cccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhccccccc
Q psy5279        1115 NYTFRLSAKNVIGWSEKGIPSALFKT-KEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1193 (1310)
Q Consensus      1115 ~~~~rlsa~~~i~~s~~~ips~lf~~-~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~ 1193 (1310)
                                .+.-+...--.++..+ ..-||||+.+++++.+||||++||++||||.|..||.|.+..+|+.||.....
T Consensus       283 ----------~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l  352 (459)
T KOG0610|consen  283 ----------LVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPL  352 (459)
T ss_pred             ----------hhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCC
Confidence                      0000000000111222 34799999999999999999999999999999999999999999999999999


Q ss_pred             ccccchhccCHHHHHHHHHhhhcCCCCCCC----HHHhhcCCccCC
Q psy5279        1194 RFEYLFKELTQEATRFLMLIFKRAPGKRPT----VEECHENRWLVP 1235 (1310)
Q Consensus      1194 ~f~~~~~~iS~eAkdfI~~lL~~dP~kRpT----a~e~L~HpWl~~ 1235 (1310)
                      .||... .+|.+|||||++||++||++|+.    |+|+.+||||..
T Consensus       353 ~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~g  397 (459)
T KOG0610|consen  353 KFPEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEG  397 (459)
T ss_pred             cCCCCC-cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccC
Confidence            998644 89999999999999999999998    999999999943

>KOG0690|consensus

Probab=99.96  E-value=4.4e-30  Score=283.63  Aligned_cols=243  Identities=25%  Similarity=0.362  Sum_probs=190.6

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHH---HHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~---~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      -.+.|+.+++||+|.||+|-+|+.+.||+.||||++++.-.-.++.   ...|-.+|+..+||.+..|...|++.+.+++
T Consensus       166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF  245 (516)
T KOG0690|consen  166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF  245 (516)
T ss_pred             ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence            3477899999999999999999999999999999997653333332   4568899999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~  336 (1310)
                      ||||+.||+|+.++.+...|+|..+++|-.+|..||.|||+++||.||||.+|+|++.+|  +|||+||||.|.-.. ..
T Consensus       246 VMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDG--HIKitDFGLCKE~I~~g~  323 (516)
T KOG0690|consen  246 VMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDG--HIKITDFGLCKEEIKYGD  323 (516)
T ss_pred             EEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCC--ceEeeecccchhcccccc
Confidence            999999999999999988899999999999999999999999999999999999999877  999999999996443 44


Q ss_pred             CCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCC
Q psy5279         337 KLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPG  416 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~  416 (1310)
                      .++++||||+|++     |+++       +          .+.|..+.||||.             .+.....+++--|+
T Consensus       324 t~kTFCGTPEYLA-----PEVl-------e----------DnDYgraVDWWG~-------------GVVMYEMmCGRLPF  368 (516)
T KOG0690|consen  324 TTKTFCGTPEYLA-----PEVL-------E----------DNDYGRAVDWWGV-------------GVVMYEMMCGRLPF  368 (516)
T ss_pred             eeccccCChhhcC-----chhh-------c----------cccccceeehhhh-------------hHHHHHHHhccCcc
Confidence            6789999999986     4443       1          1347888999888             34445555555566


Q ss_pred             CCCCCCCCCcceecccccccccccccccCCCCCCCcccc-cCCCCCCCCc
Q psy5279         417 TQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWE-DNVPNRGPGG  465 (1310)
Q Consensus       417 ~~~tp~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~~~-d~v~e~~~~~  465 (1310)
                      .+...+...+-| +-.+.|    ++-.+...++.+...+ ..+|..+-||
T Consensus       369 yn~dh~kLFeLI-l~ed~k----FPr~ls~eAktLLsGLL~kdP~kRLGg  413 (516)
T KOG0690|consen  369 YNKDHEKLFELI-LMEDLK----FPRTLSPEAKTLLSGLLKKDPKKRLGG  413 (516)
T ss_pred             cccchhHHHHHH-Hhhhcc----CCccCCHHHHHHHHHHhhcChHhhcCC
Confidence            666655444443 333334    4444555555554444 4455554444

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.96  E-value=2.5e-28  Score=283.15  Aligned_cols=147  Identities=27%  Similarity=0.427  Sum_probs=134.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .|++.+.||+|+||+||+|.++.+++.||+|++.+..   ......+.+|+.+|+.++|||||+++++|.+.+.+|+|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            5889999999999999999999999999999997542   2234567899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ||+||+|.+.+.+...+++..++.++.||+.||+|||++||+||||||+|||++.++  ++||+|||+++..
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~--~~kL~DFGl~~~~  151 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDG--HIKLTDFGLCTGF  151 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCC--CEEEeeCcCCccc
Confidence            999999999998877899999999999999999999999999999999999998655  8999999998643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.96  E-value=3e-29  Score=302.46  Aligned_cols=104  Identities=27%  Similarity=0.424  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccC-CcccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL-GTLIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~-g~~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      +..++.|++.||+|||++||+||||||+|||++.  +..+||+|||+++..... .........||+.|+|||++.+..+
T Consensus       145 ~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~--~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~  222 (496)
T PTZ00283        145 AGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS--NGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPY  222 (496)
T ss_pred             HHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeC--CCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCC
Confidence            4556789999999999999999999999999986  457999999998765321 1111223457899999999999999


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +.++|||||||++|+|++|..||.+.+
T Consensus       223 s~k~DVwSlGvilyeLltG~~Pf~~~~  249 (496)
T PTZ00283        223 SKKADMFSLGVLLYELLTLKRPFDGEN  249 (496)
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            999999999999999999999997654

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=4.7e-29  Score=277.83  Aligned_cols=164  Identities=24%  Similarity=0.383  Sum_probs=143.3

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|++.+.||+|+||.||+|.++.+|+.||+|++....   ......+.+|+.+|+.++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            46899999999999999999999999999999996532   123456789999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN  339 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~  339 (1310)
                      ||++||+|.+.+...+.+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++.....  ..
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~--~~kl~Dfg~~~~~~~~--~~  156 (291)
T cd05612          81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG--HIKLTDFGFAKKLRDR--TW  156 (291)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEEecCcchhccCC--cc
Confidence            9999999999998878899999999999999999999999999999999999998655  7999999999876432  22


Q ss_pred             CcccchHHHhh
Q psy5279         340 PLEYDVRYVRQ  350 (1310)
Q Consensus       340 ~~~~t~~yv~~  350 (1310)
                      ..++|+.|+++
T Consensus       157 ~~~gt~~y~aP  167 (291)
T cd05612         157 TLCGTPEYLAP  167 (291)
T ss_pred             cccCChhhcCH
Confidence            34566666543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0586|consensus

Probab=99.96  E-value=1e-29  Score=300.47  Aligned_cols=154  Identities=24%  Similarity=0.467  Sum_probs=130.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      +.++.|+++|++|||+++|||||||.+||||+.  +..+||+|||++..+.......+  .+|+|.|.|||++.+..|  
T Consensus       158 r~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~--~mnikIaDfgfS~~~~~~~~lqt--~cgsppyAaPEl~~g~~y--  231 (596)
T KOG0586|consen  158 RAKFRQIVSAVEYCHSKNIVHRDLKAENILLDE--NMNIKIADFGFSTFFDYGLMLQT--FCGSPPYAAPELFNGKKY--  231 (596)
T ss_pred             hhhhHHHHHHHHHHhhcceeccccchhhccccc--ccceeeeccccceeecccccccc--cCCCCCccChHhhcCccc--
Confidence            445779999999999999999999999999985  45699999999987764444333  456688998888655422  


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCccccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVK 1108 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~ 1108 (1310)
                                                                                                      
T Consensus       232 --------------------------------------------------------------------------------  231 (596)
T KOG0586|consen  232 --------------------------------------------------------------------------------  231 (596)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcc
Q psy5279        1109 DLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1188 (1310)
Q Consensus      1109 ~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I 1188 (1310)
                                                                  .++++|+||+||++|.|++|..||.|.+..+....+
T Consensus       232 --------------------------------------------~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rv  267 (596)
T KOG0586|consen  232 --------------------------------------------DGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRV  267 (596)
T ss_pred             --------------------------------------------CCcceehhhhhhhheeeeecccccCCcccccccchh
Confidence                                                        245688999999999999999999999988888889


Q ss_pred             cccccccccchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCC
Q psy5279        1189 NFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235 (1310)
Q Consensus      1189 ~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~ 1235 (1310)
                      ..+++..|.   .||.+++++|+++|.++|++|+|++|+++|.|+..
T Consensus       268 l~gk~rIp~---~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~  311 (596)
T KOG0586|consen  268 LRGKYRIPF---YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND  311 (596)
T ss_pred             eeeeecccc---eeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence            999998873   69999999999999999999999999999999843

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.6e-29  Score=272.33  Aligned_cols=92  Identities=29%  Similarity=0.444  Sum_probs=77.5

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhh-chhhHHHHHHhcCCCC--ccc
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSL-RHERIASLLEAYKPST--TAS  669 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~  669 (1310)
                      .+++.|+++..|.+|.||.|.+|..+. ++..++.|.+........++..|++.++++ .|++|..+++.+....  .-.
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKK-TGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECC-CCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            578999999999999999999887654 678999999999888888899999999999 6999999999876543  334


Q ss_pred             chhhHHHHhhcCchhh
Q psy5279         670 NIAVLVMEKLQGADVL  685 (1310)
Q Consensus       670 ~~~~~~~~~~~~~~~~  685 (1310)
                      ....+|||++.|..+.
T Consensus        82 ~~~~lv~e~~~~~~L~   97 (275)
T cd06608          82 DQLWLVMELCGGGSVT   97 (275)
T ss_pred             eEEEEEEEcCCCCcHH
Confidence            5677999999886543

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.96  E-value=1.5e-29  Score=293.41  Aligned_cols=157  Identities=24%  Similarity=0.403  Sum_probs=125.4

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC----
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP---- 1025 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~---- 1025 (1310)
                      .++.||+.||+|||++||+||||||+|||++.  ++.+||+|||++......+........||+.|||||++.+..    
T Consensus       146 ~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~--~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~  223 (371)
T cd05622         146 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK--SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY  223 (371)
T ss_pred             HHHHHHHHHHHHHHHCCEEeCCCCHHHEEECC--CCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCcc
Confidence            45679999999999999999999999999975  567999999999766433332223445789999999997643    


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccc--cccccchhccHHHHHHHHHhccCCcc---hhcHHhhh
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY--RFEYLFKELTQEATRFLMLIFKHEVD---WITLANNI 1100 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~--~f~~~~~~lS~eakdLL~~il~~~~~---rit~~e~L 1100 (1310)
                      ++.++|||||||++|+|++|.+||.+.+.......+.....  .++. ...++.+++++|..|+.+++.   |.++.+++
T Consensus       224 ~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~  302 (371)
T cd05622         224 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD-DNDISKEAKNLICAFLTDREVRLGRNGVEEIK  302 (371)
T ss_pred             CCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCC-cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHh
Confidence            77899999999999999999999999888777777654332  2332 246899999999999975544   67899999


Q ss_pred             CCCcccccc
Q psy5279        1101 DHEFWHVKD 1109 (1310)
Q Consensus      1101 ~H~f~~~~~ 1109 (1310)
                      .|+|+....
T Consensus       303 ~h~~~~~~~  311 (371)
T cd05622         303 RHLFFKNDQ  311 (371)
T ss_pred             cCcccCCCC
Confidence            999886533

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=2.4e-29  Score=289.60  Aligned_cols=97  Identities=29%  Similarity=0.428  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++|||||||||+|||++.  ...+||+|||+++......  ......|++.|+|||++.+..++.
T Consensus       160 ~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--~~~~kl~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~  235 (357)
T PHA03209        160 LIIEKQILEGLRYLHAQRIIHRDVKTENIFIND--VDQVCIGDLGAAQFPVVAP--AFLGLAGTVETNAPEVLARDKYNS  235 (357)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEecCccccccccCc--ccccccccccccCCeecCCCCCCc
Confidence            345679999999999999999999999999975  4569999999986432211  112235779999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPF 1049 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF 1049 (1310)
                      ++|||||||++|+|+++..|+
T Consensus       236 ~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        236 KADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             hhhHHHHHHHHHHHHHcCCcc
Confidence            999999999999999855444

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.96  E-value=1.6e-29  Score=285.39  Aligned_cols=102  Identities=27%  Similarity=0.486  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++...... .......|++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~  175 (321)
T cd05603          99 RFYAAEVASAIGYLHSLNIIYRDLKPENILLDS--QGHVVLTDFGLCKEGVEPE-ETTSTFCGTPEYLAPEVLRKEPYDR  175 (321)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEccCCCCccCCCCC-CccccccCCcccCCHHHhcCCCCCC
Confidence            345679999999999999999999999999976  4579999999986432111 1122345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|||||||++|+|++|..||.+.+
T Consensus       176 ~~DiwslG~il~el~~g~~pf~~~~  200 (321)
T cd05603         176 TVDWWCLGAVLYEMLYGLPPFYSRD  200 (321)
T ss_pred             cCcccccchhhhhhhcCCCCCCCCC
Confidence            9999999999999999999997654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=3.1e-29  Score=302.53  Aligned_cols=100  Identities=22%  Similarity=0.280  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++|||||||||+|||++.  ++.+||+|||+++.+............|++.|+|||++.+..|+.
T Consensus       270 ~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~--~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  347 (501)
T PHA03210        270 RAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNC--DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCE  347 (501)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCc
Confidence            346789999999999999999999999999975  457999999999766433222222345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      ++|||||||++|+|++|..|+.
T Consensus       348 ~~DiwSlGvil~ell~~~~~p~  369 (501)
T PHA03210        348 ITDIWSCGLILLDMLSHDFCPI  369 (501)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCc
Confidence            9999999999999999876543

>KOG0663|consensus

Probab=99.96  E-value=3e-29  Score=279.07  Aligned_cols=183  Identities=21%  Similarity=0.288  Sum_probs=134.1

Q ss_pred             cccccchhhhhhhcc-cCCCchhhHhHHHHHhhhcCCC-CCceeecceeeeeeeCCEEEEEEeccCCCc----ceeeecc
Q psy5279         856 YGAADTYTLRRLRHE-IGTRPEAHVEADALIESRRDGH-APFFREKPITIPVVIGDKLEMKCLAVGEPK----PVIQWFK  929 (1310)
Q Consensus       856 ~~~~~~~~~~~l~~e-~~~~~~~~~~a~~~ie~~~~~~-~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~----~vi~~f~  929 (1310)
                      .+-.+++|+|++|=+ .+                 ++. +.-+||+.+...+.|.+++..+-+-+|...    .||++.+
T Consensus        98 k~t~eIVALKr~kmekek-----------------~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E  160 (419)
T KOG0663|consen   98 KKTDEIVALKRLKMEKEK-----------------EGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVE  160 (419)
T ss_pred             CCcceeEEeeeccccccc-----------------CCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHH
Confidence            345678999999832 11                 111 244677777777778888877776666543    3444433


Q ss_pred             cCCccccccccc--CCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccccc
Q psy5279         930 LGTSTLCYLPIV--IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP 1007 (1310)
Q Consensus       930 ~g~~l~~~L~~~--i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~ 1007 (1310)
                        .++..+|...  -..+..+..++.|++.||+|||.+.|+||||||+|+|+..  .+.+||+|||+|+.++..-...++
T Consensus       161 --hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~--~G~lKiaDFGLAR~ygsp~k~~T~  236 (419)
T KOG0663|consen  161 --HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSH--KGILKIADFGLAREYGSPLKPYTP  236 (419)
T ss_pred             --hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeecc--CCcEEecccchhhhhcCCcccCcc
Confidence              3334444322  1245567888999999999999999999999999999985  567999999999877543322222


Q ss_pred             CCCCCCcccccccccCC-CCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhh
Q psy5279        1008 INTPNPEFAAPEVLAEE-PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060 (1310)
Q Consensus      1008 ~~tGtp~Y~APEvl~~~-~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~ 1060 (1310)
                      . .-|.+|+|||.+.+. .|+.++|+||+|||+.|||++.+-|.|.++.+....
T Consensus       237 l-VVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~  289 (419)
T KOG0663|consen  237 L-VVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDK  289 (419)
T ss_pred             e-EEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHH
Confidence            2 336899999999987 589999999999999999999999999987655443

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.96  E-value=2.8e-29  Score=280.74  Aligned_cols=107  Identities=23%  Similarity=0.345  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++|++||||||+||+++.  ...+||+|||++.......... ....+++.|+|||++.+ ..++
T Consensus       111 ~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~kL~dfg~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~  187 (309)
T cd07845         111 KCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTD--KGCLKIADFGLARTYGLPAKPM-TPKVVTLWYRAPELLLGCTTYT  187 (309)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEECccceeeecCCccCCC-CcccccccccChhhhcCCCCcC
Confidence            345779999999999999999999999999975  4579999999987654322111 11234678999999876 4578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      .++|+|||||++|+|++|.+||.+.+..+..
T Consensus       188 ~~~DvwslG~il~el~~g~~~f~~~~~~~~~  218 (309)
T cd07845         188 TAIDMWAVGCILAELLAHKPLLPGKSEIEQL  218 (309)
T ss_pred             chHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            9999999999999999999999887655443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.95  E-value=3.8e-28  Score=280.30  Aligned_cols=147  Identities=24%  Similarity=0.419  Sum_probs=134.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ..|++.+.||+|+||.||+|.++.+|+.||+|++.+..   ......+.+|+.+|+.++||||+++++.|.+++.+||||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            36899999999999999999999999999999986432   123455789999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                      |||+||+|.+.+.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~--~ikL~DFG~a~~  150 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLTDFGLCTG  150 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCC--CEEEEeCCCCcc
Confidence            9999999999998888899999999999999999999999999999999999998655  799999999853

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.95  E-value=8.8e-29  Score=280.26  Aligned_cols=160  Identities=26%  Similarity=0.432  Sum_probs=138.2

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGG  265 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GG  265 (1310)
                      +.||+|+||.||+|.++.+|+.||+|++.+..   ......+.+|+.+|+.++||||++++++|...+.+||||||++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999999999999999997532   122345678999999999999999999999999999999999999


Q ss_pred             chHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCCCCcccc
Q psy5279         266 ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKLNPLEYD  344 (1310)
Q Consensus       266 eL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l~~~~~t  344 (1310)
                      +|...+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+..... ......+||
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~--~~kl~DfG~a~~~~~~~~~~~~~~gt  158 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGT  158 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEeeCCCCcccccCCCcccceecC
Confidence            9999998878899999999999999999999999999999999999998655  7999999999864322 233445677


Q ss_pred             hHHHhh
Q psy5279         345 VRYVRQ  350 (1310)
Q Consensus       345 ~~yv~~  350 (1310)
                      +.|+++
T Consensus       159 ~~y~aP  164 (323)
T cd05571         159 PEYLAP  164 (323)
T ss_pred             ccccCh
Confidence            766654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.95  E-value=8.9e-29  Score=272.58  Aligned_cols=88  Identities=19%  Similarity=0.282  Sum_probs=73.3

Q ss_pred             CcchhhhhhccccchhhhHHHHhhccccceeeeecccCcc--hhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchhh
Q psy5279         596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD--TLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAV  673 (1310)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  673 (1310)
                      +.|++++.|..|.||+|.+|..+. ++..+|.|.+....+  ...++..|.+.|+.++|++|..+++.+...    +...
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~   75 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRP-TGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIE----GAVY   75 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcC-CCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC----CeEE
Confidence            469999999999999999886654 789999998876433  345677899999999999999999988765    6678


Q ss_pred             HHHHhhcCchhhhhh
Q psy5279         674 LVMEKLQGADVLSYL  688 (1310)
Q Consensus       674 ~~~~~~~~~~~~~~~  688 (1310)
                      +|||+|.|..+.+++
T Consensus        76 lv~e~~~~~~l~~~~   90 (286)
T cd06622          76 MCMEYMDAGSLDKLY   90 (286)
T ss_pred             EEEeecCCCCHHHHH
Confidence            899999998776554

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0578|consensus

Probab=99.95  E-value=4.8e-29  Score=292.78  Aligned_cols=226  Identities=28%  Similarity=0.415  Sum_probs=188.4

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ......|....+||+|+-|.||.|....+++.||||.+..+....++.+.+|+.+|+.++|+|||.+++.|.-.+.++.|
T Consensus       269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV  348 (550)
T KOG0578|consen  269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV  348 (550)
T ss_pred             CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence            35567899999999999999999999999999999999988777788899999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-C
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-K  337 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~  337 (1310)
                      ||||+||+|.+.+.. ..++|.+++.+++++|.||+|||.+||+|||||.+|||+..++  .|||+|||++..+.... .
T Consensus       349 MEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g--~vKltDFGFcaqi~~~~~K  425 (550)
T KOG0578|consen  349 MEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDG--SVKLTDFGFCAQISEEQSK  425 (550)
T ss_pred             EeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCC--cEEEeeeeeeeccccccCc
Confidence            999999998887754 4699999999999999999999999999999999999998776  69999999999887655 6


Q ss_pred             CCCcccchHHHhhh--cCCCc------cccC-------CCCCCCCCCCcchhhhhhh-----------------cccchh
Q psy5279         338 LNPLEYDVRYVRQA--LRHPW------LNFA-------DRKPTEDTPKLNTDALRNY-----------------YNLYKD  385 (1310)
Q Consensus       338 l~~~~~t~~yv~~~--~r~P~------l~~~-------~~~~~~~~p~~~~~~~~~~-----------------~~~~~D  385 (1310)
                      -.+++|||.|+++.  -|.++      +.+|       +.+|    |+++...++.+                 ...++|
T Consensus       426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEP----PYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kd  501 (550)
T KOG0578|consen  426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEP----PYLNENPLRALYLIATNGTPKLKNPEKLSPELKD  501 (550)
T ss_pred             cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCC----CccCCChHHHHHHHhhcCCCCcCCccccCHHHHH
Confidence            67889998777642  11111      1111       1111    33333333322                 344589


Q ss_pred             hchhhhhhhcccCCCCCCccCCCcce
Q psy5279         386 WYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       386 ~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      |...++.-+..+|.++.+.|.||++.
T Consensus       502 FL~~cL~~dv~~RasA~eLL~HpFl~  527 (550)
T KOG0578|consen  502 FLDRCLVVDVEQRASAKELLEHPFLK  527 (550)
T ss_pred             HHHHHhhcchhcCCCHHHHhcChhhh
Confidence            99999999999999999999999973

>KOG0591|consensus

Probab=99.95  E-value=8.7e-31  Score=285.99  Aligned_cols=167  Identities=24%  Similarity=0.353  Sum_probs=143.2

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC--CcchHHHHHHHHHHHHhcCCCCcceEEE-EEEeCCe-EE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKSLFKNELDIMNQLCHRNLVRLHD-SYETKDS-FT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~--~~~~~~~~~rEI~IL~~L~HPNIVkL~d-~f~~~~~-ly  256 (1310)
                      -...|++.++||+|+||.||++.+..+|..+|.|.|.-.  ..+.++.+..||.+|++|+|||||++++ .|..++. ++
T Consensus        17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln   96 (375)
T KOG0591|consen   17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN   96 (375)
T ss_pred             cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence            346699999999999999999999999999999988632  2345667889999999999999999987 5655555 99


Q ss_pred             EEEecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhh--CC--eeecCCCCCCEEeecCCCCeEEEEeecc
Q psy5279         257 IISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHR--LS--IAHLGLTPGDLLVAHPGGRHLLLTDFGL  328 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs--~g--IVHRDLKPeNILL~~~~~~~VKLsDFGL  328 (1310)
                      ||||||.+|+|...+..    +..++|..+..|+.|+|.||..||+  .+  |+||||||.||+|+.+|  .|||+||||
T Consensus        97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~g--vvKLGDfGL  174 (375)
T KOG0591|consen   97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANG--VVKLGDFGL  174 (375)
T ss_pred             HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCC--ceeeccchh
Confidence            99999999999888752    3459999999999999999999999  55  99999999999998766  899999999


Q ss_pred             ceeecCC-CCCCCcccchHHHh
Q psy5279         329 SRRITSF-GKLNPLEYDVRYVR  349 (1310)
Q Consensus       329 Ar~i~~~-~~l~~~~~t~~yv~  349 (1310)
                      +|.+.+. ....+++|||-|+.
T Consensus       175 ~r~l~s~~tfA~S~VGTPyYMS  196 (375)
T KOG0591|consen  175 GRFLSSKTTFAHSLVGTPYYMS  196 (375)
T ss_pred             HhHhcchhHHHHhhcCCCcccC
Confidence            9988654 34567888888874

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.95  E-value=6e-29  Score=284.61  Aligned_cols=104  Identities=24%  Similarity=0.436  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||+|||++||+||||||+|||++.  ++.+||+|||++........  .....+++.|+|||.+.+..++.
T Consensus       121 ~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~  196 (353)
T cd07850         121 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKE  196 (353)
T ss_pred             HHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC--CCCEEEccCccceeCCCCCC--CCCCcccccccCHHHHhCCCCCC
Confidence            345679999999999999999999999999986  45699999999976543221  12234678999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++|||||||++|+|++|..||.+.+...
T Consensus       197 ~~DvwslG~~l~~l~~g~~pf~~~~~~~  224 (353)
T cd07850         197 NVDIWSVGCIMGEMIRGTVLFPGTDHID  224 (353)
T ss_pred             chhhHhHHHHHHHHHHCCCCCCCCCHHH
Confidence            9999999999999999999998776543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.95  E-value=4.2e-29  Score=283.24  Aligned_cols=153  Identities=24%  Similarity=0.432  Sum_probs=124.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++....... ......|++.|+|||++.+..++.
T Consensus        98 ~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  174 (323)
T cd05595          98 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK--DGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGR  174 (323)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcC--CCCEEecccHHhccccCCCC-ccccccCCcCcCCcccccCCCCCc
Confidence            445679999999999999999999999999975  45699999998864322111 112345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCC-cchh-----cHHhhhCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHE-VDWI-----TLANNIDH 1102 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~-~~ri-----t~~e~L~H 1102 (1310)
                      ++|+|||||++|+|++|..||.+.+..+....+......++   ..++++++++|.+|+..+ .+|+     ++.+++.|
T Consensus       175 ~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         175 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             hhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence            99999999999999999999998887777766665555544   467899999999999754 5566     89999999


Q ss_pred             Ccccc
Q psy5279        1103 EFWHV 1107 (1310)
Q Consensus      1103 ~f~~~ 1107 (1310)
                      +|+..
T Consensus       252 ~~~~~  256 (323)
T cd05595         252 RFFLS  256 (323)
T ss_pred             CCcCC
Confidence            98864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.95  E-value=1e-29  Score=273.74  Aligned_cols=101  Identities=33%  Similarity=0.627  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc-CCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA-EEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~-~~~ys 1027 (1310)
                      ..++.||++||.+||++||+||||||+|||++.  ++.++|+|||.+...... ........+++.|+|||++. +..++
T Consensus       101 ~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~--~~~~~l~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~  177 (260)
T PF00069_consen  101 LKIAYQILEALAYLHSKGIVHRDIKPENILLDE--NGEVKLIDFGSSVKLSEN-NENFNPFVGTPEYMAPEVLQQGKKYT  177 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEESSBSGGGEEEST--TSEEEESSGTTTEESTST-TSEBSSSSSSGGGSCHHHHTTTSSBS
T ss_pred             ccccccccccccccccccccccccccccccccc--cccccccccccccccccc-cccccccccccccccccccccccccc
Confidence            445679999999999999999999999999984  567999999998754211 12233445678999999998 77889


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|+||||+++|+|++|..||...
T Consensus       178 ~~~Di~slG~il~~l~~~~~p~~~~  202 (260)
T PF00069_consen  178 RKSDIWSLGIILYELLTGKLPFEES  202 (260)
T ss_dssp             THHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred             ccccccccccccccccccccccccc
Confidence            9999999999999999999999865

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.95  E-value=9.9e-29  Score=286.06  Aligned_cols=147  Identities=27%  Similarity=0.428  Sum_probs=134.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .|++.+.||+|+||.||+|.++.+++.||+|++.+...   .....+.+|+.+|++++|||||+++++|.+++.+|||||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            58899999999999999999999999999999975321   234467889999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ||+||+|.+.+.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+..
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g--~~kL~DFGla~~~  151 (382)
T cd05625          82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG--HIKLTDFGLCTGF  151 (382)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--CEEEeECCCCccc
Confidence            999999999998877899999999999999999999999999999999999998655  8999999998643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.95  E-value=6.4e-28  Score=269.50  Aligned_cols=149  Identities=30%  Similarity=0.483  Sum_probs=131.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .+.|++.+.||+|+||.||+|.++.+|+.||||++..... .....+.+|+.+|+.++||||+++++++.+++.+|+|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            4789999999999999999999999999999999875432 223456789999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         261 LAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       261 y~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |+. ++|.+.+... +.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+...
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~  154 (303)
T cd07869          84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG--ELKLADFGLARAKS  154 (303)
T ss_pred             CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEECCCCcceecc
Confidence            996 5676666543 5689999999999999999999999999999999999998655  79999999998653

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0198|consensus

Probab=99.95  E-value=4.7e-29  Score=283.56  Aligned_cols=152  Identities=22%  Similarity=0.343  Sum_probs=111.7

Q ss_pred             ecceeeeeeeCCEEEEEEe-ccCC--CcceeeecccCCcccccccccC--CCchhHHHHHHHHHHHHHHHHHCCceeccc
Q psy5279         898 EKPITIPVVIGDKLEMKCL-AVGE--PKPVIQWFKLGTSTLCYLPIVI--PTTHKDAYCVTSVLDGLQYLHWRGLCHLNI  972 (1310)
Q Consensus       898 E~~~~~~l~~g~~l~~~~l-~~G~--p~~vi~~f~~g~~l~~~L~~~i--~~~~~~~~i~~QIl~AL~yLHs~gIVHRDL  972 (1310)
                      |..+...+.|.++|.+... ...+  ...++..|..++++..++...-  ..+..++.+.+||++||.|||++|||||||
T Consensus        64 Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~Di  143 (313)
T KOG0198|consen   64 EIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDI  143 (313)
T ss_pred             HHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCc
Confidence            3333444445566655553 2222  3556777778888888776542  355567888999999999999999999999


Q ss_pred             CCCcEEEeecCCCcEEEEeeccceeeccCC--cccccCCCCCCcccccccccCCC-CCCccchhHHHHHHHHHhcCCCCC
Q psy5279         973 EPDNVVMASVRSVQVKLIDLGCTQRVTKLG--TLIHPINTPNPEFAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPF 1049 (1310)
Q Consensus       973 KPeNILl~~~~~~~VKL~DFGlAk~~~~~g--~~~~~~~tGtp~Y~APEvl~~~~-ys~ksDIWSLGViLyeLLtG~~PF 1049 (1310)
                      ||+|||++.. ++.+||+|||+++......  ........|||.|||||++..+. .+.++|||||||++.||++|.+||
T Consensus       144 K~~NiLl~~~-~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW  222 (313)
T KOG0198|consen  144 KPANILLDPS-NGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPW  222 (313)
T ss_pred             ccceEEEeCC-CCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcc
Confidence            9999999862 3569999999988665311  11223356889999999999632 234899999999999999999998


Q ss_pred             C
Q psy5279        1050 R 1050 (1310)
Q Consensus      1050 ~ 1050 (1310)
                      .
T Consensus       223 ~  223 (313)
T KOG0198|consen  223 S  223 (313)
T ss_pred             h
Confidence            5

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=5.4e-28  Score=277.17  Aligned_cols=149  Identities=26%  Similarity=0.477  Sum_probs=136.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|++.+.||+|+||+||+|.+..+|+.||||++....   ......+.+|+.+|+.++||||++++++|.+++.+||||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            46899999999999999999999999999999997532   223445778999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |||+||+|.+.+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++.+.
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~~~~~~  152 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKG--HIKLSDFGLCTGLK  152 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEeecccceecc
Confidence            9999999999998878899999999999999999999999999999999999998655  79999999998754

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0659|consensus

Probab=99.95  E-value=1.8e-28  Score=266.86  Aligned_cols=108  Identities=23%  Similarity=0.354  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      ...++.|++.||+|||++.|+||||||.|+|+++  ++.+||+|||+|+.........+. ..-|..|+|||.+.|. .|
T Consensus       103 iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~--~g~lKiADFGLAr~f~~p~~~~~~-~V~TRWYRAPELLfGsr~Y  179 (318)
T KOG0659|consen  103 IKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISS--DGQLKIADFGLARFFGSPNRIQTH-QVVTRWYRAPELLFGSRQY  179 (318)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhcccCCccceEEcC--CCcEEeecccchhccCCCCccccc-ceeeeeccChHHhccchhc
Confidence            3456779999999999999999999999999986  567999999999877543332221 1346899999999876 58


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      +..+|+||.|||+.||+-|.+-|.|+++-+..
T Consensus       180 g~~VDmWavGCI~AELllr~P~fpG~sDidQL  211 (318)
T KOG0659|consen  180 GTGVDMWAVGCIFAELLLRVPFFPGDSDIDQL  211 (318)
T ss_pred             CCcchhhhHHHHHHHHHccCCCCCCCchHHHH
Confidence            99999999999999999999999998875543

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.95  E-value=2.8e-29  Score=312.64  Aligned_cols=95  Identities=23%  Similarity=0.365  Sum_probs=85.4

Q ss_pred             cccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccccchhccCHHHHHHHHHhhhcCCCC
Q psy5279        1141 KEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGK 1220 (1310)
Q Consensus      1141 ~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~k 1220 (1310)
                      .+.|||++...+|+.++||||+||++|+||+|.+||.+.+..+.+..+....+.++.....++.++++||.+||..||.+
T Consensus       545 ~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~  624 (669)
T cd05610         545 DYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTK  624 (669)
T ss_pred             cccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhH
Confidence            35799999999999999999999999999999999999999888888877766665444578999999999999999999


Q ss_pred             CCCHHHhhcCCccCC
Q psy5279        1221 RPTVEECHENRWLVP 1235 (1310)
Q Consensus      1221 RpTa~e~L~HpWl~~ 1235 (1310)
                      |||+.|+|+||||..
T Consensus       625 R~ta~e~l~h~~~~~  639 (669)
T cd05610         625 RAGLKELKQHPLFHG  639 (669)
T ss_pred             CcCHHHHHhCHhhcC
Confidence            999999999999854

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0612|consensus

Probab=99.95  E-value=4.1e-29  Score=307.96  Aligned_cols=186  Identities=24%  Similarity=0.376  Sum_probs=158.4

Q ss_pred             CcceeeecccCCcccccccccC-CCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeec
Q psy5279         921 PKPVIQWFKLGTSTLCYLPIVI-PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT  999 (1310)
Q Consensus       921 p~~vi~~f~~g~~l~~~L~~~i-~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~  999 (1310)
                      ...||+|+. ||++..+|.... ..+.-++||+..|+.||+-||+.|+|||||||+||||+.  .++|||+|||.+-.+.
T Consensus       150 LYlVMdY~p-GGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~--~GHikLADFGsClkm~  226 (1317)
T KOG0612|consen  150 LYLVMDYMP-GGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK--SGHIKLADFGSCLKMD  226 (1317)
T ss_pred             eEEEEeccc-CchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc--cCcEeeccchhHHhcC
Confidence            345666665 445555554332 344558889999999999999999999999999999986  6789999999988888


Q ss_pred             cCCcccccCCCCCCcccccccccC-----CCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccc--cccccccc
Q psy5279        1000 KLGTLIHPINTPNPEFAAPEVLAE-----EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFV--RYRFEYLF 1072 (1310)
Q Consensus      1000 ~~g~~~~~~~tGtp~Y~APEvl~~-----~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~--~~~f~~~~ 1072 (1310)
                      ..|+.......|||.|.+||++..     +.|+..|||||+||++||||.|..||+.++..+++.+|..-  .+.||...
T Consensus       227 ~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~  306 (1317)
T KOG0612|consen  227 ADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDET  306 (1317)
T ss_pred             CCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCccc
Confidence            889888888999999999999962     45889999999999999999999999999999999999776  56677333


Q ss_pred             hhccHHHHHHHHHhccCCcchhc---HHhhhCCCccccccc
Q psy5279        1073 KELTQEATRFLMLIFKHEVDWIT---LANNIDHEFWHVKDL 1110 (1310)
Q Consensus      1073 ~~lS~eakdLL~~il~~~~~rit---~~e~L~H~f~~~~~l 1110 (1310)
                       .+|.++++||..++.++..|..   +.++-.|+||...+.
T Consensus       307 -~VSeeakdLI~~ll~~~e~RLgrngiedik~HpFF~g~~W  346 (1317)
T KOG0612|consen  307 -DVSEEAKDLIEALLCDREVRLGRNGIEDIKNHPFFEGIDW  346 (1317)
T ss_pred             -ccCHHHHHHHHHHhcChhhhcccccHHHHHhCccccCCCh
Confidence             4999999999999999998888   999999999987765

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.95  E-value=1.4e-28  Score=279.32  Aligned_cols=106  Identities=22%  Similarity=0.408  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccc---ccCCCCCCcccccccccC-C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI---HPINTPNPEFAAPEVLAE-E 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~---~~~~tGtp~Y~APEvl~~-~ 1024 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++..........   .....+++.|+|||.+.+ .
T Consensus       110 ~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  187 (334)
T cd07855         110 RYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNE--DCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLP  187 (334)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCc
Confidence            344569999999999999999999999999985  5679999999987653322111   112346788999999866 4


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++.++|+|||||++|+|++|..||.+.+...
T Consensus       188 ~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~  219 (334)
T cd07855         188 EYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH  219 (334)
T ss_pred             ccccccchHHHHHHHHHHHcCCCccCCCChHH
Confidence            58899999999999999999999998765543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=6.6e-28  Score=273.60  Aligned_cols=163  Identities=25%  Similarity=0.382  Sum_probs=142.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|++.+.||+|+||.||+|.+..+|+.||+|++.+..   ......+.+|+.+|+.++||||+++++++...+.+||||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            36899999999999999999999999999999997542   123455788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN  339 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~  339 (1310)
                      ||++||+|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+....  ...
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kL~Dfg~a~~~~~--~~~  156 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG--HIKLTDFGLSKGIVT--YAN  156 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEEEeCcCCccccc--ccC
Confidence            9999999999998877899999999999999999999999999999999999998655  799999999987643  233


Q ss_pred             CcccchHHHh
Q psy5279         340 PLEYDVRYVR  349 (1310)
Q Consensus       340 ~~~~t~~yv~  349 (1310)
                      ..++|+.|++
T Consensus       157 ~~~gt~~y~a  166 (333)
T cd05600         157 SVVGSPDYMA  166 (333)
T ss_pred             CcccCccccC
Confidence            4455555544

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.95  E-value=8.3e-29  Score=269.97  Aligned_cols=97  Identities=21%  Similarity=0.349  Sum_probs=81.0

Q ss_pred             CCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhh-chhhHHHHHHhcCCCCc--c
Q psy5279         592 EPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSL-RHERIASLLEAYKPSTT--A  668 (1310)
Q Consensus       592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~  668 (1310)
                      ++|+..|.....|.+|.||.|.+|..+ +++..+|.|.+.+.......+.+|...|+.+ +|++|..+++.+.....  .
T Consensus         2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~-~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (272)
T cd06637           2 RDPAGIFELVELVGNGTYGQVYKGRHV-KTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM   80 (272)
T ss_pred             CChhhhhhHHHheeecCCeEEEEEEEc-CCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence            578899999999999999999988665 4788999999999988888899999999998 79999999988764322  1


Q ss_pred             cchhhHHHHhhcCchhhhhhh
Q psy5279         669 SNIAVLVMEKLQGADVLSYLS  689 (1310)
Q Consensus       669 ~~~~~~~~~~~~~~~~~~~~~  689 (1310)
                      .+...+|||++.|.++..++.
T Consensus        81 ~~~~~iv~e~~~~~~L~~~l~  101 (272)
T cd06637          81 DDQLWLVMEFCGAGSVTDLIK  101 (272)
T ss_pred             CcEEEEEEEcCCCCcHHHHHH
Confidence            245678999999988877654

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.95  E-value=7.3e-29  Score=277.15  Aligned_cols=106  Identities=22%  Similarity=0.320  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec--CCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV--RSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAE 1023 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~--~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~ 1023 (1310)
                      ...++.||+.||.|||++||+||||||+|||+...  ....+||+|||+++.......  .......+++.|+|||++.+
T Consensus       110 ~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07867         110 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             HHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcC
Confidence            34567899999999999999999999999999532  245799999999976532211  11122356789999999977


Q ss_pred             C-CCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1024 E-PIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1024 ~-~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      . .++.++|||||||++|+|++|.+||....
T Consensus       190 ~~~~~~~~DiwSlG~il~el~tg~~~f~~~~  220 (317)
T cd07867         190 ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  220 (317)
T ss_pred             CCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence            4 57899999999999999999999997654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.95  E-value=1.1e-28  Score=270.44  Aligned_cols=105  Identities=24%  Similarity=0.478  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys~ 1028 (1310)
                      .++.||+.||.|||++||+|+||||+||+++.  ...++|+|||++...............+++.|+|||.+.+. .++.
T Consensus       103 ~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  180 (286)
T cd07832         103 SYMRMLLKGVAYMHANGIMHRDLKPANLLISA--DGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDP  180 (286)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC--CCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCc
Confidence            34679999999999999999999999999986  45699999999876543322112233567899999998755 4688


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++||||+||++|+|++|.+||.+.+..+
T Consensus       181 ~~Di~slG~~l~~l~tg~~~~~~~~~~~  208 (286)
T cd07832         181 GVDLWAVGCIFAELLNGSPLFPGENDIE  208 (286)
T ss_pred             hhHHHHHHHHHHHHHcCCcCcCCCCHHH
Confidence            9999999999999999999998766543

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.95  E-value=6.9e-29  Score=281.93  Aligned_cols=100  Identities=28%  Similarity=0.482  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+. ......|++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  175 (327)
T cd05617          99 RFYAAEICIALNFLHERGIIYRDLKLDNVLLDA--DGHIKLTDYGMCKEGLGPGD-TTSTFCGTPNYIAPEILRGEEYGF  175 (327)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeC--CCCEEEeccccceeccCCCC-ceecccCCcccCCHHHHCCCCCCc
Confidence            345679999999999999999999999999986  45699999999875322111 112345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ++|||||||++|+|++|..||..
T Consensus       176 ~~DiwslGvil~ell~g~~pf~~  198 (327)
T cd05617         176 SVDWWALGVLMFEMMAGRSPFDI  198 (327)
T ss_pred             hheeehhHHHHHHHHhCCCCCCc
Confidence            99999999999999999999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.95  E-value=3.7e-28  Score=276.37  Aligned_cols=160  Identities=28%  Similarity=0.443  Sum_probs=137.9

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGG  265 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GG  265 (1310)
                      +.||+|+||.||+|.++.+|+.||+|++.+..   ......+.+|+.+|+.++||||+++++++...+.+|+||||++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999999999999999997532   223445778999999999999999999999999999999999999


Q ss_pred             chHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCcccc
Q psy5279         266 ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEYD  344 (1310)
Q Consensus       266 eL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~t  344 (1310)
                      +|...+.....+++.+++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++.... .......++|
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~--~~kL~DfG~~~~~~~~~~~~~~~~gt  158 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG--HIKITDFGLCKEGITDAATMKTFCGT  158 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCC--cEEEecCcCCccCCCcccccccccCC
Confidence            9999988777899999999999999999999999999999999999998655  799999999986432 2233445667


Q ss_pred             hHHHhh
Q psy5279         345 VRYVRQ  350 (1310)
Q Consensus       345 ~~yv~~  350 (1310)
                      +.|+++
T Consensus       159 ~~y~aP  164 (328)
T cd05593         159 PEYLAP  164 (328)
T ss_pred             cCccCh
Confidence            666554

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0582|consensus

Probab=99.95  E-value=9e-28  Score=275.14  Aligned_cols=230  Identities=21%  Similarity=0.362  Sum_probs=185.3

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .-.+.|++.++||.|.-++||+|+++.+++.||||++..... ...+.+.+|+..|+.++|||||+++.+|..+..+|+|
T Consensus        23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV  102 (516)
T KOG0582|consen   23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV  102 (516)
T ss_pred             CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence            345789999999999999999999999999999999986543 3457899999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         259 SELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |-||.+|++++.+...  ..+.|.-++.+++++++||.|||.+|.||||||+.||||+++|  .|||+|||.+-.+-..|
T Consensus       103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG--~VkLadFgvsa~l~~~G  180 (516)
T KOG0582|consen  103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDG--TVKLADFGVSASLFDSG  180 (516)
T ss_pred             ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCC--cEEEcCceeeeeecccC
Confidence            9999999999998753  4599999999999999999999999999999999999999877  89999999877664443


Q ss_pred             C-----CCCcccchHHHhhhc------------------------CCCccccCCCCCC-------CCCC------Ccchh
Q psy5279         337 K-----LNPLEYDVRYVRQAL------------------------RHPWLNFADRKPT-------EDTP------KLNTD  374 (1310)
Q Consensus       337 ~-----l~~~~~t~~yv~~~~------------------------r~P~l~~~~~~~~-------~~~p------~~~~~  374 (1310)
                      .     .+++.+|+.|+++..                        .+.-.+|.+..|+       -+.|      -++.+
T Consensus       181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d  260 (516)
T KOG0582|consen  181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKD  260 (516)
T ss_pred             ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChH
Confidence            1     156677776655432                        1111222222211       1112      23445


Q ss_pred             hhhhhcccchhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         375 ALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       375 ~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +.+.+......+++.+++++..+|+|+.+.|.|+|..
T Consensus       261 ~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk  297 (516)
T KOG0582|consen  261 EDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFK  297 (516)
T ss_pred             HhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHh
Confidence            5555555567789999999999999999999999963

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.95  E-value=6e-28  Score=280.21  Aligned_cols=168  Identities=24%  Similarity=0.383  Sum_probs=144.7

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ..+.|++.+.||+|+||.||+|.++.+++.||+|++.+..   ......+.+|+.+++.++||||++++++|.+++.+|+
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM  120 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence            4578999999999999999999999999999999997532   1234457789999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      |||||+||+|.+.+... .+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+...+.
T Consensus       121 v~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~--~~kL~DFG~a~~~~~~~~  197 (370)
T cd05621         121 VMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG--HLKLADFGTCMKMDETGM  197 (370)
T ss_pred             EEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEEEecccceecccCCc
Confidence            99999999999988653 589999999999999999999999999999999999998655  799999999998754332


Q ss_pred             --CCCcccchHHHhhh
Q psy5279         338 --LNPLEYDVRYVRQA  351 (1310)
Q Consensus       338 --l~~~~~t~~yv~~~  351 (1310)
                        ..+.+||+.|+++.
T Consensus       198 ~~~~~~~gt~~Y~aPE  213 (370)
T cd05621         198 VRCDTAVGTPDYISPE  213 (370)
T ss_pred             eecccCCCCcccCCHH
Confidence              23456777776643

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.9e-28  Score=274.42  Aligned_cols=158  Identities=25%  Similarity=0.408  Sum_probs=136.4

Q ss_pred             ecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCCch
Q psy5279         191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGEL  267 (1310)
Q Consensus       191 LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GGeL  267 (1310)
                      ||+|+||.||+|.+..+++.||+|++....   ......+.+|+.+|++++|||||+++++|...+.+|+||||++||+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            799999999999999999999999997532   22344577899999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCCCCcccchH
Q psy5279         268 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKLNPLEYDVR  346 (1310)
Q Consensus       268 ~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l~~~~~t~~  346 (1310)
                      .+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++..... ......+||+.
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~  158 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQG--HIALCDFGLCKLNMKDDDKTNTFCGTPE  158 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC--cEEEEECcccccCccCCCccccccCCcc
Confidence            99998888899999999999999999999999999999999999998655  7999999999864322 22334566666


Q ss_pred             HHhh
Q psy5279         347 YVRQ  350 (1310)
Q Consensus       347 yv~~  350 (1310)
                      |+++
T Consensus       159 y~aP  162 (312)
T cd05585         159 YLAP  162 (312)
T ss_pred             cCCH
Confidence            6553

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.95  E-value=1.7e-27  Score=264.56  Aligned_cols=148  Identities=28%  Similarity=0.432  Sum_probs=131.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      ++|++.+.||+|+||.||+|.++.+++.||+|+++.... .....+.+|+.+|+.++||||+++++++.+++.+|+||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            569999999999999999999999999999999875432 2344577899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +.| +|.+.+...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~~kl~DfG~~~~~~  154 (288)
T cd07871          85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG--ELKLADFGLARAKS  154 (288)
T ss_pred             CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEECcCcceeecc
Confidence            985 8888776544 478999999999999999999999999999999999998665  79999999998653

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.5e-27  Score=275.84  Aligned_cols=148  Identities=24%  Similarity=0.433  Sum_probs=134.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|.+.+.||+|+||.||+|.++.+|+.||||++.+..   ......+.+|+.+|++++|||||+++++|.+.+.+||||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            36889999999999999999999999999999986532   123345788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ||++||+|.+.+.....+++..++.++.|++.||+|||++||+||||||+|||++.++  .+||+|||+|+.+
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~--~~kl~DfGla~~~  151 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGG--HIKLSDFGLSTGF  151 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC--CEEEeeccccccc
Confidence            9999999999998877899999999999999999999999999999999999998655  7999999999754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.95  E-value=3.5e-28  Score=267.10  Aligned_cols=104  Identities=22%  Similarity=0.357  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC-CC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP-IF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~-ys 1027 (1310)
                      ..++.||+.||+|||++|++||||+|+||+++.  +..+||+|||++........ ......+++.|+|||.+.+.. ++
T Consensus       103 ~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  179 (284)
T cd07860         103 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPEILLGCKYYS  179 (284)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEeeccchhhcccCcc-ccccccccccccCCeEEecCCCCC
Confidence            345679999999999999999999999999986  45699999998865432111 112223567899999987654 57


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      .++|+|||||++|+|++|..||.+.+..
T Consensus       180 ~~~Dv~slG~il~~l~tg~~p~~~~~~~  207 (284)
T cd07860         180 TAVDIWSLGCIFAEMVTRRALFPGDSEI  207 (284)
T ss_pred             cHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence            8899999999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.95  E-value=1.3e-28  Score=270.00  Aligned_cols=105  Identities=25%  Similarity=0.426  Sum_probs=85.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.  ++.+||+|||++........ ......++..|+|||++.+ ..++
T Consensus       103 ~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~  179 (286)
T cd07847         103 KKIIWQTLQAVNFCHKHNCIHRDVKPENILITK--QGQIKLCDFGFARILTGPGD-DYTDYVATRWYRAPELLVGDTQYG  179 (286)
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCChhhEEEcC--CCcEEECccccceecCCCcc-cccCcccccccCCHHHHhCCCCcC
Confidence            345679999999999999999999999999975  45799999999876543321 1122345678999999876 4578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++|+|||||++|+|++|..||.+.+..+
T Consensus       180 ~~~Di~slG~i~~~l~~g~~p~~~~~~~~  208 (286)
T cd07847         180 PPVDVWAIGCVFAELLTGQPLWPGKSDVD  208 (286)
T ss_pred             chhhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence            89999999999999999999998766543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.95  E-value=1.5e-28  Score=269.70  Aligned_cols=105  Identities=23%  Similarity=0.364  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      +..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++........ ......+++.|+|||++.+. .+
T Consensus       103 ~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~  179 (285)
T cd07861         103 VKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDN--KGVIKLADFGLARAFGIPVR-VYTHEVVTLWYRAPEVLLGSPRY  179 (285)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcC--CCcEEECcccceeecCCCcc-cccCCcccccccChHHhcCCCCc
Confidence            3456789999999999999999999999999975  45699999999865432211 11122456889999998764 57


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      +.++|+|||||++|+|++|.+||.+.+..
T Consensus       180 ~~~~Dv~slG~il~~l~tg~~~~~~~~~~  208 (285)
T cd07861         180 STPVDIWSIGTIFAEMATKKPLFHGDSEI  208 (285)
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence            88999999999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.95  E-value=2.2e-28  Score=271.14  Aligned_cols=106  Identities=21%  Similarity=0.370  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc---cccCCCCCCcccccccccCC-
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---IHPINTPNPEFAAPEVLAEE- 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~---~~~~~tGtp~Y~APEvl~~~- 1024 (1310)
                      ..++.||+.||.|||++||+|+||||+|||++.  ...+||+|||++.........   ......+++.|+|||.+.+. 
T Consensus       122 ~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  199 (310)
T cd07865         122 KKVMKMLLNGLYYIHRNKILHRDMKAANILITK--DGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGER  199 (310)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC--CCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCc
Confidence            345679999999999999999999999999975  457999999998654321111   11122356789999988765 


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++.++|+|||||++|+|++|.+||.+.+...
T Consensus       200 ~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~  231 (310)
T cd07865         200 DYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH  231 (310)
T ss_pred             ccCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            47889999999999999999999998765443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.95  E-value=4.5e-28  Score=278.02  Aligned_cols=167  Identities=23%  Similarity=0.335  Sum_probs=144.4

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCC-cEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSG-RNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg-~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      -.+.|++.+.||+|+||.||+|.++.++ ..||+|++.+..   ....+.+.+|+.+|+.++|||||++++++.+++.+|
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~  107 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY  107 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence            3467999999999999999999977665 789999986432   223456788999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      +||||++||+|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+... 
T Consensus       108 lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~ikL~DFG~a~~~~~~-  184 (340)
T PTZ00426        108 LVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG--FIKMTDFGFAKVVDTR-  184 (340)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CEEEecCCCCeecCCC-
Confidence            9999999999999998888899999999999999999999999999999999999997654  8999999999876432 


Q ss_pred             CCCCcccchHHHhhh
Q psy5279         337 KLNPLEYDVRYVRQA  351 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~  351 (1310)
                       ..+.+||+.|+++.
T Consensus       185 -~~~~~gt~~y~aPE  198 (340)
T PTZ00426        185 -TYTLCGTPEYIAPE  198 (340)
T ss_pred             -cceecCChhhcCHH
Confidence             23456777776643

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.95  E-value=7.3e-28  Score=276.71  Aligned_cols=149  Identities=26%  Similarity=0.470  Sum_probs=135.9

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|++.+.||+|+||.||+|.++.+|+.||+|++....   ......+.+|+.+|..++||||+++++.|.+.+.+||||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46889999999999999999999999999999997432   223456788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |||+||+|.+.+.+.+.+++..++.++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++.+.
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~--~vkL~DfG~~~~~~  152 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKG--HVKLSDFGLCTGLK  152 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CEEEeeccCCcccc
Confidence            9999999999998888899999999999999999999999999999999999998655  89999999998654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.95  E-value=3.4e-28  Score=275.77  Aligned_cols=159  Identities=26%  Similarity=0.439  Sum_probs=136.1

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGG  265 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GG  265 (1310)
                      +.||+|+||.||+|.++.+|+.||+|++....   ......+.+|+.+|+.++||||++++++|...+.+||||||++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            46999999999999999999999999997532   123345678999999999999999999999999999999999999


Q ss_pred             chHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCcccc
Q psy5279         266 ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEYD  344 (1310)
Q Consensus       266 eL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~t  344 (1310)
                      +|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.... .......++|
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~gt  158 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATMKTFCGT  158 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC--CEEecccHHhccccCCCCccccccCC
Confidence            9999988877899999999999999999999999999999999999998655  799999999986422 2223344566


Q ss_pred             hHHHh
Q psy5279         345 VRYVR  349 (1310)
Q Consensus       345 ~~yv~  349 (1310)
                      +.|++
T Consensus       159 ~~y~a  163 (323)
T cd05595         159 PEYLA  163 (323)
T ss_pred             cCcCC
Confidence            55554

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.95  E-value=1.4e-27  Score=263.15  Aligned_cols=149  Identities=21%  Similarity=0.386  Sum_probs=132.7

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|++.+.||+|+||.||+|+++.+++.||+|++....  ....+.+.+|+.+|+.++||||++++++|...+.+|+|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            46899999999999999999999999999999987542  2335567899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |++++.+.........+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+.
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~--~~kl~Dfg~~~~~~  151 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND--VLKLCDFGFARNLS  151 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--cEEEeeccCccccc
Confidence            999987765554445699999999999999999999999999999999999998655  79999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.95  E-value=3.9e-28  Score=261.48  Aligned_cols=101  Identities=26%  Similarity=0.457  Sum_probs=85.0

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+|+||||+||+++.  ...+||+|||+++........ .....+++.|+|||++.+..++.+
T Consensus       105 ~i~~~l~~al~~lH~~~i~h~dl~~~nili~~--~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~  181 (256)
T cd08529         105 RFFIQILLGLAHLHSKKILHRDIKSLNLFLDA--YDNVKIGDLGVAKLLSDNTNF-ANTIVGTPYYLSPELCEDKPYNEK  181 (256)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCcceEEEeC--CCCEEEcccccceeccCccch-hhccccCccccCHHHhcCCCCCCc
Confidence            34669999999999999999999999999986  456999999998765432221 223356789999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +|+|||||++|+|++|..||...+
T Consensus       182 ~Di~slG~il~~l~~g~~p~~~~~  205 (256)
T cd08529         182 SDVWALGVVLYECCTGKHPFDANN  205 (256)
T ss_pred             cchHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999997654

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.95  E-value=9.8e-28  Score=271.67  Aligned_cols=160  Identities=27%  Similarity=0.436  Sum_probs=137.7

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGG  265 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GG  265 (1310)
                      +.||+|+||.||+|.++.+|+.||+|++.+..   ......+.+|+.+|+.++||||++++++|...+.+||||||++||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999999999999999997532   122345678999999999999999999999999999999999999


Q ss_pred             chHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         266 ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       266 eL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      +|...+.....+++..+..++.||+.||+|||+ +||+||||||+|||++.++  .+||+|||+++.... .......++
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKTFCG  158 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC--CEEEecCCCCeecCCCCcccccccC
Confidence            999998877789999999999999999999997 8999999999999998655  799999999986432 223344567


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (325)
T cd05594         159 TPEYLAP  165 (325)
T ss_pred             CcccCCH
Confidence            7777654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.5e-28  Score=269.97  Aligned_cols=92  Identities=30%  Similarity=0.412  Sum_probs=75.6

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcc-hhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-TLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      .|.+.|+++..|..|.||.|.++.-+. ++..+|.|.+..... .......|...|++|+|++|..+++.+...    +.
T Consensus         2 ~~~~~~~i~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~   76 (280)
T cd06611           2 NPNDIWEIIGELGDGAFGKVYKAQHKE-TGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYE----NK   76 (280)
T ss_pred             CchhHHHHHHHhcCCCCceEEEEEEcC-CCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC----Ce
Confidence            377889999999999999998886554 788999999876543 344677899999999999999999988765    45


Q ss_pred             hhHHHHhhcCchhhhhhh
Q psy5279         672 AVLVMEKLQGADVLSYLS  689 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~  689 (1310)
                      ..+|||++.|.++..++.
T Consensus        77 ~~lv~e~~~~~~L~~~~~   94 (280)
T cd06611          77 LWILIEFCDGGALDSIML   94 (280)
T ss_pred             EEEEeeccCCCcHHHHHH
Confidence            678999999988766653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.8e-27  Score=270.36  Aligned_cols=151  Identities=27%  Similarity=0.528  Sum_probs=137.4

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|.+.+.||+|+||.||+|.+..+|+.||||++.+..   ......+.+|+.+|..++||||+++++++.+++.+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            46899999999999999999999999999999997532   233456788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ||++||+|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.+...
T Consensus        81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~--~~kL~Dfg~~~~~~~~  154 (350)
T cd05573          81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADG--HIKLADFGLCKKMNKA  154 (350)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEeecCCCCccCccc
Confidence            9999999999998877899999999999999999999999999999999999998665  7999999999876543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.95  E-value=3.6e-28  Score=272.83  Aligned_cols=100  Identities=24%  Similarity=0.388  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.||+.||.|||+ +|++||||||+|||++.  +..+||+|||++.......   .....+++.|+|||++.+..++.
T Consensus       103 ~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~  177 (308)
T cd06615         103 KISIAVLRGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYTV  177 (308)
T ss_pred             HHHHHHHHHHHHHHhhCCEEECCCChHHEEEec--CCcEEEccCCCcccccccc---cccCCCCcCccChhHhcCCCCCc
Confidence            346799999999998 69999999999999975  4569999999886543211   12235678999999998888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|+|||||++|+|++|..||.+.+.
T Consensus       178 ~~DiwslG~~l~~l~~g~~p~~~~~~  203 (308)
T cd06615         178 QSDIWSLGLSLVEMAIGRYPIPPPDA  203 (308)
T ss_pred             cchHHHHHHHHHHHHhCCCCCCCcch
Confidence            99999999999999999999976543

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0610|consensus

Probab=99.95  E-value=6.8e-28  Score=274.51  Aligned_cols=241  Identities=24%  Similarity=0.297  Sum_probs=184.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHH---HHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKS---LFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~---~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|++++.||.|.-|+||+|..+.++..+|+|+|.+.....++   .+..|-+||+.++||.+++||..|+++...+|||
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            6788999999999999999999999999999999876443333   3556899999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC--
Q psy5279         260 ELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF--  335 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~--  335 (1310)
                      |||+||+|.....++  ..|+|..+++|+.+++.||+|||.+|||+||||||||||-++|  ||-|+||-|+......  
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredG--HIMLsDFDLS~~~~~~Pt  234 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDG--HIMLSDFDLSLRCPVSPT  234 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCC--cEEeeeccccccCCCCCe
Confidence            999999998888765  4599999999999999999999999999999999999998776  9999999998754210  


Q ss_pred             --------------------------------C-----------------------CCCCcccchHHHhh----------
Q psy5279         336 --------------------------------G-----------------------KLNPLEYDVRYVRQ----------  350 (1310)
Q Consensus       336 --------------------------------~-----------------------~l~~~~~t~~yv~~----------  350 (1310)
                                                      .                       ..+.++||.+|+++          
T Consensus       235 ~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgs  314 (459)
T KOG0610|consen  235 LVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGS  314 (459)
T ss_pred             eeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCc
Confidence                                            0                       00124566666653          


Q ss_pred             ---------------hcCCCccccCCCCCCCCC----CCcchhhhhhhcccchhhchhhhhhhcccCCC----CCCccCC
Q psy5279         351 ---------------ALRHPWLNFADRKPTEDT----PKLNTDALRNYYNLYKDWYGNAAVRRYYRRRP----LNSCYTH  407 (1310)
Q Consensus       351 ---------------~~r~P~l~~~~~~~~~~~----p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~----~~~cl~h  407 (1310)
                                     .+..||-+-+.+.+..+.    +.+....  .+...++|.+..+++++..+|.-    +.++-+|
T Consensus       315 AVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~H  392 (459)
T KOG0610|consen  315 AVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRH  392 (459)
T ss_pred             hhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhccccchHHhhcC
Confidence                           233455554444443221    1110000  23355689999999999999976    8899999


Q ss_pred             CcceecC--CCCCCCCCCCCcc
Q psy5279         408 PSRMIYP--PGTQFTPEPTPDK  427 (1310)
Q Consensus       408 pw~~~~~--~~~~~tp~~~p~~  427 (1310)
                      |+..+..  ---+.+|+.+|..
T Consensus       393 pFF~gVnWaLir~~~PP~iP~~  414 (459)
T KOG0610|consen  393 PFFEGVNWALIRCARPPEIPKP  414 (459)
T ss_pred             ccccCCChhheeccCCCcCCCc
Confidence            9964322  3344555556665

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.95  E-value=4.2e-28  Score=274.57  Aligned_cols=104  Identities=24%  Similarity=0.436  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc------cccCCCCCCccccccccc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL------IHPINTPNPEFAAPEVLA 1022 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~------~~~~~tGtp~Y~APEvl~ 1022 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..++++|||.+......+..      ......++..|+|||++.
T Consensus       104 ~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  181 (327)
T cd08227         104 AYILQGVLKALDYIHHMGYVHRSVKASHILISV--DGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQ  181 (327)
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCChhhEEEec--CCcEEEcccchhhccccccccccccccccccccceecccChHHhh
Confidence            345679999999999999999999999999986  456899999865433211110      011123456799999997


Q ss_pred             C--CCCCCccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1023 E--EPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1023 ~--~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      +  ..++.++|||||||++|+|++|..||.....
T Consensus       182 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  215 (327)
T cd08227         182 QNLQGYDAKSDIYSVGITACELANGHVPFKDMPA  215 (327)
T ss_pred             cccCCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence            6  4688999999999999999999999976544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.95  E-value=3.3e-28  Score=269.71  Aligned_cols=89  Identities=29%  Similarity=0.388  Sum_probs=72.4

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccC-cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchh
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS-HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIA  672 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  672 (1310)
                      |.++|+++..|..|.||.|.++..+ .++..++.|.+.-. .+.......|...++.+.|++|..+.+.+...    +..
T Consensus        10 ~~~~y~i~~~lg~g~~g~vy~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~   84 (292)
T cd06644          10 PNEVWEIIGELGDGAFGKVYKAKNK-ETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWD----GKL   84 (292)
T ss_pred             cchhhhhhheecCCCCeEEEEEEEC-CCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC----CeE
Confidence            5689999999999999999988444 47889999998643 33456677899999999999999998887654    567


Q ss_pred             hHHHHhhcCchhhhh
Q psy5279         673 VLVMEKLQGADVLSY  687 (1310)
Q Consensus       673 ~~~~~~~~~~~~~~~  687 (1310)
                      .+|||++.|..+..+
T Consensus        85 ~lv~e~~~~~~l~~~   99 (292)
T cd06644          85 WIMIEFCPGGAVDAI   99 (292)
T ss_pred             EEEEecCCCCcHHHH
Confidence            889999998876544

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0582|consensus

Probab=99.95  E-value=8.5e-28  Score=275.35  Aligned_cols=154  Identities=27%  Similarity=0.369  Sum_probs=126.2

Q ss_pred             eecceeeeeeeCCEEEEEE-eccCCCcceeeecccCCcccccccccCC---CchhHHHHHHHHHHHHHHHHHCCceeccc
Q psy5279         897 REKPITIPVVIGDKLEMKC-LAVGEPKPVIQWFKLGTSTLCYLPIVIP---TTHKDAYCVTSVLDGLQYLHWRGLCHLNI  972 (1310)
Q Consensus       897 rE~~~~~~l~~g~~l~~~~-l~~G~p~~vi~~f~~g~~l~~~L~~~i~---~~~~~~~i~~QIl~AL~yLHs~gIVHRDL  972 (1310)
                      ||+..|--+.|++++.+.| ..+++...++.-|..+|+++.++....+   ++...+.++++++.||.|||.+|.|||||
T Consensus        73 kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdv  152 (516)
T KOG0582|consen   73 KEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDV  152 (516)
T ss_pred             HHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceeccc
Confidence            4555566677999998888 5667777888888889998888866544   45667889999999999999999999999


Q ss_pred             CCCcEEEeecCCCcEEEEeeccceeeccCCcc--cc-cCCCCCCcccccccccC--CCCCCccchhHHHHHHHHHhcCCC
Q psy5279         973 EPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IH-PINTPNPEFAAPEVLAE--EPIFPQTDVWSAGVLAYVLLSGAS 1047 (1310)
Q Consensus       973 KPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~-~~~tGtp~Y~APEvl~~--~~ys~ksDIWSLGViLyeLLtG~~ 1047 (1310)
                      |+.||||++  ++.|||+|||++..+...|..  .. ....|+|+|||||++..  .+|+.|+||||||+...||.+|..
T Consensus       153 KAgnILi~~--dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~a  230 (516)
T KOG0582|consen  153 KAGNILIDS--DGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHA  230 (516)
T ss_pred             ccccEEEcC--CCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCC
Confidence            999999987  567999999987655444422  11 44578999999999654  379999999999999999999999


Q ss_pred             CCCCC
Q psy5279        1048 PFRGQ 1052 (1310)
Q Consensus      1048 PF~g~ 1052 (1310)
                      ||...
T Consensus       231 Pf~k~  235 (516)
T KOG0582|consen  231 PFSKY  235 (516)
T ss_pred             CcccC
Confidence            99643

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.95  E-value=2e-28  Score=269.67  Aligned_cols=88  Identities=31%  Similarity=0.385  Sum_probs=68.9

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeecccCc-chhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchhh
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH-DTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAV  673 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  673 (1310)
                      .+.|+.+.+|..|.||.|.++..+. ++..++.|.+.... ........|...++.++|++|..+++.|...    +...
T Consensus         4 ~~~~~i~~~lg~g~~g~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~----~~~~   78 (282)
T cd06643           4 EEFWEIIGELGDGAFGKVYKAQNKE-TGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE----NNLW   78 (282)
T ss_pred             HHHHHHHhhcccCCCeEEEEEEECC-CCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC----CEEE
Confidence            3558899999999999999886655 67788888886543 3455567789999999999999998887654    5567


Q ss_pred             HHHHhhcCchhhhh
Q psy5279         674 LVMEKLQGADVLSY  687 (1310)
Q Consensus       674 ~~~~~~~~~~~~~~  687 (1310)
                      +|||++.|..+..+
T Consensus        79 ~v~e~~~~~~l~~~   92 (282)
T cd06643          79 ILIEFCAGGAVDAV   92 (282)
T ss_pred             EEEEecCCCcHHHH
Confidence            88998888765443

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.95  E-value=2e-28  Score=270.66  Aligned_cols=100  Identities=24%  Similarity=0.407  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||++........  .....|++.|+|||++.+..++.
T Consensus        98 ~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~--~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~  173 (277)
T cd05607          98 IHYSAQITCGILHLHSMDIVYRDMKPENVLLDD--QGNCRLSDLGLAVELKDGKT--ITQRAGTNGYMAPEILKEEPYSY  173 (277)
T ss_pred             HHHHHHHHHHHHHHHHCCEEEccCChHhEEEcC--CCCEEEeeceeeeecCCCce--eeccCCCCCccCHHHHccCCCCC
Confidence            345679999999999999999999999999985  45699999999876543221  12235678999999999989999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|+||+||++|+|++|..||.+.
T Consensus       174 ~~DvwslGv~l~el~~g~~p~~~~  197 (277)
T cd05607         174 PVDWFAMGCSIYEMVAGRTPFKDH  197 (277)
T ss_pred             chhHHHHHHHHHHHHhCCCCCCCC
Confidence            999999999999999999999653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.95  E-value=3.8e-28  Score=267.15  Aligned_cols=94  Identities=23%  Similarity=0.439  Sum_probs=76.4

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhh-chhhHHHHHHhcCCC-Ccccch
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSL-RHERIASLLEAYKPS-TTASNI  671 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~  671 (1310)
                      ++++|+++..|.+|.||+|.+|..+. +++.+|.|++...+....+...|+..+++| +|++|..+++.|.-. ....+.
T Consensus        16 ~~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~   94 (286)
T cd06638          16 PSDTWEIIETIGKGTYGKVFKVLNKK-NGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ   94 (286)
T ss_pred             cccceeeeeeeccCCCcEEEEEEECC-CCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence            67899999999999999998876654 788999999887766667788899999999 699999999877422 123467


Q ss_pred             hhHHHHhhcCchhhhhh
Q psy5279         672 AVLVMEKLQGADVLSYL  688 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~  688 (1310)
                      ..||||++.|..+..++
T Consensus        95 ~~lv~e~~~~~~L~~~l  111 (286)
T cd06638          95 LWLVLELCNGGSVTDLV  111 (286)
T ss_pred             EEEEEeecCCCCHHHHH
Confidence            88999999998775544

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.95  E-value=1.6e-27  Score=264.54  Aligned_cols=163  Identities=26%  Similarity=0.407  Sum_probs=138.1

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      |++.+.||+|+||.||+|.++.+|+.||+|.+.....   .....+.+|+.+|++++||||++++++|.+.+.+++||||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            6788999999999999999999999999999875422   2234577899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC
Q psy5279         262 AGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN  339 (1310)
Q Consensus       262 ~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~  339 (1310)
                      ++||+|...+...  ..+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+|+.+.......
T Consensus        82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~~  159 (285)
T cd05631          82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRG--HIRISDLGLAVQIPEGETVR  159 (285)
T ss_pred             cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEeeCCCcEEcCCCCeec
Confidence            9999998777543  3589999999999999999999999999999999999998655  79999999998765433333


Q ss_pred             CcccchHHHh
Q psy5279         340 PLEYDVRYVR  349 (1310)
Q Consensus       340 ~~~~t~~yv~  349 (1310)
                      ...+|+.|++
T Consensus       160 ~~~g~~~y~a  169 (285)
T cd05631         160 GRVGTVGYMA  169 (285)
T ss_pred             CCCCCCCccC
Confidence            3445555544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.95  E-value=1.7e-27  Score=275.99  Aligned_cols=166  Identities=24%  Similarity=0.406  Sum_probs=142.6

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .+.|++.+.||+|+||.||+|.++.+++.||+|++.+..   ......+.+|+.+|+.++||||+++++++.+++.+|+|
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv  121 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV  121 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence            467999999999999999999999999999999997432   12334577899999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC-
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK-  337 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~-  337 (1310)
                      ||||+||+|.+.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.....+. 
T Consensus       122 ~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~~kL~DfG~~~~~~~~~~~  198 (370)
T cd05596         122 MEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMDANGMV  198 (370)
T ss_pred             EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC--CEEEEeccceeeccCCCcc
Confidence            999999999988764 4589999999999999999999999999999999999998655  899999999987754332 


Q ss_pred             -CCCcccchHHHhh
Q psy5279         338 -LNPLEYDVRYVRQ  350 (1310)
Q Consensus       338 -l~~~~~t~~yv~~  350 (1310)
                       ....+||+.|+++
T Consensus       199 ~~~~~~gt~~y~aP  212 (370)
T cd05596         199 RCDTAVGTPDYISP  212 (370)
T ss_pred             cCCCCCCCcCeECH
Confidence             2345667666654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0579|consensus

Probab=99.95  E-value=7.3e-28  Score=281.02  Aligned_cols=87  Identities=34%  Similarity=0.445  Sum_probs=77.4

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeeccc-CcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY-SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      .|.|-+..|-|+--|-||-|.||..| .|.-+.|||.++- +.+.|....-|.+.|.+..||+|..|+.||--.    |-
T Consensus        29 nP~d~WeIiGELGDGAFGKVyKA~nk-et~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~e----nk  103 (1187)
T KOG0579|consen   29 NPRDHWEIIGELGDGAFGKVYKAVNK-ETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFE----NK  103 (1187)
T ss_pred             CHHHHHHHHhhhcCccchhhhhhhcc-cchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc----Cc
Confidence            36788899999999999999999999 5999999999986 567788899999999999999999999999877    66


Q ss_pred             hhHHHHhhcCchh
Q psy5279         672 AVLVMEKLQGADV  684 (1310)
Q Consensus       672 ~~~~~~~~~~~~~  684 (1310)
                      +-++.|||.|.-|
T Consensus       104 LwiliEFC~GGAV  116 (1187)
T KOG0579|consen  104 LWILIEFCGGGAV  116 (1187)
T ss_pred             eEEEEeecCCchH
Confidence            7778899998754

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.95  E-value=6.8e-28  Score=267.11  Aligned_cols=104  Identities=26%  Similarity=0.369  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys~ 1028 (1310)
                      .++.||++||.|||++||+|+||||+|||++.  ++.+||+|||++......... .....+++.|+|||.+.+ ..++.
T Consensus       106 ~~~~qi~~al~~lH~~~i~H~dl~p~nill~~--~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~  182 (298)
T cd07841         106 SYMLMTLRGLEYLHSNWILHRDLKPNNLLIAS--DGVLKLADFGLARSFGSPNRK-MTHQVVTRWYRAPELLFGARHYGV  182 (298)
T ss_pred             HHHHHHHHHHHHHHhCCeeecCCChhhEEEcC--CCCEEEccceeeeeccCCCcc-ccccccceeeeCHHHHhCCCCCCc
Confidence            35679999999999999999999999999986  457999999998765432211 122234678999999865 45788


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++|+|||||++|+|++|.+||.+.+..+
T Consensus       183 ~~Dv~slG~il~e~~~g~~~~~~~~~~~  210 (298)
T cd07841         183 GVDMWSVGCIFAELLLRVPFLPGDSDID  210 (298)
T ss_pred             HHHHHHHHHHHHHHHcCCccccCCccHH
Confidence            9999999999999999998998765433

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.95  E-value=4.2e-27  Score=266.38  Aligned_cols=166  Identities=27%  Similarity=0.435  Sum_probs=143.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|.+.+.||+|+||.||+|.++.+|+.||+|+++....   .....+.+|+.+|+.++||||+++++++...+.+||||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            368999999999999999999999999999999975422   23456788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      ||++||+|.+.+.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+......
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~--~~kL~Dfg~a~~~~~~~~~  158 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTG--HIKLADFGSAARLTANKMV  158 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCC--CEEeccCCCCeECCCCCce
Confidence            999999999998775 5799999999999999999999999999999999999998655  7999999999877543322


Q ss_pred             --CCcccchHHHhh
Q psy5279         339 --NPLEYDVRYVRQ  350 (1310)
Q Consensus       339 --~~~~~t~~yv~~  350 (1310)
                        ...++|+.|+++
T Consensus       159 ~~~~~~gt~~y~aP  172 (330)
T cd05601         159 NSKLPVGTPDYIAP  172 (330)
T ss_pred             eeecccCCccccCH
Confidence              223556666554

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.95  E-value=4.2e-28  Score=267.90  Aligned_cols=102  Identities=23%  Similarity=0.434  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++........ ......+++.|+|||++.+ ..++
T Consensus       106 ~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~  182 (291)
T cd07844         106 RLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISE--RGELKLADFGLARAKSVPSK-TYSNEVVTLWYRPPDVLLGSTEYS  182 (291)
T ss_pred             HHHHHHHHHHHHHHHhCCeecccCCHHHEEEcC--CCCEEECccccccccCCCCc-cccccccccccCCcHHhhcCcccC
Confidence            345679999999999999999999999999986  45699999998865322111 1111234678999999876 4588


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      .++||||+||++|+|++|..||.+..
T Consensus       183 ~~~Dv~slG~il~~l~~g~~~~~~~~  208 (291)
T cd07844         183 TSLDMWGVGCIFYEMATGRPLFPGST  208 (291)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence            89999999999999999999997654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.95  E-value=4.4e-28  Score=268.16  Aligned_cols=95  Identities=24%  Similarity=0.428  Sum_probs=78.0

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhh-chhhHHHHHHhcCCCCc-ccc
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSL-RHERIASLLEAYKPSTT-ASN  670 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~  670 (1310)
                      .+++.|+++..|..|.||+|.+|..+. ++..+|.|.+........++..|+..+++| .|++|..+++.+..... ..+
T Consensus        19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   97 (291)
T cd06639          19 DPTDTWEIIETIGKGTYGKVYKVTNKK-DGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGG   97 (291)
T ss_pred             CCCCCeEEEEEeecCCCeEEEEEEECC-CCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCC
Confidence            357889999999999999998876554 788899999988777778888999999999 89999999988865432 234


Q ss_pred             hhhHHHHhhcCchhhhhh
Q psy5279         671 IAVLVMEKLQGADVLSYL  688 (1310)
Q Consensus       671 ~~~~~~~~~~~~~~~~~~  688 (1310)
                      ...+|||++.|.++..++
T Consensus        98 ~~~lv~ey~~~~sL~~~~  115 (291)
T cd06639          98 QLWLVLELCNGGSVTELV  115 (291)
T ss_pred             eeEEEEEECCCCcHHHHH
Confidence            578999999998765544

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.95  E-value=3.7e-27  Score=268.04  Aligned_cols=159  Identities=23%  Similarity=0.366  Sum_probs=136.4

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||.||+|.++.+++.||+|++++..   ......+.+|+.+++.+ +||||++++++|.+.+.+|||||||+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            46999999999999999999999999997532   22345577899999998 799999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec-CCCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT-SFGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~-~~~~l~~~~~  343 (1310)
                      |+|...+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++... ........+|
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG--HIKLTDYGMCKEGIRPGDTTSTFCG  158 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEECcCccccccccCCCccccccC
Confidence            99999888777899999999999999999999999999999999999998655  79999999998532 2223334566


Q ss_pred             chHHHh
Q psy5279         344 DVRYVR  349 (1310)
Q Consensus       344 t~~yv~  349 (1310)
                      |+.|++
T Consensus       159 t~~y~a  164 (329)
T cd05588         159 TPNYIA  164 (329)
T ss_pred             CccccC
Confidence            665554

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.95  E-value=1.3e-27  Score=269.42  Aligned_cols=107  Identities=25%  Similarity=0.432  Sum_probs=88.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccCC-C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEE-P 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~-~ 1025 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.++|+|||++........  .......+++.|+|||++.+. .
T Consensus       106 ~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~--~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  183 (330)
T cd07834         106 QYFLYQILRGLKYLHSANVIHRDLKPSNILVNS--NCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSR  183 (330)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEcccCceEeecccccccccccccccccCcCCceeeecccC
Confidence            445679999999999999999999999999986  46799999999876543221  111223457889999999888 7


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ++.++|+|||||++|+|++|.+||.+.+..+.
T Consensus       184 ~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~  215 (330)
T cd07834         184 YTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ  215 (330)
T ss_pred             CCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH
Confidence            88999999999999999999999988775544

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.95  E-value=7.7e-28  Score=266.92  Aligned_cols=107  Identities=19%  Similarity=0.319  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccc----------ccCCCCCCcccc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI----------HPINTPNPEFAA 1017 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~----------~~~~tGtp~Y~A 1017 (1310)
                      +..++.||++||.|||++||+||||||+|||++.  +..+||+|||++..........          .....+++.|+|
T Consensus       117 ~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a  194 (311)
T cd07866         117 IKCYMLQLLEGINYLHENHILHRDIKAANILIDN--QGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRP  194 (311)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCC
Confidence            3456779999999999999999999999999986  4579999999986543211100          011234678999


Q ss_pred             cccccCC-CCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1018 PEVLAEE-PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1018 PEvl~~~-~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ||.+.+. .++.++|+|||||++|+|++|.+||.+.+...
T Consensus       195 PE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~  234 (311)
T cd07866         195 PELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID  234 (311)
T ss_pred             hHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            9988654 57889999999999999999999998876544

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.95  E-value=1.8e-27  Score=269.56  Aligned_cols=160  Identities=25%  Similarity=0.364  Sum_probs=136.6

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||.||+|.++.+++.||+|++.+..   ......+.+|+.++..+ +||||++++++|...+.+|+||||++|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999999999999999997531   22344567888888876 699999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l~~~~~  343 (1310)
                      |+|...+.+...+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++..... ......+|
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~--~~kL~DfG~~~~~~~~~~~~~~~~g  158 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG--HCKLADFGMCKEGIFNGKTTSTFCG  158 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeeCCCCeecCcCCCccccccc
Confidence            99999988877899999999999999999999999999999999999998665  7999999999864322 23344566


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (320)
T cd05590         159 TPDYIAP  165 (320)
T ss_pred             CccccCH
Confidence            7766654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=2.5e-28  Score=308.64  Aligned_cols=93  Identities=20%  Similarity=0.360  Sum_probs=77.5

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCc---chhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccc
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH---DTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASN  670 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  670 (1310)
                      ..+.|.++..|-+|.||.|..|..+. ++..+|.|++.+..   ....++..|+..|+.|+|++|..+++.|....  ..
T Consensus        11 ~l~~YeIl~kLG~GgFGtVYLAkdk~-tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~--~~   87 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFGEVFLVKHKR-TQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA--NQ   87 (1021)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECC-CCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC--CC
Confidence            45789999999999999999988776 88899999998653   34566788999999999999999999885432  24


Q ss_pred             hhhHHHHhhcCchhhhhhh
Q psy5279         671 IAVLVMEKLQGADVLSYLS  689 (1310)
Q Consensus       671 ~~~~~~~~~~~~~~~~~~~  689 (1310)
                      ...||||||.|.++..+|.
T Consensus        88 ~lyIVMEY~~gGSL~~lL~  106 (1021)
T PTZ00266         88 KLYILMEFCDAGDLSRNIQ  106 (1021)
T ss_pred             EEEEEEeCCCCCcHHHHHH
Confidence            6778999999998877663

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.94  E-value=7.8e-28  Score=273.32  Aligned_cols=104  Identities=22%  Similarity=0.442  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccc--ccCCCCCCcccccccccC-CC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI--HPINTPNPEFAAPEVLAE-EP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~--~~~~tGtp~Y~APEvl~~-~~ 1025 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ...+||+|||++..........  .....+++.|+|||++.+ ..
T Consensus       109 ~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  186 (336)
T cd07849         109 QYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--NCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKG  186 (336)
T ss_pred             HHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC--CCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCC
Confidence            445679999999999999999999999999975  4569999999987653221111  112346789999998765 46


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++.++|+||+||++|+|++|++||.+.+.
T Consensus       187 ~~~~~DvwslGvil~el~~G~~~f~~~~~  215 (336)
T cd07849         187 YTKAIDIWSVGCILAEMLSNRPLFPGKDY  215 (336)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            88899999999999999999999987653

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.94  E-value=1.8e-27  Score=271.70  Aligned_cols=102  Identities=25%  Similarity=0.514  Sum_probs=83.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.  ++.+||+|||++......    .....+++.|+|||++.+. .++
T Consensus       121 ~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~--~~~~kL~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~  194 (343)
T cd07851         121 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE--DCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYN  194 (343)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEcccccccccccc----ccCCcccccccCHHHHhCCCCCC
Confidence            445679999999999999999999999999986  456999999998754322    1122456889999998653 678


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++|+|||||++|+|++|..||.+.+...
T Consensus       195 ~~~DvwslGv~l~elltg~~pf~~~~~~~  223 (343)
T cd07851         195 QTVDIWSVGCIMAELLTGKTLFPGSDHID  223 (343)
T ss_pred             chHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            89999999999999999999998765443

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.94  E-value=6.1e-27  Score=264.03  Aligned_cols=147  Identities=22%  Similarity=0.386  Sum_probs=129.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-----eEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-----SFT  256 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-----~ly  256 (1310)
                      +|++.+.||+|+||.||+|+++.+|+.||||++....  ......+.+|+.+|+.++||||+++++++...+     .+|
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            5899999999999999999999999999999986432  223345789999999999999999999886543     589


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +|||||. ++|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+...
T Consensus        81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~kL~Dfg~~~~~~  154 (338)
T cd07859          81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC--KLKICDFGLARVAF  154 (338)
T ss_pred             EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--cEEEccCccccccc
Confidence            9999996 68888888777899999999999999999999999999999999999998655  79999999998653

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.94  E-value=2.7e-27  Score=267.95  Aligned_cols=165  Identities=20%  Similarity=0.326  Sum_probs=139.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCC-CcceEEEEEEeCCeEEEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHR-NLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HP-NIVkL~d~f~~~~~lyLVm  259 (1310)
                      .|++.+.||+|+||.||+|.+..+++.||+|++.+..   ....+.+..|+.++..+.|+ +|++++++|...+.+|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            4789999999999999999999999999999997532   23345577899999999765 5889999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l  338 (1310)
                      ||++||+|...+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.... ....
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~  158 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG--HIKIADFGMCKENIFGGKTT  158 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCC--CEEEeecCcceecCCCCCce
Confidence            9999999999998877899999999999999999999999999999999999998655  799999999975422 2223


Q ss_pred             CCcccchHHHhh
Q psy5279         339 NPLEYDVRYVRQ  350 (1310)
Q Consensus       339 ~~~~~t~~yv~~  350 (1310)
                      ...+||+.|+++
T Consensus       159 ~~~~gt~~y~aP  170 (324)
T cd05587         159 RTFCGTPDYIAP  170 (324)
T ss_pred             eeecCCccccCh
Confidence            344566555543

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.94  E-value=8.9e-28  Score=265.97  Aligned_cols=106  Identities=22%  Similarity=0.294  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC-CC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP-IF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~-ys 1027 (1310)
                      ..++.||+.||+|||++||+|+||||+|||++.  .+.+||+|||++......... .....+++.|+|||.+.+.. ++
T Consensus       109 ~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~--~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  185 (293)
T cd07843         109 KCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNN--RGILKICDFGLAREYGSPLKP-YTQLVVTLWYRAPELLLGAKEYS  185 (293)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC--CCcEEEeecCceeeccCCccc-cccccccccccCchhhcCCcccc
Confidence            445679999999999999999999999999986  456999999998765432111 11223568899999987654 67


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++|+|||||++|+|++|.+||.+.+....
T Consensus       186 ~~~Di~slG~~l~~l~~g~~~f~~~~~~~~  215 (293)
T cd07843         186 TAIDMWSVGCIFAELLTKKPLFPGKSEIDQ  215 (293)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            899999999999999999999987765443

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.94  E-value=1.1e-27  Score=264.76  Aligned_cols=107  Identities=22%  Similarity=0.316  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+||+++. ....+||+|||++......... .....+++.|+|||++.+ ..+
T Consensus       112 ~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~-~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~  189 (295)
T cd07837         112 IKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK-QKGLLKIADLGLGRAFSIPVKS-YTHEIVTLWYRAPEVLLGSTHY  189 (295)
T ss_pred             HHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec-CCCeEEEeecccceecCCCccc-cCCcccccCCCChHHhhCCCCC
Confidence            3456779999999999999999999999999985 2457999999998754321111 112235688999999865 457


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      +.++|+|||||++|+|++|..||.+.+..+
T Consensus       190 ~~~~Di~slG~~l~~l~~g~~~~~~~~~~~  219 (295)
T cd07837         190 STPVDIWSVGCIFAEMSRKQPLFPGDSELQ  219 (295)
T ss_pred             CchHHHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence            889999999999999999999998865543

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG4236|consensus

Probab=99.94  E-value=6.3e-28  Score=277.99  Aligned_cols=164  Identities=27%  Similarity=0.493  Sum_probs=128.1

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec-CCCcEEEEeeccceeeccCCcccccCCCCCCcccccccc
Q psy5279         943 PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVL 1021 (1310)
Q Consensus       943 ~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~-~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl 1021 (1310)
                      ..+..-.+++.||+.||.|||.+||||+||||||||+.+. ...++||||||+|+.+....-  .....|||.|.|||++
T Consensus       661 L~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF--RrsVVGTPAYLaPEVL  738 (888)
T KOG4236|consen  661 LPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF--RRSVVGTPAYLAPEVL  738 (888)
T ss_pred             chHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh--hhhhcCCccccCHHHH
Confidence            3455678899999999999999999999999999999874 346899999999998765332  2233567888888776


Q ss_pred             cCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhC
Q psy5279        1022 AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNID 1101 (1310)
Q Consensus      1022 ~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~ 1101 (1310)
                      ..++                                                                            
T Consensus       739 rnkG----------------------------------------------------------------------------  742 (888)
T KOG4236|consen  739 RNKG----------------------------------------------------------------------------  742 (888)
T ss_pred             hhcc----------------------------------------------------------------------------
Confidence            5544                                                                            


Q ss_pred             CCcccccccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCCh
Q psy5279        1102 HEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1181 (1310)
Q Consensus      1102 H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~ 1181 (1310)
                                                                         |....|+||+|||+|+-|+|..||.-+  
T Consensus       743 ---------------------------------------------------yNrSLDMWSVGVIiYVsLSGTFPFNEd--  769 (888)
T KOG4236|consen  743 ---------------------------------------------------YNRSLDMWSVGVIIYVSLSGTFPFNED--  769 (888)
T ss_pred             ---------------------------------------------------ccccccceeeeEEEEEEecccccCCCc--
Confidence                                                               444557777777777777777777432  


Q ss_pred             hhhhhcccccccccc-cchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCCch
Q psy5279        1182 PETRQNVNFVRYRFE-YLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237 (1310)
Q Consensus      1182 ~e~~~~I~~~~~~f~-~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~~~ 1237 (1310)
                      +++-..|..+.+.|| ..|++||++|.|||..||++.-++|.|++++|.|||++.-+
T Consensus       770 EdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq  826 (888)
T KOG4236|consen  770 EDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ  826 (888)
T ss_pred             cchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence            223344556666775 67999999999999999999999999999999999998654

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.94  E-value=8.1e-27  Score=264.27  Aligned_cols=165  Identities=24%  Similarity=0.457  Sum_probs=140.4

Q ss_pred             CeeeeceecccCceEEEEEEEc---CCCcEEEEEEEecCC----cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVER---SSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k---~Tg~~vAIKiI~~~~----~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~l  255 (1310)
                      .|++.+.||+|+||+||+|.+.   .+|+.||+|++.+..    ....+.+.+|+.+|+.+ +||||++++++|..++.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            4889999999999999998764   589999999986432    12334577899999999 599999999999999999


Q ss_pred             EEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         256 TIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |+||||++||+|.+.+.....+++.+++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++.....
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~--~~kl~DfG~~~~~~~~  158 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG--HVVLTDFGLSKEFLSE  158 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC--CEEEeeCcCCcccccc
Confidence            99999999999999998877899999999999999999999999999999999999998665  7999999999875432


Q ss_pred             C--CCCCcccchHHHhh
Q psy5279         336 G--KLNPLEYDVRYVRQ  350 (1310)
Q Consensus       336 ~--~l~~~~~t~~yv~~  350 (1310)
                      .  .....+||+.|+++
T Consensus       159 ~~~~~~~~~gt~~y~aP  175 (332)
T cd05614         159 EKERTYSFCGTIEYMAP  175 (332)
T ss_pred             CCCccccccCCccccCH
Confidence            2  22335667666654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.94  E-value=4.8e-27  Score=272.56  Aligned_cols=168  Identities=23%  Similarity=0.373  Sum_probs=144.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      -.+.|++.+.||+|+||.||+|.++.+++.||+|++.+..   ......+.+|+.+|+.++||||+++++++.+.+.+|+
T Consensus        41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (371)
T cd05622          41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM  120 (371)
T ss_pred             chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            3478999999999999999999999999999999996432   1234457789999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      |||||+||+|.+.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+...+.
T Consensus       121 v~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~--~ikL~DfG~a~~~~~~~~  197 (371)
T cd05622         121 VMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGM  197 (371)
T ss_pred             EEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC--CEEEEeCCceeEcCcCCc
Confidence            9999999999988865 4589999999999999999999999999999999999998655  799999999998754332


Q ss_pred             --CCCcccchHHHhhh
Q psy5279         338 --LNPLEYDVRYVRQA  351 (1310)
Q Consensus       338 --l~~~~~t~~yv~~~  351 (1310)
                        ....+||+.|+++.
T Consensus       198 ~~~~~~~gt~~y~aPE  213 (371)
T cd05622         198 VRCDTAVGTPDYISPE  213 (371)
T ss_pred             ccccCcccCccccCHH
Confidence              23456777776653

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=2.6e-27  Score=268.30  Aligned_cols=160  Identities=26%  Similarity=0.440  Sum_probs=136.4

Q ss_pred             ceecccCceEEEEEEEc---CCCcEEEEEEEecCC----cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         189 DELGRGVTGIVYHAVER---SSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k---~Tg~~vAIKiI~~~~----~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.||+|+||.||+|.+.   .+++.||+|++....    ......+.+|+.+|+.++||||++++++|..++.+|+||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            67999999999999864   578999999997531    12334567899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CCCC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KLNP  340 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l~~  340 (1310)
                      ++||+|.+.+.+.+.+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.....+ ....
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~  159 (323)
T cd05584          82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG--HVKLTDFGLCKESIHEGTVTHT  159 (323)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEeeCcCCeecccCCCcccc
Confidence            99999999998888899999999999999999999999999999999999998655  79999999998643322 3334


Q ss_pred             cccchHHHhh
Q psy5279         341 LEYDVRYVRQ  350 (1310)
Q Consensus       341 ~~~t~~yv~~  350 (1310)
                      .++|+.|+++
T Consensus       160 ~~gt~~y~aP  169 (323)
T cd05584         160 FCGTIEYMAP  169 (323)
T ss_pred             cCCCccccCh
Confidence            5667666554

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.94  E-value=2.2e-27  Score=256.24  Aligned_cols=102  Identities=22%  Similarity=0.410  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++||+||||||+||+++.  ...++|+|||++........ ......+++.|+|||++.+..++.
T Consensus       105 ~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~--~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  181 (257)
T cd08223         105 VEWFVQIAMALQYLHEKHILHRDLKTQNVFLTR--TNIIKVGDLGIARVLENQCD-MASTLIGTPYYMSPELFSNKPYNY  181 (257)
T ss_pred             HHHHHHHHHHHHHHHhCCeeccCCCchhEEEec--CCcEEEecccceEEecccCC-ccccccCCcCccChhHhcCCCCCc
Confidence            345679999999999999999999999999975  45799999999876533221 122335678999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|+|||||++|+|++|..||.+.+
T Consensus       182 ~~Dv~slG~il~~l~~g~~~~~~~~  206 (257)
T cd08223         182 KSDVWALGCCVYEMATLKHAFNAKD  206 (257)
T ss_pred             hhhhHHHHHHHHHHHcCCCCCCCCC
Confidence            9999999999999999999997543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.94  E-value=7.8e-28  Score=264.55  Aligned_cols=96  Identities=21%  Similarity=0.351  Sum_probs=79.1

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhh-chhhHHHHHHhcCCCC--ccc
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSL-RHERIASLLEAYKPST--TAS  669 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~  669 (1310)
                      +|...|++...|..|.||.|.+|..+ +++..+|.|+++.......+...|...++.+ +|++|..+++.+....  ...
T Consensus        13 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   91 (282)
T cd06636          13 DPAGIFELVEVVGNGTYGQVYKGRHV-KTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHD   91 (282)
T ss_pred             ChhhhhhhheeeccCCCeEEEEEEEc-CCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCC
Confidence            46678999999999999999987665 4788999999999887777888899999998 6999999998875432  234


Q ss_pred             chhhHHHHhhcCchhhhhhh
Q psy5279         670 NIAVLVMEKLQGADVLSYLS  689 (1310)
Q Consensus       670 ~~~~~~~~~~~~~~~~~~~~  689 (1310)
                      +...+|||++.|.++..++.
T Consensus        92 ~~~~iv~e~~~~~~L~~~~~  111 (282)
T cd06636          92 DQLWLVMEFCGAGSVTDLVK  111 (282)
T ss_pred             CEEEEEEEeCCCCcHHHHHH
Confidence            67789999999988766553

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.94  E-value=1.5e-27  Score=262.12  Aligned_cols=99  Identities=29%  Similarity=0.460  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++|++|+||+|+||+++.  +..+||+|||++........ ......++..|+|||.+.+..++.+
T Consensus       105 ~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~  181 (277)
T cd06642         105 TILREILKGLDYLHSERKIHRDIKAANVLLSE--QGDVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIKQSAYDFK  181 (277)
T ss_pred             HHHHHHHHHHHHHhcCCeeccCCChheEEEeC--CCCEEEccccccccccCcch-hhhcccCcccccCHHHhCcCCCchh
Confidence            34569999999999999999999999999975  45699999999876543211 1122345688999999999889999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      +|+|||||++|+|++|..||..
T Consensus       182 ~Dv~slG~il~el~tg~~p~~~  203 (277)
T cd06642         182 ADIWSLGITAIELAKGEPPNSD  203 (277)
T ss_pred             hhHHHHHHHHHHHHhCCCCCcc
Confidence            9999999999999999999854

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.2e-26  Score=264.05  Aligned_cols=164  Identities=23%  Similarity=0.436  Sum_probs=140.4

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|++.+.||+|+||.||+|.++.+++.||+|++.+..   ......+.+|+.+++.++||||++++++|.+++.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            46899999999999999999999999999999997421   223445788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      ||++||+|.+.+.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+...+..
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~  158 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNG--HIRLADFGSCLRLLADGTV  158 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCC--CEEEEECCceeecCCCCCc
Confidence            99999999999876 35699999999999999999999999999999999999997655  7999999999876543322


Q ss_pred             C--CcccchHHH
Q psy5279         339 N--PLEYDVRYV  348 (1310)
Q Consensus       339 ~--~~~~t~~yv  348 (1310)
                      .  ..++|+.|+
T Consensus       159 ~~~~~~gt~~y~  170 (331)
T cd05597         159 QSNVAVGTPDYI  170 (331)
T ss_pred             cccceecccccc
Confidence            1  234555544

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.94  E-value=4.5e-27  Score=267.52  Aligned_cols=165  Identities=21%  Similarity=0.387  Sum_probs=141.3

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|++.+.||+|+||.||++.++.+++.||+|++.+..   ......+.+|+.++..++||||+++++++.+++.+||||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            47899999999999999999999999999999986532   123345778999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      ||++||+|.+.+.. ...+++..++.++.|++.||+|||++||+||||||+|||++.++  .+||+|||+|+.+......
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~--~~kl~DfG~a~~~~~~~~~  158 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG--HIRLADFGSCLKMNQDGTV  158 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCC--CEEEEeccceeeccCCCce
Confidence            99999999999976 45699999999999999999999999999999999999998655  7999999999877544322


Q ss_pred             --CCcccchHHHh
Q psy5279         339 --NPLEYDVRYVR  349 (1310)
Q Consensus       339 --~~~~~t~~yv~  349 (1310)
                        ...+||+.|++
T Consensus       159 ~~~~~~gt~~y~a  171 (331)
T cd05624         159 QSSVAVGTPDYIS  171 (331)
T ss_pred             eeccccCCcccCC
Confidence              22345555543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.94  E-value=4.8e-27  Score=265.85  Aligned_cols=160  Identities=29%  Similarity=0.479  Sum_probs=134.7

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHH-HHHhcCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELD-IMNQLCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~-IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.++.+|+.||+|++.+...   .....+.+|.. +++.++|||||++++++...+.+|+||||++|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            469999999999999999999999999975321   22233445554 56889999999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.... .......++
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGLCKEGIEHSKTTSTFCG  158 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeccCCCcccccCCCccccccC
Confidence            99999998877899999999999999999999999999999999999998655  799999999986432 223345567


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (323)
T cd05575         159 TPEYLAP  165 (323)
T ss_pred             ChhhcCh
Confidence            7777654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.94  E-value=8.9e-28  Score=261.64  Aligned_cols=100  Identities=30%  Similarity=0.464  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc---CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA---EEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~---~~~ 1025 (1310)
                      ..++.|++.||+|||++||+||||||+||+++.  +..+||+|||++........ ......+++.|+|||.+.   ...
T Consensus       109 ~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~  185 (267)
T cd06646         109 AYVCRETLQGLAYLHSKGKMHRDIKGANILLTD--NGDVKLADFGVAAKITATIA-KRKSFIGTPYWMAPEVAAVEKNGG  185 (267)
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCCEEECcCccceeeccccc-ccCccccCccccCHhHcccccCCC
Confidence            345679999999999999999999999999975  45699999999876532211 112234678999999985   345


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ++.++|+||+||++|+|++|..||..
T Consensus       186 ~~~~~Dvws~G~il~el~~g~~p~~~  211 (267)
T cd06646         186 YNQLCDIWAVGITAIELAELQPPMFD  211 (267)
T ss_pred             CcchhhHHHHHHHHHHHHhCCCCccc
Confidence            77899999999999999999999854

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.94  E-value=1.6e-27  Score=265.44  Aligned_cols=108  Identities=22%  Similarity=0.299  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec--CCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV--RSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAE 1023 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~--~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~ 1023 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.+  ..+.+||+|||++........  .......+++.|+|||++.+
T Consensus       110 ~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  189 (316)
T cd07842         110 VKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLG  189 (316)
T ss_pred             HHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhC
Confidence            34567899999999999999999999999999752  146799999999875432221  11112245688999998876


Q ss_pred             C-CCCCccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1024 E-PIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1024 ~-~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      . .++.++|+|||||++|+|++|.+||.+....
T Consensus       190 ~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~  222 (316)
T cd07842         190 ARHYTKAIDIWAIGCIFAELLTLEPIFKGREAK  222 (316)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhcCCCCcCCccc
Confidence            4 5788999999999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG1290|consensus

Probab=99.94  E-value=9.6e-26  Score=260.31  Aligned_cols=134  Identities=25%  Similarity=0.423  Sum_probs=116.1

Q ss_pred             ccC-CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC-----CC---CcceEEEEEE
Q psy5279         180 PIT-DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-----HR---NLVRLHDSYE  250 (1310)
Q Consensus       180 ~~~-d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~-----HP---NIVkL~d~f~  250 (1310)
                      .|. .+|.+.++||=|.|++||+|.+..+.+-||+|+++.. ....+....||.+|+++.     |+   .||+|++.|.
T Consensus        74 ~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fk  152 (590)
T KOG1290|consen   74 VFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFK  152 (590)
T ss_pred             cccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccce
Confidence            577 8999999999999999999999999999999998633 356677789999999983     44   4999999998


Q ss_pred             eC----CeEEEEEecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeec
Q psy5279         251 TK----DSFTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAH  315 (1310)
Q Consensus       251 ~~----~~lyLVmEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~  315 (1310)
                      ..    ..++||+|++. ..|+..|....  .++-..++.|++|||.||+|||. .||||-||||||||+..
T Consensus       153 hsGpNG~HVCMVfEvLG-dnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~  223 (590)
T KOG1290|consen  153 HSGPNGQHVCMVFEVLG-DNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCS  223 (590)
T ss_pred             ecCCCCcEEEEEehhhh-hHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeec
Confidence            65    47999999984 57888887653  48999999999999999999995 69999999999999964

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.94  E-value=9.6e-28  Score=265.81  Aligned_cols=104  Identities=22%  Similarity=0.371  Sum_probs=82.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys~ 1028 (1310)
                      .++.||+.||+|||++||+||||||+||+++.. ...+||+|||++........ ......+++.|+|||++.+. .++.
T Consensus       106 ~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~-~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~  183 (294)
T PLN00009        106 TYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRR-TNALKLADFGLARAFGIPVR-TFTHEVVTLWYRAPEILLGSRHYST  183 (294)
T ss_pred             HHHHHHHHHHHHHHhCCeeCCCCCcceEEEECC-CCEEEEcccccccccCCCcc-ccccCceeecccCHHHHhCCCCCCc
Confidence            456799999999999999999999999999742 34689999999865432111 11122346889999998764 5788


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      ++|+||+||++|+|++|.+||.+.+..
T Consensus       184 ~~Dv~slG~i~~~l~tg~~pf~~~~~~  210 (294)
T PLN00009        184 PVDIWSVGCIFAEMVNQKPLFPGDSEI  210 (294)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            999999999999999999999876543

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.94  E-value=7.8e-28  Score=260.19  Aligned_cols=102  Identities=30%  Similarity=0.523  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc---cccCCCCCCcccccccccCC-
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---IHPINTPNPEFAAPEVLAEE- 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~---~~~~~tGtp~Y~APEvl~~~- 1024 (1310)
                      ..++.|++.||.|||++||+||||||+||+++.  +..+||+|||++.........   ......+++.|+|||++... 
T Consensus       105 ~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~--~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~  182 (267)
T cd06610         105 ATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGE--DGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVH  182 (267)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC--CCCEEEcccchHHHhccCccccccccccccCChhhcChHHHcccc
Confidence            345679999999999999999999999999986  456999999988655432211   11223467889999999877 


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++.++|+|||||++|+|++|..||...
T Consensus       183 ~~~~~~Dv~slG~i~~~l~~g~~p~~~~  210 (267)
T cd06610         183 GYDFKADIWSFGITAIELATGAAPYSKY  210 (267)
T ss_pred             CcCcccchHhHhHHHHHHHhCCCCcccc
Confidence            7889999999999999999999999654

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.94  E-value=3.2e-27  Score=267.03  Aligned_cols=160  Identities=24%  Similarity=0.337  Sum_probs=137.0

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||.||+|.++.+|+.||+|++.+..   ......+..|+.+|..+ +||||++++++|.+++.+||||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            46999999999999999999999999997532   22344567899999876 899999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l~~~~~  343 (1310)
                      |+|...+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++..... ......++
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG--HCKLADFGMCKEGILNGVTTTTFCG  158 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEEeecccceecccCCcccccccc
Confidence            99999998877899999999999999999999999999999999999998665  7999999999865332 23344566


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (321)
T cd05591         159 TPDYIAP  165 (321)
T ss_pred             CccccCH
Confidence            7766654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=3.5e-27  Score=266.01  Aligned_cols=161  Identities=30%  Similarity=0.505  Sum_probs=138.6

Q ss_pred             ceecccCceEEEEEEE---cCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCC
Q psy5279         189 DELGRGVTGIVYHAVE---RSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAG  263 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~---k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~  263 (1310)
                      +.||+|+||.||++.+   +.+|+.||+|++.....  .....+.+|+.+|++++||||++++++|.+++.+|+||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999876   46899999999975322  233456789999999999999999999999999999999999


Q ss_pred             CCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCCCCcc
Q psy5279         264 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKLNPLE  342 (1310)
Q Consensus       264 GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l~~~~  342 (1310)
                      ||+|.+.+.+...+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++..... ......+
T Consensus        82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~~~~~~  159 (318)
T cd05582          82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKLTDFGLSKESIDHEKKAYSFC  159 (318)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC--cEEEeeccCCcccCCCCCceeccc
Confidence            999999998777899999999999999999999999999999999999998655  7999999999876543 2334567


Q ss_pred             cchHHHhhh
Q psy5279         343 YDVRYVRQA  351 (1310)
Q Consensus       343 ~t~~yv~~~  351 (1310)
                      +|+.|+++.
T Consensus       160 g~~~y~aPE  168 (318)
T cd05582         160 GTVEYMAPE  168 (318)
T ss_pred             CChhhcCHH
Confidence            777776653

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.2e-27  Score=257.06  Aligned_cols=101  Identities=28%  Similarity=0.448  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccc--cCCCCCCcccccccccCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH--PINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~--~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .++.|++.||.|||+.||+||||||+||+++.  +..+||+|||+++..........  ....+++.|+|||++.+..++
T Consensus       108 ~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  185 (263)
T cd06625         108 KYTRQILEGVEYLHSNMIVHRDIKGANILRDS--AGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYG  185 (263)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCC
Confidence            34679999999999999999999999999975  45699999999875432211111  123456889999999999899


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|+|||||++|+|++|..||...
T Consensus       186 ~~~Di~slG~il~el~~g~~p~~~~  210 (263)
T cd06625         186 RKADVWSVGCTVVEMLTEKPPWAEF  210 (263)
T ss_pred             chhhhHHHHHHHHHHHhCCCCcccc
Confidence            9999999999999999999999653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.94  E-value=1.4e-27  Score=258.91  Aligned_cols=98  Identities=27%  Similarity=0.470  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.|++.||.|||+ .|++|+||||+||+++.  .+.+||+|||.+........   ....+++.|+|||.+.+..++.
T Consensus       104 ~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~--~~~~~l~d~g~~~~~~~~~~---~~~~~~~~y~~PE~~~~~~~~~  178 (265)
T cd06605         104 KIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS--RGQIKLCDFGVSGQLVNSLA---KTFVGTSSYMAPERIQGNDYSV  178 (265)
T ss_pred             HHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC--CCCEEEeecccchhhHHHHh---hcccCChhccCHHHHcCCCCCc
Confidence            346799999999999 99999999999999986  45699999998765432111   1145668899999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|+|||||++|+|++|..||...
T Consensus       179 ~~Dv~slG~~l~~l~~g~~p~~~~  202 (265)
T cd06605         179 KSDIWSLGLSLIELATGRFPYPPE  202 (265)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCcc
Confidence            999999999999999999999654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2e-27  Score=260.33  Aligned_cols=101  Identities=31%  Similarity=0.496  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++|++||||+|+||+++.  ++.++|+|||++....... .......+++.|+|||.+.+..++.
T Consensus       101 ~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~  177 (274)
T cd06609         101 AFILREVLLGLEYLHEEGKIHRDIKAANILLSE--EGDVKLADFGVSGQLTSTM-SKRNTFVGTPFWMAPEVIKQSGYDE  177 (274)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEEcccccceeecccc-cccccccCCccccChhhhccCCCCc
Confidence            345679999999999999999999999999986  4569999999987664321 1122335668899999999988999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|+|||||++|+|++|..||.+.
T Consensus       178 ~sDv~slG~il~~l~tg~~p~~~~  201 (274)
T cd06609         178 KADIWSLGITAIELAKGEPPLSDL  201 (274)
T ss_pred             hhhHHHHHHHHHHHHhCCCCcccC
Confidence            999999999999999999999654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.94  E-value=3.2e-27  Score=259.34  Aligned_cols=104  Identities=26%  Similarity=0.497  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys~ 1028 (1310)
                      .++.||+.||.|||++||+|+||+|+||+++.  +..+||+|||++......... .....+++.|+|||++.+. .++.
T Consensus       104 ~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~--~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~  180 (286)
T cd07846         104 KYLFQILRGIEFCHSHNIIHRDIKPENILVSQ--SGVVKLCDFGFARTLAAPGEV-YTDYVATRWYRAPELLVGDTKYGR  180 (286)
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCcEEEEeeeeeeeccCCccc-cCcccceeeccCcHHhccccccCc
Confidence            45679999999999999999999999999975  457999999998765432221 1223456889999998764 4678


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++|||||||++|+|++|.+||.+.+..+
T Consensus       181 ~~Dv~slG~~l~el~~g~~~~~~~~~~~  208 (286)
T cd07846         181 AVDIWAVGCLVTEMLTGEPLFPGDSDID  208 (286)
T ss_pred             hHhHHHHHHHHHHHHcCCCCCCCCchHH
Confidence            8999999999999999999998765433

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.94  E-value=2e-27  Score=260.00  Aligned_cols=104  Identities=24%  Similarity=0.421  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.   ..+||+|||+++........  ....+++.|+|||.+.. ..++
T Consensus       103 ~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~---~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~  177 (282)
T cd07831         103 KSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD---DILKLADFGSCRGIYSKPPY--TEYISTRWYRAPECLLTDGYYG  177 (282)
T ss_pred             HHHHHHHHHHHHHHHHCCceecccCHHHEEEcC---CCeEEEecccccccccCCCc--CCCCCCcccCChhHhhcCCCCC
Confidence            345679999999999999999999999999986   67999999998765432221  12345689999998754 4567


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++|+||+||++|+|++|.+||.+.+..+.
T Consensus       178 ~~~Di~slGv~l~el~~~~~p~~~~~~~~~  207 (282)
T cd07831         178 PKMDIWAVGCVFFEILSLFPLFPGTNELDQ  207 (282)
T ss_pred             cchhHHHHHHHHHHHHcCCcCCCCCCHHHH
Confidence            899999999999999999999988765443

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.94  E-value=6.1e-27  Score=264.94  Aligned_cols=165  Identities=20%  Similarity=0.312  Sum_probs=141.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .|.+.+.||+|+||.||+|.++.+++.||||++.+...   .....+..|..++..+ +||+|+++++++.+.+.+|+||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            47889999999999999999999999999999975421   2233456788888877 5899999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l  338 (1310)
                      ||++||+|...+...+.+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++..... ...
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kL~DfG~~~~~~~~~~~~  158 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--HIKIADFGMCKENMWDGVTT  158 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC--cEEEccCCCceecCCCCCcc
Confidence            9999999999998877899999999999999999999999999999999999998765  7999999999865432 233


Q ss_pred             CCcccchHHHhh
Q psy5279         339 NPLEYDVRYVRQ  350 (1310)
Q Consensus       339 ~~~~~t~~yv~~  350 (1310)
                      ...+||+.|+++
T Consensus       159 ~~~~gt~~y~aP  170 (323)
T cd05616         159 KTFCGTPDYIAP  170 (323)
T ss_pred             ccCCCChhhcCH
Confidence            456777777664

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.94  E-value=6.2e-27  Score=265.15  Aligned_cols=161  Identities=27%  Similarity=0.472  Sum_probs=135.6

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHH-HHHhcCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELD-IMNQLCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~-IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.++.+|+.||+|++.+..   ......+.+|.. +++.++||||++++++|...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            46999999999999999999999999997542   122334455654 57789999999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.... .......++
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~--~~kL~DfG~~~~~~~~~~~~~~~~g  158 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG--HVVLTDFGLCKEGIAQSDTTTTFCG  158 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEeecCCcccCCCCCCCcccccC
Confidence            99999988878899999999999999999999999999999999999998765  799999999986432 223345567


Q ss_pred             chHHHhhh
Q psy5279         344 DVRYVRQA  351 (1310)
Q Consensus       344 t~~yv~~~  351 (1310)
                      |+.|+++.
T Consensus       159 t~~y~aPE  166 (325)
T cd05604         159 TPEYLAPE  166 (325)
T ss_pred             ChhhCCHH
Confidence            77776643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.94  E-value=1.4e-27  Score=264.78  Aligned_cols=99  Identities=27%  Similarity=0.520  Sum_probs=84.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+|+||+|.|||++.  ++.+||+|||++......    .....+++.|+|||.+.+..++.
T Consensus       104 ~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~--~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~  177 (290)
T cd05580         104 RFYAAQVVLALEYLHSLDIVYRDLKPENLLLDS--DGYIKITDFGFAKRVKGR----TYTLCGTPEYLAPEIILSKGYGK  177 (290)
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC--CCCEEEeeCCCccccCCC----CCCCCCCccccChhhhcCCCCCc
Confidence            345679999999999999999999999999975  456999999998765432    12235678999999998888889


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|+|||||++|+|++|..||...+
T Consensus       178 ~~Di~slG~il~~l~~g~~p~~~~~  202 (290)
T cd05580         178 AVDWWALGILIYEMLAGYPPFFDDN  202 (290)
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999997654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.94  E-value=7e-27  Score=267.93  Aligned_cols=161  Identities=29%  Similarity=0.526  Sum_probs=135.0

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|++.+.||+|+||.||+|.+..+|+.||||++.... ......+.+|+.+|+.++|||||+++++|...+.+|+||||
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            55778899999999999999999999999999986543 23456688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CCCC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KLNP  340 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l~~  340 (1310)
                      |.+|+|...    ....+..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.+.... ....
T Consensus       154 ~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--~~kL~DfG~~~~~~~~~~~~~~  227 (353)
T PLN00034        154 MDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK--NVKIADFGVSRILAQTMDPCNS  227 (353)
T ss_pred             CCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEEcccccceecccccccccc
Confidence            999998643    2356788889999999999999999999999999999998655  79999999998764322 1223


Q ss_pred             cccchHHHh
Q psy5279         341 LEYDVRYVR  349 (1310)
Q Consensus       341 ~~~t~~yv~  349 (1310)
                      ..||..|++
T Consensus       228 ~~gt~~y~a  236 (353)
T PLN00034        228 SVGTIAYMS  236 (353)
T ss_pred             cccCccccC
Confidence            344544443

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=1.4e-26  Score=271.11  Aligned_cols=143  Identities=17%  Similarity=0.326  Sum_probs=130.3

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ....|++.+.||+|+||.||+|.+..+++.||+|...      ...+.+|+.+|+.|+|||||+++++|......++|||
T Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e  163 (391)
T PHA03212         90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP  163 (391)
T ss_pred             ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence            3467999999999999999999999999999999753      2346789999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ++. ++|...+.....+++.+++.++.||+.||.|||++|||||||||+|||++.++  .+||+|||+|+..
T Consensus       164 ~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~--~vkL~DFG~a~~~  232 (391)
T PHA03212        164 RYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG--DVCLGDFGAACFP  232 (391)
T ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCC--CEEEEeCCccccc
Confidence            996 68888887777899999999999999999999999999999999999998655  7999999999754

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.94  E-value=1.4e-27  Score=261.93  Aligned_cols=105  Identities=25%  Similarity=0.405  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.  +..+||+|||++...............+++.|+|||++.+. .++
T Consensus       103 ~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~--~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~  180 (288)
T cd07833         103 RSYIWQLLQAIAYCHSHNIIHRDIKPENILVSE--SGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYG  180 (288)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcC
Confidence            345679999999999999999999999999985  56799999999876543332122223456889999999888 788


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      .++|+|||||++|+|++|.+||.+.+..
T Consensus       181 ~~~Dv~slG~~l~~l~~g~~~~~~~~~~  208 (288)
T cd07833         181 KPVDVWAIGCIMAELLDGEPLFPGDSDI  208 (288)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999999999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.94  E-value=1.3e-26  Score=263.72  Aligned_cols=160  Identities=24%  Similarity=0.367  Sum_probs=136.2

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.++.+++.||+|++.+..   ......+.+|+.++.++ +|||||+++++|...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            46999999999999999999999999997542   22344577899998877 899999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.... .......+|
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~--~~kL~DfG~~~~~~~~~~~~~~~~g  158 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGDTTSTFCG  158 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--CEEEeeCCccccccCCCCccccccC
Confidence            99999888777899999999999999999999999999999999999998665  799999999986432 222334556


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (329)
T cd05618         159 TPNYIAP  165 (329)
T ss_pred             CccccCH
Confidence            6655543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG1035|consensus

Probab=99.94  E-value=2.1e-26  Score=286.16  Aligned_cols=102  Identities=24%  Similarity=0.438  Sum_probs=81.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeec----------c-------CCccccc
Q psy5279         945 THKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT----------K-------LGTLIHP 1007 (1310)
Q Consensus       945 ~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~----------~-------~g~~~~~ 1007 (1310)
                      ....-.+|+||++||.|+|++|||||||||.||++++  ...|||+|||+|....          .       .+....+
T Consensus       696 ~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~--~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~T  773 (1351)
T KOG1035|consen  696 RDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDS--RNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLT  773 (1351)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcC--CCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccc
Confidence            3445568999999999999999999999999999996  4569999999987521          0       0111223


Q ss_pred             CCCCCCcccccccccCCC---CCCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1008 INTPNPEFAAPEVLAEEP---IFPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1008 ~~tGtp~Y~APEvl~~~~---ys~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ...||.-|+|||++.+..   |+.|+|+|||||++|||+.   ||..
T Consensus       774 s~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~T  817 (1351)
T KOG1035|consen  774 SQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGT  817 (1351)
T ss_pred             cccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCc
Confidence            446788999999998765   9999999999999999984   5643

>KOG0690|consensus

Probab=99.94  E-value=2.5e-27  Score=261.98  Aligned_cols=232  Identities=20%  Similarity=0.348  Sum_probs=183.2

Q ss_pred             ccccchhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcc
Q psy5279         857 GAADTYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTST  934 (1310)
Q Consensus       857 ~~~~~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l  934 (1310)
                      +....||||+||+|  +...-++|.--|+.+.+.+  .+||+......++-..-..|+|++..             |+.+
T Consensus       191 at~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~--~HPFLt~LKYsFQt~drlCFVMeyan-------------GGeL  255 (516)
T KOG0690|consen  191 ATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC--RHPFLTSLKYSFQTQDRLCFVMEYAN-------------GGEL  255 (516)
T ss_pred             ccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc--cCcHHHHhhhhhccCceEEEEEEEcc-------------CceE
Confidence            45678999999998  3555555655566555543  37899888877775555556665544             4444


Q ss_pred             cccccc-cCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCC
Q psy5279         935 LCYLPI-VIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013 (1310)
Q Consensus       935 ~~~L~~-~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp 1013 (1310)
                      ..-|.+ .+.++...+++-..|++||.|||+++||.||||.+|+|++.  ++++||+|||+++..-..|. .+..++|||
T Consensus       256 f~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDk--DGHIKitDFGLCKE~I~~g~-t~kTFCGTP  332 (516)
T KOG0690|consen  256 FFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDK--DGHIKITDFGLCKEEIKYGD-TTKTFCGTP  332 (516)
T ss_pred             eeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheecc--CCceEeeecccchhcccccc-eeccccCCh
Confidence            444433 35567778999999999999999999999999999999985  67899999999976433333 234567889


Q ss_pred             cccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCC-cc
Q psy5279        1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHE-VD 1092 (1310)
Q Consensus      1014 ~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~-~~ 1092 (1310)
                      .|.|||++....|+.++|||.+||++|||++|++||...+...+...|.....+||.   .+|++|+.||..+|+.+ .+
T Consensus       333 EYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr---~ls~eAktLLsGLL~kdP~k  409 (516)
T KOG0690|consen  333 EYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR---TLSPEAKTLLSGLLKKDPKK  409 (516)
T ss_pred             hhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc---cCCHHHHHHHHHHhhcChHh
Confidence            999999999999999999999999999999999999999999999999999999985   78999999999888654 44


Q ss_pred             hh-----cHHhhhCCCcccccc
Q psy5279        1093 WI-----TLANNIDHEFWHVKD 1109 (1310)
Q Consensus      1093 ri-----t~~e~L~H~f~~~~~ 1109 (1310)
                      |.     .+.++..|+||...+
T Consensus       410 RLGgGpdDakEi~~h~FF~~v~  431 (516)
T KOG0690|consen  410 RLGGGPDDAKEIMRHRFFASVD  431 (516)
T ss_pred             hcCCCchhHHHHHhhhhhccCC
Confidence            54     346778898887544

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.94  E-value=7.4e-28  Score=267.46  Aligned_cols=100  Identities=25%  Similarity=0.482  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++||+||||||+|||++.  ...++|+|||++.........  ....|++.|+|||++.+..++.
T Consensus       105 ~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~  180 (285)
T cd05630         105 VFYAAEICCGLEDLHQERIVYRDLKPENILLDD--HGHIRISDLGLAVHVPEGQTI--KGRVGTVGYMAPEVVKNERYTF  180 (285)
T ss_pred             HHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC--CCCEEEeeccceeecCCCccc--cCCCCCccccChHHHcCCCCCC
Confidence            445679999999999999999999999999985  456999999998654322221  1234678999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|+||+||++|+|++|..||.+.
T Consensus       181 ~~DiwslG~~l~~l~~g~~Pf~~~  204 (285)
T cd05630         181 SPDWWALGCLLYEMIAGQSPFQQR  204 (285)
T ss_pred             ccccHHHHHHHHHHHhCCCCCCCC
Confidence            999999999999999999999653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.94  E-value=1.1e-26  Score=275.84  Aligned_cols=162  Identities=25%  Similarity=0.347  Sum_probs=130.4

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--------
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--------  252 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--------  252 (1310)
                      ....|++.+.||+|+||.||+|.+..+++.||||++....    ....+|+.+|+.++|||||+++++|...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            3467999999999999999999999999999999885432    2345799999999999999999987543        


Q ss_pred             CeEEEEEecCCCCchHHHhh----hcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecc
Q psy5279         253 DSFTIISELAGGGELLHSLT----RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL  328 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~----~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGL  328 (1310)
                      ..+++||||++++ |.+.+.    ....+++..++.++.||+.||+|||++||+||||||+|||++.++ ..+||+|||+
T Consensus       140 ~~l~lvmE~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~-~~vkL~DFGl  217 (440)
T PTZ00036        140 IFLNVVMEFIPQT-VHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNT-HTLKLCDFGS  217 (440)
T ss_pred             eEEEEEEecCCcc-HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCC-Cceeeecccc
Confidence            2578999999864 544432    345699999999999999999999999999999999999997543 3699999999


Q ss_pred             ceeecCCCCCCCcccchHHH
Q psy5279         329 SRRITSFGKLNPLEYDVRYV  348 (1310)
Q Consensus       329 Ar~i~~~~~l~~~~~t~~yv  348 (1310)
                      |+.+.........++|+.|+
T Consensus       218 a~~~~~~~~~~~~~~t~~y~  237 (440)
T PTZ00036        218 AKNLLAGQRSVSYICSRFYR  237 (440)
T ss_pred             chhccCCCCcccCCCCcCcc
Confidence            99775543333334444443

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.94  E-value=2.1e-26  Score=261.80  Aligned_cols=150  Identities=24%  Similarity=0.376  Sum_probs=136.7

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .++|++.+.||+|+||.||+|.+..+|..||+|++.... ......+.+|+.+|++++||||+++++++...+.+++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            478999999999999999999999999999999987542 2345678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL-SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~-gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |++||+|.+.+.....+++..+..++.|++.||.|||++ +|+||||||+|||++.++  .+||+|||+++.+.
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~  155 (331)
T cd06649          84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLI  155 (331)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC--cEEEccCccccccc
Confidence            999999999998777899999999999999999999986 699999999999998665  79999999998664

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.94  E-value=5.2e-27  Score=265.73  Aligned_cols=161  Identities=29%  Similarity=0.471  Sum_probs=134.6

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHH-HHHHhcCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNEL-DIMNQLCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI-~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.++.+++.||+|++.+..   ......+.+|. .+++.++||||++++++|...+.+|+||||++|
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            46999999999999999999999999997532   11222334444 457889999999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|.+.+.....+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.... .......++
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~--~~kl~DfG~a~~~~~~~~~~~~~~g  158 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG--HIVLTDFGLCKENIEHNGTTSTFCG  158 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEEccCCCCcccccCCCCcccccC
Confidence            99999998877899999999999999999999999999999999999998655  799999999986432 333445667


Q ss_pred             chHHHhhh
Q psy5279         344 DVRYVRQA  351 (1310)
Q Consensus       344 t~~yv~~~  351 (1310)
                      |+.|+++.
T Consensus       159 t~~y~aPE  166 (325)
T cd05602         159 TPEYLAPE  166 (325)
T ss_pred             CccccCHH
Confidence            77776643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.94  E-value=4e-27  Score=257.28  Aligned_cols=105  Identities=26%  Similarity=0.414  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+|+||||+||+++.  +..+||+|||++......... .....++..|+|||.+.+. .++
T Consensus       101 ~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~  177 (283)
T cd05118         101 KSYLYQLLQGLAFCHSHGILHRDLKPENLLINT--EGVLKLADFGLARSFGSPVRP-YTHYVVTRWYRAPELLLGDKGYS  177 (283)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCcCHHHEEECC--CCcEEEeeeeeeEecCCCccc-ccCccCcccccCcHHHhcCCCCC
Confidence            445779999999999999999999999999985  456999999998765433211 1123456789999999877 788


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++|+||+||++|+|++|+.||.+.+..+
T Consensus       178 ~~~Di~slG~~l~~l~tg~~~~~~~~~~~  206 (283)
T cd05118         178 TPVDIWSVGCIFAELLSRRPLFPGKSEID  206 (283)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            89999999999999999999998776543

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.94  E-value=1.9e-27  Score=269.40  Aligned_cols=106  Identities=25%  Similarity=0.373  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC-------------cccccCCCCCCcc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-------------TLIHPINTPNPEF 1015 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g-------------~~~~~~~tGtp~Y 1015 (1310)
                      ..++.||+.||+|||++||+|+||||+|||++.  ...+||+|||++......+             ........+++.|
T Consensus       122 ~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y  199 (335)
T PTZ00024        122 KCILLQILNGLNVLHKWYFMHRDLSPANIFINS--KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWY  199 (335)
T ss_pred             HHHHHHHHHHHHHHHhCCeecccccHHHeEECC--CCCEEECCccceeecccccccccccccccccccccccccccccCC
Confidence            345679999999999999999999999999975  4569999999886543110             1111122356789


Q ss_pred             cccccccCC-CCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1016 AAPEVLAEE-PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1016 ~APEvl~~~-~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      +|||.+.+. .++.++|+|||||++|+|++|.+||.+.+..+
T Consensus       200 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~  241 (335)
T PTZ00024        200 RAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID  241 (335)
T ss_pred             CCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            999998764 46889999999999999999999998876543

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.94  E-value=2.7e-27  Score=270.15  Aligned_cols=108  Identities=23%  Similarity=0.400  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccC-C
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAE-E 1024 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~-~ 1024 (1310)
                      +..++.||++||.|||++||+||||||+||+++. .+..+||+|||++.........  ......+++.|+|||.+.+ .
T Consensus       116 ~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  194 (342)
T cd07854         116 ARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT-EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPN  194 (342)
T ss_pred             HHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC-CCceEEECCcccceecCCccccccccccccccccccCHHHHhCcc
Confidence            4556789999999999999999999999999974 2346899999998754321111  1112245678999998755 4


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++.++|+|||||++|+|++|..||.+.+..+
T Consensus       195 ~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~  226 (342)
T cd07854         195 NYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE  226 (342)
T ss_pred             ccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            67889999999999999999999998776543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.94  E-value=4.7e-27  Score=265.74  Aligned_cols=160  Identities=19%  Similarity=0.358  Sum_probs=134.6

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||.||+|.++.+|+.||+|++++..   .........|..+|..+ +||||++++++|.+.+.+|+||||+.|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            46999999999999999999999999997532   12334566788888764 899999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+.....+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++.... .......++
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG--HIKIADFGMCKENVFGDNRASTFCG  158 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEeCccCCCeecccCCCceeccCC
Confidence            99999998877899999999999999999999999999999999999998655  799999999985422 222334556


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (316)
T cd05620         159 TPDYIAP  165 (316)
T ss_pred             CcCccCH
Confidence            6655543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.94  E-value=4.4e-27  Score=258.29  Aligned_cols=104  Identities=22%  Similarity=0.360  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||+|||++|++||||+|+||+++.  +..+||+|||++......... .....+++.|+|||++.+. .++
T Consensus       102 ~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~--~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  178 (283)
T cd07835         102 KSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR--EGALKLADFGLARAFGVPVRT-YTHEVVTLWYRAPEILLGSRQYS  178 (283)
T ss_pred             HHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC--CCcEEEeecccccccCCCccc-cCccccccCCCCCceeecCcccC
Confidence            345679999999999999999999999999986  567999999998654322111 1122346889999988765 578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      .++|+|||||++|+|++|.+||.+.+..
T Consensus       179 ~~~Di~slG~~l~~l~~g~~pf~~~~~~  206 (283)
T cd07835         179 TPVDIWSIGCIFAEMVNRRPLFPGDSEI  206 (283)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            8999999999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.94  E-value=4.9e-27  Score=265.89  Aligned_cols=163  Identities=25%  Similarity=0.389  Sum_probs=136.5

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHH---HhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIM---NQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL---~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      |++.+.||+|+||.||+|.++.+|+.||||++.+..   ....+.+.+|+.++   +.++||||++++++|.+.+.+|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            678999999999999999999999999999997532   22334566676665   567899999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GK  337 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~  337 (1310)
                      |||++||+|...+.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++..... ..
T Consensus        81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~--~~kL~Dfg~~~~~~~~~~~  157 (324)
T cd05589          81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG--FVKIADFGLCKEGMGFGDR  157 (324)
T ss_pred             EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--cEEeCcccCCccCCCCCCc
Confidence            999999999887754 5699999999999999999999999999999999999998765  8999999999864332 22


Q ss_pred             CCCcccchHHHhh
Q psy5279         338 LNPLEYDVRYVRQ  350 (1310)
Q Consensus       338 l~~~~~t~~yv~~  350 (1310)
                      ....++++.|+++
T Consensus       158 ~~~~~g~~~y~aP  170 (324)
T cd05589         158 TSTFCGTPEFLAP  170 (324)
T ss_pred             ccccccCccccCH
Confidence            3345666666554

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0612|consensus

Probab=99.94  E-value=9e-29  Score=304.99  Aligned_cols=167  Identities=23%  Similarity=0.383  Sum_probs=150.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC---CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~---~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      -.++|+++++||+|+||.|..++++.|++.||+|++++-   +......|..|-.||..-+.+.||+|+.+|.++.++||
T Consensus        73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYl  152 (1317)
T KOG0612|consen   73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYL  152 (1317)
T ss_pred             CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEE
Confidence            347899999999999999999999999999999999862   22344568889999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      |||||+||+|...+.+.+.++|.-+++|+..|..||+-||+.|+|||||||+||||+..|  ||||+|||-+-++...|.
T Consensus       153 VMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~G--HikLADFGsClkm~~dG~  230 (1317)
T KOG0612|consen  153 VMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSG--HIKLADFGSCLKMDADGT  230 (1317)
T ss_pred             EEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccC--cEeeccchhHHhcCCCCc
Confidence            999999999999999988999999999999999999999999999999999999998776  999999999888776553


Q ss_pred             --CCCcccchHHHh
Q psy5279         338 --LNPLEYDVRYVR  349 (1310)
Q Consensus       338 --l~~~~~t~~yv~  349 (1310)
                        ...-+|||.|+.
T Consensus       231 V~s~~aVGTPDYIS  244 (1317)
T KOG0612|consen  231 VRSSVAVGTPDYIS  244 (1317)
T ss_pred             EEeccccCCCCccC
Confidence              345688999985

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.94  E-value=7.1e-27  Score=264.26  Aligned_cols=160  Identities=21%  Similarity=0.370  Sum_probs=134.3

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHh-cCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQ-LCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~-L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.+..+++.||+|+++...   ....+.+..|..++.. ++||||+++++++...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999999999999999997532   1233445567777765 4899999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l~~~~~  343 (1310)
                      |+|...+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+..... ......+|
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~--~~kL~Dfg~a~~~~~~~~~~~~~~g  158 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG--HIKIADFGMCKENMNGEGKASTFCG  158 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC--CEEEccCcCCeECCCCCCccccccC
Confidence            99999998777899999999999999999999999999999999999998655  7999999999865332 23344566


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (316)
T cd05592         159 TPDYIAP  165 (316)
T ss_pred             CccccCH
Confidence            6666553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.94  E-value=2.1e-27  Score=269.29  Aligned_cols=149  Identities=23%  Similarity=0.299  Sum_probs=112.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++........ ......+++.|+|||++.+..+
T Consensus       176 ~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  253 (338)
T cd05102         176 LICYSFQVARGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVY  253 (338)
T ss_pred             HHHHHHHHHHHHHHHHHCCEECCCCccceEEEcC--CCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCC
Confidence            4556789999999999999999999999999975  457999999998765322111 1112234578999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhH-HHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPE-TRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e-~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +.++|||||||++|+|++ |..||.+....+ ....+....  .......+++++.+++.+|+. ++.+|+++.+++
T Consensus       254 ~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~  328 (338)
T cd05102         254 TTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT--RMRAPENATPEIYRIMLACWQGDPKERPTFSALV  328 (338)
T ss_pred             CcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCC--CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            999999999999999997 999998865433 222222211  111234678899999999886 567899988765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0192|consensus

Probab=99.94  E-value=1.6e-26  Score=268.62  Aligned_cols=161  Identities=25%  Similarity=0.418  Sum_probs=138.1

Q ss_pred             eeeceecccCceEEEEEEEcCCCcE-EEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-eEEEEEec
Q psy5279         186 DFGDELGRGVTGIVYHAVERSSGRN-YAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-SFTIISEL  261 (1310)
Q Consensus       186 ~i~~~LG~GsFG~Vyka~~k~Tg~~-vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-~lyLVmEy  261 (1310)
                      .+.+.||+|+||+||+|..+  |+. ||||++.....  ...+.|.+|+.+|.+|+|||||++++++..+. .+.|||||
T Consensus        44 ~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy  121 (362)
T KOG0192|consen   44 PIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY  121 (362)
T ss_pred             hhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence            44566999999999999876  445 99999975432  22568999999999999999999999999988 79999999


Q ss_pred             CCCCchHHHhhh--cCCCCHHHHHHHHHHHHHHHHHhhhCC-eeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CC
Q psy5279         262 AGGGELLHSLTR--QSYYTEYDIAHYIRQLLSGLDYMHRLS-IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GK  337 (1310)
Q Consensus       262 ~~GGeL~~~l~~--~~~lsE~~i~~ii~QIl~GL~YLHs~g-IVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~  337 (1310)
                      |++|+|.+.+.+  ...++...+..++.||+.||.|||+++ ||||||||+|||++.+. .++||||||+|+..... ..
T Consensus       122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~-~~~KI~DFGlsr~~~~~~~~  200 (362)
T KOG0192|consen  122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG-KTLKIADFGLSREKVISKTS  200 (362)
T ss_pred             CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC-CEEEECCCccceeecccccc
Confidence            999999999977  567999999999999999999999999 99999999999998653 48999999999987654 34


Q ss_pred             CCCcccchHHHh
Q psy5279         338 LNPLEYDVRYVR  349 (1310)
Q Consensus       338 l~~~~~t~~yv~  349 (1310)
                      ++...||..|++
T Consensus       201 ~~~~~GT~~wMA  212 (362)
T KOG0192|consen  201 MTSVAGTYRWMA  212 (362)
T ss_pred             ccCCCCCccccC
Confidence            444677766765

>KOG0666|consensus

Probab=99.94  E-value=7.4e-28  Score=265.59  Aligned_cols=181  Identities=25%  Similarity=0.386  Sum_probs=151.0

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCc----EEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEe-CC
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGR----NYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYET-KD  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~----~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~-~~  253 (1310)
                      ..+.|+....||+|.||.||+|+.+.++-    .||||.++..+.  ......-||+.+++.|+|||||+|..+|.. +.
T Consensus        22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~  101 (438)
T KOG0666|consen   22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK  101 (438)
T ss_pred             HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence            34679999999999999999998766543    689999876532  333445689999999999999999999977 88


Q ss_pred             eEEEEEecCCCCchHHHhhh-----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC--CeEEEEee
Q psy5279         254 SFTIISELAGGGELLHSLTR-----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDF  326 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~-----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~--~~VKLsDF  326 (1310)
                      .++|++||.+. +|.+.+.-     ...++..-++.++.||+.|+.|||++-|+||||||.|||+..++.  +.|||+||
T Consensus       102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl  180 (438)
T KOG0666|consen  102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL  180 (438)
T ss_pred             eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence            99999999986 67777642     235889999999999999999999999999999999999987632  48999999


Q ss_pred             ccceeecCCCCCCCc-ccchHHHhhhcCCCccccCCCCC
Q psy5279         327 GLSRRITSFGKLNPL-EYDVRYVRQALRHPWLNFADRKP  364 (1310)
Q Consensus       327 GLAr~i~~~~~l~~~-~~t~~yv~~~~r~P~l~~~~~~~  364 (1310)
                      ||||.+.+  .++|+ ..++-.||.|||+|+++++.+..
T Consensus       181 GlaR~~~~--plkpl~s~d~VVVTiWYRAPELLLGa~hY  217 (438)
T KOG0666|consen  181 GLARLFNN--PLKPLASLDPVVVTIWYRAPELLLGARHY  217 (438)
T ss_pred             cHHHHhhc--cccccccCCceEEEEEecChHHhcccccc
Confidence            99998854  45665 55677799999999999995543

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.94  E-value=2.3e-27  Score=261.68  Aligned_cols=97  Identities=28%  Similarity=0.450  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||.|||++||+|+||||+|||++.  +..+||+|||++......   ......+++.|+|||++.+..++.+
T Consensus        99 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~--~~~~~l~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~  173 (279)
T cd06619          99 RIAVAVVKGLTYLWSLKILHRDVKPSNMLVNT--RGQVKLCDFGVSTQLVNS---IAKTYVGTNAYMAPERISGEQYGIH  173 (279)
T ss_pred             HHHHHHHHHHHHHHHCCEeeCCCCHHHEEECC--CCCEEEeeCCcceecccc---cccCCCCChhhcCceeecCCCCCCc
Confidence            45679999999999999999999999999986  567999999998754321   1122356789999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      +|+|||||++|+|++|..||..
T Consensus       174 ~DvwslG~~l~~l~~g~~pf~~  195 (279)
T cd06619         174 SDVWSLGISFMELALGRFPYPQ  195 (279)
T ss_pred             chHHHHHHHHHHHHhCCCCchh
Confidence            9999999999999999999964

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.94  E-value=1.2e-26  Score=262.84  Aligned_cols=159  Identities=20%  Similarity=0.339  Sum_probs=133.4

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHh-cCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQ-LCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~-L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.+..+++.||||+++...   .........|..+++. ++||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            46999999999999999999999999997532   1233445678888876 5999999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.... .......++
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDG--HIKIADFGMCKENMLGDAKTCTFCG  158 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEccCCcceECCCCCCceeeecC
Confidence            99999998777799999999999999999999999999999999999998655  799999999986432 122334455


Q ss_pred             chHHHh
Q psy5279         344 DVRYVR  349 (1310)
Q Consensus       344 t~~yv~  349 (1310)
                      |+.|++
T Consensus       159 t~~y~a  164 (316)
T cd05619         159 TPDYIA  164 (316)
T ss_pred             CccccC
Confidence            555544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.94  E-value=3.4e-27  Score=269.96  Aligned_cols=101  Identities=23%  Similarity=0.490  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||+|||++||+||||||+||+++.  ++.+||+|||++......    .....+++.|+|||++.+ ..++
T Consensus       123 ~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~  196 (345)
T cd07877         123 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYN  196 (345)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC--CCCEEEeccccccccccc----ccccccCCCccCHHHHhCccCCC
Confidence            445679999999999999999999999999986  456999999998654321    112245688999999876 4688


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      .++|+|||||++|+|++|..||.+.+..
T Consensus       197 ~~~DvwslG~il~el~~g~~pf~~~~~~  224 (345)
T cd07877         197 QTVDIWSVGCIMAELLTGRTLFPGTDHI  224 (345)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            8999999999999999999999876543

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.94  E-value=4.9e-27  Score=267.24  Aligned_cols=103  Identities=25%  Similarity=0.486  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++|++||||||+|||++.  +..+||+|||+++.....+. ......++..|+|||.+.+ ..++
T Consensus       111 ~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  187 (337)
T cd07858         111 QYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA--NCDLKICDFGLARTTSEKGD-FMTEYVVTRWYRAPELLLNCSEYT  187 (337)
T ss_pred             HHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEEECcCccccccCCCcc-cccccccccCccChHHHhcCCCCC
Confidence            445679999999999999999999999999975  45699999999876543221 1122345688999998875 4688


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      .++|+|||||++|+|++|.+||.+.+.
T Consensus       188 ~~~DiwslG~il~~l~~g~~pf~~~~~  214 (337)
T cd07858         188 TAIDVWSVGCIFAELLGRKPLFPGKDY  214 (337)
T ss_pred             CcccHHHHHHHHHHHHcCCCCCCCCCh
Confidence            999999999999999999999987653

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.94  E-value=4.9e-27  Score=266.43  Aligned_cols=106  Identities=22%  Similarity=0.424  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc---cccCCCCCCcccccccccC-C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---IHPINTPNPEFAAPEVLAE-E 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~---~~~~~tGtp~Y~APEvl~~-~ 1024 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++........   ......|++.|+|||++.+ .
T Consensus       108 ~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  185 (332)
T cd07857         108 QSFIYQILCGLKYIHSANVLHRDLKPGNLLVNA--DCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQ  185 (332)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcC--CCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCC
Confidence            345679999999999999999999999999976  456999999998765422111   1122356789999998765 4


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++.++|+||+||++|+|++|.+||.+.+...
T Consensus       186 ~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~  217 (332)
T cd07857         186 SYTKAIDVWSVGCILAELLGRKPVFKGKDYVD  217 (332)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH
Confidence            68899999999999999999999998766443

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.94  E-value=8e-27  Score=263.79  Aligned_cols=219  Identities=20%  Similarity=0.293  Sum_probs=162.9

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.++.+++.||||++.+..   ......+.+|+.+++.+ +||||++++++|...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999999999999999997532   22344567899999888 799999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+...+.+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.... .......++
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG--HIKIADFGMCKEGILGGVTTSTFCG  158 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC--cEEecccCCCeecCcCCCcccceec
Confidence            99999988877899999999999999999999999999999999999998765  799999999976322 222334456


Q ss_pred             chHHHhhhcC--CCc------cccC-------CCCCCCCCCCcchhhh-h-----------hhcccchhhchhhhhhhcc
Q psy5279         344 DVRYVRQALR--HPW------LNFA-------DRKPTEDTPKLNTDAL-R-----------NYYNLYKDWYGNAAVRRYY  396 (1310)
Q Consensus       344 t~~yv~~~~r--~P~------l~~~-------~~~~~~~~p~~~~~~~-~-----------~~~~~~~D~~~~~~l~~~~  396 (1310)
                      |+.|+++...  .++      +.+|       .....+.  ..+...+ .           .+...+.|++...+..+..
T Consensus       159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~  236 (318)
T cd05570         159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFE--GDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPE  236 (318)
T ss_pred             CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCC--CCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHH
Confidence            6655543211  010      0000       0000010  0001110 0           1122335666666777788


Q ss_pred             cCCCC-----CCccCCCcce
Q psy5279         397 RRRPL-----NSCYTHPSRM  411 (1310)
Q Consensus       397 ~r~~~-----~~cl~hpw~~  411 (1310)
                      .|+++     .+++.|||..
T Consensus       237 ~R~s~~~~~~~~ll~~~~~~  256 (318)
T cd05570         237 KRLGCLPTGEQDIKGHPFFR  256 (318)
T ss_pred             HcCCCCCCCHHHHhcCCCcC
Confidence            99999     9999999974

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.94  E-value=5.1e-27  Score=252.78  Aligned_cols=102  Identities=20%  Similarity=0.363  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++||+|+||||+||+++.. ...+||+|||++.........  ....+++.|+|||.+.+..++.
T Consensus       104 ~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~  180 (256)
T cd08220         104 LHFFVQILLALHHVHTKLILHRDLKTQNILLDKH-KMVVKIGDFGISKILSSKSKA--YTVVGTPCYISPELCEGKPYNQ  180 (256)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC-CCEEEEccCCCceecCCCccc--cccccCCcccCchhccCCCCCc
Confidence            4456799999999999999999999999999753 346899999998765432211  1234668999999999888899


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|+|||||++|+|++|..||.+.+
T Consensus       181 ~~Dv~slG~~l~~l~~~~~~~~~~~  205 (256)
T cd08220         181 KSDIWALGCVLYELASLKRAFEAAN  205 (256)
T ss_pred             ccchHHHHHHHHHHHhCCCCcccCc
Confidence            9999999999999999999996543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.94  E-value=1.1e-26  Score=262.27  Aligned_cols=160  Identities=29%  Similarity=0.459  Sum_probs=134.5

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHH-HHHHhcCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNEL-DIMNQLCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI-~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||.||+|.+..+|+.||+|++.+...   .....+.+|+ .+++.++|||||+++++|.+.+.+|+|||||+|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            469999999999999999999999999975321   2223344555 468889999999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec-CCCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT-SFGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~-~~~~l~~~~~  343 (1310)
                      |+|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++... ........++
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGLCKEGVEPEETTSTFCG  158 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEccCCCCccCCCCCCccccccC
Confidence            99999988877899999999999999999999999999999999999998765  79999999998642 2233344566


Q ss_pred             chHHHhh
Q psy5279         344 DVRYVRQ  350 (1310)
Q Consensus       344 t~~yv~~  350 (1310)
                      |+.|+++
T Consensus       159 t~~y~aP  165 (321)
T cd05603         159 TPEYLAP  165 (321)
T ss_pred             CcccCCH
Confidence            7766654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.94  E-value=2.8e-26  Score=263.30  Aligned_cols=150  Identities=23%  Similarity=0.370  Sum_probs=128.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD----  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~----  253 (1310)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||+|++....  ......+.+|+.+|+.++||||++++++|...+    
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   97 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE   97 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence            45688999999999999999999999999999999986432  233456778999999999999999999987554    


Q ss_pred             --eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         254 --SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       254 --~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                        .+|+||||+.++ |...+.  ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus        98 ~~~~~lv~e~~~~~-l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~--~~kl~Dfg~a~~  172 (359)
T cd07876          98 FQDVYLVMELMDAN-LCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLART  172 (359)
T ss_pred             cceeEEEEeCCCcC-HHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEecCCCccc
Confidence              579999999864 555543  3488999999999999999999999999999999999998655  799999999986


Q ss_pred             ecC
Q psy5279         332 ITS  334 (1310)
Q Consensus       332 i~~  334 (1310)
                      ...
T Consensus       173 ~~~  175 (359)
T cd07876         173 ACT  175 (359)
T ss_pred             ccc
Confidence            544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.3e-27  Score=263.20  Aligned_cols=159  Identities=21%  Similarity=0.350  Sum_probs=121.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++||+||||||+|||++.  ...++|+|||++.........  ....|++.|+|||++.+..++.
T Consensus       105 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~  180 (285)
T cd05605         105 VFYAAEITCGLEDLHRERIVYRDLKPENILLDD--YGHIRISDLGLAVEIPEGETI--RGRVGTVGYMAPEVVKNERYTF  180 (285)
T ss_pred             HHHHHHHHHHHHHHHHCCcEecCCCHHHEEECC--CCCEEEeeCCCceecCCCCcc--ccccCCCCccCcHHhcCCCCCc
Confidence            445679999999999999999999999999975  456999999998765322211  2235678999999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccccc-ccccchhccHHHHHHHHHhcc-CCcchh-----cHHhhhC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR-FEYLFKELTQEATRFLMLIFK-HEVDWI-----TLANNID 1101 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~-f~~~~~~lS~eakdLL~~il~-~~~~ri-----t~~e~L~ 1101 (1310)
                      ++|+||+||++|+|++|..||.+.+.......+...... .......++...++|+.+|+. +|.+|+     ++.+++.
T Consensus       181 ~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         181 SPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             cccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence            999999999999999999999987654332222111111 112234578899999999886 566788     7889999


Q ss_pred             CCcccccccc
Q psy5279        1102 HEFWHVKDLK 1111 (1310)
Q Consensus      1102 H~f~~~~~l~ 1111 (1310)
                      |+|+...+.+
T Consensus       261 ~~~~~~~~~~  270 (285)
T cd05605         261 HPFFRTANFK  270 (285)
T ss_pred             CcCccCCCHH
Confidence            9998765543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.94  E-value=7.2e-27  Score=251.77  Aligned_cols=103  Identities=25%  Similarity=0.437  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++|++|+||||+||+++.. ...+||+|||.+......... .....|++.|+|||++.+..++.
T Consensus       104 ~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~  181 (257)
T cd08225         104 LSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKN-GMVAKLGDFGIARQLNDSMEL-AYTCVGTPYYLSPEICQNRPYNN  181 (257)
T ss_pred             HHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCC-CCeEEecccccchhccCCccc-ccccCCCccccCHHHHcCCCCCc
Confidence            3456799999999999999999999999999753 235799999988655432211 12234678999999998888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|+|||||++|+|++|..||.+.+
T Consensus       182 ~~Dv~slG~il~~l~~g~~p~~~~~  206 (257)
T cd08225         182 KTDIWSLGCVLYELCTLKHPFEGNN  206 (257)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCcc
Confidence            9999999999999999999996543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.6e-26  Score=256.47  Aligned_cols=149  Identities=28%  Similarity=0.458  Sum_probs=132.0

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .|++.+.||+|+||.||++.+..+++.||+|++.....   .....+.+|+.+|+.++||||+++++.+.+++.+++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            37889999999999999999999999999999865322   223456789999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         261 LAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       261 y~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |++||+|...+...  ..+++..+..++.|++.||.|||++||+||||||+|||+++++  .+||+|||+++.+..
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~~l~Dfg~~~~~~~  154 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYG--HIRISDLGLAVEIPE  154 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCC--CEEEeeCCCceecCC
Confidence            99999998877543  3589999999999999999999999999999999999997654  799999999987644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.94  E-value=3.1e-27  Score=260.18  Aligned_cols=97  Identities=24%  Similarity=0.427  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++|++||||||+||+++..+ ..++|+|||++......     ....+++.|+|||++.+..++.+
T Consensus       113 ~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-~~~~l~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~  186 (267)
T PHA03390        113 KIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK-DRIYLCDYGLCKIIGTP-----SCYDGTLDYFSPEKIKGHNYDVS  186 (267)
T ss_pred             HHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC-CeEEEecCccceecCCC-----ccCCCCCcccChhhhcCCCCCch
Confidence            3466999999999999999999999999998632 26999999998765322     12346789999999999899999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      +|+|||||++|+|++|..||...
T Consensus       187 ~DvwslG~il~~l~~g~~p~~~~  209 (267)
T PHA03390        187 FDWWAVGVLTYELLTGKHPFKED  209 (267)
T ss_pred             hhHHHHHHHHHHHHHCCCCCCCC
Confidence            99999999999999999999744

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.94  E-value=7.9e-27  Score=251.13  Aligned_cols=102  Identities=25%  Similarity=0.387  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHH-----HCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC
Q psy5279         949 AYCVTSVLDGLQYLH-----WRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE 1023 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLH-----s~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~ 1023 (1310)
                      ..++.||+.||.|||     +.+|+|+||||+||+++.  +..+||+|||++......... .....+++.|+|||++.+
T Consensus       108 ~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~--~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~~pE~~~~  184 (265)
T cd08217         108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA--NNNVKLGDFGLAKILGHDSSF-AKTYVGTPYYMSPEQLNH  184 (265)
T ss_pred             HHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEec--CCCEEEecccccccccCCccc-ccccccCCCccChhhhcC
Confidence            445779999999999     999999999999999986  467999999998765432221 112346789999999998


Q ss_pred             CCCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1024 EPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1024 ~~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ..++.++|+|||||++|+|++|..||.+.+
T Consensus       185 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  214 (265)
T cd08217         185 MSYDEKSDIWSLGCLIYELCALSPPFTARN  214 (265)
T ss_pred             CCCCchhHHHHHHHHHHHHHHCCCcccCcC
Confidence            889999999999999999999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.94  E-value=6.4e-27  Score=254.80  Aligned_cols=103  Identities=27%  Similarity=0.639  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-------------------ccccCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-------------------LIHPIN 1009 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-------------------~~~~~~ 1009 (1310)
                      ..++.|++.||.|||++|++|+||||+||+++.  ++.++|+|||++........                   ......
T Consensus       105 ~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~--~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (280)
T cd05581         105 RFYAAEILLALEYLHSKGIIHRDLKPENILLDK--DMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASF  182 (280)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEecCCccccccCCccccccCCCCCccccccccccccccccc
Confidence            345679999999999999999999999999975  45699999998865432211                   111223


Q ss_pred             CCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1010 tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      .+++.|+|||++....++.++|+|||||++++|++|..||...+
T Consensus       183 ~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  226 (280)
T cd05581         183 VGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN  226 (280)
T ss_pred             cCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence            45688999999988888899999999999999999999997654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.94  E-value=5.2e-26  Score=254.90  Aligned_cols=148  Identities=27%  Similarity=0.423  Sum_probs=130.7

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|.+.+.||+|+||.||+|.++.+++.||+|.++.... .....+.+|+.+|+.++||||+++++++..++.+|+||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            579999999999999999999999999999999875432 2334567899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +.+ +|.+.+... ..+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~--~~kl~Dfg~~~~~~  155 (309)
T cd07872          86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG--ELKLADFGLARAKS  155 (309)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEECccccceecC
Confidence            986 777777554 3488999999999999999999999999999999999998655  79999999998653

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.94  E-value=4.4e-26  Score=248.36  Aligned_cols=150  Identities=28%  Similarity=0.444  Sum_probs=137.3

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .+.|++.+.||+|+||.||+|.++.+|+.||+|++..........+.+|+.++++++||||+++++++..++.+|+||||
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            46799999999999999999999999999999999755444455678999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +++|+|.+.+...+.+++.++..++.|++.||+|||++||+||||||+|||++.++  .+||+|||+++.+.
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~--~~~l~dfg~~~~~~  157 (267)
T cd06646          88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG--DVKLADFGVAAKIT  157 (267)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEECcCccceeec
Confidence            99999999988777899999999999999999999999999999999999997655  69999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.2e-26  Score=260.88  Aligned_cols=159  Identities=26%  Similarity=0.446  Sum_probs=134.8

Q ss_pred             ecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhc---CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQL---CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       191 LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L---~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      ||+|+||+||+|.++.+|+.||||++.+...   .....+..|..++..+   +||||++++++|...+.+|+||||++|
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            7999999999999999999999999965321   1222345677777665   699999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.... .......+|
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~g  158 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG--HIALCDFGLSKANLTDNKTTNTFCG  158 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEecCCcCcCCCCCCCCccCccC
Confidence            99999998888899999999999999999999999999999999999998655  799999999986432 333455677


Q ss_pred             chHHHhhh
Q psy5279         344 DVRYVRQA  351 (1310)
Q Consensus       344 t~~yv~~~  351 (1310)
                      |+.|+++.
T Consensus       159 t~~y~aPE  166 (330)
T cd05586         159 TTEYLAPE  166 (330)
T ss_pred             CccccCHH
Confidence            87776653

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.94  E-value=6e-26  Score=258.14  Aligned_cols=200  Identities=21%  Similarity=0.391  Sum_probs=156.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|++.+.||+|+||.||++.++.+++.||+|++.+..   ......+.+|+.++..++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            46899999999999999999999999999999986421   122345788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      ||++||+|.+.+.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+...+..
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~--~~kL~DfG~a~~~~~~~~~  158 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG--HIRLADFGSCLKLMEDGTV  158 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEEeecchheecccCCcc
Confidence            99999999999976 35689999999999999999999999999999999999998654  7999999999876443322


Q ss_pred             --CCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCC
Q psy5279         339 --NPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPL  401 (1310)
Q Consensus       339 --~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~  401 (1310)
                        ...+||+.|+     +|++..+....            ...++...| | +|..+...++.+.|.
T Consensus       159 ~~~~~~gt~~y~-----aPE~~~~~~~~------------~~~~~~~~DvwSlGvil~ell~g~~Pf  208 (332)
T cd05623         159 QSSVAVGTPDYI-----SPEILQAMEDG------------KGKYGPECDWWSLGVCMYEMLYGETPF  208 (332)
T ss_pred             eecccccCcccc-----CHHHHhccccC------------CCCCCCcCCEEeeHHHHHHHhcCCCCC
Confidence              2235555554     45543211000            011333456 3 566666666666654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=1.7e-26  Score=276.86  Aligned_cols=169  Identities=21%  Similarity=0.352  Sum_probs=143.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCC-CcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSS-GRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~T-g~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      +....|.+.+.||+|+||.||+|....+ ++.||+|.+..........+.+|+.+|+.++|||||+++++|..++.+|||
T Consensus        64 ~~~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv  143 (478)
T PTZ00267         64 PREHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI  143 (478)
T ss_pred             CcceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEE
Confidence            3445699999999999999999998887 788999987654444455678899999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         259 SELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||++||+|.+.+..    ...+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus       144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~--~~kL~DFgla~~~~~  221 (478)
T PTZ00267        144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG--IIKLGDFGFSKQYSD  221 (478)
T ss_pred             EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCC--cEEEEeCcCceecCC
Confidence            999999999877643    34589999999999999999999999999999999999998655  799999999998754


Q ss_pred             CC---CCCCcccchHHHhh
Q psy5279         335 FG---KLNPLEYDVRYVRQ  350 (1310)
Q Consensus       335 ~~---~l~~~~~t~~yv~~  350 (1310)
                      ..   .....+||+.|+++
T Consensus       222 ~~~~~~~~~~~gt~~y~aP  240 (478)
T PTZ00267        222 SVSLDVASSFCGTPYYLAP  240 (478)
T ss_pred             ccccccccccCCCccccCH
Confidence            32   23345677766654

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.94  E-value=6e-27  Score=256.96  Aligned_cols=107  Identities=20%  Similarity=0.370  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      +..++.||+.||+|||++||+||||||+||++++  +..+||+|||++........ ......+++.|+|||++.+. .+
T Consensus       102 ~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~--~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~  178 (284)
T cd07836         102 VKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINK--RGELKLADFGLARAFGIPVN-TFSNEVVTLWYRAPDVLLGSRTY  178 (284)
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC--CCcEEEeecchhhhhcCCcc-ccccccccccccChHHhcCCCCC
Confidence            3456789999999999999999999999999975  45699999998865432111 11122356789999998764 56


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      +.++|+|||||++|+|++|..||.+.+..+.
T Consensus       179 ~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~  209 (284)
T cd07836         179 STSIDIWSVGCIMAEMITGRPLFPGTNNEDQ  209 (284)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence            8899999999999999999999988765443

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.94  E-value=1.5e-26  Score=250.25  Aligned_cols=101  Identities=28%  Similarity=0.535  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccc---cCCCCCCcccccccccCCC-
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH---PINTPNPEFAAPEVLAEEP- 1025 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~---~~~tGtp~Y~APEvl~~~~- 1025 (1310)
                      .++.|++.||.|||++||+|+||||+||+++.  ...+||+|||++...........   ....+++.|+|||++.+.. 
T Consensus       103 ~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~--~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~  180 (264)
T cd06626         103 VYTLQLLEGLAYLHSHGIVHRDIKPANIFLDH--NGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKG  180 (264)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCC
Confidence            34679999999999999999999999999986  45699999999876543222111   1234568999999998766 


Q ss_pred             --CCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1026 --IFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1026 --ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                        ++.++|+|||||++|+|++|..||.+.
T Consensus       181 ~~~~~~~Dv~s~G~il~~l~~g~~pf~~~  209 (264)
T cd06626         181 KGHGRAADIWSLGCVVLEMATGKRPWSEL  209 (264)
T ss_pred             CCCCcccchHHHHHHHHHHHhCCCCccCC
Confidence              788999999999999999999999643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.94  E-value=7.1e-26  Score=250.03  Aligned_cols=164  Identities=27%  Similarity=0.406  Sum_probs=130.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcC-CCcEEEEEEEecCCc--chHHHHHHHHHHHHhc---CCCCcceEEEEEE-----e
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERS-SGRNYAAKVMTGKGN--QYKSLFKNELDIMNQL---CHRNLVRLHDSYE-----T  251 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~-Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L---~HPNIVkL~d~f~-----~  251 (1310)
                      ++|++.+.||+|+||+||+|.+.. +|+.||+|++.....  .....+.+|+.+++.+   +||||++++++|.     .
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            468999999999999999999864 578899999865322  2234466788887776   6999999999985     3


Q ss_pred             CCeEEEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         252 KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       252 ~~~lyLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                      ...+++||||+. ++|.+.+...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~--~~kl~Dfg~~  157 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLA  157 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCC--CEEEccccce
Confidence            456999999997 4787777543  3489999999999999999999999999999999999998655  7999999999


Q ss_pred             eeecCCCCCCCcccchHHHh
Q psy5279         330 RRITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       330 r~i~~~~~l~~~~~t~~yv~  349 (1310)
                      +............+|+.|++
T Consensus       158 ~~~~~~~~~~~~~~~~~y~a  177 (290)
T cd07862         158 RIYSFQMALTSVVVTLWYRA  177 (290)
T ss_pred             EeccCCcccccccccccccC
Confidence            87654433333444444433

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.94  E-value=7.5e-27  Score=254.92  Aligned_cols=100  Identities=30%  Similarity=0.548  Sum_probs=78.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC--C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP--I 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~--y 1026 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.. ...+||+|||++........ ......+++.|+|||.+....  +
T Consensus       111 ~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~-~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~  188 (268)
T cd06624         111 IFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTY-SGVVKISDFGTSKRLAGINP-CTETFTGTLQYMAPEVIDKGPRGY  188 (268)
T ss_pred             HHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC-CCeEEEecchhheecccCCC-ccccCCCCccccChhhhccccccC
Confidence            3456799999999999999999999999999742 34699999998865432211 122234678899999986543  6


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      +.++|+||+||++|+|++|..||.
T Consensus       189 ~~~~Dv~slGvvl~~l~~g~~p~~  212 (268)
T cd06624         189 GAPADIWSLGCTIVEMATGKPPFI  212 (268)
T ss_pred             CchhhhHHHHHHHHHHHhCCCCCc
Confidence            788899999999999999988874

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.94  E-value=5e-27  Score=259.73  Aligned_cols=102  Identities=24%  Similarity=0.424  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++........ .....+++.|+|||.+.+. .++
T Consensus       106 ~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~  182 (291)
T cd07870         106 RLFMFQLLRGLAYIHGQHILHRDLKPQNLLISY--LGELKLADFGLARAKSIPSQT-YSSEVVTLWYRPPDVLLGATDYS  182 (291)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCChHHEEEcC--CCcEEEeccccccccCCCCCC-CCCccccccccCCceeecCCCCC
Confidence            345679999999999999999999999999975  457999999988654322111 1222356889999998764 578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      .++|+|||||++|+|++|..||.+.+
T Consensus       183 ~~~Dv~slG~~l~~l~~g~~~f~~~~  208 (291)
T cd07870         183 SALDIWGAGCIFIEMLQGQPAFPGVS  208 (291)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCch
Confidence            89999999999999999999997654

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.94  E-value=5.7e-26  Score=259.01  Aligned_cols=150  Identities=23%  Similarity=0.399  Sum_probs=136.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .++|++.+.||+|+||.||+|.+..+|+.+|+|++.... ......+.+|+++|+.++|||||+++++|...+.+|+|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            478999999999999999999999999999999987542 2344568899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL-SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~-gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |+.||+|.+.+...+.+++..+..++.|++.||.|||++ +|+||||||+|||++.++  .+||+|||+++.+.
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~--~~kL~Dfg~~~~~~  155 (333)
T cd06650          84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLI  155 (333)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC--CEEEeeCCcchhhh
Confidence            999999999998777899999999999999999999975 799999999999998655  79999999998653

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0579|consensus

Probab=99.94  E-value=8.1e-28  Score=280.64  Aligned_cols=230  Identities=24%  Similarity=0.362  Sum_probs=181.0

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      -.+.|++..+||-|+||+||+|..+.|+-.-|.|+|..++....+.+.-||.||..++||+||+|++.|..++.++|..|
T Consensus        30 P~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE  109 (1187)
T KOG0579|consen   30 PRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE  109 (1187)
T ss_pred             HHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence            45789999999999999999999999999999999987777677778889999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCC
Q psy5279         261 LAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKL  338 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l  338 (1310)
                      ||.||-....+..-+ .++|.++..+++|+|.||.|||+++|||||||..|||++-+|  .|+|+|||.+..... ...-
T Consensus       110 FC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldG--dirLADFGVSAKn~~t~qkR  187 (1187)
T KOG0579|consen  110 FCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDG--DIRLADFGVSAKNKSTRQKR  187 (1187)
T ss_pred             ecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecC--cEeeecccccccchhHHhhh
Confidence            999998877776544 499999999999999999999999999999999999999877  799999999765432 2234


Q ss_pred             CCcccchHHHhhh-------cCCCc------cccC-------CCCCCCC----------CCCcchh---hhhhhcccchh
Q psy5279         339 NPLEYDVRYVRQA-------LRHPW------LNFA-------DRKPTED----------TPKLNTD---ALRNYYNLYKD  385 (1310)
Q Consensus       339 ~~~~~t~~yv~~~-------~r~P~------l~~~-------~~~~~~~----------~p~~~~~---~~~~~~~~~~D  385 (1310)
                      .++.|||.++++.       ...|+      +.||       ..+|.-.          ...+++.   +-+.|...++|
T Consensus       188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~D  267 (1187)
T KOG0579|consen  188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSD  267 (1187)
T ss_pred             ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHH
Confidence            5567777666542       12222      1111       1111100          0011111   11234455588


Q ss_pred             hchhhhhhhcccCCCCCCccCCCccee
Q psy5279         386 WYGNAAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       386 ~~~~~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      |.-.++++....|+|+++.|.|||...
T Consensus       268 fLk~cL~Knp~~Rp~aaqll~Hpfv~~  294 (1187)
T KOG0579|consen  268 FLKRCLVKNPRNRPPAAQLLKHPFVQN  294 (1187)
T ss_pred             HHHHHHhcCCccCCCHHHHhhCccccc
Confidence            888899999999999999999999753

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.93  E-value=1.4e-26  Score=258.81  Aligned_cols=103  Identities=25%  Similarity=0.479  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc------cccCCCCCCccccccccc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL------IHPINTPNPEFAAPEVLA 1022 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~------~~~~~tGtp~Y~APEvl~ 1022 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||.+......+..      ......++..|+|||++.
T Consensus       104 ~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~--~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  181 (314)
T cd08216         104 AFILKDVLNALDYIHSKGFIHRSVKASHILLSG--DGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQ  181 (314)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCcceEEEec--CCceEEecCccceeeccccccccccccccccccccccccCHHHhc
Confidence            345679999999999999999999999999985  456999999988654322211      111233567899999997


Q ss_pred             CC--CCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1023 EE--PIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1023 ~~--~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ..  .++.++|+||+||++|+|++|..||....
T Consensus       182 ~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~  214 (314)
T cd08216         182 QNLQGYNEKSDIYSVGITACELANGHVPFKDMP  214 (314)
T ss_pred             CCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Confidence            63  58899999999999999999999997654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.93  E-value=8e-26  Score=248.97  Aligned_cols=159  Identities=31%  Similarity=0.445  Sum_probs=129.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhc---CCCCcceEEEEEEe-----CC
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQL---CHRNLVRLHDSYET-----KD  253 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L---~HPNIVkL~d~f~~-----~~  253 (1310)
                      +|++.+.||+|+||.||+|.++.+|+.||+|.++....  .....+.+|+.+++.+   +||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            48899999999999999999999999999999875422  2233456788877765   79999999999865     34


Q ss_pred             eEEEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         254 SFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                      .+++||||+.+ +|.+.+...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~--~~kl~dfg~~~~  157 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG--QVKLADFGLARI  157 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--CEEECccCcccc
Confidence            68999999985 777777543  3489999999999999999999999999999999999998655  799999999987


Q ss_pred             ecCCCCCCCcccch
Q psy5279         332 ITSFGKLNPLEYDV  345 (1310)
Q Consensus       332 i~~~~~l~~~~~t~  345 (1310)
                      ........+..+|+
T Consensus       158 ~~~~~~~~~~~~~~  171 (288)
T cd07863         158 YSCQMALTPVVVTL  171 (288)
T ss_pred             ccCcccCCCccccc
Confidence            65433333333333

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.93  E-value=2.9e-26  Score=251.48  Aligned_cols=105  Identities=23%  Similarity=0.425  Sum_probs=85.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.|++.||.|||++|++|+||||+||+++.  ...++|+|||++.........  ....++..|+|||++.+ ..++
T Consensus       102 ~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~--~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~  177 (283)
T cd07830         102 RSIIYQILQGLAHIHKHGFFHRDLKPENLLVSG--PEVVKIADFGLAREIRSRPPY--TDYVSTRWYRAPEILLRSTSYS  177 (283)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC--CCCEEEeecccceeccCCCCc--CCCCCcccccCceeeecCcCcC
Confidence            345679999999999999999999999999986  567999999998765432221  12235678999998854 4578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++|+|||||++|+|++|.+||.+.+..+.
T Consensus       178 ~~~Di~s~G~~l~el~~g~~~~~~~~~~~~  207 (283)
T cd07830         178 SPVDIWALGCIMAELYTLRPLFPGSSEIDQ  207 (283)
T ss_pred             CccchhhHHHHHHHHHhCCCccCCCChHHH
Confidence            899999999999999999999988765443

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.93  E-value=9.6e-26  Score=256.24  Aligned_cols=191  Identities=22%  Similarity=0.356  Sum_probs=153.2

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||+||+|.++.+++.||+|++.+...   .....+.+|+.++.++ +||||++++++|...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            469999999999999999999999999975422   2344577899999888 699999999999999999999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCCCCccc
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKLNPLEY  343 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l~~~~~  343 (1310)
                      |+|...+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++.... .......+|
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG--HIKLTDYGMCKEGLGPGDTTSTFCG  158 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC--CEEEeccccceeccCCCCceecccC
Confidence            99999888777899999999999999999999999999999999999998765  799999999986432 223344566


Q ss_pred             chHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCC
Q psy5279         344 DVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNS  403 (1310)
Q Consensus       344 t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~  403 (1310)
                      |+.|+     +|++..+.                 .++...| | .|..+...++.+.|.+.
T Consensus       159 t~~y~-----aPE~~~~~-----------------~~~~~~DiwslGvil~ell~g~~pf~~  198 (327)
T cd05617         159 TPNYI-----APEILRGE-----------------EYGFSVDWWALGVLMFEMMAGRSPFDI  198 (327)
T ss_pred             CcccC-----CHHHHCCC-----------------CCCchheeehhHHHHHHHHhCCCCCCc
Confidence            66554     45543211                 1233456 3 56667777777776643

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.93  E-value=4.3e-26  Score=248.46  Aligned_cols=150  Identities=29%  Similarity=0.455  Sum_probs=137.2

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .+.|.+.+.||+|+||.||+|.+..+++.||+|+++.........+.+|+.+++.++||||+++++++...+.+|+||||
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~   87 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF   87 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence            35788999999999999999999999999999998765444445678899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +++++|.+.+...+.+++.++..++.|++.||.|||++||+||||||+|||++.++  .+||+|||++....
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~--~~~l~dfg~~~~~~  157 (267)
T cd06645          88 CGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNG--HVKLADFGVSAQIT  157 (267)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEECcceeeeEcc
Confidence            99999999988778899999999999999999999999999999999999998655  79999999998654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.93  E-value=4.4e-26  Score=260.96  Aligned_cols=164  Identities=23%  Similarity=0.338  Sum_probs=134.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD----  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~----  253 (1310)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||||++....  ......+.+|+.+|+.++||||++++++|....    
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            45688999999999999999999999999999999987532  223455778999999999999999999986543    


Q ss_pred             --eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         254 --SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       254 --~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                        .+|+||||+.+ .|.+.+..  .+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus        94 ~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~--~~kl~Dfg~~~~  168 (355)
T cd07874          94 FQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLART  168 (355)
T ss_pred             cceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCC--CEEEeeCccccc
Confidence              57999999986 46555543  488999999999999999999999999999999999998655  799999999987


Q ss_pred             ecCCCCCCCcccchHHH
Q psy5279         332 ITSFGKLNPLEYDVRYV  348 (1310)
Q Consensus       332 i~~~~~l~~~~~t~~yv  348 (1310)
                      ........+..+|+.|+
T Consensus       169 ~~~~~~~~~~~~t~~y~  185 (355)
T cd07874         169 AGTSFMMTPYVVTRYYR  185 (355)
T ss_pred             CCCccccCCccccCCcc
Confidence            65543334444444443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.93  E-value=4.2e-26  Score=252.55  Aligned_cols=142  Identities=25%  Similarity=0.412  Sum_probs=125.3

Q ss_pred             ecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCCch
Q psy5279         191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGEL  267 (1310)
Q Consensus       191 LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GGeL  267 (1310)
                      ||+|+||+||+|.++.+|+.||+|++.....   ...+.+..|+.+|+.++||||+++.++|..++.+|+||||++||+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            7999999999999999999999999875322   1234567899999999999999999999999999999999999999


Q ss_pred             HHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         268 LHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       268 ~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ...+..    ...+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.+..
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l~dfg~~~~~~~  149 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDG--NVRISDLGLAVELKD  149 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEeeCccceecCC
Confidence            877632    34589999999999999999999999999999999999997654  799999999987644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.93  E-value=1.1e-26  Score=265.45  Aligned_cols=101  Identities=25%  Similarity=0.509  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  .+.+||+|||++.......    ....+++.|+|||.+.+ ..++
T Consensus       121 ~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~  194 (343)
T cd07880         121 QFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE--DCELKILDFGLARQTDSEM----TGYVVTRWYRAPEVILNWMHYT  194 (343)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEeecccccccccCc----cccccCCcccCHHHHhCCCCCC
Confidence            445779999999999999999999999999985  4569999999987543211    12245688999999876 3578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      .++|+|||||++|+|++|..||.+.+..
T Consensus       195 ~~~Di~slG~ll~~l~~g~~pf~~~~~~  222 (343)
T cd07880         195 QTVDIWSVGCIMAEMLTGKPLFKGHDHL  222 (343)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            8999999999999999999999876543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG4645|consensus

Probab=99.93  E-value=1.2e-27  Score=298.19  Aligned_cols=237  Identities=25%  Similarity=0.390  Sum_probs=199.6

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ..++-++.....||.|.||.||.|.+.+||...|+|-|.....  .....+.+|..+|..|+|||+|+++++=.+.+.+|
T Consensus      1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred             ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence            3566778888999999999999999999999999998764322  23345678999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-  335 (1310)
                      |.||||.||+|.+.+...+...|.-.+.|..|++.|+.|||++|||||||||+||||+.+|  .||++|||-|+.+.+. 
T Consensus      1311 IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g--~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG--LIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred             HHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCC--cEEeecccceeEecCch
Confidence            9999999999999988777788999999999999999999999999999999999999766  8999999999988654 


Q ss_pred             ----CCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCCccCCCc
Q psy5279         336 ----GKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNSCYTHPS  409 (1310)
Q Consensus       336 ----~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~cl~hpw  409 (1310)
                          +.++.+.|||.|++     |++-.+..-              +-..-+.| | .||.++++.++|.||++ +.+.|
T Consensus      1389 ~~~~~el~~~~GT~~YMA-----PEvit~t~~--------------kG~~~A~DiWslGCVVlEM~tGkrPW~~-~dne~ 1448 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMA-----PEVITGTKG--------------KGHGGAADIWSLGCVVLEMATGKRPWAE-LDNEW 1448 (1509)
T ss_pred             hcCCHHHHhhcCCchhcC-----chhhccccc--------------CCCCcchhhhcccceEEEeecCCCchhh-ccchh
Confidence                34566788888886     554322110              01112445 7 89999999999999998 59999


Q ss_pred             ceecCCCCCCCCCCCCcceeccccccccccc
Q psy5279         410 RMIYPPGTQFTPEPTPDKVLVSRDLRDVKTW  440 (1310)
Q Consensus       410 ~~~~~~~~~~tp~~~p~~i~v~~~~rD~~~~  440 (1310)
                      +--+.-+.+-+|+ +|..  +|..+|||.+.
T Consensus      1449 aIMy~V~~gh~Pq-~P~~--ls~~g~dFle~ 1476 (1509)
T KOG4645|consen 1449 AIMYHVAAGHKPQ-IPER--LSSEGRDFLEH 1476 (1509)
T ss_pred             HHHhHHhccCCCC-Cchh--hhHhHHHHHHH
Confidence            8788888888888 8888  89999999884

>KOG0696|consensus

Probab=99.93  E-value=1.4e-26  Score=261.58  Aligned_cols=236  Identities=22%  Similarity=0.341  Sum_probs=179.5

Q ss_pred             cccccchhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCc
Q psy5279         856 YGAADTYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTS  933 (1310)
Q Consensus       856 ~~~~~~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~  933 (1310)
                      .+..|.||||.||+.  +..--+.+.+-|+.+... .+..||+....-+++-..-..++|+++.+|+...-|+       
T Consensus       371 kgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL-~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQ-------  442 (683)
T KOG0696|consen  371 KGTDELYAIKILKKDVIIQDDDVECTMVEKRVLAL-PGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-------  442 (683)
T ss_pred             cCcchhhhhhhhccceeeecCcccceehhhhheec-CCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHH-------
Confidence            356789999999987  465555666666655544 3345788877666664444456777766665332222       


Q ss_pred             ccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCC
Q psy5279         934 TLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013 (1310)
Q Consensus       934 l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp 1013 (1310)
                           +..-..+..+.+++..|+-||-|||++|||.||||.+|||+++  .++|||+|||+++..-- +...+...+|||
T Consensus       443 -----Q~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~--eGHiKi~DFGmcKEni~-~~~TTkTFCGTP  514 (683)
T KOG0696|consen  443 -----QVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIF-DGVTTKTFCGTP  514 (683)
T ss_pred             -----HhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEecc--CCceEeeeccccccccc-CCcceeeecCCC
Confidence                 2222334557889999999999999999999999999999986  56899999999875332 223345567889


Q ss_pred             cccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhc-cCCcc
Q psy5279        1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIF-KHEVD 1092 (1310)
Q Consensus      1014 ~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il-~~~~~ 1092 (1310)
                      .|+|||++..++|+.++||||+||+|||||.|++||.|+++.++.+.|......+|   +.+|.+|.++.+.++ +.|.+
T Consensus       515 dYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyP---KslSkEAv~ickg~ltK~P~k  591 (683)
T KOG0696|consen  515 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYP---KSLSKEAVAICKGLLTKHPGK  591 (683)
T ss_pred             cccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCc---ccccHHHHHHHHHHhhcCCcc
Confidence            99999999999999999999999999999999999999999999999987776666   678999999998766 56666


Q ss_pred             hhcH-----HhhhCCCccccccc
Q psy5279        1093 WITL-----ANNIDHEFWHVKDL 1110 (1310)
Q Consensus      1093 rit~-----~e~L~H~f~~~~~l 1110 (1310)
                      |...     .++..|+||...+.
T Consensus       592 RLGcg~~ge~di~~H~FFR~iDW  614 (683)
T KOG0696|consen  592 RLGCGPEGERDIREHPFFRRIDW  614 (683)
T ss_pred             ccCCCCccccchhhCcchhhccH
Confidence            6544     34567888765443

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.93  E-value=3.2e-26  Score=264.31  Aligned_cols=147  Identities=24%  Similarity=0.372  Sum_probs=130.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-----eEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-----SFT  256 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-----~ly  256 (1310)
                      .|++.+.||+|+||.||+|.+..+|+.||||++....  ......+.+|+.+|+.++||||+++++++..++     .+|
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            3678899999999999999999999999999986432  223345789999999999999999999999887     899


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +||||+. ++|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+...
T Consensus        81 lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~--~~kL~Dfg~a~~~~  154 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC--VLKICDFGLARVEE  154 (372)
T ss_pred             EEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCC--CEEeccccceeecc
Confidence            9999997 57888887777899999999999999999999999999999999999998655  89999999998754

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.93  E-value=8.8e-27  Score=251.87  Aligned_cols=99  Identities=20%  Similarity=0.379  Sum_probs=81.9

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.|++.||.|||++|++|+||+|+|||++.  +..++|+|||++......... .....+++.|+|||++.+..++.++
T Consensus       106 ~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~--~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~  182 (256)
T cd08218         106 WFVQICLALKHVHDRKILHRDIKSQNIFLTK--DGTIKLGDFGIARVLNSTVEL-ARTCIGTPYYLSPEICENRPYNNKS  182 (256)
T ss_pred             HHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEEEeeccceeecCcchhh-hhhccCCccccCHHHhCCCCCCCcc
Confidence            4569999999999999999999999999975  456999999998755332211 1122456889999999988889999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCC
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      |+|||||++|+|++|..||...
T Consensus       183 Dv~slG~i~~~l~~g~~~~~~~  204 (256)
T cd08218         183 DIWALGCVLYEMCTLKHAFEAG  204 (256)
T ss_pred             chhHHHHHHHHHHcCCCCccCC
Confidence            9999999999999999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.93  E-value=5.5e-26  Score=248.22  Aligned_cols=106  Identities=24%  Similarity=0.388  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.|++.||.|||++||+||||+|+||+++.  +..+||+|||++......... .....+++.|+|||.+.+. .++
T Consensus       101 ~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~--~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  177 (282)
T cd07829         101 KSIMYQLLRGLAYCHSHRILHRDLKPQNILINR--DGVLKLADFGLARAFGIPLRT-YTHEVVTLWYRAPEILLGSKHYS  177 (282)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCChheEEEcC--CCCEEEecCCcccccCCCccc-cCccccCcCcCChHHhcCCcCCC
Confidence            345679999999999999999999999999986  466999999988755332211 1122345789999998776 788


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++|+|||||++|+|++|.+||.+.+..+.
T Consensus       178 ~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~  207 (282)
T cd07829         178 TAVDIWSVGCIFAEMITGKPLFPGDSEIDQ  207 (282)
T ss_pred             ccccHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence            999999999999999999999988765443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.1e-26  Score=254.27  Aligned_cols=99  Identities=27%  Similarity=0.517  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys~ 1028 (1310)
                      .++.|++.||.|||++||+|+||+|+||+++.  ...++|+|||++........ ......|++.|+|||.+.+. .++.
T Consensus       105 ~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~  181 (277)
T cd06917         105 VIIREVLVALKYIHKVGVIHRDIKAANILVTN--TGNVKLCDFGVAALLNQNSS-KRSTFVGTPYWMAPEVITEGKYYDT  181 (277)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCcCHHHEEEcC--CCCEEEccCCceeecCCCcc-ccccccCCcceeCHHHhccCCcccc
Confidence            45679999999999999999999999999986  56799999999876543221 12223467889999988653 4678


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ++|+|||||++|+|++|..||.+
T Consensus       182 ~~Dv~slG~~l~~ll~g~~p~~~  204 (277)
T cd06917         182 KADIWSLGITIYEMATGNPPYSD  204 (277)
T ss_pred             chhHHHHHHHHHHHHhCCCCCCC
Confidence            89999999999999999998854

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.93  E-value=2.4e-26  Score=261.55  Aligned_cols=151  Identities=24%  Similarity=0.394  Sum_probs=130.0

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeC-----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETK-----  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-----  252 (1310)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||||++.....  .....+.+|+.+|+.++||||++++++|...     
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            466889999999999999999999999999999999865322  2334567899999999999999999988644     


Q ss_pred             -CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         253 -DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       253 -~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                       ..+|++||++ |++|.+.+. ...+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus        92 ~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~--~~kl~Dfg~~~~  167 (343)
T cd07878          92 FNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC--ELRILDFGLARQ  167 (343)
T ss_pred             cCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCC--CEEEcCCcccee
Confidence             4579999998 667876654 45699999999999999999999999999999999999998655  799999999987


Q ss_pred             ecC
Q psy5279         332 ITS  334 (1310)
Q Consensus       332 i~~  334 (1310)
                      ...
T Consensus       168 ~~~  170 (343)
T cd07878         168 ADD  170 (343)
T ss_pred             cCC
Confidence            643

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.93  E-value=1.2e-25  Score=254.95  Aligned_cols=195  Identities=22%  Similarity=0.359  Sum_probs=152.8

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcC-CCCcceEEEEEEeCCeEEEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLC-HRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .|++.+.||+|+||.||+|.++.+|+.||+|++.+..   ......+..|+.+++.+. ||+|+++++++.+.+.+|+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            3678899999999999999999999999999997532   223345678899998885 577889999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l  338 (1310)
                      ||++||+|.+.+...+.+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.....+ ..
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~--~ikL~Dfg~~~~~~~~~~~~  158 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG--HIKIADFGMCKEHMVDGVTT  158 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEEeccccccccCCCCccc
Confidence            9999999999998878899999999999999999999999999999999999998655  79999999998653322 22


Q ss_pred             CCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCC
Q psy5279         339 NPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       339 ~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~  402 (1310)
                      ...+||+.|+     +|++..+.                 .++...| | .|..+...++++.|..
T Consensus       159 ~~~~gt~~y~-----aPE~~~~~-----------------~~~~~~DiwslGvil~elltG~~pf~  202 (323)
T cd05615         159 RTFCGTPDYI-----APEIIAYQ-----------------PYGKSVDWWAYGVLLYEMLAGQPPFD  202 (323)
T ss_pred             cCccCCcccc-----CHHHHcCC-----------------CCCCccchhhhHHHHHHHHhCCCCCC
Confidence            3345555544     34443111                 1233355 3 4666666666666543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.93  E-value=1.8e-26  Score=250.59  Aligned_cols=101  Identities=27%  Similarity=0.455  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc---cccCCCCCCcccccccccCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~---~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      .++.||+.||.|||++|++||||||+||+++.. ...+||+|||.+.........   ......++..|+|||.+.+..+
T Consensus       107 ~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~  185 (268)
T cd06630         107 NYTEQLLRGLSYLHENQIIHRDVKGANLLIDST-GQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQY  185 (268)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC-CCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCC
Confidence            346799999999999999999999999999752 235899999998765432111   1112346688999999998889


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      +.++|+||+||++|+|++|..||..
T Consensus       186 ~~~~Dv~slG~~l~~l~~g~~p~~~  210 (268)
T cd06630         186 GRSCDVWSVGCVIIEMATAKPPWNA  210 (268)
T ss_pred             CcccchHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999999999854

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.93  E-value=9.1e-26  Score=243.18  Aligned_cols=162  Identities=27%  Similarity=0.477  Sum_probs=139.5

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchH--HHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecC
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK--SLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA  262 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~--~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~  262 (1310)
                      |++.+.||+|+||+||+|.+..+++.||+|++........  ....+|+.+++.++||||+++++++.....+++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            7899999999999999999999999999999987654322  23456999999999999999999999999999999999


Q ss_pred             CCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee-cCCCCCCCc
Q psy5279         263 GGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI-TSFGKLNPL  341 (1310)
Q Consensus       263 ~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i-~~~~~l~~~  341 (1310)
                      .+++|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||++... .........
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~--~~~l~Dfg~~~~~~~~~~~~~~~  158 (260)
T PF00069_consen   81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENG--EVKLIDFGSSVKLSENNENFNPF  158 (260)
T ss_dssp             TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTS--EEEESSGTTTEESTSTTSEBSSS
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccc
Confidence            9999999998777899999999999999999999999999999999999998554  8999999999864 222233344


Q ss_pred             ccchHHH
Q psy5279         342 EYDVRYV  348 (1310)
Q Consensus       342 ~~t~~yv  348 (1310)
                      +++..|.
T Consensus       159 ~~~~~y~  165 (260)
T PF00069_consen  159 VGTPEYM  165 (260)
T ss_dssp             SSSGGGS
T ss_pred             ccccccc
Confidence            4454443

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.93  E-value=1.2e-26  Score=255.34  Aligned_cols=99  Identities=29%  Similarity=0.479  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.|++.||+|||++|++|+||+|+||+++.  +..++|+|||++........ ......++..|+|||++.+..++.++
T Consensus       106 ~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~  182 (277)
T cd06640         106 MLKEILKGLDYLHSEKKIHRDIKAANVLLSE--QGDVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIQQSAYDSKA  182 (277)
T ss_pred             HHHHHHHHHHHHHhCCccCcCCChhhEEEcC--CCCEEEcccccceeccCCcc-ccccccCcccccCHhHhccCCCccHH
Confidence            3568999999999999999999999999985  45699999999876543221 11223456789999999988899999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCC
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      |+|||||++|+|++|..||.+.
T Consensus       183 Dv~slG~il~el~tg~~p~~~~  204 (277)
T cd06640         183 DIWSLGITAIELAKGEPPNSDM  204 (277)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCc
Confidence            9999999999999999998654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.93  E-value=1.4e-26  Score=252.37  Aligned_cols=153  Identities=23%  Similarity=0.324  Sum_probs=114.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc---CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA---EEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~---~~~ 1025 (1310)
                      ..++.|++.||.|||++||+||||||+||+++.  ...+||+|||++...... ........|++.|+|||++.   ...
T Consensus       109 ~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~--~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~  185 (267)
T cd06645         109 AYVSRETLQGLYYLHSKGKMHRDIKGANILLTD--NGHVKLADFGVSAQITAT-IAKRKSFIGTPYWMAPEVAAVERKGG  185 (267)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECcceeeeEccCc-ccccccccCcccccChhhhccccCCC
Confidence            445679999999999999999999999999975  456999999998655321 11122335678999999984   456


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccccccccc--chhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL--FKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~--~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++.++|+|||||++|+|++|..||...................+..  ...++..+.+++.+++. +|.+|+++.+++.|
T Consensus       186 ~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         186 YNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             CCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            8889999999999999999999997655433332222222222211  12467789999999886 57789999999999


Q ss_pred             Cc
Q psy5279        1103 EF 1104 (1310)
Q Consensus      1103 ~f 1104 (1310)
                      +|
T Consensus       266 ~~  267 (267)
T cd06645         266 PF  267 (267)
T ss_pred             CC
Confidence            87

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.93  E-value=1.6e-26  Score=256.15  Aligned_cols=104  Identities=25%  Similarity=0.386  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.  ...+||+|||++...............+++.|+|||.+.+. .++
T Consensus       119 ~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  196 (302)
T cd07864         119 KSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNN--KGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYG  196 (302)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCC
Confidence            445679999999999999999999999999975  45799999999876543221111222345789999988654 578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      .++|||||||++|+|++|++||...+.
T Consensus       197 ~~~Di~slG~~~~el~~g~~~~~~~~~  223 (302)
T cd07864         197 PAIDVWSCGCILGELFTKKPIFQANQE  223 (302)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCh
Confidence            899999999999999999999976554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.93  E-value=2.6e-26  Score=250.96  Aligned_cols=107  Identities=29%  Similarity=0.464  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++|++|+||||+|||++.  +..+||+|||++...............+++.|+|||.+.+. .++
T Consensus       103 ~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~--~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  180 (287)
T cd07840         103 KCYMKQLLEGLQYLHSNGILHRDIKGSNILINN--DGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYG  180 (287)
T ss_pred             HHHHHHHHHHHHHHHHCCceeccCcHHHeEEcC--CCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCC
Confidence            445779999999999999999999999999986  45699999999876543321111222346789999987654 578


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++|||||||++|+|++|..||.+.+....
T Consensus       181 ~~~Dv~slG~~l~el~t~~~p~~~~~~~~~  210 (287)
T cd07840         181 PEVDMWSVGCILAELFLGKPIFQGSTELEQ  210 (287)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            899999999999999999999987765443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0608|consensus

Probab=99.93  E-value=3.9e-26  Score=267.49  Aligned_cols=236  Identities=21%  Similarity=0.308  Sum_probs=174.1

Q ss_pred             ccchhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcccc
Q psy5279         859 ADTYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLC  936 (1310)
Q Consensus       859 ~~~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~  936 (1310)
                      +..||||-||+.  +...+++|++||+-|....+..  +.+..+..+.=+            .+..-||+|..+|+.+.+
T Consensus       654 ~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~--WVVrLyySFQDk------------dnLYFVMdYIPGGDmMSL  719 (1034)
T KOG0608|consen  654 RALYAMKTLRKADVLMRNQVAHVKAERDILAEADNE--WVVRLYYSFQDK------------DNLYFVMDYIPGGDMMSL  719 (1034)
T ss_pred             hhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCc--ceEEEEEEeccC------------CceEEEEeccCCccHHHH
Confidence            678999999955  7889999999999888766542  222222222212            222234455555555556


Q ss_pred             cccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceee---------ccC------
Q psy5279         937 YLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV---------TKL------ 1001 (1310)
Q Consensus       937 ~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~---------~~~------ 1001 (1310)
                      ++.-.|.++++++|++..+.+|+++.|.+|+|||||||+||||+.  ++++||.|||++.-+         ...      
T Consensus       720 LIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDr--dGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqD  797 (1034)
T KOG0608|consen  720 LIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQD  797 (1034)
T ss_pred             HHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEcc--CCceeeeeccccccceeccccccccCCCccccc
Confidence            666678899999999999999999999999999999999999985  678999999987321         100      


Q ss_pred             -----------Cc---------------ccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1002 -----------GT---------------LIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1002 -----------g~---------------~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                                 +.               .......||+.|+|||++...+|+..|||||.|||||+|+.|++||..++..
T Consensus       798 Smep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~  877 (1034)
T KOG0608|consen  798 SMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPG  877 (1034)
T ss_pred             cCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCC
Confidence                       00               0011236789999999999999999999999999999999999999999887


Q ss_pred             HHHhhhcccc--ccccccchhccHHHHHHHHHhccCCcchhcH---HhhhCCCcccccccc
Q psy5279        1056 ETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEVDWITL---ANNIDHEFWHVKDLK 1111 (1310)
Q Consensus      1056 e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~~rit~---~e~L~H~f~~~~~l~ 1111 (1310)
                      ++..+|..-.  ..|+ ..-.+|.+|.+||.+|.....+|..-   .++-.|+||...+..
T Consensus       878 ~tq~kv~nw~~~l~~~-~~~~ls~e~~~li~kLc~sad~RLGkng~d~vKaHpfFkgIDfs  937 (1034)
T KOG0608|consen  878 ETQYKVINWRNFLHIP-YQGNLSKEALDLIQKLCCSADSRLGKNGADQVKAHPFFKGIDFS  937 (1034)
T ss_pred             cceeeeeehhhccccc-cccccCHHHHHHHHHHhcChhhhhcccchhhhhcCccccccchH
Confidence            7755543211  1122 23579999999999988877766543   456779998876654

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.93  E-value=1.9e-26  Score=255.55  Aligned_cols=103  Identities=24%  Similarity=0.426  Sum_probs=82.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++........ ......++..|+|||.+.+..++
T Consensus       122 ~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~--~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~  199 (288)
T cd05061         122 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH--DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFT  199 (288)
T ss_pred             HHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC--CCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCC
Confidence            445779999999999999999999999999985  457999999998754321111 11122345679999999988899


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~ 1053 (1310)
                      .++|+|||||++|+|++ |..||.+.+
T Consensus       200 ~~~DvwslG~~l~el~~~~~~p~~~~~  226 (288)
T cd05061         200 TSSDMWSFGVVLWEITSLAEQPYQGLS  226 (288)
T ss_pred             hHhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            99999999999999998 788986543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.93  E-value=2e-25  Score=256.65  Aligned_cols=164  Identities=23%  Similarity=0.336  Sum_probs=134.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC-----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK-----  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-----  252 (1310)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||||++....  ......+.+|+.+|+.++||||++++++|...     
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~  100 (364)
T cd07875          21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE  100 (364)
T ss_pred             chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence            35678999999999999999999999999999999987532  23345677899999999999999999988654     


Q ss_pred             -CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         253 -DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       253 -~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                       ..+|+||||+.+ .|...+..  .+++..+..++.|++.||+|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus       101 ~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~DfG~a~~  175 (364)
T cd07875         101 FQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLART  175 (364)
T ss_pred             cCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCC--cEEEEeCCCccc
Confidence             357999999986 56565543  488899999999999999999999999999999999998655  799999999987


Q ss_pred             ecCCCCCCCcccchHHH
Q psy5279         332 ITSFGKLNPLEYDVRYV  348 (1310)
Q Consensus       332 i~~~~~l~~~~~t~~yv  348 (1310)
                      ........+..+|+.|+
T Consensus       176 ~~~~~~~~~~~~t~~y~  192 (364)
T cd07875         176 AGTSFMMTPYVVTRYYR  192 (364)
T ss_pred             cCCCCcccCCcccCCcC
Confidence            65443333444444443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.93  E-value=1.8e-25  Score=247.14  Aligned_cols=143  Identities=23%  Similarity=0.372  Sum_probs=125.2

Q ss_pred             ecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCCch
Q psy5279         191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGEL  267 (1310)
Q Consensus       191 LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GGeL  267 (1310)
                      ||+|+||.||++.++.+|+.||+|.+.....   .....+..|+++|++++||||++++++|+.+..+|+||||++||+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            7999999999999999999999999864321   1233456799999999999999999999999999999999999999


Q ss_pred             HHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         268 LHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       268 ~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ...+....  .+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||++......
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~--~~~l~Dfg~~~~~~~~  148 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQG--NCRLSDLGLAVELKDG  148 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCC--CEEEeeceeeeecCCC
Confidence            88775433  488888999999999999999999999999999999998655  7999999999876543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG4250|consensus

Probab=99.93  E-value=2.5e-26  Score=274.90  Aligned_cols=167  Identities=26%  Similarity=0.422  Sum_probs=145.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC------eE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD------SF  255 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~------~l  255 (1310)
                      ..+...+.||+|+||.||+++++.||+.||||.++... ...++...+|++||++|+|||||++.++=++..      .-
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~   92 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP   92 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence            34667889999999999999999999999999987643 345667789999999999999999999876654      35


Q ss_pred             EEEEecCCCCchHHHhhhc---CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeec--CCCCeEEEEeeccce
Q psy5279         256 TIISELAGGGELLHSLTRQ---SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH--PGGRHLLLTDFGLSR  330 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~---~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~--~~~~~VKLsDFGLAr  330 (1310)
                      .+|||||.||+|...+.+.   ..++|.+...++..++.||.|||++||+||||||+||++-.  +|...-||+|||.||
T Consensus        93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar  172 (732)
T KOG4250|consen   93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR  172 (732)
T ss_pred             eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence            7999999999999999754   35999999999999999999999999999999999999853  233356999999999


Q ss_pred             eecCCCCCCCcccchHHHh
Q psy5279         331 RITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~  349 (1310)
                      .++..+..+++.||+.|.+
T Consensus       173 el~d~s~~~S~vGT~~YLh  191 (732)
T KOG4250|consen  173 ELDDNSLFTSLVGTEEYLH  191 (732)
T ss_pred             cCCCCCeeeeecCchhhcC
Confidence            9999988899999988864

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.3e-25  Score=243.34  Aligned_cols=150  Identities=26%  Similarity=0.463  Sum_probs=134.9

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-----chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-----QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-----~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      +.|++.+.||+|+||.||+|.+..+++.||+|.+.....     .....+.+|+.++++++||||+++++++..++.+|+
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            458899999999999999999999999999999864321     123457889999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ||||++|++|.+.+...+.+++..+..++.|++.||.|||+.||+||||||+|||++.++  .+||+|||+++....
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~--~~~l~dfg~~~~~~~  156 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAG--NVKLGDFGASKRLQT  156 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CEEEeecccceeccc
Confidence            999999999999988777899999999999999999999999999999999999998654  799999999987643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.93  E-value=1.4e-26  Score=254.70  Aligned_cols=100  Identities=27%  Similarity=0.452  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++|++||||||+|||++.  +..+||+|||++........  .....+++.|+|||++.+..++.
T Consensus        98 ~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~--~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~  173 (277)
T cd05577          98 IFYAAQIICGLEHLHQRRIVYRDLKPENVLLDD--HGNVRISDLGLAVELKGGKK--IKGRAGTPGYMAPEVLQGEVYDF  173 (277)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEEccCcchhhhccCCc--cccccCCCCcCCHHHhcCCCCCc
Confidence            445679999999999999999999999999975  45699999998865432111  12234567899999998888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|+|||||++|+|++|..||.+.
T Consensus       174 ~~Di~slG~il~~l~~g~~p~~~~  197 (277)
T cd05577         174 SVDWFALGCTLYEMIAGRSPFRQR  197 (277)
T ss_pred             hhhhHHHHHHHHHHhhCCCCCCCC
Confidence            999999999999999999999654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0577|consensus

Probab=99.93  E-value=7.4e-27  Score=272.10  Aligned_cols=218  Identities=23%  Similarity=0.362  Sum_probs=176.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcch---HHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY---KSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~---~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ..|.-+++||.|+||.||-|++..+.+.||||.++-...+.   -..+..||..|++|.|||+|.+.++|..+...+|||
T Consensus        26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM  105 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM  105 (948)
T ss_pred             HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence            34566789999999999999999999999999997543332   234778999999999999999999999999999999


Q ss_pred             ecCCCC--chHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         260 ELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       260 Ey~~GG--eL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      |||-|.  +|.+...  ..+.|.+++.++.+.+.||.|||+++.||||||..|||+++++  .|||+|||-|..+.+   
T Consensus       106 EYClGSAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g--~VKLaDFGSAsi~~P---  178 (948)
T KOG0577|consen  106 EYCLGSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPG--LVKLADFGSASIMAP---  178 (948)
T ss_pred             HHHhccHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCC--eeeeccccchhhcCc---
Confidence            999986  5555543  4699999999999999999999999999999999999998766  899999999987755   


Q ss_pred             CCCcccchHHHhh------------------hcCCCccccCCCCCCCCCCCcchhhhhhhcccc----------------
Q psy5279         338 LNPLEYDVRYVRQ------------------ALRHPWLNFADRKPTEDTPKLNTDALRNYYNLY----------------  383 (1310)
Q Consensus       338 l~~~~~t~~yv~~------------------~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~----------------  383 (1310)
                      .++++|||-++++                  +++-..+.++.++|    |.|++.+++.+|.++                
T Consensus       179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkP----PlFnMNAMSALYHIAQNesPtLqs~eWS~~F  254 (948)
T KOG0577|consen  179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP----PLFNMNAMSALYHIAQNESPTLQSNEWSDYF  254 (948)
T ss_pred             hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCC----CccCchHHHHHHHHHhcCCCCCCCchhHHHH
Confidence            4668888877663                  12334455556655    777888888777555                


Q ss_pred             hhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         384 KDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       384 ~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ..|+..++-+-.-.|+|...||.|++..
T Consensus       255 ~~Fvd~CLqKipqeRptse~ll~H~fv~  282 (948)
T KOG0577|consen  255 RNFVDSCLQKIPQERPTSEELLKHRFVL  282 (948)
T ss_pred             HHHHHHHHhhCcccCCcHHHHhhcchhc
Confidence            1234445555567888899999999964

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.93  E-value=2.8e-25  Score=245.10  Aligned_cols=217  Identities=20%  Similarity=0.309  Sum_probs=162.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecC
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA  262 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~  262 (1310)
                      .|++.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.+|++++||||+++++.|...+..++||||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            5788899999999999999999999999999986542 233456889999999999999999999999999999999999


Q ss_pred             CCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCCCcc
Q psy5279         263 GGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE  342 (1310)
Q Consensus       263 ~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~~~~  342 (1310)
                      ++|+|...    ..+++..+..++.|++.||+|||++||+|+||||+|||++.++  .+||+|||++..+... ..+..+
T Consensus        82 ~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~--~~~l~dfg~~~~~~~~-~~~~~~  154 (279)
T cd06619          82 DGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRG--QVKLCDFGVSTQLVNS-IAKTYV  154 (279)
T ss_pred             CCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCC--CEEEeeCCcceecccc-cccCCC
Confidence            99988643    3478899999999999999999999999999999999998755  7999999999876432 222234


Q ss_pred             cchHHHhhh-------------------------cCCCccccCCCCCCCCCCCcchhhh-------------hhhcccch
Q psy5279         343 YDVRYVRQA-------------------------LRHPWLNFADRKPTEDTPKLNTDAL-------------RNYYNLYK  384 (1310)
Q Consensus       343 ~t~~yv~~~-------------------------~r~P~l~~~~~~~~~~~p~~~~~~~-------------~~~~~~~~  384 (1310)
                      +++.|+++.                         +..||..+........ +   ....             ..+...+.
T Consensus       155 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~  230 (279)
T cd06619         155 GTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM-P---LQLLQCIVDEDPPVLPVGQFSEKFV  230 (279)
T ss_pred             CChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccc-h---HHHHHHHhccCCCCCCCCcCCHHHH
Confidence            444443321                         2334322111100000 0   0000             01122345


Q ss_pred             hhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         385 DWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       385 D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      |.+...+..+...|+++.+.+.|||+.
T Consensus       231 ~li~~~l~~~P~~Rp~~~eil~~~~~~  257 (279)
T cd06619         231 HFITQCMRKQPKERPAPENLMDHPFIV  257 (279)
T ss_pred             HHHHHHhhCChhhCCCHHHHhcCcccc
Confidence            566666667788999999999999974

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.93  E-value=1.5e-25  Score=260.15  Aligned_cols=151  Identities=17%  Similarity=0.271  Sum_probs=112.8

Q ss_pred             hHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccc-ccCCCCCCcccccccccCCC
Q psy5279         947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI-HPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       947 ~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~-~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ....++.||+.||.|||++||+||||||+|||++.  ...+||+|||+++......... .....+++.|+|||++.+..
T Consensus       215 ~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  292 (375)
T cd05104         215 DLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCV  292 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEEC--CCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCC
Confidence            35567789999999999999999999999999975  4569999999987654322211 11122346799999999999


Q ss_pred             CCCccchhHHHHHHHHHhc-CCCCCCCCChhH-HHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLS-GASPFRGQSEPE-TRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e-~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++.++|||||||++|+|++ |..||.+..... ..+.+.. ..... .....+.++++++..|+. ++.+|+++.+++.
T Consensus       293 ~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~  369 (375)
T cd05104         293 YTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKE-GYRML-SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQ  369 (375)
T ss_pred             CCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHh-CccCC-CCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            9999999999999999997 999998765433 2222222 12111 123467889999999886 5667988888764

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.93  E-value=1.5e-26  Score=254.63  Aligned_cols=99  Identities=29%  Similarity=0.494  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.|+.|||++|++|+||||+||+++.  ++.++|+|||++....... .......++..|+|||.+.+..++.+
T Consensus       105 ~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~--~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~  181 (277)
T cd06641         105 TILREILKGLDYLHSEKKIHRDIKAANVLLSE--HGEVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIKQSAYDSK  181 (277)
T ss_pred             HHHHHHHHHHHHHccCCeecCCCCHHhEEECC--CCCEEEeecccceecccch-hhhccccCCccccChhhhccCCCCch
Confidence            45679999999999999999999999999975  4569999999987653321 11122346688999999988888899


Q ss_pred             cchhHHHHHHHHHhcCCCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      +|+||+||++|+|++|..||..
T Consensus       182 ~Dv~slG~~l~~l~~g~~p~~~  203 (277)
T cd06641         182 ADIWSLGITAIELAKGEPPHSE  203 (277)
T ss_pred             hhHHHHHHHHHHHHcCCCCCCc
Confidence            9999999999999999999964

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.93  E-value=3e-26  Score=246.82  Aligned_cols=154  Identities=21%  Similarity=0.269  Sum_probs=118.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||+.||+|+||+|+||+++.  +..+||+|||++........ ......+++.|+|||++.+..++.
T Consensus       102 ~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~--~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~  178 (256)
T cd06612         102 AAILYQTLKGLEYLHSNKKIHRDIKAGNILLNE--EGQAKLADFGVSGQLTDTMA-KRNTVIGTPFWMAPEVIQEIGYNN  178 (256)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCcceEEECC--CCcEEEcccccchhcccCcc-ccccccCCccccCHHHHhcCCCCc
Confidence            345679999999999999999999999999986  45699999999876543221 122334678899999999989999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFW 1105 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~ 1105 (1310)
                      ++|+|||||++|+|++|..||...+.......+.............++.++.+++.+|+. +|.+|+++.+++.|+|+
T Consensus       179 ~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         179 KADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            999999999999999999999876554433332221111111123467889999999886 67789999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.93  E-value=1.6e-25  Score=248.73  Aligned_cols=148  Identities=28%  Similarity=0.451  Sum_probs=130.9

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      |++.+.||+|+||.||+|.++.+++.||+|.+.....   .....+.+|+.+|+.++||||+.+++.+.+.+.+++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            6788899999999999999999999999999865422   2234567899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++||+|.+.+...  ..+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||++.....
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~--~~~l~Dfg~~~~~~~  154 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPE  154 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEeeccceeecCC
Confidence            9999998887543  3589999999999999999999999999999999999998655  799999999987644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.93  E-value=1e-25  Score=275.79  Aligned_cols=100  Identities=24%  Similarity=0.329  Sum_probs=77.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC---
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP--- 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~--- 1025 (1310)
                      ..++.||+.||.|||++||+||||||+|||++. ....+||+|||+|+.+............++|.|||||.+....   
T Consensus       258 ~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~-~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~  336 (566)
T PLN03225        258 QTIMRQILFALDGLHSTGIVHRDVKPQNIIFSE-GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTP  336 (566)
T ss_pred             HHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeC-CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCC
Confidence            456789999999999999999999999999974 2356999999999765432222233446789999999764322   


Q ss_pred             -------------------CCCccchhHHHHHHHHHhcCCCCC
Q psy5279        1026 -------------------IFPQTDVWSAGVLAYVLLSGASPF 1049 (1310)
Q Consensus      1026 -------------------ys~ksDIWSLGViLyeLLtG~~PF 1049 (1310)
                                         ++.++|||||||++|+|+++..|+
T Consensus       337 ~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~  379 (566)
T PLN03225        337 SAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRS  379 (566)
T ss_pred             CCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCC
Confidence                               334569999999999999876654

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.93  E-value=2.8e-26  Score=266.44  Aligned_cols=150  Identities=18%  Similarity=0.270  Sum_probs=112.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++........ ......+++.|||||++.+..+
T Consensus       214 ~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~--~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  291 (374)
T cd05106         214 LLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTD--GRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVY  291 (374)
T ss_pred             HHHHHHHHHHHHHHHHHCCEEeccCchheEEEeC--CCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCC
Confidence            4567889999999999999999999999999985  457999999998765322211 1111223467999999998899


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +.++|||||||++|+|++ |..||...........+....+... ....++++.++++.+++. ++.+|+++.+++
T Consensus       292 ~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~  366 (374)
T cd05106         292 TVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMS-RPDFAPPEIYSIMKMCWNLEPTERPTFSQIS  366 (374)
T ss_pred             CccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCcc-CCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            999999999999999997 9999987654433222222222111 123468899999999887 567898888765

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.93  E-value=3.9e-26  Score=260.72  Aligned_cols=100  Identities=26%  Similarity=0.506  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.|++.||.|||++||+||||||+|||++.  ++.+||+|||+++......    ....+++.|+|||++.+ ..++
T Consensus       120 ~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~--~~~~kL~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~  193 (342)
T cd07879         120 QYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNE--DCELKILDFGLARHADAEM----TGYVVTRWYRAPEVILNWMHYN  193 (342)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEeeCCCCcCCCCCC----CCceeeecccChhhhcCccccC
Confidence            445779999999999999999999999999986  4679999999986542211    12245688999999876 4588


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      .++|+|||||++|+|++|+.||.+.+.
T Consensus       194 ~~~Dv~slGvil~el~~g~~pf~~~~~  220 (342)
T cd07879         194 QTVDIWSVGCIMAEMLTGKTLFKGKDY  220 (342)
T ss_pred             chHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            899999999999999999999987654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.93  E-value=3.1e-26  Score=259.43  Aligned_cols=105  Identities=25%  Similarity=0.412  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccc------ccCCCCCCcccccccccC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI------HPINTPNPEFAAPEVLAE 1023 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~------~~~~tGtp~Y~APEvl~~ 1023 (1310)
                      .++.||+.||+|||++||+||||||+|||++.  ...+|++|||.+......+...      .....++..|+|||++.+
T Consensus       105 ~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  182 (328)
T cd08226         105 NILFGALRGLNYLHQNGYIHRNIKASHILISG--DGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQ  182 (328)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEEeC--CCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcC
Confidence            45679999999999999999999999999985  4569999998543221111100      011233467999999976


Q ss_pred             C--CCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1024 E--PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1024 ~--~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .  .++.++|+|||||++|+|++|.+||.+.....
T Consensus       183 ~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~  217 (328)
T cd08226         183 DLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ  217 (328)
T ss_pred             CCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH
Confidence            4  47889999999999999999999998765433

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.93  E-value=4.6e-26  Score=248.86  Aligned_cols=100  Identities=24%  Similarity=0.481  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC-cccccCCCCCCcccccccccCCC--C
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-TLIHPINTPNPEFAAPEVLAEEP--I 1026 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g-~~~~~~~tGtp~Y~APEvl~~~~--y 1026 (1310)
                      .++.||+.||.|||++|++|+||||+||+++.  +..+||+|||++....... ........++..|+|||.+....  +
T Consensus       112 ~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~--~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  189 (272)
T cd06629         112 FFTEQVLEGLAYLHSKGILHRDLKADNLLVDA--DGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGY  189 (272)
T ss_pred             HHHHHHHHHHHHHhhCCeeecCCChhhEEEcC--CCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCC
Confidence            34569999999999999999999999999975  5679999999986543211 11112234668899999987654  7


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      +.++|+|||||++|+|++|..||..
T Consensus       190 ~~~~Dv~slG~~l~~l~~g~~p~~~  214 (272)
T cd06629         190 SAKVDIWSLGCVVLEMFAGRRPWSD  214 (272)
T ss_pred             CccchhHHHHHHHHHHHhCCCCCcC
Confidence            8899999999999999999999954

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.93  E-value=1.1e-25  Score=249.59  Aligned_cols=150  Identities=29%  Similarity=0.510  Sum_probs=136.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|.+.+.||+|+||.||++.+..+++.||+|++....   ....+.+.+|+++|++++||||+++++++...+.+|+||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            46899999999999999999999999999999986532   233456789999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ||+++|+|.+.+...+.+++..+..++.||+.||.|||++||+||||||.|||++.++  .+||+|||+++....
T Consensus        81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~--~~kl~dfg~~~~~~~  153 (290)
T cd05580          81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG--YIKITDFGFAKRVKG  153 (290)
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC--CEEEeeCCCccccCC
Confidence            9999999999998888899999999999999999999999999999999999998655  799999999987644

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.93  E-value=1.5e-25  Score=270.39  Aligned_cols=181  Identities=20%  Similarity=0.247  Sum_probs=130.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ...++.|++.||.|||++||+||||||+|||++.  +..+||+|||++.............+.++|.|+|||.+......
T Consensus       311 ~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~--~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~  388 (507)
T PLN03224        311 IKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTV--DGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSC  388 (507)
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCCCchHhEEECC--CCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCC
Confidence            3456789999999999999999999999999985  45699999999865533222223344567999999998766555


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccc
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      ..++.|+++.++.....+                                                              
T Consensus       389 ~~~~~~~~~~~l~~~~~~--------------------------------------------------------------  406 (507)
T PLN03224        389 PRAPAPAMAALLSPFAWL--------------------------------------------------------------  406 (507)
T ss_pred             CccchhhhhhhhhhhHHh--------------------------------------------------------------
Confidence            556655544332221100                                                              


Q ss_pred             cccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCC-CCCCCChh----
Q psy5279        1108 KDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS-PFRGQSEP---- 1182 (1310)
Q Consensus      1108 ~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~-PF~g~~~~---- 1182 (1310)
                                                                 -.....+||||+|||+|+|++|.. ||.+...-    
T Consensus       407 -------------------------------------------yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~  443 (507)
T PLN03224        407 -------------------------------------------YGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTEL  443 (507)
T ss_pred             -------------------------------------------cCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHH
Confidence                                                       001123799999999999999985 88642111    


Q ss_pred             -------hhhhcccccccccccchhccCHHHHHHHHHhhhcCC---CCCCCHHHhhcCCccCCc
Q psy5279        1183 -------ETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAP---GKRPTVEECHENRWLVPS 1236 (1310)
Q Consensus      1183 -------e~~~~I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP---~kRpTa~e~L~HpWl~~~ 1236 (1310)
                             .....+....++|+ .|+.+|++++|||.+||.++|   ++|+||+|+|+||||.+.
T Consensus       444 ~~~~~~~~~~r~~~~~~~~~~-~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~~  506 (507)
T PLN03224        444 RQYDNDLNRWRMYKGQKYDFS-LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLPE  506 (507)
T ss_pred             hhccchHHHHHhhcccCCCcc-cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCCC
Confidence                   11122334556665 478899999999999999877   789999999999999753

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.93  E-value=2.5e-25  Score=249.57  Aligned_cols=144  Identities=25%  Similarity=0.444  Sum_probs=119.4

Q ss_pred             eceecccCceEEEEEEEc--CCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEe--CCeEEEEEecCC
Q psy5279         188 GDELGRGVTGIVYHAVER--SSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYET--KDSFTIISELAG  263 (1310)
Q Consensus       188 ~~~LG~GsFG~Vyka~~k--~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~--~~~lyLVmEy~~  263 (1310)
                      .++||+|+||.||+|.++  .+++.||+|.+....  ....+.+|+.+|+.++|||||+++++|..  ...+|+||||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            468999999999999976  467899999986542  23456789999999999999999999854  457899999987


Q ss_pred             CCchHHHhhh---------cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC--CCCeEEEEeeccceee
Q psy5279         264 GGELLHSLTR---------QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP--GGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       264 GGeL~~~l~~---------~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~--~~~~VKLsDFGLAr~i  332 (1310)
                      + +|.+.+..         ...+++..++.++.||+.||+|||++||+||||||+|||+..+  ....+||+|||+|+.+
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07868          84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence            5 67666532         1248899999999999999999999999999999999999532  2347999999999876


Q ss_pred             cC
Q psy5279         333 TS  334 (1310)
Q Consensus       333 ~~  334 (1310)
                      ..
T Consensus       163 ~~  164 (317)
T cd07868         163 NS  164 (317)
T ss_pred             CC
Confidence            43

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.93  E-value=8.6e-26  Score=252.89  Aligned_cols=98  Identities=30%  Similarity=0.436  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc---CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA---EEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~---~~~ 1025 (1310)
                      ..++.||+.||.|||++||+||||+|+||+++.  +..+||+|||++.......     ...+++.|+|||++.   ...
T Consensus       118 ~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~--~~~~kL~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~  190 (307)
T cd06607         118 AAICHGALQGLAYLHSHERIHRDIKAGNILLTE--PGTVKLADFGSASLVSPAN-----SFVGTPYWMAPEVILAMDEGQ  190 (307)
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCcccEEECC--CCCEEEeecCcceecCCCC-----CccCCccccCceeeeccCCCC
Confidence            345779999999999999999999999999975  4579999999886543221     234568899999984   356


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++.++|||||||++|+|++|..||.+.+
T Consensus       191 ~~~~sDv~s~G~il~el~tg~~p~~~~~  218 (307)
T cd06607         191 YDGKVDVWSLGITCIELAERKPPLFNMN  218 (307)
T ss_pred             CCcccchHHHHHHHHHHHcCCCCCCCcc
Confidence            7889999999999999999999997653

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.93  E-value=3.6e-25  Score=242.70  Aligned_cols=151  Identities=25%  Similarity=0.395  Sum_probs=135.0

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|++.+.||+|+||.||+|.++.+|+.||+|++....  ....+.+.+|+.++++++||||+++++++.....+++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            47899999999999999999999999999999886432  2234567899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |++++.|.........+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||++..+...
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~  153 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG--QIKLCDFGFARILTGP  153 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC--cEEECccccceecCCC
Confidence            999988887776666799999999999999999999999999999999999998655  7999999999876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG1187|consensus

Probab=99.93  E-value=1.4e-25  Score=261.09  Aligned_cols=169  Identities=22%  Similarity=0.283  Sum_probs=138.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-eEEEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-SFTIIS  259 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-~lyLVm  259 (1310)
                      .++.|.-...||+|+||.||+|.... |+.||||.+.....+....|.+|+.+|.+++|||+|+|+++|.+.+ ..+||+
T Consensus        73 AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVY  151 (361)
T KOG1187|consen   73 ATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVY  151 (361)
T ss_pred             HHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEE
Confidence            34666777899999999999998654 4899999887654331344999999999999999999999999999 599999


Q ss_pred             ecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCC---eeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         260 ELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLS---IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~g---IVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||++|+|.+++....  .++...-..|+.+++.||+|||...   ||||||||+|||||++  ...||+|||||+....
T Consensus       152 Eym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~--~~aKlsDFGLa~~~~~  229 (361)
T KOG1187|consen  152 EYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDED--FNAKLSDFGLAKLGPE  229 (361)
T ss_pred             EccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCC--CCEEccCccCcccCCc
Confidence            9999999999997654  6888888899999999999999754   9999999999999854  4899999999976644


Q ss_pred             -CCCCCCc-ccchHHHhhhc
Q psy5279         335 -FGKLNPL-EYDVRYVRQAL  352 (1310)
Q Consensus       335 -~~~l~~~-~~t~~yv~~~~  352 (1310)
                       .....+. .||..|+++.|
T Consensus       230 ~~~~~~~~~~gt~gY~~PEy  249 (361)
T KOG1187|consen  230 GDTSVSTTVMGTFGYLAPEY  249 (361)
T ss_pred             cccceeeecCCCCccCChhh
Confidence             3332222 66777766443

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.93  E-value=5.3e-26  Score=248.94  Aligned_cols=105  Identities=28%  Similarity=0.443  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++|++|+||||+||+++.  +..+||+|||++..........  ...+++.|+|||++.+..++.
T Consensus       110 ~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~--~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~PE~~~~~~~~~  185 (287)
T cd07838         110 KDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTS--DGQVKIADFGLARIYSFEMALT--SVVVTLWYRAPEVLLQSSYAT  185 (287)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeccCChhhEEEcc--CCCEEEeccCcceeccCCcccc--cccccccccChHHhccCCCCC
Confidence            345679999999999999999999999999986  3679999999987654322211  123567899999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ++|+|||||++|+|++|.+||.+.+..+.
T Consensus       186 ~~Di~s~G~~l~~l~~~~~~~~~~~~~~~  214 (287)
T cd07838         186 PVDMWSVGCIFAELFRRRPLFRGTSEADQ  214 (287)
T ss_pred             cchhhhHHHHHHHHHhCCCcccCCChHHH
Confidence            99999999999999999999988765544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=4.5e-26  Score=251.71  Aligned_cols=99  Identities=26%  Similarity=0.413  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.|++.||.|||+ +||+||||||+||+++.  +..++|+|||++.......   .....++..|+|||++.+..++.
T Consensus       107 ~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~--~~~~~l~d~gl~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~  181 (284)
T cd06620         107 KIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNS--RGQIKLCDFGVSGELINSI---ADTFVGTSTYMSPERIQGGKYTV  181 (284)
T ss_pred             HHHHHHHHHHHHHHHhcCeeccCCCHHHEEECC--CCcEEEccCCcccchhhhc---cCccccCcccCCHHHHccCCCCc
Confidence            345689999999997 69999999999999975  4679999999876542211   12335678999999998888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|+|||||++|+|++|..||....
T Consensus       182 ~~Di~slG~~l~~l~tg~~p~~~~~  206 (284)
T cd06620         182 KSDVWSLGISIIELALGKFPFAFSN  206 (284)
T ss_pred             cchHHHHHHHHHHHHhCCCCCcccc
Confidence            9999999999999999999997653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.93  E-value=3.9e-25  Score=247.15  Aligned_cols=234  Identities=24%  Similarity=0.365  Sum_probs=174.0

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ....+|.+.+.||+|+||.||+|.+..+|+.||+|.+........+.+.+|+.+|+.++||||++++++|...+.+|+||
T Consensus        16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   95 (297)
T cd06656          16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   95 (297)
T ss_pred             ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence            45688999999999999999999999999999999997655455567889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC-C
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK-L  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~-l  338 (1310)
                      ||++|++|.+.+.. ..+++.++..++.|++.||.|||+.||+||||||+|||++.++  .+||+|||+++....... .
T Consensus        96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~--~~~l~Dfg~~~~~~~~~~~~  172 (297)
T cd06656          96 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKR  172 (297)
T ss_pred             cccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEECcCccceEccCCccCc
Confidence            99999999998754 4689999999999999999999999999999999999998655  799999999987643321 1


Q ss_pred             CCcccchHHHhh-------------------------hcCCCccccCCCCCCC-----CCCCcchhhhhhhcccchhhch
Q psy5279         339 NPLEYDVRYVRQ-------------------------ALRHPWLNFADRKPTE-----DTPKLNTDALRNYYNLYKDWYG  388 (1310)
Q Consensus       339 ~~~~~t~~yv~~-------------------------~~r~P~l~~~~~~~~~-----~~p~~~~~~~~~~~~~~~D~~~  388 (1310)
                      ....+++.|+++                         .+..||..........     ..+..  .....+...+.|++.
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~  250 (297)
T cd06656         173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPEL--QNPERLSAVFRDFLN  250 (297)
T ss_pred             CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCC--CCccccCHHHHHHHH
Confidence            112223222221                         2333442211100000     00000  001122333466666


Q ss_pred             hhhhhhcccCCCCCCccCCCcceecCCCCC
Q psy5279         389 NAAVRRYYRRRPLNSCYTHPSRMIYPPGTQ  418 (1310)
Q Consensus       389 ~~~l~~~~~r~~~~~cl~hpw~~~~~~~~~  418 (1310)
                      ..+-.+...|+++.+++.|||.....+-..
T Consensus       251 ~~l~~~p~~Rps~~~il~~~~~~~~~~~~~  280 (297)
T cd06656         251 RCLEMDVDRRGSAKELLQHPFLKLAKPLSS  280 (297)
T ss_pred             HHccCChhhCcCHHHHhcCchhcccccccc
Confidence            666667888999999999999754444333

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.93  E-value=3.1e-26  Score=256.25  Aligned_cols=157  Identities=23%  Similarity=0.381  Sum_probs=121.6

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccC--------------CcccccCCCCCCccc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL--------------GTLIHPINTPNPEFA 1016 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~--------------g~~~~~~~tGtp~Y~ 1016 (1310)
                      ++.|++.||.|||++||+||||||+|||++.  .+.+||+|||+++.....              .........+++.|+
T Consensus       106 ~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~  183 (305)
T cd05609         106 YFAETVLALEYLHNYGIVHRDLKPDNLLITS--MGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYI  183 (305)
T ss_pred             HHHHHHHHHHHHHHCCccccCCchHHEEECC--CCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCcccc
Confidence            4569999999999999999999999999975  557999999987531100              000111224567899


Q ss_pred             ccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccC-Ccchhc
Q psy5279        1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKH-EVDWIT 1095 (1310)
Q Consensus      1017 APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~-~~~rit 1095 (1310)
                      |||.+.+..++.++|+|||||++|+|++|..||.+.+..+....+.......+.....++++.++++.+|+.. |.+|++
T Consensus       184 aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~  263 (305)
T cd05609         184 APEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLG  263 (305)
T ss_pred             CchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccC
Confidence            9999998889999999999999999999999999888777766665544444433346788999999998874 556776


Q ss_pred             ---HHhhhCCCcccccc
Q psy5279        1096 ---LANNIDHEFWHVKD 1109 (1310)
Q Consensus      1096 ---~~e~L~H~f~~~~~ 1109 (1310)
                         +.+.+.|+||...+
T Consensus       264 ~~~~~~ll~~~~~~~~~  280 (305)
T cd05609         264 TGGAFEVKQHRFFLGLD  280 (305)
T ss_pred             ccCHHHHHhCccccCCC
Confidence               68889999986533

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.93  E-value=8e-26  Score=256.67  Aligned_cols=106  Identities=26%  Similarity=0.477  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc----ccccCCCCCCcccccccccC-C
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT----LIHPINTPNPEFAAPEVLAE-E 1024 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~----~~~~~~tGtp~Y~APEvl~~-~ 1024 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++........    .......+++.|+|||++.+ .
T Consensus       111 ~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~--~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  188 (337)
T cd07852         111 YIMYQLLKALKYIHSGNVIHRDLKPSNILLNS--DCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGST  188 (337)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccc
Confidence            45679999999999999999999999999986  56799999999875533221    11122346789999998865 4


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++.++|+|||||++|+|++|..||.+....+.
T Consensus       189 ~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~  221 (337)
T cd07852         189 RYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ  221 (337)
T ss_pred             cccccchHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            578899999999999999999999987665443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=4.7e-26  Score=255.30  Aligned_cols=155  Identities=23%  Similarity=0.374  Sum_probs=122.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-------------------------
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL------------------------- 1004 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~------------------------- 1004 (1310)
                      .++.||+.||.|||++|++|+||||+||+++.  ++.++|+|||++.........                         
T Consensus       107 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (316)
T cd05574         107 FYAAEVLLALEYLHLLGIVYRDLKPENILLHE--SGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEE  184 (316)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCChHHeEEcC--CCCEEEeecchhhcccccccccccccccccccccccccchhhhccc
Confidence            35679999999999999999999999999986  456999999987643221110                         


Q ss_pred             ---cccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHH
Q psy5279        1005 ---IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATR 1081 (1310)
Q Consensus      1005 ---~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakd 1081 (1310)
                         ......|+..|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+......++.. ..+++++++
T Consensus       185 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  263 (316)
T cd05574         185 PSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGS-PPVSSSARD  263 (316)
T ss_pred             ccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCc-cccCHHHHH
Confidence               0011246788999999999889999999999999999999999999887776666555444444322 237899999


Q ss_pred             HHHHhcc-CCcchhc----HHhhhCCCcccc
Q psy5279        1082 FLMLIFK-HEVDWIT----LANNIDHEFWHV 1107 (1310)
Q Consensus      1082 LL~~il~-~~~~rit----~~e~L~H~f~~~ 1107 (1310)
                      ++.+|+. ++.+|++    +.+++.|+|+..
T Consensus       264 li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~  294 (316)
T cd05574         264 LIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG  294 (316)
T ss_pred             HHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence            9999886 5677999    999999998763

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.93  E-value=4.4e-25  Score=241.19  Aligned_cols=148  Identities=26%  Similarity=0.444  Sum_probs=132.5

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---c-------hHHHHHHHHHHHHhcCCCCcceEEEEEEeCC
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---Q-------YKSLFKNELDIMNQLCHRNLVRLHDSYETKD  253 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~-------~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~  253 (1310)
                      +|.+.+.||+|+||.||+|.+..+|+.||+|.+.....   .       ..+.+.+|+.+|+.++||||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            57888999999999999999999999999998853211   1       1245778999999999999999999999999


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .+++||||+.||+|.+.+...+.+++..++.++.||+.||.|||++|++||||||+||+++.++  .+||+|||+++...
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~--~~~l~d~~~~~~~~  159 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADG--ICKISDFGISKKSD  159 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCC--eEEEeecccccccc
Confidence            9999999999999999998877899999999999999999999999999999999999998654  89999999998653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.93  E-value=2.4e-25  Score=247.02  Aligned_cols=148  Identities=28%  Similarity=0.453  Sum_probs=130.9

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      |+..+.||+|+||+||+|.+..+++.||+|.+.....   .....+.+|+.+|+.++||||+.+++.|..++.+++||||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            6778899999999999999999999999999865422   2234567899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +.+|+|...+...  ..+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~--~~kl~Dfg~~~~~~~  154 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYG--HIRISDLGLAVKIPE  154 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCC--CEEEecCCcceecCC
Confidence            9999998777543  3599999999999999999999999999999999999998654  799999999987643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0201|consensus

Probab=99.93  E-value=1.1e-26  Score=266.24  Aligned_cols=229  Identities=22%  Similarity=0.308  Sum_probs=190.0

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ...|...+.||+|+||.||+|.+..|++.||+|++..... ...+.+.+|+.+|.++++|||.++|+.|..+..++++||
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe   91 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME   91 (467)
T ss_pred             ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence            3456677999999999999999999999999999986543 345678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC-C
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL-N  339 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l-~  339 (1310)
                      ||.||++.+.+.....+.|.++..++++++.||.|||+++.+|||||+.|||+..++  .|||+|||+|-.+...... +
T Consensus        92 y~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g--~vkl~DfgVa~ql~~~~~rr~  169 (467)
T KOG0201|consen   92 YCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG--DVKLADFGVAGQLTNTVKRRK  169 (467)
T ss_pred             HhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC--cEEEEecceeeeeechhhccc
Confidence            999999999998777779999999999999999999999999999999999998765  7999999999988765433 7


Q ss_pred             CcccchHHHhhh----------------------cCCCccccCCCCC---CCCCCCcchhhhhhhcc-cchhhchhhhhh
Q psy5279         340 PLEYDVRYVRQA----------------------LRHPWLNFADRKP---TEDTPKLNTDALRNYYN-LYKDWYGNAAVR  393 (1310)
Q Consensus       340 ~~~~t~~yv~~~----------------------~r~P~l~~~~~~~---~~~~p~~~~~~~~~~~~-~~~D~~~~~~l~  393 (1310)
                      +++|||-|+++.                      +...+.++.+..|   .+..|...+-.+.+.|+ .++||++.++-+
T Consensus       170 tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k  249 (467)
T KOG0201|consen  170 TFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDK  249 (467)
T ss_pred             cccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhc
Confidence            889998776642                      1112222233332   34455556666655555 479999999999


Q ss_pred             hcccCCCCCCccCCCccee
Q psy5279         394 RYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       394 ~~~~r~~~~~cl~hpw~~~  412 (1310)
                      ....|+++.+.|.|+++..
T Consensus       250 ~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  250 NPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             CcccCcCHHHHhhhHHHHh
Confidence            9999999999999999743

>KOG0197|consensus

Probab=99.93  E-value=1.5e-25  Score=262.74  Aligned_cols=146  Identities=25%  Similarity=0.367  Sum_probs=129.4

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.+.+.||+|.||.|+.|....+ ..||+|.++... ...+.|.+|++||++|+|+|||+|+++|..++.+|||||||+.
T Consensus       208 l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~  285 (468)
T KOG0197|consen  208 LKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK  285 (468)
T ss_pred             HHHHHHhcCCccceEEEEEEcCC-CcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence            45678899999999999987643 368999987543 3456688999999999999999999999999999999999999


Q ss_pred             CchHHHhhh--cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         265 GELLHSLTR--QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       265 GeL~~~l~~--~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+|.+++..  ...+.-.+...++.|||+||+||+++++|||||...|||++++.  .+||+||||||.+..
T Consensus       286 GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~--~vKIsDFGLAr~~~d  355 (468)
T KOG0197|consen  286 GSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDL--VVKISDFGLARLIGD  355 (468)
T ss_pred             CcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCc--eEEEcccccccccCC
Confidence            999999986  34588899999999999999999999999999999999998655  899999999995544

>KOG0589|consensus

Probab=99.93  E-value=3.6e-26  Score=266.86  Aligned_cols=167  Identities=23%  Similarity=0.406  Sum_probs=150.9

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe-EEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS-FTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~-lyLV  258 (1310)
                      .+.|+.++.+|+|+||.++.++++..++.|++|.|....  ...+....+|+.+++++.|||||.+++.|..++. ++||
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv   82 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV   82 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence            367999999999999999999999999999999997543  3455678899999999999999999999999988 9999


Q ss_pred             EecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         259 SELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |+||+||+|.+.+....  .|+|..+..++.|++.||+|||+++|+|||||+.||+++.++  .|||.|||+||.+.+..
T Consensus        83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~--~VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen   83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDK--KVKLGDFGLAKILNPED  160 (426)
T ss_pred             EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccC--ceeecchhhhhhcCCch
Confidence            99999999999997554  599999999999999999999999999999999999998766  68999999999998776


Q ss_pred             -CCCCcccchHHHhh
Q psy5279         337 -KLNPLEYDVRYVRQ  350 (1310)
Q Consensus       337 -~l~~~~~t~~yv~~  350 (1310)
                       ...+..|||.|+-+
T Consensus       161 ~~a~tvvGTp~YmcP  175 (426)
T KOG0589|consen  161 SLASTVVGTPYYMCP  175 (426)
T ss_pred             hhhheecCCCcccCH
Confidence             67788999988754

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.93  E-value=1.6e-25  Score=243.08  Aligned_cols=100  Identities=24%  Similarity=0.450  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++|++|+||||+||+++.   ..+||+|||++........ ......+++.|+|||.+.+..++.
T Consensus       109 ~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~---~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~  184 (260)
T cd08222         109 CEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN---NLLKIGDFGVSRLLMGSCD-LATTFTGTPYYMSPEALKHQGYDS  184 (260)
T ss_pred             HHHHHHHHHHHHHHHHcCccccCCChhheEeec---CCEeecccCceeecCCCcc-cccCCCCCcCccCHHHHccCCCCc
Confidence            445679999999999999999999999999974   4599999998876532221 122335678999999998888899


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|+||||+++|+|++|..||.+.
T Consensus       185 ~~Dv~slG~~~~~l~~~~~~~~~~  208 (260)
T cd08222         185 KSDIWSLGCILYEMCCLAHAFEGQ  208 (260)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCc
Confidence            999999999999999999999654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0614|consensus

Probab=99.93  E-value=4.6e-26  Score=262.80  Aligned_cols=225  Identities=21%  Similarity=0.343  Sum_probs=175.3

Q ss_pred             chhhhhhhcc--cCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCcccccc
Q psy5279         861 TYTLRRLRHE--IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYL  938 (1310)
Q Consensus       861 ~~~~~~l~~e--~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L  938 (1310)
                      +||+|+||+.  ..+++..|+-+|+.|+..+.  .+|+...+-|+.=.  .           -..++..-+.|+.+..+|
T Consensus       447 ~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~--s~fIvrLYrTfrd~--k-----------yvYmLmEaClGGElWTiL  511 (732)
T KOG0614|consen  447 TFALKILKKKHIVDTKQQEHVFSERNIMMECR--SDFIVRLYRTFRDS--K-----------YVYMLMEACLGGELWTIL  511 (732)
T ss_pred             HHHHHHHhHhhccchhHHHHHHhHHHHHHhcC--chHHHHHHHHhccc--h-----------hhhhhHHhhcCchhhhhh
Confidence            6999999944  59999999999998887655  57776666554410  0           011222234555555555


Q ss_pred             c-ccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccc
Q psy5279         939 P-IVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017 (1310)
Q Consensus       939 ~-~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~A 1017 (1310)
                      . +....+..++||+..+++|++|||++|||.|||||||+|++.  .+.+||.|||+|+.+...+...+  ++|||.|.|
T Consensus       512 rdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~--~Gy~KLVDFGFAKki~~g~KTwT--FcGTpEYVA  587 (732)
T KOG0614|consen  512 RDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDN--RGYLKLVDFGFAKKIGSGRKTWT--FCGTPEYVA  587 (732)
T ss_pred             hhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeecc--CCceEEeehhhHHHhccCCceee--ecCCccccc
Confidence            3 233455668899999999999999999999999999999986  56799999999999876665554  457799999


Q ss_pred             cccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccC-Ccchh
Q psy5279        1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKH-EVDWI 1094 (1310)
Q Consensus      1018 PEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~-~~~ri 1094 (1310)
                      ||++.+.+++.++|.||||+++||||+|.+||.+.++..++..|..+-  +.||   +.++..|.+|++++.+. |.+|.
T Consensus       588 PEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~P---r~I~k~a~~Lik~LCr~~P~ERL  664 (732)
T KOG0614|consen  588 PEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFP---RRITKTATDLIKKLCRDNPTERL  664 (732)
T ss_pred             chhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcc---cccchhHHHHHHHHHhcCcHhhh
Confidence            999999999999999999999999999999999999999988876653  3344   67889999999987765 44555


Q ss_pred             c-----HHhhhCCCcccc
Q psy5279        1095 T-----LANNIDHEFWHV 1107 (1310)
Q Consensus      1095 t-----~~e~L~H~f~~~ 1107 (1310)
                      .     +.++-.|.||..
T Consensus       665 G~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  665 GYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             ccccCChHHHHhhhhhhc
Confidence            4     567777777764

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=3.1e-25  Score=255.54  Aligned_cols=141  Identities=17%  Similarity=0.234  Sum_probs=125.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecC
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA  262 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~  262 (1310)
                      ..|++.+.||+|+||.||+|.+..+++.||+|+....      ....|+.+|++++|||||++++++...+..++||||+
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  139 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY  139 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence            4699999999999999999999999999999975432      2346999999999999999999999999999999999


Q ss_pred             CCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         263 GGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       263 ~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      . |+|...+.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++..
T Consensus       140 ~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kl~DfG~a~~~  207 (357)
T PHA03209        140 S-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVD--QVCIGDLGAAQFP  207 (357)
T ss_pred             C-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEecCcccccc
Confidence            6 477777754 34699999999999999999999999999999999999998655  7999999999854

>KOG0614|consensus

Probab=99.93  E-value=6.7e-28  Score=277.84  Aligned_cols=238  Identities=23%  Similarity=0.280  Sum_probs=190.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ..++...||-|+||.|=++........+|+|+++++.-   +..+.+..|-.||..++.|.||+||..|.+...+||.||
T Consensus       421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE  500 (732)
T KOG0614|consen  421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME  500 (732)
T ss_pred             hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence            45677889999999999988777666799999987542   334557789999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCCC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP  340 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~~  340 (1310)
                      -|-||+|+..+.+++.|.+..+++|+..+++|++|||++|||.|||||||+|++.+|  -+||.|||+||.+...+..-+
T Consensus       501 aClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~G--y~KLVDFGFAKki~~g~KTwT  578 (732)
T KOG0614|consen  501 ACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRG--YLKLVDFGFAKKIGSGRKTWT  578 (732)
T ss_pred             hhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCC--ceEEeehhhHHHhccCCceee
Confidence            999999999999999999999999999999999999999999999999999998776  899999999999999999999


Q ss_pred             cccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCCCCCC
Q psy5279         341 LEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFT  420 (1310)
Q Consensus       341 ~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~~~t  420 (1310)
                      +||||+||+     |++-++..                 .+.+.|+|+.             .+|.+..+++.||+.+..
T Consensus       579 FcGTpEYVA-----PEIILnKG-----------------HD~avDyWaL-------------GIli~ELL~G~pPFs~~d  623 (732)
T KOG0614|consen  579 FCGTPEYVA-----PEIILNKG-----------------HDRAVDYWAL-------------GILIYELLTGSPPFSGVD  623 (732)
T ss_pred             ecCCccccc-----chhhhccC-----------------cchhhHHHHH-------------HHHHHHHHcCCCCCCCCc
Confidence            999999996     66654432                 3445775555             566677777777777666


Q ss_pred             CCCCCcceecccccccccccccccCCCCCCCcccc--cCCCCC
Q psy5279         421 PEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWE--DNVPNR  461 (1310)
Q Consensus       421 p~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~~~--d~v~e~  461 (1310)
                      |--|...| ++..  |..+++-.+++.+-++|..+  |+-.||
T Consensus       624 pmktYn~I-LkGi--d~i~~Pr~I~k~a~~Lik~LCr~~P~ER  663 (732)
T KOG0614|consen  624 PMKTYNLI-LKGI--DKIEFPRRITKTATDLIKKLCRDNPTER  663 (732)
T ss_pred             hHHHHHHH-Hhhh--hhhhcccccchhHHHHHHHHHhcCcHhh
Confidence            54332222 3222  44445555555556666655  443444

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=5.7e-26  Score=245.48  Aligned_cols=153  Identities=23%  Similarity=0.280  Sum_probs=117.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC---C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE---P 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~---~ 1025 (1310)
                      ..++.|++.||.|||++||+|+||||+||+++.  ++.+||+|||++......... .....+++.|+|||.+.+.   .
T Consensus       104 ~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~y~~Pe~~~~~~~~~  180 (262)
T cd06613         104 AYVCRETLKGLAYLHETGKIHRDIKGANILLTE--DGDVKLADFGVSAQLTATIAK-RKSFIGTPYWMAPEVAAVERKGG  180 (262)
T ss_pred             HHHHHHHHHHHHHHHhCCceecCCChhhEEECC--CCCEEECccccchhhhhhhhc-cccccCCccccCchhhcccccCC
Confidence            345679999999999999999999999999985  456999999988655432211 1223456789999999877   7


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccc--cchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY--LFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~--~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++.++|+|||||++|+|++|.+||.+.+.......+....+..+.  .....+.+.++|+.+|+. ++.+|+++.+++.|
T Consensus       181 ~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         181 YDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             cCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            888999999999999999999999887655544433333222111  123456789999999886 57789999999999


Q ss_pred             Cc
Q psy5279        1103 EF 1104 (1310)
Q Consensus      1103 ~f 1104 (1310)
                      +|
T Consensus       261 ~~  262 (262)
T cd06613         261 PF  262 (262)
T ss_pred             CC
Confidence            87

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.93  E-value=4.4e-25  Score=247.92  Aligned_cols=149  Identities=25%  Similarity=0.399  Sum_probs=134.8

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|++.+.||+|+||.||++.+..+|..+|+|.+.... ......+.+|+++|++++||||++++++|..++.+|+||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            46899999999999999999999999999999986542 23345678999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ++||+|.+.+.+.+.+++..+..++.|++.||.|||+ ++|+||||||+|||++.++  .+||+|||+++.+.
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~  151 (308)
T cd06615          81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLI  151 (308)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC--cEEEccCCCccccc
Confidence            9999999999877789999999999999999999997 6999999999999998654  79999999998653

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.93  E-value=3.5e-25  Score=247.41  Aligned_cols=234  Identities=24%  Similarity=0.356  Sum_probs=174.1

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ....+|++.+.||+|+||.||+|.+..+++.||+|.+..........+.+|+.+|+.+.||||+++++.|......|+||
T Consensus        17 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~   96 (296)
T cd06654          17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (296)
T ss_pred             CcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence            34578999999999999999999999999999999997655555567889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l  338 (1310)
                      ||++||+|.+.+.. ..+++.++..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++...... ..
T Consensus        97 e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~--~~kl~dfg~~~~~~~~~~~~  173 (296)
T cd06654          97 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKR  173 (296)
T ss_pred             cccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC--CEEECccccchhcccccccc
Confidence            99999999998754 4689999999999999999999999999999999999997654  79999999988653321 11


Q ss_pred             CCcccchHHHh-------------------------hhcCCCccccCCCCCC-----CCCCCcchhhhhhhcccchhhch
Q psy5279         339 NPLEYDVRYVR-------------------------QALRHPWLNFADRKPT-----EDTPKLNTDALRNYYNLYKDWYG  388 (1310)
Q Consensus       339 ~~~~~t~~yv~-------------------------~~~r~P~l~~~~~~~~-----~~~p~~~~~~~~~~~~~~~D~~~  388 (1310)
                      ....+++.|++                         ..+..||.........     ...+..  .....+...+.|++.
T Consensus       174 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~  251 (296)
T cd06654         174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDFLN  251 (296)
T ss_pred             CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCC--CCccccCHHHHHHHH
Confidence            11223333322                         2233344221100000     000000  000122334566776


Q ss_pred             hhhhhhcccCCCCCCccCCCcceecCCCCC
Q psy5279         389 NAAVRRYYRRRPLNSCYTHPSRMIYPPGTQ  418 (1310)
Q Consensus       389 ~~~l~~~~~r~~~~~cl~hpw~~~~~~~~~  418 (1310)
                      ..+..+...|+++.+++.|||+....+...
T Consensus       252 ~~l~~~p~~Rpt~~eil~~~~~~~~~~~~~  281 (296)
T cd06654         252 RCLDMDVEKRGSAKELLQHQFLKIAKPLSS  281 (296)
T ss_pred             HHCcCCcccCcCHHHHhhChhhhccCCccc
Confidence            777778889999999999999865444333

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.92  E-value=2e-25  Score=239.65  Aligned_cols=102  Identities=29%  Similarity=0.553  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++|++|+||||+||+++.  ...++|+|||++....... .......++..|+|||.+.+...+.
T Consensus        96 ~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~--~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~~~~~~  172 (250)
T cd05123          96 RFYAAEIVLALEYLHSLGIIYRDLKPENILLDA--DGHIKLTDFGLAKELSSEG-SRTNTFCGTPEYLAPEVLLGKGYGK  172 (250)
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCcceEEEcC--CCcEEEeecCcceecccCC-CcccCCcCCccccChHHhCCCCCCc
Confidence            345679999999999999999999999999986  4569999999886653321 1122334567899999999888889


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|+||||+++|+|++|..||...+
T Consensus       173 ~~D~~slG~~~~~l~~g~~p~~~~~  197 (250)
T cd05123         173 AVDWWSLGVLLYEMLTGKPPFYAED  197 (250)
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCCCC
Confidence            9999999999999999999996543

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.92  E-value=4.4e-26  Score=254.98  Aligned_cols=156  Identities=22%  Similarity=0.321  Sum_probs=121.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++|++|+||||+||+++.  +..+||+|||++........ ......+++.|+|||.+.+..++.
T Consensus       118 ~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~--~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  194 (296)
T cd06655         118 AAVCRECLQALEFLHANQVIHRDIKSDNVLLGM--DGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGP  194 (296)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEccCccchhcccccc-cCCCcCCCccccCcchhcCCCCCc
Confidence            345679999999999999999999999999975  45699999998875543221 112234668999999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      ++|+|||||++|+|++|..||.+.+.......+.............+++..++++.+|+. ++.+|+++.+++.|+|+..
T Consensus       195 ~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~  274 (296)
T cd06655         195 KVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKL  274 (296)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence            999999999999999999999887665443333222111112234678899999999886 5677999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.92  E-value=2.1e-25  Score=242.64  Aligned_cols=148  Identities=27%  Similarity=0.471  Sum_probs=133.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc---------hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ---------YKSLFKNELDIMNQLCHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~---------~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~  254 (1310)
                      +|.+.+.||+|+||.||+|.+..+++.||+|.+......         ..+.+.+|+.++++++||||+++++++...+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            467889999999999999999999999999988653221         12457899999999999999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         255 FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .++||||+++++|.+.+...+.+++..+..++.|++.||+|||++||+||||||+|||++.++  .+||+|||+++.+.
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~--~~~l~dfg~~~~~~  157 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKG--GIKISDFGISKKLE  157 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCC--CEEecccCCCcccc
Confidence            999999999999999998777799999999999999999999999999999999999997654  79999999998775

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.92  E-value=4.5e-26  Score=254.48  Aligned_cols=150  Identities=14%  Similarity=0.231  Sum_probs=112.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++........ ......+++.|+|||++.+..+
T Consensus       140 ~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  217 (304)
T cd05096         140 LLHVALQIASGMKYLSSLNFVHRDLATRNCLVGE--NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKF  217 (304)
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCcchhheEEcC--CccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCC
Confidence            3456789999999999999999999999999985  457999999998755322111 1112234578999999998899


Q ss_pred             CCccchhHHHHHHHHHhc--CCCCCCCCChhHHHhhhccc-----cccccccchhccHHHHHHHHHhcc-CCcchhcHHh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS--GASPFRGQSEPETRQNVNFV-----RYRFEYLFKELTQEATRFLMLIFK-HEVDWITLAN 1098 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt--G~~PF~g~~~~e~~~~I~~~-----~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e 1098 (1310)
                      +.++|||||||++|+|++  |..||.+.+..+...++...     ...+......+++..++++.+++. ++.+|+++.+
T Consensus       218 ~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~  297 (304)
T cd05096         218 TTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSD  297 (304)
T ss_pred             CchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHH
Confidence            999999999999999986  67899887766554433211     011111234567889999999886 5678999887


Q ss_pred             h
Q psy5279        1099 N 1099 (1310)
Q Consensus      1099 ~ 1099 (1310)
                      +
T Consensus       298 i  298 (304)
T cd05096         298 I  298 (304)
T ss_pred             H
Confidence            6

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.92  E-value=4e-25  Score=243.55  Aligned_cols=149  Identities=31%  Similarity=0.477  Sum_probs=134.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecC
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA  262 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~  262 (1310)
                      +.|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+|+.+|+.++||||+++++.|...+..|+||||+
T Consensus         5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~   84 (282)
T cd06643           5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   84 (282)
T ss_pred             HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence            45788899999999999999999999999999997655555567889999999999999999999999999999999999


Q ss_pred             CCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         263 GGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       263 ~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ++|+|...+.+ ...+++..+..++.|++.||.|||+.||+||||||+|||++.++  .+||+|||+++...
T Consensus        85 ~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~--~~kl~dfg~~~~~~  154 (282)
T cd06643          85 AGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDG--DIKLADFGVSAKNT  154 (282)
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCC--CEEEcccccccccc
Confidence            99999887754 34689999999999999999999999999999999999997655  79999999997653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.92  E-value=8.5e-25  Score=243.85  Aligned_cols=148  Identities=30%  Similarity=0.441  Sum_probs=131.0

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|.+.+.||+|+||.||+|.++.+++.||+|.+.... ......+.+|+.+++.|+||||+++++++..++.+|+||||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            57999999999999999999999999999999986543 23344567899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +.+ +|...+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        86 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~--~~kl~dfg~~~~~~  155 (301)
T cd07873          86 LDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG--ELKLADFGLARAKS  155 (301)
T ss_pred             ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC--cEEECcCcchhccC
Confidence            984 787777653 4589999999999999999999999999999999999998655  79999999997643

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0667|consensus

Probab=99.92  E-value=3e-25  Score=264.97  Aligned_cols=170  Identities=25%  Similarity=0.390  Sum_probs=144.8

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC-CC-----CcceEEEEEEeCCeE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HR-----NLVRLHDSYETKDSF  255 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~-HP-----NIVkL~d~f~~~~~l  255 (1310)
                      .-+|++++.||+|+||.|.+|.++.|++.||||+|+.+.. .......|+.||..|+ |.     |+|+++++|...+++
T Consensus       185 ~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl  263 (586)
T KOG0667|consen  185 AYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL  263 (586)
T ss_pred             EEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence            3489999999999999999999999999999999986543 2333457999999997 43     799999999999999


Q ss_pred             EEEEecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         256 TIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +||+|++.. +|.++++...  .|+-..++.++.||+.||.+||+.||||+|||||||||.+.+...|||+|||.|....
T Consensus       264 ciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~  342 (586)
T KOG0667|consen  264 CIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES  342 (586)
T ss_pred             eeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccC
Confidence            999999974 7999997654  4889999999999999999999999999999999999998777789999999998654


Q ss_pred             CCCCCCCcccchHHH-hhhcCCCccccCC
Q psy5279         334 SFGKLNPLEYDVRYV-RQALRHPWLNFAD  361 (1310)
Q Consensus       334 ~~~~l~~~~~t~~yv-~~~~r~P~l~~~~  361 (1310)
                      ..     .+   .|+ .+.||+|++.++-
T Consensus       343 q~-----vy---tYiQSRfYRAPEVILGl  363 (586)
T KOG0667|consen  343 QR-----VY---TYIQSRFYRAPEVILGL  363 (586)
T ss_pred             Cc-----ce---eeeeccccccchhhccC
Confidence            32     11   243 3689999987764

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.92  E-value=6.7e-26  Score=250.01  Aligned_cols=101  Identities=21%  Similarity=0.380  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHHHC-CceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC--
Q psy5279         948 DAYCVTSVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-- 1024 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~-gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-- 1024 (1310)
                      ...++.|++.||+|||+. ||+||||||+|||++.  ...+||+|||++.........  ....+++.|+|||++.+.  
T Consensus       109 ~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~  184 (288)
T cd06616         109 LGKIAVATVKALNYLKEELKIIHRDVKPSNILLDR--NGNIKLCDFGISGQLVDSIAK--TRDAGCRPYMAPERIDPSAR  184 (288)
T ss_pred             HHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEcc--CCcEEEeecchhHHhccCCcc--ccccCccCccCHHHhccccc
Confidence            345678999999999984 9999999999999985  456999999998654322111  122467889999999876  


Q ss_pred             -CCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1025 -PIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1025 -~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                       .++.++|+|||||++|+|++|.+||...
T Consensus       185 ~~~~~~~Di~slG~il~el~~g~~p~~~~  213 (288)
T cd06616         185 DGYDVRSDVWSLGITLYEVATGKFPYPKW  213 (288)
T ss_pred             cCCcchhhhhHHHHHHHHHHhCCCCchhc
Confidence             6889999999999999999999999643

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.92  E-value=2e-25  Score=269.39  Aligned_cols=169  Identities=22%  Similarity=0.329  Sum_probs=140.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD----  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~----  253 (1310)
                      ...++|.+.+.||+|+||+||+|.++.+|+.||||++....  ......+.+|+.+|..++|+||+++++.+...+    
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            34579999999999999999999999999999999997543  234456789999999999999999998876443    


Q ss_pred             ----eEEEEEecCCCCchHHHhhhc----CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEe
Q psy5279         254 ----SFTIISELAGGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTD  325 (1310)
Q Consensus       254 ----~lyLVmEy~~GGeL~~~l~~~----~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsD  325 (1310)
                          .+++||||+++|+|.+.+...    ..+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~--~vkL~D  186 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNG--LVKLGD  186 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCC--CEEEEe
Confidence                378999999999999888542    3589999999999999999999999999999999999998655  799999


Q ss_pred             eccceeecCC---CCCCCcccchHHHhh
Q psy5279         326 FGLSRRITSF---GKLNPLEYDVRYVRQ  350 (1310)
Q Consensus       326 FGLAr~i~~~---~~l~~~~~t~~yv~~  350 (1310)
                      ||+++.+...   ....+.+||+.|+++
T Consensus       187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aP  214 (496)
T PTZ00283        187 FGFSKMYAATVSDDVGRTFCGTPYYVAP  214 (496)
T ss_pred             cccCeeccccccccccccccCCcceeCH
Confidence            9999876432   123345666666543

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=1.9e-25  Score=243.06  Aligned_cols=147  Identities=21%  Similarity=0.278  Sum_probs=112.8

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||.|||++||+||||||+||+++.  +..+||+|||+++...............+..|+|||.+.+..++.+
T Consensus       107 ~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  184 (261)
T cd05068         107 DMAAQVASGMAYLEAQNYIHRDLAARNVLVGE--NNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIK  184 (261)
T ss_pred             HHHHHHHHHHHHHHhCCeeeccCCcceEEEcC--CCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCch
Confidence            45679999999999999999999999999986  4569999999987654221111111112347999999999899999


Q ss_pred             cchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1030 TDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1030 sDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +|+|||||++|+|++ |..||.+.+.......+... +..+ .....+....+++.+|+. +|.+|+++.+.+
T Consensus       185 ~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~  255 (261)
T cd05068         185 SDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-YRMP-CPPGCPKELYDIMLDCWKEDPDDRPTFETLQ  255 (261)
T ss_pred             hhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCC-CCCcCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            999999999999999 99999988777666555432 2222 123567889999999886 566888887754

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.92  E-value=1e-25  Score=249.64  Aligned_cols=100  Identities=31%  Similarity=0.463  Sum_probs=83.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ...++.||+.||.|||+.|++|+||+|+||+++.  +..++|+|||++........   ....++..|+|||.+.+..++
T Consensus       107 ~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~---~~~~~~~~y~~pE~~~~~~~~  181 (287)
T cd06621         107 LGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTR--KGQVKLCDFGVSGELVNSLA---GTFTGTSFYMAPERIQGKPYS  181 (287)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEec--CCeEEEeecccccccccccc---ccccCCccccCHHHhcCCCCC
Confidence            3456789999999999999999999999999986  45699999999865432111   123456789999999988999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|+|||||++|+|++|..||...
T Consensus       182 ~~~Dv~slG~il~~l~~g~~p~~~~  206 (287)
T cd06621         182 ITSDVWSLGLTLLEVAQNRFPFPPE  206 (287)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCcc
Confidence            9999999999999999999999754

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PTZ00284 protein kinase; Provisional

Probab=99.92  E-value=7.8e-25  Score=261.25  Aligned_cols=165  Identities=21%  Similarity=0.311  Sum_probs=131.7

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCC------CcceEEEEEEeC-C
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR------NLVRLHDSYETK-D  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HP------NIVkL~d~f~~~-~  253 (1310)
                      ..++|++.+.||+|+||+||+|.+..+++.||||+++... ........|+.+|+.+.|+      +|++++++|..+ +
T Consensus       127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~  205 (467)
T PTZ00284        127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETG  205 (467)
T ss_pred             CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCc
Confidence            3578999999999999999999999999999999996432 2233456788888877654      588999998765 5


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCC--------------
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGG--------------  318 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~--------------  318 (1310)
                      .+++|||++ |++|.+.+.+.+.+++..++.++.||+.||+|||+ .|||||||||+|||++.++.              
T Consensus       206 ~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~  284 (467)
T PTZ00284        206 HMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDP  284 (467)
T ss_pred             eEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence            789999988 67888888877789999999999999999999998 59999999999999986542              


Q ss_pred             CeEEEEeeccceeecCCCCCCCcccchHHHh
Q psy5279         319 RHLLLTDFGLSRRITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       319 ~~VKLsDFGLAr~i~~~~~l~~~~~t~~yv~  349 (1310)
                      ..+||+|||++.....  .....++|+.|++
T Consensus       285 ~~vkl~DfG~~~~~~~--~~~~~~gt~~Y~A  313 (467)
T PTZ00284        285 CRVRICDLGGCCDERH--SRTAIVSTRHYRS  313 (467)
T ss_pred             ceEEECCCCccccCcc--ccccccCCccccC
Confidence            2599999999864322  2233445544433

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.92  E-value=9.5e-25  Score=239.41  Aligned_cols=149  Identities=28%  Similarity=0.483  Sum_probs=133.8

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|++.+.||+|+||.||+|.+..+|+.||+|++....  ......+.+|+.+++.++||||+++++++.....+|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            4889999999999999999999999999999987643  23345688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      + |++|.+.+... ..+++.++..++.||+.||.|||++||+|+||||+||+++.++  .+||+|||+++.....
T Consensus        81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~--~~~l~dfg~~~~~~~~  152 (286)
T cd07832          81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG--VLKIADFGLARLFSEE  152 (286)
T ss_pred             c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCC--cEEEeeeeecccccCC
Confidence            9 99999888643 4589999999999999999999999999999999999998654  7999999999876543

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0608|consensus

Probab=99.92  E-value=6.9e-26  Score=265.43  Aligned_cols=149  Identities=25%  Similarity=0.406  Sum_probs=136.6

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ---YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~---~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      +..|..++.||-|+||+|.++...+|...||+|.+.+..--   ....++.|-.||..-+.+.||+|+..|.+++.+|+|
T Consensus       628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV  707 (1034)
T KOG0608|consen  628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV  707 (1034)
T ss_pred             ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence            45688899999999999999999999999999999765432   233467899999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      |||++||+++..|.+.+.|.|.-+++|++++..|+++.|..|+|||||||+|||||.+|  +|||+||||..-+
T Consensus       708 MdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdG--HIKLTDFGLCTGf  779 (1034)
T KOG0608|consen  708 MDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLTDFGLCTGF  779 (1034)
T ss_pred             EeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCC--ceeeeeccccccc
Confidence            99999999999999999999999999999999999999999999999999999999877  9999999998643

>KOG0577|consensus

Probab=99.92  E-value=1.3e-25  Score=261.95  Aligned_cols=98  Identities=28%  Similarity=0.414  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC---CC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE---EP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~---~~ 1025 (1310)
                      +.+..+.+.||.|||+.+.||||||.-|||++.  .+.|||+|||.|....+..     .+.|||+||||||+..   +.
T Consensus       129 AAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse--~g~VKLaDFGSAsi~~PAn-----sFvGTPywMAPEVILAMDEGq  201 (948)
T KOG0577|consen  129 AAITHGALQGLAYLHSHNRIHRDIKAGNILLSE--PGLVKLADFGSASIMAPAN-----SFVGTPYWMAPEVILAMDEGQ  201 (948)
T ss_pred             HHHHHHHHHHHHHHHHhhHHhhhccccceEecC--CCeeeeccccchhhcCchh-----cccCCccccchhHheeccccc
Confidence            445668999999999999999999999999986  5679999999886654432     3568899999999863   46


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      |+.++||||||+++.||.-.++|+-..+
T Consensus       202 YdgkvDvWSLGITCIELAERkPPlFnMN  229 (948)
T KOG0577|consen  202 YDGKVDVWSLGITCIELAERKPPLFNMN  229 (948)
T ss_pred             cCCccceeeccchhhhhhhcCCCccCch
Confidence            9999999999999999999999976544

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.92  E-value=5e-26  Score=252.54  Aligned_cols=160  Identities=22%  Similarity=0.410  Sum_probs=122.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ...++.|++.||.|||++||+||||||+|||++.  ...+||+|||++.........  ....|++.|+|||++.+..++
T Consensus       104 ~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~--~~~~kl~Dfg~~~~~~~~~~~--~~~~g~~~~~aPE~~~~~~~~  179 (285)
T cd05632         104 ALFYAAEILCGLEDLHRENTVYRDLKPENILLDD--YGHIRISDLGLAVKIPEGESI--RGRVGTVGYMAPEVLNNQRYT  179 (285)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECC--CCCEEEecCCcceecCCCCcc--cCCCCCcCccChHHhcCCCCC
Confidence            3456779999999999999999999999999975  456999999998654322111  223567999999999988999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccc-cccchhccHHHHHHHHHhcc-CCcchhc-----HHhhh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFK-HEVDWIT-----LANNI 1100 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f-~~~~~~lS~eakdLL~~il~-~~~~rit-----~~e~L 1100 (1310)
                      .++|+|||||++|+|++|..||.+.........+....... ......++.++.+|+..++. +|.+|++     ..+.+
T Consensus       180 ~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~  259 (285)
T cd05632         180 LSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVK  259 (285)
T ss_pred             cccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHH
Confidence            99999999999999999999998876654433332211111 12234678899999998886 5667888     77889


Q ss_pred             CCCcccccccc
Q psy5279        1101 DHEFWHVKDLK 1111 (1310)
Q Consensus      1101 ~H~f~~~~~l~ 1111 (1310)
                      .|+|+.....+
T Consensus       260 ~~~~~~~~~~~  270 (285)
T cd05632         260 RHPFFRNMNFK  270 (285)
T ss_pred             cChhhhcCCHH
Confidence            99998765443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.92  E-value=4.2e-25  Score=250.59  Aligned_cols=150  Identities=26%  Similarity=0.381  Sum_probs=127.9

Q ss_pred             CCCeeeeceecccCceEEEEEEE-----cCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeC-C
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVE-----RSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETK-D  253 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~-----k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~-~  253 (1310)
                      .++|++.+.||+|+||.||+|.+     ..+++.||+|++.... ......+.+|+.+|+.+ +|||||+++++|... +
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            36799999999999999999975     3456789999986532 23345688999999999 899999999988765 4


Q ss_pred             eEEEEEecCCCCchHHHhhhc-----------------------------------------------------------
Q psy5279         254 SFTIISELAGGGELLHSLTRQ-----------------------------------------------------------  274 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~-----------------------------------------------------------  274 (1310)
                      .+|+||||++||+|.+.+...                                                           
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            689999999999999888642                                                           


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         275 ---SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       275 ---~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                         ..+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+.
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~--~~kl~DfG~a~~~~  225 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIY  225 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCC--cEEEeecccccccc
Confidence               2377788899999999999999999999999999999998654  79999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.92  E-value=7.2e-25  Score=243.08  Aligned_cols=150  Identities=29%  Similarity=0.451  Sum_probs=135.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ..+.|++.+.||+|+||.||+|.+..+++.||+|++..........+.+|+.+++.++||||++++++|..++.+|+|||
T Consensus        10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (292)
T cd06644          10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE   89 (292)
T ss_pred             cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence            34779999999999999999999999999999999976655556678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         261 LAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       261 y~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      |++|++|...+.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++..
T Consensus        90 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~kl~dfg~~~~~  160 (292)
T cd06644          90 FCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG--DIKLADFGVSAKN  160 (292)
T ss_pred             cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC--CEEEccCccceec
Confidence            9999999877654 34589999999999999999999999999999999999997654  7999999998764

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=3.6e-25  Score=243.28  Aligned_cols=150  Identities=30%  Similarity=0.465  Sum_probs=136.0

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .+.|++.+.||+|+||.||+|.+..+++.+|+|++........+.+.+|+.+|++++||||+++++++..++.+|+||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            46799999999999999999999999999999999765544556788999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +++|+|...+... ..+++..++.++.|++.||.|||++||+||||||+|||++.++  .+||+|||++....
T Consensus        84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~--~~~l~d~g~~~~~~  154 (280)
T cd06611          84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG--DVKLADFGVSAKNK  154 (280)
T ss_pred             cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCC--CEEEccCccchhhc
Confidence            9999999888654 4599999999999999999999999999999999999998655  79999999987653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.6e-24  Score=234.13  Aligned_cols=151  Identities=28%  Similarity=0.479  Sum_probs=138.0

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .+.|++.+.||+|+||.||+|.+..+++.+|+|++..........+.+|+.+|+.++||||+++++++...+.+|++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            46799999999999999999999999999999999765544567788999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +++++|.+.+... ..+++.++..++.|++.||.|||++||+|+||||+||+++.++  .+||+|||++..+..
T Consensus        82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~d~g~~~~~~~  153 (262)
T cd06613          82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDG--DVKLADFGVSAQLTA  153 (262)
T ss_pred             CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCC--CEEECccccchhhhh
Confidence            9999999988765 6799999999999999999999999999999999999998655  799999999987643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.92  E-value=8e-25  Score=237.77  Aligned_cols=150  Identities=28%  Similarity=0.495  Sum_probs=134.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc------chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN------QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~------~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .|+..+.||+|+||.||+|.+..+++.||+|++.....      .....+.+|+.+|+.++||||+++++++...+.+++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            37788999999999999999999999999999874321      134568899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ||||++|++|.+.+...+.+++..+..++.||+.||.|||++|++||||||+||+++.++ ..+||+|||+++.+..
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~-~~~~l~dfg~~~~~~~  156 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG-QRLRIADFGAAARLAA  156 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-CEEEEccccccccccc
Confidence            999999999999988777899999999999999999999999999999999999997543 4699999999987654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.92  E-value=5.6e-25  Score=239.81  Aligned_cols=149  Identities=26%  Similarity=0.454  Sum_probs=131.7

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--c---chHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--N---QYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSF  255 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~l  255 (1310)
                      ..|++.+.||+|+||.||+|.+..+|+.||+|.+....  .   .....+.+|+.+|+.++||||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            46889999999999999999999999999999886321  1   2235678899999999999999999998764  578


Q ss_pred             EEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         256 TIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |+||||++||+|.+.+.+...+++..+..++.|++.||.|||++||+|+||||+|||++.++  .+||+|||+++...
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~~l~Dfg~~~~~~  157 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVG--NVKLGDFGASKRLQ  157 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCC--CEEECcCccccccc
Confidence            99999999999999988777789999999999999999999999999999999999998654  79999999998653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.92  E-value=3.5e-25  Score=241.54  Aligned_cols=151  Identities=24%  Similarity=0.428  Sum_probs=132.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeC------
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETK------  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~------  252 (1310)
                      +....|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+|+.+ +||||+++++.|...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            34567889999999999999999999999999999987543 3345678899999998 799999999998753      


Q ss_pred             CeEEEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         253 DSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      ..+|+||||+.+|+|.+.+...  ..+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~--~~~l~Dfg~~~  159 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA--EVKLVDFGVSA  159 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCC--CEEEccCCCce
Confidence            4689999999999999988753  3589999999999999999999999999999999999998655  79999999998


Q ss_pred             eec
Q psy5279         331 RIT  333 (1310)
Q Consensus       331 ~i~  333 (1310)
                      ...
T Consensus       160 ~~~  162 (272)
T cd06637         160 QLD  162 (272)
T ss_pred             ecc
Confidence            764

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.92  E-value=7.4e-26  Score=252.83  Aligned_cols=154  Identities=21%  Similarity=0.333  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.|++.||.|||++||+||||||+|||++.  +..+||+|||++........ ......+++.|+|||.+.+..++.++
T Consensus       121 i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~--~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~  197 (296)
T cd06654         121 VCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKV  197 (296)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCHHHEEEcC--CCCEEECccccchhcccccc-ccCcccCCccccCHHHHcCCCCCccc
Confidence            4569999999999999999999999999975  45799999998865432211 11223567899999999988899999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcccc
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      |+|||||++|+|++|..||...+.......+.............+++..++++.+|+. ++.+|+++.+++.|+|+..
T Consensus       198 Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~  275 (296)
T cd06654         198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI  275 (296)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence            9999999999999999999877654332222211111111234578889999999886 6778999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=6.1e-25  Score=256.36  Aligned_cols=147  Identities=21%  Similarity=0.378  Sum_probs=129.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEc--CCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVER--SSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k--~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .+..+|++.+.||+|+||.||+|...  .+++.||+|.+...     ....+|+.+|++|+|||||+++++|...+.+|+
T Consensus        89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l  163 (392)
T PHA03207         89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCM  163 (392)
T ss_pred             hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence            35578999999999999999999764  45688999988643     234689999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||++. ++|.+.+.....+++.++..++.||+.||.|||++|||||||||+|||++.++  .+||+|||+|+.+..
T Consensus       164 v~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~--~~~l~DfG~a~~~~~  237 (392)
T PHA03207        164 VMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE--NAVLGDFGAACKLDA  237 (392)
T ss_pred             EehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEEccCccccccCc
Confidence            999996 57888887667799999999999999999999999999999999999998655  799999999987643

>KOG0669|consensus

Probab=99.92  E-value=3e-27  Score=254.91  Aligned_cols=182  Identities=26%  Similarity=0.426  Sum_probs=155.4

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEe--cCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeC-------
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETK-------  252 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~--~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-------  252 (1310)
                      ...|+...+||+|.||.||+|+++.+|+.||+|++-  ..+........+|+.+|..|.|+|++.|+++|.+.       
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~   95 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD   95 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence            356788889999999999999999999999998653  23344555667999999999999999998887543       


Q ss_pred             -CeEEEEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         253 -DSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       253 -~~lyLVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                       ..+||||.+|+. +|+..+... ..|+..+++.+|.+++.||.|+|+..|+|||+||+|+||+.++  .+||+|||+||
T Consensus        96 r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dg--ilklADFGlar  172 (376)
T KOG0669|consen   96 RATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDG--ILKLADFGLAR  172 (376)
T ss_pred             cceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCc--eEEeecccccc
Confidence             359999999986 787777655 5699999999999999999999999999999999999998766  89999999999


Q ss_pred             eecCCCCCCCcccchHHHhhhcCCCccccCCCCCCC
Q psy5279         331 RITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTE  366 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~  366 (1310)
                      .++.........||-..|++|||.|++.++++....
T Consensus       173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~  208 (376)
T KOG0669|consen  173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGP  208 (376)
T ss_pred             ceecccccCCCCcccceeeeecCCHHHhhcccccCC
Confidence            887655555556899999999999999999887543

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.92  E-value=9.8e-25  Score=239.62  Aligned_cols=147  Identities=27%  Similarity=0.448  Sum_probs=129.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .|++.+.||+|+||.||+|.++.+|+.||+|++....  ......+.+|+.+|+.++||||+++++++..++.+|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4788999999999999999999999999999986432  22345678899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhh---cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTR---QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~---~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +. ++|.+.+..   ...+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~~  152 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKG--VIKLADFGLARAFG  152 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCC--cEEECcccceeecC
Confidence            98 477776643   24589999999999999999999999999999999999998655  79999999998653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.92  E-value=1.9e-25  Score=250.01  Aligned_cols=158  Identities=23%  Similarity=0.362  Sum_probs=123.5

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||.|||++||+||||||+|||++.  +..+||+|||++........ ......+++.|+|||++.+..++.+
T Consensus       121 ~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~--~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~  197 (297)
T cd06659         121 TVCESVLQALCYLHSQGVIHRDIKSDSILLTL--DGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRTPYGTE  197 (297)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHeEEcc--CCcEEEeechhHhhcccccc-cccceecCccccCHHHHccCCCCch
Confidence            34669999999999999999999999999975  45799999998865432211 1122346789999999998889999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCccccc
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHVK 1108 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~~ 1108 (1310)
                      +|+|||||++|+|++|..||...+..+....+.............++.+..+++.+|+. ++.+|+++.+.++|+|+...
T Consensus       198 ~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~  277 (297)
T cd06659         198 VDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQT  277 (297)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence            99999999999999999999887766555444332222222334578889999999886 56789999999999998755


Q ss_pred             cc
Q psy5279        1109 DL 1110 (1310)
Q Consensus      1109 ~l 1110 (1310)
                      .+
T Consensus       278 ~~  279 (297)
T cd06659         278 GL  279 (297)
T ss_pred             CC
Confidence            44

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.92  E-value=1.1e-25  Score=256.16  Aligned_cols=99  Identities=25%  Similarity=0.520  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys~ 1028 (1310)
                      .++.||++||.|||++||+||||||+|||++.  ...+||+|||++.......    ....+++.|+|||.+.+ ..++.
T Consensus       112 ~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~--~~~~~l~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~  185 (328)
T cd07856         112 YFLYQILRGLKYVHSAGVVHRDLKPSNILINE--NCDLKICDFGLARIQDPQM----TGYVSTRYYRAPEIMLTWQKYDV  185 (328)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCHHHEeECC--CCCEEeCccccccccCCCc----CCCcccccccCceeeeccCCcCc
Confidence            45679999999999999999999999999975  4579999999886543211    11235678999999866 56889


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++|+|||||++|+|++|..||.+...
T Consensus       186 ~~Dv~slG~il~el~tg~~~f~~~~~  211 (328)
T cd07856         186 EVDIWSAGCIFAEMLEGKPLFPGKDH  211 (328)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999987654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.92  E-value=1.2e-24  Score=240.32  Aligned_cols=148  Identities=29%  Similarity=0.433  Sum_probs=131.0

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .+.|++.+.||+|+||.||+|.++.+++.||+|.+..... .....+.+|+.+|+.++||||+++++++.+.+..|+|||
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE   83 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence            3679999999999999999999999999999999865422 223446789999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         261 LAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       261 y~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      |+.+ +|.+.+.+. ..+++..++.++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++..
T Consensus        84 ~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~--~~kl~dfg~~~~~  153 (291)
T cd07844          84 YLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG--ELKLADFGLARAK  153 (291)
T ss_pred             cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCC--CEEECcccccccc
Confidence            9985 888877653 4589999999999999999999999999999999999998765  7999999999764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.92  E-value=5.1e-25  Score=246.40  Aligned_cols=242  Identities=24%  Similarity=0.380  Sum_probs=179.4

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ...+|++.+.||.|+||.||+|.+..+|+.||+|.+........+.+.+|+.+++.++||||+++++++...+.+|+|+|
T Consensus        17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   96 (296)
T cd06655          17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME   96 (296)
T ss_pred             CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence            34679999999999999999999999999999999976555556678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC-CC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK-LN  339 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~-l~  339 (1310)
                      |+.||+|...+.. ..+++.++..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++....... ..
T Consensus        97 ~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~--~~kl~dfg~~~~~~~~~~~~~  173 (296)
T cd06655          97 YLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDG--SVKLTDFGFCAQITPEQSKRS  173 (296)
T ss_pred             ecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEccCccchhcccccccCC
Confidence            9999999888764 4689999999999999999999999999999999999998654  799999999986543321 11


Q ss_pred             CcccchHHHhh-------------------------hcCCCccccCCCCC-----CCCCCCcchhhhhhhcccchhhchh
Q psy5279         340 PLEYDVRYVRQ-------------------------ALRHPWLNFADRKP-----TEDTPKLNTDALRNYYNLYKDWYGN  389 (1310)
Q Consensus       340 ~~~~t~~yv~~-------------------------~~r~P~l~~~~~~~-----~~~~p~~~~~~~~~~~~~~~D~~~~  389 (1310)
                      ..++++.|+++                         .+..||........     ....+..  .....+...+.+++..
T Consensus       174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~  251 (296)
T cd06655         174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSPIFRDFLNR  251 (296)
T ss_pred             CcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCccc--CCcccCCHHHHHHHHH
Confidence            12333333222                         12223211100000     0000000  0001122334666777


Q ss_pred             hhhhhcccCCCCCCccCCCcceecCCCCCCCCCCCCcc
Q psy5279         390 AAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTPDK  427 (1310)
Q Consensus       390 ~~l~~~~~r~~~~~cl~hpw~~~~~~~~~~tp~~~p~~  427 (1310)
                      .+..+...|+++.+++.|||.....+....++...|.+
T Consensus       252 ~l~~dp~~Rpt~~~il~~~~~~~~~~~~~~~~~~~~~~  289 (296)
T cd06655         252 CLEMDVEKRGSAKELLQHPFLKLAKPLSSLTPLILAAK  289 (296)
T ss_pred             HhhcChhhCCCHHHHhhChHhhhccccccCCccccchh
Confidence            77778899999999999999876667666666644443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.92  E-value=1.1e-24  Score=241.57  Aligned_cols=148  Identities=32%  Similarity=0.519  Sum_probs=132.7

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc-----hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-----YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~-----~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      +|++.+.||+|+||.||+|.+..+|+.||||.+......     ....+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            478889999999999999999999999999999754322     234567899999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         259 SELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||+ +|+|.+.+.... .+++..+..++.||++||.|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~--~~~l~dfg~~~~~~~  154 (298)
T cd07841          81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDG--VLKLADFGLARSFGS  154 (298)
T ss_pred             Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCC--CEEEccceeeeeccC
Confidence            9999 889999987665 699999999999999999999999999999999999998655  799999999987654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>PHA02988 hypothetical protein; Provisional

Probab=99.92  E-value=7e-26  Score=252.41  Aligned_cols=144  Identities=13%  Similarity=0.127  Sum_probs=114.8

Q ss_pred             HHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC--CCCC
Q psy5279         951 CVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE--EPIF 1027 (1310)
Q Consensus       951 i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~--~~ys 1027 (1310)
                      ++.|++.||.|||+ .+++||||||+|||++.  ++.+||+|||+++......    ....+++.|+|||++.+  ..++
T Consensus       127 i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~--~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~  200 (283)
T PHA02988        127 MAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTE--NYKLKIICHGLEKILSSPP----FKNVNFMVYFSYKMLNDIFSEYT  200 (283)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCcCChhhEEECC--CCcEEEcccchHhhhcccc----ccccCcccccCHHHhhhcccccc
Confidence            45699999999998 49999999999999986  4679999999987543211    12346789999999976  6789


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      .++|||||||++|+|++|..||.+.+..+....+.....+++ .....+++.++|+.+++. ++.+|+++.+++.
T Consensus       201 ~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        201 IKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLK-LPLDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             chhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC-CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            999999999999999999999999887777666644333332 123578899999999887 5668999888763

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.92  E-value=1.2e-24  Score=249.37  Aligned_cols=151  Identities=23%  Similarity=0.365  Sum_probs=129.9

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-----
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-----  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-----  253 (1310)
                      +.++|++.+.||+|+||.||+|.+..+|+.||+|++.+..  ......+.+|+.+|+.++||||++++++|....     
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            5678999999999999999999999999999999986432  233445778999999999999999999986543     


Q ss_pred             -eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         254 -SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       254 -~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                       ..|+||||+.+ +|.+.+...  +++..+..++.|++.||+|||++||+||||||+|||++.++  .+||+|||+++..
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~--~~kL~Dfg~~~~~  168 (353)
T cd07850          94 QDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTA  168 (353)
T ss_pred             CcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC--CEEEccCccceeC
Confidence             57999999975 777766543  89999999999999999999999999999999999998665  7999999999876


Q ss_pred             cCCC
Q psy5279         333 TSFG  336 (1310)
Q Consensus       333 ~~~~  336 (1310)
                      ....
T Consensus       169 ~~~~  172 (353)
T cd07850         169 GTSF  172 (353)
T ss_pred             CCCC
Confidence            5443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.92  E-value=3.3e-25  Score=242.73  Aligned_cols=150  Identities=18%  Similarity=0.283  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++........ ......+++.|+|||++.+..+
T Consensus       124 ~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~--~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  201 (280)
T cd05049         124 LLQIAVQIASGMVYLASQHFVHRDLATRNCLVGY--DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKF  201 (280)
T ss_pred             HHHHHHHHHHHHHHHhhCCeeccccccceEEEcC--CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCc
Confidence            3456789999999999999999999999999985  467999999998754322111 1112234578999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|||||||++|+|++ |..||.+.+..+....+......  .....++.+.++++.+|+. ++.+|+++.++++
T Consensus       202 ~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         202 TTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLL--QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             chhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            999999999999999998 99999888777766665543322  2234678899999999886 5678999887653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG4279|consensus

Probab=99.92  E-value=1.5e-25  Score=264.05  Aligned_cols=225  Identities=25%  Similarity=0.410  Sum_probs=185.0

Q ss_pred             eecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCCchHH
Q psy5279         190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLH  269 (1310)
Q Consensus       190 ~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GGeL~~  269 (1310)
                      +||+|.||+||-|+++.|....|||-|..+.....+-+..||.+.+.|+|.|||++++.+..++.+-|.||-++||+|..
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            59999999999999999999999999987777777778899999999999999999999999999999999999999999


Q ss_pred             Hhhhc-CCC--CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CCCCcccch
Q psy5279         270 SLTRQ-SYY--TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KLNPLEYDV  345 (1310)
Q Consensus       270 ~l~~~-~~l--sE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l~~~~~t~  345 (1310)
                      .+... +.+  +|..+.+|.+||++||+|||++.|||||||-+|+|++.-. +.+||+|||-+|++..-+ ...++-||.
T Consensus       662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTyS-GvlKISDFGTsKRLAginP~TETFTGTL  740 (1226)
T KOG4279|consen  662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYS-GVLKISDFGTSKRLAGINPCTETFTGTL  740 (1226)
T ss_pred             HHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeecc-ceEEecccccchhhccCCccccccccch
Confidence            88754 446  7889999999999999999999999999999999998654 579999999999875543 344678888


Q ss_pred             HHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCCccCCCcceecCCCCCCCCCC
Q psy5279         346 RYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEP  423 (1310)
Q Consensus       346 ~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~~~tp~~  423 (1310)
                      .|++     |++-               ++-..-|..+.| | +||+.+++.+.|+|.-+.. .|=+.-+..|.-.+-++
T Consensus       741 QYMA-----PEvI---------------DqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elg-spqAAMFkVGmyKvHP~  799 (1226)
T KOG4279|consen  741 QYMA-----PEVI---------------DQGPRGYGKAADIWSFGCTMVEMATGRPPFVELG-SPQAAMFKVGMYKVHPP  799 (1226)
T ss_pred             hhhC-----hHhh---------------ccCCcCCCchhhhhhccceeEeeccCCCCeeecC-ChhHhhhhhcceecCCC
Confidence            8886     4432               222234677777 7 8999999999999987753 34444455555556556


Q ss_pred             CCcceeccccccccc
Q psy5279         424 TPDKVLVSRDLRDVK  438 (1310)
Q Consensus       424 ~p~~i~v~~~~rD~~  438 (1310)
                      +|..  +|...+.|.
T Consensus       800 iPee--lsaeak~Fi  812 (1226)
T KOG4279|consen  800 IPEE--LSAEAKNFI  812 (1226)
T ss_pred             CcHH--HHHHHHHHH
Confidence            8888  666655443

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.92  E-value=1.2e-24  Score=242.92  Aligned_cols=151  Identities=24%  Similarity=0.362  Sum_probs=129.6

Q ss_pred             CCCeeeeceecccCceEEEEEEEcC----------------CCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcce
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERS----------------SGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVR  244 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~----------------Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVk  244 (1310)
                      .++|.+.++||+|+||.||+|.+..                ++..||+|++.... ......+.+|+.+|++++|||||+
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            3678999999999999999998543                34579999987543 234556889999999999999999


Q ss_pred             EEEEEEeCCeEEEEEecCCCCchHHHhhhcC-------------------CCCHHHHHHHHHHHHHHHHHhhhCCeeecC
Q psy5279         245 LHDSYETKDSFTIISELAGGGELLHSLTRQS-------------------YYTEYDIAHYIRQLLSGLDYMHRLSIAHLG  305 (1310)
Q Consensus       245 L~d~f~~~~~lyLVmEy~~GGeL~~~l~~~~-------------------~lsE~~i~~ii~QIl~GL~YLHs~gIVHRD  305 (1310)
                      +++++...+.+++||||+++|+|.+.+....                   .++...+..++.||+.||.|||++||+|||
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~d  163 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRD  163 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            9999999999999999999999998875421                   356678889999999999999999999999


Q ss_pred             CCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         306 LTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       306 LKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||+|||++.++  .+||+|||+++.+..
T Consensus       164 lkp~Nill~~~~--~~kl~DfG~~~~~~~  190 (304)
T cd05096         164 LATRNCLVGENL--TIKIADFGMSRNLYA  190 (304)
T ss_pred             cchhheEEcCCc--cEEECCCccceeccc
Confidence            999999998654  799999999987643

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG4279|consensus

Probab=99.92  E-value=5.5e-26  Score=267.83  Aligned_cols=352  Identities=18%  Similarity=0.256  Sum_probs=222.6

Q ss_pred             eecceeeeeeeCCEEEEEEe-ccCCCcceeeecccCCcccccccccC----CCchhHHHHHHHHHHHHHHHHHCCceecc
Q psy5279         897 REKPITIPVVIGDKLEMKCL-AVGEPKPVIQWFKLGTSTLCYLPIVI----PTTHKDAYCVTSVLDGLQYLHWRGLCHLN  971 (1310)
Q Consensus       897 rE~~~~~~l~~g~~l~~~~l-~~G~p~~vi~~f~~g~~l~~~L~~~i----~~~~~~~~i~~QIl~AL~yLHs~gIVHRD  971 (1310)
                      -|+.+--.+.|.+++++-.+ ..+--..+...-..||++-.+|....    ..+....|+-+||++||.|||++.|||||
T Consensus       621 EEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRD  700 (1226)
T KOG4279|consen  621 EEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRD  700 (1226)
T ss_pred             HHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeecc
Confidence            34444445566666654432 22222334444456778777775542    24556788999999999999999999999


Q ss_pred             cCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC--CCCCccchhHHHHHHHHHhcCCCCC
Q psy5279         972 IEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE--PIFPQTDVWSAGVLAYVLLSGASPF 1049 (1310)
Q Consensus       972 LKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~--~ys~ksDIWSLGViLyeLLtG~~PF 1049 (1310)
                      ||-+|+|++. -++.+||+|||.++++.... ..+..++||..|||||++..+  +|+.++|||||||.+.||.||++||
T Consensus       701 IKGDNVLvNT-ySGvlKISDFGTsKRLAgin-P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF  778 (1226)
T KOG4279|consen  701 IKGDNVLVNT-YSGVLKISDFGTSKRLAGIN-PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPF  778 (1226)
T ss_pred             ccCCcEEEee-ccceEEecccccchhhccCC-ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCe
Confidence            9999999985 35679999999998876433 334567899999999999866  5899999999999999999999999


Q ss_pred             CCCChhHHHhhhcccccc-ccccchhccHHHHHHHHHhccC-CcchhcHHhhhCCCcccccccccccccccccccccccC
Q psy5279        1050 RGQSEPETRQNVNFVRYR-FEYLFKELTQEATRFLMLIFKH-EVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIG 1127 (1310)
Q Consensus      1050 ~g~~~~e~~~~I~~~~~~-f~~~~~~lS~eakdLL~~il~~-~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~ 1127 (1310)
                      .....+... ..+.+.|+ -|.+..++|.+|+.||.++|.+ +.+|.++.+.+..+|......+.......+-.......
T Consensus       779 ~ElgspqAA-MFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~kk~r~~ls~~ha~~~e~~  857 (1226)
T KOG4279|consen  779 VELGSPQAA-MFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNNKKPRPKLSLNHANQREML  857 (1226)
T ss_pred             eecCChhHh-hhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCCCCCCCCCCcccCCChhhc
Confidence            765444321 11223333 2456678999999999999874 56899999999999987764443222111100111111


Q ss_pred             Cccc-CCCccccc------ccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccccchh
Q psy5279        1128 WSEK-GIPSALFK------TKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1200 (1310)
Q Consensus      1128 ~s~~-~ips~lf~------~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~~~~~ 1200 (1310)
                      -|.. ..|...-+      -..++|.   ..|.++.++.=|.|-        .+|-....+..+             .-.
T Consensus       858 rS~S~Ptp~~vs~T~s~~f~~s~sp~---~~P~S~~t~~~s~~~--------vs~ir~p~e~~~-------------~s~  913 (1226)
T KOG4279|consen  858 RSISHPTPEPVSATLSAGFFSSSSPV---SQPSSPITRCTSHGH--------VSPIRSPLESAL-------------HSR  913 (1226)
T ss_pred             cccCCCCCcccccccccCccCCCCCc---cCCCCCCcccCCCCC--------cCCCCCcccchh-------------hcC
Confidence            1110 11111000      1224444   233444444333332        112211111000             113


Q ss_pred             ccCHHHHHHHHHhhhcCCCCCCCHHHhhcCC-------ccCC----ch---------hHHHHHHHHHHhhhhhhHhHHHH
Q psy5279        1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENR-------WLVP----SE---------YMIKKRERAVFLGNRLKEFSDEY 1260 (1310)
Q Consensus      1201 ~iS~eAkdfI~~lL~~dP~kRpTa~e~L~Hp-------Wl~~----~~---------~~~~~~~~~~~~~~~lk~~~~~~ 1260 (1310)
                      .+|++-++==.-||.+|-++|-|..++|+..       |-+.    ++         .+..+-++.+.++.--++.+++.
T Consensus       914 ~~s~ee~~S~~fmL~kdseRRasl~~~l~~e~d~i~~sl~tsl~q~se~~~l~r~~~e~llr~l~~~v~~~d~~kia~~l  993 (1226)
T KOG4279|consen  914 PISPEESSSGFFMLQKDSERRASLGQFLQDEKDLIIDSLSTSLIQQSETELLVRVHMEMLLRGLRDFVLKKDRTKIAKML  993 (1226)
T ss_pred             CCChhhcCCcceeeechhHHHHHHHHHhccchhhhhHHHHHHHHhccccchhHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence            3566655545568999999999999988764       2110    11         23566778888888888999999


Q ss_pred             hhhh-ccccccchhhh
Q psy5279        1261 HDLK-NKQFTSDSLSS 1275 (1310)
Q Consensus      1261 ~~~~-~~~~~s~~~~~ 1275 (1310)
                      .||| .-++++-++.-
T Consensus       994 ~~lkg~ld~d~~~ia~ 1009 (1226)
T KOG4279|consen  994 DDLKGLLDADTAGIAQ 1009 (1226)
T ss_pred             HHHhhhccccccchhh
Confidence            9997 44555544443

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.92  E-value=2e-25  Score=249.23  Aligned_cols=156  Identities=23%  Similarity=0.368  Sum_probs=119.4

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.||+.||.|||++||+||||||+||+++.  +..+||+|||++........ ......+++.|+|||.+.+..++.++
T Consensus       123 ~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~--~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~  199 (292)
T cd06658         123 VCLSVLRALSYLHNQGVIHRDIKSDSILLTS--DGRIKLSDFGFCAQVSKEVP-KRKSLVGTPYWMAPEVISRLPYGTEV  199 (292)
T ss_pred             HHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCEEEccCcchhhcccccc-cCceeecCccccCHHHHccCCCCchh
Confidence            4579999999999999999999999999975  45799999998865432111 11123467899999999988899999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcccccc
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHVKD 1109 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~~~ 1109 (1310)
                      |+|||||++|+|++|..||.+.+.......+..............+...++++.+|+. +|.+|+++.+++.|+|+....
T Consensus       200 Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~  279 (292)
T cd06658         200 DIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAG  279 (292)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccC
Confidence            9999999999999999999887665544433221111111123467889999998886 567899999999999987543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.92  E-value=5.8e-25  Score=241.67  Aligned_cols=147  Identities=27%  Similarity=0.438  Sum_probs=129.8

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|++.+.||+|+||.||+|.++.+|+.||+|.+.....  .....+.+|+.+|++++||||+++++++.+.+.+|+|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            48899999999999999999999999999999865322  2334577899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +.+ +|...+.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~--~~~l~dfg~~~~~~  150 (284)
T cd07839          81 CDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNG--ELKLADFGLARAFG  150 (284)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCC--cEEECccchhhccC
Confidence            985 67666654 45699999999999999999999999999999999999998655  79999999998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.92  E-value=1.9e-25  Score=242.17  Aligned_cols=150  Identities=25%  Similarity=0.437  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||++||.|||++|++|+||||+||+++.  ...++|+|||++........  .....++..|+|||.+.+..++.
T Consensus       103 ~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~  178 (258)
T cd05578         103 KFWICEIVLALEYLHSKGIIHRDIKPDNILLDE--QGHVHITDFNIATKVTPDTL--TTSTSGTPGYMAPEVLCRQGYSV  178 (258)
T ss_pred             HHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcC--CCCEEEeecccccccCCCcc--ccccCCChhhcCHHHHcccCCCC
Confidence            345679999999999999999999999999985  45699999998865533221  12234567899999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCCh---hHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcH--HhhhCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSE---PETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITL--ANNIDH 1102 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~---~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~--~e~L~H 1102 (1310)
                      ++|+|||||++|+|++|..||...+.   ...........   +.....++.++.++|.+|+. ++.+|++.  .+.+.|
T Consensus       179 ~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~  255 (258)
T cd05578         179 AVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETAD---VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNH  255 (258)
T ss_pred             cccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcccc---ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcC
Confidence            99999999999999999999998764   33332222112   22234577899999999886 56779999  899999


Q ss_pred             Ccc
Q psy5279        1103 EFW 1105 (1310)
Q Consensus      1103 ~f~ 1105 (1310)
                      +|+
T Consensus       256 ~~~  258 (258)
T cd05578         256 PYF  258 (258)
T ss_pred             CCC
Confidence            985

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.92  E-value=8.6e-26  Score=252.42  Aligned_cols=154  Identities=21%  Similarity=0.319  Sum_probs=117.9

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCcc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQT 1030 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ks 1030 (1310)
                      ++.|++.||.|||+.||+||||||+|||++.  ++.+||+|||++........ ......+++.|+|||.+.+..++.++
T Consensus       120 ~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~--~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~  196 (297)
T cd06656         120 VCRECLQALDFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKV  196 (297)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEECcCccceEccCCcc-CcCcccCCccccCHHHHcCCCCCcHH
Confidence            4579999999999999999999999999975  45699999999875533221 11223467899999999998899999


Q ss_pred             chhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcccc
Q psy5279        1031 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1031 DIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      |+|||||++|+|++|..||.+.+.......+.............+++..++|+.+|+. ++.+|+++.+++.|+|+..
T Consensus       197 Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~  274 (297)
T cd06656         197 DIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKL  274 (297)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcc
Confidence            9999999999999999999876543322222111111111234577889999999986 5667999999999998863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.92  E-value=2.8e-24  Score=237.84  Aligned_cols=149  Identities=32%  Similarity=0.476  Sum_probs=129.8

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .+.|.+.+.||+|+||.||+|.++.+|+.||+|++..... .....+.+|+.+|+.++||||+++++++..++..|+|||
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            4679999999999999999999999999999999865432 233456789999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         261 LAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       261 y~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |+. ++|...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~--~~~l~Dfg~~~~~~  154 (291)
T cd07870          84 YMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLG--ELKLADFGLARAKS  154 (291)
T ss_pred             ccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCC--cEEEeccccccccC
Confidence            996 566666543 34588889999999999999999999999999999999998655  79999999998643

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG0574|consensus

Probab=99.92  E-value=8.6e-27  Score=255.46  Aligned_cols=228  Identities=22%  Similarity=0.340  Sum_probs=180.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +-...|.++.+||+|+||.||+|.++.+|+.+|||.+...  .+...+..||.||++++.|.+|++|+.|-....+++||
T Consensus        30 ~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVM  107 (502)
T KOG0574|consen   30 PPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVM  107 (502)
T ss_pred             ChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeeh
Confidence            4556788999999999999999999999999999998643  34566778999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-C
Q psy5279         260 ELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-K  337 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~  337 (1310)
                      |||.-|+..+.+..+ ..++|.++..+++..+.||+|||...-||||||..|||++.+|  +.||+|||.|..+.... .
T Consensus       108 EYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G--~AKLADFGVAGQLTDTMAK  185 (502)
T KOG0574|consen  108 EYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDG--IAKLADFGVAGQLTDTMAK  185 (502)
T ss_pred             hhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccc--hhhhhhccccchhhhhHHh
Confidence            999999998888644 5699999999999999999999999999999999999998766  89999999998876532 4


Q ss_pred             CCCcccchHHHhh-------------------------hcCCCccccCCCCCCCCCCCcchhhhh---hhcccchhhchh
Q psy5279         338 LNPLEYDVRYVRQ-------------------------ALRHPWLNFADRKPTEDTPKLNTDALR---NYYNLYKDWYGN  389 (1310)
Q Consensus       338 l~~~~~t~~yv~~-------------------------~~r~P~l~~~~~~~~~~~p~~~~~~~~---~~~~~~~D~~~~  389 (1310)
                      -++..|||-++++                         .++.|+-........++.|.-.+..++   .+.+..-||+..
T Consensus       186 RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~  265 (502)
T KOG0574|consen  186 RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRS  265 (502)
T ss_pred             hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHH
Confidence            4566677644332                         133333322222222333322222222   234555789999


Q ss_pred             hhhhhcccCCCCCCccCCCcce
Q psy5279         390 AAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       390 ~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ++++....|-|+-+.++||++.
T Consensus       266 CLiK~PE~R~TA~~L~~H~Fik  287 (502)
T KOG0574|consen  266 CLIKKPEERKTALRLCEHTFIK  287 (502)
T ss_pred             HhcCCHHHHHHHHHHhhhhhhc
Confidence            9999999999999999999974

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.92  E-value=2e-25  Score=242.07  Aligned_cols=147  Identities=22%  Similarity=0.279  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||.|||++||+||||||+||+++.  +..+||+|||++...............++..|+|||++.+..++.+
T Consensus       104 ~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  181 (256)
T cd05114         104 SMCQDVCEGMEYLERNSFIHRDLAARNCLVSS--TGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSK  181 (256)
T ss_pred             HHHHHHHHHHHHHHHCCccccccCcceEEEcC--CCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchh
Confidence            45679999999999999999999999999975  4579999999887543222211122233457999999998889999


Q ss_pred             cchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccC-CcchhcHHhhh
Q psy5279        1030 TDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKH-EVDWITLANNI 1100 (1310)
Q Consensus      1030 sDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~-~~~rit~~e~L 1100 (1310)
                      +|+|||||++|+|++ |..||.+.+..+....+......  ......+.+..+++.+++.. |.+|+++.+++
T Consensus       182 ~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~  252 (256)
T cd05114         182 SDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRL--YRPKLASMTVYEVMYSCWHEKPEGRPTFAELL  252 (256)
T ss_pred             hhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHccCCcccCcCHHHHH
Confidence            999999999999999 99999988877776666543221  11234577899999998875 56788888765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.92  E-value=1.9e-25  Score=241.54  Aligned_cols=152  Identities=16%  Similarity=0.275  Sum_probs=122.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||+.|++|+||||+||+++.  ...+||+|||++........ ......+++.|+|||.+.+..++.
T Consensus       104 ~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~--~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~  180 (256)
T cd08221         104 LWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTK--AGLIKLGDFGISKILGSEYS-MAETVVGTPYYMSPELCQGVKYNF  180 (256)
T ss_pred             HHHHHHHHHHHHHHHhCCccccCCChHhEEEeC--CCCEEECcCcceEEcccccc-cccccCCCccccCHhhcCCCCCCC
Confidence            345679999999999999999999999999986  45699999999876533221 112234678999999998888889


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFW 1105 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~ 1105 (1310)
                      ++|+|||||++|+|++|..||.+.+..+....+....+.  ......+.+.++++.+++. ++.+|+++.+.+.|+|.
T Consensus       181 ~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         181 KSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYT--PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             cchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence            999999999999999999999988777766665543332  2235678899999999885 67789999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.92  E-value=1.6e-24  Score=274.28  Aligned_cols=233  Identities=21%  Similarity=0.284  Sum_probs=169.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEe--CCeE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYET--KDSF  255 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~--~~~l  255 (1310)
                      .+.+.|++.+.||+|+||.||+|.++.+++.||+|++....  ......+.+|+.+|++|+|||||+++++|..  ...+
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l   89 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL   89 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence            45678999999999999999999999999999999987543  2345568899999999999999999998854  4579


Q ss_pred             EEEEecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhC-------CeeecCCCCCCEEeecC--------
Q psy5279         256 TIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRL-------SIAHLGLTPGDLLVAHP--------  316 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~-------gIVHRDLKPeNILL~~~--------  316 (1310)
                      |||||||.+|+|.+.+..    .+.+++..+..++.||+.||.|||+.       +||||||||+||||+..        
T Consensus        90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~  169 (1021)
T PTZ00266         90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT  169 (1021)
T ss_pred             EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence            999999999999988864    24699999999999999999999984       59999999999999642        


Q ss_pred             -------CCCeEEEEeeccceeecCCCCCCCcccchHHHhhhcCC----Cc------cccC-------CCCCCCCCCCcc
Q psy5279         317 -------GGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRH----PW------LNFA-------DRKPTEDTPKLN  372 (1310)
Q Consensus       317 -------~~~~VKLsDFGLAr~i~~~~~l~~~~~t~~yv~~~~r~----P~------l~~~-------~~~~~~~~p~~~  372 (1310)
                             +...+||+|||+|+.+.........++|+.|+++....    ++      +.|+       ...+++.... .
T Consensus       170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~-~  248 (1021)
T PTZ00266        170 AQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN-N  248 (1021)
T ss_pred             ccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC-c
Confidence                   22358999999998775444444445666555432110    00      0000       0001110000 0


Q ss_pred             hhhh------------hhhcccchhhchhhhhhhcccCCCCCCccCCCcceec
Q psy5279         373 TDAL------------RNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIY  413 (1310)
Q Consensus       373 ~~~~------------~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~  413 (1310)
                      ..++            ......+.|++...+..+...|+++.+||.|||+...
T Consensus       249 ~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        249 FSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             HHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence            0111            0112234556666666678899999999999997533

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.92  E-value=1.9e-25  Score=242.98  Aligned_cols=152  Identities=25%  Similarity=0.400  Sum_probs=118.8

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-----ccccCCCCCCcccccccccCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-----LIHPINTPNPEFAAPEVLAEE 1024 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-----~~~~~~tGtp~Y~APEvl~~~ 1024 (1310)
                      .++.|++.||+|||++|++||||||+|||++.  +..+||+|||+++.......     .......+++.|+|||.+.+.
T Consensus       110 ~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~  187 (267)
T cd06628         110 NFVRQILKGLNYLHNRGIIHRDIKGANILVDN--KGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT  187 (267)
T ss_pred             HHHHHHHHHHHHHHhcCcccccCCHHHEEEcC--CCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccC
Confidence            34679999999999999999999999999975  45699999999876542111     011123466889999999988


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCC
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHE 1103 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~ 1103 (1310)
                      .++.++|+|||||++|+|++|..||.+.+.......+..  ...+.....++.+++++|.+|+. ++.+|+++.+++.|+
T Consensus       188 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  265 (267)
T cd06628         188 SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE--NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHP  265 (267)
T ss_pred             CCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc--cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCC
Confidence            899999999999999999999999987665444433322  12223334678899999999887 567899999999999


Q ss_pred             cc
Q psy5279        1104 FW 1105 (1310)
Q Consensus      1104 f~ 1105 (1310)
                      |+
T Consensus       266 ~~  267 (267)
T cd06628         266 FL  267 (267)
T ss_pred             CC
Confidence            85

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.92  E-value=1.7e-25  Score=244.44  Aligned_cols=153  Identities=24%  Similarity=0.324  Sum_probs=118.6

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccCCCCCC
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ++.|++.||.|||++||+||||||+||+++.  +..+||+|||++........  .......++..|+|||.+.+..++.
T Consensus       111 ~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  188 (266)
T cd06651         111 YTRQILEGMSYLHSNMIVHRDIKGANILRDS--AGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGR  188 (266)
T ss_pred             HHHHHHHHHHHHHhCCeeeCCCCHHHEEECC--CCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCc
Confidence            4679999999999999999999999999975  45699999999875432110  0111123568899999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWH 1106 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~ 1106 (1310)
                      ++|+||+||++|+|++|..||......+....+..... -+.....+++.+++++..++.++.+|+++.+++.|+|+.
T Consensus       189 ~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         189 KADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPT-NPQLPSHISEHARDFLGCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             hhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCC-CCCCchhcCHHHHHHHHHhcCChhhCcCHHHHhcCcccc
Confidence            99999999999999999999987655544433322111 122234578889999987778889999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.92  E-value=1.9e-25  Score=243.49  Aligned_cols=153  Identities=23%  Similarity=0.321  Sum_probs=119.2

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccCCCCCC
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ++.|++.||.|||++||+|+||||+|||++.  +..+||+|||++........  .......++..|+|||++.+..++.
T Consensus       111 ~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  188 (265)
T cd06652         111 YTRQILEGVSYLHSNMIVHRDIKGANILRDS--VGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGR  188 (265)
T ss_pred             HHHHHHHHHHHHHhCCEecCCCCHHHEEecC--CCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCc
Confidence            4569999999999999999999999999975  45799999998875432110  0111234678899999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWH 1106 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~ 1106 (1310)
                      ++|+|||||++|+|++|..||...........+.... ..+.....++..+.++|.+++.++.+|+++.+++.|+|..
T Consensus       189 ~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         189 KADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP-TNPVLPPHVSDHCRDFLKRIFVEAKLRPSADELLRHTFVH  265 (265)
T ss_pred             chhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCC-CCCCCchhhCHHHHHHHHHHhcChhhCCCHHHHhcCcccC
Confidence            9999999999999999999998765544443332221 1223345678889999999888888999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.92  E-value=2e-24  Score=232.56  Aligned_cols=150  Identities=28%  Similarity=0.509  Sum_probs=134.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-----chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-----QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-----~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      +|+..+.||+|+||+||+|....+++.||+|.+.....     ...+.+.+|+.+|+.++||||+++++++.....+|+|
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            46778999999999999999999999999999865331     2345688999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |||++|++|.+.+.+...+++..+..++.||+.||.|||++||+|+||||+||+++.++  .+||+|||+++.....
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~--~~kl~d~~~~~~~~~~  155 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG--VVKLADFGMAKQVVEF  155 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEccCccceecccc
Confidence            99999999999988777799999999999999999999999999999999999998654  7999999999876543

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.92  E-value=3.5e-25  Score=253.44  Aligned_cols=151  Identities=23%  Similarity=0.290  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||++..+..... .......+++.|+|||++.+..+
T Consensus       175 ~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~--~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  252 (337)
T cd05054         175 LISYSFQVARGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVY  252 (337)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeC--CCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCC
Confidence            4567789999999999999999999999999985  45799999999876532221 11122334568999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHH-hhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETR-QNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~-~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|||||||++|+|++ |..||.+....+.. ..+... .. .......+++..+++.+++. .+.+|+++.+++.|
T Consensus       253 ~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         253 TTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEG-TR-MRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             CccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhcc-CC-CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999999997 99999875443322 222211 11 11223567889999998886 66789999887754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.92  E-value=1.4e-25  Score=242.32  Aligned_cols=100  Identities=27%  Similarity=0.446  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.||+.||.|||+ +|++||||+|+||+++.  ...++|+|||++.......... ....++..|+|||.+....++.
T Consensus       103 ~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~--~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~y~~pE~~~~~~~~~  179 (264)
T cd06623         103 YIARQILKGLDYLHTKRHIIHRDIKPSNLLINS--KGEVKIADFGISKVLENTLDQC-NTFVGTVTYMSPERIQGESYSY  179 (264)
T ss_pred             HHHHHHHHHHHHHhccCCCccCCCCHHHEEECC--CCCEEEccCccceecccCCCcc-cceeecccccCHhhhCCCCCCc
Confidence            346699999999999 99999999999999976  5679999999887654322211 1223567899999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|+||||+++|+|++|..||...
T Consensus       180 ~~Dv~slG~il~~l~tg~~p~~~~  203 (264)
T cd06623         180 AADIWSLGLTLLECALGKFPFLPP  203 (264)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCccc
Confidence            999999999999999999999654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.92  E-value=5.2e-25  Score=248.31  Aligned_cols=97  Identities=30%  Similarity=0.451  Sum_probs=80.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc---CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA---EEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~---~~~ 1025 (1310)
                      ..++.||+.||.|||++||+||||+|+||+++.  +..+||+|||++......     ....+++.|+|||.+.   ...
T Consensus       128 ~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~--~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~  200 (317)
T cd06635         128 AAITHGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGSASIASPA-----NSFVGTPYWMAPEVILAMDEGQ  200 (317)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCcccEEECC--CCCEEEecCCCccccCCc-----ccccCCccccChhhhhcCCCCC
Confidence            345679999999999999999999999999975  457999999987643321     1234678899999974   456


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++.++|+|||||++|+|++|..||.+.
T Consensus       201 ~~~~~Dv~slGvil~el~~g~~p~~~~  227 (317)
T cd06635         201 YDGKVDVWSLGITCIELAERKPPLFNM  227 (317)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCCc
Confidence            788999999999999999999999654

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0986|consensus

Probab=99.92  E-value=9.2e-26  Score=258.42  Aligned_cols=199  Identities=25%  Similarity=0.403  Sum_probs=168.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|..-++||+|+||.||-|..+.||++||+|.+.++..   +......+|-.||.+++.|.||.|-.+|++++.++|||
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            557788999999999999999999999999998876532   23445678999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         260 ELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      ..|.||+|--+|-..+  .|+|..+++|++||+.||++||+.+||.|||||+|||+|+.|  +|+|+|.|||-.+.....
T Consensus       265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~G--hvRISDLGLAvei~~g~~  342 (591)
T KOG0986|consen  265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHG--HVRISDLGLAVEIPEGKP  342 (591)
T ss_pred             EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCC--CeEeeccceEEecCCCCc
Confidence            9999999988886665  699999999999999999999999999999999999998776  899999999999887766


Q ss_pred             CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCCCC
Q psy5279         338 LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGT  417 (1310)
Q Consensus       338 l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~  417 (1310)
                      ...-+||..|++     |++.-+                 ..|++..||++.             .|+....+.+-.|+.
T Consensus       343 ~~~rvGT~GYMA-----PEvl~n-----------------e~Y~~s~Dwf~l-------------GCllYemi~G~sPFr  387 (591)
T KOG0986|consen  343 IRGRVGTVGYMA-----PEVLQN-----------------EVYDFSPDWFSL-------------GCLLYEMIAGHSPFR  387 (591)
T ss_pred             cccccCcccccC-----HHHHcC-----------------CcccCCccHHHH-------------HhHHHHHHcccCchh
Confidence            666689999986     444311                 226777899777             666666665555544


Q ss_pred             C
Q psy5279         418 Q  418 (1310)
Q Consensus       418 ~  418 (1310)
                      +
T Consensus       388 ~  388 (591)
T KOG0986|consen  388 Q  388 (591)
T ss_pred             h
Confidence            3

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.92  E-value=6.8e-25  Score=241.77  Aligned_cols=148  Identities=24%  Similarity=0.351  Sum_probs=132.0

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|.+.... ......+.+|+.+|++++||||+++++.+...+.+|+||||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            46889999999999999999999999999999886542 23345688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc---CCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         262 AGGGELLHSLTRQ---SYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       262 ~~GGeL~~~l~~~---~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ++|++|...+...   ..+++..+..++.||+.||.|||+ .||+||||||+|||++.++  .+||+|||+++.+
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~  153 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG--QVKLCDFGVSGNL  153 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC--CEEEeecCCcccc
Confidence            9999998877653   368999999999999999999996 5999999999999998744  7999999999765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.92  E-value=1.1e-24  Score=236.32  Aligned_cols=150  Identities=25%  Similarity=0.462  Sum_probs=136.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .|++.+.||+|+||.||+|.+..+++.||+|++.+...   ...+.+.+|++++++++||||+++++.+..++.+|+|||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            48899999999999999999999999999999975432   334568899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |+.|++|...+.....+++..+..++.||++||.|||++||+|+||||+|||++.++  .+||+|||++......
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--~~~l~d~~~~~~~~~~  153 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQG--HVHITDFNIATKVTPD  153 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCC--CEEEeecccccccCCC
Confidence            999999999998777899999999999999999999999999999999999998765  7999999999876543

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.1e-24  Score=238.63  Aligned_cols=150  Identities=26%  Similarity=0.437  Sum_probs=135.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      ++|++.+.||.|+||.||+|.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++..+..+|+|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            46889999999999999999999999999999987543 23345678999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      +++++|.+.+... .+++..+..++.|++.||.|||++||+||||+|+||+++.++  .++|+|||+++.+...
T Consensus        81 ~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~d~g~~~~~~~~  151 (274)
T cd06609          81 CGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEG--DVKLADFGVSGQLTST  151 (274)
T ss_pred             eCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEcccccceeeccc
Confidence            9999999988754 789999999999999999999999999999999999998755  7999999999887543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.92  E-value=2.6e-25  Score=242.00  Aligned_cols=153  Identities=24%  Similarity=0.418  Sum_probs=119.7

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC-----cccccCCCCCCcccccccccCCC
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-----TLIHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g-----~~~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ++.|++.||.|||+.||+|+||||+||+++.  +..+||+|||++......+     ........+++.|+|||.+.+..
T Consensus       107 ~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~  184 (265)
T cd06631         107 YTKQILDGVAYLHNNCVVHRDIKGNNVMLMP--NGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESG  184 (265)
T ss_pred             HHHHHHHHHHHHHhCCcccCCcCHHhEEECC--CCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCC
Confidence            4569999999999999999999999999975  4579999999886542111     11112234678999999999988


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCc
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEF 1104 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f 1104 (1310)
                      ++.++|+|||||++|+|++|..||...+.......+.......+......+.++.+|+.+++. ++.+|+++.+.+.|+|
T Consensus       185 ~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~  264 (265)
T cd06631         185 YGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF  264 (265)
T ss_pred             CcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence            999999999999999999999999876654443333332222333445678999999999885 6788999999999998


Q ss_pred             c
Q psy5279        1105 W 1105 (1310)
Q Consensus      1105 ~ 1105 (1310)
                      +
T Consensus       265 ~  265 (265)
T cd06631         265 L  265 (265)
T ss_pred             C
Confidence            5

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.92  E-value=1.7e-24  Score=233.19  Aligned_cols=149  Identities=28%  Similarity=0.471  Sum_probs=135.3

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .+.|++.+.||+|+||.||+|..+.+++.||+|.+.....  .+.+.+|+.+++.++||||+++++.+.....+|+++||
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence            3678999999999999999999999999999999875432  56788999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +++++|.+.+... ..+++..+..++.|++.||.|||+.||+||||+|+||+++.++  .+||+|||++..+..
T Consensus        80 ~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~--~~~l~dfg~~~~~~~  151 (256)
T cd06612          80 CGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEG--QAKLADFGVSGQLTD  151 (256)
T ss_pred             CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCC--cEEEcccccchhccc
Confidence            9999999988653 4589999999999999999999999999999999999998655  799999999987654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.92  E-value=2.5e-25  Score=246.11  Aligned_cols=99  Identities=28%  Similarity=0.387  Sum_probs=75.5

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC--CCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE--PIF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~--~ys 1027 (1310)
                      .++.||+.||.|||++|++||||||+|||++.  ++.+||+|||++...............|++.|+|||.+...  .++
T Consensus       109 ~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  186 (290)
T cd05613         109 IYSGEIVLALEHLHKLGIIYRDIKLENILLDS--NGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHD  186 (290)
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCHHHeEECC--CCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCC
Confidence            34569999999999999999999999999985  46799999999865432221111223456789999987653  456


Q ss_pred             CccchhHHHHHHHHHhcCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      .++|+|||||++|+|++|..||.
T Consensus       187 ~~~Dv~slG~~l~~ll~g~~p~~  209 (290)
T cd05613         187 KAVDWWSMGVLMYELLTGASPFT  209 (290)
T ss_pred             ccccHHHHHHHHHHHhcCCCCCC
Confidence            77888888888888888887763

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.92  E-value=2.4e-25  Score=241.73  Aligned_cols=147  Identities=19%  Similarity=0.338  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||+|||++|++||||||+||+++.  +..+||+|||++...............++..|+|||.+.+..++.+
T Consensus       107 ~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  184 (261)
T cd05072         107 DFSAQIAEGMAYIERKNYIHRDLRAANVLVSE--SLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK  184 (261)
T ss_pred             HHHHHHHHHHHHHHHCCeeccccchhhEEecC--CCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChh
Confidence            34679999999999999999999999999985  4579999999987654322211122234567999999998889999


Q ss_pred             cchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1030 TDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1030 sDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +|+|||||++|+|++ |..||.+.........+... ...+ ....++.+..+++.+|+. ++.+|+++.+.+
T Consensus       185 ~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~  255 (261)
T cd05072         185 SDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG-YRMP-RMENCPDELYDIMKTCWKEKAEERPTFDYLQ  255 (261)
T ss_pred             hhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CCCC-CCCCCCHHHHHHHHHHccCCcccCcCHHHHH
Confidence            999999999999998 99999988776665554432 2222 224577899999999886 567788887654

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG1989|consensus

Probab=99.92  E-value=1.2e-25  Score=275.20  Aligned_cols=85  Identities=21%  Similarity=0.458  Sum_probs=70.6

Q ss_pred             cchhhc---ccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccccchhccCHHHHHHHHHhhhcCCC
Q psy5279        1143 QAPEVL---AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPG 1219 (1310)
Q Consensus      1143 qAPEVl---~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~ 1219 (1310)
                      -|||++   .+.+++.++|||+||||+|-|+....||.....    ..|..++|.||.+ +..|...++||+.||+.||.
T Consensus       222 RsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~Y~~P~~-p~ys~~l~~LI~~mL~~nP~  296 (738)
T KOG1989|consen  222 RSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGNYSFPPF-PNYSDRLKDLIRTMLQPNPD  296 (738)
T ss_pred             cChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEeccccCCCC-ccHHHHHHHHHHHHhccCcc
Confidence            456655   356788889999999999999999999976544    4688899999864 67899999999999999999


Q ss_pred             CCCCHHHhhcCCc
Q psy5279        1220 KRPTVEECHENRW 1232 (1310)
Q Consensus      1220 kRpTa~e~L~HpW 1232 (1310)
                      +||++.|++++-.
T Consensus       297 ~RPnI~Qv~~~~~  309 (738)
T KOG1989|consen  297 ERPNIYQVLEEIF  309 (738)
T ss_pred             cCCCHHHHHHHHH
Confidence            9999999987644

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.92  E-value=4.4e-25  Score=240.83  Aligned_cols=148  Identities=21%  Similarity=0.320  Sum_probs=114.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||.|||++|++||||||+|||++.  +..+||+|||++...............+++.|+|||.+.+..++.+
T Consensus       108 ~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~--~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  185 (263)
T cd05052         108 YMATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK  185 (263)
T ss_pred             HHHHHHHHHHHHHHhCCEeecccCcceEEEcC--CCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCch
Confidence            45679999999999999999999999999975  4569999999987654322111111223467999999999999999


Q ss_pred             cchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1030 TDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1030 sDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +|||||||++|+|++ |..||.+.+..+....+... ++. .....++.++.+++.+++. +|.+|+++.+.++
T Consensus       186 ~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         186 SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG-YRM-ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CCC-CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            999999999999998 99999988776665555432 111 1234578899999999987 5678998887653

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.92  E-value=2.7e-25  Score=241.58  Aligned_cols=149  Identities=23%  Similarity=0.332  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+||+++.  ++.+||+|||+++..............++..|+|||.+.+..++.
T Consensus       103 ~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~  180 (256)
T cd05059         103 LDMCSDVCEAMEYLESNGFIHRDLAARNCLVGE--DNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSS  180 (256)
T ss_pred             HHHHHHHHHHHHHHHHCCcccccccHhhEEECC--CCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCc
Confidence            345679999999999999999999999999985  456999999998754322111111111234799999999999999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++|+|||||++|+|++ |..||.+.+..+....+... ... ......+.+..+++.+|+. ++.+|+++.+++.
T Consensus       181 ~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~  253 (256)
T cd05059         181 KSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-YRL-YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLS  253 (256)
T ss_pred             hhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-CcC-CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            9999999999999998 89999887776665555432 111 1224578899999999886 6778999888764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.92  E-value=1.7e-25  Score=245.22  Aligned_cols=147  Identities=16%  Similarity=0.243  Sum_probs=113.0

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||+|||++|++||||||+|||++.  +..+|++|||.+.............+.+++.|+|||++.+..++.+
T Consensus       111 ~~~~~i~~al~~lH~~~iiH~dikp~nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  188 (266)
T cd05064         111 GMLPGLASGMKYLSEMGYVHKGLAAHKVLVNS--DLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSA  188 (266)
T ss_pred             HHHHHHHHHHHHHHHCCEeeccccHhhEEEcC--CCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccch
Confidence            35679999999999999999999999999975  5579999999875432211112223344578999999999999999


Q ss_pred             cchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1030 TDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1030 sDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +|||||||++|+|++ |..||.+.+..+....+.... ..+ ....++....+++..++. ++.+|++..+++
T Consensus       189 ~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~  259 (266)
T cd05064         189 SDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF-RLP-APRNCPNLLHQLMLDCWQKERGERPRFSQIH  259 (266)
T ss_pred             hHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC-CCC-CCCCCCHHHHHHHHHHcCCCchhCCCHHHHH
Confidence            999999999999775 999999888777666554331 222 234577889999998886 567788887654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.92  E-value=1.4e-24  Score=236.25  Aligned_cols=146  Identities=25%  Similarity=0.471  Sum_probs=130.5

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc------chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN------QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~------~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      +|.+.+.||+|+||.||+|.. .+|+.+|+|.+.....      .....+.+|+.+|+.++||||+++++++...+.+++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence            477889999999999999975 5889999999864321      122457889999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ||||++|++|.+.+.+...+++..+..++.|++.||+|||+.||+|+||||+|||+++++  .+||+|||+++..
T Consensus        80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~~l~dfg~~~~~  152 (265)
T cd06631          80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG--IIKLIDFGCARRL  152 (265)
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCC--eEEeccchhhHhh
Confidence            999999999999998777899999999999999999999999999999999999998655  7999999999865

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.92  E-value=2.7e-24  Score=238.47  Aligned_cols=151  Identities=28%  Similarity=0.440  Sum_probs=128.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-----
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-----  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-----  253 (1310)
                      .-++|++.+.||+|+||.||+|.+..+|+.||||.+....  ......+.+|+.++++++||||+++++++...+     
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR   89 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence            3467999999999999999999999999999999886432  222344668999999999999999999987654     


Q ss_pred             ---eEEEEEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         254 ---SFTIISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       254 ---~lyLVmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                         ..++||||+.+ +|...+.... .+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||++
T Consensus        90 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~--~~kl~dfg~~  166 (310)
T cd07865          90 YKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDG--ILKLADFGLA  166 (310)
T ss_pred             CCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCC--cEEECcCCCc
Confidence               45999999975 6776665443 589999999999999999999999999999999999998655  7999999999


Q ss_pred             eeecC
Q psy5279         330 RRITS  334 (1310)
Q Consensus       330 r~i~~  334 (1310)
                      +....
T Consensus       167 ~~~~~  171 (310)
T cd07865         167 RAFSL  171 (310)
T ss_pred             ccccC
Confidence            87643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.92  E-value=2e-24  Score=235.96  Aligned_cols=148  Identities=28%  Similarity=0.467  Sum_probs=131.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-----chHHHHHHHHHHHHhcCCCCcceEEEEEEe--CCeEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-----QYKSLFKNELDIMNQLCHRNLVRLHDSYET--KDSFT  256 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-----~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~--~~~ly  256 (1310)
                      .|...+.||+|+||.||+|.+..+|+.||+|++.....     .....+.+|+.+|+.++||||+++++++..  ...++
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT   82 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence            57889999999999999999999999999998864321     223457889999999999999999999876  36789


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ++|||+++++|.+.+...+.+++.....++.|++.||+|||++||+||||||+|||++.++  .+||+|||+++.+.
T Consensus        83 l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~--~~~l~dfg~~~~~~  157 (266)
T cd06651          83 IFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAG--NVKLGDFGASKRLQ  157 (266)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC--CEEEccCCCccccc
Confidence            9999999999999998777799999999999999999999999999999999999997654  79999999998653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.1e-24  Score=234.03  Aligned_cols=151  Identities=26%  Similarity=0.446  Sum_probs=133.0

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCC------
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKD------  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~------  253 (1310)
                      ..++|++.+.||+|+||.||+|.++.+++.+|+|++..... ..+.+.+|+.+++++ +||||++++++|....      
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            45889999999999999999999999999999999875433 345688999999999 7999999999997655      


Q ss_pred             eEEEEEecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         254 SFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                      .+|+||||+++++|.+.+..    ...+++..+..++.|++.||.|||++||+|+||+|+||+++.++  .+||+|||++
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~--~~~l~d~~~~  160 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNA--EVKLVDFGVS  160 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCC--eEEECCCccc
Confidence            48999999999999887754    34689999999999999999999999999999999999998654  7999999999


Q ss_pred             eeecC
Q psy5279         330 RRITS  334 (1310)
Q Consensus       330 r~i~~  334 (1310)
                      .....
T Consensus       161 ~~~~~  165 (275)
T cd06608         161 AQLDS  165 (275)
T ss_pred             eeccc
Confidence            87543

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.91  E-value=7.4e-25  Score=235.84  Aligned_cols=154  Identities=24%  Similarity=0.411  Sum_probs=122.0

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-------ccccCCCCCCccccccccc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-------LIHPINTPNPEFAAPEVLA 1022 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-------~~~~~~tGtp~Y~APEvl~ 1022 (1310)
                      .++.||+.||.|||++|++|+||+|+||+++.  +..+||+|||++........       .......+++.|+|||.+.
T Consensus        97 ~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~  174 (265)
T cd05579          97 IYIAEIVLALEYLHSNGIIHRDLKPDNILIDS--NGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVIL  174 (265)
T ss_pred             HHHHHHHHHHHHHHHcCeecCCCCHHHeEEcC--CCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhc
Confidence            34679999999999999999999999999986  45699999998764432211       1122234567899999998


Q ss_pred             CCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcH---Hh
Q psy5279        1023 EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITL---AN 1098 (1310)
Q Consensus      1023 ~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~---~e 1098 (1310)
                      ...++.++|+|||||++|+|++|..||......+....+......++... .++.++.+|+.+|+. ++..|+++   .+
T Consensus       175 ~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~  253 (265)
T cd05579         175 GQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDV-EVSDEAIDLISKLLVPDPEKRLGAKSIEE  253 (265)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccc-cCCHHHHHHHHHHhcCCHhhcCCCccHHH
Confidence            88888999999999999999999999998887777666655444443321 258899999999886 56678888   89


Q ss_pred             hhCCCccc
Q psy5279        1099 NIDHEFWH 1106 (1310)
Q Consensus      1099 ~L~H~f~~ 1106 (1310)
                      .+.|+||.
T Consensus       254 ~l~~~~~~  261 (265)
T cd05579         254 IKNHPFFK  261 (265)
T ss_pred             HhcCcccc
Confidence            99999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.91  E-value=7.8e-25  Score=246.81  Aligned_cols=98  Identities=30%  Similarity=0.464  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc---CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA---EEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~---~~~ 1025 (1310)
                      ..++.||+.||.|||++||+|+||||+||+++.  +..+||+|||++......     ....+++.|+|||.+.   ...
T Consensus       124 ~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~--~~~~kL~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~  196 (313)
T cd06633         124 AAITHGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGSASKSSPA-----NSFVGTPYWMAPEVILAMDEGQ  196 (313)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCChhhEEECC--CCCEEEeecCCCcccCCC-----CCccccccccChhhccccCCCC
Confidence            345779999999999999999999999999975  456999999987543211     2234678899999984   355


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++.++|+|||||++|+|++|..||.+.+
T Consensus       197 ~~~~sDv~slGvil~el~~g~~p~~~~~  224 (313)
T cd06633         197 YDGKVDVWSLGITCIELAERKPPLFNMN  224 (313)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            7889999999999999999999997653

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.91  E-value=3.1e-24  Score=234.41  Aligned_cols=145  Identities=30%  Similarity=0.465  Sum_probs=129.7

Q ss_pred             eceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCCch
Q psy5279         188 GDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGEL  267 (1310)
Q Consensus       188 ~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GGeL  267 (1310)
                      ...||+|+||.||+|.++.++..||+|.+..........+.+|+.+++.++||||+++++++..++.+++||||++|++|
T Consensus        13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   92 (268)
T cd06624          13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSL   92 (268)
T ss_pred             eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCH
Confidence            35799999999999999999999999998766555566788999999999999999999999999999999999999999


Q ss_pred             HHHhhhc-CCC--CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         268 LHSLTRQ-SYY--TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       268 ~~~l~~~-~~l--sE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .+.+... ..+  ++..+..++.||+.||.|||++||+||||||+|||++.+. ..+||+|||++..+.
T Consensus        93 ~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~-~~~~l~dfg~~~~~~  160 (268)
T cd06624          93 SALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYS-GVVKISDFGTSKRLA  160 (268)
T ss_pred             HHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC-CeEEEecchhheecc
Confidence            9988754 345  7888999999999999999999999999999999997533 479999999998664

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.91  E-value=2.9e-25  Score=243.96  Aligned_cols=151  Identities=15%  Similarity=0.259  Sum_probs=118.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||++........ .......+++.|+|||.+.+..+
T Consensus       126 ~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~--~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  203 (283)
T cd05048         126 FLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE--GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKF  203 (283)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeccccccceEEEcC--CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcC
Confidence            3456789999999999999999999999999975  45699999999875432211 11122234678999999998889


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|+|||||++|+|++ |..||.+.+..+....+.....  +.....++++..+++..++. ++.+|+++.+++.+
T Consensus       204 ~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         204 TTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQL--LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             chhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999999998 9999999888777766654322  12235678999999999887 56789998887643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.91  E-value=1.7e-24  Score=233.34  Aligned_cols=150  Identities=21%  Similarity=0.378  Sum_probs=134.5

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .|.+.+.||+|+||.||+|.++.+|+.||+|.+....  ......+.+|+.+|+.++||||+++++++...+..|+||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            3788899999999999999999999999999986532  33456688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         262 AGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       262 ~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ++|++|.+.+...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++  .+||+|||+++.+...
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~--~~~l~df~~~~~~~~~  154 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYD--NVKIGDLGVAKLLSDN  154 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCC--CEEEcccccceeccCc
Confidence            9999999988653  4589999999999999999999999999999999999998655  7999999999977543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.91  E-value=1.2e-24  Score=247.19  Aligned_cols=151  Identities=27%  Similarity=0.469  Sum_probs=132.3

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEe----CCe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYET----KDS  254 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~----~~~  254 (1310)
                      +.+.|++.+.||+|+||.||+|.++.+|+.||+|++.....  .....+.+|+.+|+.++||||++++++|..    ...
T Consensus         3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   82 (334)
T cd07855           3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD   82 (334)
T ss_pred             hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence            45789999999999999999999999999999999875422  334557789999999999999999998863    357


Q ss_pred             EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         255 FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +|+||||+. |+|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        83 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~~kl~dfg~~~~~~~  159 (334)
T cd07855          83 VYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDC--ELRIGDFGMARGLSS  159 (334)
T ss_pred             EEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--cEEecccccceeecc
Confidence            899999996 58888887777799999999999999999999999999999999999998655  799999999987643

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0986|consensus

Probab=99.91  E-value=1.4e-24  Score=248.71  Aligned_cols=229  Identities=18%  Similarity=0.269  Sum_probs=161.0

Q ss_pred             cchhhhhhhcc-cCCC-chhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEEEEeccCCCcceeeecccCCccccc
Q psy5279         860 DTYTLRRLRHE-IGTR-PEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCY  937 (1310)
Q Consensus       860 ~~~~~~~l~~e-~~~~-~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~  937 (1310)
                      +-||+|+|-+. ++.+ .......|++|.++...  +|.+-+-.-.+-.....             ++--+.+|+++..-
T Consensus       211 KMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s--~FiVslaYAfeTkd~LC-------------lVLtlMNGGDLkfH  275 (591)
T KOG0986|consen  211 KMYACKKLDKKRIKKRKGETMALNEKQILEKVSS--PFIVSLAYAFETKDALC-------------LVLTLMNGGDLKFH  275 (591)
T ss_pred             hhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhcc--CcEEEEeeeecCCCceE-------------EEEEeecCCceeEE
Confidence            44677766644 4333 33455588888887653  34332222111111111             23334455555544


Q ss_pred             ccc---cCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCc
Q psy5279         938 LPI---VIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014 (1310)
Q Consensus       938 L~~---~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~ 1014 (1310)
                      +-.   ....+..+.+++.+|++||++||.++||.|||||+|||+++  .++|+|+|+|+|..+......  ....||..
T Consensus       276 iyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd--~GhvRISDLGLAvei~~g~~~--~~rvGT~G  351 (591)
T KOG0986|consen  276 IYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDD--HGHVRISDLGLAVEIPEGKPI--RGRVGTVG  351 (591)
T ss_pred             eeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeecc--CCCeEeeccceEEecCCCCcc--ccccCccc
Confidence            422   24567788999999999999999999999999999999986  567999999999887653332  22378899


Q ss_pred             ccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChh----HHHhhhccccccccccchhccHHHHHHHHHhccCC
Q psy5279        1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP----ETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHE 1090 (1310)
Q Consensus      1015 Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~----e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~ 1090 (1310)
                      |||||++.++.|+.++|+|||||++|+|+.|+.||....+.    ++.+.+.....+++   ...|++|++++..+|..+
T Consensus       352 YMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~---~kFS~eakslc~~LL~Kd  428 (591)
T KOG0986|consen  352 YMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS---DKFSEEAKSLCEGLLTKD  428 (591)
T ss_pred             ccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc---cccCHHHHHHHHHHHccC
Confidence            99999999999999999999999999999999999875443    33444444444444   578999999999888654


Q ss_pred             -cchh-----cHHhhhCCCccccccc
Q psy5279        1091 -VDWI-----TLANNIDHEFWHVKDL 1110 (1310)
Q Consensus      1091 -~~ri-----t~~e~L~H~f~~~~~l 1110 (1310)
                       .+|.     ...+...|+||...+.
T Consensus       429 p~~RLGcrg~ga~evk~HpfFk~lnw  454 (591)
T KOG0986|consen  429 PEKRLGCRGEGAQEVKEHPFFKDLNW  454 (591)
T ss_pred             HHHhccCCCcCcchhhhCcccccCCH
Confidence             4443     4467788999886444

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=3.8e-25  Score=241.42  Aligned_cols=151  Identities=24%  Similarity=0.320  Sum_probs=119.3

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC--cccccCCCCCCcccccccccCCCCCC
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG--TLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g--~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ++.||+.||.|||++|++||||||+||+++.  +..++|+|||+++......  ........+++.|+|||.+.+..++.
T Consensus       111 ~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  188 (264)
T cd06653         111 YTRQILQGVSYLHSNMIVHRDIKGANILRDS--AGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGR  188 (264)
T ss_pred             HHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCc
Confidence            4569999999999999999999999999975  4569999999987543210  00111234678899999999888899


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEF 1104 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f 1104 (1310)
                      ++|+|||||++|+|++|..||...........+.... ..+.....+++++++++.+++..+..|++..+.+.|+|
T Consensus       189 ~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~i~~~l~~~~~r~~~~~~~~~~~  263 (264)
T cd06653         189 KADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQP-TKPMLPDGVSDACRDFLKQIFVEEKRRPTAEFLLRHPF  263 (264)
T ss_pred             cccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCC-CCCCCCcccCHHHHHHHHHHhcCcccCccHHHHhcCCC
Confidence            9999999999999999999998776555444333221 12234467889999999999998899999999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.91  E-value=4.1e-24  Score=238.96  Aligned_cols=144  Identities=24%  Similarity=0.439  Sum_probs=118.6

Q ss_pred             eceecccCceEEEEEEEcC--CCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEE--eCCeEEEEEecCC
Q psy5279         188 GDELGRGVTGIVYHAVERS--SGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE--TKDSFTIISELAG  263 (1310)
Q Consensus       188 ~~~LG~GsFG~Vyka~~k~--Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~--~~~~lyLVmEy~~  263 (1310)
                      ..+||+|+||.||+|..+.  +++.||+|.+....  ....+.+|+.+|+.++||||++++++|.  ....+++||||+.
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            4679999999999999764  66899999986543  2345678999999999999999999985  4567899999988


Q ss_pred             CCchHHHhhh---------cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC--CCCeEEEEeeccceee
Q psy5279         264 GGELLHSLTR---------QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP--GGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       264 GGeL~~~l~~---------~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~--~~~~VKLsDFGLAr~i  332 (1310)
                      + +|.+.+..         ...+++..+..++.||+.||.|||++||+||||||+|||+..+  ....+||+|||+|+.+
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07867          84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence            6 56655531         1248899999999999999999999999999999999999532  2347999999999876


Q ss_pred             cC
Q psy5279         333 TS  334 (1310)
Q Consensus       333 ~~  334 (1310)
                      ..
T Consensus       163 ~~  164 (317)
T cd07867         163 NS  164 (317)
T ss_pred             CC
Confidence            43

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.91  E-value=2.6e-24  Score=236.07  Aligned_cols=149  Identities=23%  Similarity=0.327  Sum_probs=125.4

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHH-HHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDI-MNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~I-L~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      +.|++.+.||+|+||.||+|.++.+|+.||+|.++.... .....+..|+.+ ++.++|||||++++++..++.+|+|||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            468899999999999999999999999999999875432 223345556665 677899999999999999999999999


Q ss_pred             cCCCCchHHHhh----hcCCCCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         261 LAGGGELLHSLT----RQSYYTEYDIAHYIRQLLSGLDYMHRL-SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       261 y~~GGeL~~~l~----~~~~lsE~~i~~ii~QIl~GL~YLHs~-gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |++| +|.+.+.    ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++  .+||+|||+++.+..
T Consensus        81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~--~~kl~dfg~~~~~~~  156 (283)
T cd06617          81 VMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG--QVKLCDFGISGYLVD  156 (283)
T ss_pred             hhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC--CEEEeeccccccccc
Confidence            9984 5554443    234689999999999999999999997 999999999999998655  799999999987643

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.91  E-value=3.3e-24  Score=237.27  Aligned_cols=151  Identities=24%  Similarity=0.407  Sum_probs=131.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeC-----C
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETK-----D  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~-----~  253 (1310)
                      ...+.|.+.+.||+|+||.||+|....+++.+|+|++.... .....+.+|+.+++++ +||||++++++|...     +
T Consensus        19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   97 (291)
T cd06639          19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGG   97 (291)
T ss_pred             CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCC
Confidence            45688999999999999999999999999999999986432 2345677899999999 899999999998754     3


Q ss_pred             eEEEEEecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         254 SFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                      .+|+||||++||+|.+.+..    ...+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||++
T Consensus        98 ~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~--~~kl~dfg~~  175 (291)
T cd06639          98 QLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEG--GVKLVDFGVS  175 (291)
T ss_pred             eeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC--CEEEeecccc
Confidence            58999999999999887742    34689999999999999999999999999999999999998655  6999999999


Q ss_pred             eeec
Q psy5279         330 RRIT  333 (1310)
Q Consensus       330 r~i~  333 (1310)
                      +.+.
T Consensus       176 ~~~~  179 (291)
T cd06639         176 AQLT  179 (291)
T ss_pred             hhcc
Confidence            8754

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.91  E-value=4e-24  Score=236.32  Aligned_cols=149  Identities=25%  Similarity=0.390  Sum_probs=127.7

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcC-CCCcceEEEEEEeCCe-----
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLC-HRNLVRLHDSYETKDS-----  254 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~~-----  254 (1310)
                      +.|++.+.||+|+||.||+|.+..+|+.||+|.+.....  .....+.+|+.+++.+. ||||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            468999999999999999999999999999998865322  23356778999999995 6999999999988776     


Q ss_pred             EEEEEecCCCCchHHHhhhc-----CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         255 FTIISELAGGGELLHSLTRQ-----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~-----~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                      +|+||||+.+ +|.+.+...     ..+++..+..++.||+.||.|||++||+||||||+|||++.+ +..+||+|||++
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~-~~~~kl~dfg~~  158 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ-KGLLKIADLGLG  158 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecC-CCeEEEeecccc
Confidence            8999999996 677776432     347999999999999999999999999999999999999862 247999999999


Q ss_pred             eeec
Q psy5279         330 RRIT  333 (1310)
Q Consensus       330 r~i~  333 (1310)
                      +.+.
T Consensus       159 ~~~~  162 (295)
T cd07837         159 RAFS  162 (295)
T ss_pred             eecC
Confidence            8653

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.91  E-value=3.7e-25  Score=247.77  Aligned_cols=151  Identities=21%  Similarity=0.304  Sum_probs=116.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.|++.||+|||++|++||||||+|||++.  +..+||+|||++........ .....+.+++.|+|||++.+..+
T Consensus       142 ~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~--~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  219 (307)
T cd05098         142 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY  219 (307)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccccccHHheEEcC--CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCC
Confidence            3456789999999999999999999999999975  45799999999865432111 11122334568999999998889


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|+|||||++|+|++ |..||.+....+....+.... .. .....++.+.++++.+++. ++.+|+++.+++.+
T Consensus       220 ~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         220 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RM-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCC-CC-CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            999999999999999998 999998877766655554332 11 2234578899999999887 56789998887643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.91  E-value=5.5e-24  Score=230.32  Aligned_cols=149  Identities=29%  Similarity=0.469  Sum_probs=135.9

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~--~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|.+.+.||+|+||.||+|.+..+++.||+|.+......  ....+.+|+.+++.++||||+++++++...+.+++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            588999999999999999999999999999998765432  456788999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +++++|.+.+.....+++..+..++.|++.||.|||++||+||||||+||+++.++  .+||+|||++.....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~--~~kl~d~g~~~~~~~  151 (264)
T cd06626          81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG--VIKLGDFGCAVKLKN  151 (264)
T ss_pred             CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEcccccccccCC
Confidence            99999999988776789999999999999999999999999999999999998644  799999999987643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.91  E-value=9.4e-24  Score=227.47  Aligned_cols=151  Identities=24%  Similarity=0.372  Sum_probs=134.6

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+....  ......+.+|+.+|+.++||||+++++.+..++.+++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            4889999999999999999999999999999987543  23455688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         262 AGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       262 ~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ++|++|.+.+...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++ ..+||+|||+++.....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~-~~~~l~d~~~~~~~~~~  155 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHK-MVVKIGDFGISKILSSK  155 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-CEEEEccCCCceecCCC
Confidence            9999999998754  2489999999999999999999999999999999999997543 46899999999877543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.91  E-value=8.9e-24  Score=228.21  Aligned_cols=149  Identities=25%  Similarity=0.462  Sum_probs=131.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEe-CCeEEEEEe
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYET-KDSFTIISE  260 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~-~~~lyLVmE  260 (1310)
                      .|++.+.||+|+||.||++.++.+++.||+|.+.....  ...+.+.+|+.++++++|||++++++.+.. ...+|+|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            48899999999999999999999999999999875432  344568899999999999999999998874 446899999


Q ss_pred             cCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         261 LAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       261 y~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+++++|.+.+...  ..+++.++..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++.+..
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~--~~~l~df~~~~~~~~  154 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTN--IIKVGDLGIARVLEN  154 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCC--cEEEecccceEEecc
Confidence            99999999888653  3489999999999999999999999999999999999998654  799999999987754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.91  E-value=6.5e-24  Score=229.56  Aligned_cols=149  Identities=23%  Similarity=0.351  Sum_probs=134.5

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|+..+.||+|+||.||.+.+..+++.+++|.+....  ......+.+|+.+|++++||||+++++++...+.+++||||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            5889999999999999999999999999999986543  33445678999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+||+|.+.+...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++  .+||+|||+++....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~--~~kl~d~~~~~~~~~  153 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG--LIKLGDFGISKILGS  153 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCC--CEEECcCcceEEccc
Confidence            9999999988764  4589999999999999999999999999999999999998655  799999999987644

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.91  E-value=1.6e-24  Score=237.96  Aligned_cols=150  Identities=25%  Similarity=0.434  Sum_probs=133.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      +.|++.+.||+|+||.||+|.+..+++.||+|++.....  ...+.+.+|+.+|+.++||||+++++++..++..|+|||
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            468899999999999999999999999999998764322  234567889999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+.++.|.........+++..+..++.||+.||.|||++||+||||||+||+++.++  .+||+|||+++.+..
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~--~~~l~dfg~~~~~~~  152 (286)
T cd07846          81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSG--VVKLCDFGFARTLAA  152 (286)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--cEEEEeeeeeeeccC
Confidence            999998887766555699999999999999999999999999999999999998655  799999999987644

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.91  E-value=2.8e-25  Score=240.46  Aligned_cols=148  Identities=22%  Similarity=0.326  Sum_probs=116.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+|+||||+|||++.  +..++|+|||++......+.. .....+++.|+|||++.+..++.
T Consensus       103 ~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~--~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  179 (255)
T cd08219         103 LQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQ--NGKVKLGDFGSARLLTSPGAY-ACTYVGTPYYVPPEIWENMPYNN  179 (255)
T ss_pred             HHHHHHHHHHHHHHhhCCcccCCCCcceEEECC--CCcEEEcccCcceeecccccc-cccccCCccccCHHHHccCCcCc
Confidence            345679999999999999999999999999975  456999999998765432221 12234678899999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++|+|||||++|+|++|..||...+.......+......  .....++.+.++++.+|+. +|.+|+++.+++.
T Consensus       180 ~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  251 (255)
T cd08219         180 KSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYK--PLPSHYSYELRSLIKQMFKRNPRSRPSATTILS  251 (255)
T ss_pred             hhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCC--CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence            999999999999999999999987766665555433222  2234578889999998886 6677888887654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.91  E-value=5.5e-25  Score=241.37  Aligned_cols=156  Identities=21%  Similarity=0.334  Sum_probs=116.1

Q ss_pred             HHHHHHHHHHHHHHHHHC-CceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC---
Q psy5279         948 DAYCVTSVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE--- 1023 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~-gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~--- 1023 (1310)
                      +..++.||+.||+|||++ +++||||||+|||++.  +..+||+|||++.......  ......+++.|+|||.+.+   
T Consensus       105 ~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~--~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~  180 (283)
T cd06617         105 LGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINR--NGQVKLCDFGISGYLVDSV--AKTIDAGCKPYMAPERINPELN  180 (283)
T ss_pred             HHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC--CCCEEEeeccccccccccc--ccccccCCccccChhhcCCccc
Confidence            345677999999999998 9999999999999975  4579999999987543211  1122346688999999865   


Q ss_pred             -CCCCCccchhHHHHHHHHHhcCCCCCCCCC-hhHHHhh-hccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhh
Q psy5279        1024 -EPIFPQTDVWSAGVLAYVLLSGASPFRGQS-EPETRQN-VNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANN 1099 (1310)
Q Consensus      1024 -~~ys~ksDIWSLGViLyeLLtG~~PF~g~~-~~e~~~~-I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~ 1099 (1310)
                       ..++.++|+|||||++|+|++|..||.... ..+.... +......++  ...++++.++|+.+|+. ++.+|+++.++
T Consensus       181 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~i  258 (283)
T cd06617         181 QKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLP--AEKFSPEFQDFVNKCLKKNYKERPNYPEL  258 (283)
T ss_pred             ccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCC--ccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence             456889999999999999999999997532 2222222 211111121  23468899999999885 67789999999


Q ss_pred             hCCCcccccc
Q psy5279        1100 IDHEFWHVKD 1109 (1310)
Q Consensus      1100 L~H~f~~~~~ 1109 (1310)
                      +.|+|+....
T Consensus       259 l~~~~~~~~~  268 (283)
T cd06617         259 LQHPFFELHL  268 (283)
T ss_pred             hcCchhhhcc
Confidence            9999987543

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.91  E-value=2.5e-24  Score=236.29  Aligned_cols=151  Identities=25%  Similarity=0.414  Sum_probs=134.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|++.+.||+|+||.||+|.++.+++.||+|.+....  ......+.+|+++|++++||||+++++++...+..|+|||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            46899999999999999999999999999999886532  2345678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |+.++.+.........+++.++..++.||+.||.|||++||+||||||+||+++.++  .+||+|||+++.+...
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~--~~kl~d~g~~~~~~~~  153 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESG--VLKLCDFGFARALRAR  153 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEEeeecccccCCC
Confidence            999877776666656699999999999999999999999999999999999998654  7999999999876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.91  E-value=1e-23  Score=228.08  Aligned_cols=150  Identities=25%  Similarity=0.449  Sum_probs=134.8

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|++.+.||.|+||.||+|....++..+|+|++.... ......+.+|+.+|+.++||||+++++.+...+..|+|||+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            46899999999999999999999999999999987543 23456688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc---CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ---SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~---~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++|++|.+.+...   ..+++..+..++.|++.||.|||++||+||||||+||++++++  .+||+|||++..+..
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~--~~~l~df~~~~~~~~  154 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG--SVKIADFGVSASLAD  154 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC--CEEEcccchHHHhcc
Confidence            9999999998653   4589999999999999999999999999999999999998654  799999999987654

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.91  E-value=4.9e-24  Score=234.58  Aligned_cols=152  Identities=25%  Similarity=0.432  Sum_probs=131.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEE-----eCC
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYE-----TKD  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~-----~~~  253 (1310)
                      ...++|++.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++.+ +||||+++++++.     ..+
T Consensus        15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~   93 (286)
T cd06638          15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGD   93 (286)
T ss_pred             CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCC
Confidence            46788999999999999999999999999999999876432 2335677899999999 6999999999884     446


Q ss_pred             eEEEEEecCCCCchHHHhh----hcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         254 SFTIISELAGGGELLHSLT----RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~----~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                      .+|+||||++||+|.+.+.    ....+++..+..++.|++.||.|||+++|+||||||+|||++.++  .+||+|||++
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~--~~kl~dfg~~  171 (286)
T cd06638          94 QLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEG--GVKLVDFGVS  171 (286)
T ss_pred             eEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCC--CEEEccCCce
Confidence            7999999999999988764    234588999999999999999999999999999999999998765  6999999999


Q ss_pred             eeecC
Q psy5279         330 RRITS  334 (1310)
Q Consensus       330 r~i~~  334 (1310)
                      +.+..
T Consensus       172 ~~~~~  176 (286)
T cd06638         172 AQLTS  176 (286)
T ss_pred             eeccc
Confidence            87643

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.91  E-value=7.1e-25  Score=244.78  Aligned_cols=151  Identities=29%  Similarity=0.463  Sum_probs=134.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ...+.|.....||+|+||.||++.+..+++.||||.+........+.+.+|+.+++.++||||+++++.|...+..|+||
T Consensus        19 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~   98 (292)
T cd06658          19 DPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM   98 (292)
T ss_pred             chHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence            44566666788999999999999999999999999987655455667889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ||++|++|.+.+.. +.+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||++..+.
T Consensus        99 e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kL~dfg~~~~~~  169 (292)
T cd06658          99 EFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG--RIKLSDFGFCAQVS  169 (292)
T ss_pred             eCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEEccCcchhhcc
Confidence            99999999887754 4689999999999999999999999999999999999998654  79999999997653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.91  E-value=6.9e-25  Score=242.28  Aligned_cols=99  Identities=27%  Similarity=0.385  Sum_probs=80.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .++.||+.||+|||++||+||||||+|||++.  +..+||+|||++.........  ......++..|+|||++.+..++
T Consensus       113 ~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~  190 (284)
T cd05079         113 KYAVQICKGMDYLGSRQYVHRDLAARNVLVES--EHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFY  190 (284)
T ss_pred             HHHHHHHHHHHHHHHCCeeecccchheEEEcC--CCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCC
Confidence            35679999999999999999999999999975  456999999998755322211  11223455679999999988899


Q ss_pred             CccchhHHHHHHHHHhcCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      .++|||||||++|+|++|..|+.
T Consensus       191 ~~~Di~slG~il~ellt~~~~~~  213 (284)
T cd05079         191 IASDVWSFGVTLYELLTYCDSES  213 (284)
T ss_pred             ccccchhhhhhhhhhhcCCCCCc
Confidence            99999999999999999877653

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.91  E-value=4.6e-24  Score=255.61  Aligned_cols=144  Identities=20%  Similarity=0.245  Sum_probs=128.0

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      ...|.+.+.||+|+||.||+|.+..+++.||||....      ..+.+|+.+|++|+|||||++++++...+..+||||+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            4579999999999999999999999999999996431      2356899999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +. ++|...+... ..+++..+..++.||+.||.|||++|||||||||+|||++.++  .+||+|||+|+.+..
T Consensus       242 ~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~--~vkL~DFGla~~~~~  312 (461)
T PHA03211        242 YR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPE--DICLGDFGAACFARG  312 (461)
T ss_pred             cC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCC--CEEEcccCCceeccc
Confidence            96 5787777653 4599999999999999999999999999999999999998654  799999999987643

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.91  E-value=9.4e-25  Score=245.30  Aligned_cols=97  Identities=28%  Similarity=0.431  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc---CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA---EEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~---~~~ 1025 (1310)
                      ..++.|++.||.|||++|++||||||+|||++.  ++.+||+|||++......     ....+++.|+|||.+.   ...
T Consensus       118 ~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~  190 (308)
T cd06634         118 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE--PGLVKLGDFGSASIMAPA-----NXFVGTPYWMAPEVILAMDEGQ  190 (308)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHhEEECC--CCcEEECCcccceeecCc-----ccccCCccccCHHHHhhcccCC
Confidence            345679999999999999999999999999975  467999999988654322     1234678999999975   345


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++.++|||||||++|+|++|..||...
T Consensus       191 ~~~~~Di~slG~il~el~~g~~p~~~~  217 (308)
T cd06634         191 YDGKVDVWSLGITCIELAERKPPLFNM  217 (308)
T ss_pred             CCcccchHHHHHHHHHHHcCCCCCccc
Confidence            778999999999999999999998643

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.91  E-value=1.1e-24  Score=236.13  Aligned_cols=146  Identities=20%  Similarity=0.346  Sum_probs=114.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  +..+||+|||++......... .....+++.|+|||.+.+..++.+
T Consensus       108 ~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~--~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~  184 (261)
T cd05148         108 DMACQVAEGMAYLEEQNSIHRDLAARNILVGE--DLVCKVADFGLARLIKEDVYL-SSDKKIPYKWTAPEAASHGTFSTK  184 (261)
T ss_pred             HHHHHHHHHHHHHHHCCeeccccCcceEEEcC--CceEEEccccchhhcCCcccc-ccCCCCceEecCHHHHccCCCCch
Confidence            45679999999999999999999999999985  457999999998755322111 112234567999999998889999


Q ss_pred             cchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1030 TDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1030 sDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +|+|||||++|+|++ |..||.+.+..+....+... +..+ .....+++..+++.+++. ++.+|+++.+.+
T Consensus       185 ~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~  255 (261)
T cd05148         185 SDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG-YRMP-CPAKCPQEIYKIMLECWAAEPEDRPSFKALR  255 (261)
T ss_pred             hhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC-CcCC-CCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            999999999999998 89999988777766665532 2222 234678899999999886 567898887755

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.91  E-value=9.4e-25  Score=241.29  Aligned_cols=100  Identities=29%  Similarity=0.391  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC--CC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP--IF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~--ys 1027 (1310)
                      .++.|++.||.|||+.|++||||||+||+++.  +..++|+|||++...............+++.|+|||.+.+..  .+
T Consensus       109 ~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  186 (288)
T cd05583         109 VYIAEIVLALDHLHQLGIIYRDIKLENILLDS--EGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHD  186 (288)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCc
Confidence            34569999999999999999999999999975  456999999998765332222222234678999999987664  67


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      .++|+||||+++|+|++|..||..
T Consensus       187 ~~~Dv~slG~il~el~tg~~p~~~  210 (288)
T cd05583         187 KAVDWWSLGVLTFELLTGASPFTV  210 (288)
T ss_pred             chhhhHHHHHHHHHHHhCCCCccc
Confidence            889999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.91  E-value=3.8e-24  Score=244.36  Aligned_cols=150  Identities=27%  Similarity=0.417  Sum_probs=131.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--------
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--------  252 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--------  252 (1310)
                      +..+|.+.+.||+|+||.||+|.++.+|+.||+|.+........+.+.+|+.+|++++||||+++++++...        
T Consensus         3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (342)
T cd07854           3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV   82 (342)
T ss_pred             cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence            568899999999999999999999999999999999766555566788999999999999999999877654        


Q ss_pred             ------CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEee
Q psy5279         253 ------DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF  326 (1310)
Q Consensus       253 ------~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDF  326 (1310)
                            ..+|+||||+.+ +|.+.+. .+.+++..++.++.||++||.|||++||+||||||+|||++.++ ..+||+||
T Consensus        83 ~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~-~~~kl~df  159 (342)
T cd07854          83 GSLTELNSVYIVQEYMET-DLANVLE-QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTED-LVLKIGDF  159 (342)
T ss_pred             ccccccceEEEEeecccc-cHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC-ceEEECCc
Confidence                  358999999974 7877664 34699999999999999999999999999999999999997543 46899999


Q ss_pred             ccceeec
Q psy5279         327 GLSRRIT  333 (1310)
Q Consensus       327 GLAr~i~  333 (1310)
                      |+++.+.
T Consensus       160 g~~~~~~  166 (342)
T cd07854         160 GLARIVD  166 (342)
T ss_pred             ccceecC
Confidence            9998753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0695|consensus

Probab=99.91  E-value=6e-25  Score=243.42  Aligned_cols=199  Identities=21%  Similarity=0.348  Sum_probs=166.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC---CcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~---~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~ly  256 (1310)
                      -.++|.++++||+|+|++|.++.+++|.+.||+|++++.   ...+.+.+..|-.+..+- +||.+|.|+.+|.++..++
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf  327 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF  327 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence            457899999999999999999999999999999999764   234456677777777665 7999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec-CC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT-SF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~-~~  335 (1310)
                      +|.||++||+|+-.+.++..++|..+++|..+|+.||.|||++|||.||||.+|+|++.++  +|||+|+|+.|.-- +.
T Consensus       328 fvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeg--hikltdygmcke~l~~g  405 (593)
T KOG0695|consen  328 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEG--HIKLTDYGMCKEGLGPG  405 (593)
T ss_pred             EEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCC--ceeecccchhhcCCCCC
Confidence            9999999999999998888899999999999999999999999999999999999999876  99999999998654 44


Q ss_pred             CCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchh--hhhhhcccCCCCCC
Q psy5279         336 GKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGN--AAVRRYYRRRPLNS  403 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~--~~l~~~~~r~~~~~  403 (1310)
                      ....++||||.|++     |+++-+                 +.|.+..|||+.  +...++-.|-|.|=
T Consensus       406 d~tstfcgtpnyia-----peilrg-----------------eeygfsvdwwalgvlmfemmagrspfdi  453 (593)
T KOG0695|consen  406 DTTSTFCGTPNYIA-----PEILRG-----------------EEYGFSVDWWALGVLMFEMMAGRSPFDI  453 (593)
T ss_pred             cccccccCCCcccc-----hhhhcc-----------------cccCceehHHHHHHHHHHHHcCCCCcce
Confidence            45678999999986     444322                 336677888654  44455666655543

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=6e-24  Score=238.28  Aligned_cols=149  Identities=29%  Similarity=0.458  Sum_probs=133.8

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ---YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~---~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+......   ....+.+|+++|+.++||||+++++.+...+..|+||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            4689999999999999999999999999999999764322   3456788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         260 ELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ||+.|++|.+.+...  ..+++..+..++.|++.||+|||++||+||||||+|||++.++  .+||+|||++....
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l~dfg~~~~~~  154 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESG--HIMLSDFDLSKQSD  154 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCC--CEEEeecchhhccc
Confidence            999999999988653  4699999999999999999999999999999999999998655  79999999987653

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.91  E-value=9.7e-24  Score=227.97  Aligned_cols=150  Identities=27%  Similarity=0.499  Sum_probs=137.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|++.+.||+|+||.||+|.+..+|+.||+|++..... .....+.+|+.++..++||||+++++++...+.+|+||||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            358899999999999999999999999999999876543 3456788999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +++++|.+.+.....+++..+..++.|++.||.|||+ +|++||||+|+||+++.++  .+||+|||+++.+..
T Consensus        81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~--~~~l~df~~~~~~~~  152 (264)
T cd06623          81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKG--EVKIADFGISKVLEN  152 (264)
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCC--CEEEccCccceeccc
Confidence            9999999999877789999999999999999999999 9999999999999998654  799999999987754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=6.7e-24  Score=227.46  Aligned_cols=150  Identities=30%  Similarity=0.524  Sum_probs=137.0

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|++.+.||+|+||.||+|.+..+++.||+|.+.....  .....+.+|+++++++.|||++++++++...+.+++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            47889999999999999999999999999999976543  3456788999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      +++++|.+.+.....+++..+..++.|++.||.|||++||+||||||+||+++.++  .+||+|||+++.....
T Consensus        81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~~l~d~~~~~~~~~~  152 (254)
T cd06627          81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDG--VVKLADFGVATKLNDV  152 (254)
T ss_pred             CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCC--CEEEeccccceecCCC
Confidence            99999999988777899999999999999999999999999999999999998644  7999999999977543

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.91  E-value=1.1e-24  Score=233.53  Aligned_cols=151  Identities=20%  Similarity=0.290  Sum_probs=118.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.|++.||.|||++||+||||||+||+++.  +..+||+|||++........ .......+++.|+|||.+....+
T Consensus       107 ~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  184 (262)
T cd00192         107 LLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGE--DLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIF  184 (262)
T ss_pred             HHHHHHHHHHHHHHHHcCCcccCccCcceEEECC--CCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCc
Confidence            4556789999999999999999999999999986  46799999999876543221 11222345688999999998889


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|+|||||++|+|++ |..||.+....+..+.+....  .......++++..+++.+|+. ++.+|+++.+.+.+
T Consensus       185 ~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         185 TSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGY--RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             chhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            999999999999999998 699999987777666655421  112234568999999999887 56789999887654

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.91  E-value=5.8e-24  Score=240.87  Aligned_cols=143  Identities=17%  Similarity=0.323  Sum_probs=126.7

Q ss_pred             eeceeccc--CceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecC
Q psy5279         187 FGDELGRG--VTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA  262 (1310)
Q Consensus       187 i~~~LG~G--sFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~  262 (1310)
                      +.++||+|  +||+||++.++.+|+.||+|.+....  ......+.+|+.+++.++|||||+++++|..++.+|+||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            56789999  78999999999999999999997542  233456778999999999999999999999999999999999


Q ss_pred             CCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         263 GGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       263 ~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                      ++|+|.+.+...  ..+++..+..++.|++.||+|||++||+||||||+|||++.++  .+|++|||.+..
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~--~~~l~~~~~~~~  150 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG--KVYLSGLRSNLS  150 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCC--cEEEcccchhhc
Confidence            999999888643  4589999999999999999999999999999999999998665  799999986544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.91  E-value=6.6e-25  Score=237.29  Aligned_cols=94  Identities=20%  Similarity=0.320  Sum_probs=77.8

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||+|||++||+||||||+||+++.  +..++++|||.+.......    ....+++.|+|||.+.+..++.+
T Consensus        89 ~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~df~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~  162 (237)
T cd05576          89 RWAAEMVVALDALHREGIVCRDLNPNNILLDD--RGHIQLTYFSRWSEVEDSC----DGEAVENMYCAPEVGGISEETEA  162 (237)
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC--CCCEEEecccchhcccccc----ccCCcCccccCCcccCCCCCCch
Confidence            34569999999999999999999999999986  4569999999875543211    11234567999999988889999


Q ss_pred             cchhHHHHHHHHHhcCCCCC
Q psy5279        1030 TDVWSAGVLAYVLLSGASPF 1049 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF 1049 (1310)
                      +|+||+||++|+|++|..||
T Consensus       163 ~DvwslG~il~el~~g~~~~  182 (237)
T cd05576         163 CDWWSLGAILFELLTGKTLV  182 (237)
T ss_pred             hhHHHHHHHHHHHHHCcchh
Confidence            99999999999999998776

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.91  E-value=1e-23  Score=266.14  Aligned_cols=148  Identities=21%  Similarity=0.275  Sum_probs=130.7

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|++....   ....+.+.+|+.+++.++|||||++++++.+.+..|+||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            57999999999999999999999999999999997532   223456889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhc-----------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecc
Q psy5279         260 ELAGGGELLHSLTRQ-----------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL  328 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~-----------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGL  328 (1310)
                      ||++||+|.+.+...           ..++...+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg--~vKLiDFGL  159 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFG--EVVILDWGA  159 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCC--CEEEEecCc
Confidence            999999998877531           1244566788999999999999999999999999999998655  799999999


Q ss_pred             ceee
Q psy5279         329 SRRI  332 (1310)
Q Consensus       329 Ar~i  332 (1310)
                      |+..
T Consensus       160 Ak~i  163 (932)
T PRK13184        160 AIFK  163 (932)
T ss_pred             ceec
Confidence            9876

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.91  E-value=6.3e-24  Score=241.42  Aligned_cols=150  Identities=24%  Similarity=0.416  Sum_probs=129.6

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-----e
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-----S  254 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-----~  254 (1310)
                      +.++|++.+.||+|+||.||+|.+..+|+.||+|++.... ......+.+|+.+|++++||||+++++++....     .
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   82 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND   82 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence            5678999999999999999999999999999999986432 233455778999999999999999999876543     5


Q ss_pred             EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         255 FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +|+|+||+.+ +|...+. ...+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        83 ~~lv~e~~~~-~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~--~~kl~dfg~~~~~~~  158 (336)
T cd07849          83 VYIVQELMET-DLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNC--DLKICDFGLARIADP  158 (336)
T ss_pred             EEEEehhccc-CHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC--CEEECcccceeeccc
Confidence            8999999975 7776664 35699999999999999999999999999999999999998655  799999999987643

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.91  E-value=6.2e-24  Score=237.03  Aligned_cols=236  Identities=25%  Similarity=0.389  Sum_probs=173.9

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ..++|++.+.||+|+||.||++.+..+++.||+|.+........+.+.+|+.+++.++||||+++++.|...+..|+|+|
T Consensus        17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e   96 (293)
T cd06647          17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME   96 (293)
T ss_pred             chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence            35789999999999999999999999999999999875544455678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC-CC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK-LN  339 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~-l~  339 (1310)
                      |+++|+|.+.+.+ ..+++.++..++.|++.||.|||++|++||||||+||+++.++  .+||+|||++........ ..
T Consensus        97 ~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~--~~kL~dfg~~~~~~~~~~~~~  173 (293)
T cd06647          97 YLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKRS  173 (293)
T ss_pred             cCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCC--CEEEccCcceecccccccccc
Confidence            9999999988764 3588999999999999999999999999999999999998654  799999999876543221 11


Q ss_pred             CcccchHHHh-------------------------hhcCCCccccCCCCCC-----CCCCCcchhhhhhhcccchhhchh
Q psy5279         340 PLEYDVRYVR-------------------------QALRHPWLNFADRKPT-----EDTPKLNTDALRNYYNLYKDWYGN  389 (1310)
Q Consensus       340 ~~~~t~~yv~-------------------------~~~r~P~l~~~~~~~~-----~~~p~~~~~~~~~~~~~~~D~~~~  389 (1310)
                      ...+++.|++                         ..+..||-........     ...+.+  .....+...+.|++..
T Consensus       174 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~  251 (293)
T cd06647         174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDFLNR  251 (293)
T ss_pred             cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCC--CCccccCHHHHHHHHH
Confidence            1122222221                         1233344221100000     000100  0111223445677777


Q ss_pred             hhhhhcccCCCCCCccCCCcceecCCCCCCCC
Q psy5279         390 AAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTP  421 (1310)
Q Consensus       390 ~~l~~~~~r~~~~~cl~hpw~~~~~~~~~~tp  421 (1310)
                      .+..+...|+++++++.|||....-|-.+.+|
T Consensus       252 ~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~~~  283 (293)
T cd06647         252 CLEMDVEKRGSAKELLQHPFLKIAKPLSSLTP  283 (293)
T ss_pred             HccCChhhCcCHHHHhcCHHHhcCcccccccc
Confidence            77778889999999999999754444444443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.91  E-value=1.2e-24  Score=236.72  Aligned_cols=148  Identities=21%  Similarity=0.284  Sum_probs=111.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++|++|+||||+||+++.  +..++|+|||++......... .....+++.|+|||.+.+..++.
T Consensus       109 ~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~  185 (267)
T cd08229         109 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTA-AHSLVGTPYYMSPERIHENGYNF  185 (267)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCCEEECcchhhhccccCCcc-cccccCCcCccCHHHhcCCCccc
Confidence            445779999999999999999999999999975  456999999988654322211 12234678999999999888999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChh--HHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEP--ETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~--e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      ++|+|||||++|+|++|..||.+....  .....+....+ .+......+.+.++++.+|+. ++.+|+++.+++
T Consensus       186 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~  259 (267)
T cd08229         186 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY-PPLPSDHYSEELRQLVNMCINPDPEKRPDITYVY  259 (267)
T ss_pred             hhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCC-CCCCcccccHHHHHHHHHhcCCCcccCCCHHHHH
Confidence            999999999999999999999765432  22222222111 111234578899999999886 667798887654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.91  E-value=1.1e-23  Score=235.68  Aligned_cols=151  Identities=28%  Similarity=0.422  Sum_probs=129.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~ly  256 (1310)
                      ..+.|++.+.||+|+||.||+|.++.+|+.||+|.+.....  .....+.+|+.+|++++||||+++++++...  +.+|
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF   84 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence            34679999999999999999999999999999999864322  2233456899999999999999999999765  5789


Q ss_pred             EEEecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         257 IISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +||||+.+ +|.+.+.. ...+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        85 lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~kL~dfg~~~~~~~  160 (309)
T cd07845          85 LVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG--CLKIADFGLARTYGL  160 (309)
T ss_pred             EEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--CEEECccceeeecCC
Confidence            99999975 67666654 35689999999999999999999999999999999999998655  799999999987653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.91  E-value=1.8e-24  Score=232.42  Aligned_cols=149  Identities=19%  Similarity=0.317  Sum_probs=116.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.|++.||.|||++|++||||||+||+++.  ...++|+|||++...............+++.|+|||.+.+..++.
T Consensus       106 ~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~  183 (258)
T smart00219      106 LSFALQIARGMEYLESKNFIHRDLAARNCLVGE--NLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTS  183 (258)
T ss_pred             HHHHHHHHHHHHHHhcCCeeecccccceEEEcc--CCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCc
Confidence            345679999999999999999999999999986  447999999998765432121111223567899999998888999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++|+||+||++|+|++ |.+||.+.+.....+.+.....  .......+.+..+++.+|+. ++.+|+++.+++.
T Consensus       184 ~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      184 KSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR--LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             chhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC--CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence            9999999999999998 8999998777776666544332  12233478899999999887 5678999888663

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG0192|consensus

Probab=99.91  E-value=2.2e-24  Score=250.85  Aligned_cols=204  Identities=18%  Similarity=0.244  Sum_probs=157.8

Q ss_pred             CceeecceeeeeeeCCEEEEEEeccCCC--cceeeecccCCcccccccc---cCCCchhHHHHHHHHHHHHHHHHHCC-c
Q psy5279         894 PFFREKPITIPVVIGDKLEMKCLAVGEP--KPVIQWFKLGTSTLCYLPI---VIPTTHKDAYCVTSVLDGLQYLHWRG-L  967 (1310)
Q Consensus       894 ~ffrE~~~~~~l~~g~~l~~~~l~~G~p--~~vi~~f~~g~~l~~~L~~---~i~~~~~~~~i~~QIl~AL~yLHs~g-I  967 (1310)
                      .|-+|+.++..+.|.+++.+......+|  ..++..|..++++..++..   .........-++.||+.||.|||+++ |
T Consensus        85 ~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~i  164 (362)
T KOG0192|consen   85 AFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPI  164 (362)
T ss_pred             HHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCe
Confidence            5677888888889999998888777766  6677778888888888854   23334445667889999999999999 9


Q ss_pred             eecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc--CCCCCCccchhHHHHHHHHHhcC
Q psy5279         968 CHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA--EEPIFPQTDVWSAGVLAYVLLSG 1045 (1310)
Q Consensus       968 VHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~--~~~ys~ksDIWSLGViLyeLLtG 1045 (1310)
                      |||||||+|||++... .++||||||+++...... ......+||+.|||||++.  ...|+.++|||||||++|||++|
T Consensus       165 IHrDLK~~NiLv~~~~-~~~KI~DFGlsr~~~~~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~  242 (362)
T KOG0192|consen  165 IHRDLKSDNILVDLKG-KTLKIADFGLSREKVISK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTG  242 (362)
T ss_pred             eecccChhhEEEcCCC-CEEEECCCccceeecccc-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHC
Confidence            9999999999998632 389999999997654322 2223357889999999999  56999999999999999999999


Q ss_pred             CCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1046 ASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1046 ~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      ..||.+.........+.....+ +.+...+++....++..++. ++..|++..+++
T Consensus       243 ~~Pf~~~~~~~~~~~v~~~~~R-p~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~  297 (362)
T KOG0192|consen  243 EIPFEDLAPVQVASAVVVGGLR-PPIPKECPPHLSSLMERCWLVDPSRRPSFLEIV  297 (362)
T ss_pred             CCCCCCCCHHHHHHHHHhcCCC-CCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence            9999998875554444333222 22234478888999988876 556678877654

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.91  E-value=1.2e-23  Score=234.38  Aligned_cols=149  Identities=25%  Similarity=0.441  Sum_probs=127.5

Q ss_pred             CeeeeceecccCceEEEEEEEcC--CCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERS--SGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSFT  256 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~--Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~ly  256 (1310)
                      +|++.+.||+|+||.||+|.++.  +++.||+|.+....   ......+.+|+.+++.++||||+++++++...  +.++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            47889999999999999999998  89999999997632   33345677899999999999999999999988  8899


Q ss_pred             EEEecCCCCchHHHhhh-----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC--CCeEEEEeeccc
Q psy5279         257 IISELAGGGELLHSLTR-----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLS  329 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~-----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~--~~~VKLsDFGLA  329 (1310)
                      +||||+++ +|.+.+..     ...+++..+..++.||+.||.|||++||+||||||+|||++.++  ...+||+|||++
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~  159 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA  159 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence            99999986 55554431     12589999999999999999999999999999999999998611  247999999999


Q ss_pred             eeec
Q psy5279         330 RRIT  333 (1310)
Q Consensus       330 r~i~  333 (1310)
                      +.+.
T Consensus       160 ~~~~  163 (316)
T cd07842         160 RLFN  163 (316)
T ss_pred             cccC
Confidence            8764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.91  E-value=1.4e-24  Score=238.54  Aligned_cols=149  Identities=26%  Similarity=0.433  Sum_probs=133.3

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|...+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.+++.++||||++++++|..++.+|+||||
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence            45778889999999999999999999999999987543 23445688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++|++|.+.+.. +.+++..+..++.|++.||.|||++||+|+||||+||+++.++  .+||+|||+++.+..
T Consensus        84 ~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~--~~~l~dfg~~~~~~~  153 (277)
T cd06642          84 LGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG--DVKLADFGVAGQLTD  153 (277)
T ss_pred             cCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC--CEEEccccccccccC
Confidence            999999888754 5689999999999999999999999999999999999998654  799999999987643

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.91  E-value=4.3e-24  Score=235.01  Aligned_cols=150  Identities=23%  Similarity=0.394  Sum_probs=130.4

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEe------CC
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYET------KD  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~------~~  253 (1310)
                      ....|++.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++++ +||||++++++|..      .+
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   92 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDD   92 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCC
Confidence            4468899999999999999999999999999999986543 2344578899999998 79999999999853      46


Q ss_pred             eEEEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         254 SFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                      .+|+||||+++|+|.+.+...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.
T Consensus        93 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~--~~~l~dfg~~~~  170 (282)
T cd06636          93 QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENA--EVKLVDFGVSAQ  170 (282)
T ss_pred             EEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEeeCcchhh
Confidence            789999999999999888643  3488888999999999999999999999999999999998655  799999999986


Q ss_pred             ec
Q psy5279         332 IT  333 (1310)
Q Consensus       332 i~  333 (1310)
                      ..
T Consensus       171 ~~  172 (282)
T cd06636         171 LD  172 (282)
T ss_pred             hh
Confidence            53

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.3e-23  Score=227.47  Aligned_cols=149  Identities=28%  Similarity=0.465  Sum_probs=132.0

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-----cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-----NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSF  255 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-----~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~l  255 (1310)
                      ..|.+.+.||+|+||.||+|.++.+|+.||+|.+....     ......+.+|+.+|++++||||+++++.+.+.  +.+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            46899999999999999999999999999999875321     12345688999999999999999999998764  568


Q ss_pred             EEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         256 TIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ++||||++|++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+||+++.++  .+||+|||+++...
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~--~~~l~dfg~~~~~~  157 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAG--NVKLGDFGASKRIQ  157 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--CEEECccccccccc
Confidence            99999999999999988777799999999999999999999999999999999999997654  79999999998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.91  E-value=6.9e-25  Score=241.05  Aligned_cols=149  Identities=17%  Similarity=0.244  Sum_probs=115.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.|++.||.|||++|++||||||+|||++.  +..+||+|||++......... ......+++.|+|||++.+..++
T Consensus       122 ~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  199 (277)
T cd05062         122 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT  199 (277)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCcchheEEEcC--CCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcC
Confidence            446789999999999999999999999999985  557999999998654321111 11122345789999999988899


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      .++|+|||||++|+|++ |..||.+.+..+....+.....  +.....++...++++.+|+. ++.+|+++.+.+.
T Consensus       200 ~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  273 (277)
T cd05062         200 TYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL--LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS  273 (277)
T ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999998 7999998877766655443322  22234577889999999886 5678999888764

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.91  E-value=5.1e-24  Score=234.54  Aligned_cols=149  Identities=23%  Similarity=0.456  Sum_probs=133.9

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      ..|+..+.||.|+||.||+|.+..+++.||+|++.... ......+.+|+.+++.+.||||+++++++...+.+|+||||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            45778899999999999999999999999999987543 23445688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++||+|.+.+.. +.+++..+..++.|++.||+|||+++++|+||+|+||+++.++  .++|+|||+++.+..
T Consensus        84 ~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~--~~~l~dfg~~~~~~~  153 (277)
T cd06640          84 LGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG--DVKLADFGVAGQLTD  153 (277)
T ss_pred             CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCC--CEEEcccccceeccC
Confidence            999999988764 5689999999999999999999999999999999999998655  799999999987654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.91  E-value=5.8e-24  Score=234.92  Aligned_cols=148  Identities=21%  Similarity=0.323  Sum_probs=134.4

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|++.+.||+|+||+||++.+..+|+.||+|++.... ......+.+|+++++.++||||+++++.+...+.+|+||||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            56889999999999999999999999999999886542 34456788999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      +++|+|...+...+.+++..+..++.|++.||.|||+ ++|+||||||+|||++.++  .++|+|||+++..
T Consensus        85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~l~d~gl~~~~  154 (284)
T cd06620          85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG--QIKLCDFGVSGEL  154 (284)
T ss_pred             CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC--cEEEccCCcccch
Confidence            9999999888777779999999999999999999996 6999999999999998654  7999999998765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0576|consensus

Probab=99.91  E-value=1.2e-25  Score=266.16  Aligned_cols=346  Identities=23%  Similarity=0.319  Sum_probs=242.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .-.++|++...+|.|+||.||+|+++.+++..|+|+++.....+-..+..|+-+|+..+|||||-+++.|-..+.+++.|
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            45688999999999999999999999999999999998765556667788999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l  338 (1310)
                      |||.||+|.+...--+.++|.++.+.+++.+.||+|||++|-+|||||-.|||+++.+  .||++|||.+..++.. .+-
T Consensus        92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~g--DvklaDfgvsaqitati~Kr  169 (829)
T KOG0576|consen   92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEG--DVKLADFGVSAQITATIAKR  169 (829)
T ss_pred             EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccC--ceeecccCchhhhhhhhhhh
Confidence            9999999999888788899999999999999999999999999999999999998766  7999999999877542 233


Q ss_pred             CCcccchHHHhhhcC------------------CCccccCCCCCCCCCCCcchhhhh-------------------hhcc
Q psy5279         339 NPLEYDVRYVRQALR------------------HPWLNFADRKPTEDTPKLNTDALR-------------------NYYN  381 (1310)
Q Consensus       339 ~~~~~t~~yv~~~~r------------------~P~l~~~~~~~~~~~p~~~~~~~~-------------------~~~~  381 (1310)
                      +.+.|||.++++...                  -+-+.++...|    |.++--+++                   .++.
T Consensus       170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqp----plfdlhpmr~l~LmTkS~~qpp~lkDk~kws~  245 (829)
T KOG0576|consen  170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQP----PLFDLHPMRALFLMTKSGFQPPTLKDKTKWSE  245 (829)
T ss_pred             hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCC----cccccchHHHHHHhhccCCCCCcccCCccchH
Confidence            456666654332110                  11111111111    112212222                   2233


Q ss_pred             cchhhchhhhhhhcccCCCCCCccCCCcceecCCCCCCCCCCCCcceecccccccccccccccCCCCCCCcccccC----
Q psy5279         382 LYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWEDN----  457 (1310)
Q Consensus       382 ~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~~~~tp~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~~~d~----  457 (1310)
                      ..-+|+-..+-+-+.+|+++...|+||+...-....... +      ++.+         -+.|+  +.+-.+.|-    
T Consensus       246 ~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~-e------LLdK---------~n~P~--~~v~~~~d~~~E~  307 (829)
T KOG0576|consen  246 FFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAI-E------LLDK---------VNNPN--PVVRYLEDYDGED  307 (829)
T ss_pred             HHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHH-H------HHHH---------ccCCC--CcccccccCCccc
Confidence            334454445556688999999999999964321000000 0      0000         12222  111111111    


Q ss_pred             ----CCCCCCCc--hhhHHHHhccCCCHHHHHHHHHHHHHHhhhhccCCceecCCCCCCeEeccCCCCcEEEecccccch
Q psy5279         458 ----VPNRGPGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  531 (1310)
Q Consensus       458 ----v~e~~~~~--el~~~~~~~~~~~e~~~~~~~~qi~~~~~y~H~~~i~hrDlkp~Nil~~~~~~~~ikl~DfG~a~~  531 (1310)
                          ..+.+.+|  -....-.....|-+.+.....+.=++++.|||+--=+|||    |||.+++   ..|..|||.+.+
T Consensus       308 ~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~~---~~~~~~~~v~~~  380 (829)
T KOG0576|consen  308 YLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSEE---EVKLLDFAVPPQ  380 (829)
T ss_pred             ccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----ccccccc---ccccccccCCcc
Confidence                22222333  1111222223456666777788888999999998889999    9999753   589999999999


Q ss_pred             hccccccCCCCCCCCceeEeechhhhhHHHHhhc
Q psy5279         532 ITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEA  565 (1310)
Q Consensus       532 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~  565 (1310)
                      ++-.-         --.++..||.+..++-++++
T Consensus       381 L~~~~---------~~~t~~~~~~~~~pev~~~~  405 (829)
T KOG0576|consen  381 LTRTM---------KPRTAIGTPEPLAPEVIQEN  405 (829)
T ss_pred             cCccc---------ccccCCCCCCCCCchhhccc
Confidence            88443         22456778888888866654

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.91  E-value=1.8e-24  Score=235.13  Aligned_cols=147  Identities=20%  Similarity=0.258  Sum_probs=114.7

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .++.|++.||+|||++||+||||||.|||++.  +..+||+|||++.........  ....+.+++.|+|||.+....++
T Consensus        99 ~i~~qi~~al~~lH~~~i~H~dlkp~nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  176 (257)
T cd05116          99 ELVHQVSMGMKYLEETNFVHRDLAARNVLLVT--QHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFS  176 (257)
T ss_pred             HHHHHHHHHHHHHHHCCEeecccchhhEEEcC--CCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcC
Confidence            34679999999999999999999999999985  457999999998765332211  11222345789999999888899


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      .++|+|||||++|+|++ |..||.+.+..+....+.....  +.....+++++++++.+|+. ++.+|+++..+.
T Consensus       177 ~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~  249 (257)
T cd05116         177 SKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER--MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVE  249 (257)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHH
Confidence            99999999999999997 9999998877766666554321  22334678999999999886 567888887654

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.91  E-value=9.7e-25  Score=240.59  Aligned_cols=150  Identities=17%  Similarity=0.276  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.|++.||.|||++||+||||||+|||++.  +..+||+|||+++....... .......++..|+|||.+.+..+
T Consensus       126 ~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  203 (283)
T cd05090         126 FLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE--QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKF  203 (283)
T ss_pred             HHHHHHHHHHHHHHHHhcCeehhccccceEEEcC--CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCC
Confidence            3456779999999999999999999999999985  45699999999876532211 11122234567999999998889


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|+|||||++|+|++ |..||.+.+..+..+.+.....  ......++++.++++.+|+. ++.+|+++.++++
T Consensus       204 ~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  278 (283)
T cd05090         204 SSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQL--LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHT  278 (283)
T ss_pred             CchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence            999999999999999998 9999998776665555543221  12234578899999999887 5677888887654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.91  E-value=1.7e-24  Score=241.77  Aligned_cols=150  Identities=22%  Similarity=0.320  Sum_probs=117.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++........ ....+.+++.|+|||++.+..++
T Consensus       140 ~~~~~qi~~al~~LH~~givH~dlkp~Nili~~--~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  217 (304)
T cd05101         140 VSCTYQVARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYT  217 (304)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecccccceEEEcC--CCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCC
Confidence            456789999999999999999999999999975  457999999998765432211 12223445789999999988899


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      .++|||||||++|+|++ |..||.+.+..+....+.... .. .....++.++++|+.+++. .+.+|+++.++++.
T Consensus       218 ~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         218 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RM-DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             chhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-cC-CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            99999999999999998 899999888777766654332 11 1224578899999999886 56779888876643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.91  E-value=1.7e-24  Score=235.38  Aligned_cols=150  Identities=17%  Similarity=0.260  Sum_probs=116.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.|++.||.|||++||+||||||+|||++.  +..+||+|||+++........ ......+++.|+|||.+.+..+
T Consensus       115 ~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~  192 (273)
T cd05035         115 LLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRE--DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVY  192 (273)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeccccchheEEECC--CCeEEECCccceeeccccccccccccccCCccccCHhhcccCCC
Confidence            3456789999999999999999999999999975  457999999998765432211 1112233567999999988889


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|||||||++|+|++ |.+||.+....+....+....  ........+++..+++.+++. +|.+|+++.+.+.
T Consensus       193 ~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~  267 (273)
T cd05035         193 TSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN--RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLRE  267 (273)
T ss_pred             CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999 999999887776665554332  112234678899999999887 5678988887654

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.91  E-value=5e-24  Score=242.64  Aligned_cols=151  Identities=25%  Similarity=0.394  Sum_probs=131.7

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC-----C
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK-----D  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-----~  253 (1310)
                      +..+|.+.+.||+|+||.||+|.+..+|+.||||.+....  ......+.+|+.+|+.++||||+++++++...     .
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN   82 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence            4568999999999999999999999999999999986532  22334567899999999999999999988654     3


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .+|+||||+. ++|.+.+...+.+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        83 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~--~~kL~Dfg~~~~~~  159 (337)
T cd07858          83 DVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC--DLKICDFGLARTTS  159 (337)
T ss_pred             cEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--CEEECcCccccccC
Confidence            5899999996 57888887777899999999999999999999999999999999999998654  79999999998764


Q ss_pred             C
Q psy5279         334 S  334 (1310)
Q Consensus       334 ~  334 (1310)
                      .
T Consensus       160 ~  160 (337)
T cd07858         160 E  160 (337)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.91  E-value=1.5e-24  Score=239.72  Aligned_cols=151  Identities=15%  Similarity=0.266  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.|++.||.|||++||+||||||+|||++.  ...+||+|||++........ .......+++.|+|||.+.+..+
T Consensus       132 ~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  209 (296)
T cd05051         132 LLYMATQIASGMRYLESLNFVHRDLATRNCLVGK--NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKF  209 (296)
T ss_pred             HHHHHHHHHHHHHHHHHcCccccccchhceeecC--CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCC
Confidence            3556789999999999999999999999999986  46799999999875432211 11112234578999999998889


Q ss_pred             CCccchhHHHHHHHHHhc--CCCCCCCCChhHHHhhhccc----ccc-ccccchhccHHHHHHHHHhcc-CCcchhcHHh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS--GASPFRGQSEPETRQNVNFV----RYR-FEYLFKELTQEATRFLMLIFK-HEVDWITLAN 1098 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt--G~~PF~g~~~~e~~~~I~~~----~~~-f~~~~~~lS~eakdLL~~il~-~~~~rit~~e 1098 (1310)
                      +.++|||||||++|+|++  |..||...+..+...++...    ... ........+.+..+++.+++. ++.+|+++.+
T Consensus       210 ~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~e  289 (296)
T cd05051         210 TTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFRE  289 (296)
T ss_pred             CccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHH
Confidence            999999999999999997  78999887766655544321    000 011123467899999999886 6678999887


Q ss_pred             hh
Q psy5279        1099 NI 1100 (1310)
Q Consensus      1099 ~L 1100 (1310)
                      ++
T Consensus       290 l~  291 (296)
T cd05051         290 IH  291 (296)
T ss_pred             HH
Confidence            65

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.91  E-value=9.2e-25  Score=240.44  Aligned_cols=152  Identities=21%  Similarity=0.310  Sum_probs=115.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEEEeeccceeeccCCccc-ccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLI-HPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL~DFGlAk~~~~~g~~~-~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||+|||++|++||||||+|||++..+ ...+||+|||+++......... ......++.|+|||++.+..+
T Consensus       119 ~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  198 (277)
T cd05036         119 LFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIF  198 (277)
T ss_pred             HHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCc
Confidence            44678999999999999999999999999998643 3468999999987653211111 111122357999999998899


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|||||||++|+|++ |..||.+.+..+....+.... + ......++.+..+++.+++. ++.+|+++.+.++|
T Consensus       199 ~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         199 TSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG-R-LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-c-CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            999999999999999997 999999887766655443221 1 11234567889999999886 56789999988765

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.91  E-value=1e-24  Score=237.68  Aligned_cols=148  Identities=20%  Similarity=0.268  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+|+||||+|||++.  +..+||+|||+++..............++..|+|||.+.+..++.+
T Consensus       104 ~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~--~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~  181 (256)
T cd05113         104 EMCKDVCEGMAYLESKQFIHRDLAARNCLVDD--QGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSK  181 (256)
T ss_pred             HHHHHHHHHHHHHHhCCeeccccCcceEEEcC--CCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccch
Confidence            35679999999999999999999999999975  4579999999987553322111111223457999999998889999


Q ss_pred             cchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1030 TDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1030 sDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +|+|||||++|+|++ |..||...+..+....+......  ......+...++++.+++. ++.+|+++.+++.
T Consensus       182 ~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~  253 (256)
T cd05113         182 SDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL--YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLS  253 (256)
T ss_pred             hHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            999999999999998 99999887776665555433221  1223457889999999886 5678999988764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.5e-24  Score=235.55  Aligned_cols=150  Identities=21%  Similarity=0.368  Sum_probs=120.7

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||+.||+|+||+|+||+++.  ...+||+|||++.....     .....+++.|+|||.+.+..++.+
T Consensus       101 ~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~  173 (260)
T cd05611         101 QYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQ--TGHLKLTDFGLSRNGLE-----NKKFVGTPDYLAPETILGVGDDKM  173 (260)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCcEEEeecccceeccc-----cccCCCCcCccChhhhcCCCCcch
Confidence            34679999999999999999999999999986  45699999998865432     122346688999999998888999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccc-cchhccHHHHHHHHHhcc-CCcchh---cHHhhhCCCc
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKELTQEATRFLMLIFK-HEVDWI---TLANNIDHEF 1104 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~-~~~~lS~eakdLL~~il~-~~~~ri---t~~e~L~H~f 1104 (1310)
                      +|+|||||++|+|++|..||.+.+.......+......++. ....+++++.+++.+|+. ++.+|+   ++.+++.|+|
T Consensus       174 ~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~  253 (260)
T cd05611         174 SDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPF  253 (260)
T ss_pred             hhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChH
Confidence            99999999999999999999988777766665544433332 233578999999999996 566788   5579999998


Q ss_pred             cc
Q psy5279        1105 WH 1106 (1310)
Q Consensus      1105 ~~ 1106 (1310)
                      |.
T Consensus       254 ~~  255 (260)
T cd05611         254 FK  255 (260)
T ss_pred             hh
Confidence            75

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.91  E-value=2.1e-24  Score=232.41  Aligned_cols=150  Identities=24%  Similarity=0.372  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC-CCCc
Q psy5279         951 CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP-IFPQ 1029 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~-ys~k 1029 (1310)
                      ++.||+.||.|||+.||+|+||||+||+++.  +..+||+|||++.......  ......+++.|+|||.+.... ++.+
T Consensus       107 ~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~--~~~~kl~d~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~  182 (258)
T cd06632         107 YTRQILLGLEYLHDRNTVHRDIKGANILVDT--NGVVKLADFGMAKQVVEFS--FAKSFKGSPYWMAPEVIAQQGGYGLA  182 (258)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEccCccceeccccc--cccccCCCcceeCHHHhcCCCCCCch
Confidence            4569999999999999999999999999975  4579999999887653322  112234678899999988776 8899


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcc
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFW 1105 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~ 1105 (1310)
                      +|+|||||++|+|++|..||...........+... ...+.....+++++++|+.+++. ++.+|+++.+.+.|+|+
T Consensus       183 ~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         183 ADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRS-KELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             hhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhc-ccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence            99999999999999999999876544433333221 12233345678899999999886 67789999999999985

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.91  E-value=2.7e-23  Score=221.77  Aligned_cols=151  Identities=31%  Similarity=0.517  Sum_probs=136.4

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeEEEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSFTIIS  259 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~lyLVm  259 (1310)
                      +|.+.+.||+|+||.||+|.+..+++.|++|++.....  ...+.+.+|+.++++++||||+++++.+...  +.+++|+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            47788999999999999999999999999999875542  3456788999999999999999999999998  8999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      ||+++++|.+.+.....+++.++..++.|++.||.|||+.|++|+||+|+||+++.++  .+||+|||++.......
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~--~~~l~d~~~~~~~~~~~  155 (260)
T cd06606          81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG--VVKLADFGCAKRLGDIE  155 (260)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEEcccccEEeccccc
Confidence            9999999999988777899999999999999999999999999999999999998644  79999999998876543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.91  E-value=5.7e-24  Score=228.95  Aligned_cols=150  Identities=25%  Similarity=0.402  Sum_probs=131.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEe--CCeEEEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYET--KDSFTIIS  259 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~--~~~lyLVm  259 (1310)
                      +|++.+.||.|+||.||+|.+..+|+.||+|++....  ....+.+.+|+.+|+.++||||+++++.+..  ...+|++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            4888999999999999999999999999999986543  2344567889999999999999999998764  45689999


Q ss_pred             ecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhh-----hCCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         260 ELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMH-----RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLH-----s~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      ||+++++|.+.+..    ...+++..+..++.||+.||.|||     +.+|+|+||||+|||++.++  .+||+|||+++
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~--~~kl~d~g~~~  158 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANN--NVKLGDFGLAK  158 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCC--CEEEecccccc
Confidence            99999999888864    356899999999999999999999     99999999999999998654  89999999999


Q ss_pred             eecCC
Q psy5279         331 RITSF  335 (1310)
Q Consensus       331 ~i~~~  335 (1310)
                      .....
T Consensus       159 ~~~~~  163 (265)
T cd08217         159 ILGHD  163 (265)
T ss_pred             cccCC
Confidence            76543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.91  E-value=1.2e-24  Score=242.79  Aligned_cols=154  Identities=21%  Similarity=0.351  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.|++.||.|||++|++||||||+||+++.  +..+||+|||++........ ......+++.|+|||.+.+..++.+
T Consensus       119 ~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~--~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~  195 (293)
T cd06647         119 AVCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPK  195 (293)
T ss_pred             HHHHHHHHHHHHHHhCCEeeccCCHHHEEEcC--CCCEEEccCcceeccccccc-ccccccCChhhcCchhhccCCCCch
Confidence            35679999999999999999999999999975  45699999998765433222 1122346788999999988888999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccc-cccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcccc
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFV-RYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~-~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      +|+|||||++|+|++|..||...+.......+... ...++ ....++...++++..++. ++.+|++..+++.|+|+..
T Consensus       196 ~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~  274 (293)
T cd06647         196 VDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQ-NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKI  274 (293)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCC-CccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence            99999999999999999999876554332222111 11111 233567889999999886 6778999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.91  E-value=6.2e-24  Score=230.43  Aligned_cols=149  Identities=27%  Similarity=0.446  Sum_probs=134.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +.|++.+.||+|+||.||+|.++.+++.+|+|.+..... .....+.+|+++++.++||||+++++.+...+.+++|+||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            357888999999999999999999999999999876532 3445688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +.+++|.+.+... ..+++..+..++.|++.||.|||+ .||+||||||+||+++.++  .+||+|||++..+.
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~--~~~l~d~g~~~~~~  152 (265)
T cd06605          81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG--QIKLCDFGVSGQLV  152 (265)
T ss_pred             cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC--CEEEeecccchhhH
Confidence            9999999988765 679999999999999999999999 9999999999999998754  79999999997654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.91  E-value=1.7e-24  Score=235.33  Aligned_cols=150  Identities=23%  Similarity=0.457  Sum_probs=119.0

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++|++|+||||+||+++.  +..+||+|||++.......  ......+++.|+|||.+.+..++.+
T Consensus        97 ~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~--~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~  172 (262)
T cd05572          97 FYIACVVLAFEYLHNRGIIYRDLKPENLLLDS--NGYVKLVDFGFAKKLKSGQ--KTWTFCGTPEYVAPEIILNKGYDFS  172 (262)
T ss_pred             HHHHHHHHHHHHHhhCCcccCCCCHHHEEEcC--CCCEEEeeCCcccccCccc--ccccccCCcCccChhHhcCCCCCCh
Confidence            34569999999999999999999999999976  4569999999987654321  1222346789999999988889999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCC--hhHHHhhhcc--ccccccccchhccHHHHHHHHHhcc-CCcchhc-----HHhh
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQS--EPETRQNVNF--VRYRFEYLFKELTQEATRFLMLIFK-HEVDWIT-----LANN 1099 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~--~~e~~~~I~~--~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit-----~~e~ 1099 (1310)
                      +|+||+||++|+|++|..||....  ..+....+..  ....++   ...+++.++++.+|+. ++.+|++     +.+.
T Consensus       173 ~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l  249 (262)
T cd05572         173 VDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFP---NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDI  249 (262)
T ss_pred             hhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCC---cccCHHHHHHHHHHccCChhhCcCCcccCHHHH
Confidence            999999999999999999998876  4444444442  222222   2348899999999886 5677988     8999


Q ss_pred             hCCCccc
Q psy5279        1100 IDHEFWH 1106 (1310)
Q Consensus      1100 L~H~f~~ 1106 (1310)
                      ++|+|+.
T Consensus       250 ~~~~~~~  256 (262)
T cd05572         250 KKHKWFN  256 (262)
T ss_pred             hcChhhh
Confidence            9999976

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.90  E-value=8.6e-24  Score=226.23  Aligned_cols=150  Identities=29%  Similarity=0.518  Sum_probs=135.2

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|.+.+.||+|+||.||++.+..+++.||+|++.....  .....+.+|+++++.++|||++++.+.+...+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            48889999999999999999999999999999975433  4456688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc----CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         262 AGGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       262 ~~GGeL~~~l~~~----~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ++|++|.+.+...    ..+++..+..++.|++.||.|||++|++|+||+|+|||++.++  .+||+|||++......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~--~~~l~d~~~~~~~~~~  156 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG--LVKLGDFGISKVLSST  156 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCC--cEEECCccceeecccC
Confidence            9999999988753    5699999999999999999999999999999999999998654  7999999999876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG1989|consensus

Probab=99.90  E-value=5.3e-24  Score=260.79  Aligned_cols=204  Identities=24%  Similarity=0.326  Sum_probs=154.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC-CCCcceEEEE-EEe------CCe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLVRLHDS-YET------KDS  254 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~-HPNIVkL~d~-f~~------~~~  254 (1310)
                      -++++.+.|-+|+|+.||.|.+...|..||+|++-.......+.+.+||++|++|. |||||.++|. ...      .-.
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            45678999999999999999999999999999987666677788999999999997 9999999993 321      135


Q ss_pred             EEEEEecCCCCchHHHhhh--cCCCCHHHHHHHHHHHHHHHHHhhhCC--eeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         255 FTIISELAGGGELLHSLTR--QSYYTEYDIAHYIRQLLSGLDYMHRLS--IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~--~~~lsE~~i~~ii~QIl~GL~YLHs~g--IVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      ++|.||||.||.|.+++..  ...|+|.++..|++|+|+||.+||.+.  |||||||-|||||..++  +.||||||-|.
T Consensus       117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g--~~KLCDFGSat  194 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADG--NYKLCDFGSAT  194 (738)
T ss_pred             EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCC--CEEeCcccccc
Confidence            7899999999999998863  345999999999999999999999987  99999999999998776  89999999886


Q ss_pred             eecCCC-CCCCcc---c-chHHHhhhcCCCccc-cCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCC
Q psy5279         331 RITSFG-KLNPLE---Y-DVRYVRQALRHPWLN-FADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       331 ~i~~~~-~l~~~~---~-t~~yv~~~~r~P~l~-~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~  402 (1310)
                      -....- ......   . -..|.|+.||+|++- +-...+               -+.=.| | .|+.+-+...-..|.+
T Consensus       195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~p---------------I~eKsDIWALGclLYkLCy~t~PFe  259 (738)
T KOG1989|consen  195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLP---------------IGEKSDIWALGCLLYKLCYFTTPFE  259 (738)
T ss_pred             cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCC---------------CcchhHHHHHHHHHHHHHHhCCCcC
Confidence            432111 000000   0 013567789999963 111111               011145 7 7787777655555544


Q ss_pred             C
Q psy5279         403 S  403 (1310)
Q Consensus       403 ~  403 (1310)
                      +
T Consensus       260 ~  260 (738)
T KOG1989|consen  260 E  260 (738)
T ss_pred             c
Confidence            4

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.90  E-value=1.2e-24  Score=240.66  Aligned_cols=153  Identities=22%  Similarity=0.338  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.|++.||.|||++||+||||||+|||++.  +..+||+|||++.......   .....|++.|+|||++.+. .++
T Consensus       100 ~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~--~~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~  174 (278)
T cd05606         100 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDE--HGHVRISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGVAYD  174 (278)
T ss_pred             HHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECC--CCCEEEccCcCccccCccC---CcCcCCCcCCcCcHHhcCCCCCC
Confidence            345679999999999999999999999999975  4569999999986543211   1223577899999999754 688


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCC---hhHHHhhhccccccccccchhccHHHHHHHHHhccC-Ccchh-----cHHh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQS---EPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKH-EVDWI-----TLAN 1098 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~---~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~-~~~ri-----t~~e 1098 (1310)
                      .++|+||+||++|+|++|..||.+..   .......+......   .....++++++++.+|+.. +..|+     ++.+
T Consensus       175 ~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~  251 (278)
T cd05606         175 SSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE---LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE  251 (278)
T ss_pred             cccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCC---CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHH
Confidence            99999999999999999999998763   22222222222222   2234689999999998864 67788     8999


Q ss_pred             hhCCCcccccc
Q psy5279        1099 NIDHEFWHVKD 1109 (1310)
Q Consensus      1099 ~L~H~f~~~~~ 1109 (1310)
                      .+.|+||...+
T Consensus       252 ll~~~~~~~~~  262 (278)
T cd05606         252 VKEHPFFRSLD  262 (278)
T ss_pred             HHhCccccCCC
Confidence            99999987543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.90  E-value=2e-24  Score=239.49  Aligned_cols=149  Identities=16%  Similarity=0.251  Sum_probs=116.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||+|||++|++||||||+|||++.  +..+||+|||+++........ ......+++.|+|||.+.+..+
T Consensus       122 ~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  199 (288)
T cd05093         122 MLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE--NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKF  199 (288)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc--CCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCC
Confidence            4556789999999999999999999999999975  457999999998754322111 1112234578999999998889


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +.++|+|||||++|+|++ |.+||.+.+..+....+.....  .......+++..+++.+|+. +|.+|+++.++.
T Consensus       200 ~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~  273 (288)
T cd05093         200 TTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV--LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIH  273 (288)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            999999999999999998 9999988877666665544332  12224567899999999997 567898887753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.90  E-value=3.8e-24  Score=239.42  Aligned_cols=147  Identities=25%  Similarity=0.387  Sum_probs=133.8

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +.|++.+.||+|+||.||+|.++.+++.||+|.+.....   .....+.+|+.+++.++||||+++++.+..++.+|+||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            368899999999999999999999999999999875432   23446778999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                      ||++||+|.+.+...+.+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++.
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~--~~~l~dfg~~~~  150 (305)
T cd05609          81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMG--HIKLTDFGLSKI  150 (305)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCC--CEEEeeCCCccc
Confidence            9999999999998777899999999999999999999999999999999999998654  799999999985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.90  E-value=5.6e-24  Score=235.68  Aligned_cols=149  Identities=26%  Similarity=0.401  Sum_probs=130.4

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSFTII  258 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~lyLV  258 (1310)
                      +.|++.+.||+|+||.||+|.++.+++.+|+|.++....  .....+.+|+.+|++++||||+++++++...  +.+|+|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            468899999999999999999999999999999875432  2233567899999999999999999999887  899999


Q ss_pred             EecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         259 SELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||+.+ +|.+.+.... .+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        85 ~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~--~~~l~d~g~~~~~~~  158 (293)
T cd07843          85 MEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRG--ILKICDFGLAREYGS  158 (293)
T ss_pred             ehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC--cEEEeecCceeeccC
Confidence            999985 8877776543 489999999999999999999999999999999999998654  799999999987654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.90  E-value=1.8e-23  Score=226.13  Aligned_cols=149  Identities=21%  Similarity=0.432  Sum_probs=133.3

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      +|++.+.||+|+||.||++.+..+|+.||+|.+....  ......+.+|+.++++++||||+++++++...+..|+||||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            5889999999999999999999999999999986532  23345688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +.+++|.+.+....  .+++..+..++.|++.||.|||++|++|+||+|+|||++.++  .+||+|||++.....
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~--~~~l~d~~~~~~~~~  153 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG--TIKLGDFGIARVLNS  153 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--CEEEeeccceeecCc
Confidence            99999999886532  478999999999999999999999999999999999997654  799999999987644

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.90  E-value=7e-24  Score=233.43  Aligned_cols=141  Identities=27%  Similarity=0.465  Sum_probs=126.3

Q ss_pred             ecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCCCch
Q psy5279         191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGEL  267 (1310)
Q Consensus       191 LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~GGeL  267 (1310)
                      ||+|+||+||+|.+..+|+.||+|++.....   .....+.+|+.+|+.++||||++++++|...+.+|+||||++|++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            6999999999999999999999999865322   2234567899999999999999999999999999999999999999


Q ss_pred             HHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         268 LHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       268 ~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .+.+....  .+++.++..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~--~~~l~dfg~~~~~~  146 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHG--NVRISDLGLAVELK  146 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEccCcchhhhc
Confidence            99887655  699999999999999999999999999999999999998655  79999999997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0596|consensus

Probab=99.90  E-value=1.1e-23  Score=246.22  Aligned_cols=91  Identities=19%  Similarity=0.289  Sum_probs=68.9

Q ss_pred             CCccccccccc--CCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-ccc
Q psy5279         931 GTSTLCYLPIV--IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHP 1007 (1310)
Q Consensus       931 g~~l~~~L~~~--i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~ 1007 (1310)
                      ..+|..+|...  ........++-+|+|.|+.++|.+||||.||||.|+|+-.   +.+||+|||+|..+....+. ...
T Consensus       443 d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk---G~LKLIDFGIA~aI~~DTTsI~kd  519 (677)
T KOG0596|consen  443 DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK---GRLKLIDFGIANAIQPDTTSIVKD  519 (677)
T ss_pred             cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe---eeEEeeeechhcccCccccceeec
Confidence            34444555332  2333367888899999999999999999999999999874   56999999999887654332 233


Q ss_pred             CCCCCCcccccccccCC
Q psy5279        1008 INTPNPEFAAPEVLAEE 1024 (1310)
Q Consensus      1008 ~~tGtp~Y~APEvl~~~ 1024 (1310)
                      ..+||+.||+||.+...
T Consensus       520 sQvGT~NYMsPEAl~~~  536 (677)
T KOG0596|consen  520 SQVGTVNYMSPEALTDM  536 (677)
T ss_pred             cccCcccccCHHHHhhc
Confidence            45688999999998644

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.90  E-value=8.2e-24  Score=245.76  Aligned_cols=151  Identities=25%  Similarity=0.394  Sum_probs=130.5

Q ss_pred             CCCeeeeceecccCceEEEEEEE-----cCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVE-----RSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~-----k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~  254 (1310)
                      .++|++.+.||+|+||.||+|..     ..++..||+|+++... ....+.+.+|+.+|+.+ +|||||+++++|...+.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            35799999999999999999974     4567799999986432 23455688999999999 89999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhcC-----------------------------------------------------------
Q psy5279         255 FTIISELAGGGELLHSLTRQS-----------------------------------------------------------  275 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~-----------------------------------------------------------  275 (1310)
                      .|+|||||+||+|.+.+....                                                           
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            999999999999998885421                                                           


Q ss_pred             ----------------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         276 ----------------YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       276 ----------------~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                                      .+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~--~~kl~DfG~a~~~~~  266 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGR--ITKICDFGLARDIRN  266 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCC--cEEEecCccceeccC
Confidence                            367778889999999999999999999999999999998644  799999999987654

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.90  E-value=2.1e-24  Score=235.44  Aligned_cols=149  Identities=17%  Similarity=0.261  Sum_probs=115.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||+++........ ......+++.|+|||.+.+..++
T Consensus       115 ~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  192 (272)
T cd05075         115 VKFMTDIASGMEYLSSKSFIHRDLAARNCMLNE--NMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYT  192 (272)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccccchhheEEcC--CCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcC
Confidence            456789999999999999999999999999975  456999999998765332211 11223345789999999999999


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      .++|+|||||++|+|++ |..||.+....+....+..... + .....++...++++.+++. ++.+|+++.+++.
T Consensus       193 ~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~  266 (272)
T cd05075         193 TKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNR-L-KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC  266 (272)
T ss_pred             hHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC-C-CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            99999999999999999 8999998777666555544321 1 1223567889999999886 5668988887654

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.90  E-value=1.9e-23  Score=228.77  Aligned_cols=147  Identities=29%  Similarity=0.411  Sum_probs=126.7

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcC-CCCcceEEEEEEeC--CeEEEEEe
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLC-HRNLVRLHDSYETK--DSFTIISE  260 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~--~~lyLVmE  260 (1310)
                      |++.+.||+|+||.||+|.++.+++.||+|++..... .......+|+.+|.++. ||||+++++++.+.  +.+++|||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            6788999999999999999999999999999865422 22223457999999985 99999999999988  89999999


Q ss_pred             cCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         261 LAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       261 y~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |+.+ +|.+.+... ..+++.++..++.|++.||.|||++||+||||||+||+++.   ..+||+|||+++.+...
T Consensus        81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~---~~~kl~dfg~~~~~~~~  152 (282)
T cd07831          81 LMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD---DILKLADFGSCRGIYSK  152 (282)
T ss_pred             cCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC---CCeEEEecccccccccC
Confidence            9985 777777653 46899999999999999999999999999999999999986   47999999999876543

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	1310
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		6e-25
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		8e-21
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		5e-14
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		6e-24
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		5e-20
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		6e-11
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		5e-22
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		7e-20
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		6e-15
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		5e-22
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		9e-20
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		5e-14
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		5e-22
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		7e-20
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-14
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		6e-22
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-19
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		6e-14
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		6e-22
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-19
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		6e-14
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		6e-22
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		4e-13
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		7e-22
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		1e-19
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		8e-13
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-21
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-19
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-13
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		2e-21
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		2e-09
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		3e-21
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		2e-12
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		5e-21
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		2e-12
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		6e-21
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		1e-18
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		2e-11
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		7e-21
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		1e-18
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-11
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		8e-21
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-19
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-13
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		1e-20
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-19
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-13
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		1e-20
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-19
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-13
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		1e-20
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-19
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-13
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		1e-20
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		2e-19
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		2e-13
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		1e-20
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-19
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-13
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-20
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		2e-19
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-13
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		1e-20
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-19
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-13
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		1e-20
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		1e-18
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		1e-13
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-20
3kk9_A	282	Camkii Substrate Complex B Length = 282		7e-12
3kk9_A	282	Camkii Substrate Complex B Length = 282		6e-04
3kk8_A	284	Camkii Substrate Complex A Length = 284		1e-20
3kk8_A	284	Camkii Substrate Complex A Length = 284		7e-12
3kk8_A	284	Camkii Substrate Complex A Length = 284		6e-04
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		2e-20
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		6e-12
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		7e-04
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-20
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-19
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		1e-13
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		2e-20
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		5e-19
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		2e-13
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		2e-20
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		5e-19
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		2e-13
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-20
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		3e-12
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		6e-04
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		2e-20
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		2e-19
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-13
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-20
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		4e-13
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-09
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		2e-18
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		1e-10
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		4e-05
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		2e-18
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		1e-13
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-18
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		3e-10
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		6e-05
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		3e-18
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		2e-10
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		2e-05
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		3e-18
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-10
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		4e-05
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		6e-18
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		5e-13
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-09
3soa_A	444	Full-Length Human Camkii Length = 444		7e-18
3soa_A	444	Full-Length Human Camkii Length = 444		4e-11
3soa_A	444	Full-Length Human Camkii Length = 444		8e-05
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		1e-17
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		1e-10
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		8e-05
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		2e-17
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		5e-17
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		5e-09
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		3e-17
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		8e-13
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		1e-09
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		4e-17
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		6e-12
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		2e-06
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		6e-17
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		6e-12
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-06
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		7e-17
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		9e-13
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		1e-09
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		7e-17
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		9e-13
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		1e-09
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-16
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		4e-12
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-06
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-16
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-12
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		8e-10
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-16
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		4e-12
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-06
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-16
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-13
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		3e-07
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		3e-16
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		4e-08
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-04
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-16
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-13
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-07
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		3e-16
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		3e-13
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-07
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		3e-16
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		5e-08
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-04
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		6e-16
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		5e-11
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-06
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		1e-15
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		2e-04
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		5e-14
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-07
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-06
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		7e-04
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		7e-14
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		3e-10
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		9e-14
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		3e-12
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		3e-08
3g51_A	325	Structural Diversity Of The Active Conformation Of		1e-13
3g51_A	325	Structural Diversity Of The Active Conformation Of		8e-07
3g51_A	325	Structural Diversity Of The Active Conformation Of		9e-06
3g51_A	325	Structural Diversity Of The Active Conformation Of		5e-04
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-13
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		3e-12
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		3e-08
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-13
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		8e-05
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-13
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		1e-06
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		1e-05
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		5e-04
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-13
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		1e-06
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		9e-06
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		5e-04
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		2e-13
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		8e-05
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-13
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		1e-04
4fie_A	423	Full-Length Human Pak4 Length = 423		4e-13
4fie_A	423	Full-Length Human Pak4 Length = 423		6e-07
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		6e-13
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-06
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		7e-13
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-06
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		7e-13
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		4e-05
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		9e-13
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-06
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-12
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		3e-11
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		7e-06
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-12
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-06
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		1e-12
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		2e-07
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-12
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-06
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-12
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		2e-06
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		1e-12
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-06
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		2e-12
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-06
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-12
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-06
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		2e-12
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		6e-07
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-12
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		6e-06
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-12
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		9e-06
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		7e-12
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		7e-12
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		1e-06
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		8e-12
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		8e-12
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-11
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-07
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-11
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-07
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		2e-11
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		2e-07
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		2e-11
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		1e-08
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		3e-11
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		1e-06
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		3e-11
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		5e-06
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		3e-11
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		1e-06
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		4e-11
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		1e-06
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		4e-11
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		2e-06
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		4e-11
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		1e-06
2oza_A	356	Structure Of P38alpha Complex Length = 356		4e-11
2oza_A	356	Structure Of P38alpha Complex Length = 356		4e-06
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		4e-11
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		2e-06
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		4e-11
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		5e-06
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		4e-11
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		4e-11
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		4e-06
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		5e-11
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		1e-08
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-05
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		5e-11
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		1e-08
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		5e-11
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		5e-06
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		5e-11
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		5e-06
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		5e-11
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		5e-06
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		5e-11
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		4e-06
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		5e-11
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		6e-06
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		5e-11
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		6e-06
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		6e-11
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		5e-06
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		6e-11
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		7e-09
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-05
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		6e-11
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		4e-08
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		7e-11
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		4e-09
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		7e-11
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		2e-05
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		7e-11
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		9e-09
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-05
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		7e-11
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		2e-04
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		8e-11
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		2e-07
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		1e-04
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		8e-11
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		3e-04
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		8e-11
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		4e-05
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		9e-11
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		4e-05
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		9e-11
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		8e-09
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		1e-10
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		4e-04
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		1e-10
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		1e-08
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-10
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-08
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-10
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-08
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		1e-10
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		1e-08
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		1e-10
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		1e-08
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		2e-10
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		1e-09
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		5e-04
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-10
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		6e-08
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-05
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		2e-10
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		9e-07
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		2e-10
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		1e-08
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-10
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		7e-08
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-05
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		2e-10
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		2e-07
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		2e-10
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		3e-04
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-10
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-06
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		2e-10
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		2e-06
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		2e-10
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		2e-04
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-10
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-06
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		2e-10
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		2e-06
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		2e-10
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-06
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		3e-10
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		3e-09
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-08
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		3e-10
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		1e-06
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		3e-10
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		3e-04
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		3e-10
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		1e-08
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-05
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		3e-10
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		3e-10
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		8e-07
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-10
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-08
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-10
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		3e-10
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		1e-08
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		1e-05
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		3e-10
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		1e-08
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-05
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		3e-10
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		3e-05
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		3e-10
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		3e-05
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		3e-10
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		3e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		3e-10
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		1e-04
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		3e-10
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		3e-05
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		3e-10
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		3e-05
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-10
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		3e-05
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		4e-10
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		3e-09
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		5e-04
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		4e-10
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		3e-05
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		4e-10
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		1e-08
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-05
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		4e-10
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		1e-04
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		4e-10
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		3e-05
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		4e-10
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		1e-08
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		1e-05
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-10
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		3e-05
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		4e-10
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		3e-05
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		4e-10
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		1e-08
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		1e-05
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		4e-10
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		2e-08
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		5e-10
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		4e-08
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		2e-05
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		5e-10
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		3e-05
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		5e-10
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		9e-09
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-05
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		5e-10
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		9e-07
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		5e-10
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-05
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		5e-10
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		3e-05
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		5e-10
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		6e-06
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		5e-10
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		1e-08
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		1e-05
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		6e-10
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		6e-10
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		6e-10
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		3e-05
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		6e-10
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		9e-04
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		6e-10
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		9e-04
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		6e-10
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-07
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		4e-05
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		6e-10
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-05
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		6e-10
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-08
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		1e-05
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		6e-10
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		3e-05
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		6e-10
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		9e-07
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		7e-10
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		4e-05
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		7e-10
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		6e-06
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		7e-05
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		7e-10
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-05
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		9e-10
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		6e-08
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-05
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		9e-10
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		3e-05
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		9e-10
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-09
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		6e-08
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		1e-09
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		5e-08
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-05
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-09
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		5e-08
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-05
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		1e-09
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		4e-08
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		2e-05
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		1e-09
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		7e-06
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		1e-09
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		5e-08
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		1e-05
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-09
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		5e-08
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-05
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-09
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		5e-08
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-05
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		1e-09
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		1e-07
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		4e-05
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		1e-09
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-04
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		1e-09
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		4e-08
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		1e-05
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		1e-09
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		1e-09
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		5e-08
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		1e-09
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		4e-08
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		1e-05
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-09
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		6e-08
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-05
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-09
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-08
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-09
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		4e-08
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		1e-05
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		2e-09
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		2e-08
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		3e-04
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-09
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-04
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-09
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		1e-08
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		1e-05
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		2e-09
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		6e-08
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		1e-05
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		2e-09
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		6e-08
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		1e-05
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		2e-09
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		2e-04
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		2e-09
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		2e-04
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		2e-09
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		5e-08
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-05
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-09
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		4e-08
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-09
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		4e-08
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		2e-09
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		3e-08
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-09
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		2e-09
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		3e-04
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-09
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		3e-04
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-09
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		3e-08
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		2e-09
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-07
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-05
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-09
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-08
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		6e-06
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		2e-09
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		2e-09
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		3e-04
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		2e-09
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		3e-04
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		2e-09
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-09
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-08
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		6e-06
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		2e-09
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		3e-04
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-09
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		3e-04
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-09
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		3e-04
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-09
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		3e-04
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		2e-09
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		4e-04
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		2e-09
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		3e-04
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-09
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		3e-04
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-09
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		3e-04
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		2e-09
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		9e-09
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		3e-09
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		4e-04
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		3e-09
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		3e-06
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		3e-09
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		3e-08
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		3e-09
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		4e-05
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		3e-09
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		1e-08
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		3e-09
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		9e-09
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		3e-09
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		3e-08
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		3e-09
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		4e-08
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		3e-09
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		9e-09
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		3e-09
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		4e-08
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		3e-09
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		3e-09
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-08
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-09
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		4e-08
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		3e-09
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		4e-08
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		4e-09
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		4e-08
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		4e-09
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		4e-08
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		4e-09
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-06
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		4e-09
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		4e-04
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		4e-09
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		2e-05
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		4e-09
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		4e-08
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		4e-09
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		1e-07
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		4e-09
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-05
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		4e-09
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		4e-08
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		4e-09
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-07
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		4e-09
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		4e-08
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		4e-09
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		3e-08
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-09
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		1e-08
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		4e-09
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		3e-04
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		5e-09
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-08
4ae6_A	343	Structure And Function Of The Human Sperm-specific		5e-09
4ae6_A	343	Structure And Function Of The Human Sperm-specific		3e-05
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-09
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-05
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-09
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-05
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		5e-09
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		3e-08
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		5e-09
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		3e-05
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		7e-09
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		3e-05
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		7e-09
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		7e-09
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		3e-05
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		7e-09
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		2e-06
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		5e-05
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		7e-09
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		1e-06
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		5e-05
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		8e-09
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		3e-05
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		8e-09
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-08
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		8e-09
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		5e-05
4ae9_A	343	Structure And Function Of The Human Sperm-specific		8e-09
4ae9_A	343	Structure And Function Of The Human Sperm-specific		3e-05
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-08
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		4e-06
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-08
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-08
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-08
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		5e-06
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		1e-08
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		3e-05
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		1e-08
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-05
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		1e-08
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		3e-05
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		1e-08
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		2e-04
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		1e-08
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		5e-05
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-08
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-05
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		1e-08
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		3e-05
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		1e-08
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-05
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		1e-08
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		3e-05
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		1e-08
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		3e-05
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		1e-08
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		1e-04
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		1e-08
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		3e-05
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		2e-08
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-08
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		5e-05
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		2e-08
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		2e-08
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		3e-05
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		8e-05
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-08
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-05
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		2e-08
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		3e-05
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-08
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-05
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		2e-08
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		3e-08
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		3e-08
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		4e-05
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		3e-08
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		4e-05
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		3e-08
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		1e-07
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-08
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		6e-05
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		5e-08
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		4e-05
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		5e-08
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		4e-04
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		6e-08
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		5e-04
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		6e-08
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		6e-08
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		7e-08
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		7e-08
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		7e-08
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		9e-08
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		9e-08
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		5e-05
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		9e-08
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		9e-08
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		9e-08
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		1e-07
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-07
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		1e-07
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		2e-07
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		1e-06
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		2e-07
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		2e-07
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		2e-07
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		2e-07
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		2e-07
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		2e-07
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		2e-07
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		2e-07
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		3e-07
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		6e-04
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		3e-07
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		3e-07
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		6e-05
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		3e-07
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		3e-07
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		3e-05
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-07
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-05
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-07
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		5e-05
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		4e-07
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		4e-07
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		4e-07
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		4e-04
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		4e-07
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		4e-04
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		4e-07
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		2e-04
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		4e-07
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		4e-04
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		4e-07
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		4e-04
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		4e-07
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		3e-04
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		4e-07
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		4e-04
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		4e-07
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		5e-04
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		5e-07
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		4e-04
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-07
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-04
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		5e-07
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		4e-04
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		5e-07
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		5e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		5e-07
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		5e-07
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		5e-07
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		5e-07
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		4e-04
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		5e-07
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		4e-04
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-07
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		5e-07
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		5e-07
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		3e-06
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		5e-07
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		5e-07
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		4e-06
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		6e-07
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		6e-07
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		4e-04
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		6e-07
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		4e-06
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-07
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		6e-07
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		5e-04
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		6e-07
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		4e-04
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		6e-07
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		5e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		6e-07
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		6e-07
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		6e-07
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		7e-07
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		7e-07
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		7e-07
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		7e-07
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		7e-07
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		3e-06
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		7e-07
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		7e-07
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		7e-07
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		7e-07
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		4e-06
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		7e-07
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		7e-07
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		7e-07
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		7e-07
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		4e-04
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		7e-07
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		7e-07
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		7e-07
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		7e-07
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		7e-07
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		7e-07
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		7e-07
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		4e-05
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		8e-07
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-05
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		8e-07
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-06
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		8e-07
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		8e-07
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		8e-07
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		9e-07
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		9e-07
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		9e-07
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		9e-07
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		9e-07
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-06
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		1e-06
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		8e-05
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-06
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-04
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-06
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-04
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-06
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		8e-05
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		1e-06
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		1e-06
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		1e-06
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		2e-06
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		2e-06
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-06
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-06
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-04
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-06
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-06
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		2e-06
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-04
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-06
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-06
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		3e-06
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		3e-06
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		3e-06
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		2e-04
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		3e-06
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		3e-06
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		3e-06
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		3e-06
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		3e-06
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		4e-06
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		7e-06
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-06
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-06
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		4e-06
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		4e-06
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		2e-04
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		4e-06
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		4e-06
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		4e-06
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-04
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		5e-06
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		5e-06
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		4e-05
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		5e-06
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		5e-06
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		5e-06
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		6e-06
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		6e-06
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		6e-06
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		6e-06
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		6e-06
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		6e-06
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		6e-06
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		6e-06
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		7e-06
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-04
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		7e-06
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		5e-05
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		7e-06
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		2e-04
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		7e-06
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		7e-06
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		8e-06
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		2e-05
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		8e-06
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		8e-06
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		8e-06
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		8e-06
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		8e-06
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		3e-04
4exu_A	371	Mapk13, Inactive Form Length = 371		9e-06
4exu_A	371	Mapk13, Inactive Form Length = 371		2e-05
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		9e-06
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		9e-06
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-04
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		9e-06
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		2e-04
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		9e-06
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		1e-05
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		1e-05
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		2e-04
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		1e-05
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		1e-05
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		1e-05
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		1e-05
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		1e-05
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		1e-05
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		1e-05
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		2e-05
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		2e-05
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-05
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-05
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		2e-05
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		2e-05
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		6e-04
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		2e-05
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		2e-05
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		2e-05
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		2e-05
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-05
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		3e-05
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		3e-05
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		3e-05
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		3e-05
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		3e-05
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		3e-05
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		4e-05
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		4e-05
4h58_A	275	Braf In Complex With Compound 3 Length = 275		4e-05
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		4e-05
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		4e-05
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		4e-05
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		4e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		4e-05
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		4e-05
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		4e-05
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		4e-05
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		4e-05
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		4e-05
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		4e-05
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		4e-05
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		4e-05
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		4e-05
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		4e-05
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		5e-05
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		5e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		5e-05
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		5e-05
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		5e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		5e-05
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		5e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		5e-05
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		5e-05
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		5e-05
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		5e-05
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		5e-05
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		5e-05
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		5e-05
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		5e-05
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		5e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		5e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		5e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		5e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		5e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		5e-05
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		5e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		5e-05
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		5e-05
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		5e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		5e-05
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		5e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		5e-05
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		5e-05
2oza_B	366	Structure Of P38alpha Complex Length = 366		6e-05
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		6e-05
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		6e-05
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		6e-05
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		6e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		6e-05
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		6e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		6e-05
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		6e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		6e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		6e-05
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		6e-05
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		6e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		6e-05
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		6e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		6e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		6e-05
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		6e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		6e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		6e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		6e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		6e-05
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		7e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		7e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		7e-05
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		7e-05
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		7e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		7e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		7e-05
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		7e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		7e-05
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		7e-05
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		2e-04
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		7e-05
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		1e-04
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		7e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		8e-05
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		8e-05
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		8e-05
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		8e-05
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		8e-05
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		9e-05
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		9e-05
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		9e-05
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		9e-05
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		9e-05
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		9e-05
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		9e-05
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		9e-05
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		9e-05
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		9e-05
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		1e-04
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		1e-04
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-04
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-04
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		2e-04
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-04
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		1e-04
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-04
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		2e-04
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		1e-04
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		1e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-04
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		2e-04
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-04
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		2e-04
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-04
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-04
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		2e-04
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-04
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		2e-04
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-04
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		2e-04
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		2e-04
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		2e-04
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		2e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		2e-04
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		2e-04
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		3e-04
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		6e-04
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		3e-04
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		3e-04
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		3e-04
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		6e-04
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		3e-04
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		6e-04
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		3e-04
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		7e-04
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		3e-04
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		7e-04
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		3e-04
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		7e-04
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		3e-04
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		7e-04
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		3e-04
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-04
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		3e-04
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		7e-04
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-04
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		3e-04
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		7e-04
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		3e-04
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		3e-04
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		9e-04
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		4e-04
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		4e-04
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		4e-04
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		4e-04
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		5e-04
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		5e-04
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		5e-04
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		5e-04
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		5e-04
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-04
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-04
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		6e-04
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		6e-04
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		6e-04
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-04
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		6e-04
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		8e-04
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		7e-04
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		7e-04
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		7e-04
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		7e-04
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		7e-04
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		7e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		8e-04
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		8e-04
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-04
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		8e-04
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		8e-04
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		8e-04
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		8e-04
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		8e-04
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		8e-04
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		8e-04
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		9e-04
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		9e-04
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		9e-04
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		9e-04
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-04

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score =  113 bits (283), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 92/170 (54%), Gaps = 7/170 (4%)
Query: 174 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI 233
           V+ +   + D YD  +ELG G  G+V+  VE+++GR + AK +       K   KNE+ I
Sbjct: 42  VEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISI 101
Query: 234 MNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQLLSG 292
           MNQL H  L+ LHD++E K    +I E   GGEL   +  + Y  +E ++ +Y+RQ   G
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 161
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE 342
           L +MH  SI HL + P +++        + + DFGL+       KLNP E
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLAT------KLNPDE 205

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score =  100 bits (248), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 81/135 (60%), Gaps = 3/135 (2%)
Query: 957  DGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFA 1016
            +GL+++H   + HL+I+P+N++  + ++  VK+ID G   ++      I  + T   EFA
Sbjct: 160  EGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP--DEIVKVTTATAEFA 217
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1075
            APE++  EP+   TD+W+ GVL YVLLSG SPF G+ + ET QNV    + F E  F  +
Sbjct: 218  APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 277
Query: 1076 TQEATRFLMLIFKHE 1090
            + EA  F+  + + E
Sbjct: 278  SPEAKDFIKNLLQKE 292

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 77.4 bits (189), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
            APE++  EP+   TD+W+ GVL YVLLSG SPF G+ + ET QNV    + F E  F  +
Sbjct: 218  APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 277
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + EA  F+  + ++ P KR TV +  E+ WL
Sbjct: 278  SPEAKDFIKNLLQKEPRKRLTVHDALEHPWL 308

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score =  110 bits (274), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 87/142 (61%), Gaps = 1/142 (0%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
           LG G  G V+   E ++G   AAK++  +G + K   KNE+ +MNQL H NL++L+D++E
Sbjct: 97  LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 251 TKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
           +K+   ++ E   GGEL   +  +SY  TE D   +++Q+  G+ +MH++ I HL L P 
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPE 216
Query: 310 DLLVAHPGGRHLLLTDFGLSRR 331
           ++L  +   + + + DFGL+RR
Sbjct: 217 NILCVNRDAKQIKIIDFGLARR 238

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 97.1 bits (240), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 85/143 (59%), Gaps = 3/143 (2%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
            +  + +G++++H   + HL+++P+N++  +  + Q+K+ID G  +R      L   +N  
Sbjct: 193  MKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL--KVNFG 250
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-Y 1070
             PEF APEV+  + +   TD+WS GV+AY+LLSG SPF G ++ ET  N+   R+  E  
Sbjct: 251  TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDE 310
Query: 1071 LFKELTQEATRFLMLIFKHEVDW 1093
             F+++++EA  F+  +   E  W
Sbjct: 311  EFQDISEEAKEFISKLLIKEKSW 333

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 67.0 bits (162), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 1109 DLKRETNYTFRLSAKNV----IGWSEKGIPSALFKTKEQAPEVLAEEPI------FPQTD 1158
            DLK E        AK +     G + +  P    K     PE LA E +      FP TD
Sbjct: 212  DLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFP-TD 270
Query: 1159 VWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLIFKRA 1217
            +WS GV+AY+LLSG SPF G ++ ET  N+   R+  E   F+++++EA  F+  +  + 
Sbjct: 271  MWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKE 330
Query: 1218 PGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
               R +  E  ++ WL  S++ +  R  A    NR  +  D
Sbjct: 331  KSWRISASEALKHPWL--SDHKLHSRLSAQKKKNRGSDAQD 369

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score =  103 bits (258), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ------YKSLFKNE 230
           + + + D YD G+ELG G   IV    E+S+G  YAAK +  + ++       +   + E
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIERE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ Q+ H N++ LHD YE +    +I EL  GGEL   L ++   +E +   +I+Q+L
Sbjct: 66  VSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI 332
            G++Y+H   IAH  L P ++++        H+ L DFGL+  I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 97.1 bits (240), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 87/155 (56%), Gaps = 6/155 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +LDG+ YLH + + H +++P+N+++   ++    +KLID G    +       +   
Sbjct: 121  IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  N+  V Y F 
Sbjct: 181  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 1069 EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDH 1102
            E  F + ++ A  F+  L+ K     +T+   + H
Sbjct: 239  EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 80.5 bits (197), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 9/143 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  N+  V Y F E  F + 
Sbjct: 186  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP--SEYMIKKRERAVFLGNRLKEFSDEY 1260
            ++ A  F+  +  +   KR T++E   + W+ P  ++  + +RE  V L N    F  +Y
Sbjct: 246  SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLEN----FKKQY 301
Query: 1261 HDLKNKQFTSDSLSSLHKTLTRS 1283
              ++ +   S S+ SL   LTRS
Sbjct: 302  --VRRRWKLSFSIVSLCNHLTRS 322

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score =  103 bits (258), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           + + + D YD G+ELG G   IV    E+S+G  YAAK +  + ++       +   + E
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ Q+ H N++ LHD YE +    +I EL  GGEL   L ++   +E +   +I+Q+L
Sbjct: 66  VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI 332
            G++Y+H   IAH  L P ++++        H+ L DFGL+  I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 96.3 bits (238), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 87/155 (56%), Gaps = 6/155 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +LDG+ YLH + + H +++P+N+++   ++    +KLID G    +       +   
Sbjct: 121  IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  N+  V Y F 
Sbjct: 181  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 1069 EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDH 1102
            E  F + ++ A  F+  L+ K     +T+   + H
Sbjct: 239  EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 77.4 bits (189), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  N+  V Y F E  F + 
Sbjct: 186  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP--SEYMIKKRERAVFLGNRLKEF 1256
            ++ A  F+  +  +   KR T++E   + W+ P  ++  + +RE  V L N  K++
Sbjct: 246  SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQY 301

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score =  103 bits (258), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           + + + D YD G+ELG G   IV    E+S+G  YAAK +  + ++       +   + E
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ Q+ H N++ LHD YE +    +I EL  GGEL   L ++   +E +   +I+Q+L
Sbjct: 66  VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI 332
            G++Y+H   IAH  L P ++++        H+ L DFGL+  I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 96.7 bits (239), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 87/155 (56%), Gaps = 6/155 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +LDG+ YLH + + H +++P+N+++   ++    +KLID G    +       +   
Sbjct: 121  IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  N+  V Y F 
Sbjct: 181  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 1069 EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDH 1102
            E  F + ++ A  F+  L+ K     +T+   + H
Sbjct: 239  EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 9/142 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  N+  V Y F E  F + 
Sbjct: 186  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP--SEYMIKKRERAVFLGNRLKEFSDEY 1260
            ++ A  F+  +  +   KR T++E   + W+ P  ++  + +RE  V L N  K++    
Sbjct: 246  SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQY---- 301
Query: 1261 HDLKNKQFTSDSLSSLHKTLTR 1282
              ++ +   + S+ SL   LTR
Sbjct: 302  --VRRRSKLAFSIVSLCNHLTR 321

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score =  103 bits (257), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           + + + D YD G+ELG G   IV    E+S+G  YAAK +  + ++       +   + E
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ Q+ H N++ LHD YE +    +I EL  GGEL   L ++   +E +   +I+Q+L
Sbjct: 66  VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI 332
            G++Y+H   IAH  L P ++++        H+ L DFGL+  I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 81/140 (57%), Gaps = 8/140 (5%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +LDG+ YLH + + H +++P+N+++   ++    +KLID G    +       +   
Sbjct: 121  IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  N+  V Y F+
Sbjct: 181  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 1070 YLF----KELTQEATRFLML 1085
              F     EL ++  R L++
Sbjct: 239  EEFFSHTSELAKDFIRKLLV 258

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  N+  V Y F E  F   
Sbjct: 186  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP--SEYMIKKRERAVFLGNRLKEFSDEY 1260
            ++ A  F+  +  +   KR T++E   + W+ P  ++  + +RE  V L N  K++    
Sbjct: 246  SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQY---- 301
Query: 1261 HDLKNKQFTSDSLSSLHKTLTR 1282
              ++ +   S S+ SL   LTR
Sbjct: 302  --VRRRWKLSFSIVSLCNHLTR 321

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score =  103 bits (257), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           + + + D YD G+ELG G   IV    E+S+G  YAAK +  + ++       +   + E
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ Q+ H N++ LHD YE +    +I EL  GGEL   L ++   +E +   +I+Q+L
Sbjct: 66  VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI 332
            G++Y+H   IAH  L P ++++        H+ L DFGL+  I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +LDG+ YLH + + H +++P+N+++   ++    +KLID G    +       +   
Sbjct: 121  IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  N+  V Y F 
Sbjct: 181  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 1069 EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDH 1102
            E  F   ++ A  F+  L+ K     +T+   + H
Sbjct: 239  EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  N+  V Y F E  F   
Sbjct: 186  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP--SEYMIKKRERAVFLGNRLKEFSDEY 1260
            ++ A  F+  +  +   KR T++E   + W+ P  ++  + +RE  V L N  K++    
Sbjct: 246  SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQY---- 301
Query: 1261 HDLKNKQFTSDSLSSLHKTLTR 1282
              ++ +   + S+ SL   LTR
Sbjct: 302  --VRRRSKLAFSIVSLCNHLTR 321

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score =  103 bits (257), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 100/165 (60%), Gaps = 8/165 (4%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +LDG+ YLH + + H +++P+N+++   +V + ++KLID G   ++       +   
Sbjct: 114  LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 173
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G+++ ET  N++ V Y F 
Sbjct: 174  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD 231
Query: 1069 EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
            E  F   ++ A  F+  L+ K     +T+A +++H  W +K ++R
Sbjct: 232  EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHS-W-IKAIRR 274

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 74.3 bits (181), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 1137 LFKTKE-QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1195
            +F T E  APE++  EP+  + D+WS GV+ Y+LLSGASPF G+++ ET  N++ V Y F
Sbjct: 171  IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 230
Query: 1196 -EYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
             E  F   ++ A  F+  +  + P +R T+ +  E+ W+
Sbjct: 231  DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWI 269

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score =  103 bits (257), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           + + + D YD G+ELG G   IV    E+S+G  YAAK +  + ++       +   + E
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ Q+ H N++ LHD YE +    +I EL  GGEL   L ++   +E +   +I+Q+L
Sbjct: 66  VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI 332
            G++Y+H   IAH  L P ++++        H+ L DFGL+  I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 95.9 bits (237), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 81/140 (57%), Gaps = 8/140 (5%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +LDG+ YLH + + H +++P+N+++   ++    +KLID G    +       +   
Sbjct: 121  IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  N+  V Y F+
Sbjct: 181  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 1070 YLF----KELTQEATRFLML 1085
              F     EL ++  R L++
Sbjct: 239  EEFFSHTSELAKDFIRKLLV 258

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 73.6 bits (179), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  N+  V Y F E  F   
Sbjct: 186  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235
            ++ A  F+  +  +   KR T++E   + W+ P
Sbjct: 246  SELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score =  102 bits (253), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 93/169 (55%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           R + + D YD G+ELG GV  +V    E+S+G  YAAK +  +  +       +   + E
Sbjct: 5   RQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 65  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
           +G+ Y+H L IAH  L P ++++     P  R + + DFGL+ +I  FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +L+G+ YLH   + H +++P+N+++   +V   ++K+ID G   ++       +   
Sbjct: 120  LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE
Sbjct: 180  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
               F   +  A  F+  L+ K     +T+ +++ H +   KD ++
Sbjct: 238  DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE   F   
Sbjct: 185  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            +  A  F+  +  + P KR T+++  ++ W+ P +
Sbjct: 245  SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score =  101 bits (252), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
           ++D ++   ELGRG T IVY   ++ + + YA KV+  K    K + + E+ ++ +L H 
Sbjct: 51  LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVL--KKTVDKKIVRTEIGVLLRLSHP 108
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           N+++L + +ET    +++ EL  GGEL   +  + YY+E D A  ++Q+L  + Y+H   
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENG 168
Query: 301 IAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI 332
           I H  L P +LL A P     L + DFGLS+ +
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            A  V  +L+ + YLH  G+ H +++P+N++ A+      +K+ D G ++ V     +   
Sbjct: 151  ADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTV 210
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
              TP   + APE+L      P+ D+WS G++ Y+LL G  PF
Sbjct: 211  CGTPG--YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score =  101 bits (252), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 99/165 (60%), Gaps = 8/165 (4%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +LDG+ YLH + + H +++P+N+++   +V + ++KLID G   ++       +   
Sbjct: 135  LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 194
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G+++ ET  N++ V Y F 
Sbjct: 195  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD 252
Query: 1069 EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
            E  F   ++ A  F+  L+ K     + +A +++H  W +K ++R
Sbjct: 253  EEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHS-W-IKAIRR 295

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 1137 LFKTKE-QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1195
            +F T E  APE++  EP+  + D+WS GV+ Y+LLSGASPF G+++ ET  N++ V Y F
Sbjct: 192  IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 251
Query: 1196 -EYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
             E  F   ++ A  F+  +  + P +R  + +  E+ W+
Sbjct: 252  DEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 290

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score =  100 bits (249), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 93/155 (60%), Gaps = 6/155 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVM--ASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +LDG+ YLH + + H +++P+N+++   +V + ++KLID G   ++       +   
Sbjct: 121  LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G+++ ET  N++ V Y F 
Sbjct: 181  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD 238
Query: 1069 EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDH 1102
            E  F   ++ A  F+  L+ K     + +A +++H
Sbjct: 239  EEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEH 273

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 72.0 bits (175), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G+++ ET  N++ V Y F E  F   
Sbjct: 186  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 245
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            ++ A  F+  +  + P +R  + +  E+ W+
Sbjct: 246  SELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 276

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score =  100 bits (249), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 10/200 (5%)
Query: 133 AYDFGDELGRGV--TGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDE 190
            YD  DE G+ V   GT+S +   +V D   +Y        + V+ +   + D YD  +E
Sbjct: 6   GYDV-DEQGKIVRGKGTVSSNYDNYVFDIWKQYY------PQPVEIKHDHVLDHYDIHEE 58
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
           LG G  G+V+   ER++G N+AAK +       K   + E+  M+ L H  LV LHD++E
Sbjct: 59  LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 251 TKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
             +   +I E   GGEL   +  + +  +E +   Y+RQ+  GL +MH  +  HL L P 
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 178
Query: 310 DLLVAHPGGRHLLLTDFGLS 329
           +++        L L DFGL+
Sbjct: 179 NIMFTTKRSNELKLIDFGLT 198

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 92.8 bits (229), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 78/130 (60%), Gaps = 3/130 (2%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            V  GL ++H     HL+++P+N++  + RS ++KLID G T  +    ++   + T   E
Sbjct: 158  VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV--KVTTGTAE 215
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFK 1073
            FAAPEV   +P+   TD+WS GVL+Y+LLSG SPF G+++ ET +NV    +   +  F 
Sbjct: 216  FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS 275
Query: 1074 ELTQEATRFL 1083
             ++++   F+
Sbjct: 276  GISEDGKDFI 285

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
            APEV   +P+   TD+WS GVL+Y+LLSG SPF G+++ ET +NV    +   +  F  +
Sbjct: 218  APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGI 277
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235
            +++   F+  +    P  R T+ +  E+ WL P
Sbjct: 278  SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP 310

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score =  100 bits (248), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 10/200 (5%)
Query: 133 AYDFGDELGRGV--TGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDE 190
            YD  DE G+ V   GT+S +   +V D   +Y        + V+ +   + D YD  +E
Sbjct: 112 GYDV-DEQGKIVRGKGTVSSNYDNYVFDIWKQY------YPQPVEIKHDHVLDHYDIHEE 164
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
           LG G  G+V+   ER++G N+AAK +       K   + E+  M+ L H  LV LHD++E
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 251 TKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
             +   +I E   GGEL   +  + +  +E +   Y+RQ+  GL +MH  +  HL L P 
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 284
Query: 310 DLLVAHPGGRHLLLTDFGLS 329
           +++        L L DFGL+
Sbjct: 285 NIMFTTKRSNELKLIDFGLT 304

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 78/130 (60%), Gaps = 3/130 (2%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            V  GL ++H     HL+++P+N++  + RS ++KLID G T  +    ++   + T   E
Sbjct: 264  VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV--KVTTGTAE 321
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFK 1073
            FAAPEV   +P+   TD+WS GVL+Y+LLSG SPF G+++ ET +NV    +   +  F 
Sbjct: 322  FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS 381
Query: 1074 ELTQEATRFL 1083
             ++++   F+
Sbjct: 382  GISEDGKDFI 391

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
            APEV   +P+   TD+WS GVL+Y+LLSG SPF G+++ ET +NV    +   +  F  +
Sbjct: 324  APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGI 383
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPS 1236
            +++   F+  +    P  R T+ +  E+ WL P 
Sbjct: 384  SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 417

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score =  100 bits (248), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           R + + D YD G+ELG G   +V    E+S+G  YAAK +  +  +       +   + E
Sbjct: 5   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 65  VSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
           +G+ Y+H L IAH  L P ++++     P  R + + DFGL+ +I  FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +L+G+ YLH   + H +++P+N+++   +V   ++K+ID G   ++       +   
Sbjct: 120  LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE
Sbjct: 180  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
               F   +  A  F+  L+ K     +T+ +++ H +   KD ++
Sbjct: 238  DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE   F   
Sbjct: 185  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            +  A  F+  +  + P KR T+++  ++ W+ P +
Sbjct: 245  SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           R + + D YD G+ELG G   +V    E+S+G  YAAK +  +  +       +   + E
Sbjct: 4   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 63
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 64  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 123
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
           +G+ Y+H L IAH  L P ++++     P  R + + DFGL+ +I  FG
Sbjct: 124 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 170

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +L+G+ YLH   + H +++P+N+++   +V   ++K+ID G   ++       +   
Sbjct: 119  LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 178
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE
Sbjct: 179  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 236
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
               F   +  A  F+  L+ K     +T+ +++ H +   KD ++
Sbjct: 237  DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 281

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE   F   
Sbjct: 184  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            +  A  F+  +  + P KR T+++  ++ W+ P +
Sbjct: 244  SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 278

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 99.4 bits (246), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           R + + D YD G+ELG G   +V    E+S+G  YAAK +  +  +       +   + E
Sbjct: 5   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 65  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
           +G+ Y+H L IAH  L P ++++     P  R + + DFGL+ +I  FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +L+G+ YLH   + H +++P+N+++   +V   ++K+ID G   ++       +   
Sbjct: 120  LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE
Sbjct: 180  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
               F   +  A  F+  L+ K     +T+ +++ H +   KD ++
Sbjct: 238  DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE   F   
Sbjct: 185  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            +  A  F+  +  + P KR T+++  ++ W+ P +
Sbjct: 245  SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 99.4 bits (246), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           R + + D YD G+ELG G   +V    E+S+G  YAAK +  +  +       +   + E
Sbjct: 5   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 65  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
           +G+ Y+H L IAH  L P ++++     P  R + + DFGL+ +I  FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +L+G+ YLH   + H +++P+N+++   +V   ++K+ID G   ++       +   
Sbjct: 120  LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE
Sbjct: 180  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
               F   +  A  F+  L+ K     +T+ +++ H +   KD ++
Sbjct: 238  DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE   F   
Sbjct: 185  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            +  A  F+  +  + P KR T+++  ++ W+ P +
Sbjct: 245  SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 99.4 bits (246), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           R + + D YD G+ELG G   +V    E+S+G  YAAK +  +  +       +   + E
Sbjct: 4   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 63
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 64  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 123
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
           +G+ Y+H L IAH  L P ++++     P  R + + DFGL+ +I  FG
Sbjct: 124 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 170

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +L+G+ YLH   + H +++P+N+++   +V   ++K+ID G   ++       +   
Sbjct: 119  LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 178
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE
Sbjct: 179  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 236
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
               F   +  A  F+  L+ K     +T+ +++ H +   KD ++
Sbjct: 237  DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 281

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE   F   
Sbjct: 184  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            +  A  F+  +  + P KR T+++  ++ W+ P +
Sbjct: 244  SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 278

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 99.4 bits (246), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           R + + D YD G+ELG G   +V    E+S+G  YAAK +  +  +       +   + E
Sbjct: 5   RQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 65  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
           +G+ Y+H L IAH  L P ++++     P  R + + DFGL+ +I  FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +L+G+ YLH   + H +++P+N+++   +V   ++K+ID G   ++       +   
Sbjct: 120  LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE
Sbjct: 180  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
               F   +  A  F+  L+ K     +T+ +++ H +   KD ++
Sbjct: 238  DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE   F   
Sbjct: 185  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            +  A  F+  +  + P KR T+++  ++ W+ P +
Sbjct: 245  SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 99.4 bits (246), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           R + + D YD G+ELG G   +V    E+S+G  YAAK +  +  +       +   + E
Sbjct: 5   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 65  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
           +G+ Y+H L IAH  L P ++++     P  R + + DFGL+ +I  FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +L+G+ YLH   + H +++P+N+++   +V   ++K+ID G   ++       +   
Sbjct: 120  LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE
Sbjct: 180  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
               F   +  A  F+  L+ K     +T+ +++ H +   KD ++
Sbjct: 238  DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE   F   
Sbjct: 185  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            +  A  F+  +  + P KR T+++  ++ W+ P +
Sbjct: 245  SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           R + + D YD G+ELG G   +V    E+S+G  YAAK +  +  +       +   + E
Sbjct: 5   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 65  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
           +G+ Y+H L IAH  L P ++++     P  R + + DFGL+ +I  FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +L+G+ YLH   + H +++P+N+++   +V   ++K+ID G   ++       +   
Sbjct: 120  LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE
Sbjct: 180  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
               F   +  A  F+  L+ K     +T+ +++ H +   KD ++
Sbjct: 238  DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE   F   
Sbjct: 185  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            +  A  F+  +  + P KR T+++  ++ W+ P +
Sbjct: 245  SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           R + + D YD G+ELG G   +V    E+S+G  YAAK +  +  +       +   + E
Sbjct: 5   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 65  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
           +G+ Y+H L IAH  L P ++++     P  R + + DFGL+ +I  FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 92.8 bits (229), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 93/165 (56%), Gaps = 6/165 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +L+G+ YLH   + H +++P+N+++   +V   ++K+ID G   ++       +   
Sbjct: 120  LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP   F APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE
Sbjct: 180  TP--AFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
               F   +  A  F+  L+ K     +T+ +++ H +   KD ++
Sbjct: 238  DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE   F   
Sbjct: 185  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            +  A  F+  +  + P KR T+++  ++ W+ P +
Sbjct: 245  SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQLC 238
            +D YD  +ELG+G   +V   V +++G  +AAK++  K    +   K   E  I  +L 
Sbjct: 3   FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+VRLHDS + +    ++ +L  GGEL   +  + +Y+E D +H I+Q+L  + Y H 
Sbjct: 63  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI 332
             I H  L P +LL+A    G  + L DFGL+  +
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 157

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 70.5 bits (171), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            ++C+  +L+ + Y H  G+ H N++P+N+++AS  +   VKL D G    V         
Sbjct: 107  SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 166
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
              TP   + +PEVL ++P     D+W+ GV+ Y+LL G  PF
Sbjct: 167  AGTPG--YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +      +    Y +    +  +
Sbjct: 174  SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 233
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            T EA   +  +    P KR T ++  +  W+   E
Sbjct: 234  TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 268

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQLC 238
            +D YD  +ELG+G   +V   V +++G  +AAK++  K    +   K   E  I  +L 
Sbjct: 4   FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+VRLHDS + +    ++ +L  GGEL   +  + +Y+E D +H I+Q+L  + Y H 
Sbjct: 64  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI 332
             I H  L P +LL+A    G  + L DFGL+  +
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 70.5 bits (171), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            ++C+  +L+ + Y H  G+ H N++P+N+++AS  +   VKL D G    V         
Sbjct: 108  SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 167
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
              TP   + +PEVL ++P     D+W+ GV+ Y+LL G  PF
Sbjct: 168  AGTPG--YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +      +    Y +    +  +
Sbjct: 175  SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 234
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            T EA   +  +    P KR T ++  +  W+   E
Sbjct: 235  TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 269

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQLC 238
            +D YD  +ELG+G   +V   V +++G  +AAK++  K    +   K   E  I  +L 
Sbjct: 4   FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+VRLHDS + +    ++ +L  GGEL   +  + +Y+E D +H I+Q+L  + Y H 
Sbjct: 64  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI 332
             I H  L P +LL+A    G  + L DFGL+  +
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 70.5 bits (171), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            ++C+  +L+ + Y H  G+ H N++P+N+++AS  +   VKL D G    V         
Sbjct: 108  SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 167
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
              TP   + +PEVL ++P     D+W+ GV+ Y+LL G  PF
Sbjct: 168  AGTPG--YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +      +    Y +    +  +
Sbjct: 175  SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 234
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            T EA   +  +    P KR T ++  +  W+   E
Sbjct: 235  TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 269

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           R + + D YD G+ELG G   +V    E+S+G  YAAK +  +  +       +   + E
Sbjct: 5   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 65  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
           +G+ Y+H L IAH  L P ++++     P  R + + DFGL+ +I  FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +L+G+ YLH   + H +++P+N+++   +V   ++K+ID G   ++       +   
Sbjct: 120  LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE
Sbjct: 180  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
               F   +  A  F+  L+ K     +T+ +++ H +   KD ++
Sbjct: 238  DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE   F   
Sbjct: 185  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            +  A  F+  +  + P KR T+++  ++ W+ P +
Sbjct: 245  SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           R + + D YD G+ELG G   +V    E+S+G  YAAK +  +  +       +   + E
Sbjct: 5   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 65  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
           +G+ Y+H L IAH  L P ++++     P  R + + DFGL+ +I  FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 94.0 bits (232), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 74/120 (61%), Gaps = 4/120 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +L+G+ YLH   + H +++P+N+++   +V   ++K+ID G   ++       +   
Sbjct: 120  LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE
Sbjct: 180  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE   F   
Sbjct: 185  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235
            +  A  F+  +  + P KR T+++  ++ W+ P
Sbjct: 245  SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           R + + D YD G+ELG G   +V    E+S+G  YAAK +  +  +       +   + E
Sbjct: 5   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 65  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
           +G+ Y+H L IAH  L P ++++     P  R + + DFGL+ +I  FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 94.0 bits (232), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 74/120 (61%), Gaps = 4/120 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +L+G+ YLH   + H +++P+N+++   +V   ++K+ID G   ++       +   
Sbjct: 120  LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE
Sbjct: 180  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE   F   
Sbjct: 185  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235
            +  A  F+  +  + P KR T+++  ++ W+ P
Sbjct: 245  SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 98.6 bits (244), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDIMNQLC 238
            +D YD  +ELG+G   +V   V +++G  +AAK++  K    +   K   E  I  +L 
Sbjct: 27  FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 86
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+VRLHDS + +    ++ +L  GGEL   +  + +Y+E D +H I+Q+L  + Y H 
Sbjct: 87  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLS 329
             I H  L P +LL+A    G  + L DFGL+
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLA 178

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            ++C+  +L+ + Y H  G+ H N++P+N+++AS  +   VKL D G    V         
Sbjct: 131  SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 190
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
              TP   + +PEVL ++P     D+W+ GV+ Y+LL G  PF
Sbjct: 191  AGTPG--YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +      +    Y +    +  +
Sbjct: 198  SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 257
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            T EA   +  +    P KR T ++  +  W+   E
Sbjct: 258  TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 292

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 98.6 bits (244), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY------KSLFKNE 230
           R + + D YD G+ELG G   +V    E+S+G  YAAK +  +  +       +   + E
Sbjct: 5   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 65  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG 336
           +G+ Y+H L IAH  L P ++++     P  R + + DFGL+ +I  FG
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR-IKIIDFGLAHKI-DFG 171

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +  +L+G+ YLH   + H +++P+N+++   +V   ++K+ID G   ++       +   
Sbjct: 120  LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE
Sbjct: 180  TP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 1070 -YLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
               F   +  A  F+  L+ K     +T+ +++ H +   KD ++
Sbjct: 238  DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 1137 LFKTKE-QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1195
            +F T E  APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y F
Sbjct: 177  IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 1196 E-YLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
            E   F   +  A  F+  +  + P KR T+++  ++ W+ P +
Sbjct: 237  EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 98.6 bits (244), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 90/158 (56%), Gaps = 2/158 (1%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK-SLFKNELDI 233
           K + + I   ++F + LG G    V  A E+++G+ +A K +  K  + K S  +NE+ +
Sbjct: 14  KKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAV 73
Query: 234 MNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
           + ++ H N+V L D YE+ +   ++ +L  GGEL   +  + +YTE D +  IRQ+L  +
Sbjct: 74  LRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAV 133
Query: 294 DYMHRLSIAHLGLTPGDLL-VAHPGGRHLLLTDFGLSR 330
            Y+HR+ I H  L P +LL  +      ++++DFGLS+
Sbjct: 134 YYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 74.3 bits (181), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Query: 945  THKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLG 1002
            T KDA   +  VLD + YLH  G+ H +++P+N++  S     ++ + D G ++   K  
Sbjct: 118  TEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
             +     TP   + APEVLA++P     D WS GV+AY+LL G  PF  +++ +  + + 
Sbjct: 178  VMSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQIL 235
Query: 1063 FVRYRFE 1069
               Y F+
Sbjct: 236  KAEYEFD 242

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEVLA++P     D WS GV+AY+LL G  PF  +++ +  + +    Y F+   + ++
Sbjct: 190  APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDI 249
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
            +  A  F+  + ++ P KR T E+   + W+ 
Sbjct: 250  SDSAKDFIRNLMEKDPNKRYTCEQAARHPWIA 281

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK--SLFKNELDIMNQLC 238
           +TD Y   +ELG+G   +V   ++  +G+ YAAK++  K    +     + E  I   L 
Sbjct: 2   MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+VRLHDS   +    ++ +L  GGEL   +  + YY+E D +H I+Q+L  +++ H 
Sbjct: 62  HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLS 329
             I H  L P +LL+A    G  + L DFGL+
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            ++C+  +L+ + + H  G+ H +++P+N+++AS  +   VKL D G    V         
Sbjct: 106  SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
                 P + +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +    Q +    Y 
Sbjct: 166  F-AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 224
Query: 1068 F 1068
            F
Sbjct: 225  F 225

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +    Q +    Y F    +  +
Sbjct: 174  SPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 233
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
            T EA   +  +    P KR T  E  ++ W+ 
Sbjct: 234  TPEAKDLINKMLTINPAKRITASEALKHPWIC 265

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 83/134 (61%), Gaps = 4/134 (2%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSV-QVKLIDLGCTQRVTKLGTLIHPINT 1010
            +  +L+G+ YLH   + HL+++P N++++S+  +  +K++D G ++++     L   + T
Sbjct: 137  IKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGT 196
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-E 1069
            P  E+ APE+L  +PI   TD+W+ G++AY+LL+  SPF G+   ET  N++ V   + E
Sbjct: 197  P--EYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSE 254
Query: 1070 YLFKELTQEATRFL 1083
              F  ++Q AT F+
Sbjct: 255  ETFSSVSQLATDFI 268

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
            APE+L  +PI   TD+W+ G++AY+LL+  SPF G+   ET  N++ V   + E  F  +
Sbjct: 201  APEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSV 260
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            +Q AT F+  +  + P KRPT E C  + WL
Sbjct: 261  SQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK--SLFKNELDIMNQLC 238
           +TD Y   +++G+G   +V   V+  +G  YAAK++  K    +     + E  I   L 
Sbjct: 2   MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+VRLHDS   +    ++ +L  GGEL   +  + YY+E D +H I+Q+L  + + H+
Sbjct: 62  HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLS 329
           + + H  L P +LL+A    G  + L DFGL+
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            ++C+  +L+ + + H  G+ H +++P+N+++AS  +   VKL D G    V         
Sbjct: 106  SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
                 P + +PEVL +E      D+W+ GV+ Y+LL G  PF  + + +  Q +    Y 
Sbjct: 166  F-AGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 224
Query: 1068 F 1068
            F
Sbjct: 225  F 225

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            +PEVL +E      D+W+ GV+ Y+LL G  PF  + + +  Q +    Y F    +  +
Sbjct: 174  SPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTV 233
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
            T EA   +  +    P KR T  E  ++ W+ 
Sbjct: 234  TPEAKNLINQMLTINPAKRITAHEALKHPWVC 265

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK--SLFKNELDIMNQLC 238
            TD Y   +ELG+G   +V   V+++  + YAAK++  K    +     + E  I   L 
Sbjct: 29  FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLK 88
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+VRLHDS   +    ++ +L  GGEL   +  + YY+E D +H I Q+L  ++++H+
Sbjct: 89  HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLS 329
             I H  L P +LL+A    G  + L DFGL+
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            ++C+  +L+ + ++H   + H +++P+N+++AS  +   VKL D G    V         
Sbjct: 133  SHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG 192
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
                 P + +PEVL ++P     D+W+ GV+ Y+LL G  PF  + + +  Q +    Y 
Sbjct: 193  F-AGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 251
Query: 1068 F 1068
            F
Sbjct: 252  F 252

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            +PEVL ++P     D+W+ GV+ Y+LL G  PF  + + +  Q +    Y F    +  +
Sbjct: 201  SPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTV 260
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
            T EA   +  +    P KR T ++  ++ W+ 
Sbjct: 261  TPEAKNLINQMLTINPAKRITADQALKHPWVC 292

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK--SLFKNELDIMNQLC 238
           +TD Y   +ELG+G   +V   ++  +G+ YAAK++  K    +     + E  I   L 
Sbjct: 2   MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+VRLHDS   +    ++ +L  GGEL   +  + YY+E D +H I+Q+L  +++ H 
Sbjct: 62  HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 299 LSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLS 329
             I H  L P +LL+A    G  + L DFGL+
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            ++C+  +L+ + + H  G+ H +++P+N+++AS  +   VKL D G    V         
Sbjct: 106  SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
                 P + +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +    Q +    Y 
Sbjct: 166  F-AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 224
Query: 1068 F 1068
            F
Sbjct: 225  F 225

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +    Q +    Y F    +  +
Sbjct: 174  SPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 233
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
            T EA   +  +    P KR T  E  ++ W+ 
Sbjct: 234  TPEAKDLINKMLTINPAKRITASEALKHPWIC 265

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 90.5 bits (223), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 1/155 (0%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQ 236
           +T  I   + F + LG G    V+   +R +G+ +A K +        S  +NE+ ++ +
Sbjct: 3   QTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKK 62
Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
           + H N+V L D YE+   + ++ +L  GGEL   +  +  YTE D +  I+Q+LS + Y+
Sbjct: 63  IKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYL 122
Query: 297 HRLSIAHLGLTPGDLLVAHP-GGRHLLLTDFGLSR 330
           H   I H  L P +LL   P     +++TDFGLS+
Sbjct: 123 HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 74.3 bits (181), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 945  THKDAYCVTS-VLDGLQYLHWRGLCHLNIEPDNVV-MASVRSVQVKLIDLGCTQRVTKLG 1002
            T KDA  V   VL  ++YLH  G+ H +++P+N++ +    + ++ + D G + ++ + G
Sbjct: 104  TEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS-KMEQNG 162
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
             +     TP   + APEVLA++P     D WS GV+ Y+LL G  PF  ++E +  + + 
Sbjct: 163  IMSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIK 220
Query: 1063 FVRYRFEYLF-KELTQEATRFL 1083
               Y FE  F  ++++ A  F+
Sbjct: 221  EGYYEFESPFWDDISESAKDFI 242

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF-KEL 1202
            APEVLA++P     D WS GV+ Y+LL G  PF  ++E +  + +    Y FE  F  ++
Sbjct: 175  APEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDI 234
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            ++ A  F+  + ++ P +R T E+   + W+
Sbjct: 235  SESAKDFICHLLEKDPNERYTCEKALSHPWI 265

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 90.1 bits (222), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK--SLFKNELDIMNQLC 238
            T+ Y   +ELG+G   +V   V+  +G+ YAA ++  K    +     + E  I   L 
Sbjct: 9   FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+VRLHDS   +    +I +L  GGEL   +  + YY+E D +H I+Q+L  + + H+
Sbjct: 69  HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 128
Query: 299 LSIAHLGLTPGDLLVAHP-GGRHLLLTDFGLS 329
           + + H  L P +LL+A    G  + L DFGL+
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            ++C+  +L+ + + H  G+ H N++P+N+++AS ++   VKL D G    V         
Sbjct: 113  SHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 172
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
                 P + +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +    Q +    Y 
Sbjct: 173  F-AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 231
Query: 1068 F 1068
            F
Sbjct: 232  F 232

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +    Q +    Y F    +  +
Sbjct: 181  SPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 240
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            T EA   +  +    P KR T  E  ++ W+
Sbjct: 241  TPEAKDLINKMLTINPSKRITAAEALKHPWI 271

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK--SLFK 228
           G  + T        Y   +ELG+G   +V   V+  +G+ YAAK++  K    +     +
Sbjct: 10  GVDLGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLE 69
Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
            E  I   L H N+VRLHDS   +    +I +L  GGEL   +  + YY+E D +H I+Q
Sbjct: 70  REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQ 129
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHP-GGRHLLLTDFGLS 329
           +L  + + H++ + H  L P +LL+A    G  + L DFGL+
Sbjct: 130 ILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA 171

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            ++C+  +L+ + + H  G+ H +++P+N+++AS ++   VKL D G    V         
Sbjct: 124  SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 183
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
                 P + +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +    Q +    Y 
Sbjct: 184  F-AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 242
Query: 1068 F 1068
            F
Sbjct: 243  F 243

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +    Q +    Y F    +  +
Sbjct: 192  SPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 251
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            T EA   +  +    P KR T  E  ++ W+
Sbjct: 252  TPEAKDLINKMLTINPSKRITAAEALKHPWI 282

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC 238
           K + + Y   ++LGRG  GIV+  VE SS + Y AK +  KG   + L K E+ I+N   
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIAR 59
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMH 297
           HRN++ LH+S+E+ +   +I E   G ++   +   ++   E +I  Y+ Q+   L ++H
Sbjct: 60  HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
             +I H  + P +++        + + +FG +R++
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 87.4 bits (215), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
            V  V + LQ+LH   + H +I P+N++  + RS  +K+I+ G   R  K G     + T 
Sbjct: 108  VHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFG-QARQLKPGDNFRLLFTA 166
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EY 1070
             PE+ APEV   + +   TD+WS G L YVLLSG +PF  ++  +  +N+    Y F E 
Sbjct: 167  -PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEE 225
Query: 1071 LFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFR 1119
             FKE++ EA  F+  L+ K     +T +  + H  W  + ++R +    R
Sbjct: 226  AFKEISIEAMDFVDRLLVKERKSRMTASEALQHP-WLKQKIERVSTKVIR 274

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
            APEV   + +   TD+WS G L YVLLSG +PF  ++  +  +N+    Y F E  FKE+
Sbjct: 171  APEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEI 230
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + EA  F+  +  +    R T  E  ++ WL
Sbjct: 231  SIEAMDFVDRLLVKERKSRMTASEALQHPWL 261

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 87.8 bits (216), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK-SLFKNELDIMN 235
           + + I D YDF D LG G    V  A ++ + +  A K +  K  + K    +NE+ +++
Sbjct: 12  QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLH 71
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
           ++ H N+V L D YE+     +I +L  GGEL   +  + +YTE D +  I Q+L  + Y
Sbjct: 72  KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 296 MHRLSIAHLGLTPGDLL-VAHPGGRHLLLTDFGLSR 330
           +H L I H  L P +LL  +      ++++DFGLS+
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 73.2 bits (178), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 945  THKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLG 1002
            T +DA   +  VLD ++YLH  G+ H +++P+N++  S+    ++ + D G ++      
Sbjct: 114  TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
             L     TP   + APEVLA++P     D WS GV+AY+LL G  PF  +++ +  + + 
Sbjct: 174  VLSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
Query: 1063 FVRYRFEY-LFKELTQEATRFL 1083
               Y F+   + +++  A  F+
Sbjct: 232  KAEYEFDSPYWDDISDSAKDFI 253

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 1108 KDLKRETNYTFRLSAKNVIGWSEKGI-----PSALFKTKEQ-----APEVLAEEPIFPQT 1157
            +DLK E    + L   + I  S+ G+     P ++  T        APEVLA++P     
Sbjct: 140  RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 1158 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKELTQEATRFLMLIFKR 1216
            D WS GV+AY+LL G  PF  +++ +  + +    Y F+   + +++  A  F+  + ++
Sbjct: 200  DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 1217 APGKRPTVEECHENRWLVPSEYMIKKRERAV 1247
             P KR T E+  ++ W+     + K   ++V
Sbjct: 260  DPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 87.4 bits (215), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 6/174 (3%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----SL 226
           G  V+  T   +D Y     LG+G  G V    ++ +G+  A KV++ +  + K    SL
Sbjct: 20  GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 79
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI 286
            + E+ ++ QL H N+++L++ +E K  F ++ E+  GGEL   +  +  ++E D A  I
Sbjct: 80  LR-EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 138
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLLLTDFGLSRRITSFGKLN 339
           RQ+LSG+ YMH+  I H  L P +LL+ +     ++ + DFGLS    +  K+ 
Sbjct: 139 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK 192

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 70.5 bits (171), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  VL G+ Y+H   + H +++P+N+++ S  +   +++ID G +        +   
Sbjct: 135  ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 194
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            I T    + APEVL       + DVWS GV+ Y+LLSG  PF G +E +  + V   +Y 
Sbjct: 195  IGTAY--YIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 251
Query: 1068 FEY-LFKELTQEATRFL--MLIFKHEVDWITLANNIDHEF 1104
            FE   +K++++ A   +  ML +   +  I+  + +DHE+
Sbjct: 252  FELPQWKKVSESAKDLIRKMLTYVPSMR-ISARDALDHEW 290

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEVL       + DVWS GV+ Y+LLSG  PF G +E +  + V   +Y FE   +K++
Sbjct: 202  APEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 260
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            ++ A   +  +    P  R +  +  ++ W+
Sbjct: 261  SESAKDLIRKMLTYVPSMRISARDALDHEWI 291

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 87.0 bits (214), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----SL 226
           G  V+  T   +D Y     LG+G  G V    ++ +G+  A KV++ +  + K    SL
Sbjct: 14  GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI 286
            + E+ ++ QL H N+++L++ +E K  F ++ E+  GGEL   +  +  ++E D A  I
Sbjct: 74  LR-EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 132
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLLLTDFGLSRRITSFGKL 338
           RQ+LSG+ YMH+  I H  L P +LL+ +     ++ + DFGLS    +  K+
Sbjct: 133 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 185

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 70.5 bits (171), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  VL G+ Y+H   + H +++P+N+++ S  +   +++ID G +        +   
Sbjct: 129  ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 188
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            I T    + APEVL       + DVWS GV+ Y+LLSG  PF G +E +  + V   +Y 
Sbjct: 189  IGTAY--YIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 245
Query: 1068 FEY-LFKELTQEATRFL--MLIFKHEVDWITLANNIDHEF 1104
            FE   +K++++ A   +  ML +   +  I+  + +DHE+
Sbjct: 246  FELPQWKKVSESAKDLIRKMLTYVPSM-RISARDALDHEW 284

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEVL       + DVWS GV+ Y+LLSG  PF G +E +  + V   +Y FE   +K++
Sbjct: 196  APEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 254
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            ++ A   +  +    P  R +  +  ++ W+
Sbjct: 255  SESAKDLIRKMLTYVPSMRISARDALDHEWI 285

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 86.7 bits (213), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK-SLFKNELDIMN 235
           + + I D YDF D LG G    V  A ++ + +  A K +  +  + K    +NE+ +++
Sbjct: 12  QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
           ++ H N+V L D YE+     +I +L  GGEL   +  + +YTE D +  I Q+L  + Y
Sbjct: 72  KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 296 MHRLSIAHLGLTPGDLL-VAHPGGRHLLLTDFGLSR 330
           +H L I H  L P +LL  +      ++++DFGLS+
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 73.2 bits (178), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Query: 945  THKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLG 1002
            T +DA   +  VLD ++YLH  G+ H +++P+N++  S+    ++ + D G ++      
Sbjct: 114  TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
             L     TP   + APEVLA++P     D WS GV+AY+LL G  PF  +++ +  + + 
Sbjct: 174  VLSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
Query: 1063 FVRYRFE 1069
               Y F+
Sbjct: 232  KAEYEFD 238

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 1108 KDLKRETNYTFRLSAKNVIGWSEKGI-----PSALFKTKEQ-----APEVLAEEPIFPQT 1157
            +DLK E    + L   + I  S+ G+     P ++  T        APEVLA++P     
Sbjct: 140  RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 1158 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKELTQEATRFLMLIFKR 1216
            D WS GV+AY+LL G  PF  +++ +  + +    Y F+   + +++  A  F+  + ++
Sbjct: 200  DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 1217 APGKRPTVEECHENRWLVPSEYMIKKRERAV 1247
             P KR T E+  ++ W+     + K   ++V
Sbjct: 260  DPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 86.7 bits (213), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK-SLFKNELDIMN 235
           + + I D YDF D LG G    V  A ++ + +  A K +  +  + K    +NE+ +++
Sbjct: 12  QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
           ++ H N+V L D YE+     +I +L  GGEL   +  + +YTE D +  I Q+L  + Y
Sbjct: 72  KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 296 MHRLSIAHLGLTPGDLL-VAHPGGRHLLLTDFGLSR 330
           +H L I H  L P +LL  +      ++++DFGLS+
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 73.2 bits (178), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Query: 945  THKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLG 1002
            T +DA   +  VLD ++YLH  G+ H +++P+N++  S+    ++ + D G ++      
Sbjct: 114  TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
             L     TP   + APEVLA++P     D WS GV+AY+LL G  PF  +++ +  + + 
Sbjct: 174  VLSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
Query: 1063 FVRYRFE 1069
               Y F+
Sbjct: 232  KAEYEFD 238

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 1108 KDLKRETNYTFRLSAKNVIGWSEKGI-----PSALFKTKEQ-----APEVLAEEPIFPQT 1157
            +DLK E    + L   + I  S+ G+     P ++  T        APEVLA++P     
Sbjct: 140  RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 1158 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKELTQEATRFLMLIFKR 1216
            D WS GV+AY+LL G  PF  +++ +  + +    Y F+   + +++  A  F+  + ++
Sbjct: 200  DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 1217 APGKRPTVEECHENRWLVPSEYMIKKRERAV 1247
             P KR T E+  ++ W+     + K   ++V
Sbjct: 260  DPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----SL 226
           G  V+  T   +D Y     LG+G  G V    ++ +G+  A KV++ +  + K    SL
Sbjct: 37  GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 96
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI 286
            + E+ ++ QL H N+++L++ +E K  F ++ E+  GGEL   +  +  ++E D A  I
Sbjct: 97  LR-EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 155
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLLLTDFGLSRRITSFGKL 338
           RQ+LSG+ YMH+  I H  L P +LL+ +     ++ + DFGLS    +  K+
Sbjct: 156 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 208

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  VL G+ Y+H   + H +++P+N+++ S  +   +++ID G +        +   
Sbjct: 152  ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 211
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            I T    + APEVL       + DVWS GV+ Y+LLSG  PF G +E +  + V   +Y 
Sbjct: 212  IGTAY--YIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 268
Query: 1068 FEY-LFKELTQEATRFL--MLIFKHEVDWITLANNIDHEF 1104
            FE   +K++++ A   +  ML +   +  I+  + +DHE+
Sbjct: 269  FELPQWKKVSESAKDLIRKMLTYVPSM-RISARDALDHEW 307

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEVL       + DVWS GV+ Y+LLSG  PF G +E +  + V   +Y FE   +K++
Sbjct: 219  APEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 277
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            ++ A   +  +    P  R +  +  ++ W+
Sbjct: 278  SESAKDLIRKMLTYVPSMRISARDALDHEWI 308

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK-SLFKNELDIMN 235
           + + I D YDF D LG G    V  A ++ + +  A K +  +  + K    +NE+ +++
Sbjct: 12  QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
           ++ H N+V L D YE+     +I +L  GGEL   +  + +YTE D +  I Q+L  + Y
Sbjct: 72  KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 296 MHRLSIAHLGLTPGDLL-VAHPGGRHLLLTDFGLSR 330
           +H L I H  L P +LL  +      ++++DFGLS+
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Query: 945  THKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLG 1002
            T +DA   +  VLD ++YLH  G+ H +++P+N++  S+    ++ + D G ++      
Sbjct: 114  TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
             L     TP   + APEVLA++P     D WS GV+AY+LL G  PF  +++ +  + + 
Sbjct: 174  VLSTACGTPG--YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
Query: 1063 FVRYRFE 1069
               Y F+
Sbjct: 232  KAEYEFD 238

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 63.5 bits (153), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 1108 KDLKRETNYTFRLSAKNVIGWSEKGI-----PSALFKTKEQ-----APEVLAEEPIFPQT 1157
            +DLK E    + L   + I  S+ G+     P ++  T        APEVLA++P     
Sbjct: 140  RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 1158 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKELTQEATRFLMLIFKR 1216
            D WS GV+AY+LL G  PF  +++ +  + +    Y F+   + +++  A  F+  + ++
Sbjct: 200  DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 1217 APGKRPTVEECHENRWLVPSEYMIKKRERAV 1247
             P KR T E+  ++ W+     + K   ++V
Sbjct: 260  DPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----SL 226
           G  V+  T   +D Y     LG+G  G V    ++ +G+  A KV++ +  + K    SL
Sbjct: 38  GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 97
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI 286
            + E+ ++ QL H N+++L++ +E K  F ++ E+  GGEL   +  +  ++E D A  I
Sbjct: 98  LR-EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 156
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLLLTDFGLSRRITSFGKL 338
           RQ+LSG+ YMH+  I H  L P +LL+ +     ++ + DFGLS    +  K+
Sbjct: 157 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 209

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  VL G+ Y+H   + H +++P+N+++ S  +   +++ID G +        +   
Sbjct: 153  ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 212
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            I T    + APEVL       + DVWS GV+ Y+LLSG  PF G +E +  + V   +Y 
Sbjct: 213  IGTAY--YIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 269
Query: 1068 FEY-LFKELTQEATRFL--MLIFKHEVDWITLANNIDHEF 1104
            FE   +K++++ A   +  ML +   +  I+  + +DHE+
Sbjct: 270  FELPQWKKVSESAKDLIRKMLTYVPSM-RISARDALDHEW 308

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEVL       + DVWS GV+ Y+LLSG  PF G +E +  + V   +Y FE   +K++
Sbjct: 220  APEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 278
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            ++ A   +  +    P  R +  +  ++ W+
Sbjct: 279  SESAKDLIRKMLTYVPSMRISARDALDHEWI 309

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           LG+G  G V    +R + + YA KV+      N+  S    E++++ +L H N+++L + 
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
            E   SF I+ EL  GGEL   + ++  ++E+D A  I+Q+ SG+ YMH+ +I H  L P
Sbjct: 90  LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 309 GDLLV-AHPGGRHLLLTDFGLS 329
            ++L+ +      + + DFGLS
Sbjct: 150 ENILLESKEKDCDIKIIDFGLS 171

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 944  TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLG---CTQRVT 999
            + H  A  +  V  G+ Y+H   + H +++P+N+++ S  +   +K+ID G   C Q+ T
Sbjct: 119  SEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
            K+   I         + APEVL       + DVWSAGV+ Y+LLSG  PF G++E +  +
Sbjct: 179  KMKDRI-----GTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK 232
Query: 1060 NVNFVRYRFE 1069
             V   +Y F+
Sbjct: 233  RVETGKYAFD 242

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEVL       + DVWSAGV+ Y+LLSG  PF G++E +  + V   +Y F+   ++ +
Sbjct: 191  APEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + +A   +  +    P  R T  +C E+ W+
Sbjct: 250  SDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
           I   Y   + +GRG  G V  AV++ +    AAK +     +    FK E++IM  L H 
Sbjct: 7   INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 66
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           N++RL++++E      ++ EL  GGEL   +  +  + E D A  ++ +LS + Y H+L+
Sbjct: 67  NIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN 126
Query: 301 IAHLGLTPGD-LLVAHPGGRHLLLTDFGLSRRI 332
           +AH  L P + L +       L L DFGL+ R 
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVV-MASVRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  VL  + Y H   + H +++P+N + +       +KLID G   R  K G ++  
Sbjct: 109  ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-KPGKMMR- 166
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
                 P + +P+VL E    P+ D WSAGV+ YVLL G  PF   ++ E    +    + 
Sbjct: 167  TKVGTPYYVSPQVL-EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFT 225
Query: 1068 F-EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDL 1110
            F E  +  ++ +A   +  L+ K     IT    ++HE W  K L
Sbjct: 226  FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHE-WFEKQL 269

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
Query: 1108 KDLKRETNYTFRLSAKNV------IGWSEKGIPSALFKTKEQAPEVLAEEPI----FPQT 1157
            +DLK E N+ F   + +        G + +  P  + +TK   P  ++ + +     P+ 
Sbjct: 130  RDLKPE-NFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPEC 188
Query: 1158 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKR 1216
            D WSAGV+ YVLL G  PF   ++ E    +    + F E  +  ++ +A   +  +  +
Sbjct: 189  DEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTK 248
Query: 1217 APGKRPTVEECHENRWL 1233
            +P +R T  +  E+ W 
Sbjct: 249  SPKQRITSLQALEHEWF 265

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 84.7 bits (208), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNL 242
           Y+    LG+G  G V    +R + + YA KV+      N+  S    E++++ +L H N+
Sbjct: 24  YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
           ++L +  E   SF I+ EL  GGEL   + ++  ++E+D A  I+Q+ SG+ YMH+ +I 
Sbjct: 84  MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIV 143
Query: 303 HLGLTPGDLLV-AHPGGRHLLLTDFGLS 329
           H  L P ++L+ +      + + DFGLS
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLS 171

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 944  TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLG---CTQRVT 999
            + H  A  +  V  G+ Y+H   + H +++P+N+++ S  +   +K+ID G   C Q+ T
Sbjct: 119  SEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
            K+   I         + APEVL       + DVWSAGV+ Y+LLSG  PF G++E +  +
Sbjct: 179  KMKDRI-----GTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK 232
Query: 1060 NVNFVRYRFE 1069
             V   +Y F+
Sbjct: 233  RVETGKYAFD 242

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEVL       + DVWSAGV+ Y+LLSG  PF G++E +  + V   +Y F+   ++ +
Sbjct: 191  APEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + +A   +  +    P  R T  +C E+ W+
Sbjct: 250  SDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 84.7 bits (208), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNL 242
           Y+    LG+G  G V    +R + + YA KV+      N+  S    E++++ +L H N+
Sbjct: 24  YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
           ++L +  E   SF I+ EL  GGEL   + ++  ++E+D A  I+Q+ SG+ YMH+ +I 
Sbjct: 84  MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIV 143
Query: 303 HLGLTPGDLLV-AHPGGRHLLLTDFGLS 329
           H  L P ++L+ +      + + DFGLS
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLS 171

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 944  TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLG---CTQRVT 999
            + H  A  +  V  G+ Y+H   + H +++P+N+++ S  +   +K+ID G   C Q+ T
Sbjct: 119  SEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
            K+   I         + APEVL       + DVWSAGV+ Y+LLSG  PF G++E +  +
Sbjct: 179  KMKDRI-----GTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK 232
Query: 1060 NVNFVRYRFE 1069
             V   +Y F+
Sbjct: 233  RVETGKYAFD 242

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEVL       + DVWSAGV+ Y+LLSG  PF G++E +  + V   +Y F+   ++ +
Sbjct: 191  APEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + +A   +  +    P  R T  +C E+ W+
Sbjct: 250  SDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 84.7 bits (208), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
           I   Y   + +GRG  G V  AV++ +    AAK +     +    FK E++IM  L H 
Sbjct: 24  INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 83
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           N++RL++++E      ++ EL  GGEL   +  +  + E D A  ++ +LS + Y H+L+
Sbjct: 84  NIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN 143
Query: 301 IAHLGLTPGD-LLVAHPGGRHLLLTDFGLSRRI 332
           +AH  L P + L +       L L DFGL+ R 
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 176

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVV-MASVRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  VL  + Y H   + H +++P+N + +       +KLID G   R  K G ++  
Sbjct: 126  ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-KPGKMMR- 183
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
                 P + +P+VL E    P+ D WSAGV+ YVLL G  PF   ++ E    +    + 
Sbjct: 184  TKVGTPYYVSPQVL-EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFT 242
Query: 1068 F-EYLFKELTQEATRFL-MLIFKHEVDWITLANNIDHEFWHVKDL 1110
            F E  +  ++ +A   +  L+ K     IT    ++HE W  K L
Sbjct: 243  FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHE-WFEKQL 286

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
Query: 1108 KDLKRETNYTFRLSAKNV------IGWSEKGIPSALFKTKEQAPEVLAEEPI----FPQT 1157
            +DLK E N+ F   + +        G + +  P  + +TK   P  ++ + +     P+ 
Sbjct: 147  RDLKPE-NFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPEC 205
Query: 1158 DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKR 1216
            D WSAGV+ YVLL G  PF   ++ E    +    + F E  +  ++ +A   +  +  +
Sbjct: 206  DEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTK 265
Query: 1217 APGKRPTVEECHENRWL 1233
            +P +R T  +  E+ W 
Sbjct: 266  SPKQRITSLQALEHEWF 282

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 83.6 bits (205), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 89/164 (54%), Gaps = 6/164 (3%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----SL 226
           G  V+  T   +D Y     LG+G  G V    ++ +G+  A KV++ +  + K    SL
Sbjct: 14  GXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73
Query: 227 FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI 286
            + E+ ++ QL H N+ +L++ +E K  F ++ E+  GGEL   +  +  ++E D A  I
Sbjct: 74  LR-EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 132
Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLV-AHPGGRHLLLTDFGLS 329
           RQ+LSG+ Y H+  I H  L P +LL+ +     ++ + DFGLS
Sbjct: 133 RQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  VL G+ Y H   + H +++P+N+++ S  +   +++ID G +            
Sbjct: 129  ARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK 188
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            I T    + APEVL       + DVWS GV+ Y+LLSG  PF G +E +  + V   +Y 
Sbjct: 189  IGTAY--YIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 245
Query: 1068 FE 1069
            FE
Sbjct: 246  FE 247

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEVL       + DVWS GV+ Y+LLSG  PF G +E +  + V   +Y FE   +K++
Sbjct: 196  APEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 254
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            ++ A   +       P  R +  +  ++ W+
Sbjct: 255  SESAKDLIRKXLTYVPSXRISARDALDHEWI 285

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH---PINTP 1011
            +   L YLH +G+CH +I+P+N + ++ +S ++KL+D G ++   KL    +        
Sbjct: 177  IFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAG 236
Query: 1012 NPEFAAPEVL--AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
             P F APEVL    E   P+ D WSAGVL ++LL GA PF G ++ +T   V   +  FE
Sbjct: 237  TPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFE 296

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 1144 APEVL--AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1196
            APEVL    E   P+ D WSAGVL ++LL GA PF G ++ +T   V   +  FE
Sbjct: 242  APEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFE 296

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 77.4 bits (189), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 7/145 (4%)
Query: 191 LGRGVTGIVY--HAVER-SSGRNYAAKVMTGKGNQYKSLF--KNELDIMNQLCHRNLVRL 245
           LG+G  G V+    V R  SG  YA KV+     + +     K E DI+  + H  +V+L
Sbjct: 36  LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
           H +++T+    +I +   GG+L   L+++  +TE D+  Y+ +L  GLD++H L I +  
Sbjct: 96  HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRD 155
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSR 330
           L P ++L+   G  H+ LTDFGLS+
Sbjct: 156 LKPENILLDEEG--HIKLTDFGLSK 178

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GG+L   L+++  +TE D+  Y+ +L  GLD++H L I +  L P ++L+   G  H+ L
Sbjct: 114 GGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEG--HIKL 171
Query: 524 TDFGLSR 530
           TDFGLS+
Sbjct: 172 TDFGLSK 178

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
            GL +LH  G+ + +++P+N+++       +KL D G ++         +       E+ A
Sbjct: 142  GLDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKEAIDHEKKAYSF-CGTVEYMA 198
Query: 1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQ 1077
            PEV+  +      D WS GVL + +L+G+ PF+G+   ET   +   +         L+ 
Sbjct: 199  PEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQF---LST 255
Query: 1078 EATRFLMLIFK 1088
            EA   L  +FK
Sbjct: 256  EAQSLLRALFK 266

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APEV+  +      D WS GVL + +L+G+ PF+G+   ET   +   +         L+
Sbjct: 198  APEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQF---LS 254
Query: 1204 QEATRFLMLIFKRAPGKR 1221
             EA   L  +FKR P  R
Sbjct: 255  TEAQSLLRALFKRNPANR 272

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 76.6 bits (187), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSV-QVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  +L G+ YLH   + H +I+P+N+++ +  S+  +K++D G +   +K   L   
Sbjct: 149  ANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR 208
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            + T    + APEVL ++    + DVWS GV+ Y+LL G  PF GQ++ +  + V   +Y 
Sbjct: 209  LGTA--YYIAPEVL-KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYY 265
Query: 1068 FEYL-FKELTQEATRFLMLIFKHEVD------------WI-TLANNID 1101
            F++  +K ++ EA   + L+  ++ +            WI   ANNI+
Sbjct: 266  FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNIN 313

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL-FKEL 1202
            APEVL ++    + DVWS GV+ Y+LL G  PF GQ++ +  + V   +Y F++  +K +
Sbjct: 216  APEVL-KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNI 274
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLG 1250
            + EA   + L+      KR T EE   +RW+      I K ++    G
Sbjct: 275  SDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCG 322

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 76.6 bits (187), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKS---LFKNELDIMNQL 237
           ++D Y    +LG G  G V    ++ +G   A K++        S      +E+ ++ QL
Sbjct: 19  LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
            H N+++L++ +E K ++ ++ E+  GGEL   +  +  ++E D A  ++Q+LSG  Y+H
Sbjct: 79  DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLN 339
           + +I H  L P +LL+       L+ + DFGLS      GK+ 
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK 181

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  VL G  YLH   + H +++P+N+++ S  R   +K++D G +      G +   
Sbjct: 124  AVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER 183
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            + T    + APEVL ++    + DVWS GV+ Y+LL G  PF GQ++ E  + V   ++ 
Sbjct: 184  LGTAY--YIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFS 240
Query: 1068 FEYL-FKELTQEATRFLMLIFKHE 1090
            F+   + +++ EA + + L+  +E
Sbjct: 241  FDPPDWTQVSDEAKQLVKLMLTYE 264

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL-FKEL 1202
            APEVL ++    + DVWS GV+ Y+LL G  PF GQ++ E  + V   ++ F+   + ++
Sbjct: 191  APEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 249
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
            + EA + + L+    P KR + EE   + W+V
Sbjct: 250  SDEAKQLVKLMLTYEPSKRISAEEALNHPWIV 281

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRN----YAAKVMTGKGNQYKSLF--KNELDIMNQLCHRNLVR 244
           LG+G  G V+  V++ SG +    YA KV+     + +     K E DI+ ++ H  +V+
Sbjct: 32  LGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
           LH +++T+    +I +   GG+L   L+++  +TE D+  Y+ +L   LD++H L I + 
Sbjct: 91  LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYR 150
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P ++L+   G  H+ LTDFGLS+
Sbjct: 151 DLKPENILLDEEG--HIKLTDFGLSK 174

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GG+L   L+++  +TE D+  Y+ +L   LD++H L I +  L P ++L+   G  H+ L
Sbjct: 110 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKL 167
Query: 524 TDFGLSR 530
           TDFGLS+
Sbjct: 168 TDFGLSK 174

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 941  VIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK 1000
            V+ T     + +  +   L +LH  G+ + +++P+N+++       +KL D G ++    
Sbjct: 121  VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKESID 178
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
                 +       E+ APEV+         D WS GVL + +L+G  PF+G+   ET   
Sbjct: 179  HEKKAYSF-CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
Query: 1061 VNFVRYRFEYLFKELTQEATRFLMLIFK 1088
            +   +         L+ EA   L ++FK
Sbjct: 238  ILKAKLGMPQF---LSPEAQSLLRMLFK 262

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APEV+         D WS GVL + +L+G  PF+G+   ET   +   +         L+
Sbjct: 194  APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF---LS 250
Query: 1204 QEATRFLMLIFKRAPGKR 1221
             EA   L ++FKR P  R
Sbjct: 251  PEAQSLLRMLFKRNPANR 268

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKS---LFKNELDIMNQL 237
           ++D Y    +LG G  G V    ++ +G   A K++        S      +E+ ++ QL
Sbjct: 2   LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
            H N+++L++ +E K ++ ++ E+  GGEL   +  +  ++E D A  ++Q+LSG  Y+H
Sbjct: 62  DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLN 339
           + +I H  L P +LL+       L+ + DFGLS      GK+ 
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK 164

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  VL G  YLH   + H +++P+N+++ S  R   +K++D G +      G +   
Sbjct: 107  AVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER 166
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            + T    + APEVL  +    + DVWS GV+ Y+LL G  PF GQ++ E  + V   ++ 
Sbjct: 167  LGTAY--YIAPEVL-RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFS 223
Query: 1068 FE-YLFKELTQEATRFLMLIFKHE 1090
            F+   + +++ EA + + L+  +E
Sbjct: 224  FDPPDWTQVSDEAKQLVKLMLTYE 247

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKEL 1202
            APEVL  +    + DVWS GV+ Y+LL G  PF GQ++ E  + V   ++ F+   + ++
Sbjct: 174  APEVL-RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 232
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
            + EA + + L+    P KR + EE   + W+V
Sbjct: 233  SDEAKQLVKLMLTYEPSKRISAEEALNHPWIV 264

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 12/164 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGN-------QYKSLFKNELDIMN 235
           Y+  + LGRGV+ +V   + + + + YA K++  TG G+       + +     E+DI+ 
Sbjct: 6   YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 236 QLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
           ++  H N+++L D+YET   F ++ +L   GEL   LT +   +E +    +R LL  + 
Sbjct: 66  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 125
Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
            +H+L+I H  L P ++L+      ++ LTDFG S ++    KL
Sbjct: 126 ALHKLNIVHRDLKPENILLDD--DMNIKLTDFGFSCQLDPGEKL 167

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
            ++L+ +  LH   + H +++P+N+++     + +KL D G + ++     L     TP+ 
Sbjct: 119  ALLEVICALHKLNIVHRDLKPENILLDD--DMNIKLTDFGFSCQLDPGEKLREVCGTPS- 175
Query: 1014 EFAAPEVLA-----EEPIF-PQTDVWSAGVLAYVLLSGASPF 1049
             + APE++        P +  + D+WS GV+ Y LL+G+ PF
Sbjct: 176  -YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRN----YAAKVMTGKGNQYKSLF--KNELDIMNQLCHRNLVR 244
           LG+G  G V+  V++ SG +    YA KV+     + +     K E DI+ ++ H  +V+
Sbjct: 32  LGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
           LH +++T+    +I +   GG+L   L+++  +TE D+  Y+ +L   LD++H L I + 
Sbjct: 91  LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYR 150
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P ++L+   G  H+ LTDFGLS+
Sbjct: 151 DLKPENILLDEEG--HIKLTDFGLSK 174

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GG+L   L+++  +TE D+  Y+ +L   LD++H L I +  L P ++L+   G  H+ L
Sbjct: 110 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKL 167
Query: 524 TDFGLSR 530
           TDFGLS+
Sbjct: 168 TDFGLSK 174

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 941  VIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK 1000
            V+ T     + +  +   L +LH  G+ + +++P+N+++       +KL D G ++    
Sbjct: 121  VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKESID 178
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
                 +       E+ APEV+         D WS GVL + +L+G  PF+G+   ET   
Sbjct: 179  HEKKAYSF-CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
Query: 1061 VNFVRYRFEYLFKELTQEATRFLMLIFK 1088
            +   +         L+ EA   L ++FK
Sbjct: 238  ILKAKLGMPQF---LSPEAQSLLRMLFK 262

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
             APEV+         D WS GVL + +L+G  PF+G+   ET   +   +         L
Sbjct: 193  MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF---L 249
Query: 1203 TQEATRFLMLIFKRAPGKR 1221
            + EA   L ++FKR P  R
Sbjct: 250  SPEAQSLLRMLFKRNPANR 268

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRN----YAAKVMTGKGNQYKSLF--KNELDIMNQLCHRNLVR 244
           LG+G  G V+  V++ SG +    YA KV+     + +     K E DI+ ++ H  +V+
Sbjct: 33  LGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 91
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
           LH +++T+    +I +   GG+L   L+++  +TE D+  Y+ +L   LD++H L I + 
Sbjct: 92  LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYR 151
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P ++L+   G  H+ LTDFGLS+
Sbjct: 152 DLKPENILLDEEG--HIKLTDFGLSK 175

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GG+L   L+++  +TE D+  Y+ +L   LD++H L I +  L P ++L+   G  H+ L
Sbjct: 111 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKL 168
Query: 524 TDFGLSR 530
           TDFGLS+
Sbjct: 169 TDFGLSK 175

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 941  VIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK 1000
            V+ T     + +  +   L +LH  G+ + +++P+N+++       +KL D G ++    
Sbjct: 122  VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKESID 179
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
                 +       E+ APEV+         D WS GVL + +L+G  PF+G+   ET   
Sbjct: 180  HEKKAYSF-CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 238
Query: 1061 VNFVRYRFEYLFKELTQEATRFLMLIFK 1088
            +   +         L+ EA   L ++FK
Sbjct: 239  ILKAKLGMPQF---LSPEAQSLLRMLFK 263

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
             APEV+         D WS GVL + +L+G  PF+G+   ET   +   +         L
Sbjct: 194  MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF---L 250
Query: 1203 TQEATRFLMLIFKRAPGKR 1221
            + EA   L ++FKR P  R
Sbjct: 251  SPEAQSLLRMLFKRNPANR 269

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 12/164 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGN-------QYKSLFKNELDIMN 235
           Y+  + LGRGV+ +V   + + + + YA K++  TG G+       + +     E+DI+ 
Sbjct: 19  YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 236 QLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
           ++  H N+++L D+YET   F ++ +L   GEL   LT +   +E +    +R LL  + 
Sbjct: 79  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
            +H+L+I H  L P ++L+      ++ LTDFG S ++    KL
Sbjct: 139 ALHKLNIVHRDLKPENILLD--DDMNIKLTDFGFSCQLDPGEKL 180

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
            ++L+ +  LH   + H +++P+N+++     + +KL D G + ++     L     TP+ 
Sbjct: 132  ALLEVICALHKLNIVHRDLKPENILLDD--DMNIKLTDFGFSCQLDPGEKLREVCGTPS- 188
Query: 1014 EFAAPEVLA-----EEPIF-PQTDVWSAGVLAYVLLSGASPF 1049
             + APE++        P +  + D+WS GV+ Y LL+G+ PF
Sbjct: 189  -YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 12/164 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGN-------QYKSLFKNELDIMN 235
           Y+  + LGRGV+ +V   + + + + YA K++  TG G+       + +     E+DI+ 
Sbjct: 19  YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 236 QLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
           ++  H N+++L D+YET   F ++ +L   GEL   LT +   +E +    +R LL  + 
Sbjct: 79  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
            +H+L+I H  L P ++L+      ++ LTDFG S ++    KL
Sbjct: 139 ALHKLNIVHRDLKPENILLD--DDMNIKLTDFGFSCQLDPGEKL 180

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
            ++L+ +  LH   + H +++P+N+++     + +KL D G + ++     L     TP+ 
Sbjct: 132  ALLEVICALHKLNIVHRDLKPENILLDD--DMNIKLTDFGFSCQLDPGEKLRSVCGTPS- 188
Query: 1014 EFAAPEVLA-----EEPIF-PQTDVWSAGVLAYVLLSGASPF 1049
             + APE++        P +  + D+WS GV+ Y LL+G+ PF
Sbjct: 189  -YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 74.3 bits (181), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           ++G G TGIV  A  RSSG+  A K M  +  Q + L  NE+ IM    H N+V +++SY
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
              D   ++ E   GG L   +T  +   E  IA     +L  L  +H   + H  +   
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 276
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
            +L+ H G   + L+DFG   +++
Sbjct: 277 SILLTHDG--RVKLSDFGFCAQVS 298

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHP 1007
            A C+ +VL  L  LH +G+ H +I+ D++++      +VKL D G C Q   ++      
Sbjct: 251  AVCL-AVLQALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKEVPRRKXL 307
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            + TP   + APE+++  P  P+ D+WS G++   ++ G  P+
Sbjct: 308  VGTPY--WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 73.6 bits (179), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           ++G G TGIV  A  RSSG+  A K M  +  Q + L  NE+ IM    H N+V +++SY
Sbjct: 36  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
              D   ++ E   GG L   +T  +   E  IA     +L  L  +H   + H  +   
Sbjct: 96  LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 154
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
            +L+ H G   + L+DFG   +++
Sbjct: 155 SILLTHDG--RVKLSDFGFCAQVS 176

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 20/109 (18%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK-------- 1000
            A C+ +VL  L  LH +G+ H +I+ D++++      +VKL D G   +V+K        
Sbjct: 129  AVCL-AVLQALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKEVPRRKXL 185
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            +GT         P + APE+++  P  P+ D+WS G++   ++ G  P+
Sbjct: 186  VGT---------PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 225

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 73.6 bits (179), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           ++G G TGIV  A  RSSG+  A K M  +  Q + L  NE+ IM    H N+V +++SY
Sbjct: 38  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
              D   ++ E   GG L   +T  +   E  IA     +L  L  +H   + H  +   
Sbjct: 98  LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 156
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
            +L+ H G   + L+DFG   +++
Sbjct: 157 SILLTHDG--RVKLSDFGFCAQVS 178

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 20/109 (18%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK-------- 1000
            A C+ +VL  L  LH +G+ H +I+ D++++      +VKL D G   +V+K        
Sbjct: 131  AVCL-AVLQALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKEVPRRKXL 187
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            +GT         P + APE+++  P  P+ D+WS G++   ++ G  P+
Sbjct: 188  VGT---------PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 227

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 73.6 bits (179), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
            +L+ L+Y H   + H +++P+NV++AS   S  VKL D G   ++ + G L+       P
Sbjct: 139  ILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG-LVAGGRVGTP 197
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
             F APEV+  EP     DVW  GV+ ++LLSG  PF G  E
Sbjct: 198  HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY---LF 1199
             APEV+  EP     DVW  GV+ ++LLSG  PF G  E   R     ++ +++     +
Sbjct: 200  MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RLFEGIIKGKYKMNPRQW 256
Query: 1200 KELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
              +++ A   +  +    P +R TV E   + WL
Sbjct: 257  SHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 73.2 bits (178), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           ++G G TGIV  A  RSSG+  A K M  +  Q + L  NE+ IM    H N+V +++SY
Sbjct: 27  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
              D   ++ E   GG L   +T  +   E  IA     +L  L  +H   + H  +   
Sbjct: 87  LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 145
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
            +L+ H G   + L+DFG   +++
Sbjct: 146 SILLTHDG--RVKLSDFGFCAQVS 167

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 20/109 (18%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK-------- 1000
            A C+ +VL  L  LH +G+ H +I+ D++++      +VKL D G   +V+K        
Sbjct: 120  AVCL-AVLQALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKEVPRRKXL 176
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            +GT         P + APE+++  P  P+ D+WS G++   ++ G  P+
Sbjct: 177  VGT---------PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFK 228
           G  + ++   +++ Y    +LG G  G V    ++ +    A K++  T       S   
Sbjct: 25  GMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL 84
Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
            E+ ++  L H N+++L+D +E K ++ ++ E   GGEL   +  +  + E D A  I+Q
Sbjct: 85  EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQ 144
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLS 329
           +LSG+ Y+H+ +I H  L P +LL+       L+ + DFGLS
Sbjct: 145 VLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  VL G+ YLH   + H +++P+N+++ S  +   +K++D G +        +   
Sbjct: 139  AVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER 198
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            + T    + APEVL  +    + DVWS GV+ ++LL+G  PF GQ++ E  + V   +Y 
Sbjct: 199  LGTAY--YIAPEVL-RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT 255
Query: 1068 FE 1069
            F+
Sbjct: 256  FD 257

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEVL  +    + DVWS GV+ ++LL+G  PF GQ++ E  + V   +Y F+   +K +
Sbjct: 206  APEVL-RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNV 264
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFL 1249
            ++ A   +  + +    +R + ++  E+ W+   + M  K+E  + L
Sbjct: 265  SEGAKDLIKQMLQFDSQRRISAQQALEHPWI---KEMCSKKESGIEL 308

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 72.8 bits (177), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           ++G G TGIV  A  RSSG+  A K M  +  Q + L  NE+ IM    H N+V +++SY
Sbjct: 31  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
              D   ++ E   GG L   +T  +   E  IA     +L  L  +H   + H  +   
Sbjct: 91  LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 149
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
            +L+ H G   + L+DFG   +++
Sbjct: 150 SILLTHDG--RVKLSDFGFCAQVS 171

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 20/109 (18%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK-------- 1000
            A C+ +VL  L  LH +G+ H +I+ D++++      +VKL D G   +V+K        
Sbjct: 124  AVCL-AVLQALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKEVPRRKXL 180
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            +GT         P + APE+++  P  P+ D+WS G++   ++ G  P+
Sbjct: 181  VGT---------PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 220

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 72.8 bits (177), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +++G+G +G VY A++ ++G+  A + M  +    K L  NE+ +M +  + N+V   DS
Sbjct: 27  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
           Y   D   ++ E   GG L   +T ++   E  IA   R+ L  L+++H   + H  +  
Sbjct: 87  YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKS 145
Query: 309 GDLLVAHPGGRHLLLTDFGLSRRIT 333
            ++L+   G   + LTDFG   +IT
Sbjct: 146 DNILLGMDGS--VKLTDFGFCAQIT 168

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 19/109 (17%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
            A      L  L++LH   + H NI+ DN+++    SV  KL D G C Q       R T 
Sbjct: 120  AAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSV--KLTDFGFCAQITPEQSKRSTM 177
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            +GT         P + APEV+  +   P+ D+WS G++A  ++ G  P+
Sbjct: 178  VGT---------PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 72.8 bits (177), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           ++G G TGIV  A  RSSG+  A K M  +  Q + L  NE+ IM    H N+V +++SY
Sbjct: 81  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
              D   ++ E   GG L   +T  +   E  IA     +L  L  +H   + H  +   
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 199
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
            +L+ H G   + L+DFG   +++
Sbjct: 200 SILLTHDG--RVKLSDFGFCAQVS 221

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHP 1007
            A C+ +VL  L  LH +G+ H +I+ D++++      +VKL D G C Q   ++      
Sbjct: 174  AVCL-AVLQALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKEVPRRKXL 230
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            + TP   + APE+++  P  P+ D+WS G++   ++ G  P+
Sbjct: 231  VGTPY--WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +++G+G +G VY A++ ++G+  A + M  +    K L  NE+ +M +  + N+V   DS
Sbjct: 27  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
           Y   D   ++ E   GG L   +T ++   E  IA   R+ L  L+++H   + H  +  
Sbjct: 87  YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 145
Query: 309 GDLLVAHPGGRHLLLTDFGLSRRIT 333
            ++L+   G   + LTDFG   +IT
Sbjct: 146 DNILLGMDGS--VKLTDFGFCAQIT 168

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHP 1007
            A      L  L++LH   + H +I+ DN+++    SV  KL D G C Q   +       
Sbjct: 120  AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSV--KLTDFGFCAQITPEQSKRSXM 177
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            + TP   + APEV+  +   P+ D+WS G++A  ++ G  P+
Sbjct: 178  VGTPY--WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 178 TKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--------QYKSLFKN 229
            K     YD  D +GRGV+ +V   V R++G  +A K+M             + +   + 
Sbjct: 89  AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRR 148
Query: 230 ELDIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
           E  I+ Q+  H +++ L DSYE+     ++ +L   GEL   LT +   +E +    +R 
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRS 208
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL 341
           LL  + ++H  +I H  L P ++L+       + L+DFG S  +    KL  L
Sbjct: 209 LLEAVSFLHANNIVHRDLKPENILLD--DNMQIRLSDFGFSCHLEPGEKLREL 259

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 64/120 (53%), Gaps = 11/120 (9%)
Query: 937  YLPIVIPTTHKDAYCVT-SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT 995
            YL   +  + K+   +  S+L+ + +LH   + H +++P+N+++    ++Q++L D G +
Sbjct: 190  YLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD--NMQIRLSDFGFS 247
Query: 996  QRVTKLGTLIHPINTPNPEFAAPEVL--AEEPIFP----QTDVWSAGVLAYVLLSGASPF 1049
              +     L     TP   + APE+L  + +   P    + D+W+ GV+ + LL+G+ PF
Sbjct: 248  CHLEPGEKLRELCGTPG--YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +++G+G +G VY A++ ++G+  A + M  +    K L  NE+ +M +  + N+V   DS
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
           Y   D   ++ E   GG L   +T ++   E  IA   R+ L  L+++H   + H  +  
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 309 GDLLVAHPGGRHLLLTDFGLSRRIT 333
            ++L+   G   + LTDFG   +IT
Sbjct: 145 DNILLGMDGS--VKLTDFGFCAQIT 167

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHP 1007
            A      L  L++LH   + H +I+ DN+++    SV  KL D G C Q   +       
Sbjct: 119  AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSV--KLTDFGFCAQITPEQSKRSEM 176
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            + TP   + APEV+  +   P+ D+WS G++A  ++ G  P+
Sbjct: 177  VGTPY--WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +++G+G +G VY A++ ++G+  A + M  +    K L  NE+ +M +  + N+V   DS
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
           Y   D   ++ E   GG L   +T ++   E  IA   R+ L  L+++H   + H  +  
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 309 GDLLVAHPGGRHLLLTDFGLSRRIT 333
            ++L+   G   + LTDFG   +IT
Sbjct: 145 DNILLGMDGS--VKLTDFGFCAQIT 167

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHP 1007
            A      L  L++LH   + H +I+ DN+++    SV  KL D G C Q   +       
Sbjct: 119  AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSV--KLTDFGFCAQITPEQSKRSXM 176
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            + TP   + APEV+  +   P+ D+WS G++A  ++ G  P+
Sbjct: 177  VGTPY--WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +++G+G +G VY A++ ++G+  A + M  +    K L  NE+ +M +  + N+V   DS
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
           Y   D   ++ E   GG L   +T ++   E  IA   R+ L  L+++H   + H  +  
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 309 GDLLVAHPGGRHLLLTDFGLSRRIT 333
            ++L+   G   + LTDFG   +IT
Sbjct: 145 DNILLGMDGS--VKLTDFGFCAQIT 167

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 19/109 (17%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
            A      L  L++LH   + H +I+ DN+++    SV  KL D G C Q       R T 
Sbjct: 119  AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSV--KLTDFGFCAQITPEQSKRSTM 176
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            +GT         P + APEV+  +   P+ D+WS G++A  ++ G  P+
Sbjct: 177  VGT---------PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 72.0 bits (175), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQLCHR 240
           + F   +G+G  G V  A  ++    YA KV+  K      + K +      ++  + H 
Sbjct: 40  FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            LV LH S++T D    + +   GGEL + L R+  + E     Y  ++ S L Y+H L+
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           I +  L P ++L+   G  H++LTDFGL +
Sbjct: 160 IVYRDLKPENILLDSQG--HIVLTDFGLCK 187

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPI 1008
            +    +   L YLH   + + +++P+N+++ S     + L D G C + +    T     
Sbjct: 143  FYAAEIASALGYLHSLNIVYRDLKPENILLDS--QGHIVLTDFGLCKENIEHNSTTSTFC 200
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
             TP  E+ APEVL ++P     D W  G + Y +L G  PF  ++  E   N+
Sbjct: 201  GTP--EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI 251

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 72.0 bits (175), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           ++G G TGIV  A E+ SGR  A K+M  +  Q + L  NE+ IM    H N+V ++ SY
Sbjct: 52  KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
              +   ++ E   GG  L  +  Q    E  IA     +L  L Y+H   + H  +   
Sbjct: 112 LVGEELWVLMEFLQGGA-LTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSD 170
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
            +L+   G   + L+DFG   +I+
Sbjct: 171 SILLTLDG--RVKLSDFGFCAQIS 192

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Query: 914  KCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIE 973
            K   VGE   V+  F  G +    +  V     + A    +VL  L YLH +G+ H +I+
Sbjct: 109  KSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
Query: 974  PDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDV 1032
             D++++      +VKL D G C Q    +      + TP   + APEV++      + D+
Sbjct: 169  SDSILLT--LDGRVKLSDFGFCAQISKDVPKRKXLVGTPY--WMAPEVISRSLYATEVDI 224
Query: 1033 WSAGVLAYVLLSGASPFRGQS 1053
            WS G++   ++ G  P+   S
Sbjct: 225  WSLGIMVIEMVDGEPPYFSDS 245

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 70.1 bits (170), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 176 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMN 235
           TR     D ++   ELG G  G VY A  + +    AAKV+  K  +    +  E+DI+ 
Sbjct: 30  TRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGEL-LHSLTRQSYYTEYDIAHYIRQLLSGLD 294
              H N+V+L D++  +++  I+ E   GG +    L  +   TE  I    +Q L  L+
Sbjct: 90  SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           Y+H   I H  L  G++L    G   + L DFG+S + T
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGD--IKLADFGVSAKNT 186

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 70.1 bits (170), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 176 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELD 232
            R K   + +D+   LG+G  G V    E+++GR YA K++  +    K    +   E  
Sbjct: 1   ARAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 233 IMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSG 292
           ++    H  L  L  +++T D    + E A GGEL   L+R+  +TE     Y  +++S 
Sbjct: 61  VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA 120
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           L+Y+H   + +  +   +L++   G  H+ +TDFGL +   S G
Sbjct: 121 LEYLHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDG 162

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
            ++  L+YLH R + + +I+ +N+++   +   +K+ D G C + ++   T+     TP  
Sbjct: 117  IVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKTFCGTP-- 172
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
            E+ APEVL +       D W  GV+ Y ++ G  PF  Q      + +     RF    +
Sbjct: 173  EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---R 229
Query: 1074 ELTQEATRFLMLIFKHE 1090
             L+ EA   L  + K +
Sbjct: 230  TLSPEAKSLLAGLLKKD 246

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 70.1 bits (170), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
           D ++   ELG G  G VY A  + +    AAKV+  K  +    +  E+DI+    H N+
Sbjct: 37  DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 243 VRLHDSYETKDSFTIISELAGGGEL-LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           V+L D++  +++  I+ E   GG +    L  +   TE  I    +Q L  L+Y+H   I
Sbjct: 97  VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
            H  L  G++L    G   + L DFG+S + T
Sbjct: 157 IHRDLKAGNILFTLDGD--IKLADFGVSAKNT 186

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 70.1 bits (170), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 176 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMN 235
           TR     D ++   ELG G  G VY A  + +    AAKV+  K  +    +  E+DI+ 
Sbjct: 30  TRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGEL-LHSLTRQSYYTEYDIAHYIRQLLSGLD 294
              H N+V+L D++  +++  I+ E   GG +    L  +   TE  I    +Q L  L+
Sbjct: 90  SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           Y+H   I H  L  G++L    G   + L DFG+S + T
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGD--IKLADFGVSAKNT 186

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSY 249
           ++G G TGIV  A E+ +G+  A K M  +  Q + L  NE+ IM    H N+V ++ SY
Sbjct: 52  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
              D   ++ E   GG L   +T  +   E  IA     +L  L Y+H   + H  +   
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSD 170
Query: 310 DLLVAHPGGRHLLLTDFGLSRRIT 333
            +L+   G   + L+DFG   +++
Sbjct: 171 SILLTSDG--RIKLSDFGFCAQVS 192

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHP 1007
            A    SVL  L YLH +G+ H +I+ D++++ S    ++KL D G C Q   ++      
Sbjct: 144  ATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS--DGRIKLSDFGFCAQVSKEVPKRKXL 201
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            + TP   + APEV++  P   + D+WS G++   ++ G  P+
Sbjct: 202  VGTPY--WMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDI 233
           + K   D +D G  LG+G  G VY A E+ +    A KV+     + + +    + E++I
Sbjct: 9   KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 68
Query: 234 MNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
            + L H N++R+++ +  +    ++ E A  GEL   L +   + E   A ++ +L   L
Sbjct: 69  QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 128
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            Y H   + H  + P +LL+ + G   L + DFG S
Sbjct: 129 HYCHERKVIHRDIKPENLLMGYKG--ELKIADFGWS 162

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 947  KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT------QRVTK 1000
            + A  +  + D L Y H R + H +I+P+N++M      ++K+ D G +      +R   
Sbjct: 116  RSATFMEELADALHYCHERKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXM 173
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
             GTL         ++  PE++  +    + D+W AGVL Y  L G  PF   S  ET + 
Sbjct: 174  CGTL---------DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR 224
Query: 1061 VNFVRYRF 1068
            +  V  +F
Sbjct: 225  IVNVDLKF 232

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 6/134 (4%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++  +QY H + + H +++ +N+++ +   + +K+ D G +   T  G L       +P
Sbjct: 119  QIVSAVQYCHQKRIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTVGGKL--DTFCGSP 174
Query: 1014 EFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YL 1071
             +AAPE+   ++   P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR   Y+
Sbjct: 175  PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 234
Query: 1072 FKELTQEATRFLML 1085
              +      RFL+L
Sbjct: 235  STDCENLLKRFLVL 248

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
            P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR   Y+  +      RFL+L 
Sbjct: 190  PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVL- 248
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
                P KR T+E+  ++RW+
Sbjct: 249  ---NPIKRGTLEQIMKDRWI 265

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMN 235
           K   + +D+   LG+G  G V    E+++GR YA K++  +    K    +   E  ++ 
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
              H  L  L  +++T D    + E A GGEL   L+R+  +TE     Y  +++S L+Y
Sbjct: 61  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           +H   + +  +   +L++   G  H+ +TDFGL +   S G
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDG 159

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 953  TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTP 1011
              ++  L+YLH R + + +I+ +N+++   +   +K+ D G C + ++   T+     TP
Sbjct: 112  AEIVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL 1071
              E+ APEVL +       D W  GV+ Y ++ G  PF  Q      + +     RF   
Sbjct: 170  --EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-- 225
Query: 1072 FKELTQEATRFLMLIFKHE 1090
             + L+ EA   L  + K +
Sbjct: 226  -RTLSPEAKSLLAGLLKKD 243

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
            + S+ + +QYLH   + H +++P+N++  S R +  +KL D G  +  T   +L  P  T
Sbjct: 121  MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYT 180
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            P   + APEVL  E      D+WS GV+ Y+LL G  PF
Sbjct: 181  PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRFEY-L 1198
            APEVL  E      D+WS GV+ Y+LL G  PF         P  +  +   +Y F    
Sbjct: 185  APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 244
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
            + E+++E    +  + K  P +R T+ E   + W++ S    K  +  +     LKE  +
Sbjct: 245  WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 301
Query: 1259 EYHDLKNKQFTS 1270
             + D+K +  ++
Sbjct: 302  RWEDVKEEMTSA 313

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMN 235
           K   + +D+   LG+G  G V    E+++GR YA K++  +    K    +   E  ++ 
Sbjct: 6   KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
              H  L  L  +++T D    + E A GGEL   L+R+  +TE     Y  +++S L+Y
Sbjct: 66  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 125
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           +H   + +  +   +L++   G  H+ +TDFGL +   S G
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDG 164

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 953  TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTP 1011
              ++  L+YLH R + + +I+ +N+++   +   +K+ D G C + ++   T+     TP
Sbjct: 117  AEIVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKXFCGTP 174
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL 1071
              E+ APEVL +       D W  GV+ Y ++ G  PF  Q      + +     RF   
Sbjct: 175  --EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-- 230
Query: 1072 FKELTQEATRFLMLIFKHE 1090
             + L+ EA   L  + K +
Sbjct: 231  -RTLSPEAKSLLAGLLKKD 248

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMN 235
           K   + +D+   LG+G  G V    E+++GR YA K++  +    K    +   E  ++ 
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
              H  L  L  +++T D    + E A GGEL   L+R+  +TE     Y  +++S L+Y
Sbjct: 61  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           +H   + +  +   +L++   G  H+ +TDFGL +   S G
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDG 159

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
            ++  L+YLH R + + +I+ +N+++   +   +K+ D G C + ++   T+     TP  
Sbjct: 114  IVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKXFCGTP-- 169
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
            E+ APEVL +       D W  GV+ Y ++ G  PF  Q      + +     RF    +
Sbjct: 170  EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---R 226
Query: 1074 ELTQEATRFLMLIFKHE 1090
             L+ EA   L  + K +
Sbjct: 227  TLSPEAKSLLAGLLKKD 243

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMN 235
           K   + +D+   LG+G  G V    E+++GR YA K++  +    K    +   E  ++ 
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
              H  L  L  +++T D    + E A GGEL   L+R+  +TE     Y  +++S L+Y
Sbjct: 61  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           +H   + +  +   +L++   G  H+ +TDFGL +   S G
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDG 159

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
            ++  L+YLH R + + +I+ +N+++   +   +K+ D G C + ++   T+     TP  
Sbjct: 114  IVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKTFCGTP-- 169
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
            E+ APEVL +       D W  GV+ Y ++ G  PF  Q      + +     RF    +
Sbjct: 170  EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---R 226
Query: 1074 ELTQEATRFLMLIFKHE 1090
             L+ EA   L  + K +
Sbjct: 227  TLSPEAKSLLAGLLKKD 243

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMN 235
           K   + +D+   LG+G  G V    E+++GR YA K++  +    K    +   E  ++ 
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
              H  L  L  +++T D    + E A GGEL   L+R+  +TE     Y  +++S L+Y
Sbjct: 61  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           +H   + +  +   +L++   G  H+ +TDFGL +   S G
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDG 159

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 953  TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTP 1011
              ++  L+YLH R + + +I+ +N+++   +   +K+ D G C + ++   T+     TP
Sbjct: 112  AEIVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL 1071
              E+ APEVL +       D W  GV+ Y ++ G  PF  Q      + +     RF   
Sbjct: 170  --EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP-- 225
Query: 1072 FKELTQEATRFLMLIFKHE 1090
             + L+ EA   L  + K +
Sbjct: 226  -RTLSPEAKSLLAGLLKKD 243

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
            + S+ + +QYLH   + H +++P+N++  S R +  +KL D G  +  T   +L  P  T
Sbjct: 123  MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 182
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            P   + APEVL  E      D+WS GV+ Y+LL G  PF
Sbjct: 183  PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
            APEVL  E      D+WS GV+ Y+LL G  PF         P  +  +   +Y F    
Sbjct: 187  APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 246
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
            + E+++E    +  + K  P +R T+ E   + W++ S    K  +  +     LKE  +
Sbjct: 247  WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 303
Query: 1259 EYHDLKNKQFTS 1270
             + D+K +  ++
Sbjct: 304  RWEDVKEEMTSA 315

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMN 235
           K   + +D+   LG+G  G V    E+++GR YA K++  +    K    +   E  ++ 
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
              H  L  L  +++T D    + E A GGEL   L+R+  +TE     Y  +++S L+Y
Sbjct: 61  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           +H   + +  +   +L++   G  H+ +TDFGL +   S G
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDG 159

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNP 1013
            ++  L+YLH R + + +I+ +N+++   +   +K+ D G C + ++   T+     TP  
Sbjct: 114  IVSALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEGISDGATMKTFCGTP-- 169
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
            E+ APEVL +       D W  GV+ Y ++ G  PF  Q      + +     RF    +
Sbjct: 170  EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---R 226
Query: 1074 ELTQEATRFLMLIFKHE 1090
             L+ EA   L  + K +
Sbjct: 227  TLSPEAKSLLAGLLKKD 243

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
            + S+ + +QYLH   + H +++P+N++  S R +  +KL D G  +  T   +L  P  T
Sbjct: 167  MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 226
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            P   + APEVL  E      D+WS GV+ Y+LL G  PF
Sbjct: 227  PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
            APEVL  E      D+WS GV+ Y+LL G  PF         P  +  +   +Y F    
Sbjct: 231  APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 290
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
            + E+++E    +  + K  P +R T+ E   + W++ S    K  +  +     LKE  +
Sbjct: 291  WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 347
Query: 1259 EYHDLKNKQFTS 1270
             + D+K +  ++
Sbjct: 348  RWEDVKEEMTSA 359

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQLC 238
           D ++    +G+G  G V    +  + + YA K M  +     N+ +++FK EL IM  L 
Sbjct: 15  DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK-ELQIMQGLE 73
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H  LV L  S++ ++   ++ +L  GG+L + L +  ++ E  +  +I +L+  LDY+  
Sbjct: 74  HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQN 133
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
             I H  + P ++L+   G  H+ +TDF ++
Sbjct: 134 QRIIHRDMKPDNILLDEHG--HVHITDFNIA 162

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
            + S+ + +QYLH   + H +++P+N++  S R +  +KL D G  +  T   +L  P  T
Sbjct: 173  MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 232
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            P   + APEVL  E      D+WS GV+ Y+LL G  PF
Sbjct: 233  PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
            APEVL  E      D+WS GV+ Y+LL G  PF         P  +  +   +Y F    
Sbjct: 237  APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 296
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
            + E+++E    +  + K  P +R T+ E   + W++ S    K  +  +     LKE  +
Sbjct: 297  WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 353
Query: 1259 EYHDLKNKQFTS 1270
             + D+K +  ++
Sbjct: 354  RWEDVKEEMTSA 365

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
           K R   + D ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E+
Sbjct: 6   KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
           +I + L H N++RL+  +       +I E A  GE+   L + S + E   A YI +L +
Sbjct: 65  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELAN 124
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            L Y H   + H  + P +LL+   G   L + DFG       SRR T  G L+ L
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 178

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R T
Sbjct: 113  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 170
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 171  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
             ++    R E+ F +   E  R L+  + KH
Sbjct: 222  RIS----RVEFTFPDFVTEGARDLISRLLKH 248

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 191  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 246
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 247  KHNPSQRPMLREVLEHPWI 265

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++  +QY H + + H +++ +N+++ +   + +K+ D G +   T  G L        P
Sbjct: 122  QIVSAVQYCHQKRIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTVGGKL--DAFCGAP 177
Query: 1014 EFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YL 1071
             +AAPE+   ++   P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR   Y+
Sbjct: 178  PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 237
Query: 1072 FKELTQEATRFLML 1085
              +      RFL+L
Sbjct: 238  STDCENLLKRFLVL 251

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
            P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR   Y+  +      RFL+L 
Sbjct: 193  PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVL- 251
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
                P KR T+E+  ++RW+
Sbjct: 252  ---NPIKRGTLEQIMKDRWI 268

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
            + S+ + +QYLH   + H +++P+N++  S R +  +KL D G  +  T   +L  P  T
Sbjct: 123  MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 182
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            P   + APEVL  E      D+WS GV+ Y+LL G  PF
Sbjct: 183  PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
            APEVL  E      D+WS GV+ Y+LL G  PF         P  +  +   +Y F    
Sbjct: 187  APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 246
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
            + E+++E    +  + K  P +R T+ E   + W++ S    K  +  +     LKE  +
Sbjct: 247  WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 303
Query: 1259 EYHDLKNKQFTS 1270
             + D+K +  ++
Sbjct: 304  RWEDVKEEMTSA 315

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
            + S+ + +QYLH   + H +++P+N++  S R +  +KL D G  +  T   +L  P  T
Sbjct: 129  MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 188
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            P   + APEVL  E      D+WS GV+ Y+LL G  PF
Sbjct: 189  PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
            APEVL  E      D+WS GV+ Y+LL G  PF         P  +  +   +Y F    
Sbjct: 193  APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 252
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
            + E+++E    +  + K  P +R T+ E   + W++ S    K  +  +     LKE  +
Sbjct: 253  WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 309
Query: 1259 EYHDLKNK 1266
             + D+K +
Sbjct: 310  RWEDVKEE 317

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
            + S+ + +QYLH   + H +++P+N++  S R +  +KL D G  +  T   +L  P  T
Sbjct: 122  MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 181
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            P   + APEVL  E      D+WS GV+ Y+LL G  PF
Sbjct: 182  PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
            APEVL  E      D+WS GV+ Y+LL G  PF         P  +  +   +Y F    
Sbjct: 186  APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 245
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
            + E+++E    +  + K  P +R T+ E   + W++ S    K  +  +     LKE  +
Sbjct: 246  WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 302
Query: 1259 EYHDLKNKQFTS 1270
             + D+K +  ++
Sbjct: 303  RWEDVKEEMTSA 314

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
            + S+ + +QYLH   + H +++P+N++  S R +  +KL D G  +  T   +L  P  T
Sbjct: 121  MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 180
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRY 1066
            P   + APEVL  E      D+WS GV+ Y+LL G  PF         P  +  +   +Y
Sbjct: 181  PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 238
Query: 1067 RF-EYLFKELTQEATRFLMLIFKHE 1090
             F    + E+++E    +  + K E
Sbjct: 239  EFPNPEWSEVSEEVKMLIRNLLKTE 263

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
            APEVL  E      D+WS GV+ Y+LL G  PF         P  +  +   +Y F    
Sbjct: 185  APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 244
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
            + E+++E    +  + K  P +R T+ E   + W++ S    K  +  +     LKE  +
Sbjct: 245  WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 301
Query: 1259 EYHDLKNKQFTS 1270
             + D+K +  ++
Sbjct: 302  RWEDVKEEMTSA 313

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
            + S+ + +QYLH   + H +++P+N++  S R +  +KL D G  +  T   +L  P  T
Sbjct: 128  MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 187
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            P   + APEVL  E      D+WS GV+ Y+LL G  PF
Sbjct: 188  PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRFEYL- 1198
            APEVL  E      D+WS GV+ Y+LL G  PF         P  +  +   +Y F    
Sbjct: 192  APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 251
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
            + E+++E    +  + K  P +R T+ E   + W++ S    K  +  +     LKE  +
Sbjct: 252  WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 308
Query: 1259 EYHDLKNK 1266
             + D+K +
Sbjct: 309  RWEDVKEE 316

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
            + S+ + +QYLH   + H +++P+N++  S R +  +KL D G  +  T   +L  P  T
Sbjct: 127  MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 186
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            P   + APEVL  E      D+WS GV+ Y+LL G  PF
Sbjct: 187  PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRFEYL- 1198
            APEVL  E      D+WS GV+ Y+LL G  PF         P  +  +   +Y F    
Sbjct: 191  APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 250
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
            + E+++E    +  + K  P +R T+ E   + W++ S    K  +  +     LKE  +
Sbjct: 251  WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 307
Query: 1259 EYHDLKNK 1266
             + D+K +
Sbjct: 308  RWEDVKEE 315

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 67.0 bits (162), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINT 1010
            + S+ + +QYLH   + H +++P+N++  S R +  +KL D G  +  T   +L  P  T
Sbjct: 137  MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 196
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            P   + APEVL  E      D+WS GV+ Y+LL G  PF
Sbjct: 197  PY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
            APEVL  E      D+WS GV+ Y+LL G  PF         P  +  +   +Y F    
Sbjct: 201  APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 260
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
            + E+++E    +  + K  P +R T+ E   + W++ S    K  +  +     LKE  +
Sbjct: 261  WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 317
Query: 1259 EYHDLKNKQFTS 1270
             + D+K +  ++
Sbjct: 318  RWEDVKEEMTSA 329

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 67.0 bits (162), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 158 DNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT 217
           +N  E    +  +  + K R   + D ++ G  LG+G  G VY A E+ S    A KV+ 
Sbjct: 10  ENNPEEELASKQKNEESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF 68
Query: 218 GKGNQYKSL---FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ 274
               +   +    + E++I + L H N++RL+  +       +I E A  G +   L + 
Sbjct: 69  KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
Query: 275 SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------ 328
           S + E   A YI +L + L Y H   + H  + P +LL+   G   L + DFG       
Sbjct: 129 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPS 186
Query: 329 SRRITSFGKLNPL 341
           SRR T  G L+ L
Sbjct: 187 SRRTTLCGTLDYL 199

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 60.5 bits (145), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R T
Sbjct: 134  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 191
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 192  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 242
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKHEVDWITLANNIDHEFWHVKDLKRETNYTF 1118
             ++    R E+ F +   E  R L+  + KH      +   +    W   +  + +N   
Sbjct: 243  RIS----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 298
Query: 1119 RLSA 1122
            + SA
Sbjct: 299  KESA 302

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 212  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 267
Query: 1215 KRAPGKRPTVEECHENRWLV 1234
            K  P +RP + E  E+ W+ 
Sbjct: 268  KHNPSQRPMLREVLEHPWIT 287

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 67.0 bits (162), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 83/164 (50%), Gaps = 7/164 (4%)
Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNEL 231
           +Q+   +   TD Y+  +++G G   +    + +++   +A K++    ++ K     E+
Sbjct: 11  QQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKII----DKSKRDPTEEI 66
Query: 232 DIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           +I+ +   H N++ L D Y+      +++EL  GGELL  + RQ +++E + +  +  + 
Sbjct: 67  EILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTIT 126
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRRI 332
             ++Y+H   + H  L P ++L     G    + + DFG ++++
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 959  LQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRV-TKLGTLIHPINTPNPEF 1015
            ++YLH +G+ H +++P N++    S     +++ D G  +++  + G L  P  T N  F
Sbjct: 129  VEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTAN--F 186
Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
             APEVL  +      D+WS GVL Y  L+G +PF
Sbjct: 187  VAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 67.0 bits (162), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHD 247
           D LG G    V   +   + + YA K++  +    +S    E++++ Q   HRN++ L +
Sbjct: 19  DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
            +E +D F ++ E   GG +L  + ++ ++ E + +  ++ + S LD++H   IAH  L 
Sbjct: 79  FFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLK 138
Query: 308 PGDLLVAHPGG-RHLLLTDFGLSRRITSFGKLNPL 341
           P ++L  HP     + + DFGL   I   G  +P+
Sbjct: 139 PENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPI 173

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQ-VKLIDLGCTQRVTKLGTLIHPINT 1010
            V  V   L +LH +G+ H +++P+N++      V  VK+ D G    + KL     PI+T
Sbjct: 117  VQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGI-KLNGDCSPIST 175
Query: 1011 P-------NPEFAAPEVLA----EEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQS 1053
            P       + E+ APEV+     E  I+ +  D+WS GV+ Y+LLSG  PF G+ 
Sbjct: 176  PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 67.0 bits (162), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
            S+ + +QYLH   + H +++P+N++  S R +  +KL D G  +  T   +L  P  TP 
Sbjct: 169  SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 228
Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
              + APEVL  E      D WS GV+ Y+LL G  PF
Sbjct: 229  --YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS----EPETRQNVNFVRYRF-EYL 1198
            APEVL  E      D WS GV+ Y+LL G  PF         P  +  +   +Y F    
Sbjct: 231  APEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPE 290
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
            + E+++E    +  + K  P +R T+ E   + W+  S    K  +  +     LKE  +
Sbjct: 291  WSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQS---TKVPQTPLHTSRVLKEDKE 347
Query: 1259 EYHDLK 1264
             + D+K
Sbjct: 348  RWEDVK 353

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 67.0 bits (162), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 158 DNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT 217
           +N  E    +  +  + K R   + D ++ G  LG+G  G VY A E+ S    A KV+ 
Sbjct: 1   ENNPEEELASKQKNEESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF 59
Query: 218 GKGNQYKSL---FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ 274
               +   +    + E++I + L H N++RL+  +       +I E A  G +   L + 
Sbjct: 60  KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 119
Query: 275 SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------ 328
           S + E   A YI +L + L Y H   + H  + P +LL+   G   L + DFG       
Sbjct: 120 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPS 177
Query: 329 SRRITSFGKLNPL 341
           SRR T  G L+ L
Sbjct: 178 SRRTTLCGTLDYL 190

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R T
Sbjct: 125  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 182
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 183  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 233
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
             ++    R E+ F +   E  R L+  + KH
Sbjct: 234  RIS----RVEFTFPDFVTEGARDLISRLLKH 260

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 203  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 258
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 259  KHNPSQRPMLREVLEHPWI 277

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 67.0 bits (162), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 174 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGNQYKSLFK 228
            K + +   + +++   LG+G  G V    E+++GR YA K     V+  K     +L +
Sbjct: 142 AKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE 201
Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
           N   ++    H  L  L  S++T D    + E A GGEL   L+R+  ++E     Y  +
Sbjct: 202 NR--VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 289 LLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           ++S LDY+H   ++ +  L   +L++   G  H+ +TDFGL +
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGLCK 300

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
Query: 953  TSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
              ++  L YLH  + + + +++ +N+++   +   +K+ D G  +   K G  +      
Sbjct: 258  AEIVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKTF-CG 314
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
             PE+ APEVL +       D W  GV+ Y ++ G  PF  Q   +  + +     RF
Sbjct: 315  TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 371

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 66.6 bits (161), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 77/143 (53%), Gaps = 7/143 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC--HRNLVRLHDS 248
           LG G   I    V + S + +A K+++ +    ++  + E+  + +LC  H N+V+LH+ 
Sbjct: 19  LGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITAL-KLCEGHPNIVKLHEV 74
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
           +  +    ++ EL  GGEL   + ++ +++E + ++ +R+L+S + +MH + + H  L P
Sbjct: 75  FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKP 134
Query: 309 GDLLVAHPGGR-HLLLTDFGLSR 330
            +LL         + + DFG +R
Sbjct: 135 ENLLFTDENDNLEIKIIDFGFAR 157

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 22/150 (14%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHP 1007
            +Y +  ++  + ++H  G+ H +++P+N++      ++++K+ID G          L  P
Sbjct: 109  SYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFG-------FARLKPP 161
Query: 1008 INTP--NPEF----AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ-------SE 1054
             N P   P F    AAPE+L +       D+WS GV+ Y +LSG  PF+         S 
Sbjct: 162  DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSA 221
Query: 1055 PETRQNVNFVRYRFE-YLFKELTQEATRFL 1083
             E  + +    + FE   +K ++QEA   +
Sbjct: 222  VEIMKKIKKGDFSFEGEAWKNVSQEAKDLI 251

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 1133 IPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ-------SEPETR 1185
            + +  F     APE+L +       D+WS GV+ Y +LSG  PF+         S  E  
Sbjct: 166  LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM 225
Query: 1186 QNVNFVRYRFE-YLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + +    + FE   +K ++QEA   +  +    P KR  +     N WL
Sbjct: 226  KKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWL 274

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 66.6 bits (161), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 174 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGNQYKSLFK 228
            K + +   + +++   LG+G  G V    E+++GR YA K     V+  K     +L +
Sbjct: 139 AKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE 198
Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
           N   ++    H  L  L  S++T D    + E A GGEL   L+R+  ++E     Y  +
Sbjct: 199 NR--VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 256
Query: 289 LLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           ++S LDY+H   ++ +  L   +L++   G  H+ +TDFGL +
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGLCK 297

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 955  VLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
            ++  L YLH  + + + +++ +N+++   +   +K+ D G  +   K G  +       P
Sbjct: 257  IVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKTF-CGTP 313
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
            E+ APEVL +       D W  GV+ Y ++ G  PF  Q   +  + +     RF
Sbjct: 314  EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 368

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 66.6 bits (161), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
            +L+ L+Y H   + H +++P  V++AS   S  VKL   G   ++ + G L+       P
Sbjct: 139  ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG-LVAGGRVGTP 197
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
             F APEV+  EP     DVW  GV+ ++LLSG  PF G  E
Sbjct: 198  HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY---LF 1199
             APEV+  EP     DVW  GV+ ++LLSG  PF G  E   R     ++ +++     +
Sbjct: 200  MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RLFEGIIKGKYKMNPRQW 256
Query: 1200 KELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
              +++ A   +  +    P +R TV E   + WL
Sbjct: 257  SHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 66.6 bits (161), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
            +L+ L+Y H   + H +++P  V++AS   S  VKL   G   ++ + G L+       P
Sbjct: 141  ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG-LVAGGRVGTP 199
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
             F APEV+  EP     DVW  GV+ ++LLSG  PF G  E
Sbjct: 200  HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 240

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY---LF 1199
             APEV+  EP     DVW  GV+ ++LLSG  PF G  E   R     ++ +++     +
Sbjct: 202  MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RLFEGIIKGKYKMNPRQW 258
Query: 1200 KELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
              +++ A   +  +    P +R TV E   + WL
Sbjct: 259  SHISESAKDLVRRMLMLDPAERITVYEALNHPWL 292

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 66.6 bits (161), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 83/164 (50%), Gaps = 7/164 (4%)
Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNEL 231
           +Q+   +   TD Y+  +++G G   +    + +++   +A K++    ++ K     E+
Sbjct: 11  QQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKII----DKSKRDPTEEI 66
Query: 232 DIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           +I+ +   H N++ L D Y+      +++EL  GGELL  + RQ +++E + +  +  + 
Sbjct: 67  EILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTIT 126
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRRI 332
             ++Y+H   + H  L P ++L     G    + + DFG ++++
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 959  LQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRV-TKLGTLIHPINTPNPEF 1015
            ++YLH +G+ H +++P N++    S     +++ D G  +++  + G L+ P  T N  F
Sbjct: 129  VEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN--F 186
Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
             APEVL  +      D+WS GVL Y +L+G +PF
Sbjct: 187  VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 178 TKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL 237
           TK   + +D  ++LG G  G VY A+ + +G+  A K +  + +  + +   E+ IM Q 
Sbjct: 24  TKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEII--KEISIMQQC 81
Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM 296
              ++V+ + SY       I+ E  G G +   +  R    TE +IA  ++  L GL+Y+
Sbjct: 82  DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYL 141
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           H +   H  +  G++L+   G  H  L DFG++ ++T
Sbjct: 142 HFMRKIHRDIKAGNILLNTEG--HAKLADFGVAGQLT 176

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT-KLGTLIHP 1007
            A  + S L GL+YLH+    H +I+  N+++ +      KL D G   ++T  +      
Sbjct: 128  ATILQSTLKGLEYLHFMRKIHRDIKAGNILLNT--EGHAKLADFGVAGQLTDXMAKRNXV 185
Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            I TP   + APEV+ E       D+WS G+ A  +  G  P+
Sbjct: 186  IGTPF--WMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 74/136 (54%), Gaps = 12/136 (8%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIHPINTP 1011
            ++  +QY H + + H +++ +N+++ +   + +K+ D G +   T   KL T        
Sbjct: 122  IVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTFGNKLDTF-----CG 174
Query: 1012 NPEFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE- 1069
            +P +AAPE+   ++   P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR   
Sbjct: 175  SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 234
Query: 1070 YLFKELTQEATRFLML 1085
            Y+  +      +FL+L
Sbjct: 235  YMSTDCENLLKKFLIL 250

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
            P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR   Y+  +      +FL+L 
Sbjct: 192  PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL- 250
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
                P KR T+E+  ++RW+
Sbjct: 251  ---NPSKRGTLEQIMKDRWM 267

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIHPINT 1010
             ++  +QY H + + H +++ +N+++ +   + +K+ D G +   T   KL T       
Sbjct: 121  QIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTFGNKLDTF-----C 173
Query: 1011 PNPEFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
             +P +AAPE+   ++   P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR  
Sbjct: 174  GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 233
Query: 1070 -YLFKELTQEATRFLML 1085
             Y+  +      +FL+L
Sbjct: 234  FYMSTDCENLLKKFLIL 250

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
            P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR   Y+  +      +FL+L 
Sbjct: 192  PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL- 250
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
                P KR T+E+  ++RW+
Sbjct: 251  ---NPSKRGTLEQIMKDRWM 267

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIHPINT 1010
             ++  +QY H + + H +++ +N+++ +   + +K+ D G +   T   KL T       
Sbjct: 121  QIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTFGNKLDTF-----C 173
Query: 1011 PNPEFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
             +P +AAPE+   ++   P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR  
Sbjct: 174  GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 233
Query: 1070 -YLFKELTQEATRFLML 1085
             Y+  +      +FL+L
Sbjct: 234  FYMSTDCENLLKKFLIL 250

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
            P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR   Y+  +      +FL+L 
Sbjct: 192  PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL- 250
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
                P KR T+E+  ++RW+
Sbjct: 251  ---NPSKRGTLEQIMKDRWM 267

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIHPINT 1010
             ++  +QY H + + H +++ +N+++ +   + +K+ D G +   T   KL T       
Sbjct: 114  QIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTFGNKLDTF-----C 166
Query: 1011 PNPEFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
             +P +AAPE+   ++   P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR  
Sbjct: 167  GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 226
Query: 1070 -YLFKELTQEATRFLML 1085
             Y+  +      +FL+L
Sbjct: 227  FYMSTDCENLLKKFLIL 243

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
            P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR   Y+  +      +FL+L 
Sbjct: 185  PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL- 243
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
                P KR T+E+  ++RW+
Sbjct: 244  ---NPSKRGTLEQIMKDRWM 260

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 183 DAYDFGDEL-GRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHR 240
           D Y    EL G G    V  AV   +G+ YA K++  +    +S    E++ + Q   ++
Sbjct: 12  DMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNK 71
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           N++ L + +E    F ++ E   GG +L  + +Q ++ E + +  +R + + LD++H   
Sbjct: 72  NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG 131
Query: 301 IAHLGLTPGDLLVAHP 316
           IAH  L P ++L   P
Sbjct: 132 IAHRDLKPENILCESP 147

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 18/117 (15%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMAS---VRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            V  V   L +LH +G+ H +++P+N++  S   V  V++   DLG      KL     PI
Sbjct: 117  VRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSG---MKLNNSCTPI 173
Query: 1009 NTP-------NPEFAAPEVL---AEEPIF--PQTDVWSAGVLAYVLLSGASPFRGQS 1053
             TP       + E+ APEV+    ++  F   + D+WS GV+ Y++LSG  PF G  
Sbjct: 174  TTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHC 230

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           +D G  LG+G  G VY A ER S    A KV+     +   +    + E++I + L H N
Sbjct: 14  FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            H  + P +LL+   G   L + DFG       SRR T  G L+ L
Sbjct: 134 IHRDIKPENLLLGSNG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 177

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R T
Sbjct: 112  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--NGELKIADFGWSVHAPSSRRTT 169
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 170  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKHEVDW-ITLANNIDH 1102
             ++    R E+ F +   E  R L+  + KH     +TLA  ++H
Sbjct: 221  RIS----RVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEH 261

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 1145 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQ 1204
            PE++       + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   
Sbjct: 179  PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS----RVEFTFPDFVT 234
Query: 1205 EATRFLM-LIFKRAPGKRPTVEECHENRWL 1233
            E  R L+  + K    +R T+ E  E+ W+
Sbjct: 235  EGARDLISRLLKHNASQRLTLAEVLEHPWI 264

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
           K R   + D ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E+
Sbjct: 6   KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
           +I + L H N++RL+  +       +I E A  GE+   L + S + E   A YI +L +
Sbjct: 65  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELAN 124
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            L Y H   + H  + P +LL+   G   L + DFG S
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWS 160

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R  
Sbjct: 113  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRXX 170
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 171  LXGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
             ++    R E+ F +   E  R L+  + KH
Sbjct: 222  RIS----RVEFTFPDFVTEGARDLISRLLKH 248

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 191  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 246
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 247  KHNPSQRPMLREVLEHPWI 265

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---- 226
           G  +    K + D Y     LG G  G V  A ER + +  A K+++ +     S     
Sbjct: 4   GSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREAD 63
Query: 227 ----FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDI 282
                + E++I+ +L H  ++++ + ++ +D + I+ EL  GGEL   +       E   
Sbjct: 64  PALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATC 122
Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSR 330
             Y  Q+L  + Y+H   I H  L P ++L++      L+ +TDFG S+
Sbjct: 123 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 171

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 53.5 bits (127), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 947  KDAYC---VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLG 1002
            K+A C      +L  +QYLH  G+ H +++P+NV+++S      +K+ D G ++ + +  
Sbjct: 118  KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 177
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFP---QTDVWSAGVLAYVLLSGASPF-RGQSEPETR 1058
             +     TP   + APEVL            D WS GV+ ++ LSG  PF   +++   +
Sbjct: 178  LMRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 235
Query: 1059 QNVNFVRYRF-EYLFKELTQEATRFL--MLIFKHEVDWITLANNIDHEFWHVKDLKRE 1113
              +   +Y F   ++ E++++A   +  +L+   +  + T    + H +   +D+KR+
Sbjct: 236  DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT-EEALRHPWLQDEDMKRK 292

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 73/134 (54%), Gaps = 6/134 (4%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++  +QY H + + H +++ +N+++ +   + +K+ D G +   T  G  +      +P
Sbjct: 121  QIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFT-FGNKLDEF-CGSP 176
Query: 1014 EFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YL 1071
             +AAPE+   ++   P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR   Y+
Sbjct: 177  PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 236
Query: 1072 FKELTQEATRFLML 1085
              +      +FL+L
Sbjct: 237  STDCENLLKKFLIL 250

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
            P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR   Y+  +      +FL+L 
Sbjct: 192  PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL- 250
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
                P KR T+E+  ++RW+
Sbjct: 251  ---NPSKRGTLEQIMKDRWM 267

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 158 DNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT 217
           +N  E    +  +  + K R   + D ++ G  LG+G  G VY A E+ S    A KV+ 
Sbjct: 10  ENNPEEELASKQKNEESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF 68
Query: 218 GKGNQYKSL---FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ 274
               +   +    + E++I + L H N++RL+  +       +I E A  G +   L + 
Sbjct: 69  KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 128
Query: 275 SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           S + E   A YI +L + L Y H   + H  + P +LL+   G   L + DFG S
Sbjct: 129 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWS 181

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R  
Sbjct: 134  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRDD 191
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 192  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 242
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKHEVDWITLANNIDHEFWHVKDLKRETNYTF 1118
             ++    R E+ F +   E  R L+  + KH      +   +    W   +  + +N   
Sbjct: 243  RIS----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 298
Query: 1119 RLSA 1122
            + SA
Sbjct: 299  KESA 302

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 212  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 267
Query: 1215 KRAPGKRPTVEECHENRWLV 1234
            K  P +RP + E  E+ W+ 
Sbjct: 268  KHNPSQRPMLREVLEHPWIT 287

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDI 233
           + K   D +D    LG+G  G VY A E+ +    A KV+     + + +    + E++I
Sbjct: 8   KRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 234 MNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
            + L H N++R+++ +  +    ++ E A  GEL   L +   + E   A ++ +L   L
Sbjct: 68  QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            Y H   + H  + P +LL+ + G   L + DFG S
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKG--ELKIADFGWS 161

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 947  KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT------QRVTK 1000
            + A  +  + D L Y H R + H +I+P+N++M      ++K+ D G +      +R   
Sbjct: 115  RSATFMEELADALHYCHERKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLRRRXM 172
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
             GTL         ++  PE++  +    + D+W AGVL Y  L G  PF   S  ET + 
Sbjct: 173  CGTL---------DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR 223
Query: 1061 VNFVRYRF 1068
            +  V  +F
Sbjct: 224  IVNVDLKF 231

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           LG+G  G V    E+++GR YA K     V+  K     +L +N   ++    H  L  L
Sbjct: 18  LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR--VLQNSRHPFLTAL 75
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHL 304
             S++T D    + E A GGEL   L+R+  ++E     Y  +++S LDY+H   ++ + 
Sbjct: 76  KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 135
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L   +L++   G  H+ +TDFGL +
Sbjct: 136 DLKLENLMLDKDG--HIKITDFGLCK 159

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 955  VLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
            ++  L YLH  + + + +++ +N+++   +   +K+ D G  +   K G  +       P
Sbjct: 119  IVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKXF-CGTP 175
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
            E+ APEVL +       D W  GV+ Y ++ G  PF  Q   +  + +     RF
Sbjct: 176  EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 230

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--------FKNE 230
           K + D Y     LG G  G V  A ER + +  A K+++ +     S          + E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           ++I+ +L H  ++++ + ++ +D + I+ EL  GGEL   +       E     Y  Q+L
Sbjct: 66  IEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSR 330
             + Y+H   I H  L P ++L++      L+ +TDFG S+
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 947  KDAYC---VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLG 1002
            K+A C      +L  +QYLH  G+ H +++P+NV+++S      +K+ D G ++ + +  
Sbjct: 112  KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 171
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFP---QTDVWSAGVLAYVLLSGASPF 1049
             +     TP   + APEVL            D WS GV+ ++ LSG  PF
Sbjct: 172  LMRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 80/152 (52%), Gaps = 10/152 (6%)
Query: 958  GLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFA 1016
             +Q+LH   + H +++P+N++  S  +   +KL D G  +  T+   L  P  TP   + 
Sbjct: 121  AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ-NALQTPCYTPY--YV 177
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF---RGQS-EPETRQNVNFVRYRF-EYL 1071
            APEVL  E      D+WS GV+ Y+LL G  PF    GQ+  P  ++ +   +Y F    
Sbjct: 178  APEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 237
Query: 1072 FKELTQEATRFLMLIFKHE-VDWITLANNIDH 1102
            + E++++A + + L+ K +  + +T+   ++H
Sbjct: 238  WSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 269

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF---RGQS-EPETRQNVNFVRYRF-EYL 1198
            APEVL  E      D+WS GV+ Y+LL G  PF    GQ+  P  ++ +   +Y F    
Sbjct: 178  APEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 237
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + E++++A + + L+ K  P +R T+ +   + W+
Sbjct: 238  WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 272

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           LG+G  G V    E+++GR YA K     V+  K     +L +N   ++    H  L  L
Sbjct: 17  LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR--VLQNSRHPFLTAL 74
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHL 304
             S++T D    + E A GGEL   L+R+  ++E     Y  +++S LDY+H   ++ + 
Sbjct: 75  KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 134
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L   +L++   G  H+ +TDFGL +
Sbjct: 135 DLKLENLMLDKDG--HIKITDFGLCK 158

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
Query: 953  TSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
              ++  L YLH  + + + +++ +N+++   +   +K+ D G  +   K G  +      
Sbjct: 116  AEIVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKXF-CG 172
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
             PE+ APEVL +       D W  GV+ Y ++ G  PF  Q   +  + +     RF
Sbjct: 173  TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 229

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--------FKNE 230
           K + D Y     LG G  G V  A ER + +  A K+++ +     S          + E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           ++I+ +L H  ++++ + ++ +D + I+ EL  GGEL   +       E     Y  Q+L
Sbjct: 66  IEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSR 330
             + Y+H   I H  L P ++L++      L+ +TDFG S+
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 947  KDAYC---VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLG 1002
            K+A C      +L  +QYLH  G+ H +++P+NV+++S      +K+ D G ++ + +  
Sbjct: 112  KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 171
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFP---QTDVWSAGVLAYVLLSGASPF-RGQSEPETR 1058
             +     TP   + APEVL            D WS GV+ ++ LSG  PF   +++   +
Sbjct: 172  LMRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 229
Query: 1059 QNVNFVRYRF-EYLFKELTQEATRFL--MLIFKHEVDWITLANNIDHEFWHVKDLKRE 1113
              +   +Y F   ++ E++++A   +  +L+   +  + T    + H +   +D+KR+
Sbjct: 230  DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT-EEALRHPWLQDEDMKRK 286

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 14/154 (9%)
Query: 958  GLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLGTLIHPINTP--NPE 1014
             +Q+LH   + H +++P+N++  S  +   +KL D G  +  T+     + + TP   P 
Sbjct: 140  AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ-----NALQTPCYTPY 194
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF---RGQS-EPETRQNVNFVRYRF-E 1069
            + APEVL  E      D+WS GV+ Y+LL G  PF    GQ+  P  ++ +   +Y F  
Sbjct: 195  YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 254
Query: 1070 YLFKELTQEATRFLMLIFKHE-VDWITLANNIDH 1102
              + E++++A + + L+ K +  + +T+   ++H
Sbjct: 255  PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF---RGQS-EPETRQNVNFVRYRF-EYL 1198
            APEVL  E      D+WS GV+ Y+LL G  PF    GQ+  P  ++ +   +Y F    
Sbjct: 197  APEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 256
Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + E++++A + + L+ K  P +R T+ +   + W+
Sbjct: 257  WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--------FKNE 230
           K + D Y     LG G  G V  A ER + +  A K+++ +     S          + E
Sbjct: 5   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 64
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           ++I+ +L H  ++++ + ++ +D + I+ EL  GGEL   +       E     Y  Q+L
Sbjct: 65  IEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 123
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSR 330
             + Y+H   I H  L P ++L++      L+ +TDFG S+
Sbjct: 124 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 164

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 947  KDAYC---VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLG 1002
            K+A C      +L  +QYLH  G+ H +++P+NV+++S      +K+ D G ++ + +  
Sbjct: 111  KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 170
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFP---QTDVWSAGVLAYVLLSGASPF-RGQSEPETR 1058
             +     TP   + APEVL            D WS GV+ ++ LSG  PF   +++   +
Sbjct: 171  LMRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK 228
Query: 1059 QNVNFVRYRF-EYLFKELTQEATRFL--MLIFKHEVDWITLANNIDHEFWHVKDLKRE 1113
              +   +Y F   ++ E++++A   +  +L+   +  + T    + H +   +D+KR+
Sbjct: 229  DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT-EEALRHPWLQDEDMKRK 285

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 169 ARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY-KSLF 227
           + GR+       I D + F  +LG G  G V+   ERSSG     K +    +Q      
Sbjct: 8   SSGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQI 67
Query: 228 KNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLT----RQSYYTEYDIA 283
           + E++++  L H N++++ + +E   +  I+ E   GGELL  +     R    +E  +A
Sbjct: 68  EAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVA 127
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH-LLLTDFGLSRRITS 334
             ++Q+++ L Y H   + H  L P ++L         + + DFGL+    S
Sbjct: 128 ELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 6/159 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  +++ L Y H + + H +++P+N++         +K+ID G  +      +  H 
Sbjct: 127  AELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL---FKSDEHS 183
Query: 1008 INTPNPE-FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             N      + APEV   +  F + D+WSAGV+ Y LL+G  PF G S  E +Q   +   
Sbjct: 184  TNAAGTALYMAPEVFKRDVTF-KCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP 242
Query: 1067 RFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFW 1105
             +    + LT +A   L  +   + +    A  + H  W
Sbjct: 243  NYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEW 281

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 1108 KDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQ-----------APEVLAEEPIFPQ 1156
            KDLK E       S  + I   + G+ + LFK+ E            APEV   +  F +
Sbjct: 148  KDLKPENILFQDTSPHSPIKIIDFGL-AELFKSDEHSTNAAGTALYMAPEVFKRDVTF-K 205
Query: 1157 TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKR 1216
             D+WSAGV+ Y LL+G  PF G S  E +Q   +    +    + LT +A   L  +  +
Sbjct: 206  CDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTK 265
Query: 1217 APGKRPTVEECHENRWL 1233
             P +RP+  +   + W 
Sbjct: 266  DPERRPSAAQVLHHEWF 282

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--------FKNE 230
           K + D Y     LG G  G V  A ER + +  A K+++ +     S          + E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           ++I+ +L H  ++++ + ++ +D + I+ EL  GGEL   +       E     Y  Q+L
Sbjct: 66  IEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSR 330
             + Y+H   I H  L P ++L++      L+ +TDFG S+
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 947  KDAYC---VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLG 1002
            K+A C      +L  +QYLH  G+ H +++P+NV+++S      +K+ D G ++ + +  
Sbjct: 112  KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 171
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFP---QTDVWSAGVLAYVLLSGASPF 1049
             +     TP   + APEVL            D WS GV+ ++ LSG  PF
Sbjct: 172  LMRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAK-----VMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           LG+G  G V    E+++GR YA K     V+  K     +L +N   ++    H  L  L
Sbjct: 16  LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR--VLQNSRHPFLTAL 73
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHL 304
             S++T D    + E A GGEL   L+R+  ++E     Y  +++S LDY+H   ++ + 
Sbjct: 74  KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 133
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L   +L++   G  H+ +TDFGL +
Sbjct: 134 DLKLENLMLDKDG--HIKITDFGLCK 157

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 955  VLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
            ++  L YLH  + + + +++ +N+++   +   +K+ D G  +   K G  +       P
Sbjct: 117  IVSALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEGIKDGATMKXF-CGTP 173
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
            E+ APEVL +       D W  GV+ Y ++ G  PF  Q   +  + +     RF
Sbjct: 174  EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 228

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E++I + L H N
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            H  + P +LL+   G   L + DFG       SRR T  G L+ L
Sbjct: 133 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 176

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R T
Sbjct: 111  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 168
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 169  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
             ++    R E+ F +   E  R L+  + KH
Sbjct: 220  RIS----RVEFTFPDFVTEGARDLISRLLKH 246

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 189  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 244
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 245  KHNPSQRPMLREVLEHPWI 263

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 4/166 (2%)
Query: 176 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK--NELDI 233
           T  +P    Y     +G+G    V  A    +GR  A K++        SL K   E+ I
Sbjct: 8   TDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRI 67
Query: 234 MNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
           M  L H N+V+L +  ET+ +  ++ E A GGE+   L       E +     RQ++S +
Sbjct: 68  MKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 127
Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
            Y H+  I H  L   +LL+   G  ++ + DFG S   T   KL+
Sbjct: 128 QYCHQKYIVHRDLKAENLLL--DGDMNIKIADFGFSNEFTVGNKLD 171

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIHPINT 1010
             ++  +QY H + + H +++ +N+++     + +K+ D G +   T   KL T       
Sbjct: 122  QIVSAVQYCHQKYIVHRDLKAENLLLDG--DMNIKIADFGFSNEFTVGNKLDTF-----C 174
Query: 1011 PNPEFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
             +P +AAPE+   ++   P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR  
Sbjct: 175  GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234
Query: 1070 Y 1070
            +
Sbjct: 235  F 235

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIF 1214
            P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR  +    ++ +    L  + 
Sbjct: 193  PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY---MSTDCENLLKKLL 249
Query: 1215 KRAPGKRPTVEECHENRWL 1233
               P KR ++E+  ++RW+
Sbjct: 250  VLNPIKRGSLEQIMKDRWM 268

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++  +QY H + + H +++ +N+++ +   + +K+ D G +   T  G  +       P
Sbjct: 121  QIVSAVQYCHQKFIVHRDLKAENLLLDA--DMNIKIADFGFSNEFT-FGNKLDAF-CGAP 176
Query: 1014 EFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YL 1071
             +AAPE+   ++   P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR   Y+
Sbjct: 177  PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 236
Query: 1072 FKELTQEATRFLML 1085
              +      +FL+L
Sbjct: 237  STDCENLLKKFLIL 250

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
            P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR   Y+  +      +FL+L 
Sbjct: 192  PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL- 250
Query: 1214 FKRAPGKRPTVEECHENRWL 1233
                P KR T+E+  ++RW+
Sbjct: 251  ---NPSKRGTLEQIMKDRWM 267

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E++I + L H N
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            H  + P +LL+   G   L + DFG       SRR T  G L+ L
Sbjct: 130 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 173

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R T
Sbjct: 108  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 166  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
             ++    R E+ F +   E  R L+  + KH
Sbjct: 217  RIS----RVEFTFPDFVTEGARDLISRLLKH 243

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 186  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 241
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 242  KHNPSQRPMLREVLEHPWI 260

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E++I + L H N
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            H  + P +LL+   G   L + DFG       SRR T  G L+ L
Sbjct: 135 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 178

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R T
Sbjct: 113  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 170
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE +       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 171  LCGTL---------DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
             ++    R E+ F +   E  R L+  + KH
Sbjct: 222  RIS----RVEFTFPDFVTEGARDLISRLLKH 248

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 191  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 246
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 247  KHNPSQRPXLREVLEHPWI 265

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLXGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV      +
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVKGRTWXL 198
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                   PE+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 199  ----AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E  APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 42  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 192

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 143  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 198  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 256  VRFPSHFSSDLKDLLRNLLQV 276

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           +D G  LG+G  G VY A ER S    A KV+     +   +    + E++I + L H N
Sbjct: 14  FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            H  + P +LL+   G   L + DFG       SRR T  G L+ L
Sbjct: 134 IHRDIKPENLLLGSNG--ELKIADFGWSVHAPSSRRDTLCGTLDYL 177

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R T
Sbjct: 112  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--NGELKIADFGWSVHAPSSRRDT 169
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 170  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKHEVDW-ITLANNIDH 1102
             ++    R E+ F +   E  R L+  + KH     +TLA  ++H
Sbjct: 221  RIS----RVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEH 261

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 1145 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQ 1204
            PE++       + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   
Sbjct: 179  PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS----RVEFTFPDFVT 234
Query: 1205 EATRFLM-LIFKRAPGKRPTVEECHENRWL 1233
            E  R L+  + K    +R T+ E  E+ W+
Sbjct: 235  EGARDLISRLLKHNASQRLTLAEVLEHPWI 264

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
           K R   + D ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E+
Sbjct: 6   KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
           +I + L H N++RL+  +       +I E A  G +   L + S + E   A YI +L +
Sbjct: 65  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            L Y H   + H  + P +LL+   G   L + DFG       SRR T  G L+ L
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 178

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R T
Sbjct: 113  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 170
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 171  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
             ++    R E+ F +   E  R L+  + KH
Sbjct: 222  RIS----RVEFTFPDFVTEGARDLISRLLKH 248

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 191  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 246
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 247  KHNPSQRPMLREVLEHPWI 265

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ AP ++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E++I + L H N
Sbjct: 9   FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 69  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 128
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            H  + P +LL+   G   L + DFG       SRR T  G L+ L
Sbjct: 129 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 172

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R T
Sbjct: 107  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 164
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 165  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 215
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
             ++    R E+ F +   E  R L+
Sbjct: 216  RIS----RVEFTFPDFVTEGARDLI 236

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 185  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 240
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 241  KHNPSQRPMLREVLEHPWI 259

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 28  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 86
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 87  FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 146
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 147 LDLIYRDLKPENLLIDEQG--YIQVTDFGFAKRV 178

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 129  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDEQGYIQV--TDFGFAKRVK--GRTW 183
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 184  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 241
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 242  VRFPSHFSSDLKDLLRNLLQV 262

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
           K R   + D ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E+
Sbjct: 4   KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
           +I + L H N++RL+  +       +I E A  G +   L + S + E   A YI +L +
Sbjct: 63  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            L Y H   + H  + P +LL+   G   L + DFG       SRR T  G L+ L
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 176

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R T
Sbjct: 111  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 168
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 169  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
             ++    R E+ F +   E  R L+
Sbjct: 220  RIS----RVEFTFPDFVTEGARDLI 240

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 189  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 244
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 245  KHNPSQRPMLREVLEHPWI 263

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHD 247
           D LG G    V   +   + + YA K++  +    +S    E++++ Q   HRN++ L +
Sbjct: 19  DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
            +E +D F ++ E   GG +L  + ++ ++ E + +  ++ + S LD++H   IAH  L 
Sbjct: 79  FFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLK 138
Query: 308 PGDLLVAHPGG-RHLLLTDFGLSRRITSFGKLNPL 341
           P ++L  HP     + + DF L   I   G  +P+
Sbjct: 139 PENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPI 173

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 18/117 (15%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA---SVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            V  V   L +LH +G+ H +++P+N++      V  V++   DLG      KL     PI
Sbjct: 117  VQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLG---SGIKLNGDCSPI 173
Query: 1009 NTP-------NPEFAAPEVLA----EEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQS 1053
            +TP       + E+ APEV+     E  I+ +  D+WS GV+ Y+LLSG  PF G+ 
Sbjct: 174  STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
           +D YDF  ++G G  G+     ++ +    A K +  +G       + E+     L H N
Sbjct: 19  SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIE-RGAAIDENVQREIINHRSLRHPN 77
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +VR  +   T     II E A GGEL   +     ++E +   + +QLLSG+ Y H + I
Sbjct: 78  IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI 137
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            H  L   + L+       L + DFG S+
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSK 166

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH--PINT-P 1011
            +L G+ Y H   +CH +++ +N ++    + ++K+ D G ++      +++H  P +T  
Sbjct: 125  LLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTVG 179
Query: 1012 NPEFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEP----ETRQNVNFVRY 1066
             P + APEVL  +    +  DVWS GV  YV+L GA PF    EP    +T Q +  V+Y
Sbjct: 180  TPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY 239
Query: 1067 RFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVK----DLKRETN 1115
                  + ++ E    +  IF  +         I    W +K    DL  E+N
Sbjct: 240  SIPDDIR-ISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESN 291

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 1127 GWSEKGIPSALFKTKEQAPEVLAEEPIFPQ------TDVWSAGVLAYVLLSGASPFRGQS 1180
            G+S+  +  +  K+    P  +A E +  Q       DVWS GV  YV+L GA PF    
Sbjct: 163  GYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222
Query: 1181 EP----ETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL--- 1233
            EP    +T Q +  V+Y      + ++ E    +  IF   P  R ++ E   + W    
Sbjct: 223  EPRDYRKTIQRILSVKYSIPDDIR-ISPECCHLISRIFVADPATRISIPEIKTHSWFLKN 281
Query: 1234 VPSEYM 1239
            +P++ M
Sbjct: 282  LPADLM 287

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   + E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
           K R   + D ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E+
Sbjct: 2   KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
           +I + L H N++RL+  +       +I E A  G +   L + S + E   A YI +L +
Sbjct: 61  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            L Y H   + H  + P +LL+   G   L + DFG       SRR T  G L+ L
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSCHAPSSRRTTLSGTLDYL 174

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 60.1 bits (144), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGC----TQRVTKL 1001
             + A  +T + + L Y H + + H +I+P+N+++ S   +++      C    ++R T  
Sbjct: 109  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS 168
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET + +
Sbjct: 169  GTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
Query: 1062 NFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
            +    R E+ F +   E  R L+  + KH
Sbjct: 220  S----RVEFTFPDFVTEGARDLISRLLKH 244

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 187  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 242
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 243  KHNPSQRPMLREVLEHPWI 261

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--------FKNE 230
           K + D Y     LG G  G V  A ER + +  A ++++ +     S          + E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           ++I+ +L H  ++++ + ++ +D + I+ EL  GGEL   +       E     Y  Q+L
Sbjct: 191 IEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 249
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSR 330
             + Y+H   I H  L P ++L++      L+ +TDFG S+
Sbjct: 250 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 947  KDAYC---VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLG 1002
            K+A C      +L  +QYLH  G+ H +++P+NV+++S      +K+ D G ++ + +  
Sbjct: 237  KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 296
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFP---QTDVWSAGVLAYVLLSGASPF 1049
             +     TP   + APEVL            D WS GV+ ++ LSG  PF
Sbjct: 297  LMRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 62  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 120
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 181 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 212

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-----TK 1000
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV     T 
Sbjct: 163  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVKGATWTL 219
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
             GT         PE+ APE++  +      D W+ GVL Y + +G  PF      +  + 
Sbjct: 220  CGT---------PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 270
Query: 1061 VNFVRYRFEYLFKELTQEATRFLMLI 1086
            +   + RF   F    ++  R L+ +
Sbjct: 271  IVSGKVRFPSHFSSDLKDLLRNLLQV 296

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 36  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 94
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   + E     Y  Q++   +Y+H 
Sbjct: 95  FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 154
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 155 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 186

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 137  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 191
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 192  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 249
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 250  VRFPSHFSSDLKDLLRNLLQV 270

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 947  KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLI 1005
            +  +    ++ GLQ+LH +G+ + +++ DN+++   +   +K+ D G C + +  LG   
Sbjct: 119  RATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD--KDGHIKIADFGMCKENM--LGDAK 174
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                   P++ APE+L  +      D WS GVL Y +L G SPF GQ E E   +   +R
Sbjct: 175  TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS---IR 231
Query: 1066 YRFEYLFKELTQEATRFLMLIFKHE 1090
                +  + L +EA   L+ +F  E
Sbjct: 232  MDNPFYPRWLEKEAKDLLVKLFVRE 256

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE+L  +      D WS GVL Y +L G SPF GQ E E   +   +R    +  + L 
Sbjct: 186  APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS---IRMDNPFYPRWLE 242
Query: 1204 QEATRFLMLIFKRAPGKR 1221
            +EA   L+ +F R P KR
Sbjct: 243  KEAKDLLVKLFVREPEKR 260

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E++I + L H N
Sbjct: 14  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 133
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            H  + P +LL+   G   L + DFG       SRR T  G L+ L
Sbjct: 134 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 177

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R T
Sbjct: 112  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 169
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 170  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 220
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
             ++    R E+ F +   E  R L+
Sbjct: 221  RIS----RVEFTFPDFVTEGARDLI 241

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 190  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 245
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 246  KHNPSQRPMLREVLEHPWI 264

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN---LVR 244
           +GRG  G VY   +  +G+ YA K +  K     Q ++L  NE  +++ +   +   +V 
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
           +  ++ T D  + I +L  GG+L + L++   ++E D+  Y  +++ GL++MH   + + 
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
            L P ++L+   G  H+ ++D GL+     F K  P
Sbjct: 317 DLKPANILLDEHG--HVRISDLGLA---CDFSKKKP 347

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN---LVR 244
           +GRG  G VY   +  +G+ YA K +  K     Q ++L  NE  +++ +   +   +V 
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
           +  ++ T D  + I +L  GG+L + L++   ++E D+  Y  +++ GL++MH   + + 
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
            L P ++L+   G  H+ ++D GL+     F K  P
Sbjct: 317 DLKPANILLDEHG--HVRISDLGLA---CDFSKKKP 347

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   + E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN---LVR 244
           +GRG  G VY   +  +G+ YA K +  K     Q ++L  NE  +++ +   +   +V 
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
           +  ++ T D  + I +L  GG+L + L++   ++E D+  Y  +++ GL++MH   + + 
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 315
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
            L P ++L+   G  H+ ++D GL+     F K  P
Sbjct: 316 DLKPANILLDEHG--HVRISDLGLA---CDFSKKKP 346

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GG+L + L++   ++E D+  Y  +++ GL++MH   + +  L P ++L+   G  H+ +
Sbjct: 275 GGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRI 332
Query: 524 TDFGLSRRITSFGKLNP 540
           +D GL+     F K  P
Sbjct: 333 SDLGLA---CDFSKKKP 346

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN---LVR 244
           +GRG  G VY   +  +G+ YA K +  K     Q ++L  NE  +++ +   +   +V 
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
           +  ++ T D  + I +L  GG+L + L++   ++E D+  Y  +++ GL++MH   + + 
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
            L P ++L+   G  H+ ++D GL+     F K  P
Sbjct: 317 DLKPANILLDEHG--HVRISDLGLA---CDFSKKKP 347

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GG+L + L++   ++E D+  Y  +++ GL++MH   + +  L P ++L+   G  H+ +
Sbjct: 276 GGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRI 333
Query: 524 TDFGLSRRITSFGKLNP 540
           +D GL+     F K  P
Sbjct: 334 SDLGLA---CDFSKKKP 347

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
           +D Y+   ++G G  G+     ++ S    A K +  +G +  +  K E+     L H N
Sbjct: 18  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIAANVKREIINHRSLRHPN 76
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +VR  +   T     I+ E A GGEL   +     ++E +   + +QL+SG+ Y H + +
Sbjct: 77  IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            H  L   + L+       L + DFG S+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSK 165

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH--PINT-P 1011
            ++ G+ Y H   +CH +++ +N ++    + ++K+ D G ++      +++H  P +T  
Sbjct: 124  LISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTVG 178
Query: 1012 NPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPE 1056
             P + APEVL ++    +  DVWS GV  YV+L GA PF    EP+
Sbjct: 179  TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPK 224

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 1127 GWSEKGIPSALFKTKEQAPEVLAEEPIFPQ------TDVWSAGVLAYVLLSGASPFRGQS 1180
            G+S+  +  +  K+    P  +A E +  +       DVWS GV  YV+L GA PF    
Sbjct: 162  GYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
Query: 1181 EPETRQNVNFVRYRFEYLFKE---LTQEATRFLMLIFKRAPGKRPTVEECHENRWL---V 1234
            EP+  +         +Y   +   ++ E    +  IF   P KR ++ E   + W    +
Sbjct: 222  EPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 281
Query: 1235 PSEYM 1239
            P++ M
Sbjct: 282  PADLM 286

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +L++   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLIIDQQG--YIQVTDFGFAKRV 191

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLIIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
           K R   + D ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E+
Sbjct: 2   KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
           +I + L H N++RL+  +       +I E A  G +   L + S + E   A YI +L +
Sbjct: 61  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            L Y H   + H  + P +LL+   G   L + DFG       SRR T  G L+ L
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRDTLCGTLDYL 174

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R T
Sbjct: 109  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRDT 166
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 167  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
             ++    R E+ F +   E  R L+  + KH
Sbjct: 218  RIS----RVEFTFPDFVTEGARDLISRLLKH 244

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 187  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 242
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 243  KHNPSQRPMLREVLEHPWI 261

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   + E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--------FKNE 230
           K + D Y     LG G  G V  A ER + +  A ++++ +     S          + E
Sbjct: 145 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 204
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           ++I+ +L H  ++++ + ++ +D + I+ EL  GGEL   +       E     Y  Q+L
Sbjct: 205 IEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 263
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSR 330
             + Y+H   I H  L P ++L++      L+ +TDFG S+
Sbjct: 264 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 304

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 947  KDAYC---VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLG 1002
            K+A C      +L  +QYLH  G+ H +++P+NV+++S      +K+ D G ++ + +  
Sbjct: 251  KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 310
Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFP---QTDVWSAGVLAYVLLSGASPF 1049
             +     TP   + APEVL            D WS GV+ ++ LSG  PF
Sbjct: 311  LMRTLCGTPT--YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   + E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 63.5 bits (153), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
           +D Y+   ++G G  G+     ++ +    A K +  +G +     K E+     L H N
Sbjct: 18  SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIE-RGEKIDENVKREIINHRSLRHPN 76
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +VR  +   T     I+ E A GGEL   +     ++E +   + +QL+SG+ Y H + +
Sbjct: 77  IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQV 136
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           AH  L   + L+       L + DFG S+
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSK 165

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +    ++ G+ Y H   + H +++ +N ++    + ++K+ D G ++           + 
Sbjct: 119  FFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVG 178
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPET 1057
            TP   + APEVL ++    +  DVWS GV  YV+L GA PF    EP+ 
Sbjct: 179  TP--AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 1127 GWSEKGIPSALFKTKEQAPEVLAEEPIFPQ------TDVWSAGVLAYVLLSGASPFRGQS 1180
            G+S+  +  +  K+    P  +A E +  +       DVWS GV  YV+L GA PF    
Sbjct: 162  GYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
Query: 1181 EPETRQNVNFVRYRFEYLFKE---LTQEATRFLMLIFKRAPGKRPTVEECHENRWL---V 1234
            EP+  +         +Y   +   ++ E    +  IF   P KR ++ E   + W    +
Sbjct: 222  EPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 281
Query: 1235 PSEYM 1239
            P++ M
Sbjct: 282  PADLM 286

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 63.5 bits (153), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNPEFA 1016
            GL +LH RG+ + +++ DNV++ S     +K+ D G C + +    T      TP+  + 
Sbjct: 132  GLFFLHKRGIIYRDLKLDNVMLDS--EGHIKIADFGMCKEHMMDGVTTREFCGTPD--YI 187
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            APE++A +P     D W+ GVL Y +L+G  PF G+ E E  Q++
Sbjct: 188  APEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI 232

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE++A +P     D W+ GVL Y +L+G  PF G+ E E  Q++  + +   Y  K L+
Sbjct: 188  APEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI--MEHNVSYP-KSLS 244
Query: 1204 QEATRFLMLIFKRAPGKR 1221
            +EA      +  + P KR
Sbjct: 245  KEAVSICKGLMTKHPAKR 262

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           ++ G  LG+G  G VY A E++S    A KV+     +   +    + E++I + L H N
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 70  ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKV 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            H  + P +LL+   G   L + DFG       SRR    G L+ L
Sbjct: 130 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRAALCGTLDYL 173

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R  
Sbjct: 108  QRTATYITELANALSYCHSKKVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRAA 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  +T +
Sbjct: 166  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
             ++    R E+ F +   E  R L+
Sbjct: 217  RIS----RVEFTFPDFVTEGARDLI 237

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 1126 IGWSEKGIPS---ALFKTKEQAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1181
             GWS     S   AL  T +  P  + E  +   + D+WS GVL Y  L G  PF   + 
Sbjct: 152  FGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 1182 PETRQNVNFVRYRFEYLFKELTQEATRFLM-LIFKRAPGKRPTVEECHENRWL 1233
             +T + ++    R E+ F +   E  R L+  + K  P +RP + E  E+ W+
Sbjct: 212  QDTYKRIS----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D +D    LG G  G V     + SG +YA K++      K  Q +    NE  I+  + 
Sbjct: 62  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 120
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   + E     Y  Q++   +Y+H 
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 180
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 181 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 212

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 163  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 217
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 218  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 275
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 276  VRFPSHFSSDLKDLLRNLLQV 296

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 3   PFVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 112  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 172  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++  +QY H + + H +++ +N+++ +     +K+ D G +   T  G  +       P
Sbjct: 121  QIVSAVQYCHQKFIVHRDLKAENLLLDA--DXNIKIADFGFSNEFT-FGNKLDAF-CGAP 176
Query: 1014 EFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
             +AAPE+   ++   P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR  +
Sbjct: 177  PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 234

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 1155 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLI 1213
            P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR   Y   +      +FL+L 
Sbjct: 192  PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFLIL- 250
Query: 1214 FKRAPGKRPTVEECHENRW 1232
                P KR T+E+  ++RW
Sbjct: 251  ---NPSKRGTLEQIXKDRW 266

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
           K R   + D ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E+
Sbjct: 3   KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
           +I + L H N++RL+  +       +I E A  G +   L + S + E   A YI +L +
Sbjct: 62  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 121
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            L Y H   + H  + P +LL+   G   L + DFG S
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWS 157

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R  
Sbjct: 110  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRXX 167
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 168  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 218
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
             ++    R E+ F +   E  R L+  + KH
Sbjct: 219  RIS----RVEFTFPDFVTEGARDLISRLLKH 245

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 188  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 243
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 244  KHNPSQRPMLREVLEHPWI 262

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---F 227
           G  +  + +   + ++ G  LG+G  G VY A E+ S    A KV+     +   +    
Sbjct: 1   GSHMSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 228 KNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIR 287
           + E++I + L H N++RL+  +       +I E A  G +   L + S + E   A YI 
Sbjct: 61  RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 120
Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           +L + L Y H   + H  + P +LL+   G   L + DFG S
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWS 160

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R  
Sbjct: 113  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTD 170
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 171  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
             ++    R E+ F +   E  R L+
Sbjct: 222  RIS----RVEFTFPDFVTEGARDLI 242

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 191  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 246
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 247  KHNPSQRPMLREVLEHPWI 265

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
           K R   + D ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E+
Sbjct: 3   KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
           +I + L H N++RL+  +       +I E A  G +   L + S + E   A YI +L +
Sbjct: 62  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 121
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            L Y H   + H  + P +LL+   G   L + +FG       SRR T  G L+ L
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIANFGWSVHAPSSRRTTLCGTLDYL 175

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 22/151 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ + G       ++R T
Sbjct: 110  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIANFGWSVHAPSSRRTT 167
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 168  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 218
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
             ++    R E+ F +   E  R L+  + KH
Sbjct: 219  RIS----RVEFTFPDFVTEGARDLISRLLKH 245

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 188  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 243
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 244  KHNPSQRPMLREVLEHPWI 262

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 947  KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLI 1005
            +  +    ++ GLQ+LH +G+ + +++ DN+++   +   +K+ D G C + +  LG   
Sbjct: 120  RATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD--KDGHIKIADFGMCKENM--LGDAK 175
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                   P++ APE+L  +      D WS GVL Y +L G SPF GQ E E   +   +R
Sbjct: 176  TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS---IR 232
Query: 1066 YRFEYLFKELTQEATRFLMLIFKHE 1090
                +  + L +EA   L+ +F  E
Sbjct: 233  MDNPFYPRWLEKEAKDLLVKLFVRE 257

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE+L  +      D WS GVL Y +L G SPF GQ E E   +   +R    +  + L 
Sbjct: 187  APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS---IRMDNPFYPRWLE 243
Query: 1204 QEATRFLMLIFKRAPGKR 1221
            +EA   L+ +F R P KR
Sbjct: 244  KEAKDLLVKLFVREPEKR 261

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E++I + L H N
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            H  + P +LL+   G   L + DFG S
Sbjct: 130 IHRDIKPENLLLGSAG--ELKIADFGWS 155

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R  
Sbjct: 108  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTE 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 166  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
             ++    R E+ F +   E  R L+  + KH
Sbjct: 217  RIS----RVEFTFPDFVTEGARDLISRLLKH 243

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 186  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 241
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 242  KHNPSQRPMLREVLEHPWI 260

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
           K R   + D ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E+
Sbjct: 1   KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
           +I + L H N++RL+  +       +I E A  G +   L + S + E   A YI +L +
Sbjct: 60  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            L Y H   + H  + P +LL+   G   L + DFG S
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWS 155

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R  
Sbjct: 108  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTD 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 166  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
             ++    R E+ F +   E  R L+
Sbjct: 217  RIS----RVEFTFPDFVTEGARDLI 237

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 186  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 241
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 242  KHNPSQRPMLREVLEHPWI 260

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
           K R   + D ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E+
Sbjct: 2   KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
           +I + L H N++RL+  +       +I E A  G +   L + S + E   A YI +L +
Sbjct: 61  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            L Y H   + H  + P +LL+   G   L + DFG S
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWS 156

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R  
Sbjct: 109  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTD 166
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 167  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
             ++    R E+ F +   E  R L+  + KH
Sbjct: 218  RIS----RVEFTFPDFVTEGARDLISRLLKH 244

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 187  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 242
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 243  KHNPSQRPMLREVLEHPWI 261

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
           +D Y+   ++G G  G+     ++ S    A K +  +G +     K E+     L H N
Sbjct: 17  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPN 75
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +VR  +   T     I+ E A GGEL   +     ++E +   + +QL+SG+ Y H + +
Sbjct: 76  IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 135
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            H  L   + L+       L + DFG S+
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSK 164

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH--PINTPN 1012
            ++ G+ Y H   +CH +++ +N ++    + ++K+ D G ++      +++H  P +T  
Sbjct: 123  LISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTVG 177
Query: 1013 -PEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
             P + APEVL ++    +  DVWS GV  YV+L GA PF    EP+  +         +Y
Sbjct: 178  TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY 237
Query: 1071 LFKE---LTQEATRFLMLIFKHE-VDWITLANNIDHEFWHVK----DLKRETNYTFRLSA 1122
               +   ++ E    +  IF  +    I++    +HE W +K    DL  +   T + +A
Sbjct: 238  AIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHE-WFLKNLPADLMNDNTMTTQFAA 296
Query: 1123 KNVIGWS 1129
             +  G S
Sbjct: 297  SDQPGQS 303

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 1127 GWSEKGIPSALFKTKEQAPEVLAEEPIFPQ------TDVWSAGVLAYVLLSGASPFRGQS 1180
            G+S+  +  +  K+    P  +A E +  +       DVWS GV  YV+L GA PF    
Sbjct: 161  GYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220
Query: 1181 EPETRQNVNFVRYRFEYLFKE---LTQEATRFLMLIFKRAPGKRPTVEECHENRWL---V 1234
            EP+  +         +Y   +   ++ E    +  IF   P KR ++ E   + W    +
Sbjct: 221  EPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 280
Query: 1235 PSEYM 1239
            P++ M
Sbjct: 281  PADLM 285

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 3   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 112  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 172  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
           K R   + D ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E+
Sbjct: 4   KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
           +I + L H N++RL+  +       +I E A  G +   L + S + E   A YI +L +
Sbjct: 63  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            L Y H   + H  + P +LL+   G   L + +FG       SRR T  G L+ L
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIANFGWSVHAPSSRRTTLCGTLDYL 176

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ + G       ++R T
Sbjct: 111  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIANFGWSVHAPSSRRTT 168
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 169  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
             ++    R E+ F +   E  R L+
Sbjct: 220  RIS----RVEFTFPDFVTEGARDLI 240

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 189  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 244
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 245  KHNPSQRPMLREVLEHPWI 263

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 3   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 112  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 172  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 12  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 70
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 71  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 130
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 131 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 161

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 114  FYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQITDFGTAKVLSPESKQARANX 171
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y
Sbjct: 172  FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 229
Query: 1067 RF-EYLFKELTQEATRFLML 1085
             F E  F +      + L+L
Sbjct: 230  DFPEKFFPKARDLVEKLLVL 249

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E++I + L H N
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            H  + P +LL+   G   L + DFG       SRR    G L+ L
Sbjct: 130 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRAALCGTLDYL 173

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R  
Sbjct: 108  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRAA 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 166  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
             ++    R E+ F +   E  R L+
Sbjct: 217  RIS----RVEFTFPDFVTEGARDLI 237

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 1126 IGWSEKGIPS---ALFKTKEQAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1181
             GWS     S   AL  T +  P  + E  +   + D+WS GVL Y  L G  PF   + 
Sbjct: 152  FGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 1182 PETRQNVNFVRYRFEYLFKELTQEATRFLM-LIFKRAPGKRPTVEECHENRWL 1233
             ET + ++    R E+ F +   E  R L+  + K  P +RP + E  E+ W+
Sbjct: 212  QETYKRIS----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E++I + L H N
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            H  + P +LL+   G   L + DFG S
Sbjct: 130 IHRDIKPENLLLGSAG--ELKIADFGWS 155

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R  
Sbjct: 108  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTD 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 166  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
             ++    R E+ F +   E  R L+
Sbjct: 217  RIS----RVEFTFPDFVTEGARDLI 237

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 186  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 241
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 242  KHNPSQRPMLREVLEHPWI 260

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 11  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 69
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 70  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 129
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 130 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 160

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 113  FYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQITDFGTAKVLSPESKQARANX 170
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y
Sbjct: 171  FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 228
Query: 1067 RF-EYLFKELTQEATRFLML 1085
             F E  F +      + L+L
Sbjct: 229  DFPEKFFPKARDLVEKLLVL 248

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E++I + L H N
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            H  + P +LL+   G   L + DFG       SRR    G L+ L
Sbjct: 133 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRAALCGTLDYL 176

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R  
Sbjct: 111  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRAA 168
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 169  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM-LIFKH 1089
             ++    R E+ F +   E  R L+  + KH
Sbjct: 220  RIS----RVEFTFPDFVTEGARDLISRLLKH 246

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 1126 IGWSEKGIPS---ALFKTKEQAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1181
             GWS     S   AL  T +  P  + E  +   + D+WS GVL Y  L G  PF   + 
Sbjct: 155  FGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 1182 PETRQNVNFVRYRFEYLFKELTQEATRFLM-LIFKRAPGKRPTVEECHENRWL 1233
             ET + ++    R E+ F +   E  R L+  + K  P +RP + E  E+ W+
Sbjct: 215  QETYKRIS----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL-----FKNELDIMNQLCH 239
           Y  GD LG G  G V       +G   A K++  +  + +SL      + E+  +    H
Sbjct: 18  YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQ--KIRSLDVVGKIRREIQNLKLFRH 75
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            ++++L+    T     ++ E   GGEL   + +     E +     +Q+LSG+DY HR 
Sbjct: 76  PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 300 SIAHLGLTPGDLLV-AHPGGRHLLLTDFGLSRRIT 333
            + H  L P ++L+ AH   +   + DFGLS  ++
Sbjct: 136 MVVHRDLKPENVLLDAHMNAK---IADFGLSNMMS 167

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            +L G+ Y H   + H +++P+NV++ +   +  K+ D G +  ++    L     +PN  
Sbjct: 125  ILSGVDYCHRHMVVHRDLKPENVLLDA--HMNAKIADFGLSNMMSDGEFLRXSCGSPN-- 180
Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
            +AAPEV++      P+ D+WS+GV+ Y LL G  PF     P
Sbjct: 181  YAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP 222

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV-NFVRYRFEYLFKE 1201
            APEV++      P+ D+WS+GV+ Y LL G  PF     P   + + + + Y  +Y    
Sbjct: 183  APEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQY---- 238
Query: 1202 LTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            L       L  + +  P KR T+++  E+ W 
Sbjct: 239  LNPSVISLLKHMLQVDPMKRATIKDIREHEWF 270

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 4   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 113  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 172
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 173  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           ++ G  LG+G  G VY A E+      A KV+     +   +    + E++I + L H N
Sbjct: 7   FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 67  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 126
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGL------SRRITSFGKLNPL 341
            H  + P +LL+   G   L + DFG       SRR T  G L+ L
Sbjct: 127 IHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTTLCGTLDYL 170

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R T
Sbjct: 105  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTT 162
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 163  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 213
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
             ++    R E+ F +   E  R L+
Sbjct: 214  RIS----RVEFTFPDFVTEGARDLI 234

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 183  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 238
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 239  KHNPSQRPMLREVLEHPWI 257

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E++I + L H N
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            H  + P +LL+   G   L + DFG S
Sbjct: 130 IHRDIKPENLLLGSAG--ELKIADFGWS 155

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R  
Sbjct: 108  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRXX 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 166  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
             ++    R E+ F +   E  R L+
Sbjct: 217  RIS----RVEFTFPDFVTEGARDLI 237

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 186  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 241
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 242  KHNPSQRPMLREVLEHPWI 260

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNEL 231
           K R   + D ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E+
Sbjct: 4   KKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
           +I + L H N++RL+  +       +I E A  G +   L + S + E   A YI +L +
Sbjct: 63  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            L Y H   + H  + P +LL+   G   L + DFG S
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWS 158

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R  
Sbjct: 111  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRXX 168
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 169  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
             ++    R E+ F +   E  R L+
Sbjct: 220  RIS----RVEFTFPDFVTEGARDLI 240

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 189  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 244
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 245  KHNPSQRPMLREVLEHPWI 263

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 3   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 112  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 172  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 3   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 112  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 172  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E++I + L H N
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            H  + P +LL+   G   L + DFG S
Sbjct: 130 IHRDIKPENLLLGSAG--ELKIADFGWS 155

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R  
Sbjct: 108  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTX 165
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 166  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
             ++    R E+ F +   E  R L+
Sbjct: 217  RIS----RVEFTFPDFVTEGARDLI 237

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 186  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 241
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 242  KHNPSQRPMLREVLEHPWI 260

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 9   FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 67
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 68  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 127
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 128 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 158

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 111  FYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQITDFGTAKVLSPESKQARANX 168
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y
Sbjct: 169  FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 226
Query: 1067 RF-EYLFKELTQEATRFLML 1085
             F E  F +      + L+L
Sbjct: 227  DFPEKFFPKARDLVEKLLVL 246

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 10  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 68
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 129 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 159

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 112  FYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQITDFGTAKVLSPESKQARANX 169
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y
Sbjct: 170  FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 227
Query: 1067 RF-EYLFKELTQEATRFLML 1085
             F E  F +      + L+L
Sbjct: 228  DFPEKFFPKARDLVEKLLVL 247

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-H 239
            +D Y   + +G G        V +++   YA KV+    ++ K     E++I+ +   H
Sbjct: 25  FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI----DKSKRDPSEEIEILLRYGQH 80
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            N++ L D Y+      +++EL  GGELL  + RQ +++E + +  +  +   ++Y+H  
Sbjct: 81  PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 300 SIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRRI 332
            + H  L P ++L     G    L + DFG ++++
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNV--VMASVRSVQVKLIDLGCTQRV-TKLGTLI 1005
            ++ + ++   ++YLH +G+ H +++P N+  V  S     +++ D G  +++  + G L+
Sbjct: 124  SFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLM 183
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
             P  T N  F APEVL  +      D+WS G+L Y +L+G +PF
Sbjct: 184  TPCYTAN--FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 3   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 112  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 172  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 2   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 61
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 62  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 122 IGITHRDIKPENLLLDERD--NLKISDFGLA 150

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 111  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 170
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 171  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 211

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 4   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 113  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 173  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-H 239
            +D Y   + +G G        V +++   YA KV+    ++ K     E++I+ +   H
Sbjct: 25  FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI----DKSKRDPSEEIEILLRYGQH 80
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            N++ L D Y+      +++EL  GGELL  + RQ +++E + +  +  +   ++Y+H  
Sbjct: 81  PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 300 SIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRRI 332
            + H  L P ++L     G    L + DFG ++++
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMA--SVRSVQVKLIDLGCTQRV-TKLGTLI 1005
            ++ + ++   ++YLH +G+ H +++P N++    S     +++ D G  +++  + G L+
Sbjct: 124  SFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLM 183
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
             P  T N  F APEVL  +      D+WS G+L Y +L+G +PF
Sbjct: 184  TPCYTAN--FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCHRN 241
           ++ G  LG+G  G VY A E+ S    A KV+     +   +    + E++I + L H N
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   +
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            H  + P +LL+   G   L + DFG S
Sbjct: 133 IHRDIKPENLLLGSAG--ELKIADFGWS 158

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVT 999
             + A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R  
Sbjct: 111  QRTATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRDD 168
Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GTL         ++  PE++       + D+WS GVL Y  L G  PF   +  ET +
Sbjct: 169  LCGTL---------DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 1060 NVNFVRYRFEYLFKELTQEATRFLM 1084
             ++    R E+ F +   E  R L+
Sbjct: 220  RIS----RVEFTFPDFVTEGARDLI 240

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1156 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLM-LIF 1214
            + D+WS GVL Y  L G  PF   +  ET + ++    R E+ F +   E  R L+  + 
Sbjct: 189  KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS----RVEFTFPDFVTEGARDLISRLL 244
Query: 1215 KRAPGKRPTVEECHENRWL 1233
            K  P +RP + E  E+ W+
Sbjct: 245  KHNPSQRPMLREVLEHPWI 263

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL-----FKNELDIMNQLCH 239
           Y  GD LG G  G V     + +G   A K++  +  + +SL      K E+  +    H
Sbjct: 13  YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ--KIRSLDVVGKIKREIQNLKLFRH 70
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            ++++L+    T   F ++ E   GGEL   + +     E +     +Q+LS +DY HR 
Sbjct: 71  PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 300 SIAHLGLTPGDLLV-AHPGGRHLLLTDFGLSRRIT 333
            + H  L P ++L+ AH   +   + DFGLS  ++
Sbjct: 131 MVVHRDLKPENVLLDAHMNAK---IADFGLSNMMS 162

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             +L  + Y H   + H +++P+NV++ +   +  K+ D G +  ++    L     +PN 
Sbjct: 119  QILSAVDYCHRHMVVHRDLKPENVLLDA--HMNAKIADFGLSNMMSDGEFLRTSCGSPN- 175
Query: 1014 EFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV-NFVRYRFEYL 1071
             +AAPEV++      P+ D+WS GV+ Y LL G  PF  +  P   + +   V Y  EYL
Sbjct: 176  -YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYL 234
Query: 1072 FKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDL 1110
             + +   AT  + ++    +   T+ +  +HE W  +DL
Sbjct: 235  NRSV---ATLLMHMLQVDPLKRATIKDIREHE-WFKQDL 269

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APEV++      P+ D+WS GV+ Y LL G  PF  +  P   +    +R    Y+ + L
Sbjct: 178  APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK---IRGGVFYIPEYL 234
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
             +     LM + +  P KR T+++  E+ W 
Sbjct: 235  NRSVATLLMHMLQVDPLKRATIKDIREHEWF 265

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
           + ++   ELG G  G VY A  + +G   AAKV+  K  +    +  E++I+    H  +
Sbjct: 19  EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 78
Query: 243 VRLHDSYETKDSFTIISELAGGG---ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           V+L  +Y       I+ E   GG    ++  L R    TE  I    RQ+L  L+++H  
Sbjct: 79  VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQVVCRQMLEALNFLHSK 136
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
            I H  L  G++L+   G   + L DFG+S +
Sbjct: 137 RIIHRDLKAGNVLMTLEGD--IRLADFGVSAK 166

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 3   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDE--RDNLKISDFGLA 151

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 112  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 172  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 3   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDE--RDNLKISDFGLA 151

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 112  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 172  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
           + ++   ELG G  G VY A  + +G   AAKV+  K  +    +  E++I+    H  +
Sbjct: 11  EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 70
Query: 243 VRLHDSYETKDSFTIISELAGGG---ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           V+L  +Y       I+ E   GG    ++  L R    TE  I    RQ+L  L+++H  
Sbjct: 71  VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQVVCRQMLEALNFLHSK 128
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
            I H  L  G++L+   G   + L DFG+S +
Sbjct: 129 RIIHRDLKAGNVLMTLEG--DIRLADFGVSAK 158

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL-----FKNELDIMNQLCH 239
           Y  GD LG G  G V     + +G   A K++  +  + +SL      K E+  +    H
Sbjct: 13  YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ--KIRSLDVVGKIKREIQNLKLFRH 70
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            ++++L+    T   F ++ E   GGEL   + +     E +     +Q+LS +DY HR 
Sbjct: 71  PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 300 SIAHLGLTPGDLLV-AHPGGRHLLLTDFGLSRRIT 333
            + H  L P ++L+ AH   +   + DFGLS  ++
Sbjct: 131 MVVHRDLKPENVLLDAHMNAK---IADFGLSNMMS 162

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             +L  + Y H   + H +++P+NV++ +   +  K+ D G +  ++    L     +PN 
Sbjct: 119  QILSAVDYCHRHMVVHRDLKPENVLLDA--HMNAKIADFGLSNMMSDGEFLRDSCGSPN- 175
Query: 1014 EFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV-NFVRYRFEYL 1071
             +AAPEV++      P+ D+WS GV+ Y LL G  PF  +  P   + +   V Y  EYL
Sbjct: 176  -YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYL 234
Query: 1072 FKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDL 1110
             + +   AT  + ++    +   T+ +  +HE W  +DL
Sbjct: 235  NRSV---ATLLMHMLQVDPLKRATIKDIREHE-WFKQDL 269

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APEV++      P+ D+WS GV+ Y LL G  PF  +  P   +    +R    Y+ + L
Sbjct: 178  APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK---IRGGVFYIPEYL 234
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
             +     LM + +  P KR T+++  E+ W 
Sbjct: 235  NRSVATLLMHMLQVDPLKRATIKDIREHEWF 265

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 3   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDE--RDNLKISDFGLA 151

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 112  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 172  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 4   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 113  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 173  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 4   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 113  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 173  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 4   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 113  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 173  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 3   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDE--RDNLKISDFGLA 151

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P 
Sbjct: 113  LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP- 171
Query: 1015 FAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
            + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 172  YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 4   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P 
Sbjct: 114  LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP- 172
Query: 1015 FAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
            + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 173  YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 3   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 112  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 172  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 3   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 123 IGITHRDIKPENLLLDERD--NLKISDFGLA 151

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 112  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 172  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN 241
           Y     LG G  G V  A   ++G+  A K++  K    +  +   + E+  +  L H +
Sbjct: 6   YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +++L+D  ++KD   ++ E AG  EL   + ++   +E +   + +Q++S ++Y HR  I
Sbjct: 66  IIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 302 AHLGLTPGDLLVAHPGGRHL--LLTDFGLSRRIT 333
            H  L P +LL+      HL   + DFGLS  +T
Sbjct: 125 VHRDLKPENLLL----DEHLNVKIADFGLSNIMT 154

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            ++  ++Y H   + H +++P+N+++     + VK+ D G +  +T    L     +PN  
Sbjct: 112  IISAVEYCHRHKIVHRDLKPENLLLDE--HLNVKIADFGLSNIMTDGNFLKTSCGSPN-- 167
Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
            +AAPEV++ +    P+ DVWS GV+ YV+L    PF  +S P   +N++
Sbjct: 168  YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS 216

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 4   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 113  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 173  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNPEFA 1016
            GL +L  +G+ + +++ DNV++ S     +K+ D G C + +    T      TP+  + 
Sbjct: 133  GLFFLQSKGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIWDGVTTKXFCGTPD--YI 188
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            APE++A +P     D W+ GVL Y +L+G +PF G+ E E  Q++
Sbjct: 189  APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 233

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE++A +P     D W+ GVL Y +L+G +PF G+ E E  Q++  + +   Y  K ++
Sbjct: 189  APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI--MEHNVAYP-KSMS 245
Query: 1204 QEATRFLMLIFKRAPGKR 1221
            +EA      +  + PGKR
Sbjct: 246  KEAVAICKGLMTKHPGKR 263

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 92
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 153 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 183

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 136  FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y
Sbjct: 194  FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 251
Query: 1067 RF-EYLFKELTQEATRFLML 1085
             F E  F +      + L+L
Sbjct: 252  DFPEKFFPKARDLVEKLLVL 271

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V     + +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E A GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +L++   G  ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLMIDQQG--YIKVTDFGFAKRV 192

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++   +   +K+ D G  +RV   G   
Sbjct: 143  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 198  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 256  VRFPSHFSSDLKDLLRNLLQV 276

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN 241
           Y     LG G  G V  A   ++G+  A K++  K    +  +   + E+  +  L H +
Sbjct: 10  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +++L+D  ++KD   ++ E AG  EL   + ++   +E +   + +Q++S ++Y HR  I
Sbjct: 70  IIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 302 AHLGLTPGDLLVAHPGGRHL--LLTDFGLSRRIT 333
            H  L P +LL+      HL   + DFGLS  +T
Sbjct: 129 VHRDLKPENLLL----DEHLNVKIADFGLSNIMT 158

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            ++  ++Y H   + H +++P+N+++     + VK+ D G +  +T    L     +PN  
Sbjct: 116  IISAVEYCHRHKIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPN-- 171
Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
            +AAPEV++ +    P+ DVWS GV+ YV+L    PF  +S P   +N++
Sbjct: 172  YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS 220

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN 241
           Y     LG G  G V  A   ++G+  A K++  K    +  +   + E+  +  L H +
Sbjct: 16  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +++L+D  ++KD   ++ E AG  EL   + ++   +E +   + +Q++S ++Y HR  I
Sbjct: 76  IIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 302 AHLGLTPGDLLVAHPGGRHL--LLTDFGLSRRIT 333
            H  L P +LL+      HL   + DFGLS  +T
Sbjct: 135 VHRDLKPENLLL----DEHLNVKIADFGLSNIMT 164

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 60.1 bits (144), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            ++  ++Y H   + H +++P+N+++     + VK+ D G +  +T    L     +PN  
Sbjct: 122  IISAVEYCHRHKIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPN-- 177
Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
            +AAPEV++ +    P+ DVWS GV+ YV+L    PF  +S P   +N++
Sbjct: 178  YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS 226

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 93
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 94  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 154 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 184

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G T +V    +     N
Sbjct: 137  FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFG-TAKVLSPESKQARAN 193
Query: 1010 T--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            +     ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y 
Sbjct: 194  SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 253
Query: 1068 F-EYLFKELTQEATRFLML 1085
            F E  F +      + L+L
Sbjct: 254  FPEKFFPKARDLVEKLLVL 272

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 93
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 94  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 154 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 184

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 137  FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 194
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y
Sbjct: 195  FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 252
Query: 1067 RF-EYLFKELTQEATRFLML 1085
             F E  F +      + L+L
Sbjct: 253  DFPEKFFPKARDLVEKLLVL 272

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRN 241
           Y     LG G  G V  A   ++G+  A K++  K    +  +   + E+  +  L H +
Sbjct: 15  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +++L+D  ++KD   ++ E AG  EL   + ++   +E +   + +Q++S ++Y HR  I
Sbjct: 75  IIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 302 AHLGLTPGDLLVAHPGGRHL--LLTDFGLSRRIT 333
            H  L P +LL+      HL   + DFGLS  +T
Sbjct: 134 VHRDLKPENLLL----DEHLNVKIADFGLSNIMT 163

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 60.1 bits (144), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            ++  ++Y H   + H +++P+N+++     + VK+ D G +  +T    L     +PN  
Sbjct: 121  IISAVEYCHRHKIVHRDLKPENLLLD--EHLNVKIADFGLSNIMTDGNFLKTSCGSPN-- 176
Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
            +AAPEV++ +    P+ DVWS GV+ YV+L    PF  +S P   +N++
Sbjct: 177  YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS 225

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 90
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 151 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 181

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G T +V    +     N
Sbjct: 134  FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFG-TAKVLSPESKQARAN 190
Query: 1010 --TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
                  ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y 
Sbjct: 191  AFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 250
Query: 1068 F-EYLFKELTQEATRFLML 1085
            F E  F +      + L+L
Sbjct: 251  FPEKFFPKARDLVEKLLVL 269

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 7/171 (4%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
             +    +L+GL+YLH   + H +I+ DNV++ +   V +K+ D G ++R+  +       
Sbjct: 125  GFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGV-LKISDFGTSKRLAGINPCTETF 183
Query: 1009 NTPNPEFAAPEVLAEEP--IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ-NVNFVR 1065
             T   ++ APE++ + P       D+WS G     + +G  PF    EP+     V   +
Sbjct: 184  -TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK 242
Query: 1066 YRFEYLFKELTQEATRFLMLIFKHEVDWITLANN-IDHEFWHVKDLKRETN 1115
               E + + ++ EA  F++  F+ + D    AN+ +  EF  V   K++T 
Sbjct: 243  VHPE-IPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQ 292

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 90
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 151 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 181

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 134  FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 191
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y
Sbjct: 192  FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 249
Query: 1067 RF-EYLFKELTQEATRFLML 1085
             F E  F +      + L+L
Sbjct: 250  DFPEKFFPKARDLVEKLLVL 269

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 90
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 151 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 181

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 134  FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 191
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y
Sbjct: 192  FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 249
Query: 1067 RF-EYLFKELTQEATRFLML 1085
             F E  F +      + L+L
Sbjct: 250  DFPEKFFPKARDLVEKLLVL 269

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   +   E D+M++L H 
Sbjct: 16  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV-TRERDVMSRLDHP 74
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 75  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 135 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 165

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 118  FYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQITDFGTAKVLSPESKQARANX 175
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y
Sbjct: 176  FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 233
Query: 1067 RF-EYLFKELTQEATRFLML 1085
             F E  F +      + L+L
Sbjct: 234  DFPEKFFPKARDLVEKLLVL 253

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 92
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 153 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 183

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 136  FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y
Sbjct: 194  FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 251
Query: 1067 RF-EYLFKELTQEATRFLML 1085
             F E  F +      + L+L
Sbjct: 252  DFPEKFFPKARDLVEKLLVL 271

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 92
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 153 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 183

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 136  FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y
Sbjct: 194  FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 251
Query: 1067 RF-EYLFKELTQEATRFLML 1085
             F E  F +      + L+L
Sbjct: 252  DFPEKFFPKARDLVEKLLVL 271

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPNPEFA 1016
            GL +L  +G+ + +++ DNV++ S     +K+ D G C + +    T      TP+  + 
Sbjct: 454  GLFFLQSKGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIWDGVTTKXFCGTPD--YI 509
Query: 1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            APE++A +P     D W+ GVL Y +L+G +PF G+ E E  Q++
Sbjct: 510  APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 554

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE++A +P     D W+ GVL Y +L+G +PF G+ E E  Q++  + +   Y  K ++
Sbjct: 510  APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI--MEHNVAYP-KSMS 566
Query: 1204 QEATRFLMLIFKRAPGKR 1221
            +EA      +  + PGKR
Sbjct: 567  KEAVAICKGLMTKHPGKR 584

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++  K         K E+ I   L 
Sbjct: 4   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLN 63
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           + I H  + P +LL+      +L ++DFGL+
Sbjct: 124 IGITHRDIKPENLLLDE--RDNLKISDFGLA 152

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++ G+ YLH  G+ H +I+P+N+++    ++++    L    R      L++ +    P
Sbjct: 113  QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 1014 EFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSE 1054
             + APE+L       +  DVWS G++   +L+G  P+   S+
Sbjct: 173  -YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFK--NELDIMNQLCH 239
           D ++    LG G  G V       +G +YA K++   K  + K +    NE  I+  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
             LV+L  S++   +  ++ E A GGE+   L R   ++E     Y  Q++   +Y+H L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            + +  L P +L++   G  ++ +TDFGL++R+
Sbjct: 161 DLIYRDLKPENLMIDQQG--YIQVTDFGLAKRV 191

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMIDQQGYIQV--TDFGLAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 39  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 97
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+  ++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 98  FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 158 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 188

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G T +V    +     N
Sbjct: 141  FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFG-TAKVLSPESKQARAN 197
Query: 1010 --TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
                  ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y 
Sbjct: 198  XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 257
Query: 1068 F-EYLFKELTQEATRFLML 1085
            F E  F +      + L+L
Sbjct: 258  FPEKFFPKARDLVEKLLVL 276

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 92
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 153 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 183

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 136  FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E      +  + Y
Sbjct: 194  FVGTA--QYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY 251
Query: 1067 RF-EYLFKELTQEATRFLML 1085
             F E  F +      + L+L
Sbjct: 252  DFPEKFFPKARDLVEKLLVL 271

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFK--NELDIMNQLCH 239
           D ++    LG G  G V       +G +YA K++   K  + K +    NE  I+  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
             LV+L  S++   +  ++ E A GGE+   L R   ++E     Y  Q++   +Y+H L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            + +  L P +L++   G  ++ +TDFGL++R+
Sbjct: 161 DLIYRDLKPENLMIDQQG--YIKVTDFGLAKRV 191

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++   +   +K+ D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGLAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   +   E D+M++L H 
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV-TRERDVMSRLDHP 89
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 90  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 150 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 180

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 133  FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 190
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y
Sbjct: 191  FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 248
Query: 1067 RF 1068
             F
Sbjct: 249  DF 250

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 92
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 153 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 183

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 136  FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E      +  + Y
Sbjct: 194  FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY 251
Query: 1067 RF-EYLFKELTQEATRFLML 1085
             F E  F +      + L+L
Sbjct: 252  DFPEKFFPKARDLVEKLLVL 271

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 37  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 95
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 96  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 156 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 186

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 139  FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 196
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y
Sbjct: 197  FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 254
Query: 1067 RFEYLF 1072
             F   F
Sbjct: 255  DFPAAF 260

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   +   E D+M++L H 
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV-TRERDVMSRLDHP 89
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 90  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 150 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 180

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G T +V    +     N
Sbjct: 133  FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFG-TAKVLSPESKQARAN 189
Query: 1010 T--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            +     ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y 
Sbjct: 190  SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 249
Query: 1068 F 1068
            F
Sbjct: 250  F 250

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 191 LGRGVTGIVYHA---VERSSGRNYAAKV----MTGKGNQYKSLFKNELDIMNQLCHRNLV 243
           LG+G  G V+        ++G+ +A KV    M  +  +  +  K E +I+ ++ H  +V
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
            L  +++T     +I E   GGEL   L R+  + E     Y+ ++   L ++H+  I +
Sbjct: 85  DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIY 144
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSR 330
             L P ++++ H G  H+ LTDFGL +
Sbjct: 145 RDLKPENIMLNHQG--HVKLTDFGLCK 169

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 947  KDAYC--VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL 1004
            +D  C  +  +   L +LH +G+ + +++P+N+++       VKL D G  +     GT+
Sbjct: 120  EDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN--HQGHVKLTDFGLCKESIHDGTV 177
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFV 1064
             H       E+ APE+L         D WS G L Y +L+GA PF G++  +T   +   
Sbjct: 178  THTF-CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
Query: 1065 RYRFEYLFKELTQEATRFLMLIFK 1088
            +     L   LTQEA   L  + K
Sbjct: 237  KLN---LPPYLTQEARDLLKKLLK 257

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
             ++  ++Y H   + H +++P+N+++    ++ VK+ D G +  +T    L     +PN 
Sbjct: 116  QIICAIEYCHRHKIVHRDLKPENLLLDD--NLNVKIADFGLSNIMTDGNFLKTSCGSPN- 172
Query: 1014 EFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             +AAPEV+  +    P+ DVWS G++ YV+L G  PF  +  P   + VN   Y
Sbjct: 173  -YAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVY 225

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 1144 APEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APEV+  +    P+ DVWS G++ YV+L G  PF  +  P   + VN   Y         
Sbjct: 175  APEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPG 234
Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
             Q   R +++     P +R T++E   + W 
Sbjct: 235  AQSLIRRMIV---ADPMQRITIQEIRRDPWF 262

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 191 LGRGVTGIVYHA---VERSSGRNYAAKV----MTGKGNQYKSLFKNELDIMNQLCHRNLV 243
           LG+G  G V+        ++G+ +A KV    M  +  +  +  K E +I+ ++ H  +V
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
            L  +++T     +I E   GGEL   L R+  + E     Y+ ++   L ++H+  I +
Sbjct: 85  DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIY 144
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSR 330
             L P ++++ H G  H+ LTDFGL +
Sbjct: 145 RDLKPENIMLNHQG--HVKLTDFGLCK 169

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 947  KDAYC--VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL 1004
            +D  C  +  +   L +LH +G+ + +++P+N+++       VKL D G  +     GT+
Sbjct: 120  EDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN--HQGHVKLTDFGLCKESIHDGTV 177
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFV 1064
             H       E+ APE+L         D WS G L Y +L+GA PF G++  +T   +   
Sbjct: 178  THXF-CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
Query: 1065 RYRFEYLFKELTQEATRFLMLIFK 1088
            +     L   LTQEA   L  + K
Sbjct: 237  KLN---LPPYLTQEARDLLKKLLK 257

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V     + +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 34  DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 92
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 93  FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 153 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 184

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 135  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 189
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 190  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 247
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 248  VRFPSHFSSDLKDLLRNLLQV 268

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V     + +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 192

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 143  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 198  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 256  VRFPSHFSSDLKDLLRNLLQV 276

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V     + +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 192

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 143  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 198  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 256  VRFPSHFSSDLKDLLRNLLQV 276

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
           LG+G  GIVY   + S+    A K +  + ++Y      E+ +   L H+N+V+   S+ 
Sbjct: 16  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 251 TKDSFTIISELAGGGELLHSLTRQSYY----TEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
                 I  E   GG  L +L R  +      E  I  Y +Q+L GL Y+H   I H  +
Sbjct: 76  ENGFIKIFMEQVPGGS-LSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 134
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
              ++L+    G  L ++DFG S+R+     +NP
Sbjct: 135 KGDNVLINTYSGV-LKISDFGTSKRLAG---INP 164

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
             +    +L+GL+YLH   + H +I+ DNV++ +   V +K+ D G ++R+  +       
Sbjct: 111  GFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGV-LKISDFGTSKRLAGINPCTETF 169
Query: 1009 NTPNPEFAAPEVLAEEP--IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ-NVNFVR 1065
             T   ++ APE++ + P       D+WS G     + +G  PF    EP+     V   +
Sbjct: 170  -TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK 228
Query: 1066 YRFEYLFKELTQEATRFLMLIFKHEVDWITLANNI 1100
               E + + ++ EA  F++  F+ + D    AN++
Sbjct: 229  VHPE-IPESMSAEAKAFILKCFEPDPDKRACANDL 262

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V     + +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 192

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 143  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 198  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 256  VRFPSHFSSDLKDLLRNLLQV 276

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           LG G  G V       +G +YA K++      K  Q +    NE  I+  +    LV+L 
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNFPFLVKLE 107
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
            S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H L + +  L
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
            P +LL+   G  ++ +TDFG ++R+
Sbjct: 168 KPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +    V   L+YLH + + + +++P+N+++   ++  +K+ D G  + V  +   +    
Sbjct: 110  FYAAEVCLALEYLHSKDIIYRDLKPENILLD--KNGHIKITDFGFAKYVPDVTYXL---- 163
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
               P++ APEV++ +P     D WS G+L Y +L+G +PF   +  +T + +     RF 
Sbjct: 164  CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP 223
Query: 1070 YLFKE 1074
              F E
Sbjct: 224  PFFNE 228

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E A GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +L++   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLMIDQQG--YIQVTDFGFAKRV 191

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
           +D Y+   ++G G  G+     ++ S    A K +  +G +     K E+     L H N
Sbjct: 18  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPN 76
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +VR  +   T     I+ E A GGEL   +     ++E +   + +QL+SG+ Y H + +
Sbjct: 77  IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            H  L   + L+       L +  FG S+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSK 165

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH--PINT-P 1011
            ++ G+ Y H   +CH +++ +N ++    + ++K+   G ++      +++H  P +T  
Sbjct: 124  LISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQPKSTVG 178
Query: 1012 NPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPE 1056
             P + APEVL ++    +  DVWS GV  YV+L GA PF    EP+
Sbjct: 179  TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPK 224

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 1127 GWSEKGIPSALFKTKEQAPEVLAEEPIFPQ------TDVWSAGVLAYVLLSGASPFRGQS 1180
            G+S+  +  +  K+    P  +A E +  +       DVWS GV  YV+L GA PF    
Sbjct: 162  GYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
Query: 1181 EPETRQNVNFVRYRFEYLFKE---LTQEATRFLMLIFKRAPGKRPTVEECHENRWL---V 1234
            EP+  +         +Y   +   ++ E    +  IF   P KR ++ E   + W    +
Sbjct: 222  EPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 281
Query: 1235 PSEYM 1239
            P++ M
Sbjct: 282  PADLM 286

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
           +D Y+   ++G G  G+     ++ S    A K +  +G +     K E+     L H N
Sbjct: 18  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPN 76
Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +VR  +   T     I+ E A GGEL   +     ++E +   + +QL+SG+ Y H + +
Sbjct: 77  IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            H  L   + L+       L +  FG S+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSK 165

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH--PINT-P 1011
            ++ G+ Y H   +CH +++ +N ++    + ++K+   G ++      +++H  P +T  
Sbjct: 124  LISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQPKDTVG 178
Query: 1012 NPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPE 1056
             P + APEVL ++    +  DVWS GV  YV+L GA PF    EP+
Sbjct: 179  TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPK 224

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 1144 APEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE- 1201
            APEVL ++    +  DVWS GV  YV+L GA PF    EP+  +         +Y   + 
Sbjct: 184  APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY 243
Query: 1202 --LTQEATRFLMLIFKRAPGKRPTVEECHENRWL---VPSEYM 1239
              ++ E    +  IF   P KR ++ E   + W    +P++ M
Sbjct: 244  VHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLM 286

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V     + +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 62  DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 120
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 181 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 212

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 163  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 217
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 218  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 275
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 276  VRFPSHFSSDLKDLLRNLLQV 296

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 79/153 (51%), Gaps = 8/153 (5%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLF----KNELDIMNQLCHR 240
           +  G+ LG+G    VY A    +G   A K M  K   YK+      +NE+ I  QL H 
Sbjct: 13  FKVGNLLGKGSFAGVYRAESIHTGLEVAIK-MIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           +++ L++ +E  +   ++ E+   GE+   L  R   ++E +  H++ Q+++G+ Y+H  
Sbjct: 72  SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            I H  LT  +LL+      ++ + DFGL+ ++
Sbjct: 132 GILHRDLTLSNLLLTR--NMNIKIADFGLATQL 162

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            ++ G+ YLH  G+ H ++   N+++   R++ +K+ D G   ++ K+    H      P 
Sbjct: 121  IITGMLYLHSHGILHRDLTLSNLLLT--RNMNIKIADFGLATQL-KMPHEKHYTLCGTPN 177
Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE 1074
            + +PE+        ++DVWS G + Y LL G  PF   +   T   V    Y        
Sbjct: 178  YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSF--- 234
Query: 1075 LTQEATRFL-MLIFKHEVDWITLANNIDHEFW 1105
            L+ EA   +  L+ ++  D ++L++ +DH F 
Sbjct: 235  LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E A GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +L++   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLMIDQQG--YIKVTDFGFAKRV 191

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++   +   +K+ D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V     + +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 34  DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 92
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   + E     Y  Q++   +Y+H 
Sbjct: 93  FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 153 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 184

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 135  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 189
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 190  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 247
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 248  VRFPSHFSSDLKDLLRNLLQV 268

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHR 240
           D Y+  + +G G T +V  A         A K +  +  Q     L K E+  M+Q  H 
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK-EIQAMSQCHHP 73
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLT--------RQSYYTEYDIAHYIRQLLSG 292
           N+V  + S+  KD   ++ +L  GG +L  +         +     E  IA  +R++L G
Sbjct: 74  NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
           L+Y+H+    H  +  G++L+   G   + + DFG+S  + + G + 
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGS--VQIADFGVSAFLATGGDIT 178

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---- 1004
            A  +  VL+GL+YLH  G  H +++  N+++    SVQ+   D G +  +   G +    
Sbjct: 124  ATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIA--DFGVSAFLATGGDITRNK 181
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFP-QTDVWSAGVLAYVLLSGASPF 1049
            +       P + APEV+ +   +  + D+WS G+ A  L +GA+P+
Sbjct: 182  VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G       A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 32  FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 90
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H   
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 151 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 181

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT---KLGTLIH 1006
            +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++   K      
Sbjct: 134  FYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPESKQARANX 191
Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
             + T   ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y
Sbjct: 192  FVGTA--QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 249
Query: 1067 RF-EYLFKELTQEATRFLML 1085
             F E  F +      + L+L
Sbjct: 250  DFPEKFFPKARDLVEKLLVL 269

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHR 240
           D Y+  + +G G T +V  A         A K +  +  Q     L K E+  M+Q  H 
Sbjct: 10  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK-EIQAMSQCHHP 68
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLT--------RQSYYTEYDIAHYIRQLLSG 292
           N+V  + S+  KD   ++ +L  GG +L  +         +     E  IA  +R++L G
Sbjct: 69  NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
           L+Y+H+    H  +  G++L+   G     + DFG+S  + + G + 
Sbjct: 129 LEYLHKNGQIHRDVKAGNILLGEDGSVQ--IADFGVSAFLATGGDIT 173

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---- 1004
            A  +  VL+GL+YLH  G  H +++  N+++    SVQ+   D G +  +   G +    
Sbjct: 119  ATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIA--DFGVSAFLATGGDITRNK 176
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFP-QTDVWSAGVLAYVLLSGASPF 1049
            +       P + APEV+ +   +  + D+WS G+ A  L +GA+P+
Sbjct: 177  VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V     + +G ++A K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM----TGKGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 27  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 85
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 86  FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 146 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 177

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-----TK 1000
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV     T 
Sbjct: 128  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVKGRTWTL 184
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
             GT         PE+ APE++  +      D W+ GVL Y + +G  PF      +  + 
Sbjct: 185  CGT---------PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 235
Query: 1061 VNFVRYRFEYLFKELTQEATRFLMLI 1086
            +   + RF   F    ++  R L+ +
Sbjct: 236  IVSGKVRFPSHFSSDLKDLLRNLLQV 261

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V     + +G ++A K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY---KSLFKNELDIMNQLCHRNLVRLHD 247
           LG+G  G V     R++G+ YA K +  K  +    +++  NE  I+ ++  R +V L  
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 248 SYETKDSFTIISELAGGGELLHSL--TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
           +YETKD+  ++  L  GG+L   +    Q+ + E     Y  ++  GL+ +HR  I +  
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRD 311
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLS 329
           L P ++L+   G  H+ ++D GL+
Sbjct: 312 LKPENILLDDHG--HIRISDLGLA 333

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
               +  GL+ LH   + + +++P+N+++       +++ DLG    V +  T+   + T 
Sbjct: 292  AAEICCGLEDLHRERIVYRDLKPENILLDD--HGHIRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL 1071
               + APEV+  E      D W+ G L Y +++G SPF+ + +   R+ V       E L
Sbjct: 350  G--YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV-------ERL 400
Query: 1072 FKELTQE-ATRF 1082
             KE+ +E + RF
Sbjct: 401  VKEVPEEYSERF 412

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E A GGE+   L R   + E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +L++   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLMIDQQG--YIKVTDFGFAKRV 191

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++   +   +K+ D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 192

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 143  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 198  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 256  VRFPSHFSSDLKDLLRNLLQV 276

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 192

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-----TK 1000
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV     T 
Sbjct: 143  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVKGRTWTL 199
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
             GT         PE+ APE++  +      D W+ GVL Y + +G  PF      +  + 
Sbjct: 200  CGT---------PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 250
Query: 1061 VNFVRYRFEYLFKELTQEATRFLMLI 1086
            +   + RF   F    ++  R L+ +
Sbjct: 251  IVSGKVRFPSHFSSDLKDLLRNLLQV 276

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY---KSLFKNELDIMNQLCHRNLVRLHD 247
           LG+G  G V     R++G+ YA K +  K  +    +++  NE  I+ ++  R +V L  
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 248 SYETKDSFTIISELAGGGELLHSL--TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
           +YETKD+  ++  L  GG+L   +    Q+ + E     Y  ++  GL+ +HR  I +  
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRD 311
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLS 329
           L P ++L+   G  H+ ++D GL+
Sbjct: 312 LKPENILLDDHG--HIRISDLGLA 333

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP 1011
               +  GL+ LH   + + +++P+N+++       +++ DLG    V +  T+   + T 
Sbjct: 292  AAEICCGLEDLHRERIVYRDLKPENILLDD--HGHIRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL 1071
               + APEV+  E      D W+ G L Y +++G SPF+ + +   R+ V       E L
Sbjct: 350  G--YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV-------ERL 400
Query: 1072 FKELTQE-ATRF 1082
             KE+ +E + RF
Sbjct: 401  VKEVPEEYSERF 412

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V     + +G ++A K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
            +D +  LH+    H +I+PDN++M    +  ++L D G   ++ + GT+   +    P++
Sbjct: 188  IDSVHQLHY---VHRDIKPDNILMD--MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDY 242
Query: 1016 AAPEVL-----AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
             +PE+L      +    P+ D WS GV  Y +L G +PF  +S  ET   +   + RF++
Sbjct: 243  ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF 302

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           LG G  G V     + +G +YA K++      K  Q +    NE  I   +    LV+L 
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRIQQAVNFPFLVKLE 108
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
            S++   +  ++ E A GGE+   L R   ++E     Y  Q++   +Y+H L + +  L
Sbjct: 109 FSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
            P +LL+   G  ++ + DFG ++R+
Sbjct: 169 KPENLLIDQQG--YIKVADFGFAKRV 192

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++   +   +K+ D G  +RV   G   
Sbjct: 143  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLID--QQGYIKVADFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 198  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 256  VRFPSHFSSDLKDLLRNLLQV 276

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           ++LG G    VY  + +++G   A K V         S    E+ +M +L H N+VRL+D
Sbjct: 11  EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYT----EYDIAHYIR-QLLSGLDYMHRLSIA 302
              T++  T++ E        +  +R    T    E ++  Y + QLL GL + H   I 
Sbjct: 71  VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKIL 130
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           H  L P +LL+   G   L L DFGL+R   +FG
Sbjct: 131 HRDLKPQNLLINKRG--QLKLGDFGLAR---AFG 159

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 82/154 (53%), Gaps = 14/154 (9%)
Query: 191 LGRGVTGIVYHAVERS---SGRNYAAKVMT-------GKGNQYKSLFKNELDIMNQLCHR 240
           LG G  G V+   + S   +G+ YA KV+         K  ++    +  L+ + Q    
Sbjct: 62  LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ--SP 119
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            LV LH +++T+    +I +   GGEL   L+++  +TE+++  Y+ +++  L+++H+L 
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG 179
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           I +  +   ++L+   G  H++LTDFGLS+   +
Sbjct: 180 IIYRDIKLENILLDSNG--HVVLTDFGLSKEFVA 211

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GGEL   L+++  +TE+++  Y+ +++  L+++H+L I +  +   ++L+   G  H++L
Sbjct: 143 GGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG--HVVL 200
Query: 524 TDFGLSRRITS 534
           TDFGLS+   +
Sbjct: 201 TDFGLSKEFVA 211

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 944  TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
            T H+    V  ++  L++LH  G+ + +I+ +N+++ S  +  V L D G ++      T
Sbjct: 157  TEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS--NGHVVLTDFGLSKEFVADET 214
Query: 1004 LIHPINTPNPEFAAPEVL--AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
                      E+ AP+++   +       D WS GVL Y LL+GASPF    E  ++  +
Sbjct: 215  ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI 274
Query: 1062 N 1062
            +
Sbjct: 275  S 275

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   + E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   + E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 191

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   + E     Y  Q++   +Y+H 
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRV 192

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++     +QV   D G  +RV   G   
Sbjct: 143  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLIDQQGYIQV--TDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 198  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 256  VRFPSHFSSDLKDLLRNLLQV 276

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHR 240
           + FG  LG G    V  A E ++ R YA K++      K N+   + + E D+M++L H 
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHP 92
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             V+L+ +++  +        A  G LL  + +   + E     Y  +++S L+Y+H   
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  L P ++L+      H+ +TDFG ++ ++
Sbjct: 153 IIHRDLKPENILLNE--DMHIQITDFGTAKVLS 183

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 936  CYLPIVIPTTHKDAYCV----TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLID 991
            C L  +      D  C       ++  L+YLH +G+ H +++P+N+++     + +++ D
Sbjct: 118  CLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN--EDMHIQITD 175
Query: 992  LGCTQRVTKLGTLIHPINT--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
             G T +V    +     N+     ++ +PE+L E+     +D+W+ G + Y L++G  PF
Sbjct: 176  FG-TAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
Query: 1050 RGQSEPETRQNVNFVRYRF-EYLFKELTQEATRFLML 1085
            R  +E    Q +  + Y F E  F +      + L+L
Sbjct: 235  RAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 271

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              L +L  S++   +  ++ E A GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +L++   G  ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLMIDQQG--YIKVTDFGFAKRV 192

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++   +   +K+ D G  +RV   G   
Sbjct: 143  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 198  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 256  VRFPSHFSSDLKDLLRNLLQV 276

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              L +L  S++   +  ++ E A GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +L++   G  ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLMIDQQG--YIKVTDFGFAKRV 192

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++   +   +K+ D G  +RV   G   
Sbjct: 143  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 198  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 256  VRFPSHFSSDLKDLLRNLLQV 276

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK----SLFKNELDIMNQLC 238
           D ++    +GRG    V     + +G+ YA K+M  K +  K    S F+ E D++    
Sbjct: 61  DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN-KWDMLKRGEVSCFREERDVLVNGD 119
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIA-HYIRQLLSGLDYMH 297
            R + +LH +++ ++   ++ E   GG+LL  L++       ++A  Y+ +++  +D +H
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL 341
           RL   H  + P ++L+   G  H+ L DFG   ++ + G +  L
Sbjct: 180 RLGYVHRDIKPDNILLDRCG--HIRLADFGSCLKLRADGTVRSL 221

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 942  IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
            IP      Y    V+  +  +H  G  H +I+PDN+++   R   ++L D G   ++   
Sbjct: 159  IPAEMARFYLAEIVM-AIDSVHRLGYVHRDIKPDNILLD--RCGHIRLADFGSCLKLRAD 215
Query: 1002 GTLIHPINTPNPEFAAPEVL-------AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
            GT+   +    P++ +PE+L             P+ D W+ GV AY +  G +PF   S 
Sbjct: 216  GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST 275
Query: 1055 PETRQNVNFVRYRFEYLFKELTQEAT 1080
             ET   +  V Y+ E+L   L  E  
Sbjct: 276  AETYGKI--VHYK-EHLSLPLVDEGV 298

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           + +G+G  G V+  ++  + +  A K++   +        + E+ +++Q     + + + 
Sbjct: 29  ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           SY       II E  GGG  L  L R   + E+ IA  ++++L GLDY+H     H  + 
Sbjct: 89  SYLKGSKLWIIMEYLGGGSAL-DLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 147
Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
             ++L++  G   + L DFG++ ++T
Sbjct: 148 AANVLLSEQG--DVKLADFGVAGQLT 171

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT----KLGTL 1004
            A  +  +L GL YLH     H +I+  NV+++      VKL D G   ++T    K  T 
Sbjct: 123  ATMLKEILKGLDYLHSEKKIHRDIKAANVLLS--EQGDVKLADFGVAGQLTDTQIKRNTF 180
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
            +       P + APEV+ +     + D+WS G+ A  L  G  P
Sbjct: 181  VG-----TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    LG G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 100
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              L +L  S++   +  ++ E A GGE+   L R   + E     Y  Q++   +Y+H 
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +L++   G  ++ +TDFG ++R+
Sbjct: 161 LDLIYRDLKPENLMIDQQG--YIKVTDFGFAKRV 192

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++   +   +K+ D G  +RV   G   
Sbjct: 143  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLMID--QQGYIKVTDFGFAKRVK--GRTW 197
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 198  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 255
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 256  VRFPSHFSSDLKDLLRNLLQV 276

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 191 LGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSLFKN-ELDIMNQLCHRNLVRL--- 245
           +G G  G+VY A    SG   A  KV+ GK       FKN EL IM +L H N+VRL   
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKA------FKNRELQIMRKLDHCNIVRLRYF 81
Query: 246 -HDSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHR 298
            + S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H 
Sbjct: 82  FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHS 140
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
             I H  + P +LL+  P    L L DFG ++++ 
Sbjct: 141 FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
            L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +          PN  +   
Sbjct: 135  LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 185
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
                A E IF  T      DVWSAG +   LL G   F G S
Sbjct: 186  RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 191 LGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSLFKN-ELDIMNQLCHRNLVRL--- 245
           +G G  G+VY A    SG   A  KV+ GK       FKN EL IM +L H N+VRL   
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKA------FKNRELQIMRKLDHCNIVRLRYF 81
Query: 246 -HDSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHR 298
            + S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H 
Sbjct: 82  FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHS 140
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
             I H  + P +LL+  P    L L DFG ++++ 
Sbjct: 141 FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
            L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +          PN  +   
Sbjct: 135  LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 185
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
                A E IF  T      DVWSAG +   LL G   F G S
Sbjct: 186  RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
            +D +  LH+    H +I+PDNV++    +  ++L D G   ++   GT+   +    P++
Sbjct: 204  IDSIHQLHY---VHRDIKPDNVLLDV--NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 258
Query: 1016 AAPEVL-AEEPIF----PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
             +PE+L A E       P+ D WS GV  Y +L G +PF  +S  ET   +     RF++
Sbjct: 259  ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF 318

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
            +D +  LH+    H +I+PDNV++    +  ++L D G   ++   GT+   +    P++
Sbjct: 188  IDSIHQLHY---VHRDIKPDNVLLDV--NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 242
Query: 1016 AAPEVL-AEEPIF----PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
             +PE+L A E       P+ D WS GV  Y +L G +PF  +S  ET   +     RF++
Sbjct: 243  ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF 302

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 30/161 (18%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A + + G  +A K   +  +     S    E+ I+ +L H N+V+L+
Sbjct: 8   EKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 247 DSYETKDSFTIISE-----------LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
           D   TK    ++ E           +  GG  L S+T +S         ++ QLL+G+ Y
Sbjct: 67  DVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKS---------FLLQLLNGIAY 115
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
            H   + H  L P +LL+   G   L + DFGL+R   +FG
Sbjct: 116 CHDRRVLHRDLKPQNLLINREG--ELKIADFGLAR---AFG 151

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 30/161 (18%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A + + G  +A K   +  +     S    E+ I+ +L H N+V+L+
Sbjct: 8   EKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 247 DSYETKDSFTIISE-----------LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
           D   TK    ++ E           +  GG  L S+T +S         ++ QLL+G+ Y
Sbjct: 67  DVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKS---------FLLQLLNGIAY 115
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
            H   + H  L P +LL+   G   L + DFGL+R   +FG
Sbjct: 116 CHDRRVLHRDLKPQNLLINREG--ELKIADFGLAR---AFG 151

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 30/161 (18%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A + + G  +A K   +  +     S    E+ I+ +L H N+V+L+
Sbjct: 8   EKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 247 DSYETKDSFTIISE-----------LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
           D   TK    ++ E           +  GG  L S+T +S         ++ QLL+G+ Y
Sbjct: 67  DVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKS---------FLLQLLNGIAY 115
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
            H   + H  L P +LL+   G   L + DFGL+R   +FG
Sbjct: 116 CHDRRVLHRDLKPQNLLINREG--ELKIADFGLAR---AFG 151

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 942  IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
            +P      Y    VL  L  +H  G  H +++PDN+++   +S  +KL D G   ++ K 
Sbjct: 165  VPEKWARFYTAEVVL-ALDAIHSMGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNKE 221
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEP----IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
            G +        P++ +PEVL  +        + D WS GV  Y +L G +PF   S
Sbjct: 222  GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 277

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    +G G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GGE+   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ + DFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIKVADFGFAKRV 191

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++   +   +K+ D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLID--QQGYIKVADFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 942  IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
            +P      Y    VL  L  +H  G  H +++PDN+++   +S  +KL D G   ++ K 
Sbjct: 170  VPEKWARFYTAEVVL-ALDAIHSMGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNKE 226
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEP----IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
            G +        P++ +PEVL  +        + D WS GV  Y +L G +PF   S
Sbjct: 227  GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 282

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPI 1008
            +    ++  L +LH +G+ + +++ DNV++        KL D G C + +    T     
Sbjct: 128  FYAAEIISALMFLHDKGIIYRDLKLDNVLLD--HEGHCKLADFGMCKEGICNGVTTATFC 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
             TP+  + APE+L E    P  D W+ GVL Y +L G +PF  ++E +  + +
Sbjct: 186  GTPD--YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI 236

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 942  IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
            +P      Y    VL  L  +H  G  H +++PDN+++   +S  +KL D G   ++ K 
Sbjct: 170  VPEKWARFYTAEVVL-ALDAIHSMGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNKE 226
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEP----IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
            G +        P++ +PEVL  +        + D WS GV  Y +L G +PF   S
Sbjct: 227  GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 282

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 7/154 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNL 242
           Y+  +++G G  G V+ A  R +    A K   +        S    E+ ++ +L H+N+
Sbjct: 4   YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
           VRLHD   +    T++ E        +  +         +  ++ QLL GL + H  ++ 
Sbjct: 64  VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           H  L P +LL+   G   L L DFGL+R   +FG
Sbjct: 124 HRDLKPQNLLINRNG--ELKLADFGLAR---AFG 152

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 180 PITDAYDFG--DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMN 235
           P+ D  +F   +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ 
Sbjct: 2   PLVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSG 292
           +L H N+V+L D   T++   ++ E     + L      S  T      I  Y+ QLL G
Sbjct: 62  ELNHPNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           L + H   + H  L P +LL+   G   + L DFGL+R   +FG
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLAR---AFG 158

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 171 GRQVKTRTKPITD---AYDFGDELGRGVTGIVYHAVERSSGRNYAAK--VMTGKGNQYKS 225
            +Q  +   P  D    Y+   ++G+G  G V+ A  R +G+  A K  +M  +   +  
Sbjct: 3   AKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 62
Query: 226 LFKNELDIMNQLCHRNLVRLHDSYETK--------DSFTIISELAG---GGELLHSLTRQ 274
               E+ I+  L H N+V L +   TK         S  ++ +       G L + L + 
Sbjct: 63  TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK- 121
Query: 275 SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             +T  +I   ++ LL+GL Y+HR  I H  +   ++L+   G   L L DFGL+R  + 
Sbjct: 122 --FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV--LKLADFGLARAFSL 177
Query: 335 FGKLNPLEYDVRYVRQALRHPWLNFADR 362
                P  Y  R V    R P L   +R
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGER 205

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-------------- 228
           + Y   DE+G+G  G+V  A   +    YA KV++ K    ++ F               
Sbjct: 13  NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 229 ------------NELDIMNQLCHRNLVRLHDSYE--TKDSFTIISELAGGGELLHSLTRQ 274
                        E+ I+ +L H N+V+L +  +   +D   ++ EL   G ++   T +
Sbjct: 73  CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK 132
Query: 275 SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
              +E     Y + L+ G++Y+H   I H  + P +LLV   G  H+ + DFG+S
Sbjct: 133 PL-SEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG--HIKIADFGVS 184

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 938  LPIVIPTTHKDA-YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQ 996
            +P + P +   A +    ++ G++YLH++ + H +I+P N+++       +K+ D G + 
Sbjct: 128  VPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG--EDGHIKIADFGVSN 185
Query: 997  RVTKLGTLIHPINT-PNPEFAAPEVLAE-EPIFP--QTDVWSAGVLAYVLLSGASPF 1049
                   L+   NT   P F APE L+E   IF     DVW+ GV  Y  + G  PF
Sbjct: 186  EFKGSDALLS--NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK----GNQYKSLFKNELDIMNQ 236
           + D Y+  + +G G  G+V  A  R +G+  A K +        N  ++L   EL I+  
Sbjct: 53  VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL--RELKILKH 110
Query: 237 LCHRNLVRLHDSY-------ETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQ 288
             H N++ + D         E K  + ++  +      LH +   S   T   + +++ Q
Sbjct: 111 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESD---LHQIIHSSQPLTLEHVRYFLYQ 167
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           LL GL YMH   + H  L P +LLV       L + DFG++R + +
Sbjct: 168 LLRGLKYMHSAQVIHRDLKPSNLLVNE--NCELKIGDFGMARGLCT 211

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 942  IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTK 1000
            +P  H   Y     L  L YLH RG+ + +++ DNV++ S     +KL D G C + +  
Sbjct: 118  LPEEHARFYSAEISL-ALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRP 174
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
              T      TPN  + APE+L  E      D W+ GVL + +++G SPF
Sbjct: 175  GDTTSXFCGTPN--YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 171 GRQVKTRTKPITD---AYDFGDELGRGVTGIVYHAVERSSGRNYAAK--VMTGKGNQYKS 225
            +Q  +   P  D    Y+   ++G+G  G V+ A  R +G+  A K  +M  +   +  
Sbjct: 2   AKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 61
Query: 226 LFKNELDIMNQLCHRNLVRLHDSYETK--------DSFTIISELAG---GGELLHSLTRQ 274
               E+ I+  L H N+V L +   TK         S  ++ +       G L + L + 
Sbjct: 62  TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK- 120
Query: 275 SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             +T  +I   ++ LL+GL Y+HR  I H  +   ++L+   G   L L DFGL+R  + 
Sbjct: 121 --FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV--LKLADFGLARAFSL 176
Query: 335 FGKLNPLEYDVRYVRQALRHPWLNFADR 362
                P  Y  R V    R P L   +R
Sbjct: 177 AKNSQPNRYXNRVVTLWYRPPELLLGER 204

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 942  IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTK 1000
            +P  H   Y     L  L YLH RG+ + +++ DNV++ S     +KL D G C + +  
Sbjct: 107  LPEEHARFYSAEISL-ALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRP 163
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFR--GQSEPETR 1058
              T      TPN  + APE+L  E      D W+ GVL + +++G SPF   G S+    
Sbjct: 164  GDTTSXFCGTPN--YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD-NPD 220
Query: 1059 QNVNFVRYRFEYLFKELTQEATR 1081
            QN        +YLF+ + ++  R
Sbjct: 221  QNTE------DYLFQVILEKQIR 237

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 24/133 (18%)
Query: 942  IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
             P      Y    ++DGL+YLH +G+ H +I+P N+++ +           G T +++ L
Sbjct: 106  FPVCQAHGY-FCQLIDGLEYLHSQGIVHKDIKPGNLLLTT-----------GGTLKISAL 153
Query: 1002 GT--LIHPI--------NTPNPEFAAPEVLAEEPIFP--QTDVWSAGVLAYVLLSGASPF 1049
            G    +HP         +  +P F  PE+      F   + D+WSAGV  Y + +G  PF
Sbjct: 154  GVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
Query: 1050 RGQSEPETRQNVN 1062
             G +  +  +N+ 
Sbjct: 214  EGDNIYKLFENIG 226

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 942  IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTK 1000
            +P  H   Y     L  L YLH RG+ + +++ DNV++ S     +KL D G C + +  
Sbjct: 103  LPEEHARFYSAEISL-ALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRP 159
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFR--GQSEPETR 1058
              T      TPN  + APE+L  E      D W+ GVL + +++G SPF   G S+    
Sbjct: 160  GDTTSXFCGTPN--YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD-NPD 216
Query: 1059 QNVNFVRYRFEYLFKELTQEATR 1081
            QN        +YLF+ + ++  R
Sbjct: 217  QNTE------DYLFQVILEKQIR 233

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 171 GRQVKTRTKPITD---AYDFGDELGRGVTGIVYHAVERSSGRNYAAK--VMTGKGNQYKS 225
            +Q  +   P  D    Y+   ++G+G  G V+ A  R +G+  A K  +M  +   +  
Sbjct: 3   AKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 62
Query: 226 LFKNELDIMNQLCHRNLVRLHDSYETKDS------------FTIIS-ELAGGGELLHSLT 272
               E+ I+  L H N+V L +   TK S            F     +LAG   LL ++ 
Sbjct: 63  TALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAG---LLSNVL 119
Query: 273 RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            +  +T  +I   ++ LL+GL Y+HR  I H  +   ++L+   G   L L DFGL+R  
Sbjct: 120 VK--FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAF 175
Query: 333 TSFGKLNPLEYDVRYVRQALRHPWLNFADR 362
           +      P  Y  R V    R P L   +R
Sbjct: 176 SLAKNSQPNRYXNRVVTLWYRPPELLLGER 205

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK----GNQYKSLFKNELDIMNQ 236
           + D Y+  + +G G  G+V  A  R +G+  A K +        N  ++L   EL I+  
Sbjct: 52  VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL--RELKILKH 109
Query: 237 LCHRNLVRLHDSY-------ETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQ 288
             H N++ + D         E K  + ++  +      LH +   S   T   + +++ Q
Sbjct: 110 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESD---LHQIIHSSQPLTLEHVRYFLYQ 166
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           LL GL YMH   + H  L P +LLV       L + DFG++R + +
Sbjct: 167 LLRGLKYMHSAQVIHRDLKPSNLLVNE--NCELKIGDFGMARGLCT 210

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 191 LGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSLFKN-ELDIMNQLCHRNLVRL--- 245
           +G G  G+VY A    SG   A  KV+ GK       FKN EL IM +L H N+VRL   
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKA------FKNRELQIMRKLDHCNIVRLRYF 81
Query: 246 -HDSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHR 298
            + S E KD   +   L      ++ + R      Q+    Y +  Y+ QL   L Y+H 
Sbjct: 82  FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHS 140
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
             I H  + P +LL+  P    L L DFG ++++   G+ N      RY R
Sbjct: 141 FGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 189

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
            L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +    +  I +    + AP
Sbjct: 135  LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRAP 191
Query: 1019 EVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
            E++     +  + DVWSAG +   LL G   F G S
Sbjct: 192  ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 171 GRQVKTRTKPITD---AYDFGDELGRGVTGIVYHAVERSSGRNYAAK--VMTGKGNQYKS 225
            +Q  +   P  D    Y+   ++G+G  G V+ A  R +G+  A K  +M  +   +  
Sbjct: 3   AKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 62
Query: 226 LFKNELDIMNQLCHRNLVRLHDSYETK--------DSFTIISELAG---GGELLHSLTRQ 274
               E+ I+  L H N+V L +   TK         S  ++ +       G L + L + 
Sbjct: 63  TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK- 121
Query: 275 SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             +T  +I   ++ LL+GL Y+HR  I H  +   ++L+   G   L L DFGL+R  + 
Sbjct: 122 --FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSL 177
Query: 335 FGKLNPLEYDVRYVRQALRHPWLNFADR 362
                P  Y  R V    R P L   +R
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGER 205

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKNELDIMNQLCH 239
           D ++ G  LG+G  G VY A E+ S    A KV+     + + +    + E++I   L H
Sbjct: 23  DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            N++RL++ +  +    +I E A  GEL   L +   + E   A  + +L   L Y H  
Sbjct: 83  PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS------RRITSFGKLNPL 341
            + H  + P +LL+       L + DFG S      RR T  G L+ L
Sbjct: 143 KVIHRDIKPENLLLG--LKGELKIADFGWSVHAPSLRRKTMCGTLDYL 188

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 947  KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCT------QRVTK 1000
            + A  +  + D L Y H + + H +I+P+N+++     +++   D G +      +R T 
Sbjct: 124  RTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIA--DFGWSVHAPSLRRKTM 181
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
             GTL         ++  PE++       + D+W  GVL Y LL G  PF   S  ET + 
Sbjct: 182  CGTL---------DYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRR 232
Query: 1061 VNFVRYRF 1068
            +  V  +F
Sbjct: 233  IVKVDLKF 240

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 942  IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTK 1000
            +P  H   Y     L  L YLH RG+ + +++ DNV++ S     +KL D G C + +  
Sbjct: 150  LPEEHARFYSAEISL-ALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRP 206
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
              T      TPN  + APE+L  E      D W+ GVL + +++G SPF
Sbjct: 207  GDTTSTFCGTPN--YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 15/155 (9%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAK------VMTGKGNQYKSLFKNELDIMNQLCHRNLV 243
           ++GRG    VY A     G   A K      +M  K    ++    E+D++ QL H N++
Sbjct: 39  KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKA---RADCIKEIDLLKQLNHPNVI 95
Query: 244 RLHDSYETKDSFTIISELAGGGEL----LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           + + S+   +   I+ ELA  G+L     H   ++    E  +  Y  QL S L++MH  
Sbjct: 96  KYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR 155
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            + H  + P ++ +   G   + L D GL R  +S
Sbjct: 156 RVMHRDIKPANVFITATGV--VKLGDLGLGRFFSS 188

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 953  TSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
              +   L+++H R + H +I+P NV + +   V  KL DLG  +  +   T  H +    
Sbjct: 143  VQLCSALEHMHSRRVMHRDIKPANVFITATGVV--KLGDLGLGRFFSSKTTAAHSL-VGT 199
Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
            P + +PE + E     ++D+WS G L Y + +  SPF G
Sbjct: 200  PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    +G G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GG++   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ + DFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIKVADFGFAKRV 191

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++   +   +K+ D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLID--QQGYIKVADFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
           D ++    +G G  G V       +G +YA K++      K  Q +    NE  I+  + 
Sbjct: 41  DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVN 99
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
              LV+L  S++   +  ++ E   GG++   L R   ++E     Y  Q++   +Y+H 
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           L + +  L P +LL+   G  ++ + DFG ++R+
Sbjct: 160 LDLIYRDLKPENLLIDQQG--YIKVADFGFAKRV 191

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 946  HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI 1005
            H   Y    VL   +YLH   L + +++P+N+++   +   +K+ D G  +RV   G   
Sbjct: 142  HARFYAAQIVLT-FEYLHSLDLIYRDLKPENLLID--QQGYIKVADFGFAKRVK--GRTW 196
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                TP  E+ APE++  +      D W+ GVL Y + +G  PF      +  + +   +
Sbjct: 197  XLCGTP--EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 1066 YRFEYLFKELTQEATRFLMLI 1086
             RF   F    ++  R L+ +
Sbjct: 255  VRFPSHFSSDLKDLLRNLLQV 275

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 7/154 (4%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNL 242
           Y+  +++G G  G V+ A  R +    A K   +        S    E+ ++ +L H+N+
Sbjct: 4   YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
           VRLHD   +    T++ E        +  +         +  ++ QLL GL + H  ++ 
Sbjct: 64  VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           H  L P +LL+   G   L L +FGL+R   +FG
Sbjct: 124 HRDLKPQNLLINRNG--ELKLANFGLAR---AFG 152

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVR 244
           F  E+GRG    VY  ++  +    A   +  +      +  FK E + +  L H N+VR
Sbjct: 30  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 245 LHDSYET----KDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            +DS+E+    K    +++EL   G L   L R        +  + RQ+L GL ++H  +
Sbjct: 90  FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT 149
Query: 301 --IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR-RITSFGK 337
             I H  L   ++ +  P G  + + D GL+  +  SF K
Sbjct: 150 PPIIHRDLKCDNIFITGPTG-SVKIGDLGLATLKRASFAK 188

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 176
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
           I H  + P +LL+  P    L L DFG ++++   G+ N      RY R
Sbjct: 177 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 223

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
            L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +    +  I +    + AP
Sbjct: 169  LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRAP 225
Query: 1019 EVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
            E++     +  + DVWSAG +   LL G   F G S
Sbjct: 226  ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 36  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 91
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 92  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 150
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
           I H  + P +LL+  P    L L DFG ++++   G+ N      RY R
Sbjct: 151 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 197

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
             L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +    +  I +    + A
Sbjct: 142  SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRA 198
Query: 1018 PEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
            PE++     +  + DVWSAG +   LL G   F G S
Sbjct: 199  PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 235

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           D +G+G  G VY  ++  +    A K++   +        + E+ +++Q     + R   
Sbjct: 25  DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           SY       II E  GGG  L  L +     E  IA  +R++L GLDY+H     H  + 
Sbjct: 85  SYLKSTKLWIIMEYLGGGSAL-DLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIK 143
Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
             ++L++  G   + L DFG++ ++T
Sbjct: 144 AANVLLSEQG--DVKLADFGVAGQLT 167

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Query: 938  LPIVIPTTHKDAYCVT---SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGC 994
            L ++ P   ++ Y  T    +L GL YLH     H +I+  NV+++      VKL D G 
Sbjct: 105  LDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS--EQGDVKLADFGV 162
Query: 995  TQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
              ++T    +        P + APEV+ +     + D+WS G+ A  L  G  P
Sbjct: 163  AGQLTDT-QIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 47  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 102
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 161
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
           I H  + P +LL+  P    L L DFG ++++   G+ N      RY R
Sbjct: 162 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 208

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
             L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +    +  I +    + A
Sbjct: 153  SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRA 209
Query: 1018 PEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
            PE++     +  + DVWSAG +   LL G   F G S
Sbjct: 210  PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 246

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 96  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 154
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
           I H  + P +LL+  P    L L DFG ++++   G+ N      RY R
Sbjct: 155 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 201

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
            L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +    +  I +    + AP
Sbjct: 147  LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRAP 203
Query: 1019 EVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
            E++     +  + DVWSAG +   LL G   F G S
Sbjct: 204  ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 56  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 111
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 170
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           I H  + P +LL+  P    L L DFG ++++
Sbjct: 171 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 201

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
            L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +          PN  +   
Sbjct: 163  LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 213
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
                A E IF  T      DVWSAG +   LL G   F G S
Sbjct: 214  RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 255

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 176
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           I H  + P +LL+  P    L L DFG ++++
Sbjct: 177 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 207

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
            L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +          PN  +   
Sbjct: 169  LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 219
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
                A E IF  T      DVWSAG +   LL G   F G S
Sbjct: 220  RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 84  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 142
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
           I H  + P +LL+  P    L L DFG ++++   G+ N      RY R
Sbjct: 143 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 189

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
             L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +    +  I +    + A
Sbjct: 134  SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRA 190
Query: 1018 PEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
            PE++     +  + DVWSAG +   LL G   F G S
Sbjct: 191  PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 41  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 96
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 97  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 155
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  + P +LL+  P    L L DFG ++++ 
Sbjct: 156 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 187

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
             L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +          PN  +  
Sbjct: 147  SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYIC 197
Query: 1018 PEVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
                 A E IF  T      DVWSAG +   LL G   F G S
Sbjct: 198  SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 240

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 84  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 142
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  + P +LL+  P    L L DFG ++++ 
Sbjct: 143 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
             L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +    +  I +    + A
Sbjct: 134  SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRA 190
Query: 1018 PEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
            PE++     +  + DVWSAG +   LL G   F G S
Sbjct: 191  PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 84  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 142
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  + P +LL+  P    L L DFG ++++ 
Sbjct: 143 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
             L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +          PN  +  
Sbjct: 134  SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYIC 184
Query: 1018 PEVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
                 A E IF  T      DVWSAG +   LL G   F G S
Sbjct: 185  SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 29  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 84
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 85  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 143
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  + P +LL+  P    L L DFG ++++ 
Sbjct: 144 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 175

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
             L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +    +  I +    + A
Sbjct: 135  SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRA 191
Query: 1018 PEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
            PE++     +  + DVWSAG +   LL G   F G S
Sbjct: 192  PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 228

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L +    S  T      I  Y+ QLL GL + H   + H
Sbjct: 72  DVIHTENKLYLVFEFLH--QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 130 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 157

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 69  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E       L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 72  DVIHTENKLYLVFEFLSMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 130 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 157

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 64  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 119
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 120 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 178
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           I H  + P +LL+  P    L L DFG ++++
Sbjct: 179 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 209

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
            L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +          PN  +   
Sbjct: 171  LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 221
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
                A E IF  T      DVWSAG +   LL G   F G S
Sbjct: 222  RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 263

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 96  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 154
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
           I H  + P +LL+  P    L L DFG ++++   G+ N      RY R
Sbjct: 155 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 201

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
            L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +    +  I +    + AP
Sbjct: 147  LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRAP 203
Query: 1019 EVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
            E++     +  + DVWSAG +   LL G   F G S
Sbjct: 204  ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E       L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 72  DVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 130 RDLKPENLLINTEGA--IKLADFGLAR---AFG 157

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 15/194 (7%)
Query: 174 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYA-AKVMTGKGNQYKSLFKN--- 229
           VK+R K     Y+  D LG G    VY A ++++ +  A  K+  G  ++ K        
Sbjct: 5   VKSRAK----RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL 60
Query: 230 -ELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
            E+ ++ +L H N++ L D++  K + +++ +       +         T   I  Y+  
Sbjct: 61  REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYV 348
            L GL+Y+H+  I H  L P +LL+   G   L L DFGL++   SFG  N   Y  + V
Sbjct: 121 TLQGLEYLHQHWILHRDLKPNNLLLDENG--VLKLADFGLAK---SFGSPNR-AYXHQVV 174
Query: 349 RQALRHPWLNFADR 362
            +  R P L F  R
Sbjct: 175 TRWYRAPELLFGAR 188

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           LG+G     +   +  +   +A K++      K +Q + +   E+ I   L H+++V  H
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 105
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
             +E  D   ++ EL     LL    R+   TE +  +Y+RQ++ G  Y+HR  + H  L
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
             G+L +       + + DFGL+ ++
Sbjct: 166 KLGNLFLNE--DLEVKIGDFGLATKV 189

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            Y +  ++ G QYLH   + H +++  N+ +     ++VK+ D G   +V   G     + 
Sbjct: 143  YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGER-KKVL 199
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
               P + APEVL+++    + DVWS G + Y LL G  PF      ET
Sbjct: 200  CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 247

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-NELDIMNQLCHRNLVRLHD 247
           D+LG G    VY    + +    A K +  +  +        E+ ++  L H N+V LHD
Sbjct: 8   DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
              T+ S T++ E        +     +    +++  ++ QLL GL Y HR  + H  L 
Sbjct: 68  IIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLK 127
Query: 308 PGDLLVAHPGGRHLLLTDFGLSR 330
           P +LL+   G   L L DFGL+R
Sbjct: 128 PQNLLINERG--ELKLADFGLAR 148

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           LG+G     +   +  +   +A K++      K +Q + +   E+ I   L H+++V  H
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 87
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
             +E  D   ++ EL     LL    R+   TE +  +Y+RQ++ G  Y+HR  + H  L
Sbjct: 88  GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
             G+L +       + + DFGL+ ++
Sbjct: 148 KLGNLFLNE--DLEVKIGDFGLATKV 171

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG----TLI 1005
            Y +  ++ G QYLH   + H +++  N+ +     ++VK+ D G   +V   G    TL 
Sbjct: 125  YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGERKKTLC 182
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
                TPN  + APEVL+++    + DVWS G + Y LL G  PF      ET
Sbjct: 183  ---GTPN--YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 229

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 10  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E       L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 70  DVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 128 RDLKPENLLINTEGA--IKLADFGLAR---AFG 155

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 66  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 121
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 122 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 180
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           I H  + P +LL+  P    L L DFG ++++
Sbjct: 181 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 211

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
            L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +          PN  +   
Sbjct: 173  LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 223
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
                A E IF  T      DVWSAG +   LL G   F G S
Sbjct: 224  RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 265

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           LG+G     +   +  +   +A K++      K +Q + +   E+ I   L H+++V  H
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 107
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
             +E  D   ++ EL     LL    R+   TE +  +Y+RQ++ G  Y+HR  + H  L
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
             G+L +       + + DFGL+ ++
Sbjct: 168 KLGNLFLNE--DLEVKIGDFGLATKV 191

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            Y +  ++ G QYLH   + H +++  N+ +     ++VK+ D G   +V   G     + 
Sbjct: 145  YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGER-KKVL 201
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
               P + APEVL+++    + DVWS G + Y LL G  PF      ET
Sbjct: 202  CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 249

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 11  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E       L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 71  DVIHTENKLYLVFEFLSMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 129 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 156

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 84  SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 142
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           I H  + P +LL+  P    L L DFG ++++ 
Sbjct: 143 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLV 174

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
             L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +    +  I +    + A
Sbjct: 134  SLAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRA 190
Query: 1018 PEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
            PE++     +  + DVWSAG +   LL G   F G S
Sbjct: 191  PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 33  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 88
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 89  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 147
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           I H  + P +LL+  P    L L DFG ++++
Sbjct: 148 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 178

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
            L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +          PN  +   
Sbjct: 140  LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 190
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
                A E IF  T      DVWSAG +   LL G   F G S
Sbjct: 191  RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 232

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 32  IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 87
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 88  SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 146
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
           I H  + P +LL+  P    L L DFG ++++   G+ N      RY R
Sbjct: 147 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR-GEPNVSXICSRYYR 193

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
            L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +    +  I +    + AP
Sbjct: 139  LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVRGEPNVSXICSRY--YRAP 195
Query: 1019 EVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQS 1053
            E++     +  + DVWSAG +   LL G   F G S
Sbjct: 196  ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 231

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 68  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 126 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 153

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 68  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 126 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 153

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 69  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 72  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 130 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 157

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 11  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 71  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 129 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 156

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 11  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 71  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 129 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 156

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 69  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           LG+G     +   +  +   +A K++      K +Q + +   E+ I   L H+++V  H
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 83
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
             +E  D   ++ EL     LL    R+   TE +  +Y+RQ++ G  Y+HR  + H  L
Sbjct: 84  GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
             G+L +       + + DFGL+ ++
Sbjct: 144 KLGNLFLNE--DLEVKIGDFGLATKV 167

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG----TLI 1005
            Y +  ++ G QYLH   + H +++  N+ +     ++VK+ D G   +V   G    TL 
Sbjct: 121  YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGERKKTLC 178
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
                TPN  + APEVL+++    + DVWS G + Y LL G  PF      ET
Sbjct: 179  ---GTPN--YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 225

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 69  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 68  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 126 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 153

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 16  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 76  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 133
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 134 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 161

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           LG+G     +   +  +   +A K++      K +Q + +   E+ I   L H+++V  H
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 83
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
             +E  D   ++ EL     LL    R+   TE +  +Y+RQ++ G  Y+HR  + H  L
Sbjct: 84  GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
             G+L +       + + DFGL+ ++
Sbjct: 144 KLGNLFLNE--DLEVKIGDFGLATKV 167

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG----TLI 1005
            Y +  ++ G QYLH   + H +++  N+ +     ++VK+ D G   +V   G    TL 
Sbjct: 121  YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGERKKTLC 178
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
                TPN  + APEVL+++    + DVWS G + Y LL G  PF      ET
Sbjct: 179  ---GTPN--YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 225

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 69  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 68  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 126 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 153

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 69  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL----H 246
           +G G  G+VY A    SG   A K    K  Q K     EL IM +L H N+VRL    +
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 162
Query: 247 DSYETKDSFTIISELAGGGELLHSLTR------QSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            S E KD   +   L    E ++ + R      Q+    Y +  Y+ QL   L Y+H   
Sbjct: 163 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQLFRSLAYIHSFG 221
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           I H  + P +LL+  P    L L DFG ++++
Sbjct: 222 ICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQL 252

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAP 1018
            L Y+H  G+CH +I+P N+++    +V +KL D G  +++ +          PN  +   
Sbjct: 214  LAYIHSFGICHRDIKPQNLLLDPDTAV-LKLCDFGSAKQLVR--------GEPNVSYICS 264
Query: 1019 EVL-AEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQS 1053
                A E IF  T      DVWSAG +   LL G   F G S
Sbjct: 265  RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 306

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 11  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 71  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 129 RDLKPENLLINTEGA--IKLADFGLAR---AFG 156

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 69  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 10  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 70  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 128 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 155

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 10  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 70  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 128 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 155

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 16  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 76  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 133
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 134 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 161

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 72  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 130 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 157

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  G V  AV+  +G   A K +    +   +      EL ++  + H N++ L D 
Sbjct: 33  VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 249 Y---ETKDSFT-IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
           +   ET D FT     +   G  L  L +     E  I   + Q+L GL Y+H   I H 
Sbjct: 93  FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHR 152
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            L PG+L V       L + DFGL+R+  S
Sbjct: 153 DLKPGNLAVNEDC--ELKILDFGLARQADS 180

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK--LGTLIHP 1007
            + V  +L GL+Y+H  G+ H +++P N  +A     ++K++D G  ++      G ++  
Sbjct: 132  FLVYQMLKGLRYIHAAGIIHRDLKPGN--LAVNEDCELKILDFGLARQADSEMXGXVV-- 187
Query: 1008 INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
                   + APEV+     + QT D+WS G +   +++G + F+G
Sbjct: 188  ----TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKV----MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           LG+G     +   +  +   +A K+    +  K +Q + +   E+ I   L H+++V  H
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 81
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
             +E  D   ++ EL     LL    R+   TE +  +Y+RQ++ G  Y+HR  + H  L
Sbjct: 82  GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRI 332
             G+L +       + + DFGL+ ++
Sbjct: 142 KLGNLFLNE--DLEVKIGDFGLATKV 165

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            Y +  ++ G QYLH   + H +++  N+ +     ++VK+ D G   +V   G     + 
Sbjct: 119  YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGER-KKVL 175
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
               P + APEVL+++    + DVWS G + Y LL G  PF      ET
Sbjct: 176  CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 223

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 10  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 70  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 128 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 155

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 69  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 13  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 73  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 130
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 131 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 158

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLC 238
           + + Y   +++G G  G+VY A + S GR  A K   +  +     S    E+ ++ +L 
Sbjct: 19  LMEKYQKLEKVGEGTYGVVYKA-KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMH 297
           H N+V L D   ++   T++ E     +L   L   ++   +  I  Y+ QLL G+ + H
Sbjct: 78  HPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           +  I H  L P +LL+   G   L L DFGL+R   +FG
Sbjct: 137 QHRILHRDLKPQNLLINSDGA--LKLADFGLAR---AFG 170

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 10  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 70  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 128 RDLKPENLLINTEGA--IKLADFGLAR---AFG 155

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 69  DVIHTENKLYLVFEFLH--QDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 127 RDLKPENLLINTEGA--IKLADFGLAR---AFG 154

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLC 238
           + + Y   +++G G  G+VY A + S GR  A K   +  +     S    E+ ++ +L 
Sbjct: 19  LMEKYQKLEKVGEGTYGVVYKA-KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMH 297
           H N+V L D   ++   T++ E     +L   L   ++   +  I  Y+ QLL G+ + H
Sbjct: 78  HPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           +  I H  L P +LL+   G   L L DFGL+R   +FG
Sbjct: 137 QHRILHRDLKPQNLLINSDGA--LKLADFGLAR---AFG 170

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L +    S  T      I  Y+ QLL GL + H   + H
Sbjct: 68  DVIHTENKLYLVFEHVH--QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 126 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 153

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A K   +  +     S    E+ ++ +L H N+V+L 
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 72  DVIHTENKLYLVFEHVD--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 130 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 157

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Query: 173 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNE 230
           QV   T  +   Y     +G G  GIV  A +   G N A K ++   +   +      E
Sbjct: 12  QVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRE 71
Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIR 287
           L ++  + H+N++ L + +  + +     ++    EL+ +   Q  + E D   +++ + 
Sbjct: 72  LVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLY 131
Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
           Q+L G+ ++H   I H  L P +++V       +L  DFGL+R  ++   + P
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL--DFGLARTASTNFMMTP 182

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            +Y +  +L G+++LH  G+ H +++P N+V+ S     +K++D G   R      ++ P 
Sbjct: 127  SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLA-RTASTNFMMTPY 183
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
                  + APEV+         D+WS G +   L+ G+  F+G
Sbjct: 184  VVTR-YYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG 225

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           +++G+G  G V+  ++  + +  A K++   +        + E+ +++Q     + + + 
Sbjct: 28  EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           SY       II E  GGG  L  L       E  IA  +R++L GLDY+H     H  + 
Sbjct: 88  SYLKDTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 146
Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
             ++L++  G   + L DFG++ ++T
Sbjct: 147 AANVLLSEHG--EVKLADFGVAGQLT 170

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            A  +  +L GL YLH     H +I+  NV+++     +VKL D G   ++T    +    
Sbjct: 122  ATILREILKGLDYLHSEKKIHRDIKAANVLLS--EHGEVKLADFGVAGQLTDT-QIKRNX 178
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
                P + APEV+ +     + D+WS G+ A  L  G  P
Sbjct: 179  FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           +++G+G  G V+  ++  + +  A K++   +        + E+ +++Q     + + + 
Sbjct: 13  EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           SY       II E  GGG  L  L       E  IA  +R++L GLDY+H     H  + 
Sbjct: 73  SYLKDTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
             ++L++  G   + L DFG++ ++T
Sbjct: 132 AANVLLSEHG--EVKLADFGVAGQLT 155

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            A  +  +L GL YLH     H +I+  NV+++     +VKL D G   ++T    +    
Sbjct: 107  ATILREILKGLDYLHSEKKIHRDIKAANVLLS--EHGEVKLADFGVAGQLTDT-QIKRNX 163
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
                P + APEV+ +     + D+WS G+ A  L  G  P
Sbjct: 164  FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           +++G+G  G V+  ++  + +  A K++   +        + E+ +++Q     + + + 
Sbjct: 13  EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           SY       II E  GGG  L  L       E  IA  +R++L GLDY+H     H  + 
Sbjct: 73  SYLKDTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
             ++L++  G   + L DFG++ ++T
Sbjct: 132 AANVLLSEHG--EVKLADFGVAGQLT 155

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT----KLGTL 1004
            A  +  +L GL YLH     H +I+  NV+++     +VKL D G   ++T    K  T 
Sbjct: 107  ATILREILKGLDYLHSEKKIHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNTF 164
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
            +       P + APEV+ +     + D+WS G+ A  L  G  P
Sbjct: 165  VG-----TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK----NELDIMNQ 236
           I+  +     LG G  G+V  A  + +G   A K +       K LF      E+ I+  
Sbjct: 9   ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKH 65
Query: 237 LCHRNLVRLH-----DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
             H N++ +      DS+E  +   II EL      LH +      ++  I ++I Q L 
Sbjct: 66  FKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLR 123
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            +  +H  ++ H  L P +LL+       L + DFGL+R I
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLIN--SNCDLKVCDFGLARII 162

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK----NELDIMNQ 236
           I+  +     LG G  G+V  A  + +G   A K +       K LF      E+ I+  
Sbjct: 9   ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKH 65
Query: 237 LCHRNLVRLH-----DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
             H N++ +      DS+E  +   II EL      LH +      ++  I ++I Q L 
Sbjct: 66  FKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLR 123
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            +  +H  ++ H  L P +LL+       L + DFGL+R I
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLIN--SNCDLKVCDFGLARII 162

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK----NELDIMNQ 236
           I+  +     LG G  G+V  A  + +G   A K +       K LF      E+ I+  
Sbjct: 9   ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKH 65
Query: 237 LCHRNLVRLH-----DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
             H N++ +      DS+E  +   II EL      LH +      ++  I ++I Q L 
Sbjct: 66  FKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLR 123
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            +  +H  ++ H  L P +LL+       L + DFGL+R I
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLIN--SNCDLKVCDFGLARII 162

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
           G Q+K     I D Y    + LG G+ G V     + +   +A K++    +  K+  + 
Sbjct: 7   GLQIKKNA--IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREV 61
Query: 230 ELDIMNQLCHRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQS--YYTEYDIA 283
           EL      C  ++VR+ D YE     +    I+ E   GGEL   +  +    +TE + +
Sbjct: 62  ELHWRASQCP-HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 120
Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRIT 333
             ++ +   + Y+H ++IAH  + P +LL        +L LTDFG ++  T
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 942  IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
            +P      Y    VL  L  +H  GL H +++PDN+++   +   +KL D G   ++ + 
Sbjct: 171  VPEKWAKFYTAEVVL-ALDAIHSMGLIHRDVKPDNMLLD--KHGHLKLADFGTCMKMDET 227
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEP----IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
            G +        P++ +PEVL  +        + D WS GV  + +L G +PF   S
Sbjct: 228  GMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 283

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
           +GRG  G+V  A  R+  ++ A K +  +    +  F  EL  ++++ H N+V+L+ +  
Sbjct: 17  VGRGAFGVVCKAKWRA--KDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVKLYGA-- 70
Query: 251 TKDSFTIISELAGGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL---SIAHL 304
             +   ++ E A GG L   LH      YYT      +  Q   G+ Y+H +   ++ H 
Sbjct: 71  CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 130
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            L P +LL+   GG  L + DFG +  I +
Sbjct: 131 DLKPPNLLLVA-GGTVLKICDFGTACDIQT 159

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           +++G+G  G V+  ++  + +  A K++   +        + E+ +++Q     + + + 
Sbjct: 33  EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 307
           SY       II E  GGG  L  L       E  IA  +R++L GLDY+H     H  + 
Sbjct: 93  SYLKDTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 151
Query: 308 PGDLLVAHPGGRHLLLTDFGLSRRIT 333
             ++L++  G   + L DFG++ ++T
Sbjct: 152 AANVLLSEHG--EVKLADFGVAGQLT 175

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT----KLGTL 1004
            A  +  +L GL YLH     H +I+  NV+++     +VKL D G   ++T    K  T 
Sbjct: 127  ATILREILKGLDYLHSEKKIHRDIKAANVLLS--EHGEVKLADFGVAGQLTDTQIKRNTF 184
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP 1048
            +       P + APEV+ +     + D+WS G+ A  L  G  P
Sbjct: 185  VG-----TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV--TKLGTLIHPINTPN 1012
            +LDG+++ H   + H +I+P N+++ S +++  K+ D G  + +  T L    H + T  
Sbjct: 120  ILDGIKHAHDMRIVHRDIKPQNILIDSNKTL--KIFDFGIAKALSETSLTQTNHVLGTV- 176
Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
             ++ +PE    E     TD++S G++ Y +L G  PF G++
Sbjct: 177  -QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
           +GRG  G+V  A  R+  ++ A K +  +    +  F  EL  ++++ H N+V+L+ +  
Sbjct: 16  VGRGAFGVVCKAKWRA--KDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVKLYGA-- 69
Query: 251 TKDSFTIISELAGGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL---SIAHL 304
             +   ++ E A GG L   LH      YYT      +  Q   G+ Y+H +   ++ H 
Sbjct: 70  CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            L P +LL+   GG  L + DFG +  I +
Sbjct: 130 DLKPPNLLLV-AGGTVLKICDFGTACDIQT 158

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 7/155 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +   G N A K ++   +   +      EL ++  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q  + E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNP 340
           L P +++V       +L  DFGL+R   +   + P
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTACTNFMMTP 184

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            +Y +  +L G+++LH  G+ H +++P N+V+ S     +K++D G   R      ++ P 
Sbjct: 129  SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLA-RTACTNFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
                  + APEV+         D+WS G +   L+ G   F+G
Sbjct: 186  VVTR-YYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQG 227

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYA-AKV-MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A  K+ +  +     S    E+ ++ +L H N+V+L 
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 69  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 127 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 154

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYA-AKV-MTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +++G G  G+VY A  + +G   A  K+ +  +     S    E+ ++ +L H N+V+L 
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAH 303
           D   T++   ++ E     + L      S  T      I  Y+ QLL GL + H   + H
Sbjct: 68  DVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             L P +LL+   G   + L DFGL+R   +FG
Sbjct: 126 RDLKPQNLLINTEGA--IKLADFGLAR---AFG 153

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 168 YARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLF 227
           Y +G  +K    P  D Y+    +GRG  G VY A ++++ +N A K +      ++ L 
Sbjct: 15  YFQGAIIKNVKVP--DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVN---RMFEDLI 69
Query: 228 K-----NELDIMNQLCHRNLVRLHDSYETK-----DSFTIISELAGGGELLHSLTRQSYY 277
                  E+ I+N+L    ++RLHD    +     D   I+ E+A   +L        + 
Sbjct: 70  DCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIA-DSDLKKLFKTPIFL 128
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           TE  +   +  LL G  ++H   I H  L P + L+       + + DFGL+R I S
Sbjct: 129 TEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCS--VKICDFGLARTINS 183

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           G+ LG+G  G       R +G     K +     + +  F  E+ +M  L H N+++   
Sbjct: 15  GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 248 SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
                     I+E   GG L   + +  S Y       + + + SG+ Y+H ++I H  L
Sbjct: 75  VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDL 134
Query: 307 TPGDLLVAHPGGRHLLLTDFGLSR 330
              + LV     +++++ DFGL+R
Sbjct: 135 NSHNCLVRE--NKNVVVADFGLAR 156

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
           L P +++V       +L  DFGL+R   +   + P E   RY R
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSFMMTP-EVVTRYYR 192

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 928  FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
             +L  + LC +  +     + +Y +  +L G+++LH  G+ H +++P N+V+ S     +
Sbjct: 108  MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 165
Query: 988  KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1047
            K++D G   R      ++ P       + APEV+         D+WS G +   ++ G  
Sbjct: 166  KILDFGLA-RTAGTSFMMTP-EVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
Query: 1048 PFRG 1051
             F G
Sbjct: 224  LFPG 227

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
           L P +++V       +L  DFGL+R   +   + P E   RY R
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSFMMEP-EVVTRYYR 192

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 954  SVLDGLQYLHWR-GLCHLNIEPDNVVMASVRS----VQVKLIDLGCTQRVTKLGTLIHPI 1008
             +L GL Y+H R G+ H +I+P+NV+M  V S    +Q+K+ DLG      +     H  
Sbjct: 139  QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE-----HYT 193
Query: 1009 NTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            N+    E+ +PEVL   P     D+WS   L + L++G   F
Sbjct: 194  NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 954  SVLDGLQYLHWR-GLCHLNIEPDNVVMASVRS----VQVKLIDLGCTQRVTKLGTLIHPI 1008
             +L GL Y+H R G+ H +I+P+NV+M  V S    +Q+K+ DLG      +     H  
Sbjct: 139  QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE-----HYT 193
Query: 1009 NTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            N+    E+ +PEVL   P     D+WS   L + L++G   F
Sbjct: 194  NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       L + DFGL+R   TSF
Sbjct: 152 LKPSNIVVK--SDXTLKILDFGLARTAGTSF 180

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
           L P +++V       +L  DFGL+R   +   + P E   RY R
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSFMMEP-EVVTRYYR 192

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 77/157 (49%), Gaps = 12/157 (7%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLV 243
           ++  + +G G  G VY      +G+  A KVM   G++ + + K E++++ +   HRN+ 
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEI-KQEINMLKKYSHHRNIA 84
Query: 244 RLHDSYETK------DSFTIISELAGGGEL--LHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
             + ++  K      D   ++ E  G G +  L   T+ +   E  IA+  R++L GL +
Sbjct: 85  TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSH 144
Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           +H+  + H  +   ++L+       + L DFG+S ++
Sbjct: 145 LHQHKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQL 179

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK-LGTLIHP 1007
            AY    +L GL +LH   + H +I+  NV++    + +VKL+D G + ++ + +G     
Sbjct: 132  AYICREILRGLSHLHQHKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQLDRTVGRRNTF 189
Query: 1008 INTPNPEFAAPEVLA--EEPIFP---QTDVWSAGVLAYVLLSGASPF 1049
            I TP   + APEV+A  E P      ++D+WS G+ A  +  GA P 
Sbjct: 190  IGTPY--WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---CTQRVTKLGTLIH 1006
            Y +   L+GL+YLH R + H +++ DNV+++S  S +  L D G   C Q      +L+ 
Sbjct: 168  YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLT 226
Query: 1007 PINTPNPE-FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP----FRG 1051
                P  E   APEV+  +P   + D+WS+  +   +L+G  P    FRG
Sbjct: 227  GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 276

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---CTQRVTKLGTLIH 1006
            Y +   L+GL+YLH R + H +++ DNV+++S  S +  L D G   C Q      +L+ 
Sbjct: 154  YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLT 212
Query: 1007 PINTPNPE-FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP----FRG 1051
                P  E   APEV+  +P   + D+WS+  +   +L+G  P    FRG
Sbjct: 213  GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 262

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---CTQRVTKLGTLIH 1006
            Y +   L+GL+YLH R + H +++ DNV+++S  S +  L D G   C Q      +L+ 
Sbjct: 170  YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLT 228
Query: 1007 PINTPNPE-FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP----FRG 1051
                P  E   APEV+  +P   + D+WS+  +   +L+G  P    FRG
Sbjct: 229  GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 278

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 152 LKPSNIVVKSDATLKIL--DFGLARTAGTSF 180

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            +Y +  +L G+++LH  G+ H +++P N+V+ S     +K++D G   R      ++ P 
Sbjct: 129  SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLA-RTAGTSFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
                  + APEV+         D+WS G +   ++ G   F G
Sbjct: 186  VVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 942  IPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
            +P     AY +  +L  L YLH  GL + +++P+N+++      Q+KLIDLG   R+   
Sbjct: 179  LPVAEAIAYLL-EILPALSYLHSIGLVYNDLKPENIMLT---EEQLKLIDLGAVSRINSF 234
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAG 1036
            G L        P F APE++   P    TD+++ G
Sbjct: 235  GYLYG-----TPGFQAPEIVRTGPTV-ATDIYTVG 263

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       L + DFGL+R   TSF
Sbjct: 152 LKPSNIVVK--SDXTLKILDFGLARTAGTSF 180

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 152 LKPSNIVVKSDATLKIL--DFGLARTAGTSF 180

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            +Y +  +L G+++LH  G+ H +++P N+V+ S     +K++D G   R      ++ P 
Sbjct: 129  SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLA-RTAGTSFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
                  + APEV+         D+WS G +   ++ G   F G
Sbjct: 186  VVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       L + DFGL+R   TSF
Sbjct: 152 LKPSNIVVK--SDXTLKILDFGLARTAGTSF 180

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 152 LKPSNIVVKSDATLKIL--DFGLARTAGTSF 180

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            +Y +  +L G+++LH  G+ H +++P N+V+ S     +K++D G   R      ++ P 
Sbjct: 129  SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLA-RTAGTSFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
                  + APEV+         D+WS GV+   ++ G   F G
Sbjct: 186  VVTR-YYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPG 227

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
           +G G  G VY             KV+     Q+++ F+NE+ ++ +  H N++ L   Y 
Sbjct: 44  IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQA-FRNEVAVLRKTRHVNIL-LFMGYM 101
Query: 251 TKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
           TKD+  I+++   G  L   L  +++ +  + +    RQ   G+DY+H  +I H  +   
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSN 161
Query: 310 DLLVAHPGGRHLLLTDFGLS 329
           ++ +    G  + + DFGL+
Sbjct: 162 NIFLHE--GLTVKIGDFGLA 179

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 25  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 85  FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRD 144
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       L + DFGL+R   TSF
Sbjct: 145 LKPSNIVVK--SDXTLKILDFGLARTAGTSF 173

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 31  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 91  FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 150
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 151 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 179

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 180

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 33  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 93  FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 152
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 153 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 181

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 180

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 33  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 93  FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 152
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 153 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 181

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 26  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 86  FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 145
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 146 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 174

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI- 1008
            Y +   + G+QYLH   + H +++  N+ +     + VK+ D G   ++   G     + 
Sbjct: 130  YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKDLC 187
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
             TPN  + APEVL ++    + D+WS G + Y LL G  PF      ET
Sbjct: 188  GTPN--YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET 234

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 26  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 86  FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 145
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 146 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 174

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 25  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 85  FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 144
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 145 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 173

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 180

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            +Y +  +L G+++LH  G+ H +++P N+V+ S     +K++D G   R      ++ P 
Sbjct: 129  SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLA-RTAGTSFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
                  + APEV+         D+WS G +   ++ G   F G
Sbjct: 186  VVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 152 LKPSNIVVKSDATLKIL--DFGLARTAGTSF 180

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            +Y +  +L G+++LH  G+ H +++P N+V+ S     +K++D G   R      ++ P 
Sbjct: 129  SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLA-RTAGTSFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
                  + APEV+         D+WS GV+   ++ G   F G
Sbjct: 186  VVTR-YYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPG 227

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 152 LKPSNIVVKSDATLKIL--DFGLARTAGTSF 180

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            +Y +  +L G+++LH  G+ H +++P N+V+ S     +K++D G   R      ++ P 
Sbjct: 129  SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS--DATLKILDFGLA-RTAGTSFMMTPY 185
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
                  + APEV+         D+WS G +   ++ G   F G
Sbjct: 186  VVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       L + DFGL+R   TSF
Sbjct: 152 LKPSNIVVK--SDXTLKILDFGLARTAGTSF 180

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 70  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 190 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 218

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  G V  A+++ SG   A K ++   +   +      EL ++  + H N++ L D 
Sbjct: 32  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSY---YTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
           +    S     +       + +  ++     ++E  I + + Q+L GL Y+H   + H  
Sbjct: 92  FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSR 330
           L PG+L V       L + DFGL+R
Sbjct: 152 LKPGNLAVNEDC--ELKILDFGLAR 174

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 947  KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK--LGTL 1004
            K  Y V  +L GL+Y+H  G+ H +++P N  +A     ++K++D G  +       G +
Sbjct: 127  KIQYLVYQMLKGLKYIHSAGVVHRDLKPGN--LAVNEDCELKILDFGLARHADAEMTGYV 184
Query: 1005 IHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
            +         + APEV+     + QT D+WS G +   +L+G + F+G+
Sbjct: 185  V------TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 70  IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + +     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 190 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 218

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 26  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 86  FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 145
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 146 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 174

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG----TLI 1005
            Y +   + G+QYLH   + H +++  N+ +     + VK+ D G   ++   G    TL 
Sbjct: 146  YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKTLC 203
Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
                TPN  + APEVL ++    + D+WS G + Y LL G  PF      ET
Sbjct: 204  ---GTPN--YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET 250

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI- 1008
            Y +   + G+QYLH   + H +++  N+ +     + VK+ D G   ++   G     + 
Sbjct: 146  YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKXLC 203
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
             TPN  + APEVL ++    + D+WS G + Y LL G  PF      ET
Sbjct: 204  GTPN--YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET 250

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 180

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 928  FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
             +L  + LC +  +     + +Y +  +L G+++LH  G+ H +++P N+V+ S     +
Sbjct: 108  MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 165
Query: 988  KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1047
            K++D G   R      ++ P       + APEV+         D+WS G +   ++ G  
Sbjct: 166  KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
Query: 1048 PFRG 1051
             F G
Sbjct: 224  LFPG 227

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  G V  A+++ SG   A K ++   +   +      EL ++  + H N++ L D 
Sbjct: 50  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSY---YTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
           +    S     +       + +  ++     ++E  I + + Q+L GL Y+H   + H  
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRD 169
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSR 330
           L PG+L V       L + DFGL+R
Sbjct: 170 LKPGNLAVNEDC--ELKILDFGLAR 192

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 944  TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK--L 1001
            +  K  Y V  +L GL+Y+H  G+ H +++P N  +A     ++K++D G  +       
Sbjct: 142  SEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN--LAVNEDCELKILDFGLARHADAEMT 199
Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQ 1052
            G ++         + APEV+     + QT D+WS G +   +L+G + F+G+
Sbjct: 200  GYVV------TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI- 1008
            Y +   + G+QYLH   + H +++  N+ +     + VK+ D G   ++   G     + 
Sbjct: 146  YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND--DMDVKIGDFGLATKIEFDGERKKDLC 203
Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
             TPN  + APEVL ++    + D+WS G + Y LL G  PF      ET
Sbjct: 204  GTPN--YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET 250

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 32  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 92  FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 152 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 180

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 928  FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
             +L  + LC +  +     + +Y +  +L G+++LH  G+ H +++P N+V+ S     +
Sbjct: 108  MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 165
Query: 988  KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1047
            K++D G   R      ++ P       + APEV+         D+WS G +   ++ G  
Sbjct: 166  KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
Query: 1048 PFRG 1051
             F G
Sbjct: 224  LFPG 227

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 34  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 94  FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 153
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 154 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 182

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 928  FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
             +L  + LC +  +     + +Y +  +L G+++LH  G+ H +++P N+V+ S     +
Sbjct: 110  MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 167
Query: 988  KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1047
            K++D G   R      ++ P       + APEV+         D+WS G +   ++ G  
Sbjct: 168  KILDFGLA-RTAGTSFMMVPFVVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 225
Query: 1048 PFRG 1051
             F G
Sbjct: 226  LFPG 229

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 37  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 97  FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 156
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 157 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 185

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 927  WFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLH-WRGLCHLNIEPDNVVMASVRSV 985
            +F L  +  C++PI +         + SVL+   Y+H  + +CH +++P N++M   ++ 
Sbjct: 137  FFVLDKNYTCFIPIQVIKC-----IIKSVLNSFSYIHNEKNICHRDVKPSNILMD--KNG 189
Query: 986  QVKLIDLGCTQRVT------KLGTLIHPINTPNPEFAAPEVLAEEPIF--PQTDVWSAGV 1037
            +VKL D G ++ +         GT          EF  PE  + E  +   + D+WS G+
Sbjct: 190  RVKLSDFGESEYMVDKKIKGSRGTY---------EFMPPEFFSNESSYNGAKVDIWSLGI 240
Query: 1038 LAYVLLSGASPF 1049
              YV+     PF
Sbjct: 241  CLYVMFYNVVPF 252

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTG--KGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           +G G  GIV  A +    RN A K ++   +   +      EL +M  + H+N++ L + 
Sbjct: 33  IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLG 305
           +  + S     ++    EL+ +   Q    E D   +++ + Q+L G+ ++H   I H  
Sbjct: 93  FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 152
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRI-TSF 335
           L P +++V       +L  DFGL+R   TSF
Sbjct: 153 LKPSNIVVKSDCTLKIL--DFGLARTAGTSF 181

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 928  FKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV 987
             +L  + LC +  +     + +Y +  +L G+++LH  G+ H +++P N+V+ S     +
Sbjct: 109  MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 166
Query: 988  KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS 1047
            K++D G   R      ++ P       + APEV+         D+WS G +   ++ G  
Sbjct: 167  KILDFGLA-RTAGTSFMMTPYVVTR-YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 224
Query: 1048 PFRG 1051
             F G
Sbjct: 225  LFPG 228

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL----------C 238
           +++G G  G V+  V+R  G  YA K       + K      +D  N L           
Sbjct: 15  EKIGSGEFGSVFKCVKRLDGCIYAIK-------RSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLD 294
           H ++VR   ++   D   I +E   GG L  +++      SY+ E ++   + Q+  GL 
Sbjct: 68  HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 295 YMHRLSIAHLGLTPGDLLVA 314
           Y+H +S+ H+ + P ++ ++
Sbjct: 128 YIHSMSLVHMDIKPSNIFIS 147

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL----------C 238
           +++G G  G V+  V+R  G  YA K       + K      +D  N L           
Sbjct: 13  EKIGSGEFGSVFKCVKRLDGCIYAIK-------RSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLD 294
           H ++VR   ++   D   I +E   GG L  +++      SY+ E ++   + Q+  GL 
Sbjct: 66  HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 295 YMHRLSIAHLGLTPGDLLVA 314
           Y+H +S+ H+ + P ++ ++
Sbjct: 126 YIHSMSLVHMDIKPSNIFIS 145

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 943  PTTHKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
            P T K A   +      L + H  G+ H +++P N+++++  +V  K++D G  + +   
Sbjct: 112  PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAV--KVVDFGIARAIADS 169
Query: 1002 GTLIHPINT--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
            G  +          ++ +PE    + +  ++DV+S G + Y +L+G  PF G S
Sbjct: 170  GNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL----------C 238
           +++G G  G V+  V+R  G  YA K       + K      +D  N L           
Sbjct: 15  EKIGSGEFGSVFKCVKRLDGCIYAIK-------RSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLD 294
           H ++VR   ++   D   I +E   GG L  +++      SY+ E ++   + Q+  GL 
Sbjct: 68  HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 295 YMHRLSIAHLGLTPGDLLVA 314
           Y+H +S+ H+ + P ++ ++
Sbjct: 128 YIHSMSLVHMDIKPSNIFIS 147

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL----------C 238
           +++G G  G V+  V+R  G  YA K       + K      +D  N L           
Sbjct: 17  EKIGSGEFGSVFKCVKRLDGCIYAIK-------RSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLD 294
           H ++VR   ++   D   I +E   GG L  +++      SY+ E ++   + Q+  GL 
Sbjct: 70  HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 295 YMHRLSIAHLGLTPGDLLVA 314
           Y+H +S+ H+ + P ++ ++
Sbjct: 130 YIHSMSLVHMDIKPSNIFIS 149

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 51  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      +++ L G    L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 111 RAPTIEQMKDVYLVTHLMGAD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 168
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 169 DLKPSNLLLN--TTXDLKICDFGLAR 192

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           G  +G G  G VY         + A K++  T    Q    FKNE+ ++ +  H N++ L
Sbjct: 17  GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 72
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI---RQLLSGLDYMHRLSIA 302
              Y TK    I+++   G  L H L   +  T++++   I   RQ   G+DY+H  SI 
Sbjct: 73  FMGYSTKPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHAKSII 130
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           H  L   ++ +       + + DFGL+
Sbjct: 131 HRDLKSNNIFLHEDNT--VKIGDFGLA 155

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN-ELDIMNQLCHRNL 242
           AY     +G G  G+V+ A    S      KV+  K       FKN EL IM  + H N+
Sbjct: 41  AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNV 94
Query: 243 VRLHDSY----ETKDSFTIISELAGGGELLHSLTRQSYYTEYD-------IAHYIRQLLS 291
           V L   +    + KD   +   L    E ++  +R  +Y +         I  Y+ QLL 
Sbjct: 95  VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASR--HYAKLKQTMPMLLIKLYMYQLLR 152
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR 349
            L Y+H + I H  + P +LL+  P G  L L DFG S +I   G+ N      RY R
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLLDPPSGV-LKLIDFG-SAKILIAGEPNVSXICSRYYR 208

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLC 238
           + + Y+   ++G G  G+V+    R +G+  A K      +    K +   E+ ++ QL 
Sbjct: 1   MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMH 297
           H NLV L + +  K    ++ E      +LH L R Q    E+ +     Q L  +++ H
Sbjct: 61  HPNLVNLLEVFRRKRRLHLVFEYC-DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 298 RLSIAHLGLTPGDLLVAHPGGRH--LLLTDFGLSRRITS 334
           + +  H  + P ++L+     +H  + L DFG +R +T 
Sbjct: 120 KHNCIHRDVKPENILIT----KHSVIKLCDFGFARLLTG 154

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           G  +G G  G VY         + A K++  T    Q    FKNE+ ++ +  H N++ L
Sbjct: 29  GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 84
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI---RQLLSGLDYMHRLSIA 302
              Y TK    I+++   G  L H L   +  T++++   I   RQ   G+DY+H  SI 
Sbjct: 85  FMGYSTKPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHAKSII 142
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           H  L   ++ +       + + DFGL+
Sbjct: 143 HRDLKSNNIFLHED--NTVKIGDFGLA 167

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 943  PTTHKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
            P T K A   +      L + H  G+ H +++P N+++++  +V  K++D G  + +   
Sbjct: 112  PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV--KVMDFGIARAIADS 169
Query: 1002 GTLIHPINT--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
            G  +          ++ +PE    + +  ++DV+S G + Y +L+G  PF G S
Sbjct: 170  GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG---KGNQYKSLFKNELDIMNQLC-HR 240
           Y+   +LG+G  GIV+ +++R +G   A K +          +  F+ E+ I+ +L  H 
Sbjct: 11  YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHE 69
Query: 241 NLVRLHDSYET---KDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
           N+V L +       +D + +   +      LH++ R +        + + QL+  + Y+H
Sbjct: 70  NIVNLLNVLRADNDRDVYLVFDYMETD---LHAVIRANILEPVHKQYVVYQLIKVIKYLH 126
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
              + H  + P ++L+      H+ + DFGLSR   +  ++
Sbjct: 127 SGGLLHRDMKPSNILLN--AECHVKVADFGLSRSFVNIRRV 165

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRN 241
           D Y    +LGRG    V+ A+  ++      K++       K+  K E+ I+  L    N
Sbjct: 37  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KNKIKREIKILENLRGGPN 93
Query: 242 LVRLHDSYETKDSFT--IISELAGGGELLHSLTRQSY--YTEYDIAHYIRQLLSGLDYMH 297
           ++ L D  +   S T  ++ E     +      +Q Y   T+YDI  Y+ ++L  LDY H
Sbjct: 94  IITLADIVKDPVSRTPALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            + I H  + P ++++ H   R L L D+GL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
           GP++ T  D V +   R P     H   +  +Q Y   T+YDI  Y+ ++L  LDY H +
Sbjct: 91  GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
            I H  + P ++++ H   R L L D+GL+
Sbjct: 151 GIMHRDVKPHNVMIDHE-HRKLRLIDWGLA 179

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 943  PTTHKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
            P T K A   +      L + H  G+ H +++P N+++++  +V  K++D G  + +   
Sbjct: 112  PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV--KVMDFGIARAIADS 169
Query: 1002 GTLIHPINT--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
            G  +          ++ +PE    + +  ++DV+S G + Y +L+G  PF G S
Sbjct: 170  GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 943  PTTHKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
            P T K A   +      L + H  G+ H +++P N+++++  +V  K++D G  + +   
Sbjct: 129  PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV--KVMDFGIARAIADS 186
Query: 1002 GTLIHPINT--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
            G  +          ++ +PE    + +  ++DV+S G + Y +L+G  PF G S
Sbjct: 187  GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 240

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 943  PTTHKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
            P T K A   +      L + H  G+ H +++P N+++++  +V  K++D G  + +   
Sbjct: 112  PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV--KVMDFGIARAIADS 169
Query: 1002 GTLIHPINT--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
            G  +          ++ +PE    + +  ++DV+S G + Y +L+G  PF G S
Sbjct: 170  GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 943  PTTHKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL 1001
            P T K A   +      L + H  G+ H +++P N+++++  +V  K++D G  + +   
Sbjct: 112  PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV--KVMDFGIARAIADS 169
Query: 1002 GTLIHPINT--PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
            G  +          ++ +PE    + +  ++DV+S G + Y +L+G  PF G S
Sbjct: 170  GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNE--DXELKILDFGLAR 173

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 35  IGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 92  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 150 DIIHRDLKPSNLAVNE--DXELKILDFGLAR 178

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           G  +G G  G VY         + A K++  T    Q    FKNE+ ++ +  H N++ L
Sbjct: 13  GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 68
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
              Y TK    I+++   G  L H L    T+       DIA   RQ   G+DY+H  SI
Sbjct: 69  FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 125
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            H  L   ++ +       + + DFGL+
Sbjct: 126 IHRDLKSNNIFLHE--DLTVKIGDFGLA 151

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ + +  T+  +   I Q+L GL Y+H  
Sbjct: 83  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCAKLTDDHVQFLIYQILRGLKYIHSA 140
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 141 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 169

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           G  +G G  G VY         + A K++  T    Q    FKNE+ ++ +  H N++ L
Sbjct: 33  GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 88
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
              Y TK    I+++   G  L H L    T+       DIA   RQ   G+DY+H  SI
Sbjct: 89  FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 145
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            H  L   ++ +       + + DFGL+
Sbjct: 146 IHRDLKSNNIFLHE--DLTVKIGDFGLA 171

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           G  +G G  G VY         + A K++  T    Q    FKNE+ ++ +  H N++ L
Sbjct: 15  GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 70
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
              Y TK    I+++   G  L H L    T+       DIA   RQ   G+DY+H  SI
Sbjct: 71  FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 127
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            H  L   ++ +       + + DFGL+
Sbjct: 128 IHRDLKSNNIFLHE--DLTVKIGDFGLA 153

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           G  +G G  G VY         + A K++  T    Q    FKNE+ ++ +  H N++ L
Sbjct: 40  GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 95
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
              Y TK    I+++   G  L H L    T+       DIA   RQ   G+DY+H  SI
Sbjct: 96  FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 152
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            H  L   ++ +       + + DFGL+
Sbjct: 153 IHRDLKSNNIFLHED--LTVKIGDFGLA 178

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           G  +G G  G VY         + A K++  T    Q    FKNE+ ++ +  H N++ L
Sbjct: 13  GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 68
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
              Y TK    I+++   G  L H L    T+       DIA   RQ   G+DY+H  SI
Sbjct: 69  FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 125
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            H  L   ++ +       + + DFGL+
Sbjct: 126 IHRDLKSNNIFLHE--DLTVKIGDFGLA 151

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKSQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL R
Sbjct: 145 DIIHRDLKPSNLAVNEDS--ELKILDFGLCR 173

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           G  +G G  G VY         + A K++  T    Q    FKNE+ ++ +  H N++ L
Sbjct: 18  GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 73
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
              Y TK    I+++   G  L H L    T+       DIA   RQ   G+DY+H  SI
Sbjct: 74  FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 130
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            H  L   ++ +       + + DFGL+
Sbjct: 131 IHRDLKSNNIFLHE--DLTVKIGDFGLA 156

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 40  VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 96
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 97  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 154
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 155 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 183

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 189 DELGRGVTGIVYHA-VERSSGRNYAAKVMTGKGN---QYKSL--FKNELDIMNQLCHRNL 242
           ++LG G  G+V     +  SG+  +  V   K +   Q +++  F  E++ M+ L HRNL
Sbjct: 18  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +RL+    T     +++ELA  G LL  L + Q ++    ++ Y  Q+  G+ Y+     
Sbjct: 78  IRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 136
Query: 302 AHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
            H  L   +LL+A    R L+ + DFGL R +
Sbjct: 137 IHRDLAARNLLLA---TRDLVKIGDFGLMRAL 165

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLH 246
           E+G G  G VY A +  +    A K M+  G Q    +++   E+  + +L H N ++  
Sbjct: 61  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 247 DSYETKDSFTIISE--LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
             Y  + +  ++ E  L    +LL     +    E +IA      L GL Y+H  ++ H 
Sbjct: 121 GCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG---------------KLNPLEYDVRYVR 349
            +  G++L++ PG   + L DFG +  +                    ++  +YD +   
Sbjct: 179 DVKAGNILLSEPG--LVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDV 236
Query: 350 QALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD 385
            +L    +  A+RKP    P  N +A+   Y++ ++
Sbjct: 237 WSLGITCIELAERKP----PLFNMNAMSALYHIAQN 268

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLH 246
           E+G G  G VY A +  +    A K M+  G Q    +++   E+  + +L H N ++  
Sbjct: 22  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 247 DSYETKDSFTIISE--LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
             Y  + +  ++ E  L    +LL     +    E +IA      L GL Y+H  ++ H 
Sbjct: 82  GCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG---------------KLNPLEYDVRYVR 349
            +  G++L++ PG   + L DFG +  +                    ++  +YD +   
Sbjct: 140 DVKAGNILLSEPG--LVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDV 197
Query: 350 QALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD 385
            +L    +  A+RKP    P  N +A+   Y++ ++
Sbjct: 198 WSLGITCIELAERKP----PLFNMNAMSALYHIAQN 229

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           G  +G G  G VY         + A K++  T    Q    FKNE+ ++ +  H N++ L
Sbjct: 18  GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 73
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
              Y TK    I+++   G  L H L    T+       DIA   RQ   G+DY+H  SI
Sbjct: 74  FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 130
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            H  L   ++ +       + + DFGL+
Sbjct: 131 IHRDLKSNNIFLHE--DLTVKIGDFGLA 156

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           G  +G G  G VY         + A K++  T    Q    FKNE+ ++ +  H N++ L
Sbjct: 41  GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 96
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
              Y TK    I+++   G  L H L    T+       DIA   RQ   G+DY+H  SI
Sbjct: 97  FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 153
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            H  L   ++ +       + + DFGL+
Sbjct: 154 IHRDLKSNNIFLHED--LTVKIGDFGLA 179

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 35  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 92  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 150 DIIHRDLKPSNLAVNE--DXELKILDFGLAR 178

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           G  +G G  G VY         + A K++  T    Q    FKNE+ ++ +  H N++ L
Sbjct: 41  GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 96
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
              Y TK    I+++   G  L H L    T+       DIA   RQ   G+DY+H  SI
Sbjct: 97  FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 153
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            H  L   ++ +       + + DFGL+
Sbjct: 154 IHRDLKSNNIFLHED--LTVKIGDFGLA 179

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 89  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 147 DIIHRDLKPSNLAVNEDS--ELKILDFGLAR 175

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 189 DELGRGVTGIVYHA-VERSSGRNYAAKVMTGKGN---QYKSL--FKNELDIMNQLCHRNL 242
           ++LG G  G+V     +  SG+  +  V   K +   Q +++  F  E++ M+ L HRNL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +RL+    T     +++ELA  G LL  L + Q ++    ++ Y  Q+  G+ Y+     
Sbjct: 74  IRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 132
Query: 302 AHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
            H  L   +LL+A    R L+ + DFGL R +
Sbjct: 133 IHRDLAARNLLLA---TRDLVKIGDFGLMRAL 161

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 189 DELGRGVTGIVYHA-VERSSGRNYAAKVMTGKGN---QYKSL--FKNELDIMNQLCHRNL 242
           ++LG G  G+V     +  SG+  +  V   K +   Q +++  F  E++ M+ L HRNL
Sbjct: 24  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +RL+    T     +++ELA  G LL  L + Q ++    ++ Y  Q+  G+ Y+     
Sbjct: 84  IRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 142
Query: 302 AHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
            H  L   +LL+A    R L+ + DFGL R +
Sbjct: 143 IHRDLAARNLLLAT---RDLVKIGDFGLMRAL 171

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +    ++ GL++LH R + + +++P+NV++    +V++   DLG    + K G       
Sbjct: 293  FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRIS--DLGLAVEL-KAGQTKTKGY 349
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
               P F APE+L  E      D ++ GV  Y +++   PFR + E
Sbjct: 350  AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 83  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 140
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 141 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 169

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +    ++ GL++LH R + + +++P+NV++    +V++   DLG    + K G       
Sbjct: 293  FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRIS--DLGLAVEL-KAGQTKTKGY 349
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
               P F APE+L  E      D ++ GV  Y +++   PFR + E
Sbjct: 350  AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 83  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 140
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 141 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 169

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 35  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 92  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 150 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 178

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 42  VGSGAYGSVCAAFDTKTGLRVAVKKLS---KPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 99  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 156
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 157 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 185

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 29  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 85
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 86  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 143
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 144 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 172

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
            G+++GRG  G V+    R+     A K          K+ F  E  I+ Q  H N+VRL
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 246 HDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
                 K    I+ EL  GG+ L  L T  +      +   +    +G++Y+      H 
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR 237
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L   + LV       L ++DFG+SR
Sbjct: 238 DLAARNCLVTEKN--VLKISDFGMSR 261

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +    ++ GL++LH R + + +++P+NV++    +V++   DLG    + K G       
Sbjct: 293  FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRIS--DLGLAVEL-KAGQTKTKGY 349
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
               P F APE+L  E      D ++ GV  Y +++   PFR + E
Sbjct: 350  AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 49  VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 105
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 163
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 164 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 192

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 189 DELGRGVTGIVYHA-VERSSGRNYAAKVMTGKGN---QYKSL--FKNELDIMNQLCHRNL 242
           ++LG G  G+V     +  SG+  +  V   K +   Q +++  F  E++ M+ L HRNL
Sbjct: 24  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +RL+    T     +++ELA  G LL  L + Q ++    ++ Y  Q+  G+ Y+     
Sbjct: 84  IRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 142
Query: 302 AHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
            H  L   +LL+A    R L+ + DFGL R +
Sbjct: 143 IHRDLAARNLLLAT---RDLVKIGDFGLMRAL 171

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 93  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 151 DIIHRDLKPSNLAVNEDS--ELKILDFGLAR 179

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 189 DELGRGVTGIVYHA-VERSSGRNYAAKVMTGKGN---QYKSL--FKNELDIMNQLCHRNL 242
           ++LG G  G+V     +  SG+  +  V   K +   Q +++  F  E++ M+ L HRNL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +RL+    T     +++ELA  G LL  L + Q ++    ++ Y  Q+  G+ Y+     
Sbjct: 74  IRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 132
Query: 302 AHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
            H  L   +LL+A    R L+ + DFGL R +
Sbjct: 133 IHRDLAARNLLLA---TRDLVKIGDFGLMRAL 161

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
            G+++GRG  G V+    R+     A K          K+ F  E  I+ Q  H N+VRL
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 246 HDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
                 K    I+ EL  GG+ L  L T  +      +   +    +G++Y+      H 
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR 237
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L   + LV       L ++DFG+SR
Sbjct: 238 DLAARNCLVTEKN--VLKISDFGMSR 261

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 50  VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 164
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 165 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 193

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 94  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 152 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 180

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 41  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 97
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 98  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 155
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 156 DIIHRDLKPSNLAVNE--DXELKILDFGLAR 184

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 89  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 147 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 175

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 94  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 152 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 180

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 94  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 152 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 180

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 27  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 83
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 84  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 141
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 142 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 170

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 50  VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 164
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 165 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 193

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 91  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 149 DLKPSNLLLN--TTXDLKICDFGLAR 172

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 36  VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 93  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 151 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 179

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 91  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 149 DLKPSNLLLNTTCD--LKICDFGLAR 172

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY---KSLFKNELDIMNQL 237
           I D Y+    +G G  G V  A ++   R  A K +          K + + E+ I+N+L
Sbjct: 51  IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR-EIAILNRL 109
Query: 238 CHRNLVRLHD-----SYETKDSFTIISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLS 291
            H ++V++ D       E  D   ++ E+A        L R   Y TE  I   +  LL 
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD--FKKLFRTPVYLTELHIKTLLYNLLV 167
Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           G+ Y+H   I H  L P + LV       + + DFGL+R +
Sbjct: 168 GVKYVHSAGILHRDLKPANCLVNQDCS--VKVCDFGLARTV 206

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 94  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 152 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 180

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 95  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 153 DLKPSNLLLN--TTXDLKICDFGLAR 176

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 26  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 83  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 140
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 141 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 169

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 91  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 149 DLKPSNLLLN--TTXDLKICDFGLAR 172

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 27  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 83
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 84  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 141
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 142 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 170

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            +Y    ++  + YL  + + H +I+ +N+V+A      +KLID G    + + G L +  
Sbjct: 133  SYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA--EDFTIKLIDFGSAAYLER-GKLFYTF 189
Query: 1009 NTPNPEFAAPEVLAEEPI-FPQTDVWSAGVLAYVLLSGASPF 1049
                 E+ APEVL   P   P+ ++WS GV  Y L+   +PF
Sbjct: 190  -CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 89  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 147 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 175

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLHD 247
           LGRG  G V+    +++G+ YA K +  K  + +  ++    E  I+ ++  R +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 248 SYETKDSFTIISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
           ++ETK    ++  +  GG++ + +         + E     Y  Q++SGL+++H+ +I +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             L P ++L+   G  ++ ++D GL+  + +
Sbjct: 313 RDLKPENVLLDDDG--NVRISDLGLAVELKA 341

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +    ++ GL++LH R + + +++P+NV++    +V++   DLG    + K G       
Sbjct: 293  FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRIS--DLGLAVEL-KAGQTKTKGY 349
Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
               P F APE+L  E      D ++ GV  Y +++   PFR + E
Sbjct: 350  AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 189 DELGRGVTGIVYHA-VERSSGRNYAAKVMTGKGN---QYKSL--FKNELDIMNQLCHRNL 242
           ++LG G  G+V     +  SG+  +  V   K +   Q +++  F  E++ M+ L HRNL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +RL+    T     +++ELA  G LL  L + Q ++    ++ Y  Q+  G+ Y+     
Sbjct: 74  IRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 132
Query: 302 AHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
            H  L   +LL+A    R L+ + DFGL R +
Sbjct: 133 IHRDLAARNLLLA---TRDLVKIGDFGLMRAL 161

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 89  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 147 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 175

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 173

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 53  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 109
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 167
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 168 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 196

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 28  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 84
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 85  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 142
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 143 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 171

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 42  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 99  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 156
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 157 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 185

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 42  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 99  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 156
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 157 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 185

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 93  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 151 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 179

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  + +  SG   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 59  VGSGAYGSVCSSYDVKSGLKIAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 115
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 116 LDVFTPATSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 173
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 174 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 202

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 41  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 97
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 98  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 155
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 156 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 184

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 49  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 105
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 163
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 164 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 192

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 189 DELGRGVTGIVYHA-VERSSGRNYAAKVMTGKGN---QYKSL--FKNELDIMNQLCHRNL 242
           ++LG G  G+V     +  SG+  +  V   K +   Q +++  F  E++ M+ L HRNL
Sbjct: 18  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +RL+    T     +++ELA  G LL  L + Q ++    ++ Y  Q+  G+ Y+     
Sbjct: 78  IRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 136
Query: 302 AHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
            H  L   +LL+A    R L+ + DFGL R +
Sbjct: 137 IHRDLAARNLLLA---TRDLVKIGDFGLMRAL 165

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           G  +G G  G VY         + A K++  T    Q    FKNE+ ++ +  H N++ L
Sbjct: 29  GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 84
Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI---RQLLSGLDYMHRLSIA 302
              Y T     I+++   G  L H L   +  T++++   I   RQ   G+DY+H  SI 
Sbjct: 85  FMGYSTAPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHAKSII 142
Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           H  L   ++ +       + + DFGL+
Sbjct: 143 HRDLKSNNIFLHED--NTVKIGDFGLA 167

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 50  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 164
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 165 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 193

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 35  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 92  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 150 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 178

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 93  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 150
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 151 DLKPSNLLLNTTCD--LKICDFGLAR 174

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 53  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 109
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 167
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 168 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 196

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAA----KVMTGKGNQYKSLFKNELDIMNQLC-- 238
           Y+   E+G G  G V+ A +  +G  + A    +V TG+     S  + E+ ++  L   
Sbjct: 13  YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETF 71
Query: 239 -HRNLVRLHD-------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
            H N+VRL D         ETK +             L  +      TE  I   + QLL
Sbjct: 72  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE-TIKDMMFQLL 130
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
            GLD++H   + H  L P ++LV   G   + L DFGL+ RI SF
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLA-RIYSF 172

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 942  IPT-THKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK 1000
            +PT T KD   +  +L GL +LH   + H +++P N+++ S  S Q+KL D G  +  + 
Sbjct: 117  VPTETIKDM--MFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSF 172
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
               L   + T    + APEVL +       D+WS G +   +      FRG S+
Sbjct: 173  QMALTSVVVTL--WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 75/191 (39%), Gaps = 27/191 (14%)
Query: 146 GTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDE---------LGRGVT 196
           G+ S   +   EDNE          G  +  + KP+   Y++ +E         LGRG  
Sbjct: 40  GSRSREPSPKTEDNE----------GVLLTEKLKPVD--YEYREEVHWATHQLRLGRGSF 87
Query: 197 GIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT 256
           G V+   ++ +G   A K +     + +     EL     L    +V L+ +        
Sbjct: 88  GEVHRMEDKQTGFQCAVKKV-----RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVN 142
Query: 257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP 316
           I  EL  GG L   +  Q    E    +Y+ Q L GL+Y+H   I H G    D ++   
Sbjct: 143 IFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH-GDVKADNVLLSS 201
Query: 317 GGRHLLLTDFG 327
            G H  L DFG
Sbjct: 202 DGSHAALCDFG 212

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---CTQRVTKLGTLIH 1006
            Y +   L+GL+YLH R + H +++ DNV+++S  S    L D G   C Q       L+ 
Sbjct: 170  YYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGS-HAALCDFGHAVCLQPDGLGKDLLT 228
Query: 1007 PINTPNPE-FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP----FRG 1051
                P  E   APEV+       + DVWS+  +   +L+G  P    FRG
Sbjct: 229  GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 278

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 91  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 149 DLKPSNLLLN--TTXDLKIXDFGLAR 172

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 93  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DFGL+R
Sbjct: 151 DIIHRDLKPSNLAVNEDC--ELKILDFGLAR 179

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 76/192 (39%), Gaps = 46/192 (23%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
           +  Y  G  LG G  GIV    +  SG+ +A K +  +  +YK+    ELDIM  L H N
Sbjct: 6   SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVL-QDPRYKN---RELDIMKVLDHVN 61
Query: 242 LVRLHD-SYETKDS-------------------------------------FTIISELAG 263
           +++L D  Y T D                                        +I E   
Sbjct: 62  IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 264 GG--ELLHSLTRQSYYTEYD-IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 320
               ++L S  R       + I+ YI QL   + ++H L I H  + P +LLV +     
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV-NSKDNT 180
Query: 321 LLLTDFGLSRRI 332
           L L DFG ++++
Sbjct: 181 LKLCDFGSAKKL 192

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 39  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 99  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 156
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 157 DLKPSNLLLNTTCD--LKICDFGLAR 180

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 91  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 148
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 149 DLKPSNLLLNTTCD--LKICDFGLAR 172

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 95  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 153 DLKPSNLLLN--TTXDLKICDFGLAR 176

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA-SVRSVQVKLIDLGCTQRVTKLGTLIHPINT 1010
            ++ +   L+YLH   + H +++P+N+V+    + +  K+IDLG  + + +       + T
Sbjct: 127  LSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT 186
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
               ++ APE+L ++      D WS G LA+  ++G  PF    +P
Sbjct: 187  L--QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP 229

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 29  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 89  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 146
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 147 DLKPSNLLLNTTCD--LKICDFGLAR 170

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMA-SVRSVQVKLIDLGCTQRVTKLGTLIHPINT 1010
            ++ +   L+YLH   + H +++P+N+V+    + +  K+IDLG  + + +       + T
Sbjct: 128  LSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT 187
Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
               ++ APE+L ++      D WS G LA+  ++G  PF    +P
Sbjct: 188  L--QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP 230

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 36  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 96  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 153
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 154 DLKPSNLLLNTTCD--LKICDFGLAR 177

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 37  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 97  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 154
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 155 DLKPSNLLLNTTCD--LKICDFGLAR 178

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 28  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 88  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 145
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 146 DLKPSNLLLNTTCD--LKICDFGLAR 169

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 51  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 111 RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 168
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 169 DLKPSNLLLNTTCD--LKICDFGLAR 192

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 95  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 153 DLKPSNLLLNTTCD--LKICDFGLAR 176

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 95  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 153 DLKPSNLLLNTTCD--LKICDFGLAR 176

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 36  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 96  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 153
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 154 DLKPSNLLLNTTCD--LKICDFGLAR 177

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---CTQRVTKLGTLIH 1006
            Y +   L+GL+YLH R + H +++ DNV+++S  S    L D G   C Q      +L+ 
Sbjct: 189  YYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGS-HAALCDFGHAVCLQPDGLGKSLLT 247
Query: 1007 PINTPNPE-FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP----FRG 1051
                P  E   APEV+       + DVWS+  +   +L+G  P    FRG
Sbjct: 248  GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 297

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 29  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 89  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 146
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 147 DLKPSNLLLNTTCD--LKICDFGLAR 170

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+    H N++ ++D  
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 93  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 150
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 151 DLKPSNLLLNTTSD--LKICDFGLAR 174

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAA----KVMTGKGNQYKSLFKNELDIMNQLC-- 238
           Y+   E+G G  G V+ A +  +G  + A    +V TG+     S  + E+ ++  L   
Sbjct: 13  YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETF 71
Query: 239 -HRNLVRLHD-------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
            H N+VRL D         ETK +             L  +      TE  I   + QLL
Sbjct: 72  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE-TIKDMMFQLL 130
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
            GLD++H   + H  L P ++LV   G   + L DFGL+ RI SF
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLA-RIYSF 172

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 942  IPT-THKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK 1000
            +PT T KD   +  +L GL +LH   + H +++P N+++ S  S Q+KL D G  +  + 
Sbjct: 117  VPTETIKDM--MFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSF 172
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
               L   + T    + APEVL +       D+WS G +   +      FRG S+
Sbjct: 173  QMALTSVVVTL--WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+    H N++ ++D  
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 93  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 150
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 151 DLKPSNLLLNTTCD--LKICDFGLAR 174

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 95  RAPTIEQMKDVYIVQDLMETD--LYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 153 DLKPSNLLLNTTCD--LKICDFGLAR 176

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAA----KVMTGKGNQYKSLFKNELDIMNQLC-- 238
           Y+   E+G G  G V+ A +  +G  + A    +V TG+     S  + E+ ++  L   
Sbjct: 13  YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETF 71
Query: 239 -HRNLVRLHD-------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
            H N+VRL D         ETK +             L  +      TE  I   + QLL
Sbjct: 72  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE-TIKDMMFQLL 130
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
            GLD++H   + H  L P ++LV   G   + L DFGL+ RI SF
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLA-RIYSF 172

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 942  IPT-THKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTK 1000
            +PT T KD   +  +L GL +LH   + H +++P N+++ S  S Q+KL D G  +  + 
Sbjct: 117  VPTETIKDM--MFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSF 172
Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
               L   + T    + APEVL +       D+WS G +   +      FRG S+
Sbjct: 173  QMALTSVVVTL--WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 224 KSLFKNELDIMNQLCHRNLVRLHDSY--ETKDSFTIISELAGGGELLHSLTR----QSYY 277
           K +  +E++++ +L H N+VR +D     T  +  I+ E   GG+L   +T+    + Y 
Sbjct: 49  KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 278 TEYDIAHYIRQLLSGLDYMHRLS-----IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            E  +   + QL   L   HR S     + H  L P ++ +   G +++ L DFGL+R +
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL--DGKQNVKLGDFGLARIL 166
Query: 333 ---TSFGK 337
              TSF K
Sbjct: 167 NHDTSFAK 174

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 224 KSLFKNELDIMNQLCHRNLVRLHDSY--ETKDSFTIISELAGGGELLHSLTR----QSYY 277
           K +  +E++++ +L H N+VR +D     T  +  I+ E   GG+L   +T+    + Y 
Sbjct: 49  KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 278 TEYDIAHYIRQLLSGLDYMHRLS-----IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            E  +   + QL   L   HR S     + H  L P ++ +   G +++ L DFGL+R +
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL--DGKQNVKLGDFGLARIL 166
Query: 333 ---TSFGK 337
              TSF K
Sbjct: 167 NHDTSFAK 174

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 15/148 (10%)
Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           G  +G G  G VY         + A K++  T    Q    FKNE+ ++ +  H N++ L
Sbjct: 13  GQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-L 68
Query: 246 HDSYETKDSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
              Y T     I+++   G  L H L    T+       DIA   RQ   G+DY+H  SI
Sbjct: 69  FMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA---RQTAQGMDYLHAKSI 125
Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            H  L   ++ +       + + DFGL+
Sbjct: 126 IHRDLKSNNIFLHE--DLTVKIGDFGLA 151

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/172 (26%), Positives = 68/172 (39%), Gaps = 19/172 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC----------HR 240
           LG G  G V+    +  GR YA K       +  S F+   D   +L           H 
Sbjct: 65  LGHGSYGEVFKVRSKEDGRLYAVK-------RSMSPFRGPKDRARKLAEVGSHEKVGQHP 117
Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             VRL  ++E      + +EL G     H     +   E  +  Y+R  L  L ++H   
Sbjct: 118 CCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG 177
Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQAL 352
           + HL + P ++ +  P GR   L DFGL   + + G     E D RY+   L
Sbjct: 178 LVHLDVKPANIFLG-PRGR-CKLGDFGLLVELGTAGAGEVQEGDPRYMAPEL 227

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 33/171 (19%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLH 246
           E G+ V    +H   R+     A K++  K N   S  ++   E +++ Q+ H ++++L+
Sbjct: 35  EFGKVVKATAFHLKGRAGYTTVAVKML--KENASPSELRDLLSEFNVLKQVNHPHVIKLY 92
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQS-------------------------YYTEYD 281
            +        +I E A  G L     R+S                           T  D
Sbjct: 93  GACSQDGPLLLIVEYAKYGSL-RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGD 151
Query: 282 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           +  +  Q+  G+ Y+  +S+ H  L   ++LVA   GR + ++DFGLSR +
Sbjct: 152 LISFAWQISQGMQYLAEMSLVHRDLAARNILVAE--GRKMKISDFGLSRDV 200

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRLHD 247
           ++G G  G          GR Y  K +  +   ++ +   + E+ ++  + H N+V+  +
Sbjct: 31  KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 248 SYETKDSFTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
           S+E   S  I+ +   GG+L   +  Q    + E  I  +  Q+   L ++H   I H  
Sbjct: 91  SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRD 150
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           +   ++ +   G   + L DFG++R + S
Sbjct: 151 IKSQNIFLTKDG--TVQLGDFGIARVLNS 177

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + D+GL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDYGLAR 173

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 77/183 (42%), Gaps = 25/183 (13%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK---VMTGKGNQYKSLFKNELDIMNQLC 238
           T  Y+   E+G G  G VY A +  SG   A K   V  G+     S  + E+ ++ +L 
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLE 61
Query: 239 ---HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD-----------IAH 284
              H N+VRL D   T  +   I        L+     Q   T  D           I  
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKV-----TLVFEHVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYD 344
            +RQ L GLD++H   I H  L P ++LV    G  + L DFGL+R  +    L+P+   
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVT--SGGTVKLADFGLARIYSYQMALDPVVVT 174
Query: 345 VRY 347
           + Y
Sbjct: 175 LWY 177

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMN 235
           + D Y     +GRG  G VY A ++++ +N A K +      ++ L        E+ I+N
Sbjct: 24  VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVN---RMFEDLIDCKRILREITILN 80
Query: 236 QLCHRNLVRLH-----DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           +L    ++RL+     D     D   I+ E+A   +L        + TE  I   +  LL
Sbjct: 81  RLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA-DSDLKKLFKTPIFLTEEHIKTILYNLL 139
Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            G +++H   I H  L P + L+       + + DFGL+R I S
Sbjct: 140 LGENFIHESGIIHRDLKPANCLLNQDCS--VKVCDFGLARTINS 181

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 955  VLDGLQYLHWRG--LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
            V  G+ YLH R   + H N++  N+++   +   VK+ D G + R+     L        
Sbjct: 146  VAKGMNYLHNRNPPIVHRNLKSPNLLVD--KKYTVKVCDFGLS-RLKASTFLSSKSAAGT 202
Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            PE+ APEVL +EP   ++DV+S GV+ + L +   P+   +  +    V F   R E
Sbjct: 203  PEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE 259

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE 250
           LG G  G+V+ AV+    +  A K +     Q       E+ I+ +L H N+V++ +   
Sbjct: 19  LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEIL- 77
Query: 251 TKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH--------------YIRQLLSGLDYM 296
              S + +++  G    L+S+     Y E D+A+              ++ QLL GL Y+
Sbjct: 78  -GPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYI 136
Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           H  ++ H  L P +L + +     L + DFGL+R
Sbjct: 137 HSANVLHRDLKPANLFI-NTEDLVLKIGDFGLAR 169

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            + V  +L GL+Y+H  G+ H +++P NV  A     +++++D G  ++  +  T      
Sbjct: 127  FLVYQLLRGLKYIHSAGIIHRDLKPSNV--AVNEDCELRILDFGLARQADEEMTGY---- 180
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
                 + APE++     + QT D+WS G +   LL G + F G
Sbjct: 181  VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 223

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHD 247
           D LG+G T  V+    + +G  +A KV       +   +   E +++ +L H+N+V+L  
Sbjct: 15  DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 248 SYE--TKDSFTIISELAGGGELLHSLTRQSY---YTEYDIAHYIRQLLSGLDYMHRLSIA 302
             E  T     +I E    G L   L   S      E +    +R ++ G++++    I 
Sbjct: 75  IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 303 HLGLTPGDLL--VAHPGGRHLLLTDFGLSRRI 332
           H  + PG+++  +   G     LTDFG +R +
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +  +    A + ++   +Q Y      E+ I+ +  H N++ ++D  
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +  + +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 95  RAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 152
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 153 DLKPSNLLLNTTCD--LKICDFGLAR 176

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHD 247
           D LG+G T  V+    + +G  +A KV       +   +   E +++ +L H+N+V+L  
Sbjct: 15  DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 248 SYE--TKDSFTIISELAGGGELLHSLTRQSY---YTEYDIAHYIRQLLSGLDYMHRLSIA 302
             E  T     +I E    G L   L   S      E +    +R ++ G++++    I 
Sbjct: 75  IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 303 HLGLTPGDLL--VAHPGGRHLLLTDFGLSRRI 332
           H  + PG+++  +   G     LTDFG +R +
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHD-- 247
           +G G  G+V  A +       A K ++   +Q Y      E+ I+ +  H N++ + D  
Sbjct: 51  IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 248 ---SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
              + E      I+ +L      L+ L +    +   I +++ Q+L GL Y+H  ++ H 
Sbjct: 111 RASTLEAMRDVYIVQDLMETD--LYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHR 168
Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSR 330
            L P +LL+       L + DFGL+R
Sbjct: 169 DLKPSNLLINTTCD--LKICDFGLAR 192

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 187 FGDELGRGVTGIVYHAVERSSGR-----NYAAKVM--TGKGNQYKSLFKNELDIMNQLC- 238
           FG  LG G  G V  A     G+       A K++  T   ++ ++L  +EL IM+ L  
Sbjct: 50  FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM-SELKIMSHLGQ 108
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIA--------------H 284
           H N+V L  +        +I+E    G+LL+ L R+S   E D A              H
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           +  Q+  G+ ++   +  H  +   ++L+ +  G    + DFGL+R I +
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTN--GHVAKIGDFGLARDIMN 216

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 187 FGDELGRGVTGIVYHAVERSSGR-----NYAAKVM--TGKGNQYKSLFKNELDIMNQLC- 238
           FG  LG G  G V  A     G+       A K++  T   ++ ++L  +EL IM+ L  
Sbjct: 50  FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM-SELKIMSHLGQ 108
Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIA--------------H 284
           H N+V L  +        +I+E    G+LL+ L R+S   E D A              H
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           +  Q+  G+ ++   +  H  +   ++L+ +  G    + DFGL+R I +
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTN--GHVAKIGDFGLARDIMN 216

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+      GK
Sbjct: 125 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 182
Query: 338 LNPLEYDVRYVRQALRHPWL 357
               EY+VR   +  + P L
Sbjct: 183 ----EYNVRVASRYFKGPEL 198

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+
Sbjct: 125 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 175

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            + V  +L GL+Y+H  G+ H +++P NV  A     +++++D G  ++  +  T      
Sbjct: 135  FLVYQLLRGLKYIHSAGIIHRDLKPSNV--AVNEDSELRILDFGLARQADEEMTGY---- 188
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
                 + APE++     + QT D+WS G +   LL G + F G
Sbjct: 189  VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 231

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 12/148 (8%)
Query: 191 LGRGVTGIVYHAVER-SSGRN---YAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           +G G  G VY  + + SSG+     A K +  G   + +  F  E  IM Q  H N++RL
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 246 HDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
                      II+E    G L   L  +   ++   +   +R + +G+ Y+  ++  H 
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHR 171
Query: 305 GLTPGDLLVAHPGGRHLL--LTDFGLSR 330
            L   ++LV      +L+  ++DFGLSR
Sbjct: 172 DLAARNILV----NSNLVCKVSDFGLSR 195

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+      GK
Sbjct: 124 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 181
Query: 338 LNPLEYDVRYVRQALRHPWL 357
               EY+VR   +  + P L
Sbjct: 182 ----EYNVRVASRYFKGPEL 197

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+
Sbjct: 124 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 174

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+      GK
Sbjct: 124 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 181
Query: 338 LNPLEYDVRYVRQALRHPWL 357
               EY+VR   +  + P L
Sbjct: 182 ----EYNVRVASRYFKGPEL 197

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+
Sbjct: 124 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 174

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+      GK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 180
Query: 338 LNPLEYDVRYVRQALRHPWL 357
               EY+VR   +  + P L
Sbjct: 181 ----EYNVRVASRYFKGPEL 196

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 173

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+      GK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 180
Query: 338 LNPLEYDVRYVRQALRHPWL 357
               EY+VR   +  + P L
Sbjct: 181 ----EYNVRVASRYFKGPEL 196

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 173

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+      GK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 180
Query: 338 LNPLEYDVRYVRQALRHPWL 357
               EY+VR   +  + P L
Sbjct: 181 ----EYNVRVASRYFKGPEL 196

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 173

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+      GK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 180
Query: 338 LNPLEYDVRYVRQALRHPWL 357
               EY+VR   +  + P L
Sbjct: 181 ----EYNVRVASRYFKGPEL 196

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 173

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            + V  +L GL+Y+H  G+ H +++P NV  A     +++++D G  ++  +  T      
Sbjct: 135  FLVYQLLRGLKYIHSAGIIHRDLKPSNV--AVNEDSELRILDFGLARQADEEMTGY---- 188
Query: 1010 TPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRG 1051
                 + APE++     + QT D+WS G +   LL G + F G
Sbjct: 189  VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 231

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 70/166 (42%), Gaps = 25/166 (15%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK---VMTGKGNQYKSLFKNELDIMNQLC 238
           T  Y+   E+G G  G VY A +  SG   A K   V  G+     S  + E+ ++ +L 
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLE 61
Query: 239 ---HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD-----------IAH 284
              H N+VRL D   T  +   I        L+     Q   T  D           I  
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKV-----TLVFEHVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            +RQ L GLD++H   I H  L P ++LV    G  + L DFGL+R
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVT--SGGTVKLADFGLAR 160

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+      GK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 180
Query: 338 LNPLEYDVRYVRQALRHPWL 357
               EY+VR   +  + P L
Sbjct: 181 ----EYNVRVASRYFKGPEL 196

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 173

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 70/166 (42%), Gaps = 25/166 (15%)
Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK---VMTGKGNQYKSLFKNELDIMNQLC 238
           T  Y+   E+G G  G VY A +  SG   A K   V  G+     S  + E+ ++ +L 
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLE 61
Query: 239 ---HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD-----------IAH 284
              H N+VRL D   T  +   I        L+     Q   T  D           I  
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKV-----TLVFEHVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            +RQ L GLD++H   I H  L P ++LV    G  + L DFGL+R
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVT--SGGTVKLADFGLAR 160

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+      GK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 180
Query: 338 LNPLEYDVRYVRQALRHPWL 357
               EY+VR   +  + P L
Sbjct: 181 ----EYNVRVASRYFKGPEL 196

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 173

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 955  VLDGLQYLHWRG--LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
            V  G+ YLH R   + H +++  N+++   +   VK+ D G + R+     L        
Sbjct: 146  VAKGMNYLHNRNPPIVHRDLKSPNLLVD--KKYTVKVCDFGLS-RLKASXFLXSKXAAGT 202
Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
            PE+ APEVL +EP   ++DV+S GV+ + L +   P+   +  +    V F   R E
Sbjct: 203  PEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE 259

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+      GK
Sbjct: 144 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA-EFYHPGK 201
Query: 338 LNPLEYDVRYVRQALRHPWL 357
               EY+VR   +  + P L
Sbjct: 202 ----EYNVRVASRYFKGPEL 217

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
           T+YDI +YI +LL  LDY H   I H  + P ++++ H   R L L D+GL+
Sbjct: 144 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLA 194

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 11/147 (7%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAA-KVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLH 246
           +G G  G V     ++ G+  +   + T KG    + +  F +E  IM Q  H N++RL 
Sbjct: 24  IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
                     I++E    G L   L      +T   +   +R + SG+ Y+  +S  H  
Sbjct: 84  GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRD 143
Query: 306 LTPGDLLVAHPGGRHLL--LTDFGLSR 330
           L   ++LV      +L+  ++DFGLSR
Sbjct: 144 LAARNILV----NSNLVCKVSDFGLSR 166

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L +  FGL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILGFGLAR 173

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 7/145 (4%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAA-KVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLH 246
           +G G  G V     ++ G+  +   + T KG    + +  F +E  IM Q  H N++RL 
Sbjct: 22  IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
                     I++E    G L   L      +T   +   +R + SG+ Y+  +S  H  
Sbjct: 82  GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRD 141
Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSR 330
           L   ++LV         ++DFGLSR
Sbjct: 142 LAARNILVNS--NLVCKVSDFGLSR 164

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 945  THKDAYCVT-SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
            T +D  C    V  G+++L ++   H ++   NV++   + V  K+ D G  + +     
Sbjct: 170  TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVV--KICDFGLARDIMSDSN 227
Query: 1004 LIHPINTPNP-EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
             +   N   P ++ APE L E     ++DVWS G+L + + S G +P+ G
Sbjct: 228  YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + DF L+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDFYLAR 173

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 33/171 (19%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLH 246
           E G+ V    +H   R+     A K++  K N   S  ++   E +++ Q+ H ++++L+
Sbjct: 35  EFGKVVKATAFHLKGRAGYTTVAVKML--KENASPSELRDLLSEFNVLKQVNHPHVIKLY 92
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQS-------------------------YYTEYD 281
            +        +I E A  G L     R+S                           T  D
Sbjct: 93  GACSQDGPLLLIVEYAKYGSL-RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGD 151
Query: 282 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           +  +  Q+  G+ Y+  + + H  L   ++LVA   GR + ++DFGLSR +
Sbjct: 152 LISFAWQISQGMQYLAEMKLVHRDLAARNILVAE--GRKMKISDFGLSRDV 200

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            + +  +L  L Y H +G+ H +++P N VM   +  +++LID G       L    HP  
Sbjct: 136  FYMYELLKALDYCHSKGIMHRDVKPHN-VMIDHQQKKLRLIDWG-------LAEFYHPAQ 187
Query: 1010 TPNPE-----FAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
              N       F  PE+L +  ++  + D+WS G +   ++    PF
Sbjct: 188  EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 233

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 33/171 (19%)
Query: 190 ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---ELDIMNQLCHRNLVRLH 246
           E G+ V    +H   R+     A K++  K N   S  ++   E +++ Q+ H ++++L+
Sbjct: 35  EFGKVVKATAFHLKGRAGYTTVAVKML--KENASPSELRDLLSEFNVLKQVNHPHVIKLY 92
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQS-------------------------YYTEYD 281
            +        +I E A  G L     R+S                           T  D
Sbjct: 93  GACSQDGPLLLIVEYAKYGSL-RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGD 151
Query: 282 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           +  +  Q+  G+ Y+  + + H  L   ++LVA   GR + ++DFGLSR +
Sbjct: 152 LISFAWQISQGMQYLAEMKLVHRDLAARNILVAE--GRKMKISDFGLSRDV 200

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            + +  +L  L Y H +G+ H +++P N VM   +  +++LID G       L    HP  
Sbjct: 141  FYMYELLKALDYCHSKGIMHRDVKPHN-VMIDHQQKKLRLIDWG-------LAEFYHPAQ 192
Query: 1010 TPNPE-----FAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
              N       F  PE+L +  ++  + D+WS G +   ++    PF
Sbjct: 193  EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 238

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
            V  G+++L  R   H ++   N+++ S ++V VK+ D G  + + K    +   +   P 
Sbjct: 148  VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
            ++ APE + +     Q+DVWS GVL + + S GASP+ G
Sbjct: 206  KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
            V  G+++L  R   H ++   N+++ S ++V VK+ D G  + + K    +   +   P 
Sbjct: 148  VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
            ++ APE + +     Q+DVWS GVL + + S GASP+ G
Sbjct: 206  KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + D GL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDAGLAR 173

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
            V  G+++L  R   H ++   N+++ S ++V VK+ D G  + + K    +   +   P 
Sbjct: 200  VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
            ++ APE + +     Q+DVWS GVL + + S GASP+ G
Sbjct: 258  KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 296

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 448 GPDVKTWEDNVPN---RGPGGELLH---SLTRQSY--YTEYDIAHYIRQLLSGLDYMHRL 499
           GP++ T  D V +   R P     H   +  +Q Y   T+YDI  Y+ ++L  LDY H +
Sbjct: 91  GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 500 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 529
            I H  + P ++L+ H   R L L D+GL+
Sbjct: 151 GIMHRDVKPHNVLIDHE-HRKLRLIDWGLA 179

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
            V  G+++L  R   H ++   N+++ S ++V VK+ D G  + + K    +   +   P 
Sbjct: 209  VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
            ++ APE + +     Q+DVWS GVL + + S GASP+ G
Sbjct: 267  KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 305

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 24/157 (15%)
Query: 189 DELGRGVTG-IVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLVRLH 246
           D LG G  G IVY  +     R+ A K +     +  S    E+ ++ +   H N++R  
Sbjct: 30  DVLGHGAEGTIVYRGM--FDNRDVAVKRIL---PECFSFADREVQLLRESDEHPNVIRYF 84
Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHY-------IRQLLSGLDYMHRL 299
            + + +    I  EL          T Q Y  + D AH        ++Q  SGL ++H L
Sbjct: 85  CTEKDRQFQYIAIELCAA-------TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL 137
Query: 300 SIAHLGLTPGDLLVAHP---GGRHLLLTDFGLSRRIT 333
           +I H  L P ++L++ P   G    +++DFGL +++ 
Sbjct: 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 468 LHSLTRQSYYTEYDIAHY-------IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP---G 517
           L + T Q Y  + D AH        ++Q  SGL ++H L+I H  L P ++L++ P   G
Sbjct: 99  LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHG 158
Query: 518 GRHLLLTDFGLSRRIT 533
               +++DFGL +++ 
Sbjct: 159 KIKAMISDFGLCKKLA 174

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 13/118 (11%)
Query: 224 KSLFKNELDIMNQLCHRNLVRLHDSY--ETKDSFTIISELAGGGELLHSLTR----QSYY 277
           K +  +E++++ +L H N+VR +D     T  +  I+ E   GG+L   +T+    + Y 
Sbjct: 49  KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 278 TEYDIAHYIRQLLSGLDYMHRLS-----IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            E  +   + QL   L   HR S     + H  L P ++ +   G +++ L DFGL+R
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL--DGKQNVKLGDFGLAR 164

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
            V  G+++L  R   H ++   N+++ S ++V VK+ D G  + + K    +   +   P 
Sbjct: 207  VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
            ++ APE + +     Q+DVWS GVL + + S GASP+ G
Sbjct: 265  KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 303

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
            V  G+++L  R   H ++   N+++ S ++V VK+ D G  + + K    +   +   P 
Sbjct: 202  VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
            ++ APE + +     Q+DVWS GVL + + S GASP+ G
Sbjct: 260  KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 298

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
            V  G+++L  R   H ++   N+++ S ++V VK+ D G  + + K    +   +   P 
Sbjct: 157  VAKGMEFLASRKXIHRDLAARNILL-SEKNV-VKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
            ++ APE + +     Q+DVWS GVL + + S GASP+ G
Sbjct: 215  KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
            V  G+++L  R   H ++   N+++ S ++V VK+ D G  + + K    +   +   P 
Sbjct: 157  VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
            ++ APE + +     Q+DVWS GVL + + S GASP+ G
Sbjct: 215  KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
            V  G+++L  R   H ++   N+++ S ++V VK+ D G  + + K    +   +   P 
Sbjct: 157  VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
            ++ APE + +     Q+DVWS GVL + + S GASP+ G
Sbjct: 215  KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + D GL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDRGLAR 173

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
            + +  +L  L Y H  G+ H +++P N VM      +++LID G       L    HP  
Sbjct: 135  FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
               +   +  F  PE+L +  ++  + D+WS G +   ++    PF
Sbjct: 187  EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
            V  G+++L  R   H ++   N+++ S ++V VK+ D G  + + K    +   +   P 
Sbjct: 148  VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
            ++ APE + +     Q+DVWS GVL + + S GASP+ G
Sbjct: 206  KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
            + +  +L  L Y H  G+ H +++P N VM      +++LID G       L    HP  
Sbjct: 135  FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
               +   +  F  PE+L +  ++  + D+WS G +   ++    PF
Sbjct: 187  EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK-----NELDIMNQLCHRNLVRL 245
           +G G  G V  A +  +G   A K ++     ++S+        EL ++  + H N++ L
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 246 HD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            D      S E  +   +++ L G    L+++ +    T+  +   I Q+L GL Y+H  
Sbjct: 87  LDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            I H  L P +L V       L + D GL+R
Sbjct: 145 DIIHRDLKPSNLAVNEDC--ELKILDGGLAR 173

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
            + +  +L  L Y H  G+ H +++P N VM      +++LID G       L    HP  
Sbjct: 135  FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
               +   +  F  PE+L +  ++  + D+WS G +   ++    PF
Sbjct: 187  EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 30/131 (22%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVV---------MASVRSVQ-------------- 986
            YC+  +L  L YL    L H +++P+N++         + +VR V               
Sbjct: 142  YCI-EILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTG 200
Query: 987  VKLIDLGC-TQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSG 1045
            +KLID GC T +    G++I+       ++ APEV+        +D+WS G +   L +G
Sbjct: 201  IKLIDFGCATFKSDYHGSIIN-----TRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
Query: 1046 ASPFRGQSEPE 1056
            +  FR     E
Sbjct: 256  SLLFRTHEHME 266

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
            + +  +L  L Y H  G+ H +++P N VM      +++LID G       L    HP  
Sbjct: 135  FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
               +   +  F  PE+L +  ++  + D+WS G +   ++    PF
Sbjct: 187  EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
            + +  +L  L Y H  G+ H +++P N VM      +++LID G       L    HP  
Sbjct: 134  FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 185
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
               +   +  F  PE+L +  ++  + D+WS G +   ++    PF
Sbjct: 186  EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
            + +  +L  L Y H  G+ H +++P N VM      +++LID G       L    HP  
Sbjct: 135  FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
               +   +  F  PE+L +  ++  + D+WS G +   ++    PF
Sbjct: 187  EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
            + +  +L  L Y H  G+ H +++P N VM      +++LID G       L    HP  
Sbjct: 134  FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 185
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
               +   +  F  PE+L +  ++  + D+WS G +   ++    PF
Sbjct: 186  EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
            + +  +L  L Y H  G+ H +++P N VM      +++LID G       L    HP  
Sbjct: 133  FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 184
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
               +   +  F  PE+L +  ++  + D+WS G +   ++    PF
Sbjct: 185  EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 230

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
            + +  +L  L Y H  G+ H +++P N VM      +++LID G       L    HP  
Sbjct: 135  FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
               +   +  F  PE+L +  ++  + D+WS G +   ++    PF
Sbjct: 187  EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-- 1007
            + +  +L  L Y H  G+ H +++P N VM      +++LID G       L    HP  
Sbjct: 135  FYMYEILKALDYCHSMGIMHRDVKPHN-VMIDHEHRKLRLIDWG-------LAEFYHPGQ 186
Query: 1008 ---INTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPF 1049
               +   +  F  PE+L +  ++  + D+WS G +   ++    PF
Sbjct: 187  EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
            V  G+++L  R   H ++   N+++ S ++V VK+ D G  + + K    +   +   P 
Sbjct: 148  VAKGMEFLASRKCIHRDLAARNILL-SEKNV-VKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRG 1051
            ++ APE + +     Q+DVWS GVL + + S GASP+ G
Sbjct: 206  KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	1310
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-55
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-29
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	6e-22
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-17
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-14
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-11
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-52
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-28
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-21
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-17
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	8e-11
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-08
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-51
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	3e-29
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-20
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	3e-17
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	3e-12
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-09
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	5e-51
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-28
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-21
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-16
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	8e-13
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-10
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-06
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-50
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	4e-28
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	5e-22
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-17
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-11
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-11
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	6e-50
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	4e-28
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-22
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	8e-17
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-11
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	4e-11
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	9e-50
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	7e-28
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	6e-22
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-16
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-11
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-11
3bhy_A	283	Death-associated protein kinase 3; death associate	8e-49
3bhy_A	283	Death-associated protein kinase 3; death associate	4e-28
3bhy_A	283	Death-associated protein kinase 3; death associate	4e-21
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-17
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-10
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-10
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	7e-43
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-18
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	8e-15
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-13
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-08
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-07
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	6e-42
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-16
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-12
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-11
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	6e-10
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	7e-08
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	9e-42
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-19
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-13
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-13
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-09
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-07
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-41
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-27
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	6e-22
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-13
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	5e-08
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-06
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	5e-41
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-19
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-15
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	9e-13
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-08
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-07
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	6e-41
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-17
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-12
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-12
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	6e-09
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-06
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-40
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-18
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	6e-14
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-11
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	9e-09
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	9e-09
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-40
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-18
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-14
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-12
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	4e-08
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-40
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-17
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-12
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-12
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-09
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-06
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	7e-40
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-18
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	7e-15
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-12
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-10
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-07
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	8e-40
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	6e-21
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-15
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-10
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-08
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	8e-08
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-39
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	7e-19
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	5e-15
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	8e-12
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-11
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-07
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-39
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	8e-19
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	6e-15
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-11
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-11
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-07
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-38
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-18
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-15
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-11
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-10
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-07
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-38
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-15
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-12
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-10
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	6e-08
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	6e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-38
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-15
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	6e-13
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	6e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-05
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-05
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	7e-38
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	6e-17
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-11
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-11
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-07
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	4e-07
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-37
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-14
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	8e-12
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-10
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	8e-09
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-06
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-37
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-16
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-13
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-09
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-06
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-05
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	7e-37
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-14
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	9e-12
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-10
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-08
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	4e-06
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-36
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-15
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	6e-11
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-10
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-07
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	6e-07
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-36
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-22
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-15
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	8e-12
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-11
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	3e-08
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-34
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	6e-17
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-11
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	5e-10
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-08
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-06
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	8e-33
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-15
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-11
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-10
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-08
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-04
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-31
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-11
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-09
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-08
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-07
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-05
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-31
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-14
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-10
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-09
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-09
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-04
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-31
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	8e-17
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	5e-11
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-09
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	8e-07
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	7e-05
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-29
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-15
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-13
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-11
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	9e-06
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-29
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-15
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-13
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	4e-11
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-29
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-14
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	7e-12
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-11
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	8e-04
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-28
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	7e-15
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-12
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-09
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-28
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-15
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-12
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-10
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	4e-28
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-12
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-09
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	5e-09
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-07
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-28
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-15
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-11
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-10
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-07
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	6e-28
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	8e-11
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-09
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-09
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	8e-08
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-27
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-12
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-09
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	6e-09
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-07
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-27
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-11
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	7e-10
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-07
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-26
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-14
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-10
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-10
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-26
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	9e-09
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-08
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	6e-26
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-12
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-09
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-08
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-06
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-26
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-14
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-07
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	8e-06
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	8e-26
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-10
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	9e-26
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-10
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	9e-09
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-06
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-05
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-25
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-09
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-04
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-24
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-06
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	5e-06
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-24
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-11
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-08
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	5e-07
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-24
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-14
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-10
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-07
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-24
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-15
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-12
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-08
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-24
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-09
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-04
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	7e-04
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-23
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	8e-13
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-10
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-07
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-23
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-09
2a19_B	284	Interferon-induced, double-stranded RNA-activated	7e-08
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-05
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-23
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-10
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-08
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-06
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-23
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-09
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-07
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-06
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	5e-06
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	4e-23
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-12
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-08
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	8e-08
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-22
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	6e-13
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	5e-10
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-06
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-22
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	8e-13
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-10
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-07
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-22
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-10
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	8e-10
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-04
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-22
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	9e-07
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-04
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-04
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	6e-22
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-11
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	7e-10
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-06
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	7e-22
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	9e-08
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-06
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-21
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-06
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	9e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-21
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-07
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-04
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	6e-04
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-21
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-09
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-05
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-05
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-21
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-11
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-09
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-06
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-21
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-06
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	9e-04
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-21
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-12
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	9e-10
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	4e-07
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-21
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	7e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-05
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-20
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-13
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	4e-09
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-06
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	6e-20
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-13
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-09
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-19
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-08
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-05
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-19
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-08
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	5e-08
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-19
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-06
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-05
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-19
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-13
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-09
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	8e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	5e-19
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-07
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-06
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-19
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-08
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-18
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-07
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-04
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-18
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	6e-08
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-04
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-18
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-14
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-07
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-07
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-17
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-15
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-08
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-07
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-04
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-16
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-06
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-16
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-08
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-06
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	4e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-16
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-08
2dyl_A	318	Dual specificity mitogen-activated protein kinase	8e-16
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-15
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	8e-13
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-04
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-04
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-15
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	6e-09
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	9e-07
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-04
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	3e-15
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	4e-15
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	3e-08
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-06
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	4e-15
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	8e-08
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-07
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-05
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	4e-15
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-06
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-06
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	9e-15
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-13
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-06
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-05
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-14
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-14
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-05
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-14
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-11
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-08
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-04
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-14
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-10
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-06
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-04
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-14
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-04
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-14
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	4e-09
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-06
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	4e-05
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-14
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-06
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-14
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-05
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-14
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	7e-05
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	7e-14
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-10
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-07
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-06
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-13
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-13
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-06
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-13
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-13
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-09
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	4e-07
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-05
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-13
3fme_A	290	Dual specificity mitogen-activated protein kinase;	6e-04
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	3e-13
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	9e-09
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-07
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-06
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-13
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-05
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	3e-13
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	6e-06
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	7e-05
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	7e-04
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	5e-13
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-05
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	9e-13
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-11
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-07
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-12
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-05
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-12
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-05
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-12
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-09
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	8e-06
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-05
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-12
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-05
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-12
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	5e-10
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-12
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-10
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	4e-07
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	6e-06
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-12
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-09
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-05
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-05
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-12
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-12
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	9e-11
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-07
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-05
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-12
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-12
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	4e-06
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	3e-12
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-12
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	5e-06
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-12
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-04
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-11
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	9e-09
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-07
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-06
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-11
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-10
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-07
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-11
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-05
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-11
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-04
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-11
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	9e-06
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-11
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-04
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-11
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-11
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-06
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	5e-06
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	9e-05
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-11
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-09
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-07
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-05
3niz_A	311	Rhodanese family protein; structural genomics, str	4e-11
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-05
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	4e-11
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	5e-11
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	4e-04
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-11
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	7e-11
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	8e-11
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-04
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	8e-11
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	8e-11
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	9e-08
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	9e-11
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-10
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-05
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-10
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-05
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-10
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-10
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-10
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-10
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-10
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-10
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	4e-10
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	4e-10
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	4e-10
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	5e-10
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	5e-10
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	6e-10
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	6e-10
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	6e-10
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	6e-10
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	7e-10
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	7e-10
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	9e-06
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	7e-10
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-10
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	8e-10
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	8e-10
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-09
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-06
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-09
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-09
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-09
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-09
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-09
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-09
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-09
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-09
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-09
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-07
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-09
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-09
3q4u_A	301	Activin receptor type-1; structural genomics conso	5e-09
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	5e-09
3soc_A	322	Activin receptor type-2A; structural genomics cons	5e-09
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	6e-09
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-08
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-08
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-08
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-08
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-08
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-08
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-08
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	2e-08
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-08
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-08
3qr2_A	137	Basigin; CD147, EMMPRIN, immunoglobulin-like domai	3e-08
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	5e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	8e-07
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-04
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-04
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	5e-08
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	7e-08
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-07
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	8e-08
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	9e-08
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	1e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	4e-07
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	2e-07
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-07
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	4e-06
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	2e-07
2dm3_A	110	KIAA0992 protein, palladin; beta-sandwich, myopall	3e-07
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	3e-07
3irg_A	100	Titin; IG-like, titin, OBSL1, complex, alternative	3e-07
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	4e-07
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	4e-07
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	8e-06
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	6e-05
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	1e-04
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	8e-04
2r15_A	212	Myomesin-1; sarcomeric protein, IG-like domains, h	4e-07
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-07
1wit_A	93	Twitchin 18TH IGSF module; immunoglobulin superfam	5e-07
1nct_A	106	Titin; cell adhesion, glycoprotein, transmembrane,	6e-07
2eo9_A	118	Roundabout homolog 1; beta-sandwich, IG-fold, H-RO	8e-07
2j8h_A	197	Titin, connectin; cardiomyopathy, nuclear protein,	9e-07
2j8h_A	197	Titin, connectin; cardiomyopathy, nuclear protein,	3e-06
2a38_A	194	Titin; Z1Z2, structural protein; 2.00A {Homo sapie	9e-07
2a38_A	194	Titin; Z1Z2, structural protein; 2.00A {Homo sapie	4e-06
2iep_A	192	Muscle-specific kinase receptor; beta-sandwich, si	9e-07
2iep_A	192	Muscle-specific kinase receptor; beta-sandwich, si	3e-05
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-06
2cqv_A	114	MLCK, myosin light chain kinase, smooth muscle and	1e-06
2edj_A	100	Roundabout homolog 2; KIAA1568 protein, beta sandw	1e-06
2ens_A	96	Advanced glycosylation END product-specific recept	1e-06
2yd1_A	212	Tyrosine-protein phosphatase LAR; hydrolase; 1.80A	1e-06
2yd1_A	212	Tyrosine-protein phosphatase LAR; hydrolase; 1.80A	1e-05
2y25_A	317	Myomesin; structural protein, sarcomere, M-BAND, i	1e-06
3irg_B	107	Obscurin-like protein 1; IG-like, titin, OBSL1, co	1e-06
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	1e-06
3kvq_A	108	Vascular endothelial growth factor receptor 2; veg	1e-06
2kkq_A	116	Myotilin; unknown function, actin-binding, cell me	2e-06
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-06
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	2e-06
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-06
3lcy_A	197	Titin; A-BAND, IG tandem domains, ATP-binding, cal	2e-06
3lcy_A	197	Titin; A-BAND, IG tandem domains, ATP-binding, cal	1e-04
2crz_A	110	Fibronectin type-III domain containing protein 3A;	2e-06
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	2e-06
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-06
2yr3_A	99	Myosin light chain kinase, smooth muscle; IG domai	3e-06
3k0w_A	218	Mucosa-associated lymphoid tissue lymphoma translo	3e-06
3k0w_A	218	Mucosa-associated lymphoid tissue lymphoma translo	3e-05
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	3e-06
2dm2_A	110	Palladin; beta-sandwich, KIAA0992, actin-associate	3e-06
1epf_A	191	NCAM, protein (neural cell adhesion molecule); imm	3e-06
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	3e-06
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	4e-06
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	4e-06
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	4e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-06
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	4e-06
2v5t_A	189	NCAM2, N-CAM 2, neural cell adhesion molecule 2; p	5e-06
2v5t_A	189	NCAM2, N-CAM 2, neural cell adhesion molecule 2; p	4e-04
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	5e-06
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	5e-06
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	3e-05
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	6e-06
2v44_A	189	NCAM2, neural cell adhesion molecule 2; phosphoryl	6e-06
2v44_A	189	NCAM2, neural cell adhesion molecule 2; phosphoryl	1e-05
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	6e-06
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	6e-06
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	6e-05
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	7e-05
3qp3_A	103	Titin; I-SET IG-like, sarcomere, M-BAND, transfera	6e-06
2kdg_A	100	Myotilin; immonoglobulin domain, actin-binding, st	6e-06
3puc_A	99	Titin; I-SET IG-like domain, M-BAND, transferase;	7e-06
1rhf_A	182	Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3	7e-06
1rhf_A	182	Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3	1e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	7e-06
3bfo_A	91	Mucosa-associated lymphoid tissue lymphoma translo	8e-06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	9e-06
1fhg_A	154	Telokin; immunoglobulin fold, beta barrel, contrac	9e-06
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	1e-05
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	1e-05
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	2e-05
1u2h_A	99	APEG-1, aortic preferentially expressed protein 1;	1e-05
2yd6_A	212	PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sa	1e-05
2yd6_A	212	PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sa	4e-05
1g1c_A	99	Immunoglobulin-like domain I1 from titin; immunogl	1e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-05
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	2e-05
3s97_C	201	Contactin-1; carbonic anhdyrase like immunoglobuli	2e-05
2wv3_A	190	Neuroplastin; igcam, membrane, glycoprotein, cell	2e-05
2v9r_A	212	Roundabout homolog 1; proto-oncogene, differentiat	2e-05
2v9r_A	212	Roundabout homolog 1; proto-oncogene, differentiat	3e-04
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	4e-04
2vr9_A	217	Roundabout 1, ROBO; immunoglobulin-like domain, AX	2e-05
2vr9_A	217	Roundabout 1, ROBO; immunoglobulin-like domain, AX	3e-04
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	3e-05
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	6e-04
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-05
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-05
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	3e-05
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	1e-04
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	3e-05
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	3e-05
3grw_A	241	Fibroblast growth factor receptor 3; FGFR3, protei	3e-05
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	3e-05
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	3e-04
2v9t_A	117	Roundabout homolog 1; structural protein-receptor	3e-05
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	3e-05
2dav_A	126	SLOW MYBP-C, myosin-binding protein C, SLOW-type;	3e-05
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	4e-05
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	4e-05
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	4e-05
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	9e-05
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	6e-04
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	4e-05
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	1e-04
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	5e-05
3caf_A	100	Fibroblast growth factor receptor 2; FGFR2, D2, AT	5e-05
1qz1_A	291	Neural cell adhesion molecule 1, 140 kDa isoform;	6e-05
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	6e-05
1ry7_B	334	FGFR-3, fibroblast growth factor receptor 3; FGF-F	7e-05
1ry7_B	334	FGFR-3, fibroblast growth factor receptor 3; FGF-F	1e-04
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	8e-05
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	9e-05
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	2e-04
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	7e-04
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	9e-05
2va4_A	192	NCAM2, N-CAM 2, neural cell adhesion molecule 2; t	9e-05
2va4_A	192	NCAM2, N-CAM 2, neural cell adhesion molecule 2; t	3e-04
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	9e-05
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	1e-04
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	2e-04
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	1e-04
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	1e-04
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	1e-04
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-04
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	1e-04
3ojm_B	231	Fibroblast growth factor receptor 2; beta trefoil	1e-04
3ojm_B	231	Fibroblast growth factor receptor 2; beta trefoil	1e-04
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-04
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	1e-04
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	2e-04
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	2e-04
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-04
2y23_A	312	Myomesin; structural protein, sarcomere, M-BAND, i	2e-04
2cr3_A	99	Basic fibroblast growth factor receptor 1; IG fold	2e-04
3qs7_E	423	FL cytokine receptor; immunoglobulin-like domain,	3e-04
1gxe_A	139	Myosin binding protein C, cardiac-type; cytoskelet	3e-04
1f97_A	212	Junction adhesion molecule; immunoglobulin superfa	3e-04
3cx2_A	108	Myosin-binding protein C, cardiac-type; protonatio	3e-04
1nbq_A	209	JAM, junctional adhesion molecule 1, PAM-1; reovir	3e-04
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-04
2c5d_C	195	AXL oncogene, tyrosine-protein kinase receptor UFO	3e-04
3mjg_X	289	Beta-type platelet-derived growth factor receptor;	4e-04
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	4e-04
1itb_B	315	Type 1 interleukin-1 receptor; immunoglobulin fold	5e-04
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	7e-04
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	7e-04
2ch8_A	201	BARF1, P33, 33 kDa early protein; viral protein, i	8e-04

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  197 bits (502), Expect = 2e-55
 Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 1/177 (0%)

Query: 157 EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 216
           + ++           + V+ +   + D YD  +ELG G  G+V+  VE+++GR + AK +
Sbjct: 25  DYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI 84

Query: 217 TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY 276
                  K   KNE+ IMNQL H  L+ LHD++E K    +I E   GGEL   +  + Y
Sbjct: 85  NTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY 144

Query: 277 -YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
             +E ++ +Y+RQ   GL +MH  SI HL + P +++        + + DFGL+ ++
Sbjct: 145 KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  119 bits (301), Expect = 5e-29
 Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 17/139 (12%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-------TKL 1001
               +    +GL+++H   + HL+I+P+N++  + ++  VK+ID G   ++          
Sbjct: 152  INYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT 211

Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
             T          EFAAPE++  EP+   TD+W+ GVL YVLLSG SPF G+ + ET QNV
Sbjct: 212  AT---------AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV 262

Query: 1062 NFVRYRFEY-LFKELTQEA 1079
                + F+   F  ++ EA
Sbjct: 263  KRCDWEFDEDAFSSVSPEA 281

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 98.6 bits (246), Expect = 6e-22
 Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 8/155 (5%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APE++  EP+   TD+W+ GVL YVLLSG SPF G+ + ET QNV    + F+   F  +
Sbjct: 218  APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 277

Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDEY 1260
            + EA  F+  +L   + P KR TV +  E+ WL      +  R  +       ++  ++Y
Sbjct: 278  SPEAKDFIKNLLQ--KEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKY 335

Query: 1261 HDLKNKQFTSD---SLSSLHKTLTRSNSIQEELIS 1292
             D    Q       + SSL K   +   I +    
Sbjct: 336  ADWPAPQPAIGRIANFSSLRKHRPQEYQIYDSYFD 370

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 85.5 bits (212), Expect = 1e-17
 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 464 GGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           GGEL   +  + Y  +E ++ +Y+RQ   GL +MH  SI HL + P +++        + 
Sbjct: 132 GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVK 191

Query: 523 LTDFGLSRRI 532
           + DFGL+ ++
Sbjct: 192 IIDFGLATKL 201

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 75.5 bits (186), Expect = 2e-14
 Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 17/162 (10%)

Query: 556 MKHLQAITEAGHTPTLAQDPPPLN----------YSVEDSPIEWSTEPPTDKYQFISEIH 605
           M+        G       D P +N                P+E       D Y  + E+ 
Sbjct: 1   MRGSHHHHHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELG 60

Query: 606 RGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQ-VNTEFDNLRSLRHERIASLLEAYKP 664
            G F VV +  EKA T  +  AK     +      V  E   +  L H ++ +L +A++ 
Sbjct: 61  SGAFGVVHRCVEKA-TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE- 118

Query: 665 STTASNIAVLVMEKLQGADVLSYLSSR-HEYTEQNVATIISQ 705
                 + VL++E L G ++   +++  ++ +E  V   + Q
Sbjct: 119 --DKYEM-VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ 157

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 66.3 bits (162), Expect = 2e-11
 Identities = 16/63 (25%), Positives = 31/63 (49%)

Query: 32 EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          + ++           + V+ +   + D YD  +ELG G  G+V+  VE+++GR + AK +
Sbjct: 25 DYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI 84

Query: 92 TGK 94
             
Sbjct: 85 NTP 87

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  187 bits (476), Expect = 4e-52
 Identities = 55/164 (33%), Positives = 93/164 (56%), Gaps = 3/164 (1%)

Query: 172 RQVKTRTKPITDAYDFG--DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
           R V  +   +   Y     + LG G  G V+   E ++G   AAK++  +G + K   KN
Sbjct: 76  RIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKN 135

Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQ 288
           E+ +MNQL H NL++L+D++E+K+   ++ E   GGEL   +  +SY  TE D   +++Q
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ 195

Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           +  G+ +MH++ I HL L P ++L  +   + + + DFGL+RR 
Sbjct: 196 ICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY 239

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  117 bits (296), Expect = 2e-28
 Identities = 45/139 (32%), Positives = 79/139 (56%), Gaps = 17/139 (12%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-------TKL 1001
               +  + +G++++H   + HL+++P+N++  +  + Q+K+ID G  +R           
Sbjct: 190  ILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF 249

Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            GT         PEF APEV+  + +   TD+WS GV+AY+LLSG SPF G ++ ET  N+
Sbjct: 250  GT---------PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNI 300

Query: 1062 NFVRYRFEY-LFKELTQEA 1079
               R+  E   F+++++EA
Sbjct: 301  LACRWDLEDEEFQDISEEA 319

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 96.3 bits (240), Expect = 3e-21
 Identities = 41/118 (34%), Positives = 66/118 (55%), Gaps = 7/118 (5%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEV+  + +   TD+WS GV+AY+LLSG SPF G ++ ET  N+   R+  E   F+++
Sbjct: 256  APEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDI 315

Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
            ++EA  F+  +LI +     R +  E  ++ WL  S++ +  R  A    NR  +  D
Sbjct: 316  SEEAKEFISKLLIKE--KSWRISASEALKHPWL--SDHKLHSRLSAQKKKNRGSDAQD 369

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 84.0 bits (208), Expect = 3e-17
 Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)

Query: 464 GGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           GGEL   +  +SY  TE D   +++Q+  G+ +MH++ I HL L P ++L  +   + + 
Sbjct: 170 GGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIK 229

Query: 523 LTDFGLSRRI 532
           + DFGL+RR 
Sbjct: 230 IIDFGLARRY 239

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 64.3 bits (157), Expect = 8e-11
 Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 9/142 (6%)

Query: 568 TPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFIS--EIHRGKFSVVVKAAEKANTENLV 625
           T  LA D P      +   +          Y       +  G+F  V K  E A T   +
Sbjct: 59  TSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETA-TGLKL 117

Query: 626 AAKLFEYSH-DTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADV 684
           AAK+ +        +V  E   +  L H  +  L +A++   + ++I VLVME + G ++
Sbjct: 118 AAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE---SKNDI-VLVMEYVDGGEL 173

Query: 685 LSYLSSR-HEYTEQNVATIISQ 705
              +    +  TE +    + Q
Sbjct: 174 FDRIIDESYNLTELDTILFMKQ 195

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 57.8 bits (140), Expect = 1e-08
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 47  RQVKTRTKPITDAYDFG--DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGT 96
           R V  +   +   Y     + LG G  G V+   E ++G   AAK++  +G 
Sbjct: 76  RIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM 127

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  183 bits (468), Expect = 1e-51
 Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 2/155 (1%)

Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC 238
           K + + Y   ++LGRG  GIV+  VE SS + Y AK +  KG   + L K E+ I+N   
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIAR 59

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHS-LTRQSYYTEYDIAHYIRQLLSGLDYMH 297
           HRN++ LH+S+E+ +   +I E   G ++     T      E +I  Y+ Q+   L ++H
Sbjct: 60  HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119

Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
             +I H  + P +++        + + +FG +R++
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  118 bits (299), Expect = 3e-29
 Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 17/139 (12%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-------TKL 1001
               V  V + LQ+LH   + H +I P+N++  + RS  +K+I+ G  +++          
Sbjct: 105  VSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF 164

Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
                       PE+ APEV   + +   TD+WS G L YVLLSG +PF  ++  +  +N+
Sbjct: 165  TA---------PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI 215

Query: 1062 NFVRYRFEY-LFKELTQEA 1079
                Y F+   FKE++ EA
Sbjct: 216  MNAEYTFDEEAFKEISIEA 234

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 93.1 bits (232), Expect = 2e-20
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 9/118 (7%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEV   + +   TD+WS G L YVLLSG +PF  ++  +  +N+    Y F+   FKE+
Sbjct: 171  APEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEI 230

Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLV----PSEYMIKKRERAVFLGNRLK 1254
            + EA  F+  +L+  +    R T  E  ++ WL          + +  +     + L 
Sbjct: 231  SIEAMDFVDRLLV--KERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRRYYHTLI 286

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 83.4 bits (207), Expect = 3e-17
 Identities = 14/70 (20%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 464 GGELLHS-LTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           G ++     T      E +I  Y+ Q+   L ++H  +I H  + P +++        + 
Sbjct: 85  GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIK 144

Query: 523 LTDFGLSRRI 532
           + +FG +R++
Sbjct: 145 IIEFGQARQL 154

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 68.0 bits (167), Expect = 3e-12
 Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 6/112 (5%)

Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHER 654
            +KY    ++ RG+F +V +  E + ++    AK  +        V  E   L   RH  
Sbjct: 4   YEKYMIAEDLGRGEFGIVHRCVETS-SKKTYMAKFVKVKGTDQVLVKKEISILNIARHRN 62

Query: 655 IASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR-HEYTEQNVATIISQ 705
           I  L E+++   +   + V++ E + G D+   +++   E  E+ + + + Q
Sbjct: 63  ILHLHESFE---SMEEL-VMIFEFISGLDIFERINTSAFELNEREIVSYVHQ 110

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 59.6 bits (145), Expect = 2e-09
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 54 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG 95
          K + + Y   ++LGRG  GIV+  VE SS + Y AK +  KG
Sbjct: 1  KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG 42

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  189 bits (481), Expect = 5e-51
 Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 19/251 (7%)

Query: 96  TISHSVTVHVEDNENEYSYRTYA---RGR----------QVKTRTKPITDAYDFGDELGR 142
           +     T+       +Y +R  A    G+           +    +     YD  DE G+
Sbjct: 62  SRYTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRRGYD-VDEQGK 120

Query: 143 GVTGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHA 202
            V G  + S        +    Y      + V+ +   + D YD  +ELG G  G+V+  
Sbjct: 121 IVRGKGTVSSNYDNYVFDIWKQYYP----QPVEIKHDHVLDHYDIHEELGTGAFGVVHRV 176

Query: 203 VERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA 262
            ER++G N+AAK +       K   + E+  M+ L H  LV LHD++E  +   +I E  
Sbjct: 177 TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236

Query: 263 GGGELLHSLT-RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 321
            GGEL   +    +  +E +   Y+RQ+  GL +MH  +  HL L P +++        L
Sbjct: 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL 296

Query: 322 LLTDFGLSRRI 332
            L DFGL+  +
Sbjct: 297 KLIDFGLTAHL 307

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  121 bits (306), Expect = 1e-28
 Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 5/141 (3%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
               +  V  GL ++H     HL+++P+N++  + RS ++KLID G T  +    ++    
Sbjct: 258  VEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT 317

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
             T   EFAAPEV   +P+   TD+WS GVL+Y+LLSG SPF G+++ ET +NV    +  
Sbjct: 318  GTA--EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM 375

Query: 1069 EY-LFKELTQEATRFL--MLI 1086
            +   F  ++++   F+  +L+
Sbjct: 376  DDSAFSGISEDGKDFIRKLLL 396

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 99.5 bits (248), Expect = 2e-21
 Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 11/173 (6%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEV   +P+   TD+WS GVL+Y+LLSG SPF G+++ ET +NV    +  +   F  +
Sbjct: 324  APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGI 383

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDEYHD 1262
            +++   F+  +    P  R T+ +  E+ WL P     +  +      +R  +  D    
Sbjct: 384  SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPS---SRYTKIRDSIKT 440

Query: 1263 LKNKQFTS-------DSLSSLHKTLTRSNSIQEELISTAFTSHLVNKPSSDSS 1308
              +             + SSL K   +  SI++     +            + 
Sbjct: 441  KYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTE 493

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 84.5 bits (209), Expect = 1e-16
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 464 GGELLHSLT-RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           GGEL   +    +  +E +   Y+RQ+  GL +MH  +  HL L P +++        L 
Sbjct: 238 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELK 297

Query: 523 LTDFGLSRRI 532
           L DFGL+  +
Sbjct: 298 LIDFGLTAHL 307

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 71.8 bits (176), Expect = 8e-13
 Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 7/144 (4%)

Query: 564 EAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTEN 623
           +   +         +       P+E   +   D Y    E+  G F VV +  E+A T N
Sbjct: 125 KGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERA-TGN 183

Query: 624 LVAAKLFEYSHDTLHQ-VNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGA 682
             AAK     H++  + V  E   +  LRH  + +L +A++     + + V++ E + G 
Sbjct: 184 NFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE---DDNEM-VMIYEFMSGG 239

Query: 683 DVLSYL-SSRHEYTEQNVATIISQ 705
           ++   +    ++ +E      + Q
Sbjct: 240 ELFEKVADEHNKMSEDEAVEYMRQ 263

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 64.9 bits (158), Expect = 1e-10
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 6/91 (6%)

Query: 21  STISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVER 80
             +    TV    +   +        + V+ +   + D YD  +ELG G  G+V+   ER
Sbjct: 120 KIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTER 179

Query: 81  SSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
           ++G N+AAK       +        E    E
Sbjct: 180 ATGNNFAAKF------VMTPHESDKETVRKE 204

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 51.8 bits (124), Expect = 1e-06
 Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 1/67 (1%)

Query: 1090 EVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLA 1149
               W   A +  + +  ++ L+    Y FR+ A+N  G S+   P+A         +   
Sbjct: 53   GGSWSPCAKS-RYTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRR 111

Query: 1150 EEPIFPQ 1156
               +  Q
Sbjct: 112  GYDVDEQ 118

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  181 bits (461), Expect = 1e-50
 Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 8/164 (4%)

Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM------TGKGNQYKSLFKNE 230
           + + + D YD G+ELG G   IV    E+S+G  YAAK +        +    +   + E
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65

Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ Q+ H N++ LHD YE +    +I EL  GGEL   L ++   +E +   +I+Q+L
Sbjct: 66  VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125

Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHP--GGRHLLLTDFGLSRRI 332
            G++Y+H   IAH  L P ++++        H+ L DFGL+  I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  115 bits (290), Expect = 4e-28
 Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 21/150 (14%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR--SVQVKLIDLGCTQRV-------T 999
               +  +LDG+ YLH + + H +++P+N+++         +KLID G    +        
Sbjct: 118  TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177

Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GT         PEF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  
Sbjct: 178  IFGT---------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228

Query: 1060 NVNFVRYRFEY-LFKELTQEATRFL--MLI 1086
            N+  V Y F+   F   ++ A  F+  +L+
Sbjct: 229  NITSVSYDFDEEFFSHTSELAKDFIRKLLV 258

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 97.7 bits (244), Expect = 5e-22
 Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 6/118 (5%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  N+  V Y F+   F   
Sbjct: 186  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245

Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLG-NRLKEFS 1257
            ++ A  F+  +L+  +   KR T++E   + W+ P +       R   +     ++  
Sbjct: 246  SELAKDFIRKLLV--KETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQY 301

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 83.5 bits (207), Expect = 3e-17
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP--GGRHL 521
           GGEL   L ++   +E +   +I+Q+L G++Y+H   IAH  L P ++++        H+
Sbjct: 99  GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158

Query: 522 LLTDFGLSRRI 532
            L DFGL+  I
Sbjct: 159 KLIDFGLAHEI 169

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 66.5 bits (163), Expect = 1e-11
 Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 12/123 (9%)

Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF-------EYSHDTLHQVNT 642
             +   D Y    E+  G+F++V K  EK+ T    AAK              +  ++  
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVSREEIER 64

Query: 643 EFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATI 702
           E   LR + H  + +L + Y+     +++ VL++E + G ++  +L+ +   +E+   + 
Sbjct: 65  EVSILRQVLHHNVITLHDVYE---NRTDV-VLILELVSGGELFDFLAQKESLSEEEATSF 120

Query: 703 ISQ 705
           I Q
Sbjct: 121 IKQ 123

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 65.7 bits (161), Expect = 2e-11
 Identities = 21/60 (35%), Positives = 32/60 (53%)

Query: 52  RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
           + + + D YD G+ELG G   IV    E+S+G  YAAK +  + + +    V  E+ E E
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  179 bits (456), Expect = 6e-50
 Identities = 52/164 (31%), Positives = 88/164 (53%), Gaps = 8/164 (4%)

Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM------TGKGNQYKSLFKNE 230
           R + + D YD G+ELG G   +V    E+S+G  YAAK +      + +    +   + E
Sbjct: 5   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64

Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 65  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124

Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHP--GGRHLLLTDFGLSRRI 332
           +G+ Y+H L IAH  L P ++++         + + DFGL+ +I
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  115 bits (291), Expect = 4e-28
 Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 21/150 (14%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS--VRSVQVKLIDLGCTQRV-------T 999
               +  +L+G+ YLH   + H +++P+N+++    V   ++K+ID G   ++        
Sbjct: 117  TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176

Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GT         PEF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  
Sbjct: 177  IFGT---------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227

Query: 1060 NVNFVRYRFEY-LFKELTQEATRFL--MLI 1086
            NV+ V Y FE   F   +  A  F+  +L+
Sbjct: 228  NVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 98.5 bits (246), Expect = 3e-22
 Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 6/117 (5%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y FE   F   
Sbjct: 185  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244

Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLG-NRLKEF 1256
            +  A  F+  +L+  + P KR T+++  ++ W+ P +       +A  +   + K+F
Sbjct: 245  SALAKDFIRRLLV--KDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKFKKF 299

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 82.3 bits (204), Expect = 8e-17
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP--GGRHL 521
           GGEL   L  +   TE +   +++Q+L+G+ Y+H L IAH  L P ++++         +
Sbjct: 98  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157

Query: 522 LLTDFGLSRRI 532
            + DFGL+ +I
Sbjct: 158 KIIDFGLAHKI 168

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 65.4 bits (160), Expect = 3e-11
 Identities = 24/60 (40%), Positives = 32/60 (53%)

Query: 52  RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
           R + + D YD G+ELG G   +V    E+S+G  YAAK +  + T S    V  ED E E
Sbjct: 5   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 65.0 bits (159), Expect = 4e-11
 Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 12/124 (9%)

Query: 589 WSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK-------LFEYSHDTLHQVN 641
           +  E   D Y    E+  G+F+VV K  EK+ T    AAK              +   + 
Sbjct: 4   FRQENVDDYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIE 62

Query: 642 TEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVAT 701
            E   L+ ++H  + +L E Y+     +++ +L++E + G ++  +L+ +   TE+    
Sbjct: 63  REVSILKEIQHPNVITLHEVYE---NKTDV-ILILELVAGGELFDFLAEKESLTEEEATE 118

Query: 702 IISQ 705
            + Q
Sbjct: 119 FLKQ 122

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  179 bits (457), Expect = 9e-50
 Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 8/164 (4%)

Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM------TGKGNQYKSLFKNE 230
           + + + D YD G+ELG G   IV    E+S+G  YAAK +        +    +   + E
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIERE 65

Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ Q+ H N++ LHD YE +    +I EL  GGEL   L ++   +E +   +I+Q+L
Sbjct: 66  VSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125

Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRRI 332
            G++Y+H   IAH  L P ++++        H+ L DFGL+  I
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  115 bits (291), Expect = 7e-28
 Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 21/150 (14%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS--VRSVQVKLIDLGCTQRV-------T 999
               +  +LDG+ YLH + + H +++P+N+++    +    +KLID G    +        
Sbjct: 118  TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177

Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GT         PEF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  
Sbjct: 178  IFGT---------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228

Query: 1060 NVNFVRYRFEY-LFKELTQEATRFL--MLI 1086
            N+  V Y F+   F + ++ A  F+  +L+
Sbjct: 229  NITAVSYDFDEEFFSQTSELAKDFIRKLLV 258

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 98.2 bits (245), Expect = 6e-22
 Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 23/182 (12%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  N+  V Y F+   F + 
Sbjct: 186  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245

Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLG-NRLKEFSDE 1259
            ++ A  F+  +L+  +   KR T++E   + W+ P +       R   +     K+    
Sbjct: 246  SELAKDFIRKLLV--KETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFKKQY-- 301

Query: 1260 YHDLKNK------------QFTSDSLSSLHKTLTRSNSIQEELISTAFTSHLVNKPSSDS 1307
               ++ +              T   +  +H   +      E              P   S
Sbjct: 302  ---VRRRWKLSFSIVSLCNHLTRSLMKKVHLRTSEDLRNCESDTEENIARRKALHPRRRS 358

Query: 1308 ST 1309
            ST
Sbjct: 359  ST 360

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 82.4 bits (204), Expect = 1e-16
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHL 521
           GGEL   L ++   +E +   +I+Q+L G++Y+H   IAH  L P ++++        H+
Sbjct: 99  GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158

Query: 522 LLTDFGLSRRI 532
            L DFGL+  I
Sbjct: 159 KLIDFGLAHEI 169

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 66.2 bits (162), Expect = 2e-11
 Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 12/124 (9%)

Query: 589 WSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF-------EYSHDTLHQVN 641
           +  +   D Y    E+  G+F++V K  EK+ T    AAK                 ++ 
Sbjct: 5   FKQQKVEDFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVCREEIE 63

Query: 642 TEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVAT 701
            E   LR + H  I +L + Y+     +++ VL++E + G ++  +L+ +   +E+   +
Sbjct: 64  REVSILRQVLHPNIITLHDVYE---NRTDV-VLILELVSGGELFDFLAQKESLSEEEATS 119

Query: 702 IISQ 705
            I Q
Sbjct: 120 FIKQ 123

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 65.5 bits (160), Expect = 4e-11
 Identities = 21/60 (35%), Positives = 32/60 (53%)

Query: 52  RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
           + + + D YD G+ELG G   IV    E+S+G  YAAK +  + + +    V  E+ E E
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIERE 65

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  174 bits (444), Expect = 8e-49
 Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 8/160 (5%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM------TGKGNQYKSLFKNELDIM 234
           + D Y+ G+ELG G   IV    ++ +G+ YAAK +      + +    +   + E++I+
Sbjct: 3   VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62

Query: 235 NQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
            ++ H N++ LHD +E K    +I EL  GGEL   L  +   TE +   +++Q+L G+ 
Sbjct: 63  REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 122

Query: 295 YMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI 332
           Y+H   IAH  L P ++++         + L DFG++ +I
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  114 bits (288), Expect = 4e-28
 Identities = 50/150 (33%), Positives = 85/150 (56%), Gaps = 21/150 (14%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS--VRSVQVKLIDLGCTQRV-------T 999
               +  +LDG+ YLH + + H +++P+N+++    V + ++KLID G   ++        
Sbjct: 111  TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN 170

Query: 1000 KLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              GT         PEF APE++  EP+  + D+WS GV+ Y+LLSGASPF G+++ ET  
Sbjct: 171  IFGT---------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT 221

Query: 1060 NVNFVRYRFEY-LFKELTQEATRFL--MLI 1086
            N++ V Y F+   F   ++ A  F+  +L+
Sbjct: 222  NISAVNYDFDEEYFSNTSELAKDFIRRLLV 251

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 94.2 bits (235), Expect = 4e-21
 Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 5/93 (5%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G+++ ET  N++ V Y F+   F   
Sbjct: 179  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 238

Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
            ++ A  F+  +L+  + P +R T+ +  E+ W+
Sbjct: 239  SELAKDFIRRLLV--KDPKRRMTIAQSLEHSWI 269

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 81.8 bits (203), Expect = 5e-17
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHL 521
           GGEL   L  +   TE +   +++Q+L G+ Y+H   IAH  L P ++++         +
Sbjct: 92  GGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRI 151

Query: 522 LLTDFGLSRRI 532
            L DFG++ +I
Sbjct: 152 KLIDFGIAHKI 162

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 62.2 bits (152), Expect = 2e-10
 Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 12/118 (10%)

Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK-------LFEYSHDTLHQVNTEFDNL 647
            D Y+   E+  G+F++V K  +K  T    AAK              +  ++  E + L
Sbjct: 4   EDHYEMGEELGSGQFAIVRKCRQKG-TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62

Query: 648 RSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
           R +RH  I +L + ++     +++ VL++E + G ++  +L+ +   TE      + Q
Sbjct: 63  REIRHPNIITLHDIFE---NKTDV-VLILELVSGGELFDFLAEKESLTEDEATQFLKQ 116

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 61.0 bits (149), Expect = 5e-10
 Identities = 19/56 (33%), Positives = 29/56 (51%)

Query: 56  ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
           + D Y+ G+ELG G   IV    ++ +G+ YAAK +  +   S    V  E+ E E
Sbjct: 3   VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIERE 58

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  158 bits (401), Expect = 7e-43
 Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 1/155 (0%)

Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQ 236
           +T  I   + F + LG G    V+   +R +G+ +A K +        S  +NE+ ++ +
Sbjct: 3   QTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKK 62

Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
           + H N+V L D YE+   + ++ +L  GGEL   +  +  YTE D +  I+Q+LS + Y+
Sbjct: 63  IKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYL 122

Query: 297 HRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSR 330
           H   I H  L P +LL   P     +++TDFGLS+
Sbjct: 123 HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 86.9 bits (216), Expect = 2e-18
 Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 17/133 (12%)

Query: 945  THKDA-YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRV---- 998
            T KDA   +  VL  ++YLH  G+ H +++P+N++  +     ++ + D G ++      
Sbjct: 104  TEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163

Query: 999  --TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
              T  GT         P + APEVLA++P     D WS GV+ Y+LL G  PF  ++E +
Sbjct: 164  MSTACGT---------PGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK 214

Query: 1057 TRQNVNFVRYRFE 1069
              + +    Y FE
Sbjct: 215  LFEKIKEGYYEFE 227

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 75.7 bits (187), Expect = 8e-15
 Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 5/116 (4%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF--EYLFKE 1201
            APEVLA++P     D WS GV+ Y+LL G  PF  ++E +  + +    Y F   + + +
Sbjct: 175  APEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPF-WDD 233

Query: 1202 LTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFS 1257
            +++ A  F+  + ++ P +R T E+   + W+  +  + +    +V    ++++  
Sbjct: 234  ISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVS--LQIQKNF 287

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 71.4 bits (176), Expect = 3e-13
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHL 521
            GGEL   +  +  YTE D +  I+Q+LS + Y+H   I H  L P +LL   P     +
Sbjct: 89  SGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKI 148

Query: 522 LLTDFGLSR 530
           ++TDFGLS+
Sbjct: 149 MITDFGLSK 157

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 55.3 bits (134), Expect = 5e-08
 Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 8/124 (6%)

Query: 591 TEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE-YSHDTLHQVNTEFDNLRS 649
           T      + F+  +  G FS V    ++  T  L A K  +         +  E   L+ 
Sbjct: 4   TTNIRKTFIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKK 62

Query: 650 LRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE- 708
           ++HE I +L + Y+   + ++   LVM+ + G ++   +  R  YTE++ + +I Q    
Sbjct: 63  IKHENIVTLEDIYE---STTHY-YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSA 118

Query: 709 -HYL 711
             YL
Sbjct: 119 VKYL 122

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 53.7 bits (130), Expect = 1e-07
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 6/60 (10%)

Query: 52  RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
           +T  I   + F + LG G    V+   +R +G+ +A K       I  S        ENE
Sbjct: 3   QTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKC------IKKSPAFRDSSLENE 56

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  154 bits (392), Expect = 6e-42
 Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 3/175 (1%)

Query: 168 YARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKS 225
           ++ GR+         + Y+    LG+G  G V    +R + + YA KV+      N+  S
Sbjct: 7   HSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS 66

Query: 226 LFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHY 285
               E++++ +L H N+++L +  E   SF I+ EL  GGEL   + ++  ++E+D A  
Sbjct: 67  TILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI 126

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRITSFGKLN 339
           I+Q+ SG+ YMH+ +I H  L P ++L+        + + DFGLS       K+ 
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 81.1 bits (201), Expect = 1e-16
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 18/129 (13%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRV-------TK 1000
            A  +  V  G+ Y+H   + H +++P+N+++ S      +K+ID G +           +
Sbjct: 124  ARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
            +GT           + APEVL       + DVWSAGV+ Y+LLSG  PF G++E +  + 
Sbjct: 184  IGT---------AYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR 233

Query: 1061 VNFVRYRFE 1069
            V   +Y F+
Sbjct: 234  VETGKYAFD 242

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 68.8 bits (169), Expect = 1e-12
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
           GGEL   + ++  ++E+D A  I+Q+ SG+ YMH+ +I H  L P ++L+        + 
Sbjct: 105 GGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK 164

Query: 523 LTDFGLSRRITSFGKLN 539
           + DFGLS       K+ 
Sbjct: 165 IIDFGLSTCFQQNTKMK 181

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 64.6 bits (158), Expect = 4e-11
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 2/91 (2%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEVL       + DVWSAGV+ Y+LLSG  PF G++E +  + V   +Y F+   ++ +
Sbjct: 191  APEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + +A   +  +    P  R T  +C E+ W+
Sbjct: 250  SDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 60.7 bits (148), Expect = 6e-10
 Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 8/119 (6%)

Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE---YSHDTLHQVNTEFDN 646
                 ++Y  +  + +G F  V+K  ++  T+   A K+       +     +  E + 
Sbjct: 16  FQGTFAERYNIVCMLGKGSFGEVLKCKDRI-TQQEYAVKVINKASAKNKDTSTILREVEL 74

Query: 647 LRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
           L+ L H  I  L E  +    +S+   +V E   G ++   +  R  ++E + A II Q
Sbjct: 75  LKKLDHPNIMKLFEILE---DSSSFY-IVGELYTGGELFDEIIKRKRFSEHDAARIIKQ 129

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 54.5 bits (132), Expect = 7e-08
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 43 YARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
          ++ GR+         + Y+    LG+G  G V    +R + + YA KV
Sbjct: 7  HSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKV 54

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  154 bits (391), Expect = 9e-42
 Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 9/161 (5%)

Query: 178 TKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYKSLFKNELD 232
           +   +D YD  +ELG+G   +V   V +++G  +AAK+     ++ +  Q     + E  
Sbjct: 1   STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREAR 57

Query: 233 IMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSG 292
           I  +L H N+VRLHDS + +    ++ +L  GGEL   +  + +Y+E D +H I+Q+L  
Sbjct: 58  ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 117

Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI 332
           + Y H   I H  L P +LL+A    G  + L DFGL+  +
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 89.2 bits (222), Expect = 2e-19
 Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 17/129 (13%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRV-------TK 1000
            ++C+  +L+ + Y H  G+ H N++P+N+++AS  +   VKL D G    V         
Sbjct: 108  SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 167

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
             GT         P + +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +      
Sbjct: 168  AGT---------PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ 218

Query: 1061 VNFVRYRFE 1069
            +    Y + 
Sbjct: 219  IKAGAYDYP 227

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 71.4 bits (176), Expect = 2e-13
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 7/94 (7%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF--EYLFKE 1201
            +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +      +    Y +     +  
Sbjct: 175  SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPE-WDT 233

Query: 1202 LTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
            +T EA   +  ML     P KR T ++  +  W+
Sbjct: 234  VTPEAKSLIDSMLT--VNPKKRITADQALKVPWI 265

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 70.3 bits (173), Expect = 4e-13
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
           GGEL   +  + +Y+E D +H I+Q+L  + Y H   I H  L P +LL+A    G  + 
Sbjct: 89  GGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK 148

Query: 523 LTDFGLSRRI 532
           L DFGL+  +
Sbjct: 149 LADFGLAIEV 158

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 58.7 bits (143), Expect = 3e-09
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 591 TEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE---YSHDTLHQVNTEFDNL 647
           +   +D Y    E+ +G FSVV +   K  T    AAK+      S     ++  E    
Sbjct: 1   STKFSDNYDVKEELGKGAFSVVRRCVHKT-TGLEFAAKIINTKKLSARDFQKLEREARIC 59

Query: 648 RSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
           R L+H  I  L ++ +     S    LV + + G ++   + +R  Y+E + +  I Q
Sbjct: 60  RKLQHPNIVRLHDSIQ---EESFH-YLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 113

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 53.7 bits (130), Expect = 1e-07
 Identities = 13/39 (33%), Positives = 24/39 (61%)

Query: 53 TKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          +   +D YD  +ELG+G   +V   V +++G  +AAK++
Sbjct: 1  STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII 39

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  154 bits (391), Expect = 2e-41
 Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 7/171 (4%)

Query: 169 ARGRQVKTRTKPITDAYDF-GDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKS 225
                     +   + Y     ELGRG   +V   + +S+G+ YAAK +    +G   ++
Sbjct: 14  GTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRA 73

Query: 226 LFKNELDIMNQLCHR-NLVRLHDSYETKDSFTIISELAGGGELLHSLT--RQSYYTEYDI 282
              +E+ ++        ++ LH+ YE      +I E A GGE+            +E D+
Sbjct: 74  EILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDV 133

Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
              I+Q+L G+ Y+H+ +I HL L P ++L++       + + DFG+SR+I
Sbjct: 134 IRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  114 bits (288), Expect = 1e-27
 Identities = 45/149 (30%), Positives = 84/149 (56%), Gaps = 20/149 (13%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRV-------TK 1000
               +  +L+G+ YLH   + HL+++P N++++S+     +K++D G ++++         
Sbjct: 134  IRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI 193

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
            +GT         PE+ APE+L  +PI   TD+W+ G++AY+LL+  SPF G+   ET  N
Sbjct: 194  MGT---------PEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN 244

Query: 1061 VNFVRYRFEY-LFKELTQEATRFL--MLI 1086
            ++ V   +    F  ++Q AT F+  +L+
Sbjct: 245  ISQVNVDYSEETFSSVSQLATDFIQSLLV 273

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 97.3 bits (243), Expect = 6e-22
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 5/117 (4%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APE+L  +PI   TD+W+ G++AY+LL+  SPF G+   ET  N++ V   +    F  +
Sbjct: 201  APEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSV 260

Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFS 1257
            +Q AT F+  +L+  + P KRPT E C  + WL   ++            ++ ++ S
Sbjct: 261  SQLATDFIQSLLV--KNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDHS 315

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 72.3 bits (178), Expect = 2e-13
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 3/72 (4%)

Query: 464 GGELLHSLT--RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
           GGE+            +E D+   I+Q+L G+ Y+H+ +I HL L P ++L++       
Sbjct: 113 GGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGD 172

Query: 522 L-LTDFGLSRRI 532
           + + DFG+SR+I
Sbjct: 173 IKIVDFGMSRKI 184

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 55.3 bits (134), Expect = 5e-08
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 12/123 (9%)

Query: 590 STEPPTDKYQFIS-EIHRGKFSVVVKAAEKANTENLVAAKLFE---YSHDTLHQVNTEFD 645
           S E   + Y   S E+ RGKF+VV +   K+ T    AAK  +      D   ++  E  
Sbjct: 22  SMENFNNFYILTSKELGRGKFAVVRQCISKS-TGQEYAAKFLKKRRRGQDCRAEILHEIA 80

Query: 646 NLRSLRH-ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE--YTEQNVATI 702
            L   +   R+ +L E Y+     S I +L++E   G ++ S          +E +V  +
Sbjct: 81  VLELAKSCPRVINLHEVYE---NTSEI-ILILEYAAGGEIFSLCLPELAEMVSENDVIRL 136

Query: 703 ISQ 705
           I Q
Sbjct: 137 IKQ 139

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 50.7 bits (122), Expect = 1e-06
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 44 ARGRQVKTRTKPITDAYDF-GDELGRGVTGIVYHAVERSSGRNYAAKVM 91
                    +   + Y     ELGRG   +V   + +S+G+ YAAK +
Sbjct: 14 GTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFL 62

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  154 bits (392), Expect = 5e-41
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)

Query: 170 RGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYK 224
               +   +   +D YD  +ELG+G   +V   V +++G  +AAK+     ++ +  Q  
Sbjct: 16  GSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ-- 73

Query: 225 SLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH 284
              + E  I  +L H N+VRLHDS + +    ++ +L  GGEL   +  + +Y+E D +H
Sbjct: 74  -KLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 132

Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI 332
            I+Q+L  + Y H   I H  L P +LL+A    G  + L DFGL+  +
Sbjct: 133 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 90.8 bits (226), Expect = 2e-19
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 17/129 (13%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRV-------TK 1000
            ++C+  +L+ + Y H  G+ H N++P+N+++AS      VKL D G    V         
Sbjct: 131  SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 190

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
             GT         P + +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +      
Sbjct: 191  AGT---------PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ 241

Query: 1061 VNFVRYRFE 1069
            +    Y + 
Sbjct: 242  IKAGAYDYP 250

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 79.3 bits (196), Expect = 1e-15
 Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 14/170 (8%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF--EYLFKE 1201
            +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +      +    Y +     +  
Sbjct: 198  SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPE-WDT 256

Query: 1202 LTQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDE 1259
            +T EA   +  ML     P KR T ++  +  W+   E +     R   + + LK+F+  
Sbjct: 257  VTPEAKSLIDSMLT--VNPKKRITADQALKVPWICNRERVASAIHRQDTV-DCLKKFNA- 312

Query: 1260 YHDLKNKQFTSDSLSSLHKTLTRSNSIQEELISTAFTSHLVNKPSSDSST 1309
                + K      L+++  T   SN  +  L           K SS+SS 
Sbjct: 313  ----RRK-LKGAILTTMIATRNLSNLGRNLLNKKEQGPPSTIKESSESSQ 357

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 70.4 bits (173), Expect = 9e-13
 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
           GGEL   +  + +Y+E D +H I+Q+L  + Y H   I H  L P +LL+A    G  + 
Sbjct: 112 GGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK 171

Query: 523 LTDFGLSRRI 532
           L DFGL+  +
Sbjct: 172 LADFGLAIEV 181

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 57.3 bits (139), Expect = 2e-08
 Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 8/114 (7%)

Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE---YSHDTLHQVNTEFDNLRSLR 651
           +D Y    E+ +G FSVV +   K  T    AAK+      S     ++  E    R L+
Sbjct: 28  SDNYDVKEELGKGAFSVVRRCVHKT-TGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 86

Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
           H  I  L ++ +     S    LV + + G ++   + +R  Y+E + +  I Q
Sbjct: 87  HPNIVRLHDSIQ---EESFH-YLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 136

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 54.2 bits (131), Expect = 1e-07
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 45 RGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
              +   +   +D YD  +ELG+G   +V   V +++G  +AAK+
Sbjct: 16 GSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI 61

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  154 bits (390), Expect = 6e-41
 Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 3/159 (1%)

Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIM 234
            +    ++D ++   ELGRG T IVY   ++ + + YA KV+    +  K + + E+ ++
Sbjct: 45  GSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD--KKIVRTEIGVL 102

Query: 235 NQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
            +L H N+++L + +ET    +++ EL  GGEL   +  + YY+E D A  ++Q+L  + 
Sbjct: 103 LRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVA 162

Query: 295 YMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI 332
           Y+H   I H  L P +LL A P     L + DFGLS+ +
Sbjct: 163 YLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 83.9 bits (208), Expect = 3e-17
 Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 19/135 (14%)

Query: 945  THKDA-YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRV---- 998
            + +DA   V  +L+ + YLH  G+ H +++P+N++ A+      +K+ D G ++ V    
Sbjct: 146  SERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205

Query: 999  ---TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ-SE 1054
               T  GT         P + APE+L      P+ D+WS G++ Y+LL G  PF  +  +
Sbjct: 206  LMKTVCGT---------PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD 256

Query: 1055 PETRQNVNFVRYRFE 1069
                + +    Y F 
Sbjct: 257  QFMFRRILNCEYYFI 271

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 70.1 bits (172), Expect = 1e-12
 Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 11/119 (9%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ-SEPETRQNVNFVRYRF--EYLFK 1200
            APE+L      P+ D+WS G++ Y+LL G  PF  +  +    + +    Y F   + + 
Sbjct: 218  APEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPW-WD 276

Query: 1201 ELTQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFS 1257
            E++  A   +  +++    P KR T  +  ++ W+          + A     +L+EF+
Sbjct: 277  EVSLNAKDLVRKLIVLD--PKKRLTTFQALQHPWVTGKAANFVHMDTAQ---KKLQEFN 330

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 70.1 bits (172), Expect = 1e-12
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
           GGEL   +  + YY+E D A  ++Q+L  + Y+H   I H  L P +LL A P     L 
Sbjct: 132 GGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLK 191

Query: 523 LTDFGLSRRI 532
           + DFGLS+ +
Sbjct: 192 IADFGLSKIV 201

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 58.5 bits (142), Expect = 6e-09
 Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 6/142 (4%)

Query: 564 EAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTEN 623
           ++  + T +  P   +   +      + +  +D ++  SE+ RG  S+V +  +K  T+ 
Sbjct: 21  QSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKG-TQK 79

Query: 624 LVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGAD 683
             A K+ + + D    V TE   L  L H  I  L E ++   T + I  LV+E + G +
Sbjct: 80  PYALKVLKKTVDK-KIVRTEIGVLLRLSHPNIIKLKEIFE---TPTEI-SLVLELVTGGE 134

Query: 684 VLSYLSSRHEYTEQNVATIISQ 705
           +   +  +  Y+E++ A  + Q
Sbjct: 135 LFDRIVEKGYYSERDAADAVKQ 156

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 50.8 bits (122), Expect = 1e-06
 Identities = 14/42 (33%), Positives = 24/42 (57%)

Query: 50 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
           +    ++D ++   ELGRG T IVY   ++ + + YA KV+
Sbjct: 45 GSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVL 86

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  153 bits (388), Expect = 1e-40
 Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 10/176 (5%)

Query: 173 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYKSLF 227
            +        D Y+  + +G+G   +V   + R +G+ +A K+      T          
Sbjct: 14  DMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDL 73

Query: 228 KNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ----SYYTEYDIA 283
           K E  I + L H ++V L ++Y +     ++ E   G +L   + ++      Y+E   +
Sbjct: 74  KREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS 133

Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKL 338
           HY+RQ+L  L Y H  +I H  + P  +L+A       + L  FG++ ++   G +
Sbjct: 134 HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV 189

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 87.7 bits (218), Expect = 2e-18
 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 5/123 (4%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLGTLIHP 1007
            ++ +  +L+ L+Y H   + H +++P  V++AS   S  VKL   G   ++ + G +   
Sbjct: 133  SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 192

Query: 1008 I-NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
               TP   F APEV+  EP     DVW  GV+ ++LLSG  PF G  E    + +   +Y
Sbjct: 193  RVGTP--HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKY 249

Query: 1067 RFE 1069
            +  
Sbjct: 250  KMN 252

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 73.9 bits (182), Expect = 6e-14
 Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 7/117 (5%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEV+  EP     DVW  GV+ ++LLSG  PF G  E    + +   +Y+     +  +
Sbjct: 201  APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHI 259

Query: 1203 TQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFS 1257
            ++ A   +  ML+    P +R TV E   + WL   +    K      +  +L++F+
Sbjct: 260  SESAKDLVRRMLM--LDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFN 313

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 65.4 bits (160), Expect = 3e-11
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 5/80 (6%)

Query: 464 GGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
           G +L   + ++      Y+E   +HY+RQ+L  L Y H  +I H  + P  +L+A     
Sbjct: 110 GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENS 169

Query: 520 HLL-LTDFGLSRRITSFGKL 538
             + L  FG++ ++   G +
Sbjct: 170 APVKLGGFGVAIQLGESGLV 189

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 58.1 bits (141), Expect = 9e-09
 Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 48  QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVED 107
            +        D Y+  + +G+G   +V   + R +G+ +A K++      + S  +  ED
Sbjct: 14  DMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVD-VAKFTSSPGLSTED 72

Query: 108 NENE 111
            + E
Sbjct: 73  LKRE 76

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 57.7 bits (140), Expect = 9e-09
 Identities = 31/144 (21%), Positives = 50/144 (34%), Gaps = 22/144 (15%)

Query: 572 AQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK--- 628
                 L+ + +D   E       D Y+    I +G FSVV +   +  T    A K   
Sbjct: 7   GGGGGILDMADDDVLFE-------DVYELCEVIGKGPFSVVRRCINRE-TGQQFAVKIVD 58

Query: 629 ---LFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVL 685
                     +   +  E      L+H  I  LLE Y    +   +  +V E + GAD+ 
Sbjct: 59  VAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYS---SDGML-YMVFEFMDGADLC 114

Query: 686 SYLSSR----HEYTEQNVATIISQ 705
             +  R      Y+E   +  + Q
Sbjct: 115 FEIVKRADAGFVYSEAVASHYMRQ 138

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  154 bits (391), Expect = 3e-40
 Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 3/166 (1%)

Query: 176 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKSLFKNELDI 233
                 T+ Y   +ELG+G   +V   V+  +G+ YAA ++  K    +     + E  I
Sbjct: 4   ITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARI 63

Query: 234 MNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
              L H N+VRLHDS   +    +I +L  GGEL   +  + YY+E D +H I+Q+L  +
Sbjct: 64  CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV 123

Query: 294 DYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRITSFGKL 338
            + H++ + H  L P +LL+A    G  + L DFGL+  +    + 
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA 169

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 89.7 bits (223), Expect = 1e-18
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 19/135 (14%)

Query: 945  THKDA-YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRV---- 998
            +  DA +C+  +L+ + + H  G+ H N++P+N+++AS      VKL D G    V    
Sbjct: 108  SEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167

Query: 999  ----TKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
                   GT         P + +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +
Sbjct: 168  QAWFGFAGT---------PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ 218

Query: 1055 PETRQNVNFVRYRFE 1069
                Q +    Y F 
Sbjct: 219  HRLYQQIKAGAYDFP 233

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 77.0 bits (190), Expect = 1e-14
 Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 8/118 (6%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF--EYLFKE 1201
            +PEVL ++P     D+W+ GV+ Y+LL G  PF  + +    Q +    Y F     +  
Sbjct: 181  SPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPE-WDT 239

Query: 1202 LTQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFS 1257
            +T EA   +  ML     P KR T  E  ++ W+     +     R   + + LK+F+
Sbjct: 240  VTPEAKDLINKMLT--INPSKRITAAEALKHPWISHRSTVASCMHRQETV-DCLKKFN 294

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 70.0 bits (172), Expect = 2e-12
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLL 522
           GGEL   +  + YY+E D +H I+Q+L  + + H++ + H  L P +LL+A    G  + 
Sbjct: 94  GGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVK 153

Query: 523 LTDFGLSRRITSFGKL 538
           L DFGL+  +    + 
Sbjct: 154 LADFGLAIEVEGEQQA 169

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 56.5 bits (137), Expect = 4e-08
 Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 8/114 (7%)

Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE---YSHDTLHQVNTEFDNLRSLR 651
           T++YQ   E+ +G FSVV +  +        AA +      S     ++  E    R L+
Sbjct: 10  TEEYQLFEELGKGAFSVVRRCVKVL-AGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68

Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
           H  I  L ++        +   L+ + + G ++   + +R  Y+E + +  I Q
Sbjct: 69  HPNIVRLHDSIS---EEGHHY-LIFDLVTGGELFEDIVAREYYSEADASHCIQQ 118

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 54.6 bits (132), Expect = 1e-07
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 51 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
                T+ Y   +ELG+G   +V   V+  +G+ YAA +
Sbjct: 4  ITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMI 43

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  149 bits (378), Expect = 3e-40
 Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 1/158 (0%)

Query: 176 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMN 235
           +    I   Y   + +GRG  G V  AV++ +    AAK +     +    FK E++IM 
Sbjct: 2   STKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMK 61

Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
            L H N++RL++++E      ++ EL  GGEL   +  +  + E D A  ++ +LS + Y
Sbjct: 62  SLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 121

Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRI 332
            H+L++AH  L P + L         L L DFGL+ R 
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 83.8 bits (208), Expect = 1e-17
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 18/129 (13%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRV-------TK 1000
            A  +  VL  + Y H   + H +++P+N +  +      +KLID G   R        TK
Sbjct: 109  ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK 168

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
            +GT         P + +P+VL E    P+ D WSAGV+ YVLL G  PF   ++ E    
Sbjct: 169  VGT---------PYYVSPQVL-EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLK 218

Query: 1061 VNFVRYRFE 1069
            +    + F 
Sbjct: 219  IREGTFTFP 227

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 69.2 bits (170), Expect = 1e-12
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 2/91 (2%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            +P+VL E    P+ D WSAGV+ YVLL G  PF   ++ E    +    + F    +  +
Sbjct: 176  SPQVL-EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNV 234

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + +A   +  +  ++P +R T  +  E+ W 
Sbjct: 235  SPQAESLIRRLLTKSPKQRITSLQALEHEWF 265

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 68.0 bits (167), Expect = 2e-12
 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL- 522
           GGEL   +  +  + E D A  ++ +LS + Y H+L++AH  L P + L         L 
Sbjct: 90  GGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLK 149

Query: 523 LTDFGLSRRI 532
           L DFGL+ R 
Sbjct: 150 LIDFGLAARF 159

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 59.1 bits (144), Expect = 2e-09
 Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 6/117 (5%)

Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH-DTLHQVNTEFDNLR 648
           +       Y   + I RG +  V  A +K  T    AAK       + + +   E + ++
Sbjct: 3   TKGDINQYYTLENTIGRGSWGEVKIAVQK-GTRIRRAAKKIPKYFVEDVDRFKQEIEIMK 61

Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
           SL H  I  L E ++     ++I  LVME   G ++   +  +  + E + A I+  
Sbjct: 62  SLDHPNIIRLYETFE---DNTDI-YLVMELCTGGELFERVVHKRVFRESDAARIMKD 114

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 50.7 bits (122), Expect = 1e-06
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 6/61 (9%)

Query: 51  TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNEN 110
           +    I   Y   + +GRG  G V  AV++ +    AAK       I       V+  + 
Sbjct: 2   STKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKK------IPKYFVEDVDRFKQ 55

Query: 111 E 111
           E
Sbjct: 56  E 56

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  154 bits (391), Expect = 7e-40
 Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 3/165 (1%)

Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFK 228
           GR+         + Y+    LG+G  G V    +R + + YA KV+      N+  S   
Sbjct: 10  GRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL 69

Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
            E++++ +L H N+++L +  E   SF I+ EL  GGEL   + ++  ++E+D A  I+Q
Sbjct: 70  REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ 129

Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLLLTDFGLSRRI 332
           + SG+ YMH+ +I H  L P ++L+        + + DFGLS   
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 87.8 bits (218), Expect = 5e-18
 Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 5/133 (3%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  V  G+ Y+H   + H +++P+N+++ S      +K+ID G +    +   +   
Sbjct: 124  ARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            I T    + APEVL       + DVWSAGV+ Y+LLSG  PF G++E +  + V   +Y 
Sbjct: 184  IGTAY--YIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA 240

Query: 1068 FEYL-FKELTQEA 1079
            F+   ++ ++ +A
Sbjct: 241  FDLPQWRTISDDA 253

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 78.2 bits (193), Expect = 7e-15
 Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL-FKEL 1202
            APEVL       + DVWSAGV+ Y+LLSG  PF G++E +  + V   +Y F+   ++ +
Sbjct: 191  APEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLG---NRLKEFS 1257
            + +A   +  +    P  R T  +C E+ W+               L      +++F 
Sbjct: 250  SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQ 307

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 68.9 bits (169), Expect = 5e-12
 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLL 522
           GGEL   + ++  ++E+D A  I+Q+ SG+ YMH+ +I H  L P ++L+        + 
Sbjct: 105 GGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK 164

Query: 523 LTDFGLSRRI 532
           + DFGLS   
Sbjct: 165 IIDFGLSTCF 174

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 63.9 bits (156), Expect = 2e-10
 Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 8/119 (6%)

Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK---LFEYSHDTLHQVNTEFDN 646
                 ++Y  +  + +G F  V+K  ++  T+   A K        +     +  E + 
Sbjct: 16  FQGTFAERYNIVCMLGKGSFGEVLKCKDRI-TQQEYAVKVINKASAKNKDTSTILREVEL 74

Query: 647 LRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
           L+ L H  I  L E  +    +S+   +V E   G ++   +  R  ++E + A II Q
Sbjct: 75  LKKLDHPNIMKLFEILE---DSSSFY-IVGELYTGGELFDEIIKRKRFSEHDAARIIKQ 129

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 54.7 bits (132), Expect = 1e-07
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 46 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
          GR+         + Y+    LG+G  G V    +R + + YA KV
Sbjct: 10 GRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKV 54

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  148 bits (376), Expect = 8e-40
 Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 6/170 (3%)

Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKN 229
           GR+       I D + F  +LG G  G V+   ERSSG     K +   +        + 
Sbjct: 10  GRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA 69

Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLH----SLTRQSYYTEYDIAHY 285
           E++++  L H N++++ + +E   +  I+ E   GGELL     +  R    +E  +A  
Sbjct: 70  EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITS 334
           ++Q+++ L Y H   + H  L P ++L         + + DFGL+    S
Sbjct: 130 MKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 93.8 bits (234), Expect = 6e-21
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 18/139 (12%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRV-------TK 1000
            A  +  +++ L Y H + + H +++P+N++         +K+ID G  +           
Sbjct: 127  AELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA 186

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
             GT           + APEV  +  +  + D+WSAGV+ Y LL+G  PF G S  E +Q 
Sbjct: 187  AGT---------ALYMAPEVF-KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK 236

Query: 1061 VNFVRYRFEYLFKELTQEA 1079
              +    +    + LT +A
Sbjct: 237  ATYKEPNYAVECRPLTPQA 255

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 78.0 bits (193), Expect = 1e-15
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APEV  +  +  + D+WSAGV+ Y LL+G  PF G S  E +Q   +    +    + LT
Sbjct: 194  APEVF-KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLT 252

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
             +A   L  +  + P +RP+  +   + W 
Sbjct: 253  PQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 62.3 bits (152), Expect = 2e-10
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 464 GGELLH----SLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
           GGELL     +  R    +E  +A  ++Q+++ L Y H   + H  L P ++L       
Sbjct: 104 GGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPH 163

Query: 520 HLL-LTDFGLSRRITS 534
             + + DFGL+    S
Sbjct: 164 SPIKIIDFGLAELFKS 179

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 55.7 bits (135), Expect = 3e-08
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 11/122 (9%)

Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE--YSHDTLHQVNTEFDNL 647
                 D + F  ++  G F  V    E++ +      K      S   + Q+  E + L
Sbjct: 16  FQGTIDDLFIFKRKLGSGAFGDVHLVEERS-SGLERVIKTINKDRSQVPMEQIEAEIEVL 74

Query: 648 RSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGAD----VLSYLSSRHEYTEQNVATII 703
           +SL H  I  + E ++      N+  +VME  +G +    ++S  +     +E  VA ++
Sbjct: 75  KSLDHPNIIKIFEVFE---DYHNM-YIVMETCEGGELLERIVSAQARGKALSEGYVAELM 130

Query: 704 SQ 705
            Q
Sbjct: 131 KQ 132

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 54.5 bits (132), Expect = 8e-08
 Identities = 16/45 (35%), Positives = 20/45 (44%)

Query: 46 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
          GR+       I D + F  +LG G  G V+   ERSSG     K 
Sbjct: 10 GRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKT 54

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  152 bits (387), Expect = 2e-39
 Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 174 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYKSLFK 228
           V+  T   +D Y     LG+G  G V    ++ +G+  A KV     +  K ++      
Sbjct: 17  VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES--LL 74

Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
            E+ ++ QL H N+++L++ +E K  F ++ E+  GGEL   +  +  ++E D A  IRQ
Sbjct: 75  REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ 134

Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLLLTDFGLSRRITSFGKLN 339
           +LSG+ YMH+  I H  L P +LL+       ++ + DFGLS    +  K+ 
Sbjct: 135 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK 186

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 90.5 bits (225), Expect = 7e-19
 Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 5/133 (3%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  VL G+ Y+H   + H +++P+N+++ S      +++ID G +        +   
Sbjct: 129  ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 188

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            I T    + APEVL       + DVWS GV+ Y+LLSG  PF G +E +  + V   +Y 
Sbjct: 189  IGTAY--YIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 245

Query: 1068 FEYL-FKELTQEA 1079
            FE   +K++++ A
Sbjct: 246  FELPQWKKVSESA 258

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 78.6 bits (194), Expect = 5e-15
 Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 23/175 (13%)

Query: 1098 NNIDHEFWHVKDLKRETNYTFRLSAKN----VI--GWSEKGIPSALFKTKE-----QAPE 1146
            N I H     +DLK E N      +K+    +I  G S     S   K K       APE
Sbjct: 145  NKIVH-----RDLKPE-NLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 198

Query: 1147 VLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL-FKELTQE 1205
            VL       + DVWS GV+ Y+LLSG  PF G +E +  + V   +Y FE   +K++++ 
Sbjct: 199  VL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 257

Query: 1206 ATRFLMLIFKRAPGKRPTVEECHENRWLV---PSEYMIKKRERAVFLGNRLKEFS 1257
            A   +  +    P  R +  +  ++ W+      +  +        +   +++F 
Sbjct: 258  AKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAI-LNIRQFQ 311

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 68.2 bits (167), Expect = 8e-12
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLL 522
           GGEL   +  +  ++E D A  IRQ+LSG+ YMH+  I H  L P +LL+       ++ 
Sbjct: 110 GGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIR 169

Query: 523 LTDFGLSRRITSFGKLN 539
           + DFGLS    +  K+ 
Sbjct: 170 IIDFGLSTHFEASKKMK 186

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 65.9 bits (161), Expect = 4e-11
 Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 9/123 (7%)

Query: 587 IEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE----YSHDTLHQVNT 642
           ++ ST   +D+Y+    + +G F  V+   +K  T    A K+              +  
Sbjct: 17  VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLR 75

Query: 643 EFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATI 702
           E   L+ L H  I  L E ++          LV E   G ++   + SR  ++E + A I
Sbjct: 76  EVQLLKQLDHPNIMKLYEFFE---DKGYFY-LVGEVYTGGELFDEIISRKRFSEVDAARI 131

Query: 703 ISQ 705
           I Q
Sbjct: 132 IRQ 134

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 54.3 bits (131), Expect = 2e-07
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 49 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
          V+  T   +D Y     LG+G  G V    ++ +G+  A KV
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKV 58

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  152 bits (386), Expect = 3e-39
 Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 3/166 (1%)

Query: 170 RGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLF 227
            G  + ++   +++ Y    +LG G  G V    ++ +    A K++  T       S  
Sbjct: 24  PGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKL 83

Query: 228 KNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIR 287
             E+ ++  L H N+++L+D +E K ++ ++ E   GGEL   +  +  + E D A  I+
Sbjct: 84  LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK 143

Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLLLTDFGLSRRI 332
           Q+LSG+ Y+H+ +I H  L P +LL+        + + DFGLS   
Sbjct: 144 QVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 90.5 bits (225), Expect = 8e-19
 Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 5/133 (3%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  VL G+ YLH   + H +++P+N+++ S      +K++D G +        +   
Sbjct: 139  AVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER 198

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            + T    + APEVL  +    + DVWS GV+ ++LL+G  PF GQ++ E  + V   +Y 
Sbjct: 199  LGTAY--YIAPEVL-RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT 255

Query: 1068 FEYL-FKELTQEA 1079
            F+   +K +++ A
Sbjct: 256  FDSPEWKNVSEGA 268

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 78.2 bits (193), Expect = 6e-15
 Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 7/119 (5%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL-FKEL 1202
            APEVL  +    + DVWS GV+ ++LL+G  PF GQ++ E  + V   +Y F+   +K +
Sbjct: 206  APEVL-RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNV 264

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL----VPSEYMIKKRERAVFLGNRLKEFS 1257
            ++ A   +  + +    +R + ++  E+ W+       E  I+    A  +   +++F 
Sbjct: 265  SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAI-ENMRKFQ 322

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 67.4 bits (165), Expect = 1e-11
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLL 522
           GGEL   +  +  + E D A  I+Q+LSG+ Y+H+ +I H  L P +LL+        + 
Sbjct: 120 GGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIK 179

Query: 523 LTDFGLSRRI 532
           + DFGLS   
Sbjct: 180 IVDFGLSAVF 189

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 65.9 bits (161), Expect = 5e-11
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 8/122 (6%)

Query: 587 IEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE---YSHDTLHQVNTE 643
           I       ++ YQ + ++  G +  V+   +K  T    A K+      S  +  ++  E
Sbjct: 28  ITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKV-THVERAIKIIRKTSVSTSSNSKLLEE 86

Query: 644 FDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATII 703
              L+ L H  I  L + ++      N   LVME  +G ++   +  R ++ E + A II
Sbjct: 87  VAVLKLLDHPNIMKLYDFFE---DKRNYY-LVMECYKGGELFDEIIHRMKFNEVDAAVII 142

Query: 704 SQ 705
            Q
Sbjct: 143 KQ 144

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 54.7 bits (132), Expect = 1e-07
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 45 RGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
           G  + ++   +++ Y    +LG G  G V    ++ +    A K+
Sbjct: 24 PGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKI 69

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  151 bits (382), Expect = 1e-38
 Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 14/180 (7%)

Query: 174 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV-------------MTGKG 220
           V+ +   I ++Y    +LG G  G V    E++     A KV                  
Sbjct: 27  VRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNI 86

Query: 221 NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEY 280
            ++     NE+ ++  L H N+++L D +E K  F +++E   GGEL   +  +  + E 
Sbjct: 87  EKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC 146

Query: 281 DIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLLLTDFGLSRRITSFGKLN 339
           D A+ ++Q+LSG+ Y+H+ +I H  + P ++L+ +     ++ + DFGLS   +   KL 
Sbjct: 147 DAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLR 206

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 90.1 bits (224), Expect = 1e-18
 Identities = 44/141 (31%), Positives = 79/141 (56%), Gaps = 7/141 (4%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  +L G+ YLH   + H +I+P+N+++ +  S + +K++D G +   +K   L   
Sbjct: 149  ANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR 208

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            + T    + APEVL ++    + DVWS GV+ Y+LL G  PF GQ++ +  + V   +Y 
Sbjct: 209  LGTAY--YIAPEVL-KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYY 265

Query: 1068 FEYL-FKELTQEATRFL--ML 1085
            F++  +K ++ EA   +  ML
Sbjct: 266  FDFNDWKNISDEAKELIKLML 286

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 80.9 bits (200), Expect = 1e-15
 Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL-FKEL 1202
            APEVL ++    + DVWS GV+ Y+LL G  PF GQ++ +  + V   +Y F++  +K +
Sbjct: 216  APEVL-KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNI 274

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLV----PSEYMIKKRERAVFLGNRLKEFS 1257
            + EA   + L+      KR T EE   +RW+           +K        + +++F 
Sbjct: 275  SDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGAL--SNMRKFE 331

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 68.2 bits (167), Expect = 1e-11
 Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLL 522
           GGEL   +  +  + E D A+ ++Q+LSG+ Y+H+ +I H  + P ++L+ +     ++ 
Sbjct: 130 GGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIK 189

Query: 523 LTDFGLSRRITSFGKLN 539
           + DFGLS   +   KL 
Sbjct: 190 IVDFGLSSFFSKDYKLR 206

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 62.8 bits (153), Expect = 4e-10
 Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 19/130 (14%)

Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK--------------LFEYSHD 635
                 + Y  + ++  G +  V+   EK    +  A K                +    
Sbjct: 30  KEGKIGESYFKVRKLGSGAYGEVLLCKEKN-GHSEKAIKVIKKSQFDKGRYSDDNKNIEK 88

Query: 636 TLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYT 695
              ++  E   L+SL H  I  L + ++          LV E  +G ++   + +RH++ 
Sbjct: 89  FHEEIYNEISLLKSLDHPNIIKLFDVFE---DKKYFY-LVTEFYEGGELFEQIINRHKFD 144

Query: 696 EQNVATIISQ 705
           E + A I+ Q
Sbjct: 145 ECDAANIMKQ 154

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 55.1 bits (133), Expect = 1e-07
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 49 VKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
          V+ +   I ++Y    +LG G  G V    E++     A KV
Sbjct: 27 VRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKV 68

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  146 bits (370), Expect = 2e-38
 Identities = 37/171 (21%), Positives = 85/171 (49%), Gaps = 7/171 (4%)

Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNE 230
            +Q+   +   TD Y+  +++G G   +    + +++   +A K++    ++ K     E
Sbjct: 10  VQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKII----DKSKRDPTEE 65

Query: 231 LDIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQL 289
           ++I+ +   H N++ L D Y+      +++EL  GGELL  + RQ +++E + +  +  +
Sbjct: 66  IEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTI 125

Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRRITSFGKL 338
              ++Y+H   + H  L P ++L     G    + + DFG ++++ +   L
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL 176

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 78.1 bits (193), Expect = 2e-15
 Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 8/127 (6%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR--SVQVKLIDLGCTQRVTKLGTLIH 1006
            +  + ++   ++YLH +G+ H +++P N++          +++ D G  +++     L+ 
Sbjct: 119  SAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM 178

Query: 1007 -PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ---SEPETRQNVN 1062
             P  T N  F APEVL  +      D+WS GVL Y +L+G +PF      +  E    + 
Sbjct: 179  TPCYTAN--FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG 236

Query: 1063 FVRYRFE 1069
              ++   
Sbjct: 237  SGKFSLS 243

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 68.9 bits (169), Expect = 2e-12
 Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 2/77 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHL 521
           GGELL  + RQ +++E + +  +  +   ++Y+H   + H  L P ++L     G    +
Sbjct: 100 GGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESI 159

Query: 522 LLTDFGLSRRITSFGKL 538
            + DFG ++++ +   L
Sbjct: 160 RICDFGFAKQLRAENGL 176

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 62.7 bits (153), Expect = 2e-10
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 10/130 (7%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ---SEPETRQNVNFVRYRF--EYL 1198
            APEVL  +      D+WS GVL Y +L+G +PF      +  E    +   ++     Y 
Sbjct: 188  APEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGY- 246

Query: 1199 FKELTQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEF 1256
            +  ++  A   +  ML     P +R T      + W+V  + + + +       + +K  
Sbjct: 247  WNSVSDTAKDLVSKML--HVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGA 304

Query: 1257 SDEYHDLKNK 1266
                +   N+
Sbjct: 305  MAATYSALNR 314

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 55.4 bits (134), Expect = 6e-08
 Identities = 8/46 (17%), Positives = 23/46 (50%)

Query: 46 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
           +Q+   +   TD Y+  +++G G   +    + +++   +A K++
Sbjct: 10 VQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKII 55

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 51.9 bits (125), Expect = 6e-07
 Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 9/117 (7%)

Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNL-R 648
           ++   TD Y+   +I  G +SV  +   KA T    A K+ +    +      E + L R
Sbjct: 16  NSIQFTDGYEVKEDIGVGSYSVCKRCIHKA-TNMEFAVKIID---KSKRDPTEEIEILLR 71

Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
             +H  I +L + Y        +  +V E ++G ++L  +  +  ++E+  + ++  
Sbjct: 72  YGQHPNIITLKDVYD---DGKYV-YVVTELMKGGELLDKILRQKFFSEREASAVLFT 124

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  145 bits (368), Expect = 2e-38
 Identities = 42/171 (24%), Positives = 83/171 (48%), Gaps = 3/171 (1%)

Query: 175 KTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI 233
            + +    D Y   ++ LG G    V   +   + + YA K++  +    +S    E+++
Sbjct: 4   DSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEM 63

Query: 234 MNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSG 292
           + Q   HRN++ L + +E +D F ++ E   GG +L  + ++ ++ E + +  ++ + S 
Sbjct: 64  LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASA 123

Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLNPLE 342
           LD++H   IAH  L P ++L  HP     + + DF L   I   G  +P+ 
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS 174

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 78.5 bits (194), Expect = 1e-15
 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 14/121 (11%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSV-QVKLIDLGCTQRVTKLGTLIHP 1007
            +  V  V   L +LH +G+ H +++P+N++      V  VK+ D        KL     P
Sbjct: 114  SVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLG-SGIKLNGDCSP 172

Query: 1008 INTPN-------PEFAAPEVLAEEPIFPQT-----DVWSAGVLAYVLLSGASPFRGQSEP 1055
            I+TP         E+ APEV+              D+WS GV+ Y+LLSG  PF G+   
Sbjct: 173  ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGS 232

Query: 1056 E 1056
            +
Sbjct: 233  D 233

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 70.4 bits (173), Expect = 6e-13
 Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL- 522
           GG +L  + ++ ++ E + +  ++ + S LD++H   IAH  L P ++L  HP     + 
Sbjct: 95  GGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVK 154

Query: 523 LTDFGLSRRITSFGKLNPLE 542
           + DF L   I   G  +P+ 
Sbjct: 155 ICDFDLGSGIKLNGDCSPIS 174

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 51.9 bits (125), Expect = 6e-07
 Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 25/113 (22%)

Query: 1144 APEVLAEEPIFPQT-----DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-- 1196
            APEV+              D+WS GV+ Y+LLSG  PF G+   +   +        +  
Sbjct: 189  APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM 248

Query: 1197 ---------YLF-----KELTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
                     Y F       ++  A   +  +L   R   +R +  +  ++ W+
Sbjct: 249  LFESIQEGKYEFPDKDWAHISCAAKDLISKLL--VRDAKQRLSAAQVLQHPWV 299

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 47.7 bits (114), Expect = 1e-05
 Identities = 11/63 (17%), Positives = 19/63 (30%), Gaps = 7/63 (11%)

Query: 50  KTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDN 108
            + +    D Y   ++ LG G    V   +   + + YA K+      I           
Sbjct: 4   DSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKI------IEKQPGHIRSRV 57

Query: 109 ENE 111
             E
Sbjct: 58  FRE 60

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 47.3 bits (113), Expect = 2e-05
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 8/114 (7%)

Query: 595 TDKYQFISE-IHRGKFSVVVKAAEKANTENLVAAKLFE-YSHDTLHQVNTEFDNLRSLR- 651
            D YQ   + +  G  + V        T    A K+ E        +V  E + L   + 
Sbjct: 11  EDVYQLQEDVLGEGAHARVQTCINLI-TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69

Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
           H  +  L+E ++          LV EK++G  +LS++  R  + E   + ++  
Sbjct: 70  HRNVLELIEFFE---EEDRFY-LVFEKMRGGSILSHIHKRRHFNELEASVVVQD 119

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  143 bits (363), Expect = 7e-38
 Identities = 45/168 (26%), Positives = 85/168 (50%), Gaps = 12/168 (7%)

Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---------TGKGNQYKS 225
              T    + Y+  + LGRGV+ +V   + + + + YA K++           +  + + 
Sbjct: 9   SHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE 68

Query: 226 LFKNELDIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAH 284
               E+DI+ ++  H N+++L D+YET   F ++ +L   GEL   LT +   +E +   
Sbjct: 69  ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128

Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            +R LL  +  +H+L+I H  L P ++L+      ++ LTDFG S ++
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQL 174

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 81.9 bits (203), Expect = 6e-17
 Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 24/134 (17%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-------TKL 1001
               + ++L+ +  LH   + H +++P+N+++     + +KL D G + ++          
Sbjct: 127  RKIMRALLEVICALHKLNIVHRDLKPENILLDD--DMNIKLTDFGFSCQLDPGEKLREVC 184

Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQSEP 1055
            GT         P + APE++               D+WS GV+ Y LL+G+ PF  + + 
Sbjct: 185  GT---------PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM 235

Query: 1056 ETRQNVNFVRYRFE 1069
               + +    Y+F 
Sbjct: 236  LMLRMIMSGNYQFG 249

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 66.1 bits (162), Expect = 1e-11
 Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 13/100 (13%)

Query: 1144 APEVLAEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-- 1195
            APE++               D+WS GV+ Y LL+G+ PF  + +    + +    Y+F  
Sbjct: 191  APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250

Query: 1196 EYLFKELTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
               + + +      +   L+    P KR T EE   + + 
Sbjct: 251  PE-WDDYSDTVKDLVSRFLV--VQPQKRYTAEEALAHPFF 287

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 65.7 bits (161), Expect = 2e-11
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
             GEL   LT +   +E +    +R LL  +  +H+L+I H  L P ++L+      ++ 
Sbjct: 107 KKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM--NIK 164

Query: 523 LTDFGLSRRI 532
           LTDFG S ++
Sbjct: 165 LTDFGFSCQL 174

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 54.2 bits (131), Expect = 1e-07
 Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 50  KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNE 109
              T    + Y+  + LGRGV+ +V   + + + + YA K++             V++  
Sbjct: 9   SHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIID-VTGGGSFSAEEVQELR 67

Query: 110 NE 111
             
Sbjct: 68  EA 69

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 52.3 bits (126), Expect = 4e-07
 Identities = 29/131 (22%), Positives = 49/131 (37%), Gaps = 16/131 (12%)

Query: 586 PIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF----------EYSHD 635
           P   ST    + Y+    + RG  SVV +   K  T    A K+           E   +
Sbjct: 7   PGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKP-TCKEYAVKIIDVTGGGSFSAEEVQE 65

Query: 636 TLHQVNTEFDNLRSL-RHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEY 694
                  E D LR +  H  I  L + Y+   T +    LV + ++  ++  YL+ +   
Sbjct: 66  LREATLKEVDILRKVSGHPNIIQLKDTYE---TNTFF-FLVFDLMKKGELFDYLTEKVTL 121

Query: 695 TEQNVATIISQ 705
           +E+    I+  
Sbjct: 122 SEKETRKIMRA 132

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  144 bits (366), Expect = 3e-37
 Identities = 43/212 (20%), Positives = 89/212 (41%), Gaps = 10/212 (4%)

Query: 137 GDELGRGVTGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVT 196
            + +G+G    ++++  + +  + N+                K + D Y     LG G  
Sbjct: 89  TELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGAC 148

Query: 197 GIVYHAVERSSGRNYAAKV--------MTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDS 248
           G V  A ER + +  A ++         + +        + E++I+ +L H  ++++ + 
Sbjct: 149 GEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 208

Query: 249 YETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTP 308
           ++ +D + I+ EL  GGEL   +       E     Y  Q+L  + Y+H   I H  L P
Sbjct: 209 FDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 267

Query: 309 GDLLVAHPG-GRHLLLTDFGLSRRITSFGKLN 339
            ++L++       + +TDFG S+ +     + 
Sbjct: 268 ENVLLSSQEEDCLIKITDFGHSKILGETSLMR 299

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 77.0 bits (190), Expect = 1e-14
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 20/120 (16%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRV-------TK 1000
                  +L  +QYLH  G+ H +++P+NV+++S      +K+ D G ++ +       T 
Sbjct: 242  KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 301

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIF---PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
             GT         P + APEVL            D WS GV+ ++ LSG  PF       +
Sbjct: 302  CGT---------PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS 352

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 68.2 bits (167), Expect = 8e-12
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 1/78 (1%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHL 521
            GGEL   +       E     Y  Q+L  + Y+H   I H  L P ++L++       +
Sbjct: 222 EGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLI 281

Query: 522 LLTDFGLSRRITSFGKLN 539
            +TDFG S+ +     + 
Sbjct: 282 KITDFGHSKILGETSLMR 299

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 62.4 bits (152), Expect = 4e-10
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 9/97 (9%)

Query: 1144 APEVLAEEPIF---PQTDVWSAGVLAYVLLSGASPFRGQSEPET-RQNVNFVRYRFEYLF 1199
            APEVL            D WS GV+ ++ LSG  PF       + +  +   +Y F    
Sbjct: 309  APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 368

Query: 1200 -KELTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
              E++++A   +  +L+    P  R T EE   + WL
Sbjct: 369  WAEVSEKALDLVKKLLV--VDPKARFTTEEALRHPWL 403

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 58.6 bits (142), Expect = 8e-09
 Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 15/135 (11%)

Query: 580 YSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE-------- 631
           + +         +   D+Y     +  G    V  A E+  T   VA ++          
Sbjct: 119 FDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERK-TCKKVAIRIISKRKFAIGS 177

Query: 632 -YSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSS 690
               D    V TE + L+ L H  I  +   +           +V+E ++G ++   +  
Sbjct: 178 AREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVVG 232

Query: 691 RHEYTEQNVATIISQ 705
                E        Q
Sbjct: 233 NKRLKEATCKLYFYQ 247

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 50.1 bits (120), Expect = 3e-06
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 52  RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 90
             K + D Y     LG G  G V  A ER + +  A ++
Sbjct: 129 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRI 167

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  142 bits (359), Expect = 4e-37
 Identities = 38/167 (22%), Positives = 79/167 (47%), Gaps = 8/167 (4%)

Query: 177 RTKPITDAYDFG---DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI 233
           +  P    YD       LG G   I    V + S + +A K+++ +    ++  + E+  
Sbjct: 2   KDSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITA 58

Query: 234 MNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSG 292
           +     H N+V+LH+ +  +    ++ EL  GGEL   + ++ +++E + ++ +R+L+S 
Sbjct: 59  LKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSA 118

Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGR-HLLLTDFGLSRRITSFGKL 338
           + +MH + + H  L P +LL         + + DFG +R      + 
Sbjct: 119 VSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP 165

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 80.8 bits (200), Expect = 3e-16
 Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 6/109 (5%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSV-QVKLIDLGCTQRVTKLGTLIHP 1007
            +Y +  ++  + ++H  G+ H +++P+N++        ++K+ID G  +          P
Sbjct: 109  SYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN---QP 165

Query: 1008 INTP--NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
            + TP     +AAPE+L +       D+WS GV+ Y +LSG  PF+    
Sbjct: 166  LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDR 214

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 71.9 bits (177), Expect = 2e-13
 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLL 522
           GGEL   + ++ +++E + ++ +R+L+S + +MH + + H  L P +LL         + 
Sbjct: 90  GGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIK 149

Query: 523 LTDFGLSRRITSFGKL 538
           + DFG +R      + 
Sbjct: 150 IIDFGFARLKPPDNQP 165

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 60.0 bits (146), Expect = 1e-09
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 14/101 (13%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFV-------RYRF- 1195
            APE+L +       D+WS GV+ Y +LSG  PF+      T  +   +        + F 
Sbjct: 177  APELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE 236

Query: 1196 -EYLFKELTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
             E  +K ++QEA   +  +L     P KR  +     N WL
Sbjct: 237  GEA-WKNVSQEAKDLIQGLL--TVDPNKRLKMSGLRYNEWL 274

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 50.8 bits (122), Expect = 1e-06
 Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 11/119 (9%)

Query: 591 TEPPTDKYQFIS---EIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNL 647
             P    Y        +  G FS+  K   K  +    A K+             E   L
Sbjct: 3   DSPFYQHYDLDLKDKPLGEGSFSICRKCVHKK-SNQAFAVKIISKRM--EANTQKEITAL 59

Query: 648 RSLR-HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
           +    H  I  L E +       +   LVME L G ++   +  +  ++E   + I+ +
Sbjct: 60  KLCEGHPNIVKLHEVFH---DQLHT-FLVMELLNGGELFERIKKKKHFSETEASYIMRK 114

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 47.7 bits (114), Expect = 2e-05
 Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 3/42 (7%)

Query: 52 RTKPITDAYDFG---DELGRGVTGIVYHAVERSSGRNYAAKV 90
          +  P    YD       LG G   I    V + S + +A K+
Sbjct: 2  KDSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKI 43

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  141 bits (357), Expect = 7e-37
 Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 10/164 (6%)

Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV--------MTGKGNQYKSLFKNE 230
           K + D Y     LG G  G V  A ER + +  A K+         + +        + E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65

Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           ++I+ +L H  ++++ + ++ +D + I+ EL  GGEL   +       E     Y  Q+L
Sbjct: 66  IEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124

Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRIT 333
             + Y+H   I H  L P ++L++      L+ +TDFG S+ + 
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 75.4 bits (186), Expect = 1e-14
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 20/120 (16%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRV-------TK 1000
                  +L  +QYLH  G+ H +++P+NV+++S      +K+ D G ++ +       T 
Sbjct: 117  KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIF---PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
             GT         P + APEVL            D WS GV+ ++ LSG  PF       +
Sbjct: 177  CGT---------PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS 227

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 66.9 bits (164), Expect = 9e-12
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL   +       E     Y  Q+L  + Y+H   I H  L P ++L++      L+
Sbjct: 97  EGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLI 156

Query: 523 -LTDFGLSRRIT 533
            +TDFG S+ + 
Sbjct: 157 KITDFGHSKILG 168

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 62.3 bits (152), Expect = 3e-10
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 11/98 (11%)

Query: 1144 APEVLAEEPIF---PQTDVWSAGVLAYVLLSGASPFRGQSEPET-RQNVNFVRYRF--EY 1197
            APEVL            D WS GV+ ++ LSG  PF       + +  +   +Y F  E 
Sbjct: 184  APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243

Query: 1198 LFKELTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
             + E++++A   +  +L+    P  R T EE   + WL
Sbjct: 244  -WAEVSEKALDLVKKLLV--VDPKARFTTEEALRHPWL 278

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 56.9 bits (138), Expect = 1e-08
 Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 15/120 (12%)

Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF---------EYSHDTLHQVNTEFD 645
            D+Y     +  G    V  A E+  T   VA K+              D    V TE +
Sbjct: 9   RDEYIMSKTLGSGACGEVKLAFERK-TCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67

Query: 646 NLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
            L+ L H  I  +   +     A +   +V+E ++G ++   +       E        Q
Sbjct: 68  ILKKLNHPCIIKIKNFFD----AEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 49.2 bits (118), Expect = 4e-06
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 54  KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNEN 110
           K + D Y     LG G  G V  A ER + +  A K+++ K   +       +   N
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALN 61

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  141 bits (356), Expect = 3e-36
 Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 11/167 (6%)

Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--------TGKGNQYKSL 226
               K     YD  D +GRGV+ +V   V R++G  +A K+M          +  + +  
Sbjct: 86  WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA 145

Query: 227 FKNELDIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHY 285
            + E  I+ Q+  H +++ L DSYE+     ++ +L   GEL   LT +   +E +    
Sbjct: 146 TRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSI 205

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           +R LL  + ++H  +I H  L P ++L+       + L+DFG S  +
Sbjct: 206 MRSLLEAVSFLHANNIVHRDLKPENILLD--DNMQIRLSDFGFSCHL 250

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 78.2 bits (193), Expect = 3e-15
 Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 24/134 (17%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-------TKL 1001
               + S+L+ + +LH   + H +++P+N+++    ++Q++L D G +  +          
Sbjct: 203  RSIMRSLLEAVSFLHANNIVHRDLKPENILLDD--NMQIRLSDFGFSCHLEPGEKLRELC 260

Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQSEP 1055
            GT         P + APE+L               D+W+ GV+ + LL+G+ PF  + + 
Sbjct: 261  GT---------PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI 311

Query: 1056 ETRQNVNFVRYRFE 1069
               + +   +Y+F 
Sbjct: 312  LMLRMIMEGQYQFS 325

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 64.7 bits (158), Expect = 6e-11
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
             GEL   LT +   +E +    +R LL  + ++H  +I H  L P ++L+       + 
Sbjct: 183 RKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD--DNMQIR 240

Query: 523 LTDFGLSRRI 532
           L+DFG S  +
Sbjct: 241 LSDFGFSCHL 250

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 62.0 bits (151), Expect = 5e-10
 Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 13/100 (13%)

Query: 1144 APEVLAEEPIFPQT------DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-- 1195
            APE+L               D+W+ GV+ + LL+G+ PF  + +    + +   +Y+F  
Sbjct: 267  APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS 326

Query: 1196 EYLFKELTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
               + + +      +  +L     P  R T E+  ++ + 
Sbjct: 327  PE-WDDRSSTVKDLISRLLQ--VDPEARLTAEQALQHPFF 363

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 53.2 bits (128), Expect = 3e-07
 Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 16/163 (9%)

Query: 554 PAMKHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPP-TDKYQFISEIHRGKFSVV 612
            A    +A       P   ++    +   ED   +W+       KY     I RG  SVV
Sbjct: 51  SANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVV 110

Query: 613 VKAAEKANTENLVAAKLF---------EYSHDTLHQVNTEFDNLRSLR-HERIASLLEAY 662
            +   +A T +  A K+          E   +       E   LR +  H  I +L+++Y
Sbjct: 111 RRCVHRA-TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169

Query: 663 KPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
           +   ++S +  LV + ++  ++  YL+ +   +E+   +I+  
Sbjct: 170 E---SSSFM-FLVFDLMRKGELFDYLTEKVALSEKETRSIMRS 208

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 52.4 bits (126), Expect = 6e-07
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 50  KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGTISHSVTVHVED 107
               K     YD  D +GRGV+ +V   V R++G  +A K+M  T +      +    E 
Sbjct: 86  WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA 145

Query: 108 NENE 111
              E
Sbjct: 146 TRRE 149

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  139 bits (352), Expect = 4e-36
 Identities = 43/205 (20%), Positives = 72/205 (35%), Gaps = 45/205 (21%)

Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYKSLFKN 229
                 +   Y     +G+G  G+V  A+E  +    A K+     +     +     K 
Sbjct: 18  GGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT 77

Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLH-------------------- 269
           E+ +M +L H N+ RL++ YE +    ++ EL  GG LL                     
Sbjct: 78  EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137

Query: 270 --------------------SLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 309
                                 +      E  I++ +RQ+ S L Y+H   I H  + P 
Sbjct: 138 QICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPE 197

Query: 310 DLLVAHPGGRHLLLTDFGLSRRITS 334
           + L +      + L DFGLS+    
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYK 222

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  100 bits (250), Expect = 1e-22
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 23/175 (13%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            +  +  +   L YLH +G+CH +I+P+N + ++ +S ++KL+D G ++   KL    +  
Sbjct: 171  SNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYG 230

Query: 1009 NTPN---PEFAAPEVL--AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF 1063
             T     P F APEVL    E   P+ D WSAGVL ++LL GA PF G ++ +T   V  
Sbjct: 231  MTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN 290

Query: 1064 VRYRFEY-LFKELTQEATRFL--ML------------IFKHEVDWIT-LANNIDH 1102
             +  FE   +  L+  A   L  +L              +H   WI+  ++ I  
Sbjct: 291  KKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHP--WISQFSDKIYK 343

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 77.6 bits (191), Expect = 4e-15
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 3/93 (3%)

Query: 1144 APEVL--AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFK 1200
            APEVL    E   P+ D WSAGVL ++LL GA PF G ++ +T   V   +  FE   + 
Sbjct: 242  APEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYN 301

Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
             L+  A   L  +  R   +R       ++ W+
Sbjct: 302  VLSPLARDLLSNLLNRNVDERFDAMRALQHPWI 334

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 67.2 bits (164), Expect = 8e-12
 Identities = 19/76 (25%), Positives = 30/76 (39%)

Query: 459 PNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
                G       +      E  I++ +RQ+ S L Y+H   I H  + P + L +    
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS 206

Query: 519 RHLLLTDFGLSRRITS 534
             + L DFGLS+    
Sbjct: 207 FEIKLVDFGLSKEFYK 222

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 66.8 bits (163), Expect = 1e-11
 Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 11/151 (7%)

Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK------LFEYSHDTLHQVNTEFDNLR 648
             KY     I +G + VV  A E   T  + A K      + + +   + ++ TE   ++
Sbjct: 25  QKKYHLKGAIGQGSYGVVRVAIENQ-TRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83

Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE 708
            L H  IA L E Y+       I  LVME   G  +L  L+   + +    A  + +   
Sbjct: 84  KLHHPNIARLYEVYE---DEQYI-CLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQI 139

Query: 709 HYLKKNREQIADTADKSRIPRTIREYREQSA 739
               +  E+  + +            RE+  
Sbjct: 140 CPCPECNEEAINGSIHGFRESLDFVQREKLI 170

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 56.0 bits (135), Expect = 3e-08
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 50  KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNE 109
                 +   Y     +G+G  G+V  A+E  +    A K+M  K  I       VE  +
Sbjct: 18  GGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMN-KNKIRQINPKDVERIK 76

Query: 110 NE 111
            E
Sbjct: 77  TE 78

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  133 bits (337), Expect = 4e-34
 Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 14/172 (8%)

Query: 171 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN 229
            +  + +   +TD Y    + LG GV G V     R +G+  A K++           + 
Sbjct: 16  FQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY-D----SPKARQ 70

Query: 230 ELDIMNQLC-HRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDI 282
           E+D   Q     ++V + D YE     K    II E   GGEL   +  +    +TE + 
Sbjct: 71  EVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREA 130

Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLLLTDFGLSRRIT 333
           A  +R + + + ++H  +IAH  + P +LL         L LTDFG ++  T
Sbjct: 131 AEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 82.8 bits (205), Expect = 6e-17
 Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 4/114 (3%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSV-QVKLIDLGCTQRVTKLGTLIHP 1007
            A  +  +   +Q+LH   + H +++P+N++  S      +KL D G   + T    L  P
Sbjct: 131  AEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA-KETTQNALQTP 189

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
              TP   + APEVL  E      D+WS GV+ Y+LL G  PF   +       +
Sbjct: 190  CYTPY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM 241

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 65.4 bits (160), Expect = 3e-11
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)

Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-H 520
           GGEL   +  +    +TE + A  +R + + + ++H  +IAH  + P +LL         
Sbjct: 110 GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAV 169

Query: 521 LLLTDFGLSRRIT 533
           L LTDFG ++  T
Sbjct: 170 LKLTDFGFAKETT 182

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 61.6 bits (150), Expect = 5e-10
 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE----PETRQNVNFVRYRF--EY 1197
            APEVL  E      D+WS GV+ Y+LL G  PF   +     P  ++ +   +Y F    
Sbjct: 197  APEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 256

Query: 1198 LFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
             + E++++A + + L+ K  P +R T+ +   + W+
Sbjct: 257  -WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 55.8 bits (135), Expect = 3e-08
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 7/128 (5%)

Query: 581 SVEDSPIEWSTEPPTDKYQFISE-IHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQ 639
            V     E      TD YQ   + +  G    V++   +  T    A KL   S     +
Sbjct: 13  EVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRR-TGQKCALKLLYDSPKARQE 71

Query: 640 VNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR--HEYTEQ 697
           V+      ++     I  +L+ Y+         +++ME ++G ++ S +  R    +TE+
Sbjct: 72  VDHH---WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTER 128

Query: 698 NVATIISQ 705
             A I+  
Sbjct: 129 EAAEIMRD 136

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 51.2 bits (123), Expect = 1e-06
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 46 GRQVKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKV 90
           +  + +   +TD Y    + LG GV G V     R +G+  A K+
Sbjct: 16 FQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKL 61

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  129 bits (326), Expect = 8e-33
 Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 8/167 (4%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLCH 239
               +   D LG+G T  V+    + +G  +A KV       +   +   E +++ +L H
Sbjct: 7   SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66

Query: 240 RNLVRLHDSYE--TKDSFTIISELAGGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLD 294
           +N+V+L    E  T     +I E    G L   L   +      E +    +R ++ G++
Sbjct: 67  KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126

Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSRRITSFGKLN 339
           ++    I H  + PG+++         +  LTDFG +R +    +  
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 77.9 bits (192), Expect = 2e-15
 Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 26/124 (20%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVR--SVQVKLIDLGC-------TQRVTKLGTLI 1005
            V+ G+ +L   G+ H NI+P N++           KL D G         Q V+  GT  
Sbjct: 121  VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGT-- 178

Query: 1006 HPINTPNPEFAAPEVLAEEPIF--------PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
                    E+  P++     +            D+WS GV  Y   +G+ PFR    P  
Sbjct: 179  -------EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231

Query: 1058 RQNV 1061
             + V
Sbjct: 232  NKEV 235

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 65.2 bits (159), Expect = 3e-11
 Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 463 PGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
           P G L   L   +      E +    +R ++ G++++    I H  + PG+++       
Sbjct: 92  PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDG 151

Query: 520 HLL--LTDFGLSRRITSFGKLN 539
             +  LTDFG +R +    +  
Sbjct: 152 QSVYKLTDFGAARELEDDEQFV 173

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 62.1 bits (151), Expect = 3e-10
 Identities = 25/127 (19%), Positives = 48/127 (37%), Gaps = 10/127 (7%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH--DTLHQVNTEFDNLRSLRHE 653
             +     + +G  + V +   K  T +L A K+F        +     EF+ L+ L H+
Sbjct: 9   HLWLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHK 67

Query: 654 RIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR---HEYTEQNVATIISQAWE-- 708
            I  L    +  TT  +  VL+ME      + + L      +   E     ++       
Sbjct: 68  NIVKLFAIEE-ETTTRHK-VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125

Query: 709 HYLKKNR 715
           ++L++N 
Sbjct: 126 NHLRENG 132

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 57.1 bits (138), Expect = 1e-08
 Identities = 19/125 (15%), Positives = 32/125 (25%), Gaps = 34/125 (27%)

Query: 1144 APEVLAEEPIF--------PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV------- 1188
             P++     +            D+WS GV  Y   +G+ PFR    P   + V       
Sbjct: 183  HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242

Query: 1189 -------------------NFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
                               +        L + L    T  L  I +    K    ++   
Sbjct: 243  KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302

Query: 1230 NRWLV 1234
                +
Sbjct: 303  ETSDI 307

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 44.0 bits (104), Expect = 2e-04
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
              +   D LG+G T  V+    + +G  +A KV 
Sbjct: 7  SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVF 42

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  124 bits (313), Expect = 3e-31
 Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 14/164 (8%)

Query: 174 VKTRTKPITDAYD-FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD 232
           ++ +   I D Y      LG G+ G V     + +   +A K++     Q     + E++
Sbjct: 8   LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVE 62

Query: 233 IMNQLC-HRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHY 285
           +  +     ++VR+ D YE     +    I+ E   GGEL   +  +    +TE + +  
Sbjct: 63  LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 122

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGL 328
           ++ +   + Y+H ++IAH  + P +LL        +L LTDFG 
Sbjct: 123 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 65.0 bits (159), Expect = 3e-11
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 24/114 (21%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHP 1007
            +  + S+ + +QYLH   + H +++P+N++  S R +  +KL D G              
Sbjct: 120  SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF------------- 166

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
                     A E   E       D+WS GV+ Y+LL G  PF           +
Sbjct: 167  ---------AKETTGE-KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 210

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 60.0 bits (146), Expect = 1e-09
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
           GGEL   +  +    +TE + +  ++ +   + Y+H ++IAH  + P +LL        +
Sbjct: 99  GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 158

Query: 522 L-LTDFGL 528
           L LTDFG 
Sbjct: 159 LKLTDFGF 166

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 56.9 bits (138), Expect = 1e-08
 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 12/98 (12%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLF--- 1199
            A E   E       D+WS GV+ Y+LL G  PF           +   R R  +Y F   
Sbjct: 167  AKETTGE-KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM-KTRIRMGQYEFPNP 224

Query: 1200 --KELTQEATRFL--MLIFKRAPGKRPTVEECHENRWL 1233
               E+++E    +  +L  K  P +R T+ E   + W+
Sbjct: 225  EWSEVSEEVKMLIRNLL--KTEPTQRMTITEFMNHPWI 260

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 53.5 bits (129), Expect = 2e-07
 Identities = 24/125 (19%), Positives = 50/125 (40%), Gaps = 7/125 (5%)

Query: 584 DSPIEWSTEPPTDKYQFISE-IHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNT 642
            S ++       D Y+  S+ +  G    V++   K  T+   A K+ +       +V  
Sbjct: 5   KSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKR-TQEKFALKMLQDCPKARREVEL 63

Query: 643 EFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR--HEYTEQNVA 700
                R+ +   I  +++ Y+         ++VME L G ++ S +  R    +TE+  +
Sbjct: 64  H---WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 120

Query: 701 TIISQ 705
            I+  
Sbjct: 121 EIMKS 125

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 46.9 bits (112), Expect = 3e-05
 Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 49 VKTRTKPITDAYD-FGDELGRGVTGIVYHAVERSSGRNYAAKV 90
          ++ +   I D Y      LG G+ G V     + +   +A K+
Sbjct: 8  LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM 50

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  126 bits (318), Expect = 3e-31
 Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 8/167 (4%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCH 239
               +   D LG+G T  V+    + +G  +A KV       +   +   E +++ +L H
Sbjct: 7   SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66

Query: 240 RNLVRLHDSYE--TKDSFTIISELAGGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLD 294
           +N+V+L    E  T     +I E    G L   L   +      E +    +R ++ G++
Sbjct: 67  KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126

Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLL--LTDFGLSRRITSFGKLN 339
           ++    I H  + PG+++         +  LTDFG +R +    +  
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 76.4 bits (188), Expect = 1e-14
 Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 26/124 (20%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVR--SVQVKLIDLGC-------TQRVTKLGTLI 1005
            V+ G+ +L   G+ H NI+P N++           KL D G         Q V+  GT  
Sbjct: 121  VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGT-- 178

Query: 1006 HPINTPNPEFAAPEVLAEEPIF--------PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
                    E+  P++     +            D+WS GV  Y   +G+ PFR    P  
Sbjct: 179  -------EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231

Query: 1058 RQNV 1061
             + V
Sbjct: 232  NKEV 235

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 63.3 bits (154), Expect = 2e-10
 Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 463 PGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
           P G L   L   +      E +    +R ++ G++++    I H  + PG+++       
Sbjct: 92  PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDG 151

Query: 520 HLL--LTDFGLSRRITSFGKLN 539
             +  LTDFG +R +    +  
Sbjct: 152 QSVYKLTDFGAARELEDDEQFV 173

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 60.6 bits (147), Expect = 1e-09
 Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 10/127 (7%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH--DTLHQVNTEFDNLRSLRHE 653
             +     + +G  + V +   K  T +L A K+F        +     EF+ L+ L H+
Sbjct: 9   HLWLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHK 67

Query: 654 RIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR---HEYTEQNVATIISQAWE-- 708
            I  L    + +T  +   VL+ME      + + L      +   E     ++       
Sbjct: 68  NIVKLFAIEEETT--TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125

Query: 709 HYLKKNR 715
           ++L++N 
Sbjct: 126 NHLRENG 132

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 58.7 bits (142), Expect = 5e-09
 Identities = 25/180 (13%), Positives = 47/180 (26%), Gaps = 46/180 (25%)

Query: 1144 APEVLAEEPIF--------PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV------- 1188
             P++     +            D+WS GV  Y   +G+ PFR    P   + V       
Sbjct: 183  HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242

Query: 1189 ------------NFVRYRFEY-------LFKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
                              +         L + L    T  L  I +    K    ++   
Sbjct: 243  KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302

Query: 1230 NRWLVPSEYMIKKRERAVFLGNRLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQEE 1289
                +    +I      VF   ++       H         ++ +  H+ + +   I   
Sbjct: 303  ETSDILHRMVIH-----VFSLQQMTAHKIYIHS-------YNTATIFHELVYKQTKIISS 350

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 43.3 bits (102), Expect = 4e-04
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
              +   D LG+G T  V+    + +G  +A KV 
Sbjct: 7  SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVF 42

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  126 bits (318), Expect = 4e-31
 Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 14/175 (8%)

Query: 174 VKTRTKPITDAYD-FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD 232
           ++ +   I D Y      LG G+ G V     + +   +A K++     Q     + E++
Sbjct: 52  LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVE 106

Query: 233 IMNQLC-HRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHY 285
           +  +     ++VR+ D YE     +    I+ E   GGEL   +  +    +TE + +  
Sbjct: 107 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 166

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLN 339
           ++ +   + Y+H ++IAH  + P +LL        +L LTDFG ++  TS   L 
Sbjct: 167 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 221

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 83.2 bits (206), Expect = 8e-17
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 3/114 (2%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSV-QVKLIDLGCTQRVTKLGTLIHP 1007
            +  + S+ + +QYLH   + H +++P+N++  S R    +KL D G  +  T   +L  P
Sbjct: 164  SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 223

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
              TP   + APEVL  E      D+WS GV+ Y+LL G  PF           +
Sbjct: 224  CYTPY--YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 275

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 65.1 bits (159), Expect = 5e-11
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)

Query: 464 GGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
           GGEL   +  +    +TE + +  ++ +   + Y+H ++IAH  + P +LL        +
Sbjct: 143 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 202

Query: 522 L-LTDFGLSRRITSFGKLN 539
           L LTDFG ++  TS   L 
Sbjct: 203 LKLTDFGFAKETTSHNSLT 221

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 60.9 bits (148), Expect = 1e-09
 Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 14/131 (10%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLF--- 1199
            APEVL  E      D+WS GV+ Y+LL G  PF           +   R R  +Y F   
Sbjct: 231  APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM-KTRIRMGQYEFPNP 289

Query: 1200 --KELTQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKE 1255
               E+++E    +  +L  K  P +R T+ E   + W++ S    K  +  +     LKE
Sbjct: 290  EWSEVSEEVKMLIRNLL--KTEPTQRMTITEFMNHPWIMQST---KVPQTPLHTSRVLKE 344

Query: 1256 FSDEYHDLKNK 1266
              + + D+K +
Sbjct: 345  DKERWEDVKEE 355

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 52.0 bits (125), Expect = 8e-07
 Identities = 28/152 (18%), Positives = 55/152 (36%), Gaps = 10/152 (6%)

Query: 557 KHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISE-IHRGKFSVVVKA 615
                   A   P   Q  P  +     S ++       D Y+  S+ +  G    V++ 
Sbjct: 25  TPALPHPPAQPPPPPPQQFPQFHV---KSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQI 81

Query: 616 AEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLV 675
             K  T+   A K+ +       +V       R+ +   I  +++ Y+         ++V
Sbjct: 82  FNKR-TQEKFALKMLQDCPKARREVELH---WRASQCPHIVRIVDVYENLYAGRKCLLIV 137

Query: 676 MEKLQGADVLSYLSSR--HEYTEQNVATIISQ 705
           ME L G ++ S +  R    +TE+  + I+  
Sbjct: 138 MECLDGGELFSRIQDRGDQAFTEREASEIMKS 169

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 45.9 bits (109), Expect = 7e-05
 Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 49 VKTRTKPITDAYD-FGDELGRGVTGIVYHAVERSSGRNYAAKV 90
          ++ +   I D Y      LG G+ G V     + +   +A K+
Sbjct: 52 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM 94

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  120 bits (303), Expect = 1e-29
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 7/158 (4%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHR 240
           Y  G  LG+G     +   +  +   +A K++      K +Q + +   E+ I   L H+
Sbjct: 43  YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ 101

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           ++V  H  +E  D   ++ EL     LL    R+   TE +  +Y+RQ++ G  Y+HR  
Sbjct: 102 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 161

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
           + H  L  G+L +       + + DFGL+ ++   G+ 
Sbjct: 162 VIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGER 197

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 79.3 bits (196), Expect = 1e-15
 Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 11/153 (7%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI-NTPNP 1013
            ++ G QYLH   + H +++  N+ +     ++VK+ D G   +V   G     +  TPN 
Sbjct: 150  IVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGERKKVLCGTPN- 206

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
             + APEVL+++    + DVWS G + Y LL G  PF      ET   +    Y      K
Sbjct: 207  -YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---K 262

Query: 1074 ELTQEATRFL--MLIFKHEVDWITLANNIDHEF 1104
             +   A   +  ML         T+   ++ EF
Sbjct: 263  HINPVAASLIQKMLQ-TDPTARPTINELLNDEF 294

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 71.2 bits (175), Expect = 4e-13
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 3/89 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APEVL+++    + DVWS G + Y LL G  PF      ET   +    Y      K + 
Sbjct: 209  APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---KHIN 265

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRW 1232
              A   +  + +  P  RPT+ E   + +
Sbjct: 266  PVAASLIQKMLQTDPTARPTINELLNDEF 294

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 65.0 bits (159), Expect = 4e-11
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
               LL    R+   TE +  +Y+RQ++ G  Y+HR  + H  L  G+L +       + 
Sbjct: 124 RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL--EVK 181

Query: 523 LTDFGLSRRITSFGKL 538
           + DFGL+ ++   G+ 
Sbjct: 182 IGDFGLATKVEYDGER 197

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 48.5 bits (116), Expect = 9e-06
 Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 10/148 (6%)

Query: 563 TEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPT-DKYQFISEIHRGKFSVVVKAAEKANT 621
                 P +A    P          E   +P +  +Y     + +G F+        A+T
Sbjct: 7   PGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKC-FEISDADT 65

Query: 622 ENLVAAKLFE----YSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVME 677
           + + A K+             +++ E    RSL H+ +      ++       +  +V+E
Sbjct: 66  KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE---DNDFV-FVVLE 121

Query: 678 KLQGADVLSYLSSRHEYTEQNVATIISQ 705
             +   +L     R   TE      + Q
Sbjct: 122 LCRRRSLLELHKRRKALTEPEARYYLRQ 149

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  118 bits (299), Expect = 2e-29
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 7/158 (4%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHR 240
           Y  G  LG+G     +   +  +   +A K++      K +Q + +   E+ I   L H+
Sbjct: 17  YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ 75

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           ++V  H  +E  D   ++ EL     LL    R+   TE +  +Y+RQ++ G  Y+HR  
Sbjct: 76  HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 135

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
           + H  L  G+L +       + + DFGL+ ++   G+ 
Sbjct: 136 VIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGER 171

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 78.4 bits (194), Expect = 1e-15
 Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 11/153 (7%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI-NTPNP 1013
            ++ G QYLH   + H +++  N+ +     ++VK+ D G   +V   G     +  TPN 
Sbjct: 124  IVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGERKKVLCGTPN- 180

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
             + APEVL+++    + DVWS G + Y LL G  PF      ET   +    Y      K
Sbjct: 181  -YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---K 236

Query: 1074 ELTQEATRFL--MLIFKHEVDWITLANNIDHEF 1104
             +   A   +  ML         T+   ++ EF
Sbjct: 237  HINPVAASLIQKMLQ-TDPTARPTINELLNDEF 268

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 70.3 bits (173), Expect = 5e-13
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 3/89 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APEVL+++    + DVWS G + Y LL G  PF      ET   +    Y      K + 
Sbjct: 183  APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---KHIN 239

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRW 1232
              A   +  + +  P  RPT+ E   + +
Sbjct: 240  PVAASLIQKMLQTDPTARPTINELLNDEF 268

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 64.5 bits (158), Expect = 4e-11
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
               LL    R+   TE +  +Y+RQ++ G  Y+HR  + H  L  G+L +       + 
Sbjct: 98  RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL--EVK 155

Query: 523 LTDFGLSRRITSFGKL 538
           + DFGL+ ++   G+ 
Sbjct: 156 IGDFGLATKVEYDGER 171

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 44.1 bits (105), Expect = 2e-04
 Identities = 21/128 (16%), Positives = 43/128 (33%), Gaps = 17/128 (13%)

Query: 590 STEPPT--------DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE----YSHDTL 637
           + E P          +Y     + +G F+        A+T+ + A K+            
Sbjct: 1   AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKC-FEISDADTKEVFAGKIVPKSLLLKPHQR 59

Query: 638 HQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQ 697
            +++ E    RSL H+ +      ++       +  +V+E  +   +L     R   TE 
Sbjct: 60  EKMSMEISIHRSLAHQHVVGFHGFFE---DNDFV-FVVLELCRRRSLLELHKRRKALTEP 115

Query: 698 NVATIISQ 705
                + Q
Sbjct: 116 EARYYLRQ 123

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  117 bits (295), Expect = 5e-29
 Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 13/165 (7%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHR 240
           ++ G  LG+G  G VY A E+ S    A KV+      K      L + E++I + L H 
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHP 69

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           N++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H   
Sbjct: 70  NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS------RRITSFGKLN 339
           + H  + P +LL+   G   L + DFG S      RR    G L+
Sbjct: 130 VIHRDIKPENLLLGSAG--ELKIADFGWSVHAPSSRRTDLCGTLD 172

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 73.8 bits (182), Expect = 3e-14
 Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 17/120 (14%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVTKLGTLIHPI 1008
            + + L Y H + + H +I+P+N+++ S  + ++K+ D G       ++R    GT     
Sbjct: 118  LANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSRRTDLCGT----- 170

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
                 ++  PE++       + D+WS GVL Y  L G  PF   +  ET + ++ V + F
Sbjct: 171  ----LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 226

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 66.5 bits (163), Expect = 7e-12
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
             PE++       + D+WS GVL Y  L G  PF   +  ET + ++ V + F      +T
Sbjct: 175  PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVT 231

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRW 1232
            + A   +  + K  P +RP + E  E+ W
Sbjct: 232  EGARDLISRLLKHNPSQRPMLREVLEHPW 260

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 64.9 bits (159), Expect = 2e-11
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           P G +   L + S + E   A YI +L + L Y H   + H  + P +LL+   G   L 
Sbjct: 92  PLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--ELK 149

Query: 523 LTDFGLS------RRITSFGKLN 539
           + DFG S      RR    G L+
Sbjct: 150 IADFGWSVHAPSSRRTDLCGTLD 172

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 41.8 bits (99), Expect = 8e-04
 Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 9/114 (7%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE----YSHDTLHQVNTEFDNLRSLR 651
           + ++    + +GKF  V  A EK  ++ ++A K+            HQ+  E +    LR
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREK-QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67

Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
           H  I  L   +     A+ +  L++E      V   L    ++ EQ  AT I++
Sbjct: 68  HPNILRLYGYFH---DATRV-YLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  116 bits (292), Expect = 1e-28
 Identities = 39/159 (24%), Positives = 80/159 (50%), Gaps = 8/159 (5%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHR 240
           +  G+ LG+G    VY A    +G   A K++      K    + + +NE+ I  QL H 
Sbjct: 13  FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRV-QNEVKIHCQLKHP 71

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRL 299
           +++ L++ +E  +   ++ E+   GE+   L  +   ++E +  H++ Q+++G+ Y+H  
Sbjct: 72  SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
            I H  LT  +LL+      ++ + DFGL+ ++    + 
Sbjct: 132 GILHRDLTLSNLLLTRNM--NIKIADFGLATQLKMPHEK 168

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 75.7 bits (187), Expect = 7e-15
 Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 9/158 (5%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
             + +  ++ G+ YLH  G+ H ++   N+++    ++ +K+ D G   ++       + +
Sbjct: 115  RHFMHQIITGMLYLHSHGILHRDLTLSNLLLTR--NMNIKIADFGLATQLKMPHEKHYTL 172

Query: 1009 -NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
              TPN  + +PE+        ++DVWS G + Y LL G  PF   +   T   V    Y 
Sbjct: 173  CGTPN--YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE 230

Query: 1068 FEYLFKELTQEATRFLMLIFKHE-VDWITLANNIDHEF 1104
                   L+ EA   +  + +    D ++L++ +DH F
Sbjct: 231  MP---SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPF 265

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 67.9 bits (167), Expect = 2e-12
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 3/91 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            +PE+        ++DVWS G + Y LL G  PF   +   T   V    Y        L+
Sbjct: 180  SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP---SFLS 236

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
             EA   +  + +R P  R ++    ++ ++ 
Sbjct: 237  IEAKDLIHQLLRRNPADRLSLSSVLDHPFMS 267

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 60.2 bits (147), Expect = 1e-09
 Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 463 PGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
             GE+   L  +   ++E +  H++ Q+++G+ Y+H   I H  LT  +LL+      ++
Sbjct: 94  HNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNM--NI 151

Query: 522 LLTDFGLSRRITSFGKL 538
            + DFGL+ ++    + 
Sbjct: 152 KIADFGLATQLKMPHEK 168

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  114 bits (288), Expect = 4e-28
 Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 13/165 (7%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHR 240
           +D G  LG+G  G VY A E+ +    A KV+      K      L + E++I + L H 
Sbjct: 16  FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL-RREIEIQSHLRHP 74

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           N++R+++ +  +    ++ E A  GEL   L +   + E   A ++ +L   L Y H   
Sbjct: 75  NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS------RRITSFGKLN 339
           + H  + P +LL+ + G   L + DFG S      RR T  G L+
Sbjct: 135 VIHRDIKPENLLMGYKG--ELKIADFGWSVHAPSLRRRTMCGTLD 177

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 76.1 bits (188), Expect = 5e-15
 Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 22/165 (13%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGC------TQRVTKLGTLIHPI 1008
            + D L Y H R + H +I+P+N++M      ++K+ D G        +R T  GT     
Sbjct: 123  LADALHYCHERKVIHRDIKPENLLM--GYKGELKIADFGWSVHAPSLRRRTMCGT----- 175

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
                 ++  PE++  +    + D+W AGVL Y  L G  PF   S  ET + +  V  +F
Sbjct: 176  ----LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231

Query: 1069 EYLFKELTQEATRFLM-LIFKHEVDWITLANNIDHEFWHVKDLKR 1112
                  L+  +   +  L+  H    + L   ++H  W   + +R
Sbjct: 232  P---PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP-WVKANSRR 272

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 68.4 bits (168), Expect = 2e-12
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
             PE++  +    + D+W AGVL Y  L G  PF   S  ET + +  V  +F      L+
Sbjct: 180  PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP---PFLS 236

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRW 1232
              +   +  + +  P +R  ++   E+ W
Sbjct: 237  DGSKDLISKLLRYHPPQRLPLKGVMEHPW 265

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 62.2 bits (152), Expect = 2e-10
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 8/83 (9%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           P GEL   L +   + E   A ++ +L   L Y H   + H  + P +LL+ + G   L 
Sbjct: 97  PRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG--ELK 154

Query: 523 LTDFGLS------RRITSFGKLN 539
           + DFG S      RR T  G L+
Sbjct: 155 IADFGWSVHAPSLRRRTMCGTLD 177

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  115 bits (290), Expect = 4e-28
 Identities = 34/191 (17%), Positives = 74/191 (38%), Gaps = 9/191 (4%)

Query: 156 VEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 215
           +  + +  S                    Y    ++G G +  V+  +     + YA K 
Sbjct: 1   MHHHHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKY 59

Query: 216 MTGKGNQYKSL--FKNELDIMNQLCHRNL--VRLHDSYETKDSFTIISELAGGGELLHSL 271
           +  +    ++L  ++NE+  +N+L   +   +RL+D   T     ++ E  G  +L   L
Sbjct: 60  VNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWL 118

Query: 272 TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
            ++     ++   Y + +L  +  +H+  I H  L P + L+       L L DFG++ +
Sbjct: 119 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQ 175

Query: 332 ITSFGKLNPLE 342
           +         +
Sbjct: 176 MQPDTTSVVKD 186

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 69.6 bits (171), Expect = 1e-12
 Identities = 30/170 (17%), Positives = 65/170 (38%), Gaps = 22/170 (12%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH---PINTP 1011
            +L+ +  +H  G+ H +++P N ++       +KLID G   ++    T +     + T 
Sbjct: 136  MLEAVHTIHQHGIVHSDLKPANFLIVDGM---LKLIDFGIANQMQPDTTSVVKDSQVGTV 192

Query: 1012 NPEFAAPEVLAEEPIFPQT-----------DVWSAGVLAYVLLSGASPFRGQSEP-ETRQ 1059
            N  +  PE + +     +            DVWS G + Y +  G +PF+          
Sbjct: 193  N--YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 250

Query: 1060 NVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDW-ITLANNIDHEFWHVK 1108
             +    +  E+      ++    L    K +    I++   + H +  ++
Sbjct: 251  AIIDPNHEIEFP-DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 299

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 60.0 bits (146), Expect = 1e-09
 Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 3/79 (3%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
             +L   L ++     ++   Y + +L  +  +H+  I H  L P + L+       L L
Sbjct: 111 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKL 167

Query: 524 TDFGLSRRITSFGKLNPLE 542
            DFG++ ++         +
Sbjct: 168 IDFGIANQMQPDTTSVVKD 186

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 58.5 bits (142), Expect = 5e-09
 Identities = 18/104 (17%), Positives = 36/104 (34%), Gaps = 13/104 (12%)

Query: 1144 APEVLAEEPIFPQT-----------DVWSAGVLAYVLLSGASPFRGQSEP-ETRQNVNFV 1191
             PE + +     +            DVWS G + Y +  G +PF+           +   
Sbjct: 196  PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 255

Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235
             +  E+      ++    L    KR P +R ++ E   + ++  
Sbjct: 256  NHEIEFP-DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 298

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 53.9 bits (130), Expect = 1e-07
 Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 12/114 (10%)

Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAK---LFEYSHDTLHQVNTEFDNLRSLRH- 652
            Y  + +I  G  S V +       + + A K   L E  + TL     E   L  L+  
Sbjct: 29  IYSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 86

Query: 653 -ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
            ++I  L +      T   I  +VME     D+ S+L  +         +    
Sbjct: 87  SDKIIRLYDYEI---TDQYI-YMVMECGNI-DLNSWLKKKKSIDPWERKSYWKN 135

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  120 bits (303), Expect = 4e-28
 Identities = 34/180 (18%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 171 GRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKN 229
           G +  +        ++  + LG G  G V   + + +G   A K        + +  +  
Sbjct: 2   GGRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL 61

Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFT------IISELAGGGEL---LHSLTRQSYYTEY 280
           E+ IM +L H N+V   +  +            +  E   GG+L   L+         E 
Sbjct: 62  EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 121

Query: 281 DIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRRITSFGKLN 339
            I   +  + S L Y+H   I H  L P ++++     R +  + D G ++ +       
Sbjct: 122 PIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT 181

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 80.5 bits (198), Expect = 2e-15
 Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 17/140 (12%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGC-------TQRVTKLGTLIH 1006
            +   L+YLH   + H +++P+N+V+      +  K+IDLG              +GT   
Sbjct: 130  ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT--- 186

Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
                   ++ APE+L ++      D WS G LA+  ++G  PF    +P         + 
Sbjct: 187  ------LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKS 240

Query: 1067 RFEYLFKELTQEATRFLMLI 1086
                +  +    A +F  ++
Sbjct: 241  NEHIVVYDDLTGAVKFSSVL 260

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 67.4 bits (164), Expect = 2e-11
 Identities = 29/186 (15%), Positives = 60/186 (32%), Gaps = 31/186 (16%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY------ 1197
            APE+L ++      D WS G LA+  ++G  PF    +P         +           
Sbjct: 191  APELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDL 250

Query: 1198 ---------------LFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKK 1242
                           L   L  +  R+L  +      +R T  +          + ++  
Sbjct: 251  TGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310

Query: 1243 RERAVFLGNRLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQE---ELISTAFTSHL 1299
            +  +V      +  +    +       +++L +L   L +   I E   EL+  +  +  
Sbjct: 311  KLLSVMNMVSGRVHTYPVTE-------NENLQNLKSWLQQDTGIPEEEQELLQASGLALN 363

Query: 1300 VNKPSS 1305
              +P +
Sbjct: 364  SAQPLT 369

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 62.8 bits (152), Expect = 5e-10
 Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 4/81 (4%)

Query: 463 PGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
            GG+L   L+         E  I   +  + S L Y+H   I H  L P ++++     R
Sbjct: 101 EGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQR 160

Query: 520 HLL-LTDFGLSRRITSFGKLN 539
            +  + D G ++ +       
Sbjct: 161 LIHKIIDLGYAKELDQGELCT 181

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 55.1 bits (132), Expect = 1e-07
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 8/118 (6%)

Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF--EYSHDTLHQVNTEFDNLRSLRH 652
              ++    +  G F  V++   + +T   VA K    E S     +   E   ++ L H
Sbjct: 13  CGPWEMKERLGTGGFGYVLRWIHQ-DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNH 71

Query: 653 ERIASLLEAY--KPSTTASNIAVLVMEKLQGADVLSYLSSR---HEYTEQNVATIISQ 705
             + S  E          +++ +L ME  +G D+  YL+         E  + T++S 
Sbjct: 72  PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 129

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  114 bits (288), Expect = 6e-28
 Identities = 36/188 (19%), Positives = 71/188 (37%), Gaps = 17/188 (9%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
               ++    LG+G  G V  A      R YA K +     +  ++  +E+ ++  L H+
Sbjct: 4   YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI-LSEVMLLASLNHQ 62

Query: 241 NLVRLHDSYETKDSFT-------------IISELAGGGELLHSLTRQSYYTEYD-IAHYI 286
            +VR + ++  + +F              I  E    G L   +  ++   + D      
Sbjct: 63  YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122

Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVR 346
           RQ+L  L Y+H   I H  L P ++ +      ++ + DFGL++ +     +  L+    
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESR--NVKIGDFGLAKNVHRSLDILKLDSQNL 180

Query: 347 YVRQALRH 354
                   
Sbjct: 181 PGSSDNLT 188

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 63.9 bits (156), Expect = 8e-11
 Identities = 26/150 (17%), Positives = 57/150 (38%), Gaps = 19/150 (12%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG----CTQRVTKLGTLIHPINT 1010
            +L+ L Y+H +G+ H +++P N+ +    S  VK+ D G      + +  L      +  
Sbjct: 125  ILEALSYIHSQGIIHRDLKPMNIFIDE--SRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182

Query: 1011 PN---------PEFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060
             +           + A EVL     +  + D++S G++ + ++       G       + 
Sbjct: 183  SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--FSTGMERVNILKK 240

Query: 1061 VNFVRYRF-EYLFKELTQEATRFLMLIFKH 1089
            +  V   F         +   + + L+  H
Sbjct: 241  LRSVSIEFPPDFDDNKMKVEKKIIRLLIDH 270

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 60.4 bits (147), Expect = 1e-09
 Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 4/92 (4%)

Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKE 1201
            A EVL     +  + D++S G++ + ++       G       + +  V   F       
Sbjct: 198  ATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--FSTGMERVNILKKLRSVSIEFPPDFDDN 255

Query: 1202 LTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
              +   + + L+    P KRP       + WL
Sbjct: 256  KMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 58.9 bits (143), Expect = 3e-09
 Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 3/84 (3%)

Query: 463 PGGELLHSLTRQSYYTEYD-IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
             G L   +  ++   + D      RQ+L  L Y+H   I H  L P ++ +      ++
Sbjct: 98  ENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESR--NV 155

Query: 522 LLTDFGLSRRITSFGKLNPLEYGN 545
            + DFGL++ +     +  L+  N
Sbjct: 156 KIGDFGLAKNVHRSLDILKLDSQN 179

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 54.6 bits (132), Expect = 8e-08
 Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 11/121 (9%)

Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHER 654
              ++ I+ + +G F  VVKA          A K   ++ + L  + +E   L SL H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNA-LDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQY 63

Query: 655 IASLLEAYKPSTTASNIAV---------LVMEKLQGADVLSYLSSRHEYTEQN-VATIIS 704
           +     A+                    + ME  +   +   + S +   +++    +  
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123

Query: 705 Q 705
           Q
Sbjct: 124 Q 124

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  114 bits (287), Expect = 2e-27
 Identities = 33/154 (21%), Positives = 69/154 (44%), Gaps = 9/154 (5%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--FKNELDIMNQLCHRNL 242
           Y    ++G G +  V+  +     + YA K +  +    ++L  ++NE+  +N+L   + 
Sbjct: 11  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69

Query: 243 --VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             +RL+D   T     ++ E  G  +L   L ++     ++   Y + +L  +  +H+  
Sbjct: 70  KIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 128

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           I H  L P + L+       L L DFG++ ++  
Sbjct: 129 IVHSDLKPANFLIVD---GMLKLIDFGIANQMQP 159

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 69.0 bits (169), Expect = 2e-12
 Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 22/166 (13%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH---PINTP 1011
            +L+ +  +H  G+ H +++P N ++       +KLID G   ++    T +     + T 
Sbjct: 117  MLEAVHTIHQHGIVHSDLKPANFLIVDGM---LKLIDFGIANQMQPDTTSVVKDSQVGTV 173

Query: 1012 NPEFAAPEVLAEEPIFPQT-----------DVWSAGVLAYVLLSGASPFRGQSEPETR-Q 1059
            N  +  PE + +     +            DVWS G + Y +  G +PF+      ++  
Sbjct: 174  N--YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 231

Query: 1060 NVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDW-ITLANNIDHEF 1104
             +    +  E+      ++    L    K +    I++   + H +
Sbjct: 232  AIIDPNHEIEF-PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 59.7 bits (145), Expect = 2e-09
 Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
             +L   L ++     ++   Y + +L  +  +H+  I H  L P + L+       L L
Sbjct: 92  NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKL 148

Query: 524 TDFGLSRRITS 534
            DFG++ ++  
Sbjct: 149 IDFGIANQMQP 159

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 58.2 bits (141), Expect = 6e-09
 Identities = 23/162 (14%), Positives = 55/162 (33%), Gaps = 15/162 (9%)

Query: 1144 APEVLAEEPIFPQT-----------DVWSAGVLAYVLLSGASPFRGQSEPETR-QNVNFV 1191
             PE + +     +            DVWS G + Y +  G +PF+      ++   +   
Sbjct: 177  PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 236

Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGN 1251
             +  E+      ++    L    KR P +R ++ E   + ++    + + +  +      
Sbjct: 237  NHEIEF-PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGT--TE 293

Query: 1252 RLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQEELIST 1293
             +K    +   L +      +  +L++  +   S       T
Sbjct: 294  EMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGESHNSSSSKT 335

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 53.6 bits (129), Expect = 2e-07
 Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 12/114 (10%)

Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAK---LFEYSHDTLHQVNTEFDNLRSLRH- 652
            Y  + +I  G  S V +       + + A K   L E  + TL     E   L  L+  
Sbjct: 10  IYSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 67

Query: 653 -ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
            ++I  L +      T   I  +VME     D+ S+L  +         +    
Sbjct: 68  SDKIIRLYDYEI---TDQYI-YMVMECGNI-DLNSWLKKKKSIDPWERKSYWKN 116

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  112 bits (283), Expect = 3e-27
 Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 5/181 (2%)

Query: 170 RGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT--GKGNQYKSLF 227
            G            ++     LG G  G V+    +  GR YA K      +G + ++  
Sbjct: 44  PGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARK 103

Query: 228 KNELDIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI 286
             E+    ++  H   VRL  ++E      + +EL G     H     +   E  +  Y+
Sbjct: 104 LAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYL 163

Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVR 346
           R  L  L ++H   + HL + P ++ +   G     L DFGL   + + G     E D R
Sbjct: 164 RDTLLALAHLHSQGLVHLDVKPANIFLGPRG--RCKLGDFGLLVELGTAGAGEVQEGDPR 221

Query: 347 Y 347
           Y
Sbjct: 222 Y 222

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 64.6 bits (158), Expect = 4e-11
 Identities = 33/134 (24%), Positives = 51/134 (38%), Gaps = 13/134 (9%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
             L  L +LH +GL HL+++P N+ +      + KL D G    +   G          P 
Sbjct: 166  TLLALAHLHSQGLVHLDVKPANIFLG--PRGRCKLGDFGLLVELGTAGAGEVQEGD--PR 221

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS-PFRGQSEPETRQNVNFVRYRFEYLFK 1073
            + APE+L +       DV+S G+    +      P  G+   + RQ              
Sbjct: 222  YMAPELL-QGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPE-----FTA 275

Query: 1074 ELTQEATRFL--ML 1085
             L+ E    L  ML
Sbjct: 276  GLSSELRSVLVMML 289

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 61.2 bits (149), Expect = 7e-10
 Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 464 GGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           G  L        +   E  +  Y+R  L  L ++H   + HL + P ++ +   G     
Sbjct: 140 GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRG--RCK 197

Query: 523 LTDFGLSRRITSFGKLN 539
           L DFGL   + + G   
Sbjct: 198 LGDFGLLVELGTAGAGE 214

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 53.5 bits (129), Expect = 2e-07
 Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 7/91 (7%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGAS-PFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APE+L +       DV+S G+    +      P  G+   + RQ               L
Sbjct: 224  APELL-QGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPE-----FTAGL 277

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + E    L+++ +  P  R T E       L
Sbjct: 278  SSELRSVLVMMLEPDPKLRATAEALLALPVL 308

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  112 bits (283), Expect = 2e-26
 Identities = 35/166 (21%), Positives = 74/166 (44%), Gaps = 14/166 (8%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLV 243
           +   D LG G  G + +       R+ A K +     +  S    E+ ++ +   H N++
Sbjct: 26  FCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRIL---PECFSFADREVQLLRESDEHPNVI 81

Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIA 302
           R   + + +    I  EL     L   + ++ + +   +    ++Q  SGL ++H L+I 
Sbjct: 82  RYFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIV 140

Query: 303 HLGLTPGDLLVAHPGGRHLL---LTDFGLSRRIT----SFGKLNPL 341
           H  L P ++L++ P     +   ++DFGL +++     SF + + +
Sbjct: 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 76.3 bits (188), Expect = 2e-14
 Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 15/150 (10%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS---VRSVQVKLIDLG----CTQRVTKL 1001
               +     GL +LH   + H +++P N++++       ++  + D G            
Sbjct: 121  ITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180

Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQT---DVWSAGVLAYVLLS-GASPFRGQSEPET 1057
                    T    + APE+L+E+     T   D++SAG + Y ++S G+ PF    + + 
Sbjct: 181  SRRSGVPGTEG--WIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA 238

Query: 1058 RQNVNFVRYRFEYLFKELTQEATRFL--ML 1085
               +        +  K     A   +  M+
Sbjct: 239  NILLGACSLDCLHPEKHEDVIARELIEKMI 268

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 62.5 bits (152), Expect = 4e-10
 Identities = 19/86 (22%), Positives = 43/86 (50%), Gaps = 8/86 (9%)

Query: 464 GGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
              L   + ++ + +   +    ++Q  SGL ++H L+I H  L P ++L++ P     +
Sbjct: 101 AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKI 160

Query: 523 ---LTDFGLSRRIT----SFGKLNPL 541
              ++DFGL +++     SF + + +
Sbjct: 161 KAMISDFGLCKKLAVGRHSFSRRSGV 186

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 62.5 bits (152), Expect = 5e-10
 Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 15/151 (9%)

Query: 1143 QAPEVLAEEPIFPQT---DVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYL 1198
             APE+L+E+     T   D++SAG + Y ++S G+ PF    + +    +        + 
Sbjct: 193  IAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHP 252

Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEY----------MIKKRERAVF 1248
             K     A   +  +    P KRP+ +   ++ +    E            I+K      
Sbjct: 253  EKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFFQDVSDRIEKESLDGP 312

Query: 1249 LGNRLKEFSDEYHDLK-NKQFTSDSLSSLHK 1278
            +  +L+        +   +  T    + L K
Sbjct: 313  IVKQLERGGRAVVKMDWRENITVPLQTDLRK 343

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  109 bits (275), Expect = 5e-26
 Identities = 40/195 (20%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 142 RGVTGTISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYH 201
                + S  +     + E+        + + V    +           +GRG  G V+ 
Sbjct: 17  AKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHR 76

Query: 202 AVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL 261
             ++ +G   A K +     + +     EL     L    +V L+ +        I  EL
Sbjct: 77  MKDKQTGFQCAVKKV-----RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131

Query: 262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 321
             GG L   + +     E    +Y+ Q L GL+Y+H   I H  +   ++L++  G R  
Sbjct: 132 LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR-A 190

Query: 322 LLTDFGLSRRITSFG 336
            L DFG +  +   G
Sbjct: 191 ALCDFGHALCLQPDG 205

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 57.8 bits (140), Expect = 9e-09
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 5/99 (5%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN-- 1012
             L+GL+YLH R + H +++ DN V+ S    +  L D G    +   G     +      
Sbjct: 159  ALEGLEYLHTRRILHGDVKADN-VLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217

Query: 1013 --PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
                  APEV+  +P   + D+WS+  +   +L+G  P+
Sbjct: 218  GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 56.7 bits (137), Expect = 2e-08
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG L   + +     E    +Y+ Q L GL+Y+H   I H  +   ++L++  G R   
Sbjct: 133 EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR-AA 191

Query: 523 LTDFGLSRRITSFGKLNPLEYGN 545
           L DFG +  +   G    L  G+
Sbjct: 192 LCDFGHALCLQPDGLGKSLLTGD 214

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  110 bits (277), Expect = 6e-26
 Identities = 33/162 (20%), Positives = 70/162 (43%), Gaps = 9/162 (5%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--FKNELDIMNQLCHRNL 242
           Y    ++G G +  V+  +     + YA K +  +    ++L  ++NE+  +N+L   + 
Sbjct: 58  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116

Query: 243 --VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
             +RL+D   T     ++ E  G  +L   L ++     ++   Y + +L  +  +H+  
Sbjct: 117 KIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE 342
           I H  L P + L+       L L DFG++ ++         +
Sbjct: 176 IVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKD 214

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 69.8 bits (171), Expect = 2e-12
 Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 22/166 (13%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH---PINTP 1011
            +L+ +  +H  G+ H +++P N ++       +KLID G   ++    T +     +   
Sbjct: 164  MLEAVHTIHQHGIVHSDLKPANFLIVDGM---LKLIDFGIANQMQPDTTSVVKDSQVGAV 220

Query: 1012 NPEFAAPEVLAEEPIF-----------PQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQ 1059
            N  +  PE + +               P++DVWS G + Y +  G +PF+          
Sbjct: 221  N--YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 278

Query: 1060 NVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDW-ITLANNIDHEF 1104
             +    +  E+      ++    L    K +    I++   + H +
Sbjct: 279  AIIDPNHEIEFP-DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 323

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 59.8 bits (145), Expect = 3e-09
 Identities = 24/162 (14%), Positives = 55/162 (33%), Gaps = 15/162 (9%)

Query: 1144 APEVLAEEPIF-----------PQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQNVNFV 1191
             PE + +               P++DVWS G + Y +  G +PF+           +   
Sbjct: 224  PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 283

Query: 1192 RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGN 1251
             +  E+      ++    L    KR P +R ++ E   + ++    + + +  +      
Sbjct: 284  NHEIEFP-DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGT--TE 340

Query: 1252 RLKEFSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQEELIST 1293
             +K    +   L +      +  +L++  +   S       T
Sbjct: 341  EMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGESHNSSSSKT 382

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 57.1 bits (138), Expect = 2e-08
 Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 3/79 (3%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
             +L   L ++     ++   Y + +L  +  +H+  I H  L P + L+       L L
Sbjct: 139 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKL 195

Query: 524 TDFGLSRRITSFGKLNPLE 542
            DFG++ ++         +
Sbjct: 196 IDFGIANQMQPDTTSVVKD 214

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 51.4 bits (123), Expect = 1e-06
 Identities = 30/142 (21%), Positives = 48/142 (33%), Gaps = 15/142 (10%)

Query: 572 AQDPPPLNYSVEDSPIEWSTEPPTDK---YQFISEIHRGKFSVVVKAAEKANTENLVAAK 628
             D P L    +D     + E  + K   Y  + +I  G  S V +       + + A K
Sbjct: 29  HMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQV--LNEKKQIYAIK 86

Query: 629 ---LFEYSHDTLHQVNTEFDNLRSLRH--ERIASLLEAYKPSTTASNIAVLVMEKLQGAD 683
              L E  + TL     E   L  L+   ++I  L +      T   I  +VME     D
Sbjct: 87  YVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI---TDQYI-YMVMECGNI-D 141

Query: 684 VLSYLSSRHEYTEQNVATIISQ 705
           + S+L  +         +    
Sbjct: 142 LNSWLKKKKSIDPWERKSYWKN 163

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  110 bits (275), Expect = 7e-26
 Identities = 29/206 (14%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 151 SVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERS---- 206
            ++  V    N + ++      + KT  +  +        LG G    VY A +      
Sbjct: 33  GLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDA 92

Query: 207 -SGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGG 265
            + + +  KV          +    ++ +        ++ + ++  ++   ++ EL   G
Sbjct: 93  KNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYG 152

Query: 266 ELLHSLTRQSYYT-----EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR- 319
            LL+++            +  +  +  ++L  ++ +H   I H  + P + ++ +     
Sbjct: 153 TLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQ 212

Query: 320 --------HLLLTDFGLSRRITSFGK 337
                    L L D G S  +  F K
Sbjct: 213 DDEDDLSAGLALIDLGQSIDMKLFPK 238

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 75.8 bits (186), Expect = 2e-14
 Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 14/133 (10%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASV---------RSVQVKLIDLGCTQRVTKLG--- 1002
            +L  ++ +H   + H +I+PDN ++ +           S  + LIDLG +  +       
Sbjct: 181  MLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT 240

Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
                   T    F   E+L+ +P   Q D +      Y +L G          E +    
Sbjct: 241  IFTAKCETS--GFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGL 298

Query: 1063 FVRYRFEYLFKEL 1075
            F R     ++ E 
Sbjct: 299  FRRLPHLDMWNEF 311

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 53.8 bits (129), Expect = 2e-07
 Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 14/89 (15%)

Query: 463 PGGELLHSLTRQSYYT-----EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG 517
             G LL+++            +  +  +  ++L  ++ +H   I H  + P + ++ +  
Sbjct: 150 SYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGF 209

Query: 518 GR---------HLLLTDFGLSRRITSFGK 537
                       L L D G S  +  F K
Sbjct: 210 LEQDDEDDLSAGLALIDLGQSIDMKLFPK 238

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 48.8 bits (116), Expect = 8e-06
 Identities = 12/59 (20%), Positives = 20/59 (33%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
              E+L+ +P   Q D +      Y +L G          E +    F R     ++ E 
Sbjct: 253  CVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDMWNEF 311

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 46.5 bits (110), Expect = 4e-05
 Identities = 18/148 (12%), Positives = 42/148 (28%), Gaps = 28/148 (18%)

Query: 571 LAQDPPPL----NYSVEDSPI-----EWSTEPPTDKYQFISEIHRGKFSVVVKAAEKAN- 620
           L+    P+    N       +     +   +  +        +  G F+ V +A +    
Sbjct: 31  LSGLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLN 90

Query: 621 ---TENLVAAK------LFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI 671
               +     K       +E+     +      + L+            A+       N 
Sbjct: 91  DAKNKQKFVLKVQKPANPWEF-----YIGTQLMERLKPSMQHMFMKFYSAHL----FQNG 141

Query: 672 AVLVMEKLQGADVLSYLSSRHEYTEQNV 699
           +VLV E      +L+ ++      E+ +
Sbjct: 142 SVLVGELYSYGTLLNAINLYKNTPEKVM 169

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  111 bits (279), Expect = 8e-26
 Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 24/183 (13%)

Query: 169 ARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFK 228
           +R   +    + + +       LG G +G V        GR  A K M         +  
Sbjct: 1   SRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRML-IDFC--DIAL 56

Query: 229 NELDIMNQLC-HRNLVRLHDSYETKDSFTIISELAGGGELL-------HSLTRQSYYTEY 280
            E+ ++ +   H N++R + S  T     I  EL     L         S        EY
Sbjct: 57  MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEY 115

Query: 281 DIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH-----------LLLTDFGLS 329
           +    +RQ+ SG+ ++H L I H  L P ++LV+                 +L++DFGL 
Sbjct: 116 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175

Query: 330 RRI 332
           +++
Sbjct: 176 KKL 178

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 63.6 bits (155), Expect = 2e-10
 Identities = 30/150 (20%), Positives = 63/150 (42%), Gaps = 26/150 (17%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMAS-----------VRSVQVKLIDLG-CTQRVTKLG 1002
            +  G+ +LH   + H +++P N+++++             ++++ + D G C +  +   
Sbjct: 124  IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS 183

Query: 1003 TLIHPINTP--NPEFAAPEVLAEEPIFPQT-------DVWSAGVLAYVLLS-GASPFRGQ 1052
            +    +N P     + APE+L E              D++S G + Y +LS G  PF  +
Sbjct: 184  SFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243

Query: 1053 SEPET---RQNVNFVRYRFEYLFKELTQEA 1079
               E+   R   +    +  +  + L  EA
Sbjct: 244  YSRESNIIRGIFSLDEMKCLHD-RSLIAEA 272

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 57.1 bits (138), Expect = 2e-08
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 18/87 (20%)

Query: 464 GGELL-------HSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP 516
              L         S        EY+    +RQ+ SG+ ++H L I H  L P ++LV+  
Sbjct: 92  NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS 151

Query: 517 GGRH-----------LLLTDFGLSRRI 532
                          +L++DFGL +++
Sbjct: 152 SRFTADQQTGAENLRILISDFGLCKKL 178

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 53.6 bits (129), Expect = 3e-07
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 16/108 (14%)

Query: 1143 QAPEVLAEEPIFPQT-------DVWSAGVLAYVLLS-GASPFRGQSEPET---RQNVNFV 1191
            +APE+L E              D++S G + Y +LS G  PF  +   E+   R   +  
Sbjct: 199  RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLD 258

Query: 1192 RYRFEYLFKELTQEATRFL--MLIFKRAPGKRPTVEECHENRWLVPSE 1237
              +  +  + L  EAT  +  M+     P KRPT  +   +    P  
Sbjct: 259  EMKCLHD-RSLIAEATDLISQMIDHD--PLKRPTAMKVLRHPLFWPKS 303

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  109 bits (274), Expect = 9e-26
 Identities = 34/156 (21%), Positives = 68/156 (43%), Gaps = 6/156 (3%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHR 240
           + Y    ++G G  G          GR Y  K +  +   ++ +   + E+ ++  + H 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHR 298
           N+V+  +S+E   S  I+ +   GG+L   +  Q    + E  I  +  Q+   L ++H 
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             I H  +   ++ +   G   + L DFG++R + S
Sbjct: 144 RKILHRDIKSQNIFLTKDG--TVQLGDFGIARVLNS 177

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 62.4 bits (152), Expect = 3e-10
 Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 19/116 (16%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG--------CTQRVTKLGTLIH 1006
            +   L+++H R + H +I+  N+ +   +   V+L D G               +GT   
Sbjct: 134  ICLALKHVHDRKILHRDIKSQNIFLT--KDGTVQLGDFGIARVLNSTVELARACIGT--- 188

Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
                  P + +PE+   +P   ++D+W+ G + Y L +    F   S       + 
Sbjct: 189  ------PYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 57.8 bits (140), Expect = 9e-09
 Identities = 24/134 (17%), Positives = 51/134 (38%), Gaps = 4/134 (2%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            +PE+   +P   ++D+W+ G + Y L +    F   S       +  +   F  +    +
Sbjct: 193  SPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI--ISGSFPPVSLHYS 250

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWLVP--SEYMIKKRERAVFLGNRLKEFSDEYH 1261
             +    +  +FKR P  RP+V    E  ++     +++  +     F      +F  +  
Sbjct: 251  YDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPI 310

Query: 1262 DLKNKQFTSDSLSS 1275
              K      +S+S 
Sbjct: 311  PAKRPASGQNSISV 324

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 51.2 bits (123), Expect = 1e-06
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 4/74 (5%)

Query: 463 PGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
            GG+L   +  Q    + E  I  +  Q+   L ++H   I H  +   ++ +   G   
Sbjct: 106 EGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG--T 163

Query: 521 LLLTDFGLSRRITS 534
           + L DFG++R + S
Sbjct: 164 VQLGDFGIARVLNS 177

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 47.8 bits (114), Expect = 1e-05
 Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 10/131 (7%)

Query: 580 YSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK---LFEYSHDT 636
            S  D   E       +KY  + +I  G F   +              K   +   S   
Sbjct: 8   SSGVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTE-DGRQYVIKEINISRMSSKE 66

Query: 637 LHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE--Y 694
             +   E   L +++H  I    E+++     +    +VM+  +G D+   ++++    +
Sbjct: 67  REESRREVAVLANMKHPNIVQYRESFE----ENGSLYIVMDYCEGGDLFKRINAQKGVLF 122

Query: 695 TEQNVATIISQ 705
            E  +     Q
Sbjct: 123 QEDQILDWFVQ 133

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  106 bits (266), Expect = 6e-25
 Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 4/163 (2%)

Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNEL 231
           R V  +  P     D   ++G G TGIV  A E+ SGR  A K+M  +  Q + L  NE+
Sbjct: 35  RMVVDQGDP-RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEV 93

Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
            IM    H N+V ++ SY   +   ++ E   GG L   +  Q    E  IA     +L 
Sbjct: 94  VIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT-DIVSQVRLNEEQIATVCEAVLQ 152

Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            L Y+H   + H  +    +L+   G   + L+DFG   +I+ 
Sbjct: 153 ALAYLHAQGVIHRDIKSDSILLTLDG--RVKLSDFGFCAQISK 193

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 58.9 bits (143), Expect = 3e-09
 Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 19/109 (17%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
            A    +VL  L YLH +G+ H +I+ D++++      +VKL D G C Q       R + 
Sbjct: 144  ATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL--DGRVKLSDFGFCAQISKDVPKRKSL 201

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            +GT         P + APEV++      + D+WS G++   ++ G  P+
Sbjct: 202  VGT---------PYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY 241

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 45.1 bits (107), Expect = 1e-04
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GG L   +  Q    E  IA     +L  L Y+H   + H  +    +L+   G   + L
Sbjct: 126 GGALT-DIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG--RVKL 182

Query: 524 TDFGLSRRITS 534
           +DFG   +I+ 
Sbjct: 183 SDFGFCAQISK 193

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  105 bits (264), Expect = 1e-24
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 9/159 (5%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCH 239
             +    ++GRG    VY A     G   A K +        + ++    E+D++ QL H
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDY 295
            N+++ + S+   +   I+ ELA  G+L   +           E  +  Y  QL S L++
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151

Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           MH   + H  + P ++ +   G   + L D GL R  +S
Sbjct: 152 MHSRRVMHRDIKPANVFITATG--VVKLGDLGLGRFFSS 188

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 56.2 bits (136), Expect = 2e-08
 Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 19/107 (17%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG--------CTQRVTKLGTLIH 1006
            +   L+++H R + H +I+P NV +    +  VKL DLG         T   + +GT   
Sbjct: 145  LCSALEHMHSRRVMHRDIKPANVFIT--ATGVVKLGDLGLGRFFSSKTTAAHSLVGT--- 199

Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
                  P + +PE + E     ++D+WS G L Y + +  SPF G  
Sbjct: 200  ------PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK 240

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 50.4 bits (121), Expect = 2e-06
 Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 1/94 (1%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE-L 1202
            +PE + E     ++D+WS G L Y + +  SPF G             +  +  L  +  
Sbjct: 204  SPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHY 263

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPS 1236
            ++E  + + +     P KRP V   ++    + +
Sbjct: 264  SEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 48.8 bits (117), Expect = 5e-06
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 6/76 (7%)

Query: 463 PGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
             G+L   +           E  +  Y  QL S L++MH   + H  + P ++ +   G 
Sbjct: 115 DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG- 173

Query: 519 RHLLLTDFGLSRRITS 534
             + L D GL R  +S
Sbjct: 174 -VVKLGDLGLGRFFSS 188

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 44.6 bits (106), Expect = 1e-04
 Identities = 27/143 (18%), Positives = 46/143 (32%), Gaps = 14/143 (9%)

Query: 572 AQDPPPLNYSVEDSPIEWSTEPPT-DKYQFISEIHRGKFSVVVKAAEKANTENLVAAK-- 628
               PP+        +       T   ++   +I RG+FS V +AA        VA K  
Sbjct: 7   GMQGPPVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACL-LDGVPVALKKV 65

Query: 629 -LFEY-SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLS 686
            +F+            E D L+ L H  +     ++       N   +V+E     D+  
Sbjct: 66  QIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI----EDNELNIVLELADAGDLSR 121

Query: 687 YLSSRHEY----TEQNVATIISQ 705
            +    +      E+ V     Q
Sbjct: 122 MIKHFKKQKRLIPERTVWKYFVQ 144

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  103 bits (260), Expect = 2e-24
 Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 3/164 (1%)

Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++   +        K E+ I   L 
Sbjct: 4   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE 342
           + I H  + P +LL+      +L ++DFGL+       +   L 
Sbjct: 124 IGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLN 165

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 63.8 bits (156), Expect = 7e-11
 Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 16/166 (9%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--NP 1013
            + G+ YLH  G+ H +I+P+N+++       +K+ D G    V +       +N      
Sbjct: 115  MAGVVYLHGIGITHRDIKPENLLLDE--RDNLKISDFGLA-TVFRYNNRERLLNKMCGTL 171

Query: 1014 EFAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSE--PETRQNVNFVRYRFEY 1070
             + APE+L          DVWS G++   +L+G  P+   S+   E         Y   +
Sbjct: 172  PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231

Query: 1071 LFKELTQEATRFLMLIFKHEVD---WITLANNIDHEFWHVKDLKRE 1113
              K++       L  I     +    IT+ +      W+ K LK+ 
Sbjct: 232  --KKIDSAPLALLHKIL--VENPSARITIPDIKKDR-WYNKPLKKG 272

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 56.4 bits (137), Expect = 1e-08
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 5/92 (5%)

Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSE--PETRQNVNFVRYRFEYLFK 1200
            APE+L          DVWS G++   +L+G  P+   S+   E         Y   +  K
Sbjct: 175  APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW--K 232

Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
            ++       L  I    P  R T+ +  ++RW
Sbjct: 233  KIDSAPLALLHKILVENPSARITIPDIKKDRW 264

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 51.8 bits (125), Expect = 5e-07
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL   +       E D   +  QL++G+ Y+H + I H  + P +LL+      +L 
Sbjct: 88  SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLK 145

Query: 523 LTDFGLSRRITSFGKLNPLE 542
           ++DFGL+       +   L 
Sbjct: 146 ISDFGLATVFRYNNRERLLN 165

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  105 bits (263), Expect = 3e-24
 Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 1/154 (0%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVR 244
           YDF  ++G G  G+     ++ +    A K +  +G       + E+     L H N+VR
Sbjct: 22  YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIE-RGAAIDENVQREIINHRSLRHPNIVR 80

Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
             +   T     II E A GGEL   +     ++E +   + +QLLSG+ Y H + I H 
Sbjct: 81  FKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHR 140

Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
            L   + L+       L + DFG S+      + 
Sbjct: 141 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 174

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 76.2 bits (188), Expect = 1e-14
 Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 18/168 (10%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH-PINTPNPE 1014
            L G+ Y H   +CH +++ +N ++    + ++K+ D G + + + L +     + TP   
Sbjct: 126  LSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYS-KSSVLHSQPKSTVGTPA-- 182

Query: 1015 FAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPE----TRQNVNFVRYRF- 1068
            + APEVL  +       DVWS GV  YV+L GA PF    EP     T Q +  V+Y   
Sbjct: 183  YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP 242

Query: 1069 EYLFKELTQEATRFLMLIFKHEVD---WITLANNIDHEFWHVKDLKRE 1113
            + +   ++ E    +  IF    D    I++     H  W +K+L  +
Sbjct: 243  DDIR--ISPECCHLISRIF--VADPATRISIPEIKTHS-WFLKNLPAD 285

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 63.9 bits (156), Expect = 1e-10
 Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 8/95 (8%)

Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPE----TRQNVNFVRYRF-EY 1197
            APEVL  +       DVWS GV  YV+L GA PF    EP     T Q +  V+Y   + 
Sbjct: 185  APEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDD 244

Query: 1198 LFKELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
            +   ++ E    +  IF   P  R ++ E   + W
Sbjct: 245  IR--ISPECCHLISRIFVADPATRISIPEIKTHSW 277

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 53.1 bits (128), Expect = 3e-07
 Identities = 21/76 (27%), Positives = 34/76 (44%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL   +     ++E +   + +QLLSG+ Y H + I H  L   + L+       L 
Sbjct: 99  SGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLK 158

Query: 523 LTDFGLSRRITSFGKL 538
           + DFG S+      + 
Sbjct: 159 ICDFGYSKSSVLHSQP 174

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 45.0 bits (107), Expect = 1e-04
 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 5/116 (4%)

Query: 581 SVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQV 640
            V   P++      +D+Y F+ +I  G F V  +      T+ LVA K  E        V
Sbjct: 5   PVTTGPLDMPIMHDSDRYDFVKDIGSGNFGVA-RLMRDKLTKELVAVKYIERGAAIDENV 63

Query: 641 NTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTE 696
             E  N RSLRH  I    E      T +++A ++ME   G ++   + +   ++E
Sbjct: 64  QREIINHRSLRHPNIVRFKEVIL---TPTHLA-IIMEYASGGELYERICNAGRFSE 115

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  104 bits (261), Expect = 3e-24
 Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 4/157 (2%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNL 242
           Y     +G+G    V  A    +GR  A K++  T            E+ IM  L H N+
Sbjct: 17  YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
           V+L +  ET+ +  +I E A GGE+   L       E +     RQ++S + Y H+  I 
Sbjct: 77  VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 136

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
           H  L   +LL+      ++ + DFG S   T  GKL+
Sbjct: 137 HRDLKAENLLLDADM--NIKIADFGFSNEFTVGGKLD 171

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 78.5 bits (194), Expect = 2e-15
 Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            ++  +QY H + + H +++ +N+++ +   + +K+ D G +   T  G L      P   
Sbjct: 123  IVSAVQYCHQKRIVHRDLKAENLLLDA--DMNIKIADFGFSNEFTVGGKLDAFCGAPP-- 178

Query: 1015 FAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLF 1072
            +AAPE+   +    P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR   Y+ 
Sbjct: 179  YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 238

Query: 1073 KELTQEATRFLML----------IFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSA 1122
             +      RFL+L          I K    WI   +  D     V+     ++   R+  
Sbjct: 239  TDCENLLKRFLVLNPIKRGTLEQIMKDR--WINAGHEEDELKPFVEPELDISDQK-RIDI 295

Query: 1123 KNVIGWSEKGIPSALFKTK 1141
               +G+S++ I  +L K K
Sbjct: 296  MVGMGYSQEEIQESLSKMK 314

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 69.3 bits (170), Expect = 2e-12
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APE+   +    P+ DVWS GV+ Y L+SG+ PF GQ+  E R+ V   +YR  +    +
Sbjct: 181  APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF---YM 237

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + +    L       P KR T+E+  ++RW+
Sbjct: 238  STDCENLLKRFLVLNPIKRGTLEQIMKDRWI 268

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 55.8 bits (135), Expect = 4e-08
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 2/77 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGE+   L       E +     RQ++S + Y H+  I H  L   +LL+      ++ 
Sbjct: 97  SGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM--NIK 154

Query: 523 LTDFGLSRRITSFGKLN 539
           + DFG S   T  GKL+
Sbjct: 155 IADFGFSNEFTVGGKLD 171

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  103 bits (259), Expect = 3e-24
 Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 4/163 (2%)

Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNEL 231
           R + +   P    Y   +++G+G +G VY A++ ++G+  A + M  +    K L  NE+
Sbjct: 10  RSIVSVGDP-KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68

Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
            +M +  + N+V   DSY   D   ++ E   GG L   +  ++   E  IA   R+ L 
Sbjct: 69  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT-DVVTETCMDEGQIAAVCRECLQ 127

Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            L+++H   + H  +   ++L+   G   + LTDFG   +IT 
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITP 168

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 59.2 bits (144), Expect = 2e-09
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 19/109 (17%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
            A      L  L++LH   + H +I+ DN+++       VKL D G C Q       R T 
Sbjct: 119  AAVCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQSKRSTM 176

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            +GT         P + APEV+  +   P+ D+WS G++A  ++ G  P+
Sbjct: 177  VGT---------PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 43.4 bits (103), Expect = 3e-04
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GG L   +  ++   E  IA   R+ L  L+++H   + H  +   ++L+   G   + L
Sbjct: 101 GGSLT-DVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKL 157

Query: 524 TDFGLSRRITS 534
           TDFG   +IT 
Sbjct: 158 TDFGFCAQITP 168

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 42.3 bits (100), Expect = 7e-04
 Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 15/132 (11%)

Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQ-VNTEFDNLR 648
           S   P  KY    +I +G    V  A + A T   VA +          + +  E   +R
Sbjct: 14  SVGDPKKKYTRFEKIGQGASGTVYTAMDVA-TGQEVAIRQMNLQQQPKKELIINEILVMR 72

Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQG---ADVLSYLSSRHEYTEQNVATIISQ 705
             ++  I + L++Y           +VME L G    DV+    +     E  +A +  +
Sbjct: 73  ENKNPNIVNYLDSYLVGDE----LWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRE 124

Query: 706 AWE--HYLKKNR 715
             +   +L  N+
Sbjct: 125 CLQALEFLHSNQ 136

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  101 bits (253), Expect = 2e-23
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 5/168 (2%)

Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLF---KNEL 231
           K   +     Y  GD LG G  G V     + +G   A K++  +  +   +    K E+
Sbjct: 3   KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREI 62

Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
             +    H ++++L+    T   F ++ E   GGEL   + +     E +     +Q+LS
Sbjct: 63  QNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS 122

Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
            +DY HR  + H  L P ++L+      +  + DFGLS  ++    L 
Sbjct: 123 AVDYCHRHMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLR 168

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 69.5 bits (171), Expect = 8e-13
 Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 18/164 (10%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            +L  + Y H   + H +++P+NV++ +   +  K+ D G +  ++    L     +PN  
Sbjct: 120  ILSAVDYCHRHMVVHRDLKPENVLLDA--HMNAKIADFGLSNMMSDGEFLRTSCGSPN-- 175

Query: 1015 FAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
            +AAPEV++      P+ D+WS GV+ Y LL G  PF  +  P   + +    +       
Sbjct: 176  YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE--- 232

Query: 1074 ELTQEATRFL--MLIFKHEVD---WITLANNIDHEFWHVKDLKR 1112
             L +     L  ML    +VD     T+ +  +HE W  +DL  
Sbjct: 233  YLNRSVATLLMHML----QVDPLKRATIKDIREHE-WFKQDLPS 271

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 61.8 bits (151), Expect = 3e-10
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APEV++      P+ D+WS GV+ Y LL G  PF  +  P   + +    +        L
Sbjct: 178  APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE---YL 234

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
             +     LM + +  P KR T+++  E+ W 
Sbjct: 235  NRSVATLLMHMLQVDPLKRATIKDIREHEWF 265

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 53.4 bits (129), Expect = 1e-07
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL   + +     E +     +Q+LS +DY HR  + H  L P ++L+      +  
Sbjct: 94  SGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM--NAK 151

Query: 523 LTDFGLSRRITSFGKLN 539
           + DFGLS  ++    L 
Sbjct: 152 IADFGLSNMMSDGEFLR 168

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  100 bits (252), Expect = 2e-23
 Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 24/173 (13%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVR 244
           +   + +G G  G V+ A  R  G+ Y  K +           + E+  + +L H N+V 
Sbjct: 13  FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV----KYNNEKAEREVKALAKLDHVNIVH 68

Query: 245 LHDSYETKDSFT----------------IISELAGGGELLHSLTRQ--SYYTEYDIAHYI 286
            +  ++  D                   I  E    G L   + ++      +       
Sbjct: 69  YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128

Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
            Q+  G+DY+H   + +  L P ++ +       + + DFGL   + + GK  
Sbjct: 129 EQITKGVDYIHSKKLINRDLKPSNIFLVDTK--QVKIGDFGLVTSLKNDGKRT 179

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 60.0 bits (146), Expect = 1e-09
 Identities = 19/95 (20%), Positives = 43/95 (45%), Gaps = 4/95 (4%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            +  G+ Y+H + L + +++P N+ +    + QVK+ D G    +   G       T    
Sbjct: 131  ITKGVDYIHSKKLINRDLKPSNIFLV--DTKQVKIGDFGLVTSLKNDGKRTRSKGTLR-- 186

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            + +PE ++ +    + D+++ G++   LL      
Sbjct: 187  YMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA 221

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 54.6 bits (132), Expect = 7e-08
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 4/79 (5%)

Query: 463 PGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
             G L   + ++      +        Q+  G+DY+H   + +  L P ++ +       
Sbjct: 103 DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK--Q 160

Query: 521 LLLTDFGLSRRITSFGKLN 539
           + + DFGL   + + GK  
Sbjct: 161 VKIGDFGLVTSLKNDGKRT 179

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 45.7 bits (109), Expect = 5e-05
 Identities = 16/103 (15%), Positives = 35/103 (33%), Gaps = 7/103 (6%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            +PE ++ +    + D+++ G++   LL            ET +    +R     +     
Sbjct: 189  SPEQISSQDYGKEVDLYALGLILAELLHVCDTA-----FETSKFFTDLRDG--IISDIFD 241

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERA 1246
            ++    L  +  + P  RP   E      +        +R  A
Sbjct: 242  KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNERHTA 284

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  101 bits (253), Expect = 3e-23
 Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 3/164 (1%)

Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++   +        K E+ I   L 
Sbjct: 4   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE 342
           + I H  + P +LL+      +L ++DFGL+       +   L 
Sbjct: 124 IGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLN 165

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 62.7 bits (153), Expect = 2e-10
 Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 16/166 (9%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--NP 1013
            + G+ YLH  G+ H +I+P+N+++       +K+ D G    V +       +N      
Sbjct: 115  MAGVVYLHGIGITHRDIKPENLLLDE--RDNLKISDFGLA-TVFRYNNRERLLNKMCGTL 171

Query: 1014 EFAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSE--PETRQNVNFVRYRFEY 1070
             + APE+L          DVWS G++   +L+G  P+   S+   E         Y   +
Sbjct: 172  PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 231

Query: 1071 LFKELTQEATRFLMLIFKHEVD---WITLANNIDHEFWHVKDLKRE 1113
              K++       L  I     +    IT+ +      W+ K LK+ 
Sbjct: 232  --KKIDSAPLALLHKIL--VENPSARITIPDIKKDR-WYNKPLKKG 272

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 56.9 bits (138), Expect = 2e-08
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 5/92 (5%)

Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSE--PETRQNVNFVRYRFEYLFK 1200
            APE+L          DVWS G++   +L+G  P+   S+   E         Y   +  K
Sbjct: 175  APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW--K 232

Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
            ++       L  I    P  R T+ +  ++RW
Sbjct: 233  KIDSAPLALLHKILVENPSARITIPDIKKDRW 264

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 50.8 bits (122), Expect = 1e-06
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL   +       E D   +  QL++G+ Y+H + I H  + P +LL+      +L 
Sbjct: 88  SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLK 145

Query: 523 LTDFGLSRRITSFGKLNPLE 542
           ++DFGL+       +   L 
Sbjct: 146 ISDFGLATVFRYNNRERLLN 165

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  100 bits (252), Expect = 4e-23
 Identities = 34/154 (22%), Positives = 57/154 (37%), Gaps = 10/154 (6%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVR 244
           Y F  +LG G    V        G  YA K +     Q +   + E D+     H N++R
Sbjct: 31  YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILR 90

Query: 245 LHDSYETKDSFT----IISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYM 296
           L      +        ++      G L + +     + ++ TE  I   +  +  GL+ +
Sbjct: 91  LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150

Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           H    AH  L P ++L+   G    +L D G   
Sbjct: 151 HAKGYAHRDLKPTNILLGDEG--QPVLMDLGSMN 182

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 59.3 bits (144), Expect = 3e-09
 Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 17/114 (14%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG----------CTQRVTKLGTL 1004
            +  GL+ +H +G  H +++P N+++      Q  L+DLG           +++   L   
Sbjct: 143  ICRGLEAIHAKGYAHRDLKPTNILLGD--EGQPVLMDLGSMNQACIHVEGSRQALTLQDW 200

Query: 1005 IHPINTPNPEFAAPEVLAEE---PIFPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
                 T +  + APE+ + +    I  +TDVWS G + Y ++ G  P+    + 
Sbjct: 201  AAQRCTIS--YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK 252

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 53.1 bits (128), Expect = 3e-07
 Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 4/113 (3%)

Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIA 656
            Y FI ++  G FS V       +       ++  +      +   E D  R   H  I 
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89

Query: 657 SLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE----YTEQNVATIISQ 705
            L+        A + A L++   +   + + +    +     TE  +  ++  
Sbjct: 90  RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 50.4 bits (121), Expect = 2e-06
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 463 PGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
             G L + + R     ++ TE  I   +  +  GL+ +H    AH  L P ++L+   G 
Sbjct: 113 KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG- 171

Query: 519 RHLLLTDFGLSR 530
              +L D G   
Sbjct: 172 -QPVLMDLGSMN 182

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 48.9 bits (117), Expect = 5e-06
 Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 5/93 (5%)

Query: 1144 APEVLAEE---PIFPQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQNVNFVRYRFEYLF 1199
            APE+ + +    I  +TDVWS G + Y ++ G  P+    +  ++       +       
Sbjct: 211  APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQ-S 269

Query: 1200 KELTQEATRFLMLIFKRAPGKRPTVEECHENRW 1232
               +    + L  +    P +RP +        
Sbjct: 270  PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  101 bits (253), Expect = 4e-23
 Identities = 34/177 (19%), Positives = 70/177 (39%), Gaps = 11/177 (6%)

Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--------TGKGNQY 223
             +       +  Y     LG G  G V+ AV++   +    K +            +  
Sbjct: 13  EGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPK 72

Query: 224 KSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAG-GGELLHSLTRQSYYTEYDI 282
                 E+ I++++ H N++++ D +E +  F ++ E  G G +L   + R     E   
Sbjct: 73  LGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLA 132

Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
           ++  RQL+S + Y+    I H  +   ++++A      + L DFG +  +       
Sbjct: 133 SYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDF--TIKLIDFGSAAYLERGKLFY 187

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 68.6 bits (168), Expect = 3e-12
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 9/98 (9%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--N 1012
            ++  + YL  + + H +I+ +N+V+A      +KLID G +    + G L +   T    
Sbjct: 139  LVSAVGYLRLKDIIHRDIKDENIVIAE--DFTIKLIDFG-SAAYLERGKLFY---TFCGT 192

Query: 1013 PEFAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPF 1049
             E+ APEVL   P   P+ ++WS GV  Y L+   +PF
Sbjct: 193  IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 57.4 bits (139), Expect = 1e-08
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 10/91 (10%)

Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APEVL   P   P+ ++WS GV  Y L+   +PF         +          Y    +
Sbjct: 197  APEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF------CELEETVEAAIHPPY---LV 247

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            ++E    +  + +  P +R T+E+   + W+
Sbjct: 248  SKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 54.7 bits (132), Expect = 8e-08
 Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
           G G +L   + R     E   ++  RQL+S + Y+    I H  +   ++++A      +
Sbjct: 112 GSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDF--TI 169

Query: 522 LLTDFGLSRRITSFGKLN 539
            L DFG +  +       
Sbjct: 170 KLIDFGSAAYLERGKLFY 187

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 98.9 bits (247), Expect = 2e-22
 Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 11/166 (6%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHR 240
           Y  GD LG G  G V   ++  +    A K++      +    ++  K E+ ++ +L H+
Sbjct: 7   YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66

Query: 241 NLVRLHD--SYETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
           N+++L D    E K    ++ E    G  E+L S+  + +        Y  QL+ GL+Y+
Sbjct: 67  NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRF-PVCQAHGYFCQLIDGLEYL 125

Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE 342
           H   I H  + PG+LL+   G   L ++  G++  +  F   +   
Sbjct: 126 HSQGIVHKDIKPGNLLLTTGG--TLKISALGVAEALHPFAADDTCR 169

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 70.4 bits (173), Expect = 6e-13
 Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 22/167 (13%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---CTQRVTKLGTLIHPINTPN 1012
            +DGL+YLH +G+ H +I+P N+++ +     +K+  LG            T      +P 
Sbjct: 119  IDGLEYLHSQGIVHKDIKPGNLLLTTGG--TLKISALGVAEALHPFAADDTCRTSQGSPA 176

Query: 1013 PEFAAPEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
              F  PE+      F   + D+WSAGV  Y + +G  PF G +  +  +N+    Y    
Sbjct: 177  --FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP- 233

Query: 1071 LFKELTQEATRFL--MLIFKHEVD---WITLANNIDHEFWHVKDLKR 1112
               +     +  L  ML    E +     ++     H  W  K    
Sbjct: 234  --GDCGPPLSDLLKGML----EYEPAKRFSIRQIRQHS-WFRKKHPP 273

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 61.1 bits (149), Expect = 5e-10
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 1143 QAPEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1200
            Q PE+      F   + D+WSAGV  Y + +G  PF G +  +  +N+    Y       
Sbjct: 178  QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP---G 234

Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            +     +  L  + +  P KR ++ +  ++ W 
Sbjct: 235  DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 50.0 bits (120), Expect = 2e-06
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 461 RGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
                E+L S+  + +        Y  QL+ GL+Y+H   I H  + PG+LL+   G   
Sbjct: 91  VCGMQEMLDSVPEKRF-PVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGG--T 147

Query: 521 LLLTDFGLSRRITSFGKLNPLE 542
           L ++  G++  +  F   +   
Sbjct: 148 LKISALGVAEALHPFAADDTCR 169

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 96.6 bits (241), Expect = 5e-22
 Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 15/165 (9%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHR 240
           + Y+    +G G  G       +S G+    K +         K +  +E++++ +L H 
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 241 NLVRLHDSY--ETKDSFTIISELAGGGELLHSLTRQS----YYTEYDIAHYIRQLLSGLD 294
           N+VR +D     T  +  I+ E   GG+L   +T+ +    Y  E  +   + QL   L 
Sbjct: 66  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125

Query: 295 YMHRL-----SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             HR      ++ H  L P ++ +      ++ L DFGL+R +  
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLARILNH 168

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 63.1 bits (154), Expect = 1e-10
 Identities = 30/127 (23%), Positives = 49/127 (38%), Gaps = 24/127 (18%)

Query: 955  VLDGLQYLHWRGLC-----HLNIEPDNVVMASVRSVQVKLIDLG--------CTQRVTKL 1001
            +   L+  H R        H +++P NV +       VKL D G         +   T +
Sbjct: 120  LTLALKECHRRSDGGHTVLHRDLKPANVFLDG--KQNVKLGDFGLARILNHDTSFAKTFV 177

Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            GT         P + +PE +       ++D+WS G L Y L +   PF   S+ E    +
Sbjct: 178  GT---------PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228

Query: 1062 NFVRYRF 1068
               ++R 
Sbjct: 229  REGKFRR 235

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 60.4 bits (147), Expect = 8e-10
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 2/92 (2%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            +PE +       ++D+WS G L Y L +   PF   S+ E    +     +F  +    +
Sbjct: 184  SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI--REGKFRRIPYRYS 241

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235
             E    +  +       RP+VEE  EN  ++ 
Sbjct: 242  DELNEIITRMLNLKDYHRPSVEEILENPLILE 273

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 48.8 bits (117), Expect = 5e-06
 Identities = 21/117 (17%), Positives = 45/117 (38%), Gaps = 10/117 (8%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAK---LFEYSHDTLHQVNTEFDNLRSLRH 652
           + Y+ +  I  G +    K   K+    ++  K       +      + +E + LR L+H
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKS-DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64

Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE----YTEQNVATIISQ 705
             I    +        +    +VME  +G D+ S ++   +      E+ V  +++Q
Sbjct: 65  PNIVRYYDRII--DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 44.2 bits (105), Expect = 2e-04
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 11/80 (13%)

Query: 464 GGELLHSLTRQS----YYTEYDIAHYIRQLLSGLDYMHRL-----SIAHLGLTPGDLLVA 514
           GG+L   +T+ +    Y  E  +   + QL   L   HR      ++ H  L P ++ + 
Sbjct: 91  GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 150

Query: 515 HPGGRHLLLTDFGLSRRITS 534
                ++ L DFGL+R +  
Sbjct: 151 GKQ--NVKLGDFGLARILNH 168

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 96.6 bits (241), Expect = 6e-22
 Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 9/156 (5%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--FKNELDIMNQLCHRNLVR 244
           F  E+GRG    VY  ++  +    A   +  +         FK E +++  L H N+VR
Sbjct: 30  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 89

Query: 245 LHDSY----ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH--R 298
            +DS+    + K    +++EL   G L   L R        +  + RQ+L GL ++H   
Sbjct: 90  FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT 149

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             I H  L   ++ +  P G  + + D GL+    +
Sbjct: 150 PPIIHRDLKCDNIFITGPTGS-VKIGDLGLATLKRA 184

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 51.2 bits (123), Expect = 9e-07
 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 20/109 (18%)

Query: 949  AYCVTSVLDGLQYLHWRGLC--HLNIEPDNVVMASVRSVQVKLIDLGC------TQRVTK 1000
            ++C   +L GLQ+LH R     H +++ DN +  +  +  VK+ DLG       +     
Sbjct: 133  SWC-RQILKGLQFLHTRTPPIIHRDLKCDN-IFITGPTGSVKIGDLGLATLKRASFAKAV 190

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            +GT         PEF APE+  EE      DV++ G+    + +   P+
Sbjct: 191  IGT---------PEFMAPEMY-EEKYDESVDVYAFGMCMLEMATSEYPY 229

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 45.0 bits (107), Expect = 1e-04
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 3/74 (4%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH--RLSIAHLGLTPGDLLVAHPGGRH 520
             G L   L R        +  + RQ+L GL ++H     I H  L   ++ +  P G  
Sbjct: 112 TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGS- 170

Query: 521 LLLTDFGLSRRITS 534
           + + D GL+    +
Sbjct: 171 VKIGDLGLATLKRA 184

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 44.3 bits (105), Expect = 1e-04
 Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 4/126 (3%)

Query: 583 EDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAK---LFEYSHDTLHQ 639
           E               +F  EI RG F  V K  +   T   VA       + +     +
Sbjct: 13  ELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTV-EVAWCELQDRKLTKSERQR 71

Query: 640 VNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNV 699
              E + L+ L+H  I    ++++ +       VLV E +    + +YL        + +
Sbjct: 72  FKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVL 131

Query: 700 ATIISQ 705
            +   Q
Sbjct: 132 RSWCRQ 137

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 97.9 bits (244), Expect = 6e-22
 Identities = 40/184 (21%), Positives = 62/184 (33%), Gaps = 31/184 (16%)

Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM----------TGKGN 221
           + VK + K I D Y     L +G    +         + YA K              K N
Sbjct: 21  KYVKEKDKYIND-YRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSN 77

Query: 222 QYKSL-------FKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSL--- 271
             K         FKNEL I+  + +   +         D   II E      +L      
Sbjct: 78  NDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYF 137

Query: 272 -----TRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLLLTD 325
                    +     I   I+ +L+   Y+H   +I H  + P ++L+   G   + L+D
Sbjct: 138 FVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNG--RVKLSD 195

Query: 326 FGLS 329
           FG S
Sbjct: 196 FGES 199

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 66.3 bits (162), Expect = 2e-11
 Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 21/124 (16%)

Query: 955  VLDGLQYLH-WRGLCHLNIEPDNVVMASVRSVQVKLIDLGC------TQRVTKLGTLIHP 1007
            VL+   Y+H  + +CH +++P N++M      +VKL D G        +     GT    
Sbjct: 160  VLNSFSYIHNEKNICHRDVKPSNILMDKNG--RVKLSDFGESEYMVDKKIKGSRGT---- 213

Query: 1008 INTPNPEFAAPEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPFRGQ-SEPETRQNVNFV 1064
                  EF  PE  + E  +   + D+WS G+  YV+     PF  + S  E   N+   
Sbjct: 214  -----YEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK 268

Query: 1065 RYRF 1068
               +
Sbjct: 269  NIEY 272

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 61.3 bits (149), Expect = 7e-10
 Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 28/130 (21%)

Query: 1144 APEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPFRGQ-SEPETRQNVNFVRYRF----- 1195
             PE  + E  +   + D+WS G+  YV+     PF  + S  E   N+      +     
Sbjct: 218  PPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRN 277

Query: 1196 -----------EYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLV---------P 1235
                             L+ E   FL L  ++ P +R T E+  ++ WL           
Sbjct: 278  HFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREF 337

Query: 1236 SEYMIKKRER 1245
            S+ + KKR++
Sbjct: 338  SKELYKKRKK 347

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 49.7 bits (119), Expect = 4e-06
 Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 11/76 (14%)

Query: 463 PGGELLHSL--------TRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLV 513
               +L               +     I   I+ +L+   Y+H   +I H  + P ++L+
Sbjct: 126 ENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM 185

Query: 514 AHPGGRHLLLTDFGLS 529
              G   + L+DFG S
Sbjct: 186 DKNG--RVKLSDFGES 199

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 96.6 bits (241), Expect = 7e-22
 Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 6/164 (3%)

Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIM 234
                   D       LG+G  GIVY   + S+    A K +  + ++Y      E+ + 
Sbjct: 14  LLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALH 73

Query: 235 NQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY----YTEYDIAHYIRQLL 290
             L H+N+V+   S+       I  E   GG  L +L R  +      E  I  Y +Q+L
Sbjct: 74  KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGS-LSALLRSKWGPLKDNEQTIGFYTKQIL 132

Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            GL Y+H   I H  +   ++L+    G  L ++DFG S+R+  
Sbjct: 133 EGLKYLHDNQIVHRDIKGDNVLINTYSG-VLKISDFGTSKRLAG 175

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 54.2 bits (131), Expect = 9e-08
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 6/104 (5%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN-TPNP 1013
            +L+GL+YLH   + H +I+ DN V+ +  S  +K+ D G ++R+  +         T   
Sbjct: 131  ILEGLKYLHDNQIVHRDIKGDN-VLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQ- 188

Query: 1014 EFAAPEVLAEEPI--FPQTDVWSAGVLAYVLLSGASPFRGQSEP 1055
             + APE++ + P       D+WS G     + +G  PF    EP
Sbjct: 189  -YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP 231

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 50.8 bits (122), Expect = 1e-06
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 6/76 (7%)

Query: 463 PGGELLHSLTRQSY----YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
           PGG L  +L R  +      E  I  Y +Q+L GL Y+H   I H  +   ++L+    G
Sbjct: 102 PGGSL-SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSG 160

Query: 519 RHLLLTDFGLSRRITS 534
             L ++DFG S+R+  
Sbjct: 161 -VLKISDFGTSKRLAG 175

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 96.2 bits (240), Expect = 1e-21
 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 4/164 (2%)

Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNEL 231
             V+    P  + ++   ELG G  G VY A  + +G   AAKV+  K  +    +  E+
Sbjct: 9   EHVRRDLDP-NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEI 67

Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLT-RQSYYTEYDIAHYIRQLL 290
           +I+    H  +V+L  +Y       I+ E   GG +   +       TE  I    RQ+L
Sbjct: 68  EILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML 127

Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             L+++H   I H  L  G++L+   G   + L DFG+S +   
Sbjct: 128 EALNFLHSKRIIHRDLKAGNVLMTLEG--DIRLADFGVSAKNLK 169

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 50.4 bits (121), Expect = 2e-06
 Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 24/113 (21%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
                  +L+ L +LH + + H +++  NV+M       ++L D G   +       R + 
Sbjct: 120  QVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL--EGDIRLADFGVSAKNLKTLQKRDSF 177

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIF-----PQTDVWSAGVLAYVLLSGASP 1048
            +GT         P + APEV+  E +       + D+WS G+    +     P
Sbjct: 178  IGT---------PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 45.0 bits (107), Expect = 9e-05
 Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 9/126 (7%)

Query: 594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY-SHDTLHQVNTEFDNLRSLRH 652
           P + ++ + E+  G F  V KA  K  T  L AAK+ E  S + L     E + L +  H
Sbjct: 17  PNEVWEIVGELGDGAFGKVYKAKNKE-TGALAAAKVIETKSEEELEDYIVEIEILATCDH 75

Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLS-YLSSRHEYTEQNVATIISQAWE--H 709
             I  LL AY           +++E   G  V +  L      TE  +  +  Q  E  +
Sbjct: 76  PYIVKLLGAYYHDGK----LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALN 131

Query: 710 YLKKNR 715
           +L   R
Sbjct: 132 FLHSKR 137

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 96.2 bits (240), Expect = 1e-21
 Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 4/164 (2%)

Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNE 230
             ++       + +   +++G+G  G V+  ++  + +  A K++   +        + E
Sbjct: 11  PGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE 70

Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + +++Q     + + + SY       II E  GGG  L  L       E  IA  +R++L
Sbjct: 71  ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREIL 129

Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            GLDY+H     H  +   ++L++  G   + L DFG++ ++T 
Sbjct: 130 KGLDYLHSEKKIHRDIKAANVLLSEHG--EVKLADFGVAGQLTD 171

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 54.2 bits (131), Expect = 1e-07
 Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 19/109 (17%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
            A  +  +L GL YLH     H +I+  NV+++     +VKL D G   Q       R T 
Sbjct: 122  ATILREILKGLDYLHSEKKIHRDIKAANVLLSE--HGEVKLADFGVAGQLTDTQIKRNTF 179

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            +GT         P + APEV+ +     + D+WS G+ A  L  G  P 
Sbjct: 180  VGT---------PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPH 219

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 44.6 bits (106), Expect = 1e-04
 Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 10/133 (7%)

Query: 587 IEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKL--FEYSHDTLHQVNTEF 644
           ++     P + +  + +I +G F  V K  +   T+ +VA K+   E + D +  +  E 
Sbjct: 13  MQNLKADPEELFTKLEKIGKGSFGEVFKGIDNR-TQKVVAIKIIDLEEAEDEIEDIQQEI 71

Query: 645 DNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIIS 704
             L       +     +Y   T       ++ME L G   L  L       E  +ATI+ 
Sbjct: 72  TVLSQCDSPYVTKYYGSYLKDTK----LWIIMEYLGGGSALDLLEPG-PLDETQIATILR 126

Query: 705 QAWE--HYLKKNR 715
           +  +   YL   +
Sbjct: 127 EILKGLDYLHSEK 139

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 42.7 bits (101), Expect = 6e-04
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GG  L  L       E  IA  +R++L GLDY+H     H  +   ++L++  G   + L
Sbjct: 104 GGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG--EVKL 160

Query: 524 TDFGLSRRITS 534
            DFG++ ++T 
Sbjct: 161 ADFGVAGQLTD 171

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 95.9 bits (239), Expect = 1e-21
 Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 24/174 (13%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKV--MTGKGNQYKSLFKNELDIMNQLC-HRN 241
           +   +++G G  G V+  V+R  G  YA K       G+  +     E+     L  H +
Sbjct: 13  FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 72

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMH 297
           +VR   ++   D   I +E   GG L  +++      SY+ E ++   + Q+  GL Y+H
Sbjct: 73  VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 132

Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLL-----------------LTDFGLSRRITS 334
            +S+ H+ + P ++ ++     +                   + D G   RI+S
Sbjct: 133 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 186

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 58.1 bits (141), Expect = 5e-09
 Identities = 25/118 (21%), Positives = 41/118 (34%), Gaps = 23/118 (19%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNV-----------------VMASVRSVQVKLIDLGCTQR 997
            V  GL+Y+H   L H++I+P N+                    +   V  K+ DLG   R
Sbjct: 124  VGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 183

Query: 998  VTKLGTLIHPINTPNPEFAAPEVLAEE-PIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054
            ++               F A EVL E     P+ D+++  +            R   +
Sbjct: 184  ISSPQVE---EGDSR--FLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ 236

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 47.7 bits (114), Expect = 1e-05
 Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 21/93 (22%)

Query: 463 PGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
            GG L  +++      SY+ E ++   + Q+  GL Y+H +S+ H+ + P ++ ++    
Sbjct: 94  NGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSI 153

Query: 519 RHLL-----------------LTDFGLSRRITS 534
            +                   + D G   RI+S
Sbjct: 154 PNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 186

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 46.2 bits (110), Expect = 3e-05
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 6/94 (6%)

Query: 1144 APEVLAEE-PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            A EVL E     P+ D+++  +            R   +          + R   + + L
Sbjct: 198  ANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH-----EIRQGRLPRIPQVL 252

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPS 1236
            +QE T  L ++    P +RP+     ++  L+ +
Sbjct: 253  SQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 98.7 bits (246), Expect = 1e-21
 Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 7/169 (4%)

Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM----TGKGNQYKSLFKNE 230
           K   +     Y  GD LG G  G V       +G   A K++        +    + + E
Sbjct: 8   KHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKI-RRE 66

Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           +  +    H ++++L+    T     ++ E   GGEL   + +     E +     +Q+L
Sbjct: 67  IQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQIL 126

Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
           SG+DY HR  + H  L P ++L+      +  + DFGLS  ++    L 
Sbjct: 127 SGVDYCHRHMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLR 173

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 67.5 bits (165), Expect = 1e-11
 Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 22/166 (13%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--N 1012
            +L G+ Y H   + H +++P+NV++ +   +  K+ D G    +   G  +    T   +
Sbjct: 125  ILSGVDYCHRHMVVHRDLKPENVLLDA--HMNAKIADFG-LSNMMSDGEFLR---TSCGS 178

Query: 1013 PEFAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL 1071
            P +AAPEV++      P+ D+WS+GV+ Y LL G  PF     P   + +    +     
Sbjct: 179  PNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQ- 237

Query: 1072 FKELTQEATRFL--MLIFKHEVD---WITLANNIDHEFWHVKDLKR 1112
               L       L  ML    +VD     T+ +  +HE W  +DL +
Sbjct: 238  --YLNPSVISLLKHML----QVDPMKRATIKDIREHE-WFKQDLPK 276

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 60.6 bits (147), Expect = 2e-09
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 4/91 (4%)

Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APEV++      P+ D+WS+GV+ Y LL G  PF     P   + +    +        L
Sbjct: 183  APEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQ---YL 239

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
                   L  + +  P KR T+++  E+ W 
Sbjct: 240  NPSVISLLKHMLQVDPMKRATIKDIREHEWF 270

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 50.9 bits (122), Expect = 2e-06
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL   + +     E +     +Q+LSG+DY HR  + H  L P ++L+      +  
Sbjct: 99  SGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHM--NAK 156

Query: 523 LTDFGLSRRITSFGKLN 539
           + DFGLS  ++    L 
Sbjct: 157 IADFGLSNMMSDGEFLR 173

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 95.5 bits (238), Expect = 2e-21
 Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 11/166 (6%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLCHRN 241
           D Y+  + +G G T +V  A         A K +   K          E+  M+Q  H N
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYY--------TEYDIAHYIRQLLSGL 293
           +V  + S+  KD   ++ +L  GG +L  +               E  IA  +R++L GL
Sbjct: 75  IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134

Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
           +Y+H+    H  +  G++L+   G   + + DFG+S  + + G + 
Sbjct: 135 EYLHKNGQIHRDVKAGNILLGEDG--SVQIADFGVSAFLATGGDIT 178

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 49.3 bits (118), Expect = 4e-06
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 25/115 (21%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ----------- 996
            A  +  VL+GL+YLH  G  H +++  N+++       V++ D G               
Sbjct: 124  ATILREVLEGLEYLHKNGQIHRDVKAGNILLGE--DGSVQIADFGVSAFLATGGDITRNK 181

Query: 997  -RVTKLGTLIHPINTPNPEFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPF 1049
             R T +GT         P + APEV+ +   +  + D+WS G+ A  L +GA+P+
Sbjct: 182  VRKTFVGT---------PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 41.9 bits (99), Expect = 9e-04
 Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 28/157 (17%)

Query: 571 LAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKL- 629
           +++D   L +S+             D Y+    I  G  +VV  A      E  VA K  
Sbjct: 1   MSEDSSALPWSI-----------NRDDYELQEVIGSGATAVVQAAYCAPKKE-KVAIKRI 48

Query: 630 -FEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQG---ADVL 685
             E    ++ ++  E   +    H  I S   ++        + + VM+ L G    D++
Sbjct: 49  NLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF---VVKDELWL-VMKLLSGGSVLDII 104

Query: 686 SYLSSRHEY-----TEQNVATIISQAWE--HYLKKNR 715
            ++ ++ E+      E  +ATI+ +  E   YL KN 
Sbjct: 105 KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 141

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 95.8 bits (239), Expect = 3e-21
 Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 6/158 (3%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---TGKGNQYKSLFKNELDIMNQLCHRN 241
           Y   + LG G  G V  A    + +  A K +     K +      + E+  +  L H +
Sbjct: 11  YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +++L+D   T     ++ E AGG EL   +  +   TE +   + +Q++  ++Y HR  I
Sbjct: 71  IIKLYDVITTPTDIVMVIEYAGG-ELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
            H  L P +LL+      ++ + DFGLS  +T    L 
Sbjct: 130 VHRDLKPENLLLDDNL--NVKIADFGLSNIMTDGNFLK 165

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 68.5 bits (168), Expect = 3e-12
 Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 28/169 (16%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP---INTP 1011
            ++  ++Y H   + H +++P+N+++    ++ VK+ D G       L  ++     + T 
Sbjct: 117  IICAIEYCHRHKIVHRDLKPENLLLDD--NLNVKIADFG-------LSNIMTDGNFLKTS 167

Query: 1012 --NPEFAAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
              +P +AAPEV+  +    P+ DVWS G++ YV+L G  PF  +  P   + VN   Y  
Sbjct: 168  CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVM 227

Query: 1069 EYLFKELTQEATRFL--MLIFKHEVD---WITLANNIDHEFWHVKDLKR 1112
                  L+  A   +  M+      D    IT+        W   +L  
Sbjct: 228  P---DFLSPGAQSLIRRMI----VADPMQRITIQEIRRDP-WFNVNLPD 268

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 60.8 bits (148), Expect = 9e-10
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APEV+  +    P+ DVWS G++ YV+L G  PF  +  P   + VN   Y        L
Sbjct: 175  APEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP---DFL 231

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            +  A   +  +    P +R T++E   + W 
Sbjct: 232  SPGAQSLIRRMIVADPMQRITIQEIRRDPWF 262

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 52.3 bits (126), Expect = 4e-07
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           GGEL   +  +   TE +   + +Q++  ++Y HR  I H  L P +LL+      ++ +
Sbjct: 92  GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNL--NVKI 149

Query: 524 TDFGLSRRITSFGKLN 539
            DFGLS  +T    L 
Sbjct: 150 ADFGLSNIMTDGNFLK 165

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 94.7 bits (236), Expect = 3e-21
 Identities = 31/168 (18%), Positives = 62/168 (36%), Gaps = 18/168 (10%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLCHRN 241
             ++    LGRG  G+V+ A  +    NYA K +        +     E+  + +L H  
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 242 LVRLHDSYETKDSFT------------IISELAGGGELLHSLTRQSYYTEYD---IAHYI 286
           +VR  +++  K++              I  +L     L   +  +    E +     H  
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124

Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            Q+   ++++H   + H  L P ++         + + DFGL   +  
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD--VVKVGDFGLVTAMDQ 170

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 55.8 bits (135), Expect = 3e-08
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 23/150 (15%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGC-------------TQRVTKL 1001
            + + +++LH +GL H +++P N+         VK+ D G                 +   
Sbjct: 127  IAEAVEFLHSKGLMHRDLKPSNIFFT--MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184

Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQN 1060
                  + T    + +PE +       + D++S G++ + LL    PF  Q E   T  +
Sbjct: 185  ARHTGQVGTKL--YMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQMERVRTLTD 239

Query: 1061 VNFVRYRFEYLFKELTQEATRFLMLIFKHE 1090
            V     +F  LF +        +  +    
Sbjct: 240  VR--NLKFPPLFTQKYPCEYVMVQDMLSPS 267

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 54.7 bits (132), Expect = 7e-08
 Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 10/107 (9%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQNVNFVRYRFEYLFKEL 1202
            +PE +       + D++S G++ + LL    PF  Q E   T  +V     +F  LF + 
Sbjct: 198  SPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQMERVRTLTDVR--NLKFPPLFTQK 252

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL----VPSEYMIKKRER 1245
                   +  +   +P +RP      EN        P + ++++R R
Sbjct: 253  YPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFPGKTVLRQRSR 299

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 47.3 bits (113), Expect = 2e-05
 Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 5/75 (6%)

Query: 463 PGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
               L   +  +    E +     H   Q+   ++++H   + H  L P ++        
Sbjct: 98  RKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-- 155

Query: 520 HLLLTDFGLSRRITS 534
            + + DFGL   +  
Sbjct: 156 VVKVGDFGLVTAMDQ 170

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 93.1 bits (232), Expect = 1e-20
 Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 31/173 (17%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-----------------------TGKGN 221
           Y   DE+G+G  G+V  A   +    YA KV+                        G   
Sbjct: 15  YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74

Query: 222 QYKSLF---KNELDIMNQLCHRNLVRLHDSYE--TKDSFTIISELAGGGELLHSLTRQSY 276
           Q +        E+ I+ +L H N+V+L +  +   +D   ++ EL   G ++   T +  
Sbjct: 75  QPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPL 134

Query: 277 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            +E     Y + L+ G++Y+H   I H  + P +LLV   G  H+ + DFG+S
Sbjct: 135 -SEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG--HIKIADFGVS 184

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 71.1 bits (175), Expect = 2e-13
 Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 11/137 (8%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH-PINTPNP 1013
            ++ G++YLH++ + H +I+P N+++       +K+ D G +        L+   + TP  
Sbjct: 146  LIKGIEYLHYQKIIHRDIKPSNLLVGEDG--HIKIADFGVSNEFKGSDALLSNTVGTPA- 202

Query: 1014 EFAAPEVLAEEPIF---PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
             F APE L+E          DVW+ GV  Y  + G  PF  +        +      F  
Sbjct: 203  -FMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD 261

Query: 1071 LFKELTQEATRFL--ML 1085
               ++ ++    +  ML
Sbjct: 262  -QPDIAEDLKDLITRML 277

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 58.4 bits (142), Expect = 4e-09
 Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 4/93 (4%)

Query: 1144 APEVLAEEPIF---PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1200
            APE L+E          DVW+ GV  Y  + G  PF  +        +      F     
Sbjct: 205  APESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD-QP 263

Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            ++ ++    +  +  + P  R  V E   + W+
Sbjct: 264  DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 51.1 bits (123), Expect = 1e-06
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
             G ++   T +   +E     Y + L+ G++Y+H   I H  + P +LLV   G  H+ 
Sbjct: 121 NQGPVMEVPTLKPL-SEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG--HIK 177

Query: 523 LTDFGLS 529
           + DFG+S
Sbjct: 178 IADFGVS 184

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 91.6 bits (228), Expect = 6e-20
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 10/170 (5%)

Query: 169 ARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLF 227
           A         +P+   Y  G  LG G  G VY  +  S     A K +   + + +  L 
Sbjct: 29  ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 88

Query: 228 KN-----ELDIMNQLCHR--NLVRLHDSYETKDSFTIISELA-GGGELLHSLTRQSYYTE 279
                  E+ ++ ++      ++RL D +E  DSF +I E      +L   +T +    E
Sbjct: 89  NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE 148

Query: 280 YDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
                +  Q+L  + + H   + H  +   ++L+    G  L L DFG  
Sbjct: 149 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSG 197

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 72.4 bits (178), Expect = 1e-13
 Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 5/101 (4%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            VL+ +++ H  G+ H +I+ +N+++  +   ++KLID G    + K         T    
Sbjct: 158  VLEAVRHCHNCGVLHRDIKDENILI-DLNRGELKLIDFGSG-ALLKDTVYTDFDGTRV-- 213

Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1054
            ++ PE +           VWS G+L Y ++ G  PF    E
Sbjct: 214  YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 254

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 59.7 bits (145), Expect = 2e-09
 Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 10/91 (10%)

Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
             PE +           VWS G+L Y ++ G  PF    E      +   +  F      +
Sbjct: 216  PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ---RV 266

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + E    +       P  RPT EE   + W+
Sbjct: 267  SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 297

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 44.6 bits (106), Expect = 1e-04
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 1/67 (1%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           P  +L   +T +    E     +  Q+L  + + H   + H  +   ++L+    G  L 
Sbjct: 132 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LK 190

Query: 523 LTDFGLS 529
           L DFG  
Sbjct: 191 LIDFGSG 197

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 90.5 bits (225), Expect = 1e-19
 Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 6/170 (3%)

Query: 166 RTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKS 225
           R   +  +     +P  + +D  ++LG G  G VY A+ + +G+  A K +         
Sbjct: 13  RQLKKLDEDSLTKQP-EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV--PVESDLQ 69

Query: 226 LFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAH 284
               E+ IM Q    ++V+ + SY       I+ E  G G +   +  R    TE +IA 
Sbjct: 70  EIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT 129

Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            ++  L GL+Y+H +   H  +  G++L+   G  H  L DFG++ ++T 
Sbjct: 130 ILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEG--HAKLADFGVAGQLTD 177

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 56.6 bits (137), Expect = 2e-08
 Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 19/109 (17%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
            A  + S L GL+YLH+    H +I+  N+++        KL D G   Q       R T 
Sbjct: 128  ATILQSTLKGLEYLHFMRKIHRDIKAGNILLN--TEGHAKLADFGVAGQLTDTMAKRNTV 185

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049
            +GT         P + APEV+ E       D+WS G+ A  +  G  P+
Sbjct: 186  IGT---------PFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 46.2 bits (110), Expect = 4e-05
 Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 13/131 (9%)

Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRS 649
            T+ P + +  + ++  G +  V KA  K  T  +VA K      D L ++  E   ++ 
Sbjct: 23  LTKQPEEVFDVLEKLGEGSYGSVYKAIHKE-TGQIVAIKQVPVESD-LQEIIKEISIMQQ 80

Query: 650 LRHERIASLLEAYKPSTTASNIAVLVMEKLQG---ADVLSYLSSRHEYTEQNVATIISQA 706
                +     +Y  +T       +VME       +D++   +     TE  +ATI+   
Sbjct: 81  CDSPHVVKYYGSYFKNTD----LWIVMEYCGAGSVSDIIRLRNKT--LTEDEIATILQST 134

Query: 707 WE--HYLKKNR 715
            +   YL   R
Sbjct: 135 LKGLEYLHFMR 145

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 90.4 bits (225), Expect = 1e-19
 Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 8/169 (4%)

Query: 173 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFK 228
             + R K   D + FG  LG G    V  A E ++ R YA K++      K N+   +  
Sbjct: 21  PPQPRKKRPED-FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV-T 78

Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
            E D+M++L H   V+L+ +++  +        A  GELL  + +   + E     Y  +
Sbjct: 79  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138

Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           ++S L+Y+H   I H  L P ++L+      H+ +TDFG ++ ++   K
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESK 185

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 56.9 bits (138), Expect = 1e-08
 Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 32/170 (18%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN-- 1012
            ++  L+YLH +G+ H +++P+N+++     + +++ D G      K+ +        N  
Sbjct: 139  IVSALEYLHGKGIIHRDLKPENILLNE--DMHIQITDFG----TAKVLSPESKQARANSF 192

Query: 1013 ---PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
                ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y F 
Sbjct: 193  VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252

Query: 1069 EYLFKE--------LTQEATRFL--------MLIFKH----EVDWITLAN 1098
            E  F +        L  +AT+ L          +  H     V W  L  
Sbjct: 253  EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ 302

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 54.9 bits (133), Expect = 5e-08
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
             GELL  + +   + E     Y  +++S L+Y+H   I H  L P ++L+      H+ 
Sbjct: 113 KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM--HIQ 170

Query: 523 LTDFGLSRRITSFGK 537
           +TDFG ++ ++   K
Sbjct: 171 ITDFGTAKVLSPESK 185

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 48.0 bits (115), Expect = 1e-05
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y F    ++  
Sbjct: 200  SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP---EKFF 256

Query: 1204 QEATRFLMLIFKRAPGKR 1221
             +A   +  +      KR
Sbjct: 257  PKARDLVEKLLVLDATKR 274

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 89.8 bits (223), Expect = 3e-19
 Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 9/162 (5%)

Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYK---SLFKNELDIMNQLC 238
              +    E+G G  G VY A +  +    A K M+  G Q          E+  + +L 
Sbjct: 53  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N ++    Y  + +  ++ E   G         +    E +IA      L GL Y+H 
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS 172

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFG----LSRRITSFG 336
            ++ H  +  G++L++ PG   + L DFG    ++   +  G
Sbjct: 173 HNMIHRDVKAGNILLSEPG--LVKLGDFGSASIMAPANSFVG 212

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 49.7 bits (119), Expect = 3e-06
 Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 18/108 (16%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG----CTQRVTKLGTL 1004
            A      L GL YLH   + H +++  N++++      VKL D G         + +GT 
Sbjct: 157  AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE--PGLVKLGDFGSASIMAPANSFVGT- 213

Query: 1005 IHPINTPNPEFAAPEVLA---EEPIFPQTDVWSAGVLAYVLLSGASPF 1049
                    P + APEV+    E     + DVWS G+    L     P 
Sbjct: 214  --------PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 47.8 bits (114), Expect = 1e-05
 Identities = 32/168 (19%), Positives = 53/168 (31%), Gaps = 11/168 (6%)

Query: 554 PAMKHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVV 613
             +   + +   G    +       +    D    +  + P   +  + EI  G F  V 
Sbjct: 12  YDIPTTENLYFQGAMDPMPAGGRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVY 71

Query: 614 KAAEKANTENLVAAKLFEY----SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTAS 669
            A +      +VA K   Y    S++    +  E   L+ LRH         Y    T  
Sbjct: 72  FARDVR-NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT-- 128

Query: 670 NIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE--HYLKKNR 715
             A LVME   G+        +    E  +A +   A +   YL  + 
Sbjct: 129 --AWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 174

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 88.9 bits (221), Expect = 3e-19
 Identities = 31/172 (18%), Positives = 62/172 (36%), Gaps = 12/172 (6%)

Query: 169 ARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK------VMTGKGNQ 222
                     +     Y  G  LG+G  G V+     +     A K      V+      
Sbjct: 17  PTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLS 76

Query: 223 YKSLFKNELDIMNQL----CHRNLVRLHDSYETKDSFTIISELAG-GGELLHSLTRQSYY 277
                  E+ ++ ++     H  ++RL D +ET++ F ++ E      +L   +T +   
Sbjct: 77  DSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPL 136

Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            E     +  Q+++ + + H   + H  +   ++L+    G    L DFG  
Sbjct: 137 GEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGC-AKLIDFGSG 187

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 71.2 bits (175), Expect = 3e-13
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 5/101 (4%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            V+  +Q+ H RG+ H +I+ +N+++  +R    KLID G    +           T    
Sbjct: 148  VVAAIQHCHSRGVVHRDIKDENILI-DLRRGCAKLIDFGSG-ALLHDEPYTDFDGTRV-- 203

Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSE 1054
            ++ PE ++          VWS G+L Y ++ G  PF    E
Sbjct: 204  YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE 244

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 58.9 bits (143), Expect = 3e-09
 Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 10/91 (10%)

Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
             PE ++          VWS G+L Y ++ G  PF    E      +      F      +
Sbjct: 206  PPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPA---HV 256

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + +    +       P  RP++EE   + W+
Sbjct: 257  SPDCCALIRRCLAPKPSSRPSLEEILLDPWM 287

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 45.0 bits (107), Expect = 8e-05
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           P  +L   +T +    E     +  Q+++ + + H   + H  +   ++L+    G    
Sbjct: 122 PAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGC-AK 180

Query: 523 LTDFGLS 529
           L DFG  
Sbjct: 181 LIDFGSG 187

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 89.0 bits (221), Expect = 5e-19
 Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 12/162 (7%)

Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HR 240
              ++  + +G G  G VY      +G+  A KVM   G++ + + K E++++ +   HR
Sbjct: 23  AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEI-KQEINMLKKYSHHR 81

Query: 241 NLVRLHDSY------ETKDSFTIISELAGGGEL--LHSLTRQSYYTEYDIAHYIRQLLSG 292
           N+   + ++         D   ++ E  G G +  L   T+ +   E  IA+  R++L G
Sbjct: 82  NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141

Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           L ++H+  + H  +   ++L+       + L DFG+S ++  
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTENA--EVKLVDFGVSAQLDR 181

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 52.0 bits (125), Expect = 7e-07
 Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 24/114 (21%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
            AY    +L GL +LH   + H +I+  NV++    + +VKL+D G   Q       R T 
Sbjct: 132  AYICREILRGLSHLHQHKVIHRDIKGQNVLLT--ENAEVKLVDFGVSAQLDRTVGRRNTF 189

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFPQT-----DVWSAGVLAYVLLSGASPF 1049
            +GT         P + APEV+A +     T     D+WS G+ A  +  GA P 
Sbjct: 190  IGT---------PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 48.5 bits (116), Expect = 7e-06
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 13/154 (8%)

Query: 570 TLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKL 629
           ++A D P  +    D     +   P   ++ +  +  G +  V K      T  L A K+
Sbjct: 1   SMASDSPARSLDEIDLS---ALRDPAGIFELVELVGNGTYGQVYKGRHVK-TGQLAAIKV 56

Query: 630 FEYSHDTLHQVNTEFDNLRSL-RHERIASLLEAYKPSTTASNIAVL--VMEKLQG---AD 683
            + + D   ++  E + L+    H  IA+   A+           L  VME        D
Sbjct: 57  MDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD 116

Query: 684 VLSYLSSRHEYTEQNVATIISQAWE--HYLKKNR 715
           ++          E+ +A I  +      +L +++
Sbjct: 117 LIKNTKGN-TLKEEWIAYICREILRGLSHLHQHK 149

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 90.0 bits (223), Expect = 5e-19
 Identities = 29/181 (16%), Positives = 66/181 (36%), Gaps = 8/181 (4%)

Query: 163 YSYRTYARGRQVKTRTKPITDAYDFGDELGRGVT--GIVYHAVERSSGRNYAAKVM--TG 218
           + +       Q  +   P    Y+    +G+G      V  A  + +G     + +    
Sbjct: 5   HHHHMENLYFQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA 64

Query: 219 KGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYT 278
             N+  +  + EL +     H N+V    ++   +   +++     G     +       
Sbjct: 65  CSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDG 124

Query: 279 --EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
             E  IA+ ++ +L  LDY+H +   H  +    +L++  G   + L+    +  + S G
Sbjct: 125 MNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG--KVYLSGLRSNLSMISHG 182

Query: 337 K 337
           +
Sbjct: 183 Q 183

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 57.2 bits (138), Expect = 2e-08
 Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 14/111 (12%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQ-------RVTK 1000
            AY +  VL  L Y+H  G  H +++  +++++     +V L  L            +   
Sbjct: 131  AYILQGVLKALDYIHHMGYVHRSVKASHILISV--DGKVYLSGLRSNLSMISHGQRQRVV 188

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPF 1049
                 + +      + +PEVL +       ++D++S G+ A  L +G  PF
Sbjct: 189  HDFPKYSVKVLP--WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF 237

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 87.2 bits (216), Expect = 3e-18
 Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 6/155 (3%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHR 240
           D ++   ELG G  G+V+    + SG   A K++  +        + + EL ++++    
Sbjct: 33  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSP 91

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RL 299
            +V  + ++ +    +I  E   GG L   L +     E  +      ++ GL Y+  + 
Sbjct: 92  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 151

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            I H  + P ++LV   G   + L DFG+S ++  
Sbjct: 152 KIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLID 184

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 52.9 bits (127), Expect = 4e-07
 Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 18/121 (14%)

Query: 949  AYCVTSVLDGLQYLHWRG-LCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVTKL 1001
                 +V+ GL YL  +  + H +++P N+++ S    ++KL D G       +   + +
Sbjct: 134  GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDSMANSFV 191

Query: 1002 GTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            GT           + +PE L       Q+D+WS G+    +  G  P       E     
Sbjct: 192  GT---------RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 242

Query: 1062 N 1062
             
Sbjct: 243  G 243

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 44.8 bits (106), Expect = 1e-04
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHLL 522
           GG L   L +     E  +      ++ GL Y+  +  I H  + P ++LV   G   + 
Sbjct: 115 GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIK 172

Query: 523 LTDFGLSRRITS 534
           L DFG+S ++  
Sbjct: 173 LCDFGVSGQLID 184

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 86.3 bits (214), Expect = 4e-18
 Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 15/159 (9%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLV 243
                 L  G    VY A +  SGR YA K +     +       E+  M +L  H N+V
Sbjct: 30  LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIV 89

Query: 244 RLHDSYETKDS--------FTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
           +   +              F +++EL  G   E L  +  +   +   +     Q    +
Sbjct: 90  QFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149

Query: 294 DYMHRLS--IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            +MHR    I H  L   +LL+++ G   + L DFG + 
Sbjct: 150 QHMHRQKPPIIHRDLKVENLLLSNQG--TIKLCDFGSAT 186

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 55.1 bits (133), Expect = 6e-08
 Identities = 22/117 (18%), Positives = 51/117 (43%), Gaps = 22/117 (18%)

Query: 955  VLDGLQYLHWRG--LCHLNIEPDNVVMASVRSVQVKLIDLG----------CTQRVTKLG 1002
                +Q++H +   + H +++ +N+++++  ++  KL D G           +    +  
Sbjct: 145  TCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTI--KLCDFGSATTISHYPDYSWSAQRRA 202

Query: 1003 TLIHPIN---TPNPEFAAPEVL---AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
             +   I    TP   +  PE++   +  PI  + D+W+ G + Y+L     PF   +
Sbjct: 203  LVEEEITRNTTPM--YRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA 257

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 46.7 bits (111), Expect = 4e-05
 Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 8/86 (9%)

Query: 1144 APEVL---AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1200
             PE++   +  PI  + D+W+ G + Y+L     PF   ++      +   +Y       
Sbjct: 218  TPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK----LRIVNGKYSIPP-HD 272

Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEE 1226
                     +  + +  P +R ++ E
Sbjct: 273  TQYTVFHSLIRAMLQVNPEERLSIAE 298

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 44.0 bits (104), Expect = 2e-04
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 7/72 (9%)

Query: 464 GGELLHSLTR---QSYYTEYDIAHYIRQLLSGLDYMHRLS--IAHLGLTPGDLLVAHPGG 518
            G+L+  L +   +   +   +     Q    + +MHR    I H  L   +LL+++ G 
Sbjct: 117 KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQG- 175

Query: 519 RHLLLTDFGLSR 530
             + L DFG + 
Sbjct: 176 -TIKLCDFGSAT 186

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 87.0 bits (215), Expect = 4e-18
 Identities = 25/200 (12%), Positives = 52/200 (26%), Gaps = 37/200 (18%)

Query: 173 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL---FKN 229
            V +            + L  G   +V+   +     ++A KV T      +S       
Sbjct: 52  TVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHE 111

Query: 230 ELDIMNQLCHRN------------------------LVRLHDSYETKD--SFTIISELAG 263
                 +L   +                          +L    +     ++ ++   A 
Sbjct: 112 ATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS 171

Query: 264 G-----GELLHSLTRQSYYTEYDIAHYI-RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG 317
                    L  +            H +  QL+     +    + H   TP +L +   G
Sbjct: 172 VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDG 231

Query: 318 GRHLLLTDFGLSRRITSFGK 337
              L+L D     ++ + G 
Sbjct: 232 --RLMLGDVSALWKVGTRGP 249

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 76.2 bits (187), Expect = 1e-14
 Identities = 30/195 (15%), Positives = 59/195 (30%), Gaps = 16/195 (8%)

Query: 864  LRRLRHEIGTRPEAHVEADALIESRRD-GHAPFFREKPITIPVVIGDKLEMKCLAVGEPK 922
              RL  E               ++       PF +  P      + + L +   A  + +
Sbjct: 116  AARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLE 175

Query: 923  PVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTS-VLDGLQYLHWRGLCHLNIEPDNVVMAS 981
             +                         + +T+ ++     L  +GL H +  PDN+ +  
Sbjct: 176  LLFSTLDF------VYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM- 228

Query: 982  VRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF--PQTDVWSAGVLA 1039
                ++ L D+     + K+GT     + P   +A  E L           + W  G+  
Sbjct: 229  -PDGRLMLGDVS---ALWKVGTRGPASSVP-VTYAPREFLNASTATFTHALNAWQLGLSI 283

Query: 1040 YVLLSGASPFRGQSE 1054
            Y +     PF   + 
Sbjct: 284  YRVWCLFLPFGLVTP 298

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 54.7 bits (131), Expect = 1e-07
 Identities = 14/110 (12%), Positives = 24/110 (21%), Gaps = 8/110 (7%)

Query: 1144 APEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPFRGQSEP---ETRQNVNFVRYRFEYL 1198
              E L           + W  G+  Y +     PF   +       ++    V       
Sbjct: 259  PREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLA 318

Query: 1199 F---KELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRER 1245
            F     L       +         +R    E  E    +  +  I     
Sbjct: 319  FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEISSSLS 368

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 52.4 bits (125), Expect = 6e-07
 Identities = 12/74 (16%), Positives = 23/74 (31%), Gaps = 2/74 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
              L      +       +     QL+     +    + H   TP +L +   G   L+L
Sbjct: 178 FSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDG--RLML 235

Query: 524 TDFGLSRRITSFGK 537
            D     ++ + G 
Sbjct: 236 GDVSALWKVGTRGP 249

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 47.0 bits (111), Expect = 3e-05
 Identities = 10/54 (18%), Positives = 17/54 (31%)

Query: 48  QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSV 101
            V +            + L  G   +V+   +     ++A KV T     S S 
Sbjct: 52  TVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSE 105

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 84.3 bits (208), Expect = 3e-17
 Identities = 26/199 (13%), Positives = 55/199 (27%), Gaps = 38/199 (19%)

Query: 173 QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---------------- 216
           +V++           G  LG+        A ++ +G ++   V                 
Sbjct: 63  RVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKE 122

Query: 217 ------------TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII------ 258
                         K  +    F    D++     + ++R+          +        
Sbjct: 123 EVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM 182

Query: 259 --SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP 316
             +    G  LL   +       +       Q++  L  +H   + H  L P D+++   
Sbjct: 183 QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQR 242

Query: 317 GGRHLLLTDFGLSRRITSF 335
           G   + LT F    R  + 
Sbjct: 243 G--GVFLTGFEHLVRDGAR 259

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 77.7 bits (191), Expect = 4e-15
 Identities = 32/227 (14%), Positives = 66/227 (29%), Gaps = 25/227 (11%)

Query: 853  INKYGAADTYTLRRLRHEIG-TRPEAHVEADALIESRRDGHAPFFREKPITIPVVI---- 907
                    +  +++++ E+   R    ++     +       PF   K      +I    
Sbjct: 106  PYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRL 165

Query: 908  -GDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTS-VLDGLQYLHWR 965
                + +       P+        G   L +        H     +T  V+  L  LH  
Sbjct: 166  DERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY 225

Query: 966  GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP 1025
            GL H  + P ++V+   +   V L        + + G  +    +    F  PE+ A   
Sbjct: 226  GLVHTYLRPVDIVLD--QRGGVFLTGFE---HLVRDGARVVSSVSR--GFEPPELEARRA 278

Query: 1026 IF-----------PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
                            D W+ G++ Y +     P    +     + +
Sbjct: 279  TISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWI 325

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 56.6 bits (136), Expect = 3e-08
 Identities = 13/101 (12%), Positives = 25/101 (24%), Gaps = 18/101 (17%)

Query: 1144 APEVLAEEPIF-----------PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1192
             PE+ A                   D W+ G++ Y +     P    +     + +    
Sbjct: 270  PPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWI---- 325

Query: 1193 YRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            +R       + Q     L    +     R    +  E    
Sbjct: 326  FRSCK---NIPQPVRALLEGFLRYPKEDRLLPLQAMETPEY 363

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 53.9 bits (129), Expect = 2e-07
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           G  LL   +       +       Q++  L  +H   + H  L P D+++   G   + L
Sbjct: 190 GEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG--GVFL 247

Query: 524 TDFGLSRRITSF 535
           T F    R  + 
Sbjct: 248 TGFEHLVRDGAR 259

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 43.8 bits (103), Expect = 3e-04
 Identities = 7/45 (15%), Positives = 16/45 (35%)

Query: 48  QVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT 92
           +V++           G  LG+        A ++ +G ++   V  
Sbjct: 63  RVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPY 107

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 79.7 bits (197), Expect = 4e-16
 Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 13/155 (8%)

Query: 186 DFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           +  + +GRG  G+V  A  R   ++ A K +  +    +  F  EL  ++++ H N+V+L
Sbjct: 11  EVEEVVGRGAFGVVCKAKWR--AKDVAIKQI--ESESERKAFIVELRQLSRVNHPNIVKL 66

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL---SGLDYMHRL--- 299
           + +    +   ++ E A GG L + L        Y  AH +   L    G+ Y+H +   
Sbjct: 67  YGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           ++ H  L P +LL+   GG  L + DFG +  I +
Sbjct: 125 ALIHRDLKPPNLLLVA-GGTVLKICDFGTACDIQT 158

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 48.9 bits (117), Expect = 5e-06
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 18/107 (16%)

Query: 958  GLQYLH---WRGLCHLNIEPDNVVMASVRSVQVKLIDLG-----CTQRVTKLGTLIHPIN 1009
            G+ YLH    + L H +++P N+++ +  +V +K+ D G      T      G+      
Sbjct: 114  GVAYLHSMQPKALIHRDLKPPNLLLVAGGTV-LKICDFGTACDIQTHMTNNKGS------ 166

Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
                 + APEV        + DV+S G++ + +++   PF     P 
Sbjct: 167  ---AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 210

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 81.9 bits (202), Expect = 7e-16
 Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 8/148 (5%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVM------TGKGNQYKSLFKNELDIMNQLCHRNLVR 244
           +GRG  G VY   +  +G+ YA K +        +G       +  L +++      +V 
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256

Query: 245 LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
           +  ++ T D  + I +L  GG+L + L++   ++E D+  Y  +++ GL++MH   + + 
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316

Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            L P ++L+   G  H+ ++D GL+   
Sbjct: 317 DLKPANILLDEHG--HVRISDLGLACDF 342

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 56.0 bits (135), Expect = 7e-08
 Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 18/112 (16%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV------TKLGTLIHPI 1008
            ++ GL+++H R + + +++P N+++       V++ DLG             +GT     
Sbjct: 301  IILGLEHMHNRFVVYRDLKPANILLDE--HGHVRISDLGLACDFSKKKPHASVGT----- 353

Query: 1009 NTPNPEFAAPEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
                  + APEVL +   +  + D +S G + + LL G SPFR     +  +
Sbjct: 354  ----HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE 401

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 51.0 bits (122), Expect = 2e-06
 Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 2/70 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG+L + L++   ++E D+  Y  +++ GL++MH   + +  L P ++L+   G  H+ 
Sbjct: 275 NGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVR 332

Query: 523 LTDFGLSRRI 532
           ++D GL+   
Sbjct: 333 ISDLGLACDF 342

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 47.2 bits (112), Expect = 4e-05
 Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 1/79 (1%)

Query: 1144 APEVLAEEPIFPQT-DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APEVL +   +  + D +S G + + LL G SPFR     +  +           L    
Sbjct: 358  APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 417

Query: 1203 TQEATRFLMLIFKRAPGKR 1221
            + E    L  + +R   +R
Sbjct: 418  SPELRSLLEGLLQRDVNRR 436

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 82.2 bits (202), Expect = 8e-16
 Identities = 101/698 (14%), Positives = 211/698 (30%), Gaps = 192/698 (27%)

Query: 150 HSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGD--ELGRGV--TGIVYHAVER 205
           H   +  E  E++Y Y+       +        D +D  D  ++ + +     + H +  
Sbjct: 3   HHHHMDFETGEHQYQYKDI-----LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS 57

Query: 206 SSGRNYAAKVMT---GKG-NQYKSLFKNELD-----IMNQLCHRNLVRLHDSYETKDSFT 256
               +   ++      K     +   +  L      +M+ +          S  T+    
Sbjct: 58  KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP---SMMTRMYIE 114

Query: 257 IISELAGGGELL--HSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA 314
               L    ++   ++++R   Y +      +RQ L             L L P   ++ 
Sbjct: 115 QRDRLYNDNQVFAKYNVSRLQPYLK------LRQAL-------------LELRPAKNVLI 155

Query: 315 H-PGGRHLLLTDFGLSRRITSFGKLNPLEYDV-RYVRQALRHP----WLNFADRKPTEDT 368
               G                 GK   +  DV    +   +      WLN  +     ++
Sbjct: 156 DGVLG----------------SGK-TWVALDVCLSYKVQCKMDFKIFWLNLKNC----NS 194

Query: 369 PKLNTDALRN-YYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTPDK 427
           P+   + L+   Y +  +W   +      + R ++S      R+          +P  + 
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR-IHSIQAELRRL-------LKSKPYENC 246

Query: 428 VLVSRDLRDVKTWED-NVPNRGPDVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYI 486
           +LV  ++++ K W   N+       K              LL   TR    T++  A   
Sbjct: 247 LLVLLNVQNAKAWNAFNL-----SCKI-------------LL--TTRFKQVTDFLSAATT 286

Query: 487 RQL-----LSGL--DYMHRLSIAHLGLTPGDL----LVAHPGGRHLLLTDFGLSRRITSF 535
             +        L  D +  L + +L   P DL    L  +P      L+    S R    
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP----RRLSIIAESIRD--- 339

Query: 536 GKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHTPTLAQDPPPLNY---SV--EDSPIE-- 588
             L   +     +K      +  +   +     P   +      +   SV    + I   
Sbjct: 340 -GLATWDN----WKHVNCDKLTTIIESSLNVLEPAEYRK----MFDRLSVFPPSAHIPTI 390

Query: 589 -----WSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTE 643
                W     +D    ++++H  K+S+V    EK   E+ +             ++  +
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLH--KYSLV----EKQPKESTI------SIPSIYLELKVK 438

Query: 644 FDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGAD--VLSYLSSRHEYTEQNVAT 701
            +N  +L H  I   ++ Y    T  +  ++        D    S++   H    ++   
Sbjct: 439 LENEYAL-HRSI---VDHYNIPKTFDSDDLI----PPYLDQYFYSHI-GHHLKNIEH--- 486

Query: 702 IISQAWE---------HYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWED 752
              +             +L++          K R   T         NT  L+ +K ++ 
Sbjct: 487 --PERMTLFRMVFLDFRFLEQ----------KIRHDSTAWNASGSILNT--LQQLKFYKP 532

Query: 753 NVPNRGPAID---YDL--NVVKSESHYQNGPDTYLLQL 785
            + +  P  +     +   + K E +      T LL++
Sbjct: 533 YICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRI 570

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 66.4 bits (161), Expect = 5e-11
 Identities = 76/485 (15%), Positives = 147/485 (30%), Gaps = 116/485 (23%)

Query: 598  YQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIAS 657
             +F+ E+ R  +  ++   +    +  +  +++    D L+  N  F      R +    
Sbjct: 80   QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK 139

Query: 658  LLEAYKPSTTASNIAV----------LVMEKLQGADVLS-------YLSSRHEYTEQNVA 700
            L +A      A N+ +          + ++      V         +L+ ++  + + V 
Sbjct: 140  LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL 199

Query: 701  TIISQAWEHYLKKNREQIADTADKSRIPRTIREYRE------QSANTAN----LRDVKTW 750
             ++ Q   + +  N    +D +  S I   I   +       +S    N    L +V   
Sbjct: 200  EML-QKLLYQIDPNWTSRSDHS--SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV--Q 254

Query: 751  EDNVPNRGPAIDY---------DLNVVKSESHYQNGPDTYLLQLRDVDFPVRLRE----Y 797
                 N   A +             V    S       T  + L      +   E     
Sbjct: 255  NAKAWN---AFNLSCKILLTTRFKQVTDFLS----AATTTHISLDHHSMTLTPDEVKSLL 307

Query: 798  IKVASTRP-DL-RLSTGFNCLDTSENGHLDWKAPVIRER-RRFTDVMD--EEIDDERRNR 852
            +K    RP DL R     N    S          +I E  R      D  + ++ ++   
Sbjct: 308  LKYLDCRPQDLPREVLTTNPRRLS----------IIAESIRDGLATWDNWKHVNCDKLTT 357

Query: 853  INK--YGAADTYTLRRLRHEIGTRPE-AHVEADALIESRRDGHAPFFREKPITIPVVIGD 909
            I +      +    R++   +   P  AH+    L        +  + +   +  +V+ +
Sbjct: 358  IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL--------SLIWFDVIKSDVMVVVN 409

Query: 910  KLEMKCLAVGEPKPVIQWFKLGTSTL--CYLPIVIPTT-----HK---DAY--------- 950
            KL    L       V +  K  T ++   YL + +        H+   D Y         
Sbjct: 410  KLHKYSL-------VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD 462

Query: 951  -CVTSVLDGLQYLHWRGLCHL-NIEPD------NVVMASVRSVQVKLIDLG--CTQRVTK 1000
              +   LD   Y +     HL NIE         +V    R ++ K+           + 
Sbjct: 463  DLIPPYLDQ--YFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSI 520

Query: 1001 LGTLI 1005
            L TL 
Sbjct: 521  LNTLQ 525

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 58.3 bits (140), Expect = 2e-08
 Identities = 87/631 (13%), Positives = 169/631 (26%), Gaps = 226/631 (35%)

Query: 761  IDYDLNVVKSESHYQNGPDTYLLQLRDV--DFPVR-----LREYIK-------VASTRPD 806
            +D++      E  YQ   D   +       +F  +      +  +        + S    
Sbjct: 7    MDFETG----EHQYQYK-DILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61

Query: 807  LRLSTGFNCL------------DTSENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRIN 854
                  F  L            +     +  +    I+  +R    M   +  E+R+R+ 
Sbjct: 62   SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPS-MMTRMYIEQRDRL- 119

Query: 855  KYGAADTYTLRRLRHEIGTRPEAHVEA-DALIESRRDGHAPFFREKPITIPVVIGDKLEM 913
             Y     +     ++ + +R + +++   AL+E R           P    ++ G    +
Sbjct: 120  -YNDNQVFA----KYNV-SRLQPYLKLRQALLELR-----------PAKNVLIDG----V 158

Query: 914  K-----CLA--VGEPKPV-------IQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGL 959
                   +A  V     V       I W  L                       +VL+ L
Sbjct: 159  LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN----------------SPETVLEML 202

Query: 960  QYLHWRGLCHLNIEPDNVVMASVR--SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAA 1017
            Q L ++   +     D+     +R  S+Q +L  L  ++       L+            
Sbjct: 203  QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN--CLL------------ 248

Query: 1018 PEVLAEEPIFPQTDVWSAGVLAY------VLLSGASPFRGQSEPETR--QNVNFV----- 1064
              VL         +V +A           +LL+            TR  Q  +F+     
Sbjct: 249  --VLL--------NVQNAKAWNAFNLSCKILLT------------TRFKQVTDFLSAATT 286

Query: 1065 -RYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAK 1123
                 ++    LT +  + L            L   +D      +DL RE          
Sbjct: 287  THISLDHHSMTLTPDEVKSL------------LLKYLDCR---PQDLPREV--------- 322

Query: 1124 NVIGWSEKGIPSALFKTKEQAPEVLAEEPI----FPQTDVWSAGVLAYVLLSGASPFRGQ 1179
                      P  L        E + +       +   +      L  ++    S     
Sbjct: 323  ------LTTNPRRL----SIIAESIRDGLATWDNWKHVNCDK---LTTII---ESSLNVL 366

Query: 1180 SEPETRQNVNFVRYRFEYL--FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237
               E R+        F+ L  F       T  L LI                  W    +
Sbjct: 367  EPAEYRK-------MFDRLSVFPPSAHIPTILLSLI------------------WFDVIK 401

Query: 1238 Y----MIKKRERAVFLGNRLKEFSDEYHDLK-NKQFTSDSLSSLHKTLTRSNSIQEELIS 1292
                 ++ K  +   +  + KE +     +    +   ++  +LH+++    +I +   S
Sbjct: 402  SDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDS 461

Query: 1293 TAFTS-------------HLVNKPSSDSSTL 1310
                              HL N    +  TL
Sbjct: 462  DDLIPPYLDQYFYSHIGHHLKNIEHPERMTL 492

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.4 bits (135), Expect = 7e-08
 Identities = 105/727 (14%), Positives = 197/727 (27%), Gaps = 232/727 (31%)

Query: 25  HSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGR 84
           H   +  E  E++Y Y+       +        D +D  D             V+     
Sbjct: 3   HHHHMDFETGEHQYQYKDI-----LSVFEDAFVDNFDCKD-------------VQDMP-- 42

Query: 85  NYAAKVMTGKGTISHSVTVHV--EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGR 142
                    K  +S     H+    +    + R +         +K       F +E+ R
Sbjct: 43  ---------KSILSKEEIDHIIMSKDAVSGTLRLF-----WTLLSKQEEMVQKFVEEVLR 88

Query: 143 GVTGTISHSVTVHVEDNENEYSYRTYARGRQVK------------TRTKPITDAYDFGDE 190
                +     +  E  +     R Y   R               +R +P         E
Sbjct: 89  INYKFLMSP--IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLE 146

Query: 191 LGRGVTGIVYH------------AVERSSG--RNYAAKV--MT-GKGNQYKSLFKNELDI 233
           L R    ++               V  S         K+  +     N  +++    L++
Sbjct: 147 L-RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV----LEM 201

Query: 234 MNQLCHR---NLVRLHDS-----YETKDSFTIISELAGGGELLHSL-------------- 271
           + +L ++   N     D               +  L       + L              
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261

Query: 272 ----------TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL--GLTPGDL--LVAHPG 317
                     TR    T++         LS     H +S+ H    LTP ++  L+    
Sbjct: 262 FNLSCKILLTTRFKQVTDF---------LSAATTTH-ISLDHHSMTLTPDEVKSLLL--- 308

Query: 318 GRHLLLTDFGLSRRITSFGKLNPLEYDV--RYVRQALRHPWLNFADRKPTEDTPKLNTDA 375
            ++L      L R +      NP    +    +R  L   W N+           +N D 
Sbjct: 309 -KYLDCRPQDLPREVL---TTNPRRLSIIAESIRDGLAT-WDNW---------KHVNCDK 354

Query: 376 LRN-----YYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPPGTQFTPEPTPDKVLV 430
           L          L    Y     R+ + R  L          ++PP         P  +L 
Sbjct: 355 LTTIIESSLNVLEPAEY-----RKMFDR--L---------SVFPPSA-----HIPTILL- 392

Query: 431 SRDLRDVKTWEDNVPNRGPDVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLL 490
                    W D + +   DV    + +        L+    ++S  +   I   ++  L
Sbjct: 393 ------SLIWFDVIKS---DVMVVVNKLHKYS----LVEKQPKESTISIPSIYLELKVKL 439

Query: 491 SGLDYMHRLSIAH----LGLTPGDLLVAHPG-------GRHLLLTDFGLSRRITSFGKLN 539
                +HR  + H          DL+  +         G HL   +     R+T F  + 
Sbjct: 440 ENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE--HPERMTLFRMVF 497

Query: 540 PLEYGNGQYKVAVTPAMKHLQAITEAGHTPTLAQDPPPLNYSVEDSPIEWSTEPPTDKY- 598
            L++   + K+                H  T       +  +++              Y 
Sbjct: 498 -LDFRFLEQKIR---------------HDSTAWNASGSILNTLQQ----------LKFYK 531

Query: 599 QFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNL--RSLRHERIA 656
            +I +    K+  +V A              F    +  + + +++ +L   +L  E  A
Sbjct: 532 PYICDND-PKYERLVNAILD-----------FLPKIEE-NLICSKYTDLLRIALMAEDEA 578

Query: 657 SLLEAYK 663
              EA+K
Sbjct: 579 IFEEAHK 585

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 78.9 bits (195), Expect = 8e-16
 Identities = 34/156 (21%), Positives = 63/156 (40%), Gaps = 7/156 (4%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLC-H 239
           +  +   E+G G  G V+    R +G   A K M  +G   + K +   +LD++ +    
Sbjct: 25  NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILM-DLDVVLKSHDC 83

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-R 298
             +V+   ++ T     I  EL G          Q    E  +      ++  L Y+  +
Sbjct: 84  PYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             + H  + P ++L+   G   + L DFG+S R+  
Sbjct: 144 HGVIHRDVKPSNILLDERG--QIKLCDFGISGRLVD 177

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 81.1 bits (200), Expect = 1e-15
 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 9/105 (8%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            +L  L YLH  GL + +++P+N++   +   Q+KLIDLG   R+   G L     TP   
Sbjct: 191  ILPALSYLHSIGLVYNDLKPENIM---LTEEQLKLIDLGAVSRINSFGYLYG---TP--G 242

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
            F APE++   P    TD+++ G     L        G+      +
Sbjct: 243  FQAPEIVRTGPT-VATDIYTVGRTLAALTLDLPTRNGRYVDGLPE 286

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 71.8 bits (176), Expect = 8e-13
 Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 12/159 (7%)

Query: 185 YDFGDELGRGVTGIVYHAV-ERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNL 242
           Y+    +  G  G +Y A+    +GR    K +   G+   +++   E   + ++ H ++
Sbjct: 82  YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSI 141

Query: 243 VRLHDSYETKDSFT-----IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
           V++ +  E  D        I+ E  GG  L  S  ++      +   Y+ ++L  L Y+H
Sbjct: 142 VQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK--LPVAEAIAYLLEILPALSYLH 199

Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
            + + +  L P ++++       L L D G   RI SFG
Sbjct: 200 SIGLVYNDLKPENIMLTEEQ---LKLIDLGAVSRINSFG 235

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 45.2 bits (107), Expect = 1e-04
 Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1186
            QAPE++   P    TD+++ G     L        G+      +
Sbjct: 244  QAPEIVRTGPT-VATDIYTVGRTLAALTLDLPTRNGRYVDGLPE 286

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 44.1 bits (104), Expect = 3e-04
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)

Query: 483 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
             Y+ ++L  L Y+H + + +  L P ++++       L L D G   RI SFG
Sbjct: 185 IAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ---LKLIDLGAVSRINSFG 235

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 79.0 bits (195), Expect = 2e-15
 Identities = 41/189 (21%), Positives = 88/189 (46%), Gaps = 9/189 (4%)

Query: 155 HVEDNENEYSYRTYARGRQVKTRTKPIT-DAYDFGDELGRGVTGIVYHAVERSSGRNYAA 213
            +  ++    +  +A    V+ +   +  D ++    +GRG    V     + +G+ YA 
Sbjct: 32  ELAQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAM 91

Query: 214 KVM----TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLH 269
           K+M      K  +    F+ E D++     R + +LH +++ ++   ++ E   GG+LL 
Sbjct: 92  KIMNKWDMLKRGEVSC-FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLT 150

Query: 270 SLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL 328
            L++       ++A  Y+ +++  +D +HRL   H  + P ++L+   G  H+ L DFG 
Sbjct: 151 LLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCG--HIRLADFGS 208

Query: 329 SRRITSFGK 337
             ++ + G 
Sbjct: 209 CLKLRADGT 217

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 58.6 bits (142), Expect = 6e-09
 Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 15/137 (10%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--NPEF 1015
             +  +H  G  H +I+PDN+++   R   ++L D G   ++   GT+          P++
Sbjct: 174  AIDSVHRLGYVHRDIKPDNILLD--RCGHIRLADFGSCLKLRADGTVR--SLVAVGTPDY 229

Query: 1016 AAPEVLAEEPIFPQT-------DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF--VRY 1066
             +PE+L      P T       D W+ GV AY +  G +PF   S  ET   +       
Sbjct: 230  LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHL 289

Query: 1067 RFEYLFKELTQEATRFL 1083
                + + + +EA  F+
Sbjct: 290  SLPLVDEGVPEEARDFI 306

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 52.0 bits (125), Expect = 9e-07
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 463 PGGELLHSLTRQSYYTEYDIAH-YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
            GG+LL  L++       ++A  Y+ +++  +D +HRL   H  + P ++L+   G  H+
Sbjct: 144 VGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCG--HI 201

Query: 522 LLTDFGLSRRITSFGK 537
            L DFG   ++ + G 
Sbjct: 202 RLADFGSCLKLRADGT 217

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 43.5 bits (103), Expect = 3e-04
 Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 10/87 (11%)

Query: 1144 APEVLAEEPIFPQT-------DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF--VRYR 1194
            +PE+L      P T       D W+ GV AY +  G +PF   S  ET   +        
Sbjct: 231  SPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLS 290

Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKR 1221
               + + + +EA R  +      P  R
Sbjct: 291  LPLVDEGVPEEA-RDFIQRLLCPPETR 316

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} Length = 215

 Score = 75.6 bits (186), Expect = 3e-15
 Identities = 46/274 (16%), Positives = 81/274 (29%), Gaps = 73/274 (26%)

Query: 881  ADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPI 940
            + AL+      +AP  +  P+ +    G+++ + C     P   I WF+ G         
Sbjct: 7    SSALVPRGSHMYAPKLQ-GPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQ-------- 57

Query: 941  VIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---CTQR 997
            ++P+++     + +              +L + P                D G   CT  
Sbjct: 58   LLPSSNYSNIKIYNTPSA---------SYLEVTP------------DSENDFGNYNCTAV 96

Query: 998  VTKLGTLIHPIN-----TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052
              ++G            TP+            P   Q + +S+      +        G 
Sbjct: 97   -NRIGQESLEFILVQADTPSS-----------PSIDQVEPYSSTA---QVQFDEPEATGG 141

Query: 1053 SEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKR 1112
                         Y+ E+  + + +E              W             +  LK 
Sbjct: 142  VPILK--------YKAEW--RAVGEEVWH---------SKWYDAKEASMEGIVTIVGLKP 182

Query: 1113 ETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
            ET Y  RL+A N  G  E    S  FKT+    E
Sbjct: 183  ETTYAVRLAALNGKGLGEISAASE-FKTQPVQGE 215

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 78.2 bits (193), Expect = 4e-15
 Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 9/187 (4%)

Query: 156 VEDNENEYSYRTYARGRQVKTRTKPIT-DAYDFGDELGRGVTGIVYHAVERSSGRNYAAK 214
           +  N+N  ++ +  +    K R   +  + Y+    +GRG  G V     +S+ + YA K
Sbjct: 41  LRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK 100

Query: 215 VM----TGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHS 270
           ++      K +     F  E DIM       +V+L  +++      ++ E   GG+L++ 
Sbjct: 101 LLSKFEMIKRSDSAF-FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL 159

Query: 271 LTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           ++      E     Y  +++  LD +H +   H  + P ++L+   G  HL L DFG   
Sbjct: 160 MSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKLADFGTCM 216

Query: 331 RITSFGK 337
           ++   G 
Sbjct: 217 KMNKEGM 223

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 56.6 bits (137), Expect = 3e-08
 Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 11/132 (8%)

Query: 959  LQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--NPEFA 1016
            L  +H  G  H +++PDN+++   +S  +KL D G   ++ K G +    +T    P++ 
Sbjct: 181  LDAIHSMGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNKEGMV--RCDTAVGTPDYI 236

Query: 1017 APEVLAEEPIF----PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF 1072
            +PEVL  +        + D WS GV  Y +L G +PF   S   T   +   +    +  
Sbjct: 237  SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 296

Query: 1073 -KELTQEATRFL 1083
              ++++EA   +
Sbjct: 297  DNDISKEAKNLI 308

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 51.2 bits (123), Expect = 1e-06
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           PGG+L++ ++      E     Y  +++  LD +H +   H  + P ++L+   G  HL 
Sbjct: 152 PGGDLVNLMSNYDV-PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLK 208

Query: 523 LTDFGLSRRITSFGK 537
           L DFG   ++   G 
Sbjct: 209 LADFGTCMKMNKEGM 223

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 78.1 bits (193), Expect = 4e-15
 Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 7/153 (4%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           +G+G  G V    +  + + YA K M      + N+ +++F  EL IM  L H  LV L 
Sbjct: 23  IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF-KELQIMQGLEHPFLVNLW 81

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGL 306
            S++ ++   ++ +L  GG+L + L +  ++ E  +  +I +L+  LDY+    I H  +
Sbjct: 82  YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDM 141

Query: 307 TPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
            P ++L+   G  H+ +TDF ++  +    ++ 
Sbjct: 142 KPDNILLDEHG--HVHITDFNIAAMLPRETQIT 172

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 55.0 bits (133), Expect = 8e-08
 Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 17/110 (15%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN----- 1012
             L YL  + + H +++PDN+++       V + D         +  ++            
Sbjct: 127  ALDYLQNQRIIHRDMKPDNILLDE--HGHVHITDFN-------IAAMLPRETQITTMAGT 177

Query: 1013 PEFAAPEVLAEEPIFPQT---DVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
              + APE+ +       +   D WS GV AY LL G  P+  +S   +++
Sbjct: 178  KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE 227

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 53.9 bits (130), Expect = 2e-07
 Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 2/77 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG+L + L +  ++ E  +  +I +L+  LDY+    I H  + P ++L+   G  H+ 
Sbjct: 98  LGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHG--HVH 155

Query: 523 LTDFGLSRRITSFGKLN 539
           +TDF ++  +    ++ 
Sbjct: 156 ITDFNIAAMLPRETQIT 172

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 47.3 bits (113), Expect = 2e-05
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 5/82 (6%)

Query: 1144 APEVLAEEPIFPQT---DVWSAGVLAYVLLSGASPFRGQSEPETRQNV-NFVRYRFEYLF 1199
            APE+ +       +   D WS GV AY LL G  P+  +S   +++ V  F      Y  
Sbjct: 182  APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP- 240

Query: 1200 KELTQEATRFLMLIFKRAPGKR 1221
               +QE    L  + +  P +R
Sbjct: 241  SAWSQEMVSLLKKLLEPNPDQR 262

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 77.3 bits (191), Expect = 4e-15
 Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 8/183 (4%)

Query: 156 VEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKV 215
           V++   +       +       T  +   +D    LG G  G V     + SG +YA K+
Sbjct: 15  VKEFLAKAKEDFLKKWETPSQNTAQLDQ-FDRIKTLGTGSFGRVMLVKHKESGNHYAMKI 73

Query: 216 MTG----KGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSL 271
           +      K  Q +    NE  I+  +    LV+L  S++   +  ++ E   GGE+   L
Sbjct: 74  LDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132

Query: 272 TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
            R   ++E     Y  Q++   +Y+H L + +  L P +LL+   G  ++ +TDFG ++R
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQVTDFGFAKR 190

Query: 332 ITS 334
           +  
Sbjct: 191 VKG 193

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 50.7 bits (122), Expect = 2e-06
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGE+   L R   ++E     Y  Q++   +Y+H L + +  L P +LL+   G  ++ 
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 181

Query: 523 LTDFGLSRRITS 534
           +TDFG ++R+  
Sbjct: 182 VTDFGFAKRVKG 193

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 50.0 bits (120), Expect = 3e-06
 Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 36/169 (21%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRV-----TKLGTLIHPIN 1009
            ++   +YLH   L + +++P+N+++   +   +++ D G  +RV     T  GT      
Sbjct: 150  IVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWTLCGT------ 201

Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF- 1068
               PE  APE++  +      D W+ GVL Y + +G  PF      +  + +   + RF 
Sbjct: 202  ---PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258

Query: 1069 EYLFKELTQEATRFLML---------------IFKH----EVDWITLAN 1098
             +   +L       L +               I  H      DWI +  
Sbjct: 259  SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQ 307

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 77.0 bits (189), Expect = 9e-15
 Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 24/226 (10%)

Query: 853  INKYGAADTYTLRRLRHEIG-TRPEAHVEADALIESRRDGHAPFFREKPITIPVVI---- 907
                    +  +++++ E+   R    ++     +       PF   K      +I    
Sbjct: 111  PYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRL 170

Query: 908  -GDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTS-VLDGLQYLHWR 965
                + +       P+        G   L +        H     +T  V+  L  LH  
Sbjct: 171  DERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY 230

Query: 966  GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQR-----VTKLGTLIHPINTPNPEFAAPEV 1020
            GL H  + P ++V+   +   V L       R     V+ +G    P     PE  A  +
Sbjct: 231  GLVHTYLRPVDIVLD--QRGGVFLTGFEHLVRDGASAVSPIGRGFAP-----PETTAERM 283

Query: 1021 LAEEPIFPQ-----TDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            L      P       D W+ G+  Y +     P    +     + +
Sbjct: 284  LPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI 329

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 72.8 bits (178), Expect = 2e-13
 Identities = 27/183 (14%), Positives = 53/183 (28%), Gaps = 38/183 (20%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT---GKGNQYKSLFKNELDIMNQLC--- 238
              G  LG+        A ++ +G ++   V        +      K E+  +  L    
Sbjct: 80  LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 139

Query: 239 -------------------HRNLVRLHDSYETKDSFTIISE----------LAGGGELLH 269
                                   ++      +    ++S           L   GE+L 
Sbjct: 140 NQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL 199

Query: 270 SLTRQSYYTEYDIAHYI-RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL 328
           S +       +     +  Q++  L  +H   + H  L P D+++   G   + LT F  
Sbjct: 200 SHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG--GVFLTGFEH 257

Query: 329 SRR 331
             R
Sbjct: 258 LVR 260

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 50.8 bits (121), Expect = 2e-06
 Identities = 14/100 (14%), Positives = 25/100 (25%), Gaps = 17/100 (17%)

Query: 1144 APEVLAEE----------PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1193
             PE  AE            +    D W+ G+  Y +     P    +     + +    +
Sbjct: 275  PPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI----F 330

Query: 1194 RFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            R       + Q     L    +     R    +  E    
Sbjct: 331  RSCK---NIPQPVRALLEGFLRYPKEDRLLPLQAMETPEY 367

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 48.5 bits (115), Expect = 1e-05
 Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 462 GPGGELLHSLTRQSYYTEYDIAHYI-RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
              GE+L S +       +     +  Q++  L  +H   + H  L P D+++   G   
Sbjct: 192 QTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG--G 249

Query: 521 LLLTDFGLSRR 531
           + LT F    R
Sbjct: 250 VFLTGFEHLVR 260

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 75.5 bits (186), Expect = 1e-14
 Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 7/151 (4%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
            G+ LG+G  G       R +G     K +     + +  F  E+ +M  L H N+++  
Sbjct: 14  HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73

Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
                      I+E   GG L   + +  S Y       + + + SG+ Y+H ++I H  
Sbjct: 74  GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRD 133

Query: 306 LTPGDLLVAHPGGRHLLL--TDFGLSRRITS 334
           L   + LV      +  +   DFGL+R +  
Sbjct: 134 LNSHNCLV----RENKNVVVADFGLARLMVD 160

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 75.3 bits (186), Expect = 1e-14
 Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 18/163 (11%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----ELDIMNQ 236
           + + Y+   ++G G  G+V+    R +G+  A K      ++   + K     E+ ++ Q
Sbjct: 1   MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF--LESEDDPVIKKIALREIRMLKQ 58

Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSL-----TRQSYYTEYDIAHYIRQLLS 291
           L H NLV L + +  K    ++ E        H++       Q    E+ +     Q L 
Sbjct: 59  LKHPNLVNLLEVFRRKRRLHLVFEY-----CDHTVLHELDRYQRGVPEHLVKSITWQTLQ 113

Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            +++ H+ +  H  + P ++L+       + L DFG +R +T 
Sbjct: 114 AVNFCHKHNCIHRDVKPENILITKHS--VIKLCDFGFARLLTG 154

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 47.2 bits (113), Expect = 2e-05
 Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
            E+ +     Q L  +++ H+ +  H  + P ++L+       + L DFG +R +T 
Sbjct: 100 PEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHS--VIKLCDFGFARLLTG 154

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 77.5 bits (191), Expect = 1e-14
 Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 9/149 (6%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           LG+G  G V     R++G+ YA K +      K         NE  I+ ++  R +V L 
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA-LNEKQILEKVNSRFVVSLA 250

Query: 247 DSYETKDSFTIISELAGGGELLHSLTR--QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
            +YETKD+  ++  L  GG+L   +    Q+ + E     Y  ++  GL+ +HR  I + 
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310

Query: 305 GLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
            L P ++L+   G  H+ ++D GL+  + 
Sbjct: 311 DLKPENILLDDHG--HIRISDLGLAVHVP 337

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 67.1 bits (164), Expect = 2e-11
 Identities = 28/137 (20%), Positives = 59/137 (43%), Gaps = 19/137 (13%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRV------TKLGTLIHP 1007
            +  GL+ LH   + + +++P+N+++       +++ DLG             ++GT    
Sbjct: 295  ICCGLEDLHRERIVYRDLKPENILLDD--HGHIRISDLGLAVHVPEGQTIKGRVGT---- 348

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
                   + APEV+  E      D W+ G L Y +++G SPF+ + +   R+ V  +   
Sbjct: 349  -----VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE 403

Query: 1068 FEYLF-KELTQEATRFL 1083
                + +  + +A    
Sbjct: 404  VPEEYSERFSPQARSLC 420

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 57.1 bits (138), Expect = 3e-08
 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 1/79 (1%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF-KEL 1202
            APEV+  E      D W+ G L Y +++G SPF+ + +   R+ V  +       + +  
Sbjct: 353  APEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERF 412

Query: 1203 TQEATRFLMLIFKRAPGKR 1221
            + +A      +  + P +R
Sbjct: 413  SPQARSLCSQLLCKDPAER 431

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 44.8 bits (106), Expect = 2e-04
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 463 PGGELLHSLTR--QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
            GG+L   +    Q+ + E     Y  ++  GL+ +HR  I +  L P ++L+   G  H
Sbjct: 267 NGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG--H 324

Query: 521 LLLTDFGLSRRIT 533
           + ++D GL+  + 
Sbjct: 325 IRISDLGLAVHVP 337

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 77.1 bits (190), Expect = 2e-14
 Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 11/155 (7%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMT----GKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           LGRG  G V+    +++G+ YA K +      K   Y+     E  I+ ++  R +V L 
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA-MVEKKILAKVHSRFIVSLA 251

Query: 247 DSYETKDSFTIISELAGGGELLHSLT----RQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
            ++ETK    ++  +  GG++ + +         + E     Y  Q++SGL+++H+ +I 
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           +  L P ++L+   G  ++ ++D GL+  + +   
Sbjct: 312 YRDLKPENVLLDDDG--NVRISDLGLAVELKAGQT 344

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 62.9 bits (153), Expect = 4e-10
 Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 5/108 (4%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI-NTPNP 1013
            ++ GL++LH R + + +++P+NV++       V++ DLG    +    T       TP  
Sbjct: 298  IVSGLEHLHQRNIIYRDLKPENVLLDD--DGNVRISDLGLAVELKAGQTKTKGYAGTP-- 353

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
             F APE+L  E      D ++ GV  Y +++   PFR + E    + +
Sbjct: 354  GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 51.7 bits (124), Expect = 1e-06
 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 3/80 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF--KE 1201
            APE+L  E      D ++ GV  Y +++   PFR + E    + +   R   + +    +
Sbjct: 357  APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL-KQRVLEQAVTYPDK 415

Query: 1202 LTQEATRFLMLIFKRAPGKR 1221
             +  +  F   + ++ P KR
Sbjct: 416  FSPASKDFCEALLQKDPEKR 435

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 44.4 bits (105), Expect = 2e-04
 Identities = 17/79 (21%), Positives = 40/79 (50%), Gaps = 6/79 (7%)

Query: 463 PGGELLHSLT----RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG 518
            GG++ + +         + E     Y  Q++SGL+++H+ +I +  L P ++L+   G 
Sbjct: 268 NGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG- 326

Query: 519 RHLLLTDFGLSRRITSFGK 537
            ++ ++D GL+  + +   
Sbjct: 327 -NVRISDLGLAVELKAGQT 344

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 74.3 bits (183), Expect = 2e-14
 Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 19/160 (11%)

Query: 186 DFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL-------FKNELDIMNQLC 238
           ++  ++G+G  G+V+           A K +    ++ ++        F+ E+ IM+ L 
Sbjct: 22  EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL---SGLDY 295
           H N+V+L+      +   ++ E    G+L H L  ++       +  +R +L    G++Y
Sbjct: 82  HPNIVKLYGL--MHNPPRMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEY 137

Query: 296 MHRLS--IAHLGLTPGDLLVAHPGGRHLL---LTDFGLSR 330
           M   +  I H  L   ++ +        +   + DFGLS+
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 43.1 bits (102), Expect = 3e-04
 Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 11/101 (10%)

Query: 958  GLQYLHWRG--LCHLNIEPDNVVMASV---RSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
            G++Y+  +   + H ++   N+ + S+     V  K+ D G +Q+     +        N
Sbjct: 134  GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSG----LLGN 189

Query: 1013 PEFAAPEVLAEEPIF--PQTDVWSAGVLAYVLLSGASPFRG 1051
             ++ APE +  E      + D +S  ++ Y +L+G  PF  
Sbjct: 190  FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 75.9 bits (187), Expect = 2e-14
 Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 9/185 (4%)

Query: 157 EDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 216
           E N  EY         +VK       D ++    +GRG  G V     +++ + +A K++
Sbjct: 49  EKNILEYLEWAKPFTSKVKQMRLHRED-FEILKVIGRGAFGEVAVVKLKNADKVFAMKIL 107

Query: 217 TGKGNQYK----SLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLT 272
             K    K    + F+ E D++     + +  LH +++  ++  ++ +   GG+LL  L+
Sbjct: 108 N-KWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLS 166

Query: 273 RQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
           +      E     Y+ +++  +D +H+L   H  + P ++L+   G  H+ L DFG   +
Sbjct: 167 KFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG--HIRLADFGSCLK 224

Query: 332 ITSFG 336
           +   G
Sbjct: 225 LMEDG 229

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 59.8 bits (145), Expect = 4e-09
 Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 13/135 (9%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--NPEF 1015
             +  +H     H +I+PDN++M    +  ++L D G   ++ + GT+    +     P++
Sbjct: 187  AIDSVHQLHYVHRDIKPDNILMD--MNGHIRLADFGSCLKLMEDGTVQS--SVAVGTPDY 242

Query: 1016 AAPEVLAEEPIFPQT-----DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
             +PE+L              D WS GV  Y +L G +PF  +S  ET   +   + RF++
Sbjct: 243  ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF 302

Query: 1071 --LFKELTQEATRFL 1083
                 ++++ A   +
Sbjct: 303  PTQVTDVSENAKDLI 317

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 50.1 bits (120), Expect = 3e-06
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)

Query: 463 PGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
            GG+LL  L++      E     Y+ +++  +D +H+L   H  + P ++L+   G  H+
Sbjct: 157 VGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG--HI 214

Query: 522 LLTDFGLSRRITSFG 536
            L DFG   ++   G
Sbjct: 215 RLADFGSCLKLMEDG 229

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 46.7 bits (111), Expect = 4e-05
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 8/85 (9%)

Query: 1144 APEVLAEEPIFPQT-----DVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY- 1197
            +PE+L              D WS GV  Y +L G +PF  +S  ET   +   + RF++ 
Sbjct: 244  SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP 303

Query: 1198 -LFKELTQEATRFLMLIFKRAPGKR 1221
                ++++ A   +  +       R
Sbjct: 304  TQVTDVSENAKDLIRRLICSRE-HR 327

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 73.5 bits (181), Expect = 3e-14
 Identities = 38/167 (22%), Positives = 63/167 (37%), Gaps = 20/167 (11%)

Query: 186 DFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL----FKNELDIMNQLCHRN 241
              + +G G  G VY A     G   A K      ++  S      + E  +   L H N
Sbjct: 10  TLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHR- 298
           ++ L      + +  ++ E A GG L   L+ +        + A    Q+  G++Y+H  
Sbjct: 68  IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWA---VQIARGMNYLHDE 124

Query: 299 --LSIAHLGLTPGDLLVAHPGGRHLL------LTDFGLSRRITSFGK 337
             + I H  L   ++L+        L      +TDFGL+R      K
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK 171

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 49.2 bits (118), Expect = 4e-06
 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 24/125 (19%)

Query: 958  GLQYLHWRGLC---HLNIEPDNVVMASVRSVQ------VKLIDLG------CTQRVTKLG 1002
            G+ YLH   +    H +++  N+++             +K+ D G       T +++  G
Sbjct: 117  GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAG 176

Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
                        + APEV+        +DVWS GVL + LL+G  PFRG         V 
Sbjct: 177  A---------YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA 227

Query: 1063 FVRYR 1067
              +  
Sbjct: 228  MNKLA 232

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 74.2 bits (183), Expect = 4e-14
 Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 18/161 (11%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----ELDIMNQLC 238
           + Y+    +G G  G+V     + +GR  A K      +    + K     E+ ++ QL 
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKF--LESDDDKMVKKIAMREIKLLKQLR 82

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSL-----TRQSYYTEYDIAHYIRQLLSGL 293
           H NLV L +  + K  + ++ E      + H++        +      +  Y+ Q+++G+
Sbjct: 83  HENLVNLLEVCKKKKRWYLVFEF-----VDHTILDDLELFPNGLDYQVVQKYLFQIINGI 137

Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            + H  +I H  + P ++LV+  G   + L DFG +R + +
Sbjct: 138 GFCHSHNIIHRDIKPENILVSQSG--VVKLCDFGFARTLAA 176

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 47.2 bits (113), Expect = 2e-05
 Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
               +  Y+ Q+++G+ + H  +I H  + P ++LV+  G   + L DFG +R + +
Sbjct: 122 DYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG--VVKLCDFGFARTLAA 176

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 73.9 bits (182), Expect = 4e-14
 Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 11/152 (7%)

Query: 186 DFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--FKNELDIMNQLCHRNLV 243
           +  +++G G  G V+ A     G + A K++  +    + +  F  E+ IM +L H N+V
Sbjct: 40  NIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97

Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL---SGLDYMHRLS 300
               +     + +I++E    G L   L +     + D    +        G++Y+H  +
Sbjct: 98  LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157

Query: 301 --IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
             I H  L   +LLV       + + DFGLSR
Sbjct: 158 PPIVHRNLKSPNLLVDK--KYTVKVCDFGLSR 187

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 45.4 bits (108), Expect = 7e-05
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)

Query: 958  GLQYLHWRGLC--HLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
            G+ YLH R     H N++  N+++       VK+ D G   R+     L        PE+
Sbjct: 149  GMNYLHNRNPPIVHRNLKSPNLLVDK--KYTVKVCDFG-LSRLKASTFLSSKSAAGTPEW 205

Query: 1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051
             APEVL +EP   ++DV+S GV+ + L +   P+  
Sbjct: 206  MAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 73.4 bits (181), Expect = 7e-14
 Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 9/144 (6%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKG-----NQYKSLFKNELDIMNQLCHRNLVRL 245
           LG+G  G V    E+++GR YA K++  K      ++       E  ++    H  L  L
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHT-VTESRVLQNTRHPFLTAL 70

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
             +++T D    + E A GGEL   L+R+  +TE     Y  +++S L+Y+H   + +  
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLS 329
           +   +L++   G  H+ +TDFGL 
Sbjct: 131 IKLENLMLDKDG--HIKITDFGLC 152

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 63.8 bits (156), Expect = 1e-10
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 18/135 (13%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN- 1012
            ++  L+YLH R + + +I+ +N+++       +K+ D G C     K G  I    T   
Sbjct: 114  IVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKITDFGLC-----KEG--ISDGATMKT 164

Query: 1013 ----PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
                PE+ APEVL +       D W  GV+ Y ++ G  PF  Q      + +     RF
Sbjct: 165  FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224

Query: 1069 EYLFKELTQEATRFL 1083
                + L+ EA   L
Sbjct: 225  P---RTLSPEAKSLL 236

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 53.8 bits (130), Expect = 2e-07
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APEVL +       D W  GV+ Y ++ G  PF  Q      + +     RF    + L+
Sbjct: 173  APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLS 229

Query: 1204 QEATRFLMLIFKRAPGKR 1221
             EA   L  + K+ P +R
Sbjct: 230  PEAKSLLAGLLKKDPKQR 247

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 49.5 bits (119), Expect = 3e-06
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL   L+R+  +TE     Y  +++S L+Y+H   + +  +   +L++   G  H+ 
Sbjct: 88  NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIK 145

Query: 523 LTDFGLS 529
           +TDFGL 
Sbjct: 146 ITDFGLC 152

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 72.7 bits (179), Expect = 1e-13
 Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 15/162 (9%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLC-H 239
           +      E+GRG  G V   V + SG+  A K +  T    + K L   +LD++ +    
Sbjct: 22  EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLM-DLDVVMRSSDC 80

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYY------TEYDIAHYIRQLLSGL 293
             +V+ + +   +    I  EL           +  Y        E  +       +  L
Sbjct: 81  PYIVQFYGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKAL 138

Query: 294 DYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           +++   L I H  + P ++L+   G  ++ L DFG+S ++  
Sbjct: 139 NHLKENLKIIHRDIKPSNILLDRSG--NIKLCDFGISGQLVD 178

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 73.0 bits (180), Expect = 1e-13
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 40/185 (21%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD---------- 232
             Y+   ++G+G  G V+ A  R +G+  A K         K L +NE +          
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---------KVLMENEKEGFPITALREI 67

Query: 233 -IMNQLCHRNLVRLHD--------SYETKDSFTIISE-----LAGGGELLHSLTRQSYYT 278
            I+  L H N+V L +            K S  ++ +     LAG   LL ++  +  +T
Sbjct: 68  KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG---LLSNVLVK--FT 122

Query: 279 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
             +I   ++ LL+GL Y+HR  I H  +   ++L+   G   L L DFGL+R  +     
Sbjct: 123 LSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKNS 180

Query: 339 NPLEY 343
            P  Y
Sbjct: 181 QPNRY 185

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 50.3 bits (121), Expect = 2e-06
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 537
           T  +I   ++ LL+GL Y+HR  I H  +   ++L+   G   L L DFGL+R  +    
Sbjct: 122 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKN 179

Query: 538 LNPLEY 543
             P  Y
Sbjct: 180 SQPNRY 185

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 73.2 bits (180), Expect = 2e-13
 Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 8/144 (5%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVM----TGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           LG+G  G V    E+++GR YA K++        ++       E  ++    H  L  L 
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT-LTENRVLQNSRHPFLTALK 214

Query: 247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLG 305
            S++T D    + E A GGEL   L+R+  ++E     Y  +++S LDY+H   ++ +  
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 274

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLS 329
           L   +L++   G  H+ +TDFGL 
Sbjct: 275 LKLENLMLDKDG--HIKITDFGLC 296

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 59.0 bits (143), Expect = 5e-09
 Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 23/138 (16%)

Query: 955  VLDGLQYLH-WRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRV-------TKLGTLI 1005
            ++  L YLH  + + + +++ +N+++       +K+ D G C + +       T  GT  
Sbjct: 257  IVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDGATMKTFCGT-- 312

Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                   PE+ APEVL +       D W  GV+ Y ++ G  PF  Q   +  + +    
Sbjct: 313  -------PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 365

Query: 1066 YRFEYLFKELTQEATRFL 1083
             RF    + L  EA   L
Sbjct: 366  IRFP---RTLGPEAKSLL 380

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 53.2 bits (128), Expect = 4e-07
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APEVL +       D W  GV+ Y ++ G  PF  Q   +  + +     RF    + L 
Sbjct: 317  APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLG 373

Query: 1204 QEATRFLMLIFKRAPGKR 1221
             EA   L  + K+ P +R
Sbjct: 374  PEAKSLLSGLLKKDPKQR 391

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 48.2 bits (115), Expect = 1e-05
 Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHL 521
            GGEL   L+R+  ++E     Y  +++S LDY+H   ++ +  L   +L++   G  H+
Sbjct: 231 NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HI 288

Query: 522 LLTDFGLS 529
            +TDFGL 
Sbjct: 289 KITDFGLC 296

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 71.1 bits (175), Expect = 3e-13
 Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 10/153 (6%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDI-MNQLCHRNLVRL 245
            ELGRG  G+V       SG+  A K +    N    K L   +LDI M  +     V  
Sbjct: 13  MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLM-DLDISMRTVDCPFTVTF 71

Query: 246 HDSYETKDSFTIISELAGGG---ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSI 301
           + +   +    I  EL            + +     E  +      ++  L+++H +LS+
Sbjct: 72  YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            H  + P ++L+   G   + + DFG+S  +  
Sbjct: 132 IHRDVKPSNVLINALG--QVKMCDFGISGYLVD 162

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 42.2 bits (100), Expect = 6e-04
 Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 23/119 (19%)

Query: 949  AYCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCT-------QRVTK 1000
                 S++  L++LH    + H +++P NV++      QVK+ D G +        +   
Sbjct: 112  GKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN--ALGQVKMCDFGISGYLVDDVAKDID 169

Query: 1001 LGTLIHPINTPNPEFAAPEVLAEEPIFP----QTDVWSAGVLAYVLLSGASPFRGQSEP 1055
             G            + APE +  E        ++D+WS G+    L     P+     P
Sbjct: 170  AGC---------KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP 219

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 71.8 bits (177), Expect = 3e-13
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 11/147 (7%)

Query: 191 LGRGVTGIVY---HAVERSSGRNYAAKVM-----TGKGNQYKSLFKNELDIMNQLCHRNL 242
           LG+G  G V+        ++G+ +A KV+                K E +I+ ++ H  +
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT-KAERNILEEVKHPFI 83

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
           V L  +++T     +I E   GGEL   L R+  + E     Y+ ++   L ++H+  I 
Sbjct: 84  VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGII 143

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           +  L P ++++ H G  H+ LTDFGL 
Sbjct: 144 YRDLKPENIMLNHQG--HVKLTDFGLC 168

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 57.6 bits (140), Expect = 9e-09
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 22/134 (16%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTK-------LGTLIHPIN 1009
             L +LH +G+ + +++P+N+++       VKL D G C + +          GT      
Sbjct: 133  ALGHLHQKGIIYRDLKPENIMLNH--QGHVKLTDFGLCKESIHDGTVTHTFCGT------ 184

Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
                E+ APE+L         D WS G L Y +L+GA PF G++  +T   +   +    
Sbjct: 185  ---IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP 241

Query: 1070 YLFKELTQEATRFL 1083
                 LTQEA   L
Sbjct: 242  ---PYLTQEARDLL 252

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 54.1 bits (131), Expect = 1e-07
 Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE+L         D WS G L Y +L+GA PF G++  +T   +   +         LT
Sbjct: 189  APEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP---PYLT 245

Query: 1204 QEATRFLMLIFKRAPGKR 1221
            QEA   L  + KR    R
Sbjct: 246  QEARDLLKKLLKRNAASR 263

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 50.2 bits (121), Expect = 2e-06
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL   L R+  + E     Y+ ++   L ++H+  I +  L P ++++ H G  H+ 
Sbjct: 104 SGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG--HVK 161

Query: 523 LTDFGLS 529
           LTDFGL 
Sbjct: 162 LTDFGLC 168

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 71.8 bits (177), Expect = 3e-13
 Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 20/164 (12%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSLFKN----ELDIMNQL 237
             Y+  D LG G    VY A ++++ +  A K +  G  ++ K         E+ ++ +L
Sbjct: 10  KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69

Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSL-----TRQSYYTEYDIAHYIRQLLSG 292
            H N++ L D++  K + +++ +      +   L           T   I  Y+   L G
Sbjct: 70  SHPNIIGLLDAFGHKSNISLVFDF-----METDLEVIIKDNSLVLTPSHIKAYMLMTLQG 124

Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
           L+Y+H+  I H  L P +LL+   G   L L DFGL++   SFG
Sbjct: 125 LEYLHQHWILHRDLKPNNLLLDENG--VLKLADFGLAK---SFG 163

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 48.3 bits (116), Expect = 1e-05
 Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 5/65 (7%)

Query: 472 TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 531
                 T   I  Y+   L GL+Y+H+  I H  L P +LL+   G   L L DFGL++ 
Sbjct: 104 DNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG--VLKLADFGLAK- 160

Query: 532 ITSFG 536
             SFG
Sbjct: 161 --SFG 163

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 71.4 bits (176), Expect = 3e-13
 Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 7/154 (4%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTG----KGNQYKSLFKNELDIMNQLC 238
             +     LG G  G V+    R +GR YA KV+      +  Q +    +E  +++ + 
Sbjct: 6   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHT-NDERLMLSIVT 64

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H  ++R+  +++      +I +   GGEL   L +   +       Y  ++   L+Y+H 
Sbjct: 65  HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 124

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
             I +  L P ++L+   G  H+ +TDFG ++ +
Sbjct: 125 KDIIYRDLKPENILLDKNG--HIKITDFGFAKYV 156

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 48.7 bits (117), Expect = 6e-06
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL   L +   +       Y  ++   L+Y+H   I +  L P ++L+   G  H+ 
Sbjct: 89  EGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG--HIK 146

Query: 523 LTDFGLSRRI 532
           +TDFG ++ +
Sbjct: 147 ITDFGFAKYV 156

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 45.6 bits (109), Expect = 7e-05
 Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 20/121 (16%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQ--VKLIDLGCTQRVTKL-----GTLIHP 1007
            V   L+YLH + + + +++P+N+++         +K+ D G  + V  +     GT    
Sbjct: 115  VCLALEYLHSKDIIYRDLKPENILLDK----NGHIKITDFGFAKYVPDVTYTLCGT---- 166

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
                 P++ APEV++ +P     D WS G+L Y +L+G +PF   +  +T + +     R
Sbjct: 167  -----PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELR 221

Query: 1068 F 1068
            F
Sbjct: 222  F 222

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 42.5 bits (101), Expect = 7e-04
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APEV++ +P     D WS G+L Y +L+G +PF   +  +T + +     RF        
Sbjct: 171  APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP---PFFN 227

Query: 1204 QEATRFLMLIFKRAPGKR 1221
            ++    L  +  R   +R
Sbjct: 228  EDVKDLLSRLITRDLSQR 245

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 70.2 bits (173), Expect = 5e-13
 Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 34/170 (20%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD---------- 232
           + +   +++G G  G+VY A  + +G   A K         K     E +          
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---------KIRLDTETEGVPSTAIREI 53

Query: 233 -IMNQLCHRNLVRLHDSYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYI 286
            ++ +L H N+V+L D   T++   ++ E     L      + +    +      I  Y+
Sbjct: 54  SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDAS-ALTGIPLPLIKSYL 109

Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
            QLL GL + H   + H  L P +LL+   G   + L DFGL+R   +FG
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLADFGLAR---AFG 154

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 47.5 bits (114), Expect = 2e-05
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 5/59 (8%)

Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 536
               I  Y+ QLL GL + H   + H  L P +LL+   G   + L DFGL+R   +FG
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLADFGLAR---AFG 154

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 71.6 bits (175), Expect = 9e-13
 Identities = 30/149 (20%), Positives = 63/149 (42%), Gaps = 18/149 (12%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--------- 241
           LG+G  G V  +  + +   YA K++       K +   + D+   +  +          
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILK------KDVVIQDDDVECTMVEKRVLALPGKPP 402

Query: 242 -LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            L +LH  ++T D    + E   GG+L++ + +   + E     Y  ++  GL ++    
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 462

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           I +  L   ++++   G  H+ + DFG+ 
Sbjct: 463 IIYRDLKLDNVMLDSEG--HIKIADFGMC 489

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 67.4 bits (164), Expect = 2e-11
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 18/135 (13%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN- 1012
            +  GL +L  +G+ + +++ DNV++ S     +K+ D G C     K    I    T   
Sbjct: 451  IAIGLFFLQSKGIIYRDLKLDNVMLDS--EGHIKIADFGMC-----KEN--IWDGVTTKT 501

Query: 1013 ----PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
                P++ APE++A +P     D W+ GVL Y +L+G +PF G+ E E  Q++      +
Sbjct: 502  FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 561

Query: 1069 EYLFKELTQEATRFL 1083
                K +++EA    
Sbjct: 562  P---KSMSKEAVAIC 573

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 55.4 bits (133), Expect = 1e-07
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE++A +P     D W+ GVL Y +L+G +PF G+ E E  Q++      +    K ++
Sbjct: 510  APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP---KSMS 566

Query: 1204 QEATRFLMLIFKRAPGKR 1221
            +EA      +  + PGKR
Sbjct: 567  KEAVAICKGLMTKHPGKR 584

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 48.1 bits (114), Expect = 2e-05
 Identities = 14/67 (20%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG+L++ + +   + E     Y  ++  GL ++    I +  L   ++++   G  H+ 
Sbjct: 425 NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG--HIK 482

Query: 523 LTDFGLS 529
           + DFG+ 
Sbjct: 483 IADFGMC 489

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 69.5 bits (171), Expect = 1e-12
 Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 26/163 (15%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----------ELD 232
             +   ++LG G    VY  + +++G   A K         +    +          E+ 
Sbjct: 5   SQFKQLEKLGNGTYATVYKGLNKTTGVYVALK---------EVKLDSEEGTPSTAIREIS 55

Query: 233 IMNQLCHRNLVRLHDSYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYIR 287
           +M +L H N+VRL+D   T++  T++ E     L    +               + ++  
Sbjct: 56  LMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQW 115

Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           QLL GL + H   I H  L P +LL+   G   L L DFGL+R
Sbjct: 116 QLLQGLAFCHENKILHRDLKPQNLLINKRG--QLKLGDFGLAR 156

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 46.4 bits (111), Expect = 3e-05
 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 12/81 (14%)

Query: 450 DVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPG 509
           D+K + D+         L              + ++  QLL GL + H   I H  L P 
Sbjct: 88  DLKKYMDSRTVGNTPRGL----------ELNLVKYFQWQLLQGLAFCHENKILHRDLKPQ 137

Query: 510 DLLVAHPGGRHLLLTDFGLSR 530
           +LL+   G   L L DFGL+R
Sbjct: 138 NLLINKRG--QLKLGDFGLAR 156

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 68.7 bits (169), Expect = 1e-12
 Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 32/164 (19%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD---------- 232
             Y+  +++G G  G V+ A  R +    A K         +    ++ +          
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALK---------RVRLDDDDEGVPSSALREI 52

Query: 233 -IMNQLCHRNLVRLHDSYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYI 286
            ++ +L H+N+VRLHD   +    T++ E     L        S           +  ++
Sbjct: 53  CLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKK---YFDS--CNGDLDPEIVKSFL 107

Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            QLL GL + H  ++ H  L P +LL+   G   L L +FGL+R
Sbjct: 108 FQLLKGLGFCHSRNVLHRDLKPQNLLINRNG--ELKLANFGLAR 149

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 46.7 bits (112), Expect = 2e-05
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
               +  ++ QLL GL + H  ++ H  L P +LL+   G   L L +FGL+R
Sbjct: 99  DPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG--ELKLANFGLAR 149

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 69.6 bits (171), Expect = 1e-12
 Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 18/149 (12%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--------- 241
           +GRG    V     + + R YA KV+       K L  ++ DI      ++         
Sbjct: 17  IGRGSYAKVLLVRLKKTDRIYAMKVVK------KELVNDDEDIDWVQTEKHVFEQASNHP 70

Query: 242 -LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            LV LH  ++T+     + E   GG+L+  + RQ    E     Y  ++   L+Y+H   
Sbjct: 71  FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           I +  L   ++L+   G  H+ LTD+G+ 
Sbjct: 131 IIYRDLKLDNVLLDSEG--HIKLTDYGMC 157

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 60.7 bits (148), Expect = 1e-09
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 15/111 (13%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN---- 1012
             L YLH RG+ + +++ DNV++ S     +KL D G C     K G  + P +T +    
Sbjct: 122  ALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMC-----KEG--LRPGDTTSTFCG 172

Query: 1013 -PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
             P + APE+L  E      D W+ GVL + +++G SPF      +      
Sbjct: 173  TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 223

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 48.4 bits (116), Expect = 8e-06
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG+L+  + RQ    E     Y  ++   L+Y+H   I +  L   ++L+   G  H+ 
Sbjct: 93  NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIK 150

Query: 523 LTDFGLS 529
           LTD+G+ 
Sbjct: 151 LTDYGMC 157

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 48.0 bits (115), Expect = 1e-05
 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 16/89 (17%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF---- 1199
            APE+L  E      D W+ GVL + +++G SPF      +            +YLF    
Sbjct: 178  APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT-----EDYLFQVIL 232

Query: 1200 -------KELTQEATRFLMLIFKRAPGKR 1221
                   + L+ +A   L     + P +R
Sbjct: 233  EKQIRIPRSLSVKAASVLKSFLNKDPKER 261

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 69.2 bits (170), Expect = 2e-12
 Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 31/163 (19%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN----------ELD 232
           + Y   D+LG G    VY    + +    A K         +   ++          E+ 
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALK---------EIRLEHEEGAPCTAIREVS 52

Query: 233 IMNQLCHRNLVRLHDSYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYIR 287
           ++  L H N+V LHD   T+ S T++ E     L      L      +    +++  ++ 
Sbjct: 53  LLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQ---YLDD--CGNIINMHNVKLFLF 107

Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           QLL GL Y HR  + H  L P +LL+   G   L L DFGL+R
Sbjct: 108 QLLRGLAYCHRQKVLHRDLKPQNLLINERG--ELKLADFGLAR 148

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 46.4 bits (111), Expect = 3e-05
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 472 TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
              +    +++  ++ QLL GL Y HR  + H  L P +LL+   G   L L DFGL+R
Sbjct: 92  DCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERG--ELKLADFGLAR 148

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 69.2 bits (170), Expect = 2e-12
 Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 5/155 (3%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT---GKGNQYKSLFKNELDIMNQLCHRN 241
           Y     +GRG  G VY A +    R  A K+M+        +++  + E     +L   +
Sbjct: 36  YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPH 95

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +V +HD  E      +   L  G +L   L RQ           +RQ+ S LD  H    
Sbjct: 96  VVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGA 155

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG 336
            H  + P ++LV+        L DFG++   T   
Sbjct: 156 THRDVKPENILVSADD--FAYLVDFGIASATTDEK 188

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 61.5 bits (150), Expect = 5e-10
 Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 20/111 (18%)

Query: 952  VTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---------CTQRVTKLG 1002
            V  +   L   H  G  H +++P+N++++        L+D G          TQ    +G
Sbjct: 140  VRQIGSALDAAHAAGATHRDVKPENILVS--ADDFAYLVDFGIASATTDEKLTQLGNTVG 197

Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
            T           + APE  +E     + D+++   + Y  L+G+ P++G  
Sbjct: 198  T---------LYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ 239

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 69.6 bits (171), Expect = 2e-12
 Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 18/149 (12%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--------- 241
           LG+G  G V  A  + +G  YA KV+       K +   + D+   +  +          
Sbjct: 31  LGKGSFGKVMLARVKETGDLYAVKVLK------KDVILQDDDVECTMTEKRILSLARNHP 84

Query: 242 -LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            L +L   ++T D    + E   GG+L+  + +   + E     Y  +++S L ++H   
Sbjct: 85  FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKG 144

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           I +  L   ++L+ H G  H  L DFG+ 
Sbjct: 145 IIYRDLKLDNVLLDHEG--HCKLADFGMC 171

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 63.4 bits (155), Expect = 1e-10
 Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 18/135 (13%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN- 1012
            ++  L +LH +G+ + +++ DNV++        KL D G C     K G  I    T   
Sbjct: 133  IISALMFLHDKGIIYRDLKLDNVLLDH--EGHCKLADFGMC-----KEG--ICNGVTTAT 183

Query: 1013 ----PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
                P++ APE+L E    P  D W+ GVL Y +L G +PF  ++E +  + +      +
Sbjct: 184  FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY 243

Query: 1069 EYLFKELTQEATRFL 1083
                  L ++AT  L
Sbjct: 244  P---TWLHEDATGIL 255

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 52.6 bits (127), Expect = 4e-07
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE+L E    P  D W+ GVL Y +L G +PF  ++E +  + +      +      L 
Sbjct: 192  APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP---TWLH 248

Query: 1204 QEATRFLMLIFKRAPGKR 1221
            ++AT  L     + P  R
Sbjct: 249  EDATGILKSFMTKNPTMR 266

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 48.8 bits (117), Expect = 6e-06
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG+L+  + +   + E     Y  +++S L ++H   I +  L   ++L+ H G  H  
Sbjct: 107 NGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG--HCK 164

Query: 523 LTDFGLS 529
           L DFG+ 
Sbjct: 165 LADFGMC 171

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 69.7 bits (171), Expect = 2e-12
 Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 18/149 (12%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--------- 241
           +GRG    V     + + R YA +V+       K L  ++ DI      ++         
Sbjct: 60  IGRGSYAKVLLVRLKKTDRIYAMRVVK------KELVNDDEDIDWVQTEKHVFEQASNHP 113

Query: 242 -LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            LV LH  ++T+     + E   GG+L+  + RQ    E     Y  ++   L+Y+H   
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           I +  L   ++L+   G  H+ LTD+G+ 
Sbjct: 174 IIYRDLKLDNVLLDSEG--HIKLTDYGMC 200

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 60.1 bits (146), Expect = 2e-09
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 15/111 (13%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN---- 1012
             L YLH RG+ + +++ DNV++ S     +KL D G C     K G  + P +T +    
Sbjct: 165  ALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMC-----KEG--LRPGDTTSTFCG 215

Query: 1013 -PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
             P + APE+L  E      D W+ GVL + +++G SPF      +      
Sbjct: 216  TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 266

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 48.5 bits (116), Expect = 1e-05
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG+L+  + RQ    E     Y  ++   L+Y+H   I +  L   ++L+   G  H+ 
Sbjct: 136 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIK 193

Query: 523 LTDFGLS 529
           LTD+G+ 
Sbjct: 194 LTDYGMC 200

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 47.7 bits (114), Expect = 2e-05
 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 16/89 (17%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF---- 1199
            APE+L  E      D W+ GVL + +++G SPF      +            +YLF    
Sbjct: 221  APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT-----EDYLFQVIL 275

Query: 1200 -------KELTQEATRFLMLIFKRAPGKR 1221
                   + L+ +A   L     + P +R
Sbjct: 276  EKQIRIPRSLSVKAASVLKSFLNKDPKER 304

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 69.7 bits (171), Expect = 2e-12
 Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 26/197 (13%)

Query: 164 SYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY 223
           S  T       +   +P   +Y     +G G  G+VY A    SG   A K    K  Q 
Sbjct: 35  SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQD 90

Query: 224 KSLFKN-ELDIMNQLCHRNLVRLHDS-YETKDSFT-----IISELAGGGELLHSLTRQSY 276
           K  FKN EL IM +L H N+VRL    Y + +        ++ +     E ++ + R   
Sbjct: 91  KR-FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYS 147

Query: 277 Y-----TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR 331
                     +  Y+ QL   L Y+H   I H  + P +LL+  P    L L DFG ++ 
Sbjct: 148 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAK- 205

Query: 332 ITSFGKLNPLEYDVRYV 348
                +L   E +V Y+
Sbjct: 206 -----QLVRGEPNVSYI 217

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 68.8 bits (169), Expect = 3e-12
 Identities = 30/149 (20%), Positives = 63/149 (42%), Gaps = 18/149 (12%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--------- 241
           LG+G  G V  +  + +   YA K++       K +   + D+   +  +          
Sbjct: 28  LGKGSFGKVMLSERKGTDELYAVKILK------KDVVIQDDDVECTMVEKRVLALPGKPP 81

Query: 242 -LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            L +LH  ++T D    + E   GG+L++ + +   + E     Y  ++  GL ++    
Sbjct: 82  FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 141

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           I +  L   ++++   G  H+ + DFG+ 
Sbjct: 142 IIYRDLKLDNVMLDSEG--HIKIADFGMC 168

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 64.2 bits (157), Expect = 9e-11
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 18/135 (13%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN- 1012
            +  GL +L  +G+ + +++ DNV++ S     +K+ D G C     K    I    T   
Sbjct: 130  IAIGLFFLQSKGIIYRDLKLDNVMLDS--EGHIKIADFGMC-----KEN--IWDGVTTKT 180

Query: 1013 ----PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
                P++ APE++A +P     D W+ GVL Y +L+G +PF G+ E E  Q++      +
Sbjct: 181  FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 240

Query: 1069 EYLFKELTQEATRFL 1083
                K +++EA    
Sbjct: 241  P---KSMSKEAVAIC 252

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 53.8 bits (130), Expect = 2e-07
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE++A +P     D W+ GVL Y +L+G +PF G+ E E  Q++      +    K ++
Sbjct: 189  APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP---KSMS 245

Query: 1204 QEATRFLMLIFKRAPGKR 1221
            +EA      +  + PGKR
Sbjct: 246  KEAVAICKGLMTKHPGKR 263

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 47.6 bits (114), Expect = 2e-05
 Identities = 14/67 (20%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG+L++ + +   + E     Y  ++  GL ++    I +  L   ++++   G  H+ 
Sbjct: 104 NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG--HIK 161

Query: 523 LTDFGLS 529
           + DFG+ 
Sbjct: 162 IADFGMC 168

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 68.4 bits (168), Expect = 3e-12
 Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 31/163 (19%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVM-TGKGNQYKSLFKNELDIMNQLCHRN 241
               LG G  G VY  +    G       A K +      +      +E  +M  + + +
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 78

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM---- 296
           + RL        +  +I++L   G LL  +   +       + ++  Q+  G++Y+    
Sbjct: 79  VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137

Query: 297 --HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
             HR           DL     LV  P  +H+ +TDFGL++ +
Sbjct: 138 LVHR-----------DLAARNVLVKTP--QHVKITDFGLAKLL 167

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 68.4 bits (168), Expect = 3e-12
 Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 12/154 (7%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-H 239
             D Y    +LGRG    V+ A+  ++      K++       K   K E+ I+  L   
Sbjct: 34  NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK---PVKKKKIKREIKILENLRGG 90

Query: 240 RNLVRLHDSYETKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
            N++ L D  +   S T   +   +         L +    T+YDI  Y+ ++L  LDY 
Sbjct: 91  PNIITLADIVKDPVSRTPALVFEHVNN--TDFKQLYQT--LTDYDIRFYMYEILKALDYC 146

Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           H + I H  + P ++++ H   R L L D+GL+ 
Sbjct: 147 HSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 179

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 49.6 bits (119), Expect = 4e-06
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
           T+YDI  Y+ ++L  LDY H + I H  + P ++++ H   R L L D+GL+ 
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAE 179

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 68.9 bits (169), Expect = 3e-12
 Identities = 48/202 (23%), Positives = 78/202 (38%), Gaps = 30/202 (14%)

Query: 164 SYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY 223
           S  +         R++   D +      G+G  G V    E+S+G + A K    K  Q 
Sbjct: 4   SMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK----KVIQD 59

Query: 224 KSLFKNELDIMNQLC---HRNLVRLHDSYETKDS-------FTIISELAGGGELLHSLTR 273
                 EL IM  L    H N+V+L   + T            ++ E     + LH   R
Sbjct: 60  PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV--PDTLHRCCR 117

Query: 274 QSYYTEYDI--AH---YIRQLLSGLDYMHRLS--IAHLGLTPGDLLVAHPGGRHLLLTDF 326
             Y  +          ++ QL+  +  +H  S  + H  + P ++LV +     L L DF
Sbjct: 118 NYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV-NEADGTLKLCDF 176

Query: 327 GLSRRITSFGKLNPLEYDVRYV 348
           G ++      KL+P E +V Y+
Sbjct: 177 GSAK------KLSPSEPNVAYI 192

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 67.7 bits (166), Expect = 4e-12
 Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 15/150 (10%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--FKNELDIMNQLCHRNLVR 244
            G  +G G  G VY         + A K++       + L  FKNE+ ++ +  H N++ 
Sbjct: 28  VGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84

Query: 245 LHDSYETKDSFTIISELAGGG---ELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLS 300
               Y T     I+++   G      LH+   +       DIA   RQ   G+DY+H  S
Sbjct: 85  FM-GYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIA---RQTARGMDYLHAKS 140

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           I H  L   ++ +       + + DFGL+ 
Sbjct: 141 IIHRDLKSNNIFLHE--DNTVKIGDFGLAT 168

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 48.8 bits (117), Expect = 5e-06
 Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 8/104 (7%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN--PEF 1015
            G+ YLH + + H +++ +N+ +       VK+ D G         +  H     +    +
Sbjct: 132  GMDYLHAKSIIHRDLKSNNIFLHE--DNTVKIGDFG-LATEKSRWSGSHQFEQLSGSILW 188

Query: 1016 AAPEVLAEEPIFPQT---DVWSAGVLAYVLLSGASPFRGQSEPE 1056
             APEV+  +   P +   DV++ G++ Y L++G  P+   +  +
Sbjct: 189  MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 67.8 bits (166), Expect = 4e-12
 Identities = 34/155 (21%), Positives = 62/155 (40%), Gaps = 23/155 (14%)

Query: 186 DFGDELGRGVTGIVYHAVERSSGRNY----AAKVMTGKGNQYKSL--FKNELDIMNQLCH 239
           + G+ +G+G  G VYH         +    A +++  + +    L  FK E+    Q  H
Sbjct: 36  EIGELIGKGRFGQVYHGR-------WHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRH 88

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDY 295
            N+V    +  +     II+ L  G  L   +              IA   ++++ G+ Y
Sbjct: 89  ENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIA---QEIVKGMGY 145

Query: 296 MHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           +H   I H  L   ++   +     +++TDFGL  
Sbjct: 146 LHAKGILHKDLKSKNVFYDN---GKVVITDFGLFS 177

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 44.7 bits (106), Expect = 1e-04
 Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 20/111 (18%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG------CTQRVTKLGTLIHPINTP 1011
            G+ YLH +G+ H +++  NV   + +   V + D G        Q   +   L       
Sbjct: 142  GMGYLHAKGILHKDLKSKNVFYDNGK---VVITDFGLFSISGVLQAGRREDKLRIQNGWL 198

Query: 1012 NPEFAAPEVLAEEPIFPQT---------DVWSAGVLAYVLLSGASPFRGQS 1053
                 APE++ +     +          DV++ G + Y L +   PF+ Q 
Sbjct: 199  --CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP 247

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 66.8 bits (164), Expect = 1e-11
 Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 19/150 (12%)

Query: 191 LGRGVTGIVY---HAVERSSGRNYAAKVMTGKGNQYKSLF--------KNELDIMNQLCH 239
           LG+G  G V+         + + YA KV+       K+          K E DI+ ++ H
Sbjct: 32  LGQGSFGKVFLVKKISGSDARQLYAMKVLK------KATLKVRDRVRTKMERDILVEVNH 85

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
             +V+LH +++T+    +I +   GG+L   L+++  +TE D+  Y+ +L   LD++H L
Sbjct: 86  PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 145

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            I +  L P ++L+   G  H+ LTDFGLS
Sbjct: 146 GIIYRDLKPENILLDEEG--HIKLTDFGLS 173

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 57.6 bits (140), Expect = 9e-09
 Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 26/136 (19%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQ--VKLIDLG-CTQRVTK-------LGTLIHP 1007
             L +LH  G+ + +++P+N+++      +  +KL D G   + +          GT    
Sbjct: 138  ALDHLHSLGIIYRDLKPENILLDE----EGHIKLTDFGLSKESIDHEKKAYSFCGT---- 189

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
                  E+ APEV+         D WS GVL + +L+G  PF+G+   ET   +   +  
Sbjct: 190  -----VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 244

Query: 1068 FEYLFKELTQEATRFL 1083
                 + L+ EA   L
Sbjct: 245  MP---QFLSPEAQSLL 257

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 54.1 bits (131), Expect = 1e-07
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 3/78 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APEV+         D WS GVL + +L+G  PF+G+   ET   +   +       + L+
Sbjct: 194  APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP---QFLS 250

Query: 1204 QEATRFLMLIFKRAPGKR 1221
             EA   L ++FKR P  R
Sbjct: 251  PEAQSLLRMLFKRNPANR 268

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 51.0 bits (123), Expect = 1e-06
 Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG+L   L+++  +TE D+  Y+ +L   LD++H L I +  L P ++L+   G  H+ 
Sbjct: 109 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIK 166

Query: 523 LTDFGLS 529
           LTDFGLS
Sbjct: 167 LTDFGLS 173

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 66.9 bits (164), Expect = 1e-11
 Identities = 29/149 (19%), Positives = 65/149 (43%), Gaps = 18/149 (12%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN--------- 241
           LG+G  G V+ A  + + + +A K +       K +   + D+   +  +          
Sbjct: 25  LGKGSFGKVFLAEFKKTNQFFAIKALK------KDVVLMDDDVECTMVEKRVLSLAWEHP 78

Query: 242 -LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
            L  +  +++TK++   + E   GG+L++ +     +       Y  +++ GL ++H   
Sbjct: 79  FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 138

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           I +  L   ++L+   G  H+ + DFG+ 
Sbjct: 139 IVYRDLKLDNILLDKDG--HIKIADFGMC 165

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 63.8 bits (156), Expect = 1e-10
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 22/137 (16%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-CTQRVTKLGTLIHPINTPN- 1012
            ++ GLQ+LH +G+ + +++ DN+++       +K+ D G C     K    +      N 
Sbjct: 127  IILGLQFLHSKGIVYRDLKLDNILLDK--DGHIKIADFGMC-----KEN--MLGDAKTNT 177

Query: 1013 ----PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF--VRY 1066
                P++ APE+L  +      D WS GVL Y +L G SPF GQ E E   ++      Y
Sbjct: 178  FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY 237

Query: 1067 RFEYLFKELTQEATRFL 1083
                  + L +EA   L
Sbjct: 238  P-----RWLEKEAKDLL 249

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 53.4 bits (129), Expect = 2e-07
 Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 7/80 (8%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF--VRYRFEYLFKE 1201
            APE+L  +      D WS GVL Y +L G SPF GQ E E   ++      Y      + 
Sbjct: 186  APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP-----RW 240

Query: 1202 LTQEATRFLMLIFKRAPGKR 1221
            L +EA   L+ +F R P KR
Sbjct: 241  LEKEAKDLLVKLFVREPEKR 260

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 46.8 bits (112), Expect = 3e-05
 Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG+L++ +     +       Y  +++ GL ++H   I +  L   ++L+   G  H+ 
Sbjct: 101 NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG--HIK 158

Query: 523 LTDFGLS 529
           + DFG+ 
Sbjct: 159 IADFGMC 165

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 67.0 bits (164), Expect = 1e-11
 Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 26/170 (15%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
           + + Y     +G G  G V  A +  +G   A K ++         F++         EL
Sbjct: 27  VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------PFQSIIHAKRTYREL 79

Query: 232 DIMNQLCHRNLVRLHD---SYETKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHY 285
            ++  + H N++ L D      + + F    +++ L G    L+++ +    T+  +   
Sbjct: 80  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFL 137

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
           I Q+L GL Y+H   I H  L P +L V       L + DFGL+R     
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKILDFGLARHTADE 185

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 45.0 bits (107), Expect = 1e-04
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
           L+++ +    T+  +   I Q+L GL Y+H   I H  L P +L V       L + DFG
Sbjct: 120 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKILDFG 177

Query: 528 LSRRITSF 535
           L+R     
Sbjct: 178 LARHTADE 185

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 65.6 bits (161), Expect = 2e-11
 Identities = 42/164 (25%), Positives = 67/164 (40%), Gaps = 33/164 (20%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD---------- 232
           + Y   +++G G  G+VY A     G  +A K         K   + E +          
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNN-YGETFALK---------KIRLEKEDEGIPSTTIREI 51

Query: 233 -IMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSL-----TRQSYYTEYDIAHYI 286
            I+ +L H N+V+L+D   TK    ++ E      L   L       +          ++
Sbjct: 52  SILKELKHSNIVKLYDVIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFL 106

Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            QLL+G+ Y H   + H  L P +LL+   G   L + DFGL+R
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREG--ELKIADFGLAR 148

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 47.9 bits (115), Expect = 9e-06
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
                  ++ QLL+G+ Y H   + H  L P +LL+   G   L + DFGL+R
Sbjct: 98  ESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG--ELKIADFGLAR 148

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 66.1 bits (162), Expect = 2e-11
 Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 34/167 (20%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD---------- 232
           D Y    +LG G  G VY A++  +    A K         +   ++E +          
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIK---------RIRLEHEEEGVPGTAIREV 84

Query: 233 -IMNQLCHRNLVRLHDSYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYI 286
            ++ +L HRN++ L           +I E     L      +         +   I  ++
Sbjct: 85  SLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKK---YMDKNPD---VSMRVIKSFL 138

Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH---LLLTDFGLSR 330
            QL++G+++ H     H  L P +LL++         L + DFGL+R
Sbjct: 139 YQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 44.9 bits (107), Expect = 1e-04
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH---LLLTDFGLSR 530
           +   I  ++ QL++G+++ H     H  L P +LL++         L + DFGL+R
Sbjct: 130 SMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 66.8 bits (163), Expect = 2e-11
 Identities = 47/200 (23%), Positives = 76/200 (38%), Gaps = 26/200 (13%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD-------- 232
           I D Y+    +G G  G V  A ++   R  A K +         +F++ +D        
Sbjct: 51  IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKIL-------RVFEDLIDCKRILREI 103

Query: 233 -IMNQLCHRNLVRLHD-----SYETKDSFTIISELAGGGELLHSLTRQS-YYTEYDIAHY 285
            I+N+L H ++V++ D       E  D   ++ E+A        L R   Y TE  I   
Sbjct: 104 AILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD--FKKLFRTPVYLTELHIKTL 161

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDV 345
           +  LL G+ Y+H   I H  L P + LV       + + DFGL+R +      N      
Sbjct: 162 LYNLLVGVKYVHSAGILHRDLKPANCLVNQDC--SVKVCDFGLARTVDYPENGNSQLPIS 219

Query: 346 RYVRQALRHPWLNFADRKPT 365
                     + +  + K  
Sbjct: 220 PREDDMNLVTFPHTKNLKRQ 239

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 65.8 bits (161), Expect = 2e-11
 Identities = 40/148 (27%), Positives = 77/148 (52%), Gaps = 12/148 (8%)

Query: 191 LGRGVTGIVY---HAVERSSGRNYAAKVM-----TGKGNQYKSLFKNELDIMNQLCHRN- 241
           LG G  G V+         +G+ YA KV+       K    +   + E  ++  +     
Sbjct: 62  LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHT-RTERQVLEHIRQSPF 120

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           LV LH +++T+    +I +   GGEL   L+++  +TE+++  Y+ +++  L+++H+L I
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI 180

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
            +  +   ++L+   G  H++LTDFGLS
Sbjct: 181 IYRDIKLENILLDSNG--HVVLTDFGLS 206

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 50.0 bits (120), Expect = 3e-06
 Identities = 22/67 (32%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL   L+++  +TE+++  Y+ +++  L+++H+L I +  +   ++L+   G  H++
Sbjct: 142 NGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG--HVV 199

Query: 523 LTDFGLS 529
           LTDFGLS
Sbjct: 200 LTDFGLS 206

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 49.2 bits (118), Expect = 5e-06
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 18/111 (16%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQ--VKLIDLG-CTQRVTKLGTLIHPINTPN-- 1012
             L++LH  G+ + +I+ +N+++ S       V L D G       K           +  
Sbjct: 171  ALEHLHKLGIIYRDIKLENILLDS----NGHVVLTDFGLS-----KEFVADETERAYDFC 221

Query: 1013 --PEFAAPEVLAEEPIFPQTDV--WSAGVLAYVLLSGASPFRGQSEPETRQ 1059
               E+ AP+++          V  WS GVL Y LL+GASPF    E  ++ 
Sbjct: 222  GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA 272

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 45.4 bits (108), Expect = 9e-05
 Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 19/89 (21%)

Query: 1144 APEVLAEEPIFPQTDV--WSAGVLAYVLLSGASPFRGQSEPETR---------QNVNFVR 1192
            AP+++          V  WS GVL Y LL+GASPF    E  ++             + +
Sbjct: 228  APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 287

Query: 1193 YRFEYLFKELTQEATRFLMLIFKRAPGKR 1221
                     ++  A   +  +  + P KR
Sbjct: 288  E--------MSALAKDLIQRLLMKDPKKR 308

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 66.1 bits (162), Expect = 2e-11
 Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 8/144 (5%)

Query: 191 LGRGVTGIVYHAVERSSGRNYAAKVM----TGKGNQYKSLFKNELDIMNQLC-HRNLVRL 245
           +G+G  G V  A  ++    YA KV+      K  + K +  +E +++ +   H  LV L
Sbjct: 46  IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHI-MSERNVLLKNVKHPFLVGL 104

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
           H S++T D    + +   GGEL + L R+  + E     Y  ++ S L Y+H L+I +  
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRD 164

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLS 329
           L P ++L+   G  H++LTDFGL 
Sbjct: 165 LKPENILLDSQG--HIVLTDFGLC 186

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 59.2 bits (144), Expect = 3e-09
 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 26/136 (19%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQ--VKLIDLG-CTQRVTKLGTLIHPINTPN-- 1012
             L YLH   + + +++P+N+++ S    Q  + L D G C     K    I   +T +  
Sbjct: 151  ALGYLHSLNIVYRDLKPENILLDS----QGHIVLTDFGLC-----KEN--IEHNSTTSTF 199

Query: 1013 ---PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF--VRYR 1067
               PE+ APEVL ++P     D W  G + Y +L G  PF  ++  E   N+    ++ +
Sbjct: 200  CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK 259

Query: 1068 FEYLFKELTQEATRFL 1083
                   +T  A   L
Sbjct: 260  -----PNITNSARHLL 270

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 53.4 bits (129), Expect = 2e-07
 Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 7/80 (8%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF--VRYRFEYLFKE 1201
            APEVL ++P     D W  G + Y +L G  PF  ++  E   N+    ++ +       
Sbjct: 207  APEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK-----PN 261

Query: 1202 LTQEATRFLMLIFKRAPGKR 1221
            +T  A   L  + ++   KR
Sbjct: 262  ITNSARHLLEGLLQKDRTKR 281

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 47.6 bits (114), Expect = 1e-05
 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL + L R+  + E     Y  ++ S L Y+H L+I +  L P ++L+   G  H++
Sbjct: 122 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG--HIV 179

Query: 523 LTDFGLS 529
           LTDFGL 
Sbjct: 180 LTDFGLC 186

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 64.9 bits (159), Expect = 4e-11
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 33/164 (20%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD---------- 232
           + Y   +++G G  G+VY A +   GR  A K         +     E +          
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDS-QGRIVALK---------RIRLDAEDEGIPSTAIREI 70

Query: 233 -IMNQLCHRNLVRLHDSYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAHYI 286
            ++ +L H N+V L D   ++   T++ E     L     +L     ++   +  I  Y+
Sbjct: 71  SLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKK---VLDE--NKTGLQDSQIKIYL 125

Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            QLL G+ + H+  I H  L P +LL+   G   L L DFGL+R
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDG--ALKLADFGLAR 167

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 47.5 bits (114), Expect = 1e-05
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 530
            +  I  Y+ QLL G+ + H+  I H  L P +LL+   G   L L DFGL+R
Sbjct: 117 QDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG--ALKLADFGLAR 167

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 64.7 bits (158), Expect = 4e-11
 Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 19/157 (12%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVM-TGKGNQYKSLFKNELDIMNQLCHRN 241
               LG GV G V+  V    G +       KV+    G Q      + +  +  L H +
Sbjct: 17  KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 76

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           +VRL        S  ++++    G LL  +   +       + ++  Q+  G+ Y+    
Sbjct: 77  IVRLL-GLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135

Query: 301 IAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
           + H      +L     L+  P    + + DFG++  +
Sbjct: 136 MVHR-----NLAARNVLLKSP--SQVQVADFGVADLL 165

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 65.0 bits (159), Expect = 5e-11
 Identities = 43/170 (25%), Positives = 67/170 (39%), Gaps = 26/170 (15%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
           +   Y     +G G  G V  AV+  +G   A K +          F++         EL
Sbjct: 23  VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYR-------PFQSELFAKRAYREL 75

Query: 232 DIMNQLCHRNLVRLHD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHY 285
            ++  + H N++ L D      + +    F ++    G    L  L +     E  I   
Sbjct: 76  RLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTD--LGKLMKHEKLGEDRIQFL 133

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
           + Q+L GL Y+H   I H  L PG+L V       L + DFGL+R+  S 
Sbjct: 134 VYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC--ELKILDFGLARQADSE 181

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 43.1 bits (102), Expect = 4e-04
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
           L  L +     E  I   + Q+L GL Y+H   I H  L PG+L V       L + DFG
Sbjct: 116 LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC--ELKILDFG 173

Query: 528 LSRRITSF 535
           L+R+  S 
Sbjct: 174 LARQADSE 181

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 64.7 bits (158), Expect = 5e-11
 Identities = 33/158 (20%), Positives = 60/158 (37%), Gaps = 20/158 (12%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYKSLFKNELDIMNQLCHRN 241
              +LG G  G V       +       V         G Q++S +K E+DI+  L H +
Sbjct: 35  KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEH 94

Query: 242 LVRLHD--SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           +++           S  ++ E    G L   L  +       +  + +Q+  G+ Y+H  
Sbjct: 95  IIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQ 153

Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
              H      DL     L+ +   R + + DFGL++ +
Sbjct: 154 HYIHR-----DLAARNVLLDN--DRLVKIGDFGLAKAV 184

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 64.3 bits (157), Expect = 7e-11
 Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 31/163 (19%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVM-TGKGNQYKSLFKNELDIMNQLCHRN 241
               LG G  G VY  +    G       A K +      +      +E  +M  + + +
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 78

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM---- 296
           + RL        +  +I++L   G LL  +   +       + ++  Q+  G++Y+    
Sbjct: 79  VCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137

Query: 297 --HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
             HR           DL     LV  P  +H+ +TDFGL++ +
Sbjct: 138 LVHR-----------DLAARNVLVKTP--QHVKITDFGLAKLL 167

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 64.8 bits (158), Expect = 8e-11
 Identities = 35/181 (19%), Positives = 73/181 (40%), Gaps = 23/181 (12%)

Query: 168 YARGRQVKTRTKPITDAYDF-GDELGRGVTGIVYHAVERS--SGRNYAAKVMTGKGNQYK 224
           Y    ++ +  + + D +++ G ++GRG  G VY A  +     ++YA K + G G    
Sbjct: 5   YDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMS 64

Query: 225 SLFKNELDIMNQLCHRNLVRLHD--SYETKDSFTIISE-----LAGGGELLHSL------ 271
           +    E+ ++ +L H N++ L             ++ +     L     ++         
Sbjct: 65  AC--REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWH---IIKFHRASKAN 119

Query: 272 TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH--LLLTDFGLS 329
            +        +   + Q+L G+ Y+H   + H  L P ++LV   G     + + D G +
Sbjct: 120 KKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 179

Query: 330 R 330
           R
Sbjct: 180 R 180

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 44.4 bits (105), Expect = 2e-04
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 9/79 (11%)

Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH--LLLTDFGLSRRITSF 535
               +   + Q+L G+ Y+H   + H  L P ++LV   G     + + D G +R    F
Sbjct: 126 PRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR---LF 182

Query: 536 GKLNPLE-YGNGQYKVAVT 553
              +PL+   +    V VT
Sbjct: 183 N--SPLKPLADLDPVV-VT 198

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 64.7 bits (158), Expect = 8e-11
 Identities = 52/205 (25%), Positives = 80/205 (39%), Gaps = 35/205 (17%)

Query: 158 DNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAA--KV 215
           D+ N+      + G+      +    AY     +G G  G+V+ A    S     A  KV
Sbjct: 19  DDPNKVIKVLASDGKT----GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE--VAIKKV 72

Query: 216 MTGKGNQYKSLFKN-ELDIMNQLCHRNLVRLHDSYETKDSFT------IISELAGGGELL 268
           +  K       FKN EL IM  + H N+V L   + +           ++ E     E +
Sbjct: 73  LQDK------RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP--ETV 124

Query: 269 HSLTRQS-----YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 323
           +  +R             I  Y+ QLL  L Y+H + I H  + P +LL+  P    L L
Sbjct: 125 YRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL-DPPSGVLKL 183

Query: 324 TDFGLSRRITSFGKLNPLEYDVRYV 348
            DFG ++       L   E +V Y+
Sbjct: 184 IDFGSAK------ILIAGEPNVSYI 202

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 63.8 bits (156), Expect = 8e-11
 Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 5/153 (3%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT---GKGNQYKSLFKNELDIMNQLCHRN 241
           Y   D+LG G    VY A +       A K +     +  +    F+ E+   +QL H+N
Sbjct: 13  YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +V + D  E  D + ++ E   G  L   +      +     ++  Q+L G+ + H + I
Sbjct: 73  IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRI 132

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            H  + P ++L+       L + DFG+++ ++ 
Sbjct: 133 VHRDIKPQNILIDSNK--TLKIFDFGIAKALSE 163

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 54.2 bits (131), Expect = 9e-08
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 20/108 (18%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG---------CTQRVTKLGTLI 1005
            +LDG+++ H   + H +I+P N+++    +  +K+ D G          TQ    LGT  
Sbjct: 120  ILDGIKHAHDMRIVHRDIKPQNILID--SNKTLKIFDFGIAKALSETSLTQTNHVLGT-- 175

Query: 1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
                    ++ +PE    E     TD++S G++ Y +L G  PF G++
Sbjct: 176  -------VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 63.5 bits (155), Expect = 9e-11
 Identities = 36/159 (22%), Positives = 58/159 (36%), Gaps = 20/159 (12%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKV-----MTGKGNQYKSLFKNELDIMNQLCHRN 241
              +LG G  G V        G N   +V         G  + +  K E++I+  L H N
Sbjct: 25  RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHEN 84

Query: 242 LVRLHD--SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           +V+     + +  +   +I E    G L   L   ++         Y  Q+  G+DY+  
Sbjct: 85  IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 144

Query: 299 LSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
               H      DL     LV       + + DFGL++ I
Sbjct: 145 RQYVHR-----DLAARNVLVESE--HQVKIGDFGLTKAI 176

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 62.6 bits (153), Expect = 1e-10
 Identities = 24/163 (14%), Positives = 56/163 (34%), Gaps = 18/163 (11%)

Query: 186 DFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL--FKNELDIMNQLCHRNLV 243
           +F  +L    +G ++    +  G +   KV+  +    +    F  E   +    H N++
Sbjct: 13  NFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVL 70

Query: 244 RL----HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL---SGLDYM 296
            +              T+I+     G L + L   + +   D +  ++  L    G+ ++
Sbjct: 71  PVLGACQSPPAPH--PTLITHWMPYGSLYNVLHEGTNFV-VDQSQAVKFALDMARGMAFL 127

Query: 297 HRLS--IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           H L   I    L    +++         ++   +     S G+
Sbjct: 128 HTLEPLIPRHALNSRSVMID--EDMTARISMADVKFSFQSPGR 168

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 47.6 bits (114), Expect = 1e-05
 Identities = 20/102 (19%), Positives = 43/102 (42%), Gaps = 15/102 (14%)

Query: 958  GLQYLHWRG--LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVT-KLGTLIHPINTPNPE 1014
            G+ +LH     +    +   +V++    + ++ + D+  + +   ++           P 
Sbjct: 123  GMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYA---------PA 173

Query: 1015 FAAPEVLAEEPIFPQT---DVWSAGVLAYVLLSGASPFRGQS 1053
            + APE L ++P        D+WS  VL + L++   PF   S
Sbjct: 174  WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS 215

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 63.4 bits (155), Expect = 1e-10
 Identities = 47/179 (26%), Positives = 68/179 (37%), Gaps = 29/179 (16%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAK-VMTGKGNQYKSLFKN----ELDIMNQL 237
             Y+   E+G G  G VY A +  SG   A K V    G             E+ ++ +L
Sbjct: 9   SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68

Query: 238 ---CHRNLVRLHD-----SYETKDSFTIISE-----LAGGGELLHSLTRQSYYTEYDIAH 284
               H N+VRL D       + +   T++ E     L      L             I  
Sbjct: 69  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRT---YLDKA-PPPGLPAETIKD 124

Query: 285 YIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEY 343
            +RQ L GLD++H   I H  L P ++LV   G   + L DFGL+R    +     +  
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGG--TVKLADFGLAR---IYSY--QMAL 176

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 47.2 bits (113), Expect = 2e-05
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 473 RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
                    I   +RQ L GLD++H   I H  L P ++LV   G   + L DFGL+R  
Sbjct: 113 PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG--TVKLADFGLAR-- 168

Query: 533 TSFGKLNPLEY 543
             +     +  
Sbjct: 169 -IYSY--QMAL 176

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 63.5 bits (155), Expect = 1e-10
 Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 27/170 (15%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
           +   Y     +G G  G V  A+++ SG   A K ++         F++         EL
Sbjct: 22  LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-------RPFQSEIFAKRAYREL 74

Query: 232 DIMNQLCHRNLVRLHD---SYETKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHY 285
            ++  + H N++ L D      +  +F    ++         L  +    + +E  I + 
Sbjct: 75  LLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLKF-SEEKIQYL 131

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
           + Q+L GL Y+H   + H  L PG+L V       L + DFGL+R   + 
Sbjct: 132 VYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC--ELKILDFGLARHADAE 179

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 62.7 bits (153), Expect = 2e-10
 Identities = 42/195 (21%), Positives = 73/195 (37%), Gaps = 38/195 (19%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
           +   Y     LG G  G+V+ AV+    +  A K         K +  +         E+
Sbjct: 9   LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK---------KIVLTDPQSVKHALREI 59

Query: 232 DIMNQLCHRNLVRLHD-----------SYETKDSFT---IISELAGGGELLHSLTRQSYY 277
            I+ +L H N+V++ +              +        I+ E       L ++  Q   
Sbjct: 60  KIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPL 117

Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
            E     ++ QLL GL Y+H  ++ H  L P +L + +     L + DFGL+R +     
Sbjct: 118 LEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFI-NTEDLVLKIGDFGLARIMDPHYS 176

Query: 338 LNPL--EYDV-RYVR 349
                 E  V ++ R
Sbjct: 177 HKGHLSEGLVTKWYR 191

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 62.3 bits (152), Expect = 2e-10
 Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 29/160 (18%)

Query: 190 ELGRGVTGIVYHAVERSSGRNY--AAKVM--TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
           ELG G  G V     +        A K++         K     E ++M QL +  +VR+
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM------HRL 299
                  +S+ ++ E+A  G L   L +  +  + +I   + Q+  G+ Y+      HR 
Sbjct: 84  I-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR- 141

Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRITS 334
                     DL     L+      +  ++DFGLS+ + +
Sbjct: 142 ----------DLAARNVLLVTQH--YAKISDFGLSKALRA 169

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 62.4 bits (152), Expect = 2e-10
 Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 19/158 (12%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
           +  +LG+G  G V        G N     A K +   G   +  F+ E+ I+  L    +
Sbjct: 27  YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86

Query: 243 VRLHD--SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           V+         + S  ++ E    G L   L   ++      +  Y  Q+  G++Y+   
Sbjct: 87  VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 146

Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
              H      DL     LV      H+ + DFGL++ +
Sbjct: 147 RCVHR-----DLAARNILVESE--AHVKIADFGLAKLL 177

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 63.7 bits (155), Expect = 3e-10
 Identities = 40/151 (26%), Positives = 60/151 (39%), Gaps = 8/151 (5%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
            G  +G G  G V+  +  S        A K       +  +  F  E   M Q  H ++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           V+L     T++   II EL   GEL   L  R+       +  Y  QL + L Y+     
Sbjct: 454 VKLI-GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
            H  +   ++LV+      + L DFGLSR +
Sbjct: 513 VHRDIAARNVLVSSN--DCVKLGDFGLSRYM 541

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 62.7 bits (153), Expect = 3e-10
 Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 14/153 (9%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRL 245
            G+++GRG  G V+    R+     A K          K+ F  E  I+ Q  H N+VRL
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177

Query: 246 HDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
                 K    I+ EL  GG+ L  L T  +      +   +    +G++Y+      H 
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR 237

Query: 305 GLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
                DL     LV       L ++DFG+SR  
Sbjct: 238 -----DLAARNCLVTE--KNVLKISDFGMSREE 263

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 61.5 bits (150), Expect = 4e-10
 Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 24/167 (14%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY-------AAKVMTGKGNQYKSLFKNELDIMNQLCH 239
           F + LG+G    ++  V R  G            KV+      Y   F     +M++L H
Sbjct: 12  FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           ++LV  +      D   ++ E    G L   L   ++           +QL + + ++  
Sbjct: 72  KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE 131

Query: 299 LSIAHLGLTPGDL-----LVAHPGGRHLL------LTDFGLSRRITS 334
            ++ H     G++     L+     R         L+D G+S  +  
Sbjct: 132 NTLIH-----GNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 62.6 bits (152), Expect = 4e-10
 Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 27/169 (15%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
           +   Y     +G G  GIV  A +    RN A K ++         F+N         EL
Sbjct: 60  VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-------PFQNQTHAKRAYREL 112

Query: 232 DIMNQLCHRNLVRLHD------SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHY 285
            +M  + H+N++ L +      + E      ++ EL      L  + +        +++ 
Sbjct: 113 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMEL-DHERMSYL 169

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           + Q+L G+ ++H   I H  L P +++V       L + DFGL+R   +
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGT 216

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 61.9 bits (151), Expect = 4e-10
 Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 26/178 (14%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
           I+  +     LG G  G+V  A  + +G   A K +          F           E+
Sbjct: 9   ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--------EPFDKPLFALRTLREI 60

Query: 232 DIMNQLCHRNLVRLHDSY--ETKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHYI 286
            I+    H N++ + +    ++ ++F    II EL      LH +      ++  I ++I
Sbjct: 61  KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFI 118

Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYD 344
            Q L  +  +H  ++ H  L P +LL+       L + DFGL+R I      N     
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNC--DLKVCDFGLARIIDESAADNSEPTG 174

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 61.1 bits (149), Expect = 5e-10
 Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 29/160 (18%)

Query: 190 ELGRGVTGIVYHAVERSSGRNY--AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           ELG G  G V   V R   +    A KV+  G           E  IM+QL +  +VRL 
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76

Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM------HRL 299
                 ++  ++ E+AGGG L   L  ++      ++A  + Q+  G+ Y+      HR 
Sbjct: 77  -GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR- 134

Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRITS 334
                     DL     L+ +    +  ++DFGLS+ + +
Sbjct: 135 ----------DLAARNVLLVNR--HYAKISDFGLSKALGA 162

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 61.1 bits (149), Expect = 5e-10
 Identities = 42/162 (25%), Positives = 60/162 (37%), Gaps = 30/162 (18%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
            G  +G G  G V+  +  S        A K       +  +  F  E   M Q  H ++
Sbjct: 19  LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 78

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM----- 296
           V+L     T++   II EL   GEL   L  R+       +  Y  QL + L Y+     
Sbjct: 79  VKLI-GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 137

Query: 297 -HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
            HR           D+     LV+      + L DFGLSR +
Sbjct: 138 VHR-----------DIAARNVLVSSN--DCVKLGDFGLSRYM 166

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 61.4 bits (149), Expect = 6e-10
 Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 28/177 (15%)

Query: 186 DFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMN--QLCHRNLV 243
              + +GRG  G VY        R  A KV +      +  F NE +I     + H N+ 
Sbjct: 16  KLLELIGRGRYGAVYKGSLD--ERPVAVKVFS---FANRQNFINEKNIYRVPLMEHDNIA 70

Query: 244 RL-----HDSYETKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYM 296
           R        + + +  + ++ E    G L   L+     + +   +AH    +  GL Y+
Sbjct: 71  RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAH---SVTRGLAYL 127

Query: 297 H---------RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYD 344
           H         + +I+H  L   ++LV + G    +++DFGLS R+T    + P E D
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDG--TCVISDFGLSMRLTGNRLVRPGEED 182

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 61.5 bits (150), Expect = 6e-10
 Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 11/153 (7%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
               +G G +G V +   R  G+     A K +  G   + +  F +E  IM Q  H N+
Sbjct: 53  IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +RL           I++E    G L   L T    +T   +   +R + +G+ Y+  L  
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172

Query: 302 AHLGLTPGDLLVAHPGGRHLL--LTDFGLSRRI 332
            H  L   ++LV      +L+  ++DFGLSR +
Sbjct: 173 VHRDLAARNVLV----DSNLVCKVSDFGLSRVL 201

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 60.7 bits (148), Expect = 6e-10
 Identities = 45/162 (27%), Positives = 60/162 (37%), Gaps = 30/162 (18%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
               LG G  G VY  V  +        A K          K  F +E  IM  L H ++
Sbjct: 16  LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM----- 296
           V+L      ++   II EL   GEL H L   ++      +  Y  Q+   + Y+     
Sbjct: 76  VKLI-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC 134

Query: 297 -HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
            HR           D+     LVA P    + L DFGLSR I
Sbjct: 135 VHR-----------DIAVRNILVASP--ECVKLGDFGLSRYI 163

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 61.3 bits (149), Expect = 6e-10
 Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 22/163 (13%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI--MNQLCHRNLVR 244
             + +G+G  G V+    R  G   A K+ +   ++ +  +  E +I     L H N++ 
Sbjct: 46  LQESIGKGRFGEVWRGKWR--GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILG 100

Query: 245 LHDSYETKDSFT----IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH--- 297
              +    +       ++S+    G L   L R +  T   +        SGL ++H   
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEI 159

Query: 298 -----RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
                + +IAH  L   ++LV   G     + D GL+ R  S 
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDSA 200

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 60.7 bits (148), Expect = 7e-10
 Identities = 40/164 (24%), Positives = 65/164 (39%), Gaps = 32/164 (19%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM---TGKGNQYKSLFKNELDIMNQLCHR 240
             ++LG G  G+V      +        A K +        +    F  E++ M+ L HR
Sbjct: 22  LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM--- 296
           NL+RL+          +++ELA  G LL  L   Q ++    ++ Y  Q+  G+ Y+   
Sbjct: 82  NLIRLY-GVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 140

Query: 297 ---HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
              HR           DL     L+A      + + DFGL R +
Sbjct: 141 RFIHR-----------DLAARNLLLATR--DLVKIGDFGLMRAL 171

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 61.1 bits (149), Expect = 7e-10
 Identities = 42/186 (22%), Positives = 68/186 (36%), Gaps = 45/186 (24%)

Query: 183 DAYDFGDELGRGVTGIVYHAVE-RSSGRNYAAKVMTGKGNQYKSLFKNE----------- 230
             Y+   E+G G  G V+ A + ++ GR  A K         +   +             
Sbjct: 11  QQYECVAEIGEGAYGKVFKARDLKNGGRFVALK---------RVRVQTGEEGMPLSTIRE 61

Query: 231 ---LDIMNQLCHRNLVRLHD-----SYETKDSFTIISE-----LAGGGELLHSLTRQSYY 277
              L  +    H N+VRL D       + +   T++ E     L      L  +  +   
Sbjct: 62  VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT---YLDKV-PEPGV 117

Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
               I   + QLL GLD++H   + H  L P ++LV   G   + L DFGL+R    +  
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLAR---IYS- 171

Query: 338 LNPLEY 343
              +  
Sbjct: 172 -FQMAL 176

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 48.4 bits (116), Expect = 9e-06
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 7/71 (9%)

Query: 473 RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 532
            +       I   + QLL GLD++H   + H  L P ++LV   G   + L DFGL+R  
Sbjct: 113 PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLAR-- 168

Query: 533 TSFGKLNPLEY 543
             +     +  
Sbjct: 169 -IYS--FQMAL 176

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 61.7 bits (150), Expect = 7e-10
 Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 26/169 (15%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
           + D Y     +GRG  G VY A ++++ +N A K +         +F++         E+
Sbjct: 24  VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVN-------RMFEDLIDCKRILREI 76

Query: 232 DIMNQLCHRNLVRLHDSY--ETKDSFT---IISELAGGGELLHSLTRQSYY-TEYDIAHY 285
            I+N+L    ++RL+D    +    F    I+ E+A     L  L +   + TE  I   
Sbjct: 77  TILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSD--LKKLFKTPIFLTEEHIKTI 134

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           +  LL G +++H   I H  L P + L+       + + DFGL+R I S
Sbjct: 135 LYNLLLGENFIHESGIIHRDLKPANCLLNQDC--SVKVCDFGLARTINS 181

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 60.8 bits (148), Expect = 8e-10
 Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 19/158 (12%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
           F  +LG+G  G V          N     A K +     ++   F+ E++I+  L H N+
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73

Query: 243 VRLHD--SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           V+         + +  +I E    G L   L   +       +  Y  Q+  G++Y+   
Sbjct: 74  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 133

Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
              H      DL     LV +     + + DFGL++ +
Sbjct: 134 RYIHR-----DLATRNILVENE--NRVKIGDFGLTKVL 164

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 61.2 bits (149), Expect = 8e-10
 Identities = 34/172 (19%), Positives = 69/172 (40%), Gaps = 23/172 (13%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAK--VMTGKGNQYKSLFKN--------- 229
           +   Y     +  G  G V   V+   G   A K    T    +  ++  +         
Sbjct: 20  MQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78

Query: 230 ELDIMNQLCHRNLVRLHDSY--ETKDSFT---IISELAGGGELLHSL--TRQSYYTEYDI 282
           E+ ++N   H N++ L D +    + +     +++EL      L  +   ++   +   I
Sbjct: 79  EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD--LAQVIHDQRIVISPQHI 136

Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            +++  +L GL  +H   + H  L PG++L+A      + + DF L+R  T+
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN--DITICDFNLAREDTA 186

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 61.1 bits (149), Expect = 8e-10
 Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 29/186 (15%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
           +   Y     +G G  G+V  A +  +    A K +        S F++         E+
Sbjct: 25  VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--------SPFEHQTYCQRTLREI 76

Query: 232 DIMNQLCHRNLVRLHDSY--ETKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHYI 286
            I+ +  H N++ ++D     T +      I+ +L      L+ L +  + +   I +++
Sbjct: 77  KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFL 134

Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPL--EYD 344
            Q+L GL Y+H  ++ H  L P +LL+       L + DFGL+R             EY 
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTEYV 192

Query: 345 V-RYVR 349
             R+ R
Sbjct: 193 ATRWYR 198

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 60.1 bits (146), Expect = 1e-09
 Identities = 21/152 (13%), Positives = 47/152 (30%), Gaps = 7/152 (4%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---TGKGNQYKSLFKNELDIMNQLCHRN 241
           Y      G       + A++ +  R  A   +       +       +    ++++    
Sbjct: 33  YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPG 92

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           + R+ D   T+    +++E   GG L          +       ++ L +  D  HR  +
Sbjct: 93  VARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSP--SPVGAIRAMQSLAAAADAAHRAGV 150

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
           A     P  + V+  G   ++L          
Sbjct: 151 ALSIDHPSRVRVSIDG--DVVLAYPATMPDAN 180

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 50.9 bits (122), Expect = 1e-06
 Identities = 16/115 (13%), Positives = 23/115 (20%), Gaps = 30/115 (26%)

Query: 943  PTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG 1002
            P+       + S+       H  G+      P  V ++      V L             
Sbjct: 126  PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSI--DGDVVLAYPATMPDAN--- 180

Query: 1003 TLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057
                                     PQ D+   G   Y LL    P         
Sbjct: 181  -------------------------PQDDIRGIGASLYALLVNRWPLPEAGVRSG 210

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 60.5 bits (147), Expect = 1e-09
 Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 19/158 (12%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
           F  +LG+G  G V          N     A K +     ++   F+ E++I+  L H N+
Sbjct: 45  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104

Query: 243 VRLHD--SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           V+         + +  +I E    G L   L   +       +  Y  Q+  G++Y+   
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 164

Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
              H      DL     LV +     + + DFGL++ +
Sbjct: 165 RYIHR-----DLATRNILVENE--NRVKIGDFGLTKVL 195

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 61.5 bits (149), Expect = 1e-09
 Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 29/160 (18%)

Query: 190 ELGRGVTGIVYHAVERSSGRNY--AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           ELG G  G V   V R   +    A KV+  G           E  IM+QL +  +VRL 
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402

Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM------HRL 299
                 ++  ++ E+AGGG L   L  ++      ++A  + Q+  G+ Y+      HR 
Sbjct: 403 -GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR- 460

Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRITS 334
                     +L     L+ +    +  ++DFGLS+ + +
Sbjct: 461 ----------NLAARNVLLVNR--HYAKISDFGLSKALGA 488

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 60.1 bits (146), Expect = 2e-09
 Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 11/155 (7%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
               +G G  G V     +   +     A K +  G   + +  F  E  IM Q  H N+
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           +RL           I++E    G L   L    + +T   +   +R + SG+ Y+  +  
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168

Query: 302 AHLGLTPGDLLVAHPGGRHLL--LTDFGLSRRITS 334
            H  L   ++L+      +L+  ++DFGL R +  
Sbjct: 169 VHRDLAARNILI----NSNLVCKVSDFGLGRVLED 199

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 60.6 bits (147), Expect = 2e-09
 Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 9/150 (6%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
              +LG G  G VY  V +      A K +  +       F  E  +M ++ H NLV+L 
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLL 282

Query: 247 DSYETKDSFTIISELAGGGELLHSL--TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
                +  F II+E    G LL  L    +   +   + +   Q+ S ++Y+ + +  H 
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342

Query: 305 GLTPGDLLVAHPGGRHLL--LTDFGLSRRI 332
            L   + LV    G + L  + DFGLSR +
Sbjct: 343 NLAARNCLV----GENHLVKVADFGLSRLM 368

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 59.7 bits (145), Expect = 2e-09
 Identities = 50/211 (23%), Positives = 71/211 (33%), Gaps = 54/211 (25%)

Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN-ELDIMNQLC 238
             +  Y  G  LG G  GIV    +  SG+ +A K    K  Q    +KN ELDIM  L 
Sbjct: 4   TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALK----KVLQDPR-YKNRELDIMKVLD 58

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD----------------- 281
           H N+++L D + T                            +                  
Sbjct: 59  HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIME 118

Query: 282 ---------IAHYIR---------------QLLSGLDYMHRLSIAHLGLTPGDLLVAHPG 317
                    +  +IR               QL   + ++H L I H  + P +LLV +  
Sbjct: 119 YVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV-NSK 177

Query: 318 GRHLLLTDFGLSRRITSFGKLNPLEYDVRYV 348
              L L DFG ++      KL P E  V Y+
Sbjct: 178 DNTLKLCDFGSAK------KLIPSEPSVAYI 202

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 58.4 bits (142), Expect = 3e-09
 Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 31/162 (19%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           F  E+G G  G+V+     +  +  A K +  +G   +  F  E ++M +L H  LV+L+
Sbjct: 12  FVQEIGSGQFGLVHLGYWLNKDK-VAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLY 69

Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM------HRL 299
                +    +++E    G L   L T++  +    +      +  G+ Y+      HR 
Sbjct: 70  GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR- 128

Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLL--LTDFGLSRRITS 334
                     DL     LV    G + +  ++DFG++R +  
Sbjct: 129 ----------DLAARNCLV----GENQVIKVSDFGMTRFVLD 156

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 59.3 bits (144), Expect = 3e-09
 Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 27/169 (15%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
           +   Y     +G G  GIV  A +    RN A K ++         F+N         EL
Sbjct: 23  VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-------PFQNQTHAKRAYREL 75

Query: 232 DIMNQLCHRNLVRLHD---SYETKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHY 285
            +M  + H+N++ L +     ++ + F    I+ EL      L  + +        +++ 
Sbjct: 76  VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMEL-DHERMSYL 132

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           + Q+L G+ ++H   I H  L P +++V       L + DFGL+R   +
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAGT 179

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 58.8 bits (143), Expect = 4e-09
 Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 9/157 (5%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---TGKGNQYKSLFKNELDIMNQLCHRN 241
           Y+ G+ LG G    V+ A +    R+ A KV+     +   +   F+ E      L H  
Sbjct: 14  YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73

Query: 242 LVRLHDSYETKDSFT----IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
           +V ++D+ E +        I+ E   G  L   +  +   T       I      L++ H
Sbjct: 74  IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133

Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           +  I H  + P +++++      + + DFG++R I  
Sbjct: 134 QNGIIHRDVKPANIMISATN--AVKVMDFGIARAIAD 168

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 52.6 bits (127), Expect = 4e-07
 Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 22/110 (20%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG-----------CTQRVTKLGT 1003
                L + H  G+ H +++P N++++   +  VK++D G            TQ    +GT
Sbjct: 125  ACQALNFSHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182

Query: 1004 LIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053
                      ++ +PE    + +  ++DV+S G + Y +L+G  PF G S
Sbjct: 183  ---------AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 59.0 bits (143), Expect = 4e-09
 Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 22/162 (13%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI--MNQLCHRNLVR 244
              ++G+G  G V+    R  G   A KV        ++ +  E +I     + H N++ 
Sbjct: 41  MVKQIGKGRYGEVWMGKWR--GEKVAVKVFF---TTEEASWFRETEIYQTVLMRHENILG 95

Query: 245 L----HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH--- 297
                     +     +I++    G L   L   +      +       +SGL ++H   
Sbjct: 96  FIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-LDAKSMLKLAYSSVSGLCHLHTEI 154

Query: 298 -----RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
                + +IAH  L   ++LV   G     + D GL+ +  S
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVKFIS 194

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 58.9 bits (143), Expect = 4e-09
 Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 17/178 (9%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY----AAKVM-TGKGNQYKSLFKNELDIMNQLCHRN 241
               +G G  G VY  + ++S        A K +  G   + +  F  E  IM Q  H N
Sbjct: 48  RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           ++RL           II+E    G L   L  +   ++   +   +R + +G+ Y+  ++
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRHP--W 356
             H  L   ++LV         ++DFGLSR +         + +  Y     + P  W
Sbjct: 168 YVHRDLAARNILVNSN--LVCKVSDFGLSRVLED-------DPEATYTTSGGKIPIRW 216

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 58.1 bits (141), Expect = 5e-09
 Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 26/174 (14%)

Query: 175 KTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI- 233
           +T  + IT      + +G+G  G V+    +  G N A K+ +   ++ +  +  E ++ 
Sbjct: 4   RTVARDIT----LLECVGKGRYGEVWRGSWQ--GENVAVKIFS---SRDEKSWFRETELY 54

Query: 234 -MNQLCHRNLVRL----HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQ 288
               L H N++        S  +     +I+     G L   L   +          +  
Sbjct: 55  NTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTL-DTVSCLRIVLS 113

Query: 289 LLSGLDYMH--------RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           + SGL ++H        + +IAH  L   ++LV   G     + D GL+   + 
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG--QCCIADLGLAVMHSQ 165

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 58.0 bits (141), Expect = 5e-09
 Identities = 43/162 (26%), Positives = 64/162 (39%), Gaps = 31/162 (19%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
              +LG G  G VY  V +      A K +  +       F  E  +M ++ H NLV+L 
Sbjct: 17  MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLL 75

Query: 247 DSYETKDSFTIISELAGGGELLHSL--TRQSYYTEYDIAHYIRQLLSGLDYM------HR 298
                +  F II+E    G LL  L    +   +   + +   Q+ S ++Y+      HR
Sbjct: 76  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135

Query: 299 LSIAHLGLTPGDL-----LVAHPGGRHLL--LTDFGLSRRIT 333
                      DL     LV    G + L  + DFGLSR +T
Sbjct: 136 -----------DLAARNCLV----GENHLVKVADFGLSRLMT 162

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 58.2 bits (141), Expect = 5e-09
 Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 22/168 (13%)

Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
           +      +   RG  G V+ A         A K+   +  Q     + E+  +  + H N
Sbjct: 23  SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSW-QNEYEVYSLPGMKHEN 79

Query: 242 LVRLHDSYETKDSFT-----IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
           +++     E + +       +I+     G L   L      +  ++ H    +  GL Y+
Sbjct: 80  ILQFI-GAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV-VSWNELCHIAETMARGLAYL 137

Query: 297 H----------RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           H          + +I+H  +   ++L+ +       + DFGL+ +  +
Sbjct: 138 HEDIPGLKDGHKPAISHRDIKSKNVLLKNNL--TACIADFGLALKFEA 183

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 57.6 bits (140), Expect = 6e-09
 Identities = 38/160 (23%), Positives = 59/160 (36%), Gaps = 35/160 (21%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
               +G+G  G V     R  G   A K +  K +     F  E  +M QL H NLV+L 
Sbjct: 25  LLQTIGKGEFGDVMLGDYR--GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLL 80

Query: 247 DS-YETKDSFTIISELAGGGELLHSL--TRQSYYTEYDIAHYIRQLLSGLDYM------H 297
               E K    I++E    G L+  L    +S      +  +   +   ++Y+      H
Sbjct: 81  GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 140

Query: 298 RLSIAHLGLTPGDL-----LVAHPGGRHLL--LTDFGLSR 330
           R           DL     LV        +  ++DFGL++
Sbjct: 141 R-----------DLAARNVLV----SEDNVAKVSDFGLTK 165

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 57.3 bits (139), Expect = 1e-08
 Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 41/174 (23%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVMTGKGNQYKSL--FKNELDIMNQLCHRN 241
            G  LG+G  G V  A  +    ++   A K++         +  F  E   M +  H +
Sbjct: 27  LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPH 86

Query: 242 LVRL------HDSYETKDSFTIISELAGGGELLHSL------TRQSYYTEYDIAHYIRQL 289
           + +L        +        +I      G+L   L                +  ++  +
Sbjct: 87  VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDI 146

Query: 290 LSGLDYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
             G++Y+      HR           DL     ++A      + + DFGLSR+I
Sbjct: 147 ACGMEYLSSRNFIHR-----------DLAARNCMLAE--DMTVCVADFGLSRKI 187

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 56.4 bits (137), Expect = 1e-08
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 9/149 (6%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
              ELG G  G+V     +    + A K++  +G+  +  F  E   M +L H  LV+ +
Sbjct: 12  LLKELGSGQFGVVKLGKWKGQ-YDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFY 69

Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
                +    I++E    G LL+ L +         +      +  G+ ++      H  
Sbjct: 70  GVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRD 129

Query: 306 LTPGDLLVAHPGGRHLL--LTDFGLSRRI 332
           L   + LV     R L   ++DFG++R +
Sbjct: 130 LAARNCLV----DRDLCVKVSDFGMTRYV 154

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 56.5 bits (137), Expect = 2e-08
 Identities = 36/163 (22%), Positives = 61/163 (37%), Gaps = 30/163 (18%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
               +G+G  G+VYH       +N    A K +      Q    F  E  +M  L H N+
Sbjct: 25  SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84

Query: 243 VRLHD-SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM---- 296
           + L       +    ++      G+LL  + + Q   T  D+  +  Q+  G++Y+    
Sbjct: 85  LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144

Query: 297 --HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
             HR           DL     ++       + + DFGL+R I
Sbjct: 145 FVHR-----------DLAARNCMLDE--SFTVKVADFGLARDI 174

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 56.5 bits (137), Expect = 2e-08
 Identities = 35/163 (21%), Positives = 59/163 (36%), Gaps = 30/163 (18%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
           F + +GRG  G VYH     +       A K +         S F  E  IM    H N+
Sbjct: 29  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88

Query: 243 VRLHD-SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM---- 296
           + L      ++ S  ++      G+L + +       T  D+  +  Q+  G+ Y+    
Sbjct: 89  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148

Query: 297 --HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
             HR           DL     ++       + + DFGL+R +
Sbjct: 149 FVHR-----------DLAARNCMLDE--KFTVKVADFGLARDM 178

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 56.5 bits (137), Expect = 2e-08
 Identities = 34/173 (19%), Positives = 58/173 (33%), Gaps = 40/173 (23%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVMTGKGNQYKSL--FKNELDIMNQLCHRN 241
            G  LG G  G V     +         A K M    +  + +  F +E   M    H N
Sbjct: 38  LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97

Query: 242 LVRL-----HDSYETKDSFTIISELAGGGELLHSL------TRQSYYTEYDIAHYIRQLL 290
           ++RL       S +      +I      G+L   L      T   +     +  ++  + 
Sbjct: 98  VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157

Query: 291 SGLDYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
            G++Y+      HR           DL     ++       + + DFGLS++I
Sbjct: 158 LGMEYLSNRNFLHR-----------DLAARNCMLRD--DMTVCVADFGLSKKI 197

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 57.0 bits (138), Expect = 2e-08
 Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 25/167 (14%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKN---------EL 231
           +   Y+   +LG+G  GIV+ +++R +G   A K +          F+N         E+
Sbjct: 7   VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-------DAFQNSTDAQRTFREI 59

Query: 232 DIMNQLC-HRNLVRLHDSYETKDSFT---IISELAGGGELLHSLTRQSYYTEYDIAHYIR 287
            I+ +L  H N+V L +     D+     ++ +       LH++ R +        + + 
Sbjct: 60  MILTELSGHENIVNLLNVL-RADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVY 116

Query: 288 QLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           QL+  + Y+H   + H  + P ++L+      H+ + DFGLSR   +
Sbjct: 117 QLIKVIKYLHSGGLLHRDMKPSNILLNAEC--HVKVADFGLSRSFVN 161

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 56.1 bits (136), Expect = 2e-08
 Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 11/150 (7%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
             + LG G  G V+        +  A K +  +G+     F  E ++M QL H+ LVRL+
Sbjct: 17  LVERLGAGQFGEVWMGYYNGHTK-VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLY 74

Query: 247 DSYETKDSFTIISELAGGGELLHSL--TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
               T++   II+E    G L+  L        T   +     Q+  G+ ++   +  H 
Sbjct: 75  AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133

Query: 305 GLTPGDLLVAHPGGRHLL--LTDFGLSRRI 332
            L   ++LV       L   + DFGL+R I
Sbjct: 134 DLRAANILV----SDTLSCKIADFGLARLI 159

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 121

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 1092 DWITLANNI--DHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
            DWI   + I        +  L++  +Y FR+ A N++G SE   PS  +      P 
Sbjct: 63   DWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGSGPS 119

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 57.0 bits (138), Expect = 3e-08
 Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 11/150 (7%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
              +LG G  G V+ A      +  A K M   G+     F  E ++M  L H  LV+LH
Sbjct: 192 LEKKLGAGQFGEVWMATYNKHTK-VAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLH 249

Query: 247 DSYETKDSFTIISELAGGGELLHSL--TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
            +  TK+   II+E    G LL  L     S      +  +  Q+  G+ ++ + +  H 
Sbjct: 250 -AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 308

Query: 305 GLTPGDLLVAHPGGRHLL--LTDFGLSRRI 332
            L   ++LV       L+  + DFGL+R I
Sbjct: 309 DLRAANILV----SASLVCKIADFGLARVI 334

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 56.3 bits (136), Expect = 3e-08
 Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 30/163 (18%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY---AAKVM-TGKGNQYKSLFKNELDIMNQLCHRNL 242
           F + +GRG  G VYH     +       A K +         S F  E  IM    H N+
Sbjct: 93  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152

Query: 243 VRLHD-SYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM---- 296
           + L      ++ S  ++      G+L + +       T  D+  +  Q+  G+ ++    
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212

Query: 297 --HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
             HR           DL     ++       + + DFGL+R +
Sbjct: 213 FVHR-----------DLAARNCMLDE--KFTVKVADFGLARDM 242

>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A Length = 137

 Score = 53.1 bits (127), Expect = 3e-08
 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 8/103 (7%)

Query: 871 IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKL 930
           +G+    H  +  L+   R  H   F + P++    +G  +E+ C AVG P P IQW+  
Sbjct: 1   MGSSHHHHHHSSGLVP--RGSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFE 58

Query: 931 GTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIE 973
           G       P  I +   D   +  V     Y H      ++I+
Sbjct: 59  GQG-----PNDICSQLWDGARLDRVHIHATY-HQHAASTISID 95

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 55.3 bits (134), Expect = 4e-08
 Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 31/162 (19%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
           F  ELG G  G+V +   R    + A K++  +G+  +  F  E  +M  L H  LV+L+
Sbjct: 28  FLKELGTGQFGVVKYGKWRGQ-YDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 85

Query: 247 DSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYM------HRL 299
                +    II+E    G LL+ L   +  +    +    + +   ++Y+      HR 
Sbjct: 86  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR- 144

Query: 300 SIAHLGLTPGDL-----LVAHPGGRHLL--LTDFGLSRRITS 334
                     DL     LV        +  ++DFGLSR +  
Sbjct: 145 ----------DLAARNCLV----NDQGVVKVSDFGLSRYVLD 172

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 55.7 bits (134), Expect = 5e-08
 Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 5/109 (4%)

Query: 229 NELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYD---IAHY 285
            ++  M+    +N V        K    I  +L     L   + R+    + +     H 
Sbjct: 110 VKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHI 169

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             Q+   ++++H   + H  L P ++         + + DFGL   +  
Sbjct: 170 FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD--VVKVGDFGLVTAMDQ 216

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 51.8 bits (124), Expect = 8e-07
 Identities = 26/147 (17%), Positives = 56/147 (38%), Gaps = 21/147 (14%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG--------CTQRVTKLGTLIHP 1007
             + +++LH +GL H +++P N+         VK+ D G          ++        + 
Sbjct: 174  AEAVEFLHSKGLMHRDLKPSNIFFTM--DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231

Query: 1008 INTPN---PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV--N 1062
             +T       + +PE +       + D++S G++ + LL     F  Q E   R  +  +
Sbjct: 232  THTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---YSFSTQME---RVRIITD 285

Query: 1063 FVRYRFEYLFKELTQEATRFLMLIFKH 1089
                +F  LF +   +    +  +   
Sbjct: 286  VRNLKFPLLFTQKYPQEHMMVQDMLSP 312

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 46.4 bits (110), Expect = 3e-05
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 1/73 (1%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT-GKGNQYKSLFKNELDIMNQLCHRNLV 243
           ++    +GRG  G+V+ A  +    NYA K +        +     E+  + +L H  +V
Sbjct: 8   FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67

Query: 244 RLHDSYETKDSFT 256
           R  +++       
Sbjct: 68  RYFNAWLETPPEK 80

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 44.9 bits (106), Expect = 1e-04
 Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 5/75 (6%)

Query: 463 PGGELLHSLTRQSYYTEYD---IAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR 519
               L   + R+    + +     H   Q+   ++++H   + H  L P ++        
Sbjct: 144 RKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-- 201

Query: 520 HLLLTDFGLSRRITS 534
            + + DFGL   +  
Sbjct: 202 VVKVGDFGLVTAMDQ 216

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 44.1 bits (104), Expect = 2e-04
 Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 8/85 (9%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV--NFVRYRFEYLFKE 1201
            +PE +       + D++S G++ + LL     F  Q E   R  +  +    +F  LF +
Sbjct: 244  SPEQIHGNNYSHKVDIFSLGLILFELL---YSFSTQME---RVRIITDVRNLKFPLLFTQ 297

Query: 1202 LTQEATRFLMLIFKRAPGKRPTVEE 1226
               +    +  +   +P +RP   +
Sbjct: 298  KYPQEHMMVQDMLSPSPTERPEATD 322

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 55.9 bits (135), Expect = 5e-08
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 11/152 (7%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
              +LG+G  G V+      + R  A K +   G      F  E  +M +L H  LV+L+
Sbjct: 188 LEVKLGQGCFGEVWMGTWNGTTR-VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLY 245

Query: 247 DSYETKDSFTIISELAGGGELLHSLT--RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
            +  +++   I++E    G LL  L      Y     +     Q+ SG+ Y+ R++  H 
Sbjct: 246 -AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304

Query: 305 GLTPGDLLVAHPGGRHLL--LTDFGLSRRITS 334
            L   ++LV    G +L+  + DFGL+R I  
Sbjct: 305 DLRAANILV----GENLVCKVADFGLARLIED 332

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 55.5 bits (134), Expect = 7e-08
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 8/105 (7%)

Query: 954  SVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-INTPN 1012
            S+L  L  LH   + H +++P+N+++       +K+ID G +         ++  I +  
Sbjct: 208  SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTYIQS-- 262

Query: 1013 PEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
              F  APEV+         D+WS G +   LL+G     G+ E +
Sbjct: 263  -RFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD 306

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 54.7 bits (132), Expect = 1e-07
 Identities = 30/157 (19%), Positives = 68/157 (43%), Gaps = 10/157 (6%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
           +   Y+    +G+G  G V  A +    ++ A K++  +  ++      E+ I+  L  +
Sbjct: 95  VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQ 153

Query: 241 ------NLVRLHDSYETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSG 292
                 N++ + +++  ++   +  EL      EL+    +   ++   +  +   +L  
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKK-NKFQGFSLPLVRKFAHSILQC 212

Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS 329
           LD +H+  I H  L P ++L+   G   + + DFG S
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 51.2 bits (123), Expect = 8e-08
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 1090 EVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
               W T+AN++    + V+ L+  T Y F + A N  G S+    S   +T++  P 
Sbjct: 59   SNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSGPS 115

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 55.3 bits (133), Expect = 9e-08
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 11/152 (7%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
              +LG+G  G V+      + R  A K +   G      F  E  +M +L H  LV+L+
Sbjct: 271 LEVKLGQGCFGEVWMGTWNGTTR-VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLY 328

Query: 247 DSYETKDSFTIISELAGGGELLHSLT--RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHL 304
            +  +++   I++E    G LL  L      Y     +     Q+ SG+ Y+ R++  H 
Sbjct: 329 -AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 387

Query: 305 GLTPGDLLVAHPGGRHLL--LTDFGLSRRITS 334
            L   ++LV    G +L+  + DFGL+R I  
Sbjct: 388 DLRAANILV----GENLVCKVADFGLARLIED 415

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} Length = 120

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 10/56 (17%), Positives = 23/56 (41%)

Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEV 1147
            +W T+  +       + +L     Y FR+ ++N+ G SE    +       +  ++
Sbjct: 63   EWFTVIEHYHRTSATITELVIGNEYYFRVFSENMCGLSEDATMTKESAVIARDGKI 118

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 54.3 bits (131), Expect = 1e-07
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 9/113 (7%)

Query: 955  VLDGLQYLHWR-GLCHLNIEPDNVVMA----SVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            +L GL Y+H R G+ H +I+P+NV+M         +Q+K+ DLG      +     + I 
Sbjct: 140  LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQ 197

Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062
            T   E+ +PEVL   P     D+WS   L + L++G   F         ++ +
Sbjct: 198  TR--EYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 52.8 bits (127), Expect = 4e-07
 Identities = 33/163 (20%), Positives = 67/163 (41%), Gaps = 24/163 (14%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL----------- 237
            +LG G    V+ A +  +  + A K++ G    Y    ++E+ ++ ++           
Sbjct: 25  RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSM 83

Query: 238 CHRNLVRLHDSYETKDSFT----IISELAGGGELLHSLTRQSY--YTEYDIAHYIRQLLS 291
              ++++L D +  K        ++ E+ G   LL  + +  +       +    +QLL 
Sbjct: 84  GANHILKLLDHFNHKGPNGVHVVMVFEVLGE-NLLALIKKYEHRGIPLIYVKQISKQLLL 142

Query: 292 GLDYMHR-LSIAHLGLTPGDLLVAHP----GGRHLLLTDFGLS 329
           GLDYMHR   I H  + P ++L+           + + D G +
Sbjct: 143 GLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 124

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 17/54 (31%), Positives = 24/54 (44%)

Query: 1093 WITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
               L+N  D     V DL   T Y+FR+   N++G S    PS   +T +  P 
Sbjct: 69   IHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSGPS 122

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 53.9 bits (130), Expect = 2e-07
 Identities = 31/157 (19%), Positives = 66/157 (42%), Gaps = 12/157 (7%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
             D Y+    +G+G  G V  A +R      A K++  K   + +  + E+ ++  +   
Sbjct: 52  WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKH 110

Query: 241 ------NLVRLHDSYETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLLSG 292
                  +V L   +  ++   ++ E+      +LL + T     +      + +Q+ + 
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRN-TNFRGVSLNLTRKFAQQMCTA 169

Query: 293 LDYMH--RLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
           L ++    LSI H  L P ++L+ +P    + + DFG
Sbjct: 170 LLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 206

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 49.7 bits (119), Expect = 4e-06
 Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 10/107 (9%)

Query: 954  SVLDGLQYLHWR--GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHP-INT 1010
             +   L +L      + H +++P+N+++ + +   +K++D G +    +LG  I+  I +
Sbjct: 165  QMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS---CQLGQRIYQYIQS 221

Query: 1011 PNPEF-AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
                F  +PEVL   P     D+WS G +   + +G   F G +E +
Sbjct: 222  ---RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD 265

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 121

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 1088 KHEVDWITLANNIDHEF--WHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
            ++   W  L  ++D +     VK L    +Y FRL A N +G  +    +      E  P
Sbjct: 59   ENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPESGP 118

>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 13/43 (30%), Positives = 16/43 (37%)

Query: 887 SRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           S   G  P F + P  + V  G    M C   G P P + W  
Sbjct: 3   SGSSGFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQL 45

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 52.7 bits (127), Expect = 3e-07
 Identities = 27/154 (17%), Positives = 60/154 (38%), Gaps = 12/154 (7%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCH-RNLV 243
           Y  G  +G G  G+++      + +  A K             ++E      L     + 
Sbjct: 12  YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFE--PRRSDAPQLRDEYRTYKLLAGCTGIP 69

Query: 244 RLHDSYETKDSFTIISELAGG--GELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLS 300
            ++   +      ++ +L G    +LL    R+ S  T    A   +Q+L+ +  +H  S
Sbjct: 70  NVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAA---KQMLARVQSIHEKS 126

Query: 301 IAHLGLTPGDLLVAHPGGRH---LLLTDFGLSRR 331
           + +  + P + L+  P  ++   + + DFG+ + 
Sbjct: 127 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 127

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 15/55 (27%), Positives = 21/55 (38%)

Query: 1093 WITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEV 1147
            W         +     +L    NY+FR+ A N IG S     S  + TK   P+ 
Sbjct: 64   WHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDK 118

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 53.3 bits (128), Expect = 4e-07
 Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 7/97 (7%)

Query: 842 DEEIDDERRNRINKYGAADTYTLRRLRHE-------IGTRPEAHVEADALIESRRDGHAP 894
            E + D+   + +      T  + +             + P     + A +        P
Sbjct: 139 GELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPP 198

Query: 895 FFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
           FF  KP+++ + +G+    KC   G     I W K  
Sbjct: 199 FFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDN 235

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 49.0 bits (117), Expect = 8e-06
 Identities = 12/97 (12%), Positives = 30/97 (30%), Gaps = 7/97 (7%)

Query: 842 DEEIDDERRNRINKYGAADTYTLRRLRHE-------IGTRPEAHVEADALIESRRDGHAP 894
             ++      ++       +  + ++ H                V + A++  +     P
Sbjct: 43  HTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLPP 102

Query: 895 FFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
            F  K   +   +G  +  +C   G     + W+K G
Sbjct: 103 SFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDG 139

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 46.3 bits (110), Expect = 6e-05
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
            P+F E    +   IG+ + ++C   G P+  I W+K  T
Sbjct: 5   PPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHT 44

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 45.6 bits (108), Expect = 1e-04
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            P FR+KP  +  + G  + ++C   G P   + W K
Sbjct: 384 PPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHK 420

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 42.5 bits (100), Expect = 8e-04
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
            P F +K   I  V+G++++++    G     + WFK  
Sbjct: 477 PPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDK 515

>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens} Length = 212

 Score = 51.4 bits (123), Expect = 4e-07
 Identities = 12/76 (15%), Positives = 20/76 (26%), Gaps = 2/76 (2%)

Query: 854 NKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEM 913
           +            L  +      A  +            A      P  + +  G  L +
Sbjct: 80  DGKTGHQKTV--DLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNL 137

Query: 914 KCLAVGEPKPVIQWFK 929
            C   G+P P + W K
Sbjct: 138 TCNVWGDPPPEVSWLK 153

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 53.1 bits (128), Expect = 4e-07
 Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 13/149 (8%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH 246
               +G+G  G V     R  G   A K +  K +     F  E  +M QL H NLV+L 
Sbjct: 197 LLQTIGKGEFGDVMLGDYR--GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLL 252

Query: 247 D-SYETKDSFTIISELAGGGELLHSLT--RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
               E K    I++E    G L+  L    +S      +  +   +   ++Y+   +  H
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 312

Query: 304 LGLTPGDLLVAHPGGRHLL--LTDFGLSR 330
             L   ++LV        +  ++DFGL++
Sbjct: 313 RDLAARNVLV----SEDNVAKVSDFGLTK 337

>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A Length = 93

 Score = 48.1 bits (115), Expect = 5e-07
 Identities = 7/37 (18%), Positives = 11/37 (29%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            P        I +  G    ++   +G P P   W  
Sbjct: 2   KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTV 38

>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A Length = 106

 Score = 48.1 bits (115), Expect = 6e-07
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 886 ESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            S +   A     KP ++ V  G+     C   GEP P + W +
Sbjct: 7   HSSKTTLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLR 50

>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 48.2 bits (115), Expect = 8e-07
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            P  R+ P+   V +     + C+A G P P I W K
Sbjct: 8   PPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRK 44

>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A Length = 197

 Score = 50.1 bits (120), Expect = 9e-07
 Identities = 19/87 (21%), Positives = 28/87 (32%), Gaps = 13/87 (14%)

Query: 876 EAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK------ 929
                A   +E     H P   E    +  + G+ + +K    G+P PVI W K      
Sbjct: 87  SVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLID 146

Query: 930 -------LGTSTLCYLPIVIPTTHKDA 949
                  + T +   L        KDA
Sbjct: 147 NNGHYQVIVTRSFTSLVFPNGVERKDA 173

>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A Length = 197

 Score = 48.6 bits (116), Expect = 3e-06
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 891 GHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
             AP F+E+   + V       + C   G PKP+++W++
Sbjct: 2   AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYR 40

>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A Length = 194

 Score = 49.7 bits (119), Expect = 9e-07
 Identities = 9/52 (17%), Positives = 26/52 (50%)

Query: 878 HVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
              + A +  + +   P F ++  ++ V  G ++ ++    G P PV+++++
Sbjct: 88  QATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYR 139

>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A Length = 194

 Score = 47.8 bits (114), Expect = 4e-06
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            AP F +   ++ V+ G     +    G P P + WF+
Sbjct: 4   QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFR 41

>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus} Length = 192

 Score = 49.7 bits (119), Expect = 9e-07
 Identities = 8/37 (21%), Positives = 14/37 (37%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           AP       T+  ++ +     C     P+P I W +
Sbjct: 7   APVITTPLETVDALVEEVATFMCAVESYPQPEISWTR 43

>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus} Length = 192

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
            P     PI + ++ G K  + C  +G PKP + W K  
Sbjct: 100 KPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGD 138

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 51.2 bits (123), Expect = 1e-06
 Identities = 40/171 (23%), Positives = 61/171 (35%), Gaps = 36/171 (21%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY-----AAKVM-TGKGNQYKSLFKNELDIMNQLCHR 240
               LG G  G VY         +      A K +      Q +  F  E  I+++  H+
Sbjct: 34  LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 93

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSL-------TRQSYYTEYDIAHYIRQLLSGL 293
           N+VR            I+ EL  GG+L   L       ++ S     D+ H  R +  G 
Sbjct: 94  NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153

Query: 294 DYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLL-LTDFGLSRRI 332
            Y+      HR           D+     L+  PG   +  + DFG++R I
Sbjct: 154 QYLEENHFIHR-----------DIAARNCLLTCPGPGRVAKIGDFGMARDI 193

>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4 Length = 114

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 8/37 (21%), Positives = 12/37 (32%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            P   + P    V  G+ +E+     G       W K
Sbjct: 7   GPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMK 43

>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 100

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
            P   + P    + +     +KC A G+P PVI W K G
Sbjct: 8   PPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEG 46

>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 96

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 6/54 (11%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTH 946
                 +P    V  G  + + C    +P P I W K G       P+ +P + 
Sbjct: 10  EVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGV------PLPLPPSP 57

>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A Length = 212

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 15/62 (24%), Positives = 22/62 (35%)

Query: 870 EIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            +G    A          +     P   + P T  + +G  + M C A+G P P I W K
Sbjct: 87  GVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIK 146

Query: 930 LG 931
             
Sbjct: 147 NQ 148

>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A Length = 212

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 15/40 (37%), Positives = 17/40 (42%)

Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
           H P    KP    V +G      C A G+P P I W K G
Sbjct: 5   HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNG 44

>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens} Length = 317

 Score = 50.7 bits (121), Expect = 1e-06
 Identities = 12/76 (15%), Positives = 20/76 (26%), Gaps = 2/76 (2%)

Query: 854 NKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEM 913
           +            L  +      A  +            A      P  + +  G  L +
Sbjct: 185 DGKTGHQKTV--DLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNL 242

Query: 914 KCLAVGEPKPVIQWFK 929
            C   G+P P + W K
Sbjct: 243 TCNVWGDPPPEVSWLK 258

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 9/59 (15%), Positives = 17/59 (28%)

Query: 1088 KHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
                      + +    + +  L   + Y FR+ A N IG             ++  P 
Sbjct: 46   AGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQSGPS 104

>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} Length = 108

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           AP            IG+ +E+ C A G P P I WFK
Sbjct: 10  APTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFK 46

>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens} Length = 116

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 887 SRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           S     AP F  KP +  V+ GD ++++C     P P + W +
Sbjct: 9   SHEHKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKR 51

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 50.9 bits (122), Expect = 2e-06
 Identities = 40/171 (23%), Positives = 61/171 (35%), Gaps = 36/171 (21%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY-----AAKVM-TGKGNQYKSLFKNELDIMNQLCHR 240
               LG G  G VY         +      A K +      Q +  F  E  I+++  H+
Sbjct: 75  LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 134

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSL-------TRQSYYTEYDIAHYIRQLLSGL 293
           N+VR            I+ EL  GG+L   L       ++ S     D+ H  R +  G 
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194

Query: 294 DYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLL-LTDFGLSRRI 332
            Y+      HR           D+     L+  PG   +  + DFG++R I
Sbjct: 195 QYLEENHFIHR-----------DIAARNCLLTCPGPGRVAKIGDFGMARDI 234

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 50.5 bits (121), Expect = 2e-06
 Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 12/154 (7%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCH-RNLV 243
           +  G ++G G  G +       +    A K+   K          E     QL     + 
Sbjct: 11  FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIP 68

Query: 244 RLHDSYETKDSFTIISELAGG--GELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLS 300
           +++          ++ EL G    +L     R  S  T   IA    QL+S ++Y+H  +
Sbjct: 69  QVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIA---IQLISRMEYVHSKN 125

Query: 301 IAHLGLTPGDLLV---AHPGGRHLLLTDFGLSRR 331
           + +  + P + L+    +   + + + DF L++ 
Sbjct: 126 LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 50.4 bits (121), Expect = 2e-06
 Identities = 36/173 (20%), Positives = 62/173 (35%), Gaps = 40/173 (23%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY-----AAKVM-TGKGNQYKSLFKNELDIMNQLCHR 240
              ELG+G  G+VY  V +   ++      A K +      + +  F NE  +M +    
Sbjct: 29  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSL----------TRQSYYTEYDIAHYIRQLL 290
           ++VRL           +I EL   G+L   L             +  +   +     ++ 
Sbjct: 89  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148

Query: 291 SGLDYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
            G+ Y+      HR           DL     +VA      + + DFG++R I
Sbjct: 149 DGMAYLNANKFVHR-----------DLAARNCMVAE--DFTVKIGDFGMTRDI 188

>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens} Length = 197

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 890 DGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            G AP  R++   +   +G+  ++ C  VG P P I+W++
Sbjct: 4   SGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYR 43

>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens} Length = 197

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 17/100 (17%)

Query: 842 DEEIDDERRNRINKYGAADTYTLRRLRHE------------IGTRPEAHVEADALIESRR 889
            +E+   R+ +++  G   T T+     E            +G   E    +  L+++  
Sbjct: 45  GKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVG---EVETSSKLLLQATP 101

Query: 890 DGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
             H  +  ++       +G  L +  + +G P P + WF 
Sbjct: 102 QFHPGYPLKEKYY--GAVGSTLRLHVMYIGRPVPAMTWFH 139

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 110

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 1/54 (1%)

Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
            +   +    + E   V  L     Y+FRL A N +G+        +       P
Sbjct: 55   EPREVYQGSEVEC-TVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGSGP 107

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 50.1 bits (120), Expect = 2e-06
 Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 10/152 (6%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCH-RNLV 243
           Y  G ++G G  G +Y   + ++G   A K+   K  ++  L   E  I   +     + 
Sbjct: 11  YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK-TKHPQL-HIESKIYKMMQGGVGIP 68

Query: 244 RLHDSYETKDSFTIISELAGG--GELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLS 300
            +       D   ++ EL G    +L +  +R+ S  T   +A    Q++S ++Y+H  +
Sbjct: 69  TIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLA---DQMISRIEYIHSKN 125

Query: 301 IAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRR 331
             H  + P + L+     G  + + DFGL+++
Sbjct: 126 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 49.9 bits (120), Expect = 2e-06
 Identities = 40/176 (22%), Positives = 62/176 (35%), Gaps = 37/176 (21%)

Query: 187 FGDELGRGVTGIVYHA-VERSSGRNYAAKV---MTGKGNQYKSL--FKNELDIMNQL-CH 239
           FG  LG G  G V  A        + A  V   M              +EL +++ L  H
Sbjct: 27  FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSL------------------TRQSYYTEYD 281
            N+V L  +        +I+E    G+LL+ L                    +      D
Sbjct: 87  MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146

Query: 282 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
           +  +  Q+  G+ ++   +  H      DL     L+ H  GR   + DFGL+R I
Sbjct: 147 LLSFSYQVAKGMAFLASKNCIH-----RDLAARNILLTH--GRITKICDFGLARDI 195

>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 99

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 11/37 (29%), Positives = 14/37 (37%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           AP F        V+ G    ++C   G P P I W  
Sbjct: 11  APSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLL 47

>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens} Length = 218

 Score = 49.1 bits (117), Expect = 3e-06
 Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 5/63 (7%)

Query: 871 IGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKL 930
           +G+    H  +  L+              P +  V+ G  +++ C A G P    QWFK+
Sbjct: 1   MGSSHHHHHHSSGLV-----PRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKM 55

Query: 931 GTS 933
              
Sbjct: 56  NKE 58

>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens} Length = 218

 Score = 45.6 bits (108), Expect = 3e-05
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
                 +P +  ++ G  L ++C+AVG P P  QWFK
Sbjct: 118 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFK 154

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 1092 DWITL-ANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
            DWI    + ID   + +  L  +     R+ A N  G SE    S     KE  P
Sbjct: 53   DWIVANKDLIDKTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKESGP 107

>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 16/43 (37%), Positives = 18/43 (41%)

Query: 887 SRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           S     APFF  K     +  G  +   C   G PKP I WFK
Sbjct: 2   SSGSSGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFK 44

>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A Length = 191

 Score = 48.3 bits (115), Expect = 3e-06
 Identities = 9/40 (22%), Positives = 12/40 (30%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
              F+  P       G+   + C  V    P I W   G 
Sbjct: 100 KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGR 139

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 Length = 115

 Score = 46.4 bits (110), Expect = 3e-06
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 12/70 (17%)

Query: 1088 KHEVDWITLANNIDHEFWH------------VKDLKRETNYTFRLSAKNVIGWSEKGIPS 1135
                +W T  +NI +                V DLK +  Y FR+ A      +++   S
Sbjct: 44   GKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTS 103

Query: 1136 ALFKTKEQAP 1145
            A F  +  A 
Sbjct: 104  AKFYLQPGAA 113

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 109

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 12/54 (22%), Positives = 20/54 (37%)

Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
                   + +   + VK+L+R T Y F++ A N  G S            +  P
Sbjct: 53   YGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDSGP 106

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 Length = 120

 Score = 46.5 bits (110), Expect = 4e-06
 Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
             +  +          V+ L+  T Y FRL   +  G  E     ++  T+E  P
Sbjct: 65   SYGVIYTGYATRH-VVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRESGP 117

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 Length = 111

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 1092 DWITLAN-NIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
            +W+      ++   + VKDL       FR+   N+ G SE          +E  P
Sbjct: 54   EWVPANKEPVERCGFTVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRESGP 108

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 49.2 bits (118), Expect = 4e-06
 Identities = 37/176 (21%), Positives = 60/176 (34%), Gaps = 37/176 (21%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMT--------GKGNQYKSLFKNELDIMNQL- 237
            G  LG G  G V  A      ++   + +T            +  S   +E+++M  + 
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98

Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSL----------------TRQSYYTEYD 281
            H+N++ L  +        +I E A  G L   L                  +   T  D
Sbjct: 99  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158

Query: 282 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
           +     QL  G++Y+      H      DL     LV       + + DFGL+R I
Sbjct: 159 LVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTE--NNVMKIADFGLARDI 207

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} Length = 122

 Score = 46.3 bits (110), Expect = 4e-06
 Identities = 14/55 (25%), Positives = 17/55 (30%)

Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
             W             +  LK ET Y  RL+A N  G  E    S       + P 
Sbjct: 56   KWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPS 110

>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens} Length = 189

 Score = 47.9 bits (114), Expect = 5e-06
 Identities = 9/39 (23%), Positives = 12/39 (30%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
              FRE         G+  E+ C     P P + W    
Sbjct: 2   MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHN 40

>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens} Length = 189

 Score = 42.1 bits (99), Expect = 4e-04
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           A    +K        G+++   C A G P+P I WF+
Sbjct: 98  AISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR 134

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205

 Score = 47.8 bits (114), Expect = 5e-06
 Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 1092 DWITLANNI-DHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
             W      + + +   V  +    NYTFR+ A N IG S     S    T+   P 
Sbjct: 50   SWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPF 105

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A Length = 284

 Score = 48.6 bits (116), Expect = 5e-06
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            PFF  KP+++ + +G+    KC   G     I W K
Sbjct: 5   PPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAK 41

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A Length = 284

 Score = 46.3 bits (110), Expect = 3e-05
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            P FR+KP  +  + G  + ++C   G P   + W K
Sbjct: 192 PPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHK 228

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 107

 Score = 45.5 bits (108), Expect = 6e-06
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 4/59 (6%)

Query: 1088 KHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPS-ALFKTKEQAP 1145
              E    T+    D + + V  L + T Y FRL+AKN  G  E         +T E   
Sbjct: 47   ADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGLGE---EFEKEIRTPEDLS 102

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens} Length = 291

 Score = 48.7 bits (116), Expect = 6e-06
 Identities = 9/39 (23%), Positives = 12/39 (30%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
              FRE         G+  E+ C     P P + W    
Sbjct: 98  KLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHN 136

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} Length = 305

 Score = 48.6 bits (116), Expect = 6e-06
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEV 1147
             W+ +    +  +  V +L  +T+Y FR+ A+N  G S+   PS    TKE     
Sbjct: 244  RWLRVGQARETRY-TVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKEDKTRA 298

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} Length = 305

 Score = 45.5 bits (108), Expect = 6e-05
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTL 935
           AP F+E+   + V       + C   G PKP+++W++ G   +
Sbjct: 4   APHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEII 46

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} Length = 305

 Score = 45.5 bits (108), Expect = 7e-05
 Identities = 14/54 (25%), Positives = 21/54 (38%)

Query: 876 EAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
                A   +E     H P   E    +  + G+ + +K    G+P PVI W K
Sbjct: 87  SVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQK 140

>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens} Length = 103

 Score = 45.4 bits (108), Expect = 6e-06
 Identities = 7/38 (18%), Positives = 13/38 (34%)

Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           HAP    +  +  V  G           +P   ++W+ 
Sbjct: 7   HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYH 44

>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens} Length = 100

 Score = 45.0 bits (107), Expect = 6e-06
 Identities = 9/37 (24%), Positives = 14/37 (37%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            P F + P  + +  G    M     G P P + W+ 
Sbjct: 5   PPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYL 41

>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens} Length = 99

 Score = 45.0 bits (107), Expect = 7e-06
 Identities = 9/37 (24%), Positives = 11/37 (29%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            P          V      +    A GEP+P   W K
Sbjct: 6   KPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTK 42

>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 Length = 182

 Score = 47.1 bits (112), Expect = 7e-06
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
                  P+ + V  G  +++ C   G  +P IQW K G
Sbjct: 2   GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDG 40

>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 Length = 182

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPV-IQWFKLGT 932
            PFF  +P  + V      ++ C AVG P+PV I W++  T
Sbjct: 98  VPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTT 138

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 48.4 bits (116), Expect = 7e-06
 Identities = 49/183 (26%), Positives = 69/183 (37%), Gaps = 39/183 (21%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQL-CHRNL 242
           F D +G G  G V  A  +  G    A +   K          F  EL+++ +L  H N+
Sbjct: 29  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYI----------RQLL-- 290
           + L  + E +    +  E A  G LL  L R+S   E D A  I          +QLL  
Sbjct: 89  INLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLHF 147

Query: 291 -----SGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSR-----RITSF 335
                 G+DY+ +    H      DL     LV         + DFGLSR        + 
Sbjct: 148 AADVARGMDYLSQKQFIH-----RDLAARNILVGE--NYVAKIADFGLSRGQEVYVKKTM 200

Query: 336 GKL 338
           G+L
Sbjct: 201 GRL 203

>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens} Length = 91

 Score = 44.6 bits (106), Expect = 8e-06
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 891 GHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
           G       +P +  ++ G  L ++C+AVG P P  QWFK   
Sbjct: 1   GSKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNEL 42

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 48.5 bits (116), Expect = 9e-06
 Identities = 39/184 (21%), Positives = 59/184 (32%), Gaps = 53/184 (28%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY-----KSL-----------FKNE 230
            G  LG G  G V  A         A  +   K  +      K L             +E
Sbjct: 85  LGKPLGEGCFGQVVMA--------EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136

Query: 231 LDIMNQL-CHRNLVRLHDSYETKDSFTIISELAGGGELLHSL----------------TR 273
           +++M  +  H+N++ L  +        +I E A  G L   L                  
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196

Query: 274 QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGL 328
           +   T  D+     QL  G++Y+      H      DL     LV       + + DFGL
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTE--NNVMKIADFGL 249

Query: 329 SRRI 332
           +R I
Sbjct: 250 ARDI 253

>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A Length = 154

 Score = 46.0 bits (109), Expect = 9e-06
 Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 858 AADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLA 917
           A+ +     +        +A +E  A  +       P+F +  + + VV G      C  
Sbjct: 9   ASGSSPTSPINANKVENEDAFLEEVAEEKPHV---KPYFTKTILDMEVVEGSAARFDCKV 65

Query: 918 VGEPKPVIQWFK 929
            G P P + WFK
Sbjct: 66  EGYPDPEVMWFK 77

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens} Length = 304

 Score = 47.9 bits (114), Expect = 1e-05
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTS 933
            P F ++P     V G      C A G+PKP + W K G  
Sbjct: 6   PPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKK 46

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens} Length = 304

 Score = 47.9 bits (114), Expect = 1e-05
 Identities = 14/49 (28%), Positives = 26/49 (53%)

Query: 881 ADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           + A +  R    AP F   P++  ++ G  + + C+AVG P P ++W +
Sbjct: 193 SPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQ 241

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens} Length = 304

 Score = 47.1 bits (112), Expect = 2e-05
 Identities = 15/48 (31%), Positives = 16/48 (33%)

Query: 884 LIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
           L E +     P     P    V       M C A G P P I WFK  
Sbjct: 99  LREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDF 146

>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens} Length = 99

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            P F+   +   V  G  + M     GEPKPV+ W +
Sbjct: 5   PPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLR 41

>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A Length = 212

 Score = 47.1 bits (112), Expect = 1e-05
 Identities = 14/44 (31%), Positives = 15/44 (34%)

Query: 886 ESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           E +     P     P    V       M C A G P P I WFK
Sbjct: 101 EDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFK 144

>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A Length = 212

 Score = 45.6 bits (108), Expect = 4e-05
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            P F   P+    V G      C A G+P+P I W K
Sbjct: 6   PPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNK 42

>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4 Length = 99

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            AP   E+  +  V  G     +   VG+P P  +W+K
Sbjct: 4   EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYK 41

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 47.7 bits (114), Expect = 1e-05
 Identities = 35/177 (19%), Positives = 57/177 (32%), Gaps = 44/177 (24%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY-----AAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
              ELG G  G V+ A   +          A K +       +  F+ E +++  L H++
Sbjct: 45  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSL---------------TRQSYYTEYDIAHYI 286
           +VR            ++ E    G+L   L                         +    
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164

Query: 287 RQLLSGLDYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
            Q+ +G+ Y+      HR           DL     LV    G  + + DFG+SR I
Sbjct: 165 SQVAAGMVYLAGLHFVHR-----------DLATRNCLVGQ--GLVVKIGDFGMSRDI 208

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 118

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 10/58 (17%), Positives = 16/58 (27%)

Query: 1088 KHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
                           + + +  L       FRLSA+N  G S        + +    P
Sbjct: 58   GKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCSGP 115

>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens} Length = 201

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 9/40 (22%), Positives = 20/40 (50%)

Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
           +      +   +  ++G  + ++C A+G P P I+W K+ 
Sbjct: 112 YPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVL 151

>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus} Length = 190

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 11/39 (28%), Positives = 13/39 (33%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
           AP       +     G    M C +VG P P   W K  
Sbjct: 92  APDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKE 130

>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A Length = 212

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 888 RRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           R++   P   E P  + V  G+   + C A G P P I+W+K
Sbjct: 4   RQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYK 45

>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A Length = 212

 Score = 42.5 bits (100), Expect = 3e-04
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFK 929
              FR+ P  + V +G+   M+C    G P+P I W K
Sbjct: 111 RDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKK 148

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 47.2 bits (112), Expect = 2e-05
 Identities = 39/216 (18%), Positives = 68/216 (31%), Gaps = 33/216 (15%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL--- 237
               Y    +LG G    V+ + +    +  A KV+      Y     +E+ ++  +   
Sbjct: 35  FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS-AEHYTETALDEIRLLKSVRNS 93

Query: 238 -----CHRNLVRLHDSYETKDSFTIIS----------ELAGGGELLHSLTRQSYY---TE 279
                    +V+L D       F I            E+ G    L     +S Y     
Sbjct: 94  DPNDPNREMVVQLLDD------FKISGVNGTHICMVFEVLG--HHLLKWIIKSNYQGLPL 145

Query: 280 YDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL 338
             +   I+Q+L GLDY+H    I H  + P ++L++       +      +      G  
Sbjct: 146 PCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN--EQYIRRLAAEATEWQRSGAP 203

Query: 339 NPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTD 374
            P    V        +  +N  + K  E       D
Sbjct: 204 PPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIAD 239

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 43.4 bits (102), Expect = 4e-04
 Identities = 33/150 (22%), Positives = 52/150 (34%), Gaps = 52/150 (34%)

Query: 955  VLDGLQYLHWR-GLCHLNIEPDNVVMAS-------------------------------- 981
            VL GL YLH +  + H +I+P+N++++                                 
Sbjct: 155  VLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAP 214

Query: 982  ---------------VRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026
                              ++VK+ DLG    V K  T    I T   ++ + EVL     
Sbjct: 215  ATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFT--EDIQTR--QYRSLEVLIGSGY 270

Query: 1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
                D+WS   +A+ L +G   F   S  E
Sbjct: 271  NTPADIWSTACMAFELATGDYLFEPHSGEE 300

>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A* Length = 217

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
            +P   E P  + V   +   + C   G+P+P I+WFK G
Sbjct: 8   QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDG 47

>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A* Length = 217

 Score = 42.5 bits (100), Expect = 3e-04
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFK 929
              FR +P    V  G+   ++C    G P+P + W K
Sbjct: 108 RDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIK 145

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 47.0 bits (112), Expect = 3e-05
 Identities = 35/183 (19%), Positives = 67/183 (36%), Gaps = 25/183 (13%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVR 244
           +  G ++G G  G++Y A   +     A  V+  +  +   LF +EL    ++  ++ ++
Sbjct: 39  WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLF-SELKFYQRVAKKDCIK 97

Query: 245 LHDSYETKDSFTI-------ISELAGGG------ELL-HSLT-------RQSYYTEYDIA 283
                +  D   I       ++E  G        E L   L             T   + 
Sbjct: 98  KWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLG 157

Query: 284 HYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEY 343
               ++L  L+Y+H     H  +   +LL+ +     + L D+GLS R    G     + 
Sbjct: 158 ---IRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQE 214

Query: 344 DVR 346
           + R
Sbjct: 215 NPR 217

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 42.8 bits (101), Expect = 6e-04
 Identities = 15/51 (29%), Positives = 23/51 (45%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH 1006
            LD L+Y+H     H +I+  N+++      QV L D G + R    G    
Sbjct: 161  LDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQ 211

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 46.9 bits (112), Expect = 3e-05
 Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 19/148 (12%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCH 239
           + +A+    ++G G  G V       + + YA KV+  +  + Y    K E DI+ ++ +
Sbjct: 33  LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV--RNIKKYTRSAKIEADILKKIQN 90

Query: 240 R-----NLVRLHDSYETKDSFTIISELAGGGELLHSL------TRQSYYTEYDIAHYIRQ 288
                 N+V+ H  +   D   +I E      L  SL         + +   DI  Y  +
Sbjct: 91  DDINNNNIVKYHGKFMYYDHMCLIFEP-----LGPSLYEIITRNNYNGFHIEDIKLYCIE 145

Query: 289 LLSGLDYMHRLSIAHLGLTPGDLLVAHP 316
           +L  L+Y+ ++S+ H  L P ++L+  P
Sbjct: 146 ILKALNYLRKMSLTHTDLKPENILLDDP 173

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 46.5 bits (111), Expect = 3e-05
 Identities = 43/172 (25%), Positives = 65/172 (37%), Gaps = 33/172 (19%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAK---VMTGKGN---QYKSLFKNELDIMNQL-CH 239
           FG  LG G  G V  A     G+  A     V   K       K    +EL IM+ L  H
Sbjct: 50  FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSL--------------TRQSYYTEYDIAHY 285
            N+V L  +        +I+E    G+LL+ L                 S  +  D+ H+
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
             Q+  G+ ++   +  H      D+     L+ +  G    + DFGL+R I
Sbjct: 170 SSQVAQGMAFLASKNCIH-----RDVAARNVLLTN--GHVAKIGDFGLARDI 214

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 47.2 bits (112), Expect = 3e-05
 Identities = 15/54 (27%), Positives = 22/54 (40%)

Query: 879 VEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
            EA A ++       P  R+      +  G  + +KC+A G P P I W   G 
Sbjct: 415 AEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGK 468

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 45.3 bits (107), Expect = 1e-04
 Identities = 10/39 (25%), Positives = 12/39 (30%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
               +  P T  V  G      C   G P   + W K G
Sbjct: 343 PLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDG 381

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTK 1141
             W             +  LK ET Y  RL+A N  G  E    S  FKT+
Sbjct: 55   KWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASE-FKTQ 103

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 46.6 bits (111), Expect = 3e-05
 Identities = 35/176 (19%), Positives = 59/176 (33%), Gaps = 37/176 (21%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMT--------GKGNQYKSLFKNELDIMNQL- 237
            G  LG G  G V  A      ++   +V              +  S   +E+++M  + 
Sbjct: 73  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132

Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSL----------------TRQSYYTEYD 281
            H+N++ L  +        +I E A  G L   L                  +   +  D
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192

Query: 282 IAHYIRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
           +     Q+  G++Y+      H      DL     LV       + + DFGL+R I
Sbjct: 193 LVSCAYQVARGMEYLASKKCIH-----RDLAARNVLVTE--DNVMKIADFGLARDI 241

>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens} Length = 241

 Score = 45.7 bits (108), Expect = 3e-05
 Identities = 11/45 (24%), Positives = 16/45 (35%)

Query: 885 IESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           +  R           P     V+G  +E  C    + +P IQW K
Sbjct: 106 VLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLK 150

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389

 Score = 46.7 bits (111), Expect = 3e-05
 Identities = 9/54 (16%), Positives = 19/54 (35%)

Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
             W  + ++       + +L+  T Y  R++A N  G  +            + P
Sbjct: 241  IWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREP 294

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389

 Score = 43.6 bits (103), Expect = 3e-04
 Identities = 8/37 (21%), Positives = 12/37 (32%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           AP F           G+ + + C     P   I W +
Sbjct: 100 APKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRR 136

>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} Length = 117

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 15/45 (33%), Positives = 22/45 (48%)

Query: 888 RRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
           R++   P   E P  + V  G+   + C A G P P I+W+K G 
Sbjct: 4   RQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGE 48

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} Length = 114

 Score = 43.3 bits (102), Expect = 3e-05
 Identities = 11/61 (18%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 1090 EVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLA 1149
            E  W+      + +   ++ L+    Y  +++A N +G+SE   P+    +    P ++ 
Sbjct: 51   EDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSE---PTVYEFSMPPKPNIIK 107

Query: 1150 E 1150
            +
Sbjct: 108  D 108

>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4 Length = 126

 Score = 43.8 bits (103), Expect = 3e-05
 Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEP---KPVIQWFK 929
              F EKP    V +G+ +        E    KP I+WFK
Sbjct: 7   GILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFK 46

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 46.9 bits (111), Expect = 4e-05
 Identities = 29/152 (19%), Positives = 61/152 (40%), Gaps = 10/152 (6%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLV- 243
           +  G ++G G  G +Y      +    A K+   K          E  I   L     + 
Sbjct: 9   FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIP 66

Query: 244 RLHDSYETKDSFTIISELAGG--GELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLS 300
            +       D   ++ +L G    +L +  +R+ S  T   +A    Q+++ ++++H  S
Sbjct: 67  NVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLA---DQMINRVEFVHSKS 123

Query: 301 IAHLGLTPGDLLVAHPGGRHLL-LTDFGLSRR 331
             H  + P + L+      + + + DFGL+++
Sbjct: 124 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A* Length = 404

 Score = 46.8 bits (111), Expect = 4e-05
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           AP++ ++P  + +  G+   + C A G PKP +QW  
Sbjct: 312 APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMV 348

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A Length = 382

 Score = 46.4 bits (110), Expect = 4e-05
 Identities = 13/65 (20%), Positives = 22/65 (33%)

Query: 867 LRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQ 926
           +     +      +     E  R        + P     + G  + ++C A G P P I+
Sbjct: 181 IDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIK 240

Query: 927 WFKLG 931
           W KL 
Sbjct: 241 WRKLD 245

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A Length = 382

 Score = 45.6 bits (108), Expect = 9e-05
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
            P + +        IG  L   C+A G+P+P ++W + G
Sbjct: 294 QPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDG 332

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A Length = 382

 Score = 42.5 bits (100), Expect = 6e-04
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 3/44 (6%)

Query: 892 HAPFFREKP---ITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
           + P F E+P   +       +K+ + C A   P    +W   GT
Sbjct: 3   YGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGT 46

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 47.1 bits (111), Expect = 4e-05
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 889 RDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
            +  AP            IG+ +E+ C A G P P I WFK  
Sbjct: 662 LERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDN 704

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 45.5 bits (107), Expect = 1e-04
 Identities = 9/55 (16%), Positives = 20/55 (36%)

Query: 878 HVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
             +    +         F       +   +G+++ +    +G P P I+W+K G 
Sbjct: 315 TKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGI 369

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 46.5 bits (109), Expect = 5e-05
 Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 9/94 (9%)

Query: 1054 EPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRE 1113
              +   ++  V Y  +  +      +             W T+A   D     + D++  
Sbjct: 182  SSKFNISIEPVIYVVQRRWNYGIHPSE-------DDATHWQTVAQTTDERV-QLTDIRPS 233

Query: 1114 TNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEV 1147
              Y FR++A NV G      PS  F++  + P  
Sbjct: 234  RWYQFRVAAVNVHGTRGFTAPSKHFRS-SKDPSA 266

>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A Length = 100

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 4/46 (8%)

Query: 890 DGHAPFF----REKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
           +  AP++    + +     V   + ++ +C A G P P ++W K G
Sbjct: 1   NKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNG 46

>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A Length = 291

 Score = 45.6 bits (108), Expect = 6e-05
 Identities = 9/39 (23%), Positives = 12/39 (30%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
              F+  P       G+   + C  V    P I W   G
Sbjct: 100 KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKG 138

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 1092 DWITL-ANNIDHEFWHVKDLKRETNYTFRLSAKNVIGW-SEKGIPSALFKTKE 1142
             W+    +NI    + V  L  +  Y FR+ AKN  G  S    PS     ++
Sbjct: 56   RWLKANFSNILENEFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRD 108

>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 Length = 334

 Score = 45.4 bits (107), Expect = 7e-05
 Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 6/82 (7%)

Query: 854 NKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFF----REKPITIPVVIGD 909
                   +++R    +  +  +     D   ++  D  AP++    R     + V   +
Sbjct: 82  LTQRVLCHFSVRV--TDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAAN 139

Query: 910 KLEMKCLAVGEPKPVIQWFKLG 931
            +  +C A G P P I W K G
Sbjct: 140 TVRFRCPAAGNPTPSISWLKNG 161

>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 Length = 334

 Score = 44.6 bits (105), Expect = 1e-04
 Identities = 18/77 (23%), Positives = 25/77 (32%), Gaps = 20/77 (25%)

Query: 854 NKYGAAD-TYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLE 912
           NK+G+   TYTL                    +  R           P     V+G  +E
Sbjct: 201 NKFGSIRQTYTLD-------------------VLERSPHRPILQAGLPANQTAVLGSDVE 241

Query: 913 MKCLAVGEPKPVIQWFK 929
             C    + +P IQW K
Sbjct: 242 FHCKVYSDAQPHIQWLK 258

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 45.4 bits (108), Expect = 8e-05
 Identities = 34/187 (18%), Positives = 68/187 (36%), Gaps = 22/187 (11%)

Query: 156 VEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAA-K 214
           VED++  +                 + + Y+    LG G  G V   ++ + G++  A K
Sbjct: 1   VEDDKEGH-LVCRIG--------DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALK 51

Query: 215 VMTGKGNQ-YKSLFKNELDIMNQLCHR------NLVRLHDSYETKDSFTIISELAGGG-- 265
           ++  +    Y+   + E++++ ++  +        V + D +       I  EL G    
Sbjct: 52  II--RNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTF 109

Query: 266 ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTD 325
           E L     Q Y   + + H   QL   L ++H   + H  L P ++L  +     L    
Sbjct: 110 EFLKENNFQPYPLPH-VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH 168

Query: 326 FGLSRRI 332
                + 
Sbjct: 169 KSCEEKS 175

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A* Length = 384

 Score = 45.6 bits (108), Expect = 9e-05
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            P + +    I V + + +  +C A G PKP  +W K
Sbjct: 295 QPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLK 331

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A* Length = 384

 Score = 44.8 bits (106), Expect = 2e-04
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 887 SRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
              +       + P T+P   G  ++++C A+G P P I W +  
Sbjct: 199 VMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRAD 243

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A* Length = 384

 Score = 42.5 bits (100), Expect = 7e-04
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 891 GHAPFFREKPITIPVVI---GDKLEMKCLAVGEPKPVIQWFKLGT 932
           G  P F ++P  +   +     K+++ C   G PKP I+W   GT
Sbjct: 3   GSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGT 47

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 45.3 bits (108), Expect = 9e-05
 Identities = 38/175 (21%), Positives = 63/175 (36%), Gaps = 36/175 (20%)

Query: 187 FGDELGRGVTGIVYHA-----VERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQL-CH 239
            G  LGRG  G V  A      + ++ R  A K++  G  +       +EL I+  +  H
Sbjct: 31  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90

Query: 240 RNLVRLHDSYETKDS-FTIISELAGGGELLHSL----------------TRQSYYTEYDI 282
            N+V L  +         +I E    G L   L                  + + T   +
Sbjct: 91  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150

Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
             Y  Q+  G++++      H      DL     L++      + + DFGL+R I
Sbjct: 151 ICYSFQVAKGMEFLASRKCIH-----RDLAARNILLSE--KNVVKICDFGLARDI 198

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 44.9 bits (107), Expect = 9e-05
 Identities = 36/180 (20%), Positives = 60/180 (33%), Gaps = 45/180 (25%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY-----AAKVMTGKGNQYKSLFKNELDIMNQLCHRN 241
              ELG G  G V+ A   +          A K +       +  F+ E +++  L H +
Sbjct: 19  LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSL----------------TRQSYYTEYDIAHY 285
           +V+ +      D   ++ E    G+L   L                  +       + H 
Sbjct: 79  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138

Query: 286 IRQLLSGLDYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRITS 334
             Q+ SG+ Y+      HR           DL     LV       + + DFG+SR + S
Sbjct: 139 ASQIASGMVYLASQHFVHR-----------DLATRNCLVGA--NLLVKIGDFGMSRDVYS 185

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 Length = 395

 Score = 45.3 bits (107), Expect = 1e-04
 Identities = 8/40 (20%), Positives = 13/40 (32%)

Query: 892 HAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
             P  +     +    GD   + C+    P     +FK G
Sbjct: 211 GEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNG 250

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 Length = 395

 Score = 44.5 bits (105), Expect = 2e-04
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 893 APFFREKPI-TIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           AP + +KP   I V  G  + + C   G P P + W  
Sbjct: 308 APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSH 345

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A* Length = 388

 Score = 45.3 bits (107), Expect = 1e-04
 Identities = 9/37 (24%), Positives = 11/37 (29%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
               +  P T  V  G      C   G P   + W K
Sbjct: 307 PLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMK 343

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score = 44.4 bits (105), Expect = 1e-04
 Identities = 15/78 (19%), Positives = 29/78 (37%)

Query: 1093 WITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEP 1152
               L +N  +    +++L+    Y + + A+N  GW  +        T+ + P  +   P
Sbjct: 150  KKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSIPIIP 209

Query: 1153 IFPQTDVWSAGVLAYVLL 1170
              P  D  S       L+
Sbjct: 210  DIPIVDAQSGEDYDSFLM 227

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A Length = 214

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 14/55 (25%), Positives = 23/55 (41%)

Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWS 1161
            V DLK +  Y FR+ A      +++   SA F  +  A       P   + + +S
Sbjct: 74   VTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYS 128

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 45.0 bits (107), Expect = 1e-04
 Identities = 28/162 (17%), Positives = 58/162 (35%), Gaps = 13/162 (8%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAA-KVMTGKGNQ-YKSLFKNELDIMNQLC 238
           ++  Y+  D LG G  G V   ++  +G  + A K++  K    Y    ++E+ ++  L 
Sbjct: 12  LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV--KNVDRYCEAARSEIQVLEHLN 69

Query: 239 HR------NLVRLHDSYETKDSFTIISELAGGG--ELLHSLTRQSYYTEYDIAHYIRQLL 290
                     V++ + +E      I+ EL G    + +        +    I     Q+ 
Sbjct: 70  TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKE-NGFLPFRLDHIRKMAYQIC 128

Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
             ++++H   + H  L P ++L                  R 
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 10/55 (18%), Positives = 21/55 (38%)

Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
               T+  +    ++ ++ L+  ++Y   L A N  G       SA  ++    P 
Sbjct: 60   YAETVRVDSKQRYYSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSITSGPS 114

>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C Length = 231

 Score = 44.1 bits (104), Expect = 1e-04
 Identities = 13/79 (16%), Positives = 19/79 (24%)

Query: 885 IESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPT 944
           +  R           P     V+G  +E  C    + +P IQW K               
Sbjct: 110 VVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLP 169

Query: 945 THKDAYCVTSVLDGLQYLH 963
             K            + L 
Sbjct: 170 YLKVLKHSGINSSNAEVLA 188

>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C Length = 231

 Score = 43.7 bits (103), Expect = 1e-04
 Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 4/50 (8%)

Query: 886 ESRRDGHAPFF----REKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
           E+  +  AP++    + +     V   + ++ +C A G P P ++W K G
Sbjct: 8   ENSNNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNG 57

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 44.5 bits (106), Expect = 1e-04
 Identities = 36/179 (20%), Positives = 60/179 (33%), Gaps = 46/179 (25%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNY-----AAKVM-TGKGNQYKSLFKNELDIMNQLCHR 240
           F +ELG    G VY                A K +        +  F++E  +  +L H 
Sbjct: 13  FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSL----------------TRQSYYTEYDIAH 284
           N+V L          ++I      G+L   L                T +S     D  H
Sbjct: 73  NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132

Query: 285 YIRQLLSGLDYM------HRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRRI 332
            + Q+ +G++Y+      H+           DL     LV      ++ ++D GL R +
Sbjct: 133 LVAQIAAGMEYLSSHHVVHK-----------DLATRNVLVYD--KLNVKISDLGLFREV 178

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 44.5 bits (106), Expect = 1e-04
 Identities = 40/181 (22%), Positives = 65/181 (35%), Gaps = 42/181 (23%)

Query: 187 FGDELGRGVTGIVYHA-VERSSGRNYAAKV---MTGKG--NQYKSLFKNELDIMNQLCHR 240
            G  LG G  G V  A      GR     V   M  +           +E +++ Q+ H 
Sbjct: 27  LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSL------------------------TRQSY 276
           ++++L+ +        +I E A  G L   L                          +  
Sbjct: 87  HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146

Query: 277 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRR 331
            T  D+  +  Q+  G+ Y+  + + H      DL     LVA   GR + ++DFGLSR 
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVH-----RDLAARNILVAE--GRKMKISDFGLSRD 199

Query: 332 I 332
           +
Sbjct: 200 V 200

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus} Length = 403

 Score = 44.8 bits (106), Expect = 1e-04
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
            P+F   P  +       +E +C   G+P P + W K
Sbjct: 312 PPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMK 348

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus} Length = 403

 Score = 44.4 bits (105), Expect = 2e-04
 Identities = 8/39 (20%), Positives = 16/39 (41%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLG 931
             +F ++P  +  + G    ++C   G P P   W +  
Sbjct: 221 QLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGE 259

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus} Length = 403

 Score = 44.1 bits (104), Expect = 2e-04
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
              F  +  +I   +GD + +KC  +G+P P I W K
Sbjct: 121 PLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQK 157

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 44.5 bits (105), Expect = 2e-04
 Identities = 25/119 (21%), Positives = 37/119 (31%), Gaps = 9/119 (7%)

Query: 187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK------GNQYKSLFKNELDIMNQL-CH 239
            G  LGRG  G V  A      +    + +  K       +       +EL I+  +  H
Sbjct: 26  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85

Query: 240 RNLVRLH-DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
            N+V L     +      +I E    G L   L R              +   G DY+ 
Sbjct: 86  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKTKGARFRQGKDYVG 143

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 44.2 bits (105), Expect = 2e-04
 Identities = 43/181 (23%), Positives = 68/181 (37%), Gaps = 42/181 (23%)

Query: 187 FGDELGRGVTGIVYHA-----VERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQL-CH 239
           FG  LG G  G V +A      +       A K++     +  +    +EL +M QL  H
Sbjct: 49  FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSL-----------------------TRQSY 276
            N+V L  +        +I E    G+LL+ L                          + 
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168

Query: 277 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDL-----LVAHPGGRHLLLTDFGLSRR 331
            T  D+  +  Q+  G++++   S  H      DL     LV H  G+ + + DFGL+R 
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVH-----RDLAARNVLVTH--GKVVKICDFGLARD 221

Query: 332 I 332
           I
Sbjct: 222 I 222

>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens} Length = 312

 Score = 43.8 bits (103), Expect = 2e-04
 Identities = 10/39 (25%), Positives = 14/39 (35%), Gaps = 1/39 (2%)

Query: 891 GHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           G  PF +E  + +       L  +C     PK    W K
Sbjct: 1   GIDPFTKEVVVNVDDDGVISLNFEC-DKMTPKSEFSWSK 38

>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 891 GHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           G +     +  +  V  GD L+++C    +    I W +
Sbjct: 1   GSSGSSGVEVESFLVHPGDLLQLRCRLRDDV-QSINWLR 38

>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens} Length = 423

 Score = 43.9 bits (103), Expect = 3e-04
 Identities = 6/83 (7%), Positives = 21/83 (25%), Gaps = 11/83 (13%)

Query: 851 NRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDK 910
           ++ N      + +   +            E+   +       +     +   + V +   
Sbjct: 17  HKNNDSSVGKSSSYPMV-----------SESPEDLGCALRPQSSGTVYEAAAVEVDVSAS 65

Query: 911 LEMKCLAVGEPKPVIQWFKLGTS 933
           + ++ L          W    +S
Sbjct: 66  ITLQVLVDAPGNISCLWVFKHSS 88

>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4 Length = 212

 Score = 42.6 bits (100), Expect = 3e-04
 Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFKLGT 932
            P      +   V IG++  + C    G P     WFK G 
Sbjct: 104 PPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGI 144

>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A Length = 108

 Score = 40.4 bits (94), Expect = 3e-04
 Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 3/40 (7%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEP---KPVIQWFK 929
              F  +P    V +G  +       G      PV++WFK
Sbjct: 4   IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFK 43

>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G Length = 209

 Score = 42.6 bits (100), Expect = 3e-04
 Identities = 11/40 (27%), Positives = 14/40 (35%), Gaps = 1/40 (2%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAV-GEPKPVIQWFKLG 931
            P      I     IG++  + C    G P     WFK G
Sbjct: 107 PPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDG 146

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 43.3 bits (103), Expect = 3e-04
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC 238
           +  T+ +D    +G GV G VY  V    G   A K  T + +Q    F+ E++ ++   
Sbjct: 35  EEATNNFDHKFLIGHGVFGKVYKGV-LRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93

Query: 239 HRNLVRL 245
           H +LV L
Sbjct: 94  HPHLVSL 100

>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens} Length = 195

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPV-IQWFK 929
            P+F E+P    V       + C A G P+PV + W +
Sbjct: 106 LPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQ 143

>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens} Length = 289

 Score = 43.2 bits (101), Expect = 4e-04
 Identities = 13/79 (16%), Positives = 27/79 (34%)

Query: 878 HVEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCY 937
            V++DA    R    +       +   V  G+ + + C+ +G      +W      +   
Sbjct: 166 EVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRL 225

Query: 938 LPIVIPTTHKDAYCVTSVL 956
           +  V        Y + S+L
Sbjct: 226 VEPVTDFLLDMPYHIRSIL 244

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens} Length = 527

 Score = 43.5 bits (102), Expect = 4e-04
 Identities = 5/55 (9%), Positives = 15/55 (27%)

Query: 879 VEADALIESRRDGHAPFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTS 933
            E+   +       +     +   + V +   + ++ L          W    +S
Sbjct: 34  SESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSS 88

>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R Length = 315

 Score = 42.8 bits (100), Expect = 5e-04
 Identities = 14/104 (13%), Positives = 29/104 (27%), Gaps = 8/104 (7%)

Query: 872 GTRPEAHVEADALIESRRDGHAP-FFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKL 930
           G +       + +         P        T+ V +G ++++ C   G+   +  W   
Sbjct: 187 GKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWN 246

Query: 931 GTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEP 974
           G+        +            SV +         +  LNI  
Sbjct: 247 GSV-------IDEDDPVLGEDYYSVENPANKRRSTLITVLNISE 283

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 42.2 bits (100), Expect = 7e-04
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHR 240
           +D +   + LGRG  G VY     + G   A K +  +  Q  +  F+ E+++++   HR
Sbjct: 29  SDNFSNKNILGRGGFGKVYKGR-LADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 87

Query: 241 NLVRLH 246
           NL+RL 
Sbjct: 88  NLLRLR 93

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106

 Score = 39.6 bits (93), Expect = 7e-04
 Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 1/39 (2%)

Query: 1107 VKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
            +K L   T Y  R+ A +V+G            T   + 
Sbjct: 65   IKGLSPATTYYCRVQALSVVGAGPFS-EVVACVTPPSSG 102

>2ch8_A BARF1, P33, 33 kDa early protein; viral protein, immunoglobulin domain, oncogene; HET: NAG MAN; 2.3A {Epstein-barr virus} Length = 201

 Score = 41.2 bits (96), Expect = 8e-04
 Identities = 14/94 (14%), Positives = 26/94 (27%), Gaps = 12/94 (12%)

Query: 845 IDDERRNRINKYGAADTYTLR----RLRHE-----IGTRPEAHVEADALIESRRDGHAPF 895
           I+   R   + + +A+T+ L      + H+          E  V     +   +      
Sbjct: 50  IEWPFRGFFDIHRSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVK---PLT 106

Query: 896 FREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
                          L + C     P P +QW  
Sbjct: 107 LSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLM 140

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	1310
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.98
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.98
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.98
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.98
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.98
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.98
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.98
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.98
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.98
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.98
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.98
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.98
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.98
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.98
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.98
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.97
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.97
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.97
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.97
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.97
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.97
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.97
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.97
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.97
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.97
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.97
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.97
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.97
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.97
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.97
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.97
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.97
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.97
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.97
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.97
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.97
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.97
3bhy_A	283	Death-associated protein kinase 3; death associate	99.97
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.97
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.97
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.97
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.97
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.97
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.97
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.97
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.97
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.97
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.97
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.97
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.97
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.97
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.97
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.97
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.97
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.97
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.97
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.97
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.97
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.97
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.97
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.97
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.97
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.97
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.97
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.97
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.97
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.97
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.97
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.97
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.97
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.97
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.97
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.97
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.97
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.97
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.97
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.97
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.97
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.97
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.97
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.97
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.97
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.97
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.97
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.97
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.97
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.97
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.97
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.97
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.97
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.97
3niz_A	311	Rhodanese family protein; structural genomics, str	99.96
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.96
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.96
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.96
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.96
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.96
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.96
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.96
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.96
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.96
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.96
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.96
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.96
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.96
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.96
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.96
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.96
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.96
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.96
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.96
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.96
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.96
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.96
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.96
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.96
3bhy_A	283	Death-associated protein kinase 3; death associate	99.96
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.96
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.96
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.96
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.96
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.96
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.96
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.96
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.96
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.96
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.96
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.96
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.96
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.96
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.96
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.96
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.96
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.96
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.96
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.96
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.96
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.96
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.96
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.96
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.96
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.96
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.96
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.96
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.96
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.96
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.96
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.96
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.96
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.96
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.96
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.96
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.96
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.95
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.95
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.95
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.95
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.95
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.95
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.95
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.95
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.95
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.95
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.95
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.95
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.95
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.95
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.95
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.95
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.95
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.95
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.95
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.95
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.95
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.95
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.95
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.95
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.95
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.95
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.95
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.95
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.95
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.95
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.95
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.95
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.95
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.95
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.95
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.95
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.95
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.95
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.95
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.95
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.95
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.95
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.95
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.95
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.95
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.95
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.95
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.95
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.95
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.95
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.95
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.95
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.95
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.95
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.95
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.95
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.95
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.95
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.95
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.95
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.95
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.95
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.95
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.95
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.95
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.95
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.95
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.95
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.95
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.95
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.95
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.95
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.95
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.95
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.95
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.94
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.94
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.94
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.94
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.94
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.94
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.94
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.94
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.94
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.94
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.94
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.94
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.94
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.94
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.94
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.94
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.94
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.94
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.94
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.94
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.94
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.94
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.94
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.94
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.94
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.94
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.94
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.94
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.94
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.94
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.94
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.94
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.94
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.94
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.94
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.94
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.94
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.94
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.94
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.94
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.94
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.94
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.94
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.94
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.94
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.94
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.94
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.94
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.94
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.94
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.94
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.94
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.94
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.94
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.94
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.94
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.94
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.94
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.94
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.94
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.94
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.94
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.94
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.94
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.94
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.94
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.94
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.94
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.94
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.94
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.94
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.93
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.93
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.93
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.93
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.93
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.93
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.93
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.93
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.93
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.93
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.93
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.93
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.93
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.93
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.93
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.93
3uqc_A	286	Probable conserved transmembrane protein; structur	99.93
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.93
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.93
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.93
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.93
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.93
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.93
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.93
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.93
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.93
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.93
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.93
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.93
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.93
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.93
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.93
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.93
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.93
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.93
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.93
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.93
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.93
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.93
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.93
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.93
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.93
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.93
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.93
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.93
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.93
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.93
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.93
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.93
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.93
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.93
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.93
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.93
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.93
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.93
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.93
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.93
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.92
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.92
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.92
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.92
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.92
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.92
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.92
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.92
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.92
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.92
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.92
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.92
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.92
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.92
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.92
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.92
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.92
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.92
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.92
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.92
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.92
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.92
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.92
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.92
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.92
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.91
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.91
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.91
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.91
3uqc_A	286	Probable conserved transmembrane protein; structur	99.91
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.91
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.9
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.9

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=8.9e-46  Score=450.59  Aligned_cols=377  Identities=20%  Similarity=0.266  Sum_probs=261.8

Q ss_pred             EEEEEecCCCCcccccccccccccccCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeee
Q psy5279          27 VTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVE  106 (1310)
Q Consensus        27 ~s~~v~~~p~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~  106 (1310)
                      +.|+++.+|+||.. |.+  ..+ +.++..++|--+.+++|+.++||++|.++.+++  .|.++..   +..+.+++..+
T Consensus         2 ~~v~~~~~P~pP~~-P~v--~~~-~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~--~W~~v~~---~~~t~~~V~~L   72 (573)
T 3uto_A            2 AMVADVPEPEPPRF-PII--ENI-LDEAVILSWKPPALDGGSLVTNYTIEKREAMGG--SWSPCAK---SRYTYTTIEGL   72 (573)
T ss_dssp             ------CCCCCCEE-EEE--EEE-CSSCEEEEEECCSCCSSSCCCEEEEEEEESSSC--CCEEEEE---ESSSEEEECCC
T ss_pred             CccccCCCCccCCC-CEE--EEe-eCCEEEEEECCCCcCCCCcccEEEEEEEECCCC--ceEEecc---ccCCEEEeCCC
Confidence            45677778888854 445  234 566667888888899999999999999987654  3444432   34566899999


Q ss_pred             cCCceeEEEEeecCccccccCCccccccccCCccccc-cccceecee-EEee----ecCcccccc--hhcccccceeccc
Q psy5279         107 DNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRG-VTGTISHSV-TVHV----EDNENEYSY--RTYARGRQVKTRT  178 (1310)
Q Consensus       107 ~~~~~y~frt~~~n~~~~~~~~~~~~~~~~g~~iG~G-~~g~is~~~-~i~v----~~~~~~~s~--~~~~~~~~~~~~~  178 (1310)
                      .+...|.|||+|.|..+.+.+...+......+..... ......... ....    .........  .............
T Consensus        73 ~~g~~Y~FRV~A~N~~G~s~PS~~s~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (573)
T 3uto_A           73 RAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKH  152 (573)
T ss_dssp             CTTCEEEEEEEEEETTEECCCCCCCCCEECC-------CCCEECSSSCEECCCCCCCSCGGGGCCCHHHHCCCCCCCCBS
T ss_pred             CCCCcEeEEEEEEcCceEcCCcCCCCCEEcCCCCcccccccccccccccccccccccccccccccccccccCCcccccCC
Confidence            9999999999999987766554433332211110000 000000000 0000    000000000  0000011112223


Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ..+.++|++.+.||+|+||+||+|.++.||+.||||++........+.+.+|+.+|+.|+|||||+|+++|++++.+|||
T Consensus       153 ~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv  232 (573)
T 3uto_A          153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI  232 (573)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred             CcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence            34568999999999999999999999999999999999876666677889999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         259 SELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      ||||+||+|++++... +.++|.+++.|++||+.||+|||++||+||||||+|||++.+....+||+|||+|+.+.....
T Consensus       233 ~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~  312 (573)
T 3uto_A          233 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS  312 (573)
T ss_dssp             EECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred             EeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence            9999999999998654 569999999999999999999999999999999999999876556899999999999988777


Q ss_pred             CCCcccchHHHhhh-------------------------cCCCccccCCCCC----CCCCCCcchhhhhhhcccchhhch
Q psy5279         338 LNPLEYDVRYVRQA-------------------------LRHPWLNFADRKP----TEDTPKLNTDALRNYYNLYKDWYG  388 (1310)
Q Consensus       338 l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~~D~~~  388 (1310)
                      +.+.|||+.|+++.                         +..||........    ....+.+.......+...++|++.
T Consensus       313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~  392 (573)
T 3uto_A          313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR  392 (573)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHH
T ss_pred             eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHH
Confidence            77889998887642                         2233322110000    000011111222334445577777


Q ss_pred             hhhhhhcccCCCCCCccCCCccee
Q psy5279         389 NAAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       389 ~~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      ..+..+..+|+++.++|.|||+..
T Consensus       393 ~~L~~dp~~R~t~~e~l~Hpw~~~  416 (573)
T 3uto_A          393 KLLLADPNTRMTIHQALEHPWLTP  416 (573)
T ss_dssp             TTSCSSGGGSCCHHHHHHSTTTSC
T ss_pred             HHccCChhHCcCHHHHhcCcCcCC
Confidence            777888999999999999999753

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=2.6e-46  Score=424.32  Aligned_cols=97  Identities=23%  Similarity=0.325  Sum_probs=83.1

Q ss_pred             CcchhhhhhccccchhhhHHHHhhccccceeeeecccC----cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS----HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      +.|+++..|-+|.||+|.+|..+. |++.||.|++.-.    .+....+.+|.+.|++|+|+||..|+++|...    +.
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~-~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----~~  106 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELA-TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD----EK  106 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS----SE
T ss_pred             cccEEEEEEecccCeEEEEEEECC-CCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC----CE
Confidence            569999999999999999998887 8999999999743    45567899999999999999999999999876    56


Q ss_pred             hhHHHHhhcCchhhhhhhccccchhh
Q psy5279         672 AVLVMEKLQGADVLSYLSSRHEYTEQ  697 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~~~~~~~~~  697 (1310)
                      ..||||||.|.|+..+|..+..++|.
T Consensus       107 ~yivmEy~~gG~L~~~i~~~~~l~e~  132 (311)
T 4aw0_A          107 LYFGLSYAKNGELLKYIRKIGSFDET  132 (311)
T ss_dssp             EEEEECCCTTEEHHHHHHHHSSCCHH
T ss_pred             EEEEEecCCCCCHHHHHHHcCCCCHH
Confidence            78999999999998887554444443

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.3e-45  Score=409.93  Aligned_cols=97  Identities=28%  Similarity=0.463  Sum_probs=76.7

Q ss_pred             CcchhhhhhccccchhhhHHHHhhccccceeeeecccC----cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS----HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      ++|+++.+|-+|.||+|.+|..+. |++.||.|++.-.    .+....+.+|...|++|+||||..++++|...    +.
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~----~~   87 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTT-TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK----DE   87 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTT-TCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS----SE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECC-CCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC----CE
Confidence            579999999999999999998776 8999999998643    23456788999999999999999999999876    56


Q ss_pred             hhHHHHhhcCchhhhhhhccccchhhh
Q psy5279         672 AVLVMEKLQGADVLSYLSSRHEYTEQN  698 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  698 (1310)
                      ..+||||| |.|++.+|..+..++|++
T Consensus        88 ~~ivmEy~-~g~L~~~l~~~~~l~e~~  113 (275)
T 3hyh_A           88 IIMVIEYA-GNELFDYIVQRDKMSEQE  113 (275)
T ss_dssp             EEEEEECC-CEEHHHHHHHSCSCCHHH
T ss_pred             EEEEEeCC-CCCHHHHHHHcCCCCHHH
Confidence            78999999 669888876655555443

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=6.8e-45  Score=418.22  Aligned_cols=203  Identities=24%  Similarity=0.410  Sum_probs=167.6

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCc-chhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchh
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH-DTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIA  672 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  672 (1310)
                      |.+.|+++.+|-+|.||+|.+|..+. |+..||.|.+.... +....+..|...|++|+|+||..|+++|...    +..
T Consensus        72 p~~~y~~~~~iG~G~fG~V~~a~~~~-tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~----~~~  146 (346)
T 4fih_A           72 PRSYLDNFIKIGEGSTGIVCIATVRS-SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG----DEL  146 (346)
T ss_dssp             GGGTEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEET----TEE
T ss_pred             hhHhcEEeEEeecCcCeEEEEEEECC-CCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC----CEE
Confidence            45679999999999999999998876 89999999997654 3456788999999999999999999999866    567


Q ss_pred             hHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccccccccC
Q psy5279         673 VLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWED  752 (1310)
Q Consensus       673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  752 (1310)
                      .||||||.|.++..++. +..++|+.                                                      
T Consensus       147 ~ivmEy~~gg~L~~~l~-~~~l~e~~------------------------------------------------------  171 (346)
T 4fih_A          147 WVVMEFLEGGALTDIVT-HTRMNEEQ------------------------------------------------------  171 (346)
T ss_dssp             EEEECCCTTEEHHHHHH-HSCCCHHH------------------------------------------------------
T ss_pred             EEEEeCCCCCcHHHHHH-cCCCCHHH------------------------------------------------------
Confidence            89999999998766542 12222222                                                      


Q ss_pred             CCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcchhh
Q psy5279         753 NVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVIR  832 (1310)
Q Consensus       753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  832 (1310)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (346)
T 4fih_A          172 --------------------------------------------------------------------------------  171 (346)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEE
Q psy5279         833 ERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLE  912 (1310)
Q Consensus       833 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~  912 (1310)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (346)
T 4fih_A          172 --------------------------------------------------------------------------------  171 (346)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEee
Q psy5279         913 MKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDL  992 (1310)
Q Consensus       913 ~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DF  992 (1310)
                                                         ++.++.||+.||+|||++|||||||||+|||++.  ++.|||+||
T Consensus       172 -----------------------------------~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~--~g~vKl~DF  214 (346)
T 4fih_A          172 -----------------------------------IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH--DGRVKLSDF  214 (346)
T ss_dssp             -----------------------------------HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TCCEEECCC
T ss_pred             -----------------------------------HHHHHHHHHHHHHHHHHCCcccccCCHHHEEECC--CCCEEEecC
Confidence                                               3455679999999999999999999999999985  567999999


Q ss_pred             ccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279         993 GCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus       993 GlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      |+|+.+...... ....+|||.|||||++.+.+|+.++|||||||++|+|++|.+||.+.+.
T Consensus       215 Gla~~~~~~~~~-~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~  275 (346)
T 4fih_A          215 GFCAQVSKEVPR-RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP  275 (346)
T ss_dssp             TTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             cCceecCCCCCc-ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH
Confidence            999876543322 2345688999999999988899999999999999999999999976544

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=4.4e-44  Score=421.16  Aligned_cols=203  Identities=24%  Similarity=0.410  Sum_probs=168.1

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcc-hhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchh
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-TLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIA  672 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  672 (1310)
                      |.+.|.++.+|-+|.||+|.+|..+. |+..||.|.+..... ....+..|...|+.|+|+||..|+++|...    +..
T Consensus       149 p~~~y~~~~~iG~G~fG~V~~a~~~~-tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~----~~~  223 (423)
T 4fie_A          149 PRSYLDNFIKIGEGSTGIVCIATVRS-SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG----DEL  223 (423)
T ss_dssp             GGGTEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEET----TEE
T ss_pred             hhHhcEeeeEeccCcCcEEEEEEECC-CCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEEC----CEE
Confidence            56789999999999999999998887 899999999976543 455688999999999999999999999866    567


Q ss_pred             hHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccccccccC
Q psy5279         673 VLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWED  752 (1310)
Q Consensus       673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  752 (1310)
                      .||||||.|.++..++.. ..++|.                                                       
T Consensus       224 ~iVmEy~~gG~L~~~i~~-~~l~e~-------------------------------------------------------  247 (423)
T 4fie_A          224 WVVMEFLEGGALTDIVTH-TRMNEE-------------------------------------------------------  247 (423)
T ss_dssp             EEEEECCTTEEHHHHHHH-SCCCHH-------------------------------------------------------
T ss_pred             EEEEeCCCCCcHHHHHhc-cCCCHH-------------------------------------------------------
Confidence            899999999987655421 112222                                                       


Q ss_pred             CCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcchhh
Q psy5279         753 NVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVIR  832 (1310)
Q Consensus       753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  832 (1310)
                                                                                                      
T Consensus       248 --------------------------------------------------------------------------------  247 (423)
T 4fie_A          248 --------------------------------------------------------------------------------  247 (423)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEE
Q psy5279         833 ERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLE  912 (1310)
Q Consensus       833 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~  912 (1310)
                                                                                                      
T Consensus       248 --------------------------------------------------------------------------------  247 (423)
T 4fie_A          248 --------------------------------------------------------------------------------  247 (423)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEee
Q psy5279         913 MKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDL  992 (1310)
Q Consensus       913 ~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DF  992 (1310)
                                                        .++.++.||+.||+|||++|||||||||+||||+.  ++.|||+||
T Consensus       248 ----------------------------------~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~--~g~vKl~DF  291 (423)
T 4fie_A          248 ----------------------------------QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH--DGRVKLSDF  291 (423)
T ss_dssp             ----------------------------------HHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECT--TCCEEECCC
T ss_pred             ----------------------------------HHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcC--CCCEEEecC
Confidence                                              23456779999999999999999999999999985  567999999


Q ss_pred             ccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279         993 GCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus       993 GlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      |+|+.+...... ....+|||.|||||++.+..|+.++|||||||++|+|++|.+||.+.+.
T Consensus       292 Gla~~~~~~~~~-~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~  352 (423)
T 4fie_A          292 GFCAQVSKEVPR-RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP  352 (423)
T ss_dssp             TTCEECCSSCCC-BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             ccceECCCCCcc-ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH
Confidence            999876543322 2334688999999999999999999999999999999999999976544

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3.6e-44  Score=405.62  Aligned_cols=104  Identities=25%  Similarity=0.444  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ++.++.||+.||+|||++|||||||||+|||++.  ++.+||+|||+|+....... .....+|||.|||||++.+.+|+
T Consensus       128 ~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~--~g~vKl~DFGla~~~~~~~~-~~~~~~GT~~YmAPE~~~~~~y~  204 (304)
T 3ubd_A          128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKESIDHEK-KAYSFCGTVEYMAPEVVNRRGHT  204 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECT--TSCEEEESSEEEEC-----C-CCCSCCCCGGGCCHHHHHTSCCC
T ss_pred             HHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcC--CCCEEecccccceeccCCCc-cccccccCcccCCHHHhccCCCC
Confidence            3455679999999999999999999999999985  56799999999986543222 22334688999999998877777


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      .++|||||||++|+|++|.+||.+.+.
T Consensus       205 ~~~DiwSlGvilyemltG~~PF~~~~~  231 (304)
T 3ubd_A          205 QSADWWSFGVLMFEMLTGTLPFQGKDR  231 (304)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             CCCcccchHHHHHHHHhCCCCCCCcCH
Confidence            777777777777777777777765543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.4e-43  Score=398.21  Aligned_cols=203  Identities=24%  Similarity=0.346  Sum_probs=163.5

Q ss_pred             CCcc-hhhhhhccccchhhhHHHHhhccccceeeeecccC---cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccc
Q psy5279         595 TDKY-QFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS---HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASN  670 (1310)
Q Consensus       595 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  670 (1310)
                      ..+| .|..+|-+|.||+|.+|..+. |+..||.|.+.-.   ......+.+|...|++|+||||..++++|.......+
T Consensus        24 ~gr~~~~~~~iG~G~fg~Vy~a~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~  102 (290)
T 3fpq_A           24 DGRFLKFDIEIGRGSFKTVYKGLDTE-TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK  102 (290)
T ss_dssp             TSSEEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEE
T ss_pred             CCceEEeeeEEecCcCcEEEEEEECC-CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCc
Confidence            3444 888999999999999987765 8899999998643   3456678899999999999999999999976655557


Q ss_pred             hhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccccccc
Q psy5279         671 IAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTW  750 (1310)
Q Consensus       671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  750 (1310)
                      ...||||||.|.++..+|..+..++|..                                                    
T Consensus       103 ~~~lvmEy~~gg~L~~~l~~~~~l~~~~----------------------------------------------------  130 (290)
T 3fpq_A          103 CIVLVTELMTSGTLKTYLKRFKVMKIKV----------------------------------------------------  130 (290)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHH----------------------------------------------------
T ss_pred             EEEEEEeCCCCCCHHHHHHhcCCCCHHH----------------------------------------------------
Confidence            7889999999999887775332222221                                                    


Q ss_pred             cCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcch
Q psy5279         751 EDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPV  830 (1310)
Q Consensus       751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  830 (1310)
                                                                                                      
T Consensus       131 --------------------------------------------------------------------------------  130 (290)
T 3fpq_A          131 --------------------------------------------------------------------------------  130 (290)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCE
Q psy5279         831 IRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDK  910 (1310)
Q Consensus       831 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~  910 (1310)
                                                                                                      
T Consensus       131 --------------------------------------------------------------------------------  130 (290)
T 3fpq_A          131 --------------------------------------------------------------------------------  130 (290)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCC--ceecccCCCcEEEeecCCCcEE
Q psy5279         911 LEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRG--LCHLNIEPDNVVMASVRSVQVK  988 (1310)
Q Consensus       911 l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~g--IVHRDLKPeNILl~~~~~~~VK  988 (1310)
                                                           +..++.||+.||+|||++|  ||||||||+|||+++ .++.+|
T Consensus       131 -------------------------------------~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~-~~g~vK  172 (290)
T 3fpq_A          131 -------------------------------------LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG-PTGSVK  172 (290)
T ss_dssp             -------------------------------------HHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESS-TTSCEE
T ss_pred             -------------------------------------HHHHHHHHHHHHHHHHHCCCCEEecccChhheeEEC-CCCCEE
Confidence                                                 3445679999999999999  999999999999974 245799


Q ss_pred             EEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279         989 LIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus       989 L~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      |+|||+|+.... ..  ....+|||.|||||++.+ .|+.++|||||||++|+|++|.+||.+.
T Consensus       173 l~DFGla~~~~~-~~--~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~  232 (290)
T 3fpq_A          173 IGDLGLATLKRA-SF--AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC  232 (290)
T ss_dssp             ECCTTGGGGCCT-TS--BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             EEeCcCCEeCCC-Cc--cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            999999975332 11  223468899999999865 5999999999999999999999999654

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=6.1e-44  Score=410.93  Aligned_cols=208  Identities=18%  Similarity=0.306  Sum_probs=164.4

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeecccC---cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS---HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      -++|+++.+|-+|.||+|.+|..+. +++.||.|.+...   .....++.+|...|++|+|+||..++++|...    +.
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~----~~   97 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTE-DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN----GS   97 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETT-TCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET----TE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECC-CCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEEC----CE
Confidence            3789999999999999999998776 8999999999754   34567788999999999999999999999765    56


Q ss_pred             hhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccccccccc
Q psy5279         672 AVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWE  751 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  751 (1310)
                      ..||||||.|.|+..+|..+...                                                         
T Consensus        98 ~yiVmEy~~gg~L~~~i~~~~~~---------------------------------------------------------  120 (350)
T 4b9d_A           98 LYIVMDYCEGGDLFKRINAQKGV---------------------------------------------------------  120 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHTTTC---------------------------------------------------------
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCC---------------------------------------------------------
Confidence            78999999999988776432100                                                         


Q ss_pred             CCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcchh
Q psy5279         752 DNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVI  831 (1310)
Q Consensus       752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  831 (1310)
                                                                                                      
T Consensus       121 --------------------------------------------------------------------------------  120 (350)
T 4b9d_A          121 --------------------------------------------------------------------------------  120 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEE
Q psy5279         832 RERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKL  911 (1310)
Q Consensus       832 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l  911 (1310)
                                                                                                      
T Consensus       121 --------------------------------------------------------------------------------  120 (350)
T 4b9d_A          121 --------------------------------------------------------------------------------  120 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEe
Q psy5279         912 EMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLID  991 (1310)
Q Consensus       912 ~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~D  991 (1310)
                                                    ...+..+..++.||+.||+|||++|||||||||+|||++.  ++.|||+|
T Consensus       121 ------------------------------~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~--~g~vKl~D  168 (350)
T 4b9d_A          121 ------------------------------LFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK--DGTVQLGD  168 (350)
T ss_dssp             ------------------------------CCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECT--TCCEEECS
T ss_pred             ------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC--CCCEEEcc
Confidence                                          0011224556789999999999999999999999999985  56799999


Q ss_pred             eccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279         992 LGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus       992 FGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ||+|+........ ....+|||.|||||++.+..|+.++|||||||++|+|++|.+||.+.+..++
T Consensus       169 FGla~~~~~~~~~-~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~  233 (350)
T 4b9d_A          169 FGIARVLNSTVEL-ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL  233 (350)
T ss_dssp             TTEESCCCHHHHH-HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             cccceeecCCccc-ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH
Confidence            9999866432211 1223578999999999999999999999999999999999999988765444

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=3e-43  Score=428.35  Aligned_cols=95  Identities=27%  Similarity=0.470  Sum_probs=82.8

Q ss_pred             CCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcc-hhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccc
Q psy5279         592 EPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-TLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASN  670 (1310)
Q Consensus       592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  670 (1310)
                      +...+.|+++.+|-+|.||+|.+|..+. |++.||+|++..... ....+..|...|+.|+|+||..|+++|...    +
T Consensus       153 ~~il~~Y~i~~~lG~G~fg~V~~~~~~~-tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~----~  227 (573)
T 3uto_A          153 DHVLDHYDIHEELGTGAFGVVHRVTERA-TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD----N  227 (573)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECS----S
T ss_pred             CcCccccEEEEEEeeccCeEEEEEEECC-CCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEEC----C
Confidence            3445789999999999999999998887 899999999876654 356788999999999999999999999876    6


Q ss_pred             hhhHHHHhhcCchhhhhhhcc
Q psy5279         671 IAVLVMEKLQGADVLSYLSSR  691 (1310)
Q Consensus       671 ~~~~~~~~~~~~~~~~~~~~~  691 (1310)
                      ...||||+|.|.|++.+|..+
T Consensus       228 ~~~iv~E~~~gg~L~~~i~~~  248 (573)
T 3uto_A          228 EMVMIYEFMSGGELFEKVADE  248 (573)
T ss_dssp             EEEEEEECCCCCBHHHHHTCT
T ss_pred             EEEEEEeecCCCcHHHHHHHh
Confidence            789999999999998887544

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=5.3e-43  Score=401.14  Aligned_cols=103  Identities=27%  Similarity=0.453  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc----cccCCCCCCcccccccccCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL----IHPINTPNPEFAAPEVLAEE 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~----~~~~~tGtp~Y~APEvl~~~ 1024 (1310)
                      ..++.||+.||+|||++|||||||||+|||++.++ ..+||+|||+|+.+...+..    .....+|||.|||||++.+.
T Consensus       153 ~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g-~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~  231 (336)
T 4g3f_A          153 LYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG-SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK  231 (336)
T ss_dssp             HHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTS-CCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCC-CEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCC
Confidence            44567999999999999999999999999997532 36999999999876543221    12234688999999999999


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      +|+.++|||||||++|+|++|.+||.+.
T Consensus       232 ~y~~~~DiwSlGvilyemltG~~Pf~~~  259 (336)
T 4g3f_A          232 PCDAKVDIWSSCCMMLHMLNGCHPWTQY  259 (336)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred             CCCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence            9999999999999999999999998654

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.7e-42  Score=403.23  Aligned_cols=112  Identities=21%  Similarity=0.369  Sum_probs=91.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC---cccccCCCCCCcccccccccCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG---TLIHPINTPNPEFAAPEVLAEE 1024 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g---~~~~~~~tGtp~Y~APEvl~~~ 1024 (1310)
                      +..+++||+.||+|||++|||||||||+|||++.  ++.+||+|||+|+.+....   .......+||+.|||||++.+.
T Consensus       160 ~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~--~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~  237 (398)
T 4b99_A          160 VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE--NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL  237 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT--TCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHCcCcCCCcCccccccCC--CCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCC
Confidence            3455679999999999999999999999999985  5679999999998653221   1122345688999999998876


Q ss_pred             -CCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhh
Q psy5279        1025 -PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061 (1310)
Q Consensus      1025 -~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I 1061 (1310)
                       .|+.++||||+||++|+|++|.+||.+.+..+....|
T Consensus       238 ~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I  275 (398)
T 4b99_A          238 HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI  275 (398)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHH
T ss_pred             CCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence             5689999999999999999999999998877665544

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.5e-41  Score=391.83  Aligned_cols=104  Identities=30%  Similarity=0.459  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-------------------------
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT------------------------- 1003 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~------------------------- 1003 (1310)
                      +.+++||+.||+|||++|||||||||+|||++. +.+.+||+|||+|+.......                         
T Consensus       120 ~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (361)
T 4f9c_A          120 REYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR-RLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLS  198 (361)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET-TTTEEEECCCTTCEECTTCSCGGGGGC-------------------
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeC-CCCeEEECcCCCCcccCCcccccccccccccccccccccccccccc
Confidence            345679999999999999999999999999975 235799999999975432110                         


Q ss_pred             --ccccCCCCCCcccccccccCC-CCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1004 --LIHPINTPNPEFAAPEVLAEE-PIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1004 --~~~~~~tGtp~Y~APEvl~~~-~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                        ......+|||.|||||++.+. .|+.++||||+||++|+|++|++||.+.+
T Consensus       199 ~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~  251 (361)
T 4f9c_A          199 RRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS  251 (361)
T ss_dssp             -------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred             ccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence              011224689999999999876 48899999999999999999999996543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=3.4e-40  Score=379.25  Aligned_cols=228  Identities=25%  Similarity=0.319  Sum_probs=183.2

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ..+.|++.++||+|+||+||+|+++.||+.||||++........+.+.+|+.+|++|+|||||+++++|.+++.+|||||
T Consensus        72 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE  151 (346)
T 4fih_A           72 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME  151 (346)
T ss_dssp             GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            45779999999999999999999999999999999986655566678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCCC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKLN  339 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l~  339 (1310)
                      ||+||+|.+.+.+ +.++|.+++.|++||+.||+|||++|||||||||+||||+.++  .|||+|||+|+.+... ...+
T Consensus       152 y~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g--~vKl~DFGla~~~~~~~~~~~  228 (346)
T 4fih_A          152 FLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG--RVKLSDFGFCAQVSKEVPRRK  228 (346)
T ss_dssp             CCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEECCCTTCEECCSSSCCBC
T ss_pred             CCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCC--CEEEecCcCceecCCCCCccc
Confidence            9999999998865 5799999999999999999999999999999999999998765  8999999999988654 4567


Q ss_pred             CcccchHHHhhh-------------------------cCCCccccCCCCCC----CCCCCcchhhhhhhcccchhhchhh
Q psy5279         340 PLEYDVRYVRQA-------------------------LRHPWLNFADRKPT----EDTPKLNTDALRNYYNLYKDWYGNA  390 (1310)
Q Consensus       340 ~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~----~~~p~~~~~~~~~~~~~~~D~~~~~  390 (1310)
                      +.|||+.|+++.                         +..||.........    .. ..........+...++|++...
T Consensus       229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~  307 (346)
T 4fih_A          229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LPPRLKNLHKVSPSLKGFLDRL  307 (346)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-SCCCCSCGGGSCHHHHHHHHHH
T ss_pred             ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcC-CCCCCCccccCCHHHHHHHHHH
Confidence            889999887753                         22233211000000    00 0000011112334456777777


Q ss_pred             hhhhcccCCCCCCccCCCccee
Q psy5279         391 AVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       391 ~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      +..+..+|+|+++++.|||+.-
T Consensus       308 L~~dP~~R~ta~e~l~Hp~~~~  329 (346)
T 4fih_A          308 LVRDPAQRATAAELLKHPFLAK  329 (346)
T ss_dssp             SCSSTTTSCCHHHHTTCGGGGG
T ss_pred             cCCChhHCcCHHHHhcCHhhcC
Confidence            8888999999999999999853

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.1e-40  Score=378.40  Aligned_cols=216  Identities=23%  Similarity=0.354  Sum_probs=180.4

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .++|++.+.||+|+||+||+|+++.||+.||||++.+..   ....+.+.+|+.+|++|+|||||+++++|++++.+|||
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv  110 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG  110 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            367999999999999999999999999999999997542   23456788999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC---
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF---  335 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~---  335 (1310)
                      ||||+||+|++.+.+.+.++|.+++.|++||+.||+|||++|||||||||+||||+.++  +|||+|||+|+.+...   
T Consensus       111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g--~vKl~DFGla~~~~~~~~~  188 (311)
T 4aw0_A          111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQ  188 (311)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS--CEEECCCTTCEECCTTTTC
T ss_pred             EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCC--CEEEEEcCCceecCCCCCc
Confidence            99999999999999888999999999999999999999999999999999999998765  8999999999988543   


Q ss_pred             CCCCCcccchHHHhhh-------------------------cCCCccccCCCCCCCCCCCcchhhhh-----------hh
Q psy5279         336 GKLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKPTEDTPKLNTDALR-----------NY  379 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~~~~p~~~~~~~~-----------~~  379 (1310)
                      ....+.|||+.|+++.                         ++.||-...           ..+.+.           .+
T Consensus       189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----------~~~~~~~i~~~~~~~p~~~  257 (311)
T 4aw0_A          189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-----------EGLIFAKIIKLEYDFPEKF  257 (311)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHTCCCCCTTC
T ss_pred             ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHcCCCCCCccc
Confidence            3456789999887642                         333442211           111111           23


Q ss_pred             cccchhhchhhhhhhcccCCCCCCc------cCCCcc
Q psy5279         380 YNLYKDWYGNAAVRRYYRRRPLNSC------YTHPSR  410 (1310)
Q Consensus       380 ~~~~~D~~~~~~l~~~~~r~~~~~c------l~hpw~  410 (1310)
                      +..++|++...+..+..+|++++++      +.|||.
T Consensus       258 s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F  294 (311)
T 4aw0_A          258 FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF  294 (311)
T ss_dssp             CHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGG
T ss_pred             CHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCc
Confidence            3455788888888889999999996      567775

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2e-39  Score=381.62  Aligned_cols=229  Identities=25%  Similarity=0.329  Sum_probs=184.1

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ...+.|++.++||+|+||+||+|+++.||+.||||++........+.+.+|+.+|+.|+|||||+++++|.+++.+||||
T Consensus       148 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm  227 (423)
T 4fie_A          148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM  227 (423)
T ss_dssp             CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ChhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence            34578999999999999999999999999999999998766666777899999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l  338 (1310)
                      |||+||+|.+.+.. +.++|.+++.|++||+.||+|||++|||||||||+||||+.++  .|||+|||+|+.+... ...
T Consensus       228 Ey~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g--~vKl~DFGla~~~~~~~~~~  304 (423)
T 4fie_A          228 EFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG--RVKLSDFGFCAQVSKEVPRR  304 (423)
T ss_dssp             ECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTC--CEEECCCTTCEECCSSCCCB
T ss_pred             eCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCC--CEEEecCccceECCCCCccc
Confidence            99999999998864 5699999999999999999999999999999999999998766  8999999999987654 456


Q ss_pred             CCcccchHHHhhh-------------------------cCCCccccCCCCCC----CCCCCcchhhhhhhcccchhhchh
Q psy5279         339 NPLEYDVRYVRQA-------------------------LRHPWLNFADRKPT----EDTPKLNTDALRNYYNLYKDWYGN  389 (1310)
Q Consensus       339 ~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~----~~~p~~~~~~~~~~~~~~~D~~~~  389 (1310)
                      ++.|||+.|+++.                         +..||.........    ...+ ........+...++|++..
T Consensus       305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~~  383 (423)
T 4fie_A          305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSLKGFLDR  383 (423)
T ss_dssp             CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-CCCSCTTSSCHHHHHHHHH
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCcccccCCHHHHHHHHH
Confidence            7889999887642                         22233211000000    0000 0000111223445777778


Q ss_pred             hhhhhcccCCCCCCccCCCccee
Q psy5279         390 AAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       390 ~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      .+..+..+|++++++|.|||+.-
T Consensus       384 ~L~~dP~~R~ta~ell~Hp~~~~  406 (423)
T 4fie_A          384 LLVRDPAQRATAAELLKHPFLAK  406 (423)
T ss_dssp             HSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             HcCCChhHCcCHHHHhcCHHhcC
Confidence            88888999999999999999854

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=4.7e-41  Score=378.51  Aligned_cols=98  Identities=21%  Similarity=0.392  Sum_probs=76.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-----------cccCCCCCCcccc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-----------IHPINTPNPEFAA 1017 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-----------~~~~~tGtp~Y~A 1017 (1310)
                      ..++.||++||+|||++|||||||||+|||++.  ++.+||+|||+|+........           .....+|||.|||
T Consensus       121 ~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~--~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmA  198 (299)
T 4g31_A          121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM--DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMS  198 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TCCEEECCCCCC--------------------------CCCTTSC
T ss_pred             HHHHHHHHHHHHHHHHCcCccccCcHHHeEECC--CCcEEEccCccceecCCCccccccccccccccccCCcccCccccC
Confidence            446789999999999999999999999999985  457999999999865432111           1123468999999


Q ss_pred             cccccCCCCCCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1018 PEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ||++.+..|+.++|||||||++|||++   ||.+
T Consensus       199 PE~~~~~~y~~~~DiwSlGvilyell~---Pf~~  229 (299)
T 4g31_A          199 PEQIHGNSYSHKVDIFSLGLILFELLY---PFST  229 (299)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             HHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC
Confidence            999999999999999999999999996   7753

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=4.9e-40  Score=366.96  Aligned_cols=225  Identities=20%  Similarity=0.286  Sum_probs=163.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|++.+.||+|+||+||+|.++.+|+.||||++.+..   ......+.+|+.+|+.|+|||||+++++|++++.+||||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            67999999999999999999999999999999997643   233567899999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN  339 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~  339 (1310)
                      ||| +|+|++.+.+.+.+++.+++.+++||+.||+|||++||+||||||+|||++.++  .+||+|||+|+........+
T Consensus        93 Ey~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~--~vkl~DFGla~~~~~~~~~~  169 (275)
T 3hyh_A           93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHL--NVKIADFGLSNIMTDGNFLK  169 (275)
T ss_dssp             ECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTC--CEEECCSSCC----------
T ss_pred             eCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCC--CEEEeecCCCeecCCCCccC
Confidence            999 689999999888999999999999999999999999999999999999998665  89999999999887777777


Q ss_pred             CcccchHHHhhhc--CCCccccC--------------CCCCCCCCCCcchhhhh-----------hhcccchhhchhhhh
Q psy5279         340 PLEYDVRYVRQAL--RHPWLNFA--------------DRKPTEDTPKLNTDALR-----------NYYNLYKDWYGNAAV  392 (1310)
Q Consensus       340 ~~~~t~~yv~~~~--r~P~l~~~--------------~~~~~~~~p~~~~~~~~-----------~~~~~~~D~~~~~~l  392 (1310)
                      +.|||+.|+++..  +.+..+..              ...+.+. .....+.+.           .+...++|.+...+.
T Consensus       170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~-~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~  248 (275)
T 3hyh_A          170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD-DESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLI  248 (275)
T ss_dssp             -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSC-CSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHSC
T ss_pred             CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcc
Confidence            8899988876531  11111000              0111111 001111111           112334566666777


Q ss_pred             hhcccCCCCCCccCCCcce
Q psy5279         393 RRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       393 ~~~~~r~~~~~cl~hpw~~  411 (1310)
                      .+..+|+|+++++.|||..
T Consensus       249 ~dP~~R~s~~eil~hpw~k  267 (275)
T 3hyh_A          249 VNPLNRISIHEIMQDDWFK  267 (275)
T ss_dssp             SSGGGSCCHHHHHHCHHHH
T ss_pred             CChhHCcCHHHHHcCcccc
Confidence            7789999999999999973

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2.6e-39  Score=372.51  Aligned_cols=215  Identities=20%  Similarity=0.305  Sum_probs=170.3

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+..  ....+.+.+|+.+|++|+|||||+++++|++++.+|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            68999999999999999999999999999999997653  2345678999999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-C
Q psy5279         261 LAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-K  337 (1310)
Q Consensus       261 y~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~  337 (1310)
                      ||+||+|++++...  ..++|.+++.|+.||+.||+|||++|||||||||+||||+.++  .|||+|||+|+.+.... .
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g--~vKl~DFGla~~~~~~~~~  181 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG--TVQLGDFGIARVLNSTVEL  181 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTC--CEEECSTTEESCCCHHHHH
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC--CEEEcccccceeecCCccc
Confidence            99999999999654  3479999999999999999999999999999999999998765  79999999999875432 2


Q ss_pred             CCCcccchHHHhhh-------------------------cCCCccccCCCCCCCCCCCcchhhhh------------hhc
Q psy5279         338 LNPLEYDVRYVRQA-------------------------LRHPWLNFADRKPTEDTPKLNTDALR------------NYY  380 (1310)
Q Consensus       338 l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~~~~p~~~~~~~~------------~~~  380 (1310)
                      .++.|||+.|+++.                         ++.||....           ..+.+.            .+.
T Consensus       182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----------~~~~~~~i~~~~~~~~~~~~s  250 (350)
T 4b9d_A          182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----------MKNLVLKIISGSFPPVSLHYS  250 (350)
T ss_dssp             HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----------HHHHHHHHHHTCCCCCCTTSC
T ss_pred             ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----------HHHHHHHHHcCCCCCCCccCC
Confidence            34567777666532                         233332211           111111            123


Q ss_pred             ccchhhchhhhhhhcccCCCCCCccCCCcc
Q psy5279         381 NLYKDWYGNAAVRRYYRRRPLNSCYTHPSR  410 (1310)
Q Consensus       381 ~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~  410 (1310)
                      ..++|++...+..+..+|+++++++.|||+
T Consensus       251 ~~~~~li~~~L~~dP~~R~s~~e~l~hp~~  280 (350)
T 4b9d_A          251 YDLRSLVSQLFKRNPRDRPSVNSILEKGFI  280 (350)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSHHH
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCHHh
Confidence            345677777788889999999999999996

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=8.1e-40  Score=402.50  Aligned_cols=99  Identities=26%  Similarity=0.429  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~y 1026 (1310)
                      +++++.||+.||+|||++|||||||||+||||+.  +++|||+|||+|+......   ....+|||.|||||++.+ .+|
T Consensus       294 a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~--~G~vKL~DFGlA~~~~~~~---~~t~~GTp~YmAPEvl~~~~~y  368 (689)
T 3v5w_A          294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE--HGHVRISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGVAY  368 (689)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECT--TSCEEECCCTTCEECSSCC---CCSCCSCGGGCCHHHHSTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCCchHHeEEeC--CCCEEecccceeeecCCCC---CCCccCCcCccCHHHHhCCCCC
Confidence            3456679999999999999999999999999985  5679999999998764322   223468899999999864 578


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      +.++|||||||++|+|++|.+||.+
T Consensus       369 ~~~vDiWSLGvilYEmLtG~~PF~~  393 (689)
T 3v5w_A          369 DSSADWFSLGCMLFKLLRGHSPFRQ  393 (689)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTCG
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            8888888888888888888888854

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=5.6e-38  Score=359.62  Aligned_cols=225  Identities=19%  Similarity=0.193  Sum_probs=172.9

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .+.|++.++||+|+||+||+|+++.||+.||||+++....     ..+|+.+|+.|+|||||+++++|.+++.+||||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            3568999999999999999999999999999999975432     24799999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC----
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK----  337 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~----  337 (1310)
                      |+||+|.+.+.+.+.+++.+++.|+.||+.||+|||++|||||||||+||||+.++ .+|||+|||+|+.+...+.    
T Consensus       132 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g-~~vKl~DFGla~~~~~~~~~~~~  210 (336)
T 4g3f_A          132 LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG-SRAALCDFGHALCLQPDGLGKSL  210 (336)
T ss_dssp             CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTS-CCEEECCCTTCEEC---------
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCC-CEEEEeeCCCCeEccCCCcccce
Confidence            99999999999888899999999999999999999999999999999999998664 3699999999998765432    


Q ss_pred             --CCCcccchHHHhhh-------------------------cCCCccccCCCCCCCC---CCCcchhhhhhhcccchhhc
Q psy5279         338 --LNPLEYDVRYVRQA-------------------------LRHPWLNFADRKPTED---TPKLNTDALRNYYNLYKDWY  387 (1310)
Q Consensus       338 --l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~~~---~p~~~~~~~~~~~~~~~D~~  387 (1310)
                        ....|||+.|+++.                         ++.||-..........   .+....+....+...++|++
T Consensus       211 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li  290 (336)
T 4g3f_A          211 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAI  290 (336)
T ss_dssp             ---CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHH
T ss_pred             ecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHH
Confidence              23468998887642                         3334432111100000   00000000112334456777


Q ss_pred             hhhhhhhcccCCCCCC-------------ccCCCccee
Q psy5279         388 GNAAVRRYYRRRPLNS-------------CYTHPSRMI  412 (1310)
Q Consensus       388 ~~~~l~~~~~r~~~~~-------------cl~hpw~~~  412 (1310)
                      ...+..+..+|+|+.+             .+.|||+.-
T Consensus       291 ~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~  328 (336)
T 4g3f_A          291 QEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGE  328 (336)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSS
T ss_pred             HHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCC
Confidence            7777788899999887             478999743

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.9e-38  Score=355.13  Aligned_cols=223  Identities=19%  Similarity=0.302  Sum_probs=171.7

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEe----CCeEEEE
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYET----KDSFTII  258 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~----~~~lyLV  258 (1310)
                      |++.++||+|+||+||+|.++.+++.||+|++....  ....+.+.+|+.+|++|+|||||+++++|++    ++.+|||
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            478889999999999999999999999999997543  2345678999999999999999999999976    3568999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC--eeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS--IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~g--IVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      ||||+||+|.+.+.+.+.+++..++.++.||+.||+|||++|  ||||||||+||||+.+. ..+||+|||+|+... .+
T Consensus       108 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~-g~vKl~DFGla~~~~-~~  185 (290)
T 3fpq_A          108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT-GSVKIGDLGLATLKR-AS  185 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTT-SCEEECCTTGGGGCC-TT
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCC-CCEEEEeCcCCEeCC-CC
Confidence            999999999999998888999999999999999999999999  99999999999997432 379999999998643 34


Q ss_pred             CCCCcccchHHHhhhc------------------------CCCccccCCCCCC---CCCCCcchhhh-hhhcccchhhch
Q psy5279         337 KLNPLEYDVRYVRQAL------------------------RHPWLNFADRKPT---EDTPKLNTDAL-RNYYNLYKDWYG  388 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~~------------------------r~P~l~~~~~~~~---~~~p~~~~~~~-~~~~~~~~D~~~  388 (1310)
                      ..++.|||+.|+++..                        +.||-........   ...+. .+..+ ......++|++.
T Consensus       186 ~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~li~  264 (290)
T 3fpq_A          186 FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV-KPASFDKVAIPEVKEIIE  264 (290)
T ss_dssp             SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC-CCGGGGGCCCHHHHHHHH
T ss_pred             ccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCC-CCCCCCccCCHHHHHHHH
Confidence            5667889987776431                        2222110000000   00000 00000 011123466677


Q ss_pred             hhhhhhcccCCCCCCccCCCcc
Q psy5279         389 NAAVRRYYRRRPLNSCYTHPSR  410 (1310)
Q Consensus       389 ~~~l~~~~~r~~~~~cl~hpw~  410 (1310)
                      ..+..+...|+|+++++.|||+
T Consensus       265 ~~L~~dP~~R~s~~e~l~Hp~~  286 (290)
T 3fpq_A          265 GCIRQNKDERYSIKDLLNHAFF  286 (290)
T ss_dssp             HHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHccCChhHCcCHHHHhcCccc
Confidence            7777788999999999999996

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3.6e-39  Score=364.81  Aligned_cols=216  Identities=24%  Similarity=0.334  Sum_probs=170.1

Q ss_pred             CCeeeeceecccCceEEEEEEEc---CCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVER---SSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k---~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ++|++.+.||+|+||+||+|++.   .+++.||||++++...  .....+.+|+.+|++|+|||||+++++|++++.+||
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            67999999999999999999984   5789999999975422  233467889999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~  336 (1310)
                      |||||+||+|++++.+.+.++|.+++.+++||+.||+|||++|||||||||+|||++.++  ++||+|||+|+.... ..
T Consensus       104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g--~vKl~DFGla~~~~~~~~  181 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKLTDFGLSKESIDHEK  181 (304)
T ss_dssp             EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTS--CEEEESSEEEEC-----C
T ss_pred             EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCC--CEEecccccceeccCCCc
Confidence            999999999999999888999999999999999999999999999999999999998765  899999999997644 34


Q ss_pred             CCCCcccchHHHhhh-------------------------cCCCccccCCCCCCCCCCCcchhhhh-----------hhc
Q psy5279         337 KLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKPTEDTPKLNTDALR-----------NYY  380 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~~~~p~~~~~~~~-----------~~~  380 (1310)
                      ...+.|||+.|+++.                         ++.||-..           ...+.+.           .+.
T Consensus       182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~-----------~~~~~~~~i~~~~~~~p~~~s  250 (304)
T 3ubd_A          182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK-----------DRKETMTMILKAKLGMPQFLS  250 (304)
T ss_dssp             CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHHHHHHHHCCCCCCTTSC
T ss_pred             cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc-----------CHHHHHHHHHcCCCCCCCcCC
Confidence            566789999887753                         22233211           1111111           123


Q ss_pred             ccchhhchhhhhhhcccCCCC-----CCccCCCcce
Q psy5279         381 NLYKDWYGNAAVRRYYRRRPL-----NSCYTHPSRM  411 (1310)
Q Consensus       381 ~~~~D~~~~~~l~~~~~r~~~-----~~cl~hpw~~  411 (1310)
                      ..++|++...+..+..+|+++     ++++.|||..
T Consensus       251 ~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~  286 (304)
T 3ubd_A          251 PEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFS  286 (304)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGT
T ss_pred             HHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCcccc
Confidence            345677777788889999985     5899999964

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=7.4e-39  Score=368.03  Aligned_cols=104  Identities=25%  Similarity=0.442  Sum_probs=86.1

Q ss_pred             cccCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcc-------hhhhhhHHhhhhhhhchhhHHHHHHh
Q psy5279         589 WSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLRSLRHERIASLLEA  661 (1310)
Q Consensus       589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  661 (1310)
                      +......+.|.+...|-+|.||+|.+|..+. ++..||.|++.....       ....+..|...|+.|+|+||..+++.
T Consensus         5 ~~~~~~~~~y~~~~~LG~G~fg~V~~~~~~~-~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~   83 (361)
T 2yab_A            5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDV   83 (361)
T ss_dssp             CBCSCGGGTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             ccCCChhhceEEeeEEeeCcCEEEEEEEECC-CCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEE
Confidence            3455667889999999999999999998876 889999999976543       34678899999999999999999999


Q ss_pred             cCCCCcccchhhHHHHhhcCchhhhhhhccccchhh
Q psy5279         662 YKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQ  697 (1310)
Q Consensus       662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  697 (1310)
                      |...    +...||||+|.|.++..++..+..++|.
T Consensus        84 ~~~~----~~~~lv~e~~~gg~L~~~l~~~~~l~~~  115 (361)
T 2yab_A           84 YENR----TDVVLILELVSGGELFDFLAQKESLSEE  115 (361)
T ss_dssp             EECS----SEEEEEEECCCSCBHHHHHTTCSCCBHH
T ss_pred             EEeC----CEEEEEEEcCCCCcHHHHHHhcCCCCHH
Confidence            9765    5678999999999988877654444443

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.1e-37  Score=361.91  Aligned_cols=168  Identities=24%  Similarity=0.390  Sum_probs=145.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeC-----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETK-----  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-----  252 (1310)
                      .+.++|++++.||+|+||+||+|+++.||+.||||+|++...  ...+.+.+|+.+|+.|+|||||++++++...     
T Consensus        51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~  130 (398)
T 4b99_A           51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGE  130 (398)
T ss_dssp             CCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTT
T ss_pred             CCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccccc
Confidence            356789999999999999999999999999999999975432  3345678999999999999999999998643     


Q ss_pred             -CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         253 -DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       253 -~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                       +.+|||||||. |+|++.+...+.+++.+++.|++||+.||+|||++|||||||||+|||++.++  .+||+|||+|+.
T Consensus       131 ~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~--~~Ki~DFGla~~  207 (398)
T 4b99_A          131 FKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC--ELKIGDFGMARG  207 (398)
T ss_dssp             CCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTC--CEEECCCTTCBC
T ss_pred             CCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCC--CEEEeecceeee
Confidence             67999999996 67999998888899999999999999999999999999999999999998765  899999999997


Q ss_pred             ecC-----CCCCCCcccchHHHhh
Q psy5279         332 ITS-----FGKLNPLEYDVRYVRQ  350 (1310)
Q Consensus       332 i~~-----~~~l~~~~~t~~yv~~  350 (1310)
                      +..     .....+.|||+.|+++
T Consensus       208 ~~~~~~~~~~~~~~~~GT~~Y~AP  231 (398)
T 4b99_A          208 LCTSPAEHQYFMTEYVATRWYRAP  231 (398)
T ss_dssp             C-------CCCCCSSCCCCTTCCH
T ss_pred             cccCccccccccccceeChHhcCH
Confidence            643     2345667888777654

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.2e-37  Score=367.83  Aligned_cols=99  Identities=22%  Similarity=0.390  Sum_probs=80.3

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeecccCc---chhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH---DTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      .+.|+++..|.+|.||+|.+|..+. ++..+|.|++....   .....+..|...|+.|+|+||..+++.|...    +.
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~-~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~----~~   84 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVL-AGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEE----GH   84 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETT-TTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECS----SE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECC-CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEEC----CE
Confidence            5689999999999999999998776 88999999987544   4456788999999999999999999998765    56


Q ss_pred             hhHHHHhhcCchhhhhhhccccchhhh
Q psy5279         672 AVLVMEKLQGADVLSYLSSRHEYTEQN  698 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  698 (1310)
                      ..+|||+|.|.++..++..+..++|.+
T Consensus        85 ~~lv~E~~~gg~L~~~i~~~~~~~e~~  111 (444)
T 3soa_A           85 HYLIFDLVTGGELFEDIVAREYYSEAD  111 (444)
T ss_dssp             EEEEECCCBCCBHHHHHHHCSCCCHHH
T ss_pred             EEEEEEeCCCCCHHHHHHHcCCCCHHH
Confidence            789999999999888776554444433

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=9.4e-38  Score=357.71  Aligned_cols=97  Identities=26%  Similarity=0.430  Sum_probs=80.7

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeecccC---cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS---HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      .+.|++...|.+|.||+|.+|..+. ++..||.|++...   ......+..|...|+.|+|+||..+++.|...    +.
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----~~  102 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKT-TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE----SF  102 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS----SE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECC-CCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC----CE
Confidence            4679999999999999999997765 8899999999654   34567788999999999999999999998765    56


Q ss_pred             hhHHHHhhcCchhhhhhhccccchh
Q psy5279         672 AVLVMEKLQGADVLSYLSSRHEYTE  696 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~~~~~~~~  696 (1310)
                      ..+|||+|.|.++..++..+..++|
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~~~~~~  127 (362)
T 2bdw_A          103 HYLVFDLVTGGELFEDIVAREFYSE  127 (362)
T ss_dssp             EEEEECCCCSCBHHHHHTTCSCCCH
T ss_pred             EEEEEecCCCCCHHHHHHHcCCCCH
Confidence            7899999999988777655444443

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=7.7e-37  Score=344.20  Aligned_cols=222  Identities=16%  Similarity=0.194  Sum_probs=159.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCC--------
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKD--------  253 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~--------  253 (1310)
                      ++|++.+.||+|+||+||+|+++.+|+.||||+++.... ...+.+.+|+.+|++|+|||||+++++|.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            458999999999999999999999999999999975443 34567889999999999999999999997655        


Q ss_pred             ----eEEEEEecCCCCchHHHhhhcCCC---CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEee
Q psy5279         254 ----SFTIISELAGGGELLHSLTRQSYY---TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF  326 (1310)
Q Consensus       254 ----~lyLVmEy~~GGeL~~~l~~~~~l---sE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDF  326 (1310)
                          .+|||||||+||+|.+.+.....+   .+..++.++.||++||+|||++|||||||||+||||+.++  .+||+||
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~--~vKl~DF  162 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD--VVKVGDF  162 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC--CEEECCC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCC--cEEEccC
Confidence                379999999999999999876554   4456889999999999999999999999999999998765  8999999


Q ss_pred             ccceeecCCC-------------CCCCcccchHHHhhhcCCCccccCCCCCC-CC------------CCCc-chhhhh--
Q psy5279         327 GLSRRITSFG-------------KLNPLEYDVRYVRQALRHPWLNFADRKPT-ED------------TPKL-NTDALR--  377 (1310)
Q Consensus       327 GLAr~i~~~~-------------~l~~~~~t~~yv~~~~r~P~l~~~~~~~~-~~------------~p~~-~~~~~~--  377 (1310)
                      |+|+.+....             ..++.|||+.|+++.     +..+..... .+            .|.. ..+...  
T Consensus       163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE-----~~~~~~y~~~~DiwSlGvilyell~Pf~~~~~~~~~~  237 (299)
T 4g31_A          163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPE-----QIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTL  237 (299)
T ss_dssp             CCC--------------------------CCCTTSCHH-----HHTTCCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHH
T ss_pred             ccceecCCCccccccccccccccccCCcccCccccCHH-----HHcCCCCCCHHHHHHHHHHHHHHccCCCCccHHHHHH
Confidence            9999875432             223467888877643     221111000 00            0111 111111  


Q ss_pred             -------------hhcccchhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         378 -------------NYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       378 -------------~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                                   ..+....|++...+..+...|+++.+++.|||..
T Consensus       238 ~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~  284 (299)
T 4g31_A          238 TDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFE  284 (299)
T ss_dssp             HHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhC
Confidence                         1111224455555666788999999999999974

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.1e-38  Score=351.51  Aligned_cols=90  Identities=23%  Similarity=0.416  Sum_probs=80.2

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchhhH
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVL  674 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  674 (1310)
                      .+.|.+...|.+|.||.|.+|..+. ++..+|.|.+.........+..|...|+.|+|+||..+++.|...    +...+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~----~~~~l   78 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETS-SKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESM----EELVM   78 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEET----TEEEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECC-CCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecC----CEEEE
Confidence            5789999999999999999998776 889999999998888888899999999999999999999998655    56789


Q ss_pred             HHHhhcCchhhhhhh
Q psy5279         675 VMEKLQGADVLSYLS  689 (1310)
Q Consensus       675 ~~~~~~~~~~~~~~~  689 (1310)
                      |||+|.|.++..++.
T Consensus        79 v~e~~~g~~L~~~l~   93 (321)
T 1tki_A           79 IFEFISGLDIFERIN   93 (321)
T ss_dssp             EECCCCCCBHHHHHT
T ss_pred             EEEeCCCCCHHHHHH
Confidence            999999988876653

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=7.2e-37  Score=346.40  Aligned_cols=104  Identities=24%  Similarity=0.433  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC-cccccCCCCCCcccccccccC---C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-TLIHPINTPNPEFAAPEVLAE---E 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g-~~~~~~~tGtp~Y~APEvl~~---~ 1024 (1310)
                      ..++.||+.||+|||++|||||||||+|||++.  +..+||+|||+|+...... .......+|||.|||||++.+   .
T Consensus       135 ~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~--~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~  212 (307)
T 3omv_A          135 IDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE--GLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN  212 (307)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEET--TEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSC
T ss_pred             HHHHHHHHHHHHHHHHCCccCCccCHHHEEECC--CCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCC
Confidence            445779999999999999999999999999985  5679999999997654321 222334568899999999964   3


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      +|+.++|||||||++|||++|+.||.+.+.
T Consensus       213 ~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~  242 (307)
T 3omv_A          213 PFSFQSDVYSYGIVLYELMTGELPYSHINN  242 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred             CCCcHHHhHhHHHHHHHHHHCCCCCCCCCh
Confidence            588999999999999999999999987554

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.2e-35  Score=342.77  Aligned_cols=148  Identities=19%  Similarity=0.341  Sum_probs=133.0

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEc---CCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVER---SSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k---~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~l  255 (1310)
                      .+.++|++.+.||+|+||+||+|+++   .+++.||||++....  ....+.+|+.+|+.+ +|||||+++++|++++.+
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence            46789999999999999999999885   468899999986543  344578999999998 699999999999999999


Q ss_pred             EEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         256 TIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |||||||+||+|.+.+.   .+++.+++.|++||+.||+|||++|||||||||+|||++.+. ..+||+|||+|+...
T Consensus        96 ~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~-~~~kl~DFGla~~~~  169 (361)
T 4f9c_A           96 VIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRL-KKYALVDFGLAQGTH  169 (361)
T ss_dssp             EEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT-TEEEECCCTTCEECT
T ss_pred             EEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCC-CeEEECcCCCCcccC
Confidence            99999999999999884   599999999999999999999999999999999999998652 489999999998754

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=7.3e-37  Score=363.37  Aligned_cols=118  Identities=19%  Similarity=0.291  Sum_probs=86.2

Q ss_pred             CCCCCCCccccCCCccccCCCC---CcchhhhhhccccchhhhHHHHhhccccceeeeecccC---cchhhhhhHHhhhh
Q psy5279         574 DPPPLNYSVEDSPIEWSTEPPT---DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS---HDTLHQVNTEFDNL  647 (1310)
Q Consensus       574 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  647 (1310)
                      ..|+++..+.-.|-.+.+....   +.|+++..|-+|.||+|.+|..+. ++..||.|++...   ......+..|...|
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l   90 (494)
T 3lij_A           12 ENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKV-THVERAIKIIRKTSVSTSSNSKLLEEVAVL   90 (494)
T ss_dssp             ---CCGGGCCCCGGGGCCCCBCCHHHHEEEEEEEECC---EEEEEEETT-TCCEEEEEEEEC-----CTTHHHHHHHHHH
T ss_pred             CCccccceeccchhheeecCCCchhcCeEEeeEEecCCCEEEEEEEECC-CCcEEEEEEEeccccCchHHHHHHHHHHHH
Confidence            3455666666555555444433   379999999999999999988776 7889999998653   44567788999999


Q ss_pred             hhhchhhHHHHHHhcCCCCcccchhhHHHHhhcCchhhhhhhccccchh
Q psy5279         648 RSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTE  696 (1310)
Q Consensus       648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  696 (1310)
                      +.|+|+||..+++.|...    +...+|||+|.|.+++.++..+..+++
T Consensus        91 ~~l~hpniv~~~~~~~~~----~~~~lv~e~~~~g~L~~~~~~~~~~~~  135 (494)
T 3lij_A           91 KLLDHPNIMKLYDFFEDK----RNYYLVMECYKGGELFDEIIHRMKFNE  135 (494)
T ss_dssp             TTCCCTTBCCEEEEEECS----SEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             HhCCCCCCCeEEEEEEeC----CEEEEEEecCCCCcHHHHHHHcCCCCH
Confidence            999999999999999765    567899999999998877654444333

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.4e-36  Score=371.76  Aligned_cols=258  Identities=21%  Similarity=0.308  Sum_probs=187.9

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHH---HHHHHHHhcCCCCcceEEEEEEeCCeE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFK---NELDIMNQLCHRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~---rEI~IL~~L~HPNIVkL~d~f~~~~~l  255 (1310)
                      -++|++.+.||+|+||+||+|+++.||+.||||++.+...   .....+.   +++.+|+.++|||||+|+++|++++.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            4789999999999999999999999999999999975321   1222233   446777888999999999999999999


Q ss_pred             EEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         256 TIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |||||||+||+|++++.+.+.|+|.+++.|++||+.||+|||++|||||||||+||||+.++  +|||+|||+|+.+.. 
T Consensus       268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G--~vKL~DFGlA~~~~~-  344 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGLACDFSK-  344 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTS--CEEECCCTTCEECSS-
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCC--CEEecccceeeecCC-
Confidence            99999999999999999888999999999999999999999999999999999999998766  899999999998754 


Q ss_pred             CCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceecCC
Q psy5279         336 GKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIYPP  415 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~~~  415 (1310)
                      +...+.|||+.|++     |++....                ..|+...|||+.             +|+.+..+++.+|
T Consensus       345 ~~~~t~~GTp~YmA-----PEvl~~~----------------~~y~~~vDiWSL-------------GvilYEmLtG~~P  390 (689)
T 3v5w_A          345 KKPHASVGTHGYMA-----PEVLQKG----------------VAYDSSADWFSL-------------GCMLFKLLRGHSP  390 (689)
T ss_dssp             CCCCSCCSCGGGCC-----HHHHSTT----------------CCCCTHHHHHHH-------------HHHHHHHHHSSCT
T ss_pred             CCCCCccCCcCccC-----HHHHhCC----------------CCCCcHHHHHHH-------------HHHHHHHHhCCCC
Confidence            34567899998876     4443111                125667897555             3333444444444


Q ss_pred             CCCCCCCCCCcceecccccccccccccccCCCCCCCcccc-cCCCCCCCC--chhhHHHHhccCCC
Q psy5279         416 GTQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWE-DNVPNRGPG--GELLHSLTRQSYYT  478 (1310)
Q Consensus       416 ~~~~tp~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~~~-d~v~e~~~~--~el~~~~~~~~~~~  478 (1310)
                      +.+.+.... ..+ ..............++..+.++|..+ ..+|+.+.|  ++-.+-|+++..|.
T Consensus       391 F~~~~~~~~-~~i-~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~  454 (689)
T 3v5w_A          391 FRQHKTKDK-HEI-DRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR  454 (689)
T ss_dssp             TCGGGCCCH-HHH-HHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGT
T ss_pred             CCCCChHHH-HHH-HHhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCcccc
Confidence            433322210 010 01111111112233344445566555 778888877  34566677776664

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.2e-36  Score=342.42  Aligned_cols=96  Identities=26%  Similarity=0.452  Sum_probs=80.4

Q ss_pred             cCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcc-------hhhhhhHHhhhhhhhchhhHHHHHHhcC
Q psy5279         591 TEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-------TLHQVNTEFDNLRSLRHERIASLLEAYK  663 (1310)
Q Consensus       591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  663 (1310)
                      .+...+.|.+...|.+|.||.|.+|..+. ++..||.|++.....       ....+..|...|+.|+|++|..+++.|.
T Consensus         6 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   84 (326)
T 2y0a_A            6 QENVDDYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE   84 (326)
T ss_dssp             CSCHHHHEEEEEEEECCSSEEEEEEEETT-TCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             cCCcccceEeceEEeeCCCeEEEEEEECC-CCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            34456789999999999999999988776 889999999976543       3567889999999999999999999987


Q ss_pred             CCCcccchhhHHHHhhcCchhhhhhhcc
Q psy5279         664 PSTTASNIAVLVMEKLQGADVLSYLSSR  691 (1310)
Q Consensus       664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  691 (1310)
                      ..    +...+|||+|.|.++..++..+
T Consensus        85 ~~----~~~~lv~e~~~~~~L~~~l~~~  108 (326)
T 2y0a_A           85 NK----TDVILILELVAGGELFDFLAEK  108 (326)
T ss_dssp             CS----SEEEEEEECCCSCBHHHHHTTS
T ss_pred             eC----CEEEEEEEcCCCCCHHHHHHhc
Confidence            65    5678999999998887766443

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=1.8e-36  Score=342.96  Aligned_cols=95  Identities=26%  Similarity=0.444  Sum_probs=79.5

Q ss_pred             CCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccC---cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcc
Q psy5279         592 EPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS---HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTA  668 (1310)
Q Consensus       592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  668 (1310)
                      .+..+.|+++..|.+|.||+|.+|..+. ++..||.|++...   ......+..|...|+.|+|+||..+++.+...   
T Consensus        11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~---   86 (328)
T 3fe3_A           11 QPHIGNYRLLKTIGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE---   86 (328)
T ss_dssp             CCEETTEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred             CCccCCEEEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC---
Confidence            3456789999999999999999886655 8899999998653   44567788999999999999999999998765   


Q ss_pred             cchhhHHHHhhcCchhhhhhhcc
Q psy5279         669 SNIAVLVMEKLQGADVLSYLSSR  691 (1310)
Q Consensus       669 ~~~~~~~~~~~~~~~~~~~~~~~  691 (1310)
                       +...+|||++.|.++..++..+
T Consensus        87 -~~~~lv~e~~~~~~L~~~l~~~  108 (328)
T 3fe3_A           87 -KTLYLIMEYASGGEVFDYLVAH  108 (328)
T ss_dssp             -SEEEEEECCCTTCBHHHHHHHH
T ss_pred             -CEEEEEEECCCCCcHHHHHHHc
Confidence             5678999999999888776443

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-36  Score=352.74  Aligned_cols=212  Identities=31%  Similarity=0.547  Sum_probs=165.9

Q ss_pred             CCccccCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCc-chhhhhhHHhhhhhhhchhhHHHHHHhcCC
Q psy5279         586 PIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH-DTLHQVNTEFDNLRSLRHERIASLLEAYKP  664 (1310)
Q Consensus       586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  664 (1310)
                      |++.....-.+.|+++..|.+|.||.|.+|..+. ++..+|+|++.-.. .....+..|.+.|+.|+|+||..+++++..
T Consensus        41 ~~~~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~-~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~  119 (387)
T 1kob_A           41 PVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKA-TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED  119 (387)
T ss_dssp             CCCCBCSCGGGTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC
T ss_pred             cccccCCccccceEEEEEEecCCCEEEEEEEECC-CCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe
Confidence            3444444567889999999999999999998776 88999999987543 345678899999999999999999999876


Q ss_pred             CCcccchhhHHHHhhcCchhhhhhhccc-cchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccc
Q psy5279         665 STTASNIAVLVMEKLQGADVLSYLSSRH-EYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTAN  743 (1310)
Q Consensus       665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (1310)
                      .    +..+||||+|.|.++..++..+. ..++.                                              
T Consensus       120 ~----~~~~lv~E~~~gg~L~~~l~~~~~~l~~~----------------------------------------------  149 (387)
T 1kob_A          120 K----YEMVLILEFLSGGELFDRIAAEDYKMSEA----------------------------------------------  149 (387)
T ss_dssp             S----SEEEEEEECCCCCBHHHHTTCTTCCBCHH----------------------------------------------
T ss_pred             C----CEEEEEEEcCCCCcHHHHHHhhcCCCCHH----------------------------------------------
Confidence            5    56789999999988876654321 11111                                              


Q ss_pred             ccccccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCC
Q psy5279         744 LRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGH  823 (1310)
Q Consensus       744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  823 (1310)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (387)
T 1kob_A          150 --------------------------------------------------------------------------------  149 (387)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceee
Q psy5279         824 LDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITI  903 (1310)
Q Consensus       824 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~  903 (1310)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (387)
T 1kob_A          150 --------------------------------------------------------------------------------  149 (387)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeeCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC
Q psy5279         904 PVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR  983 (1310)
Q Consensus       904 ~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~  983 (1310)
                                                                 .+..++.||+.||.|||++||+||||||+|||++...
T Consensus       150 -------------------------------------------~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~  186 (387)
T 1kob_A          150 -------------------------------------------EVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKK  186 (387)
T ss_dssp             -------------------------------------------HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTT
T ss_pred             -------------------------------------------HHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCC
Confidence                                                       1344567999999999999999999999999998655


Q ss_pred             CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279         984 SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus       984 ~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ...+||+|||+++.........  ...||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+
T Consensus       187 ~~~vkL~DFG~a~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~  254 (387)
T 1kob_A          187 ASSVKIIDFGLATKLNPDEIVK--VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED  254 (387)
T ss_dssp             CCCEEECCCTTCEECCTTSCEE--EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred             CCceEEEecccceecCCCccee--eeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC
Confidence            6679999999998765432222  2246788999998887777778888888888888888888876543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=1.8e-36  Score=358.94  Aligned_cols=97  Identities=21%  Similarity=0.380  Sum_probs=80.7

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeeccc---CcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccc
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY---SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASN  670 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  670 (1310)
                      -.+.|+++..|.+|.||+|.+|..+. ++..||.|++..   .......+..|...|+.|+|+||..+++.|...    +
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~----~   94 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRI-TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS----S   94 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETT-TCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECS----S
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECC-CCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcC----C
Confidence            35789999999999999999998765 789999999853   345667889999999999999999999998765    5


Q ss_pred             hhhHHHHhhcCchhhhhhhccccch
Q psy5279         671 IAVLVMEKLQGADVLSYLSSRHEYT  695 (1310)
Q Consensus       671 ~~~~~~~~~~~~~~~~~~~~~~~~~  695 (1310)
                      ...+|||+|.|.+++.++..+..++
T Consensus        95 ~~~lv~e~~~~~~L~~~~~~~~~~~  119 (486)
T 3mwu_A           95 SFYIVGELYTGGELFDEIIKRKRFS  119 (486)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSSCC
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCCCC
Confidence            6789999999999877665443333

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=4.6e-35  Score=330.06  Aligned_cols=198  Identities=20%  Similarity=0.302  Sum_probs=158.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEc-----CCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVER-----SSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k-----~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      .++|.+.++||+|+||+||+|.++     .+|+.||||+++.......+.|.+|+.+|++|+|||||+++++|.+++.+|
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~   91 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   91 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence            357899999999999999999875     468899999998766666778999999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhc-------------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEE
Q psy5279         257 IISELAGGGELLHSLTRQ-------------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL  323 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~-------------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKL  323 (1310)
                      ||||||+||+|.+.+...             ..+++.++..++.||+.||.|||+++||||||||+||||++++  .+||
T Consensus        92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~--~~Ki  169 (299)
T 4asz_A           92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL--LVKI  169 (299)
T ss_dssp             EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--CEEE
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCC--cEEE
Confidence            999999999999999653             3599999999999999999999999999999999999998754  8999


Q ss_pred             EeeccceeecCCCC---CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcc-c
Q psy5279         324 TDFGLSRRITSFGK---LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYY-R  397 (1310)
Q Consensus       324 sDFGLAr~i~~~~~---l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~-~  397 (1310)
                      +|||+|+.......   ....+||+.|++     |++..+                 .-|+...| | +|..+...++ .
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymA-----PE~~~~-----------------~~~~~k~DVwS~Gvvl~Ellt~G  227 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMP-----PESIMY-----------------RKFTTESDVWSLGVVLWEIFTYG  227 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCC-----HHHHHH-----------------CCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             CCcccceecCCCCceeecCceecChhhcC-----HHHHcC-----------------CCCCchhhHHHHHHHHHHHHcCC
Confidence            99999997654322   223456666654     333211                 22455567 5 6777777665 5


Q ss_pred             CCCCCC
Q psy5279         398 RRPLNS  403 (1310)
Q Consensus       398 r~~~~~  403 (1310)
                      +.|..+
T Consensus       228 ~~Pf~~  233 (299)
T 4asz_A          228 KQPWYQ  233 (299)
T ss_dssp             CCTTTT
T ss_pred             CCCCCC
Confidence            665543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=4.8e-36  Score=357.15  Aligned_cols=98  Identities=22%  Similarity=0.378  Sum_probs=79.1

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCc--------------chhhhhhHHhhhhhhhchhhHHHHH
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH--------------DTLHQVNTEFDNLRSLRHERIASLL  659 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~  659 (1310)
                      -.+.|+++..|-+|.||.|.+|..+. ++..||.|++.-..              .....+..|...|++|+|+||..++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~  112 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKN-GHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF  112 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETT-TCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECC-CCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            56789999999999999999987765 88999999987543              3456788999999999999999999


Q ss_pred             HhcCCCCcccchhhHHHHhhcCchhhhhhhccccchh
Q psy5279         660 EAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTE  696 (1310)
Q Consensus       660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  696 (1310)
                      +.|...    ....+|||+|.|.++..++..+..+++
T Consensus       113 ~~~~~~----~~~~lv~e~~~gg~L~~~l~~~~~~~~  145 (504)
T 3q5i_A          113 DVFEDK----KYFYLVTEFYEGGELFEQIINRHKFDE  145 (504)
T ss_dssp             EEEECS----SEEEEEEECCTTCBHHHHHHHHSCCCH
T ss_pred             EEEEcC----CEEEEEEecCCCCcHHHHHHHcCCCCH
Confidence            999765    567899999999998877755444443

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=2.8e-36  Score=356.36  Aligned_cols=100  Identities=23%  Similarity=0.320  Sum_probs=82.8

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccC----cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcc
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS----HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTA  668 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  668 (1310)
                      .-.++|.+...|.+|.||.|.+|..+. ++..||.|++...    ......+..|...|+.|+|+||..+++.|...   
T Consensus        23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~---   98 (484)
T 3nyv_A           23 IFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK---   98 (484)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECS---
T ss_pred             cccCceEEeeEEecCCCEEEEEEEECC-CCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC---
Confidence            345789999999999999999987765 8899999998643    34567789999999999999999999998765   


Q ss_pred             cchhhHHHHhhcCchhhhhhhccccchhh
Q psy5279         669 SNIAVLVMEKLQGADVLSYLSSRHEYTEQ  697 (1310)
Q Consensus       669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  697 (1310)
                       +...+|||+|.|.+++.++..+..+++.
T Consensus        99 -~~~~lv~e~~~~~~L~~~~~~~~~~~~~  126 (484)
T 3nyv_A           99 -GYFYLVGEVYTGGELFDEIISRKRFSEV  126 (484)
T ss_dssp             -SEEEEEECCCCSCBHHHHHHTCSCCBHH
T ss_pred             -CEEEEEEecCCCCCHHHHHHhcCCCCHH
Confidence             6678999999999988777655444443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=4.5e-36  Score=341.30  Aligned_cols=104  Identities=34%  Similarity=0.595  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      +..++.||+.||+|||++||+||||||+|||++..+ ...+||+|||++........ ......||+.|+|||++.+..|
T Consensus       132 ~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~  210 (351)
T 3c0i_A          132 ASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL-VAGGRVGTPHFMAPEVVKREPY  210 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSC-BCCCCCSCGGGCCHHHHTTCCB
T ss_pred             HHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCe-eecCCcCCcCccCHHHHcCCCC
Confidence            345678999999999999999999999999997643 34699999999987654322 1223457899999999999999


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      +.++|||||||++|+|++|..||.+.
T Consensus       211 ~~~~DiwslG~il~~ll~g~~pf~~~  236 (351)
T 3c0i_A          211 GKPVDVWGCGVILFILLSGCLPFYGT  236 (351)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred             CchHhhHHHHHHHHHHHHCCCCCCCc
Confidence            99999999999999999999999764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.6e-34  Score=327.90  Aligned_cols=197  Identities=20%  Similarity=0.280  Sum_probs=152.5

Q ss_pred             CCeeeeceecccCceEEEEEEEc-----CCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVER-----SSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k-----~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ++|.+.++||+|+||+||+|..+     .+++.||||+++.......+.|.+|+.+|++|+|||||+++++|.+++.+||
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            56788999999999999999865     4689999999987666667789999999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhc---------------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEE
Q psy5279         258 ISELAGGGELLHSLTRQ---------------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL  322 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~---------------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VK  322 (1310)
                      |||||+||+|.+++...               +.+++.++..++.||+.||.|||+++||||||||+||||+.++  .+|
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~--~~K  198 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGL--VVK  198 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTT--EEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCC--cEE
Confidence            99999999999988643               3589999999999999999999999999999999999998655  899


Q ss_pred             EEeeccceeecCCCC---CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcc-
Q psy5279         323 LTDFGLSRRITSFGK---LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYY-  396 (1310)
Q Consensus       323 LsDFGLAr~i~~~~~---l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~-  396 (1310)
                      |+|||+|+.+.....   ....+||+.|++     |++..+                 ..|+...| | +|..+...++ 
T Consensus       199 i~DFGla~~~~~~~~~~~~~~~~gt~~ymA-----PE~~~~-----------------~~~~~~sDvwS~Gvvl~Ellt~  256 (329)
T 4aoj_A          199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMP-----PESILY-----------------RKFTTESDVWSFGVVLWEIFTY  256 (329)
T ss_dssp             ECCCC----------------CCCCGGGCC-----HHHHTT-----------------CCCCHHHHHHHHHHHHHHHHTT
T ss_pred             EcccccceeccCCCcceecCcccccccccC-----hhhhcC-----------------CCCCccccccchHHHHHHHHcC
Confidence            999999997754332   234567777765     443211                 12444566 4 6677777665 


Q ss_pred             cCCCCCC
Q psy5279         397 RRRPLNS  403 (1310)
Q Consensus       397 ~r~~~~~  403 (1310)
                      .+.|..+
T Consensus       257 G~~Pf~~  263 (329)
T 4aoj_A          257 GKQPWYQ  263 (329)
T ss_dssp             SCCTTCS
T ss_pred             CCCCCCC
Confidence            5665543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1.3e-35  Score=337.79  Aligned_cols=104  Identities=26%  Similarity=0.480  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+. .....+||+.|+|||++.+..|+.
T Consensus       108 ~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~--~g~vkL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  184 (337)
T 1o6l_A          108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK--DGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGR  184 (337)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT--TSCEEECCCTTCBCSCCTTC-CBCCCEECGGGCCGGGGSSSCBCT
T ss_pred             HHHHHHHHHHHHHHHHCCeecCcCCHHHEEECC--CCCEEEeeccchhhcccCCC-cccccccChhhCChhhhcCCCCCc
Confidence            445679999999999999999999999999975  45799999999875432222 123345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      ++|||||||++|+|++|..||.+.+..
T Consensus       185 ~~DiwslG~il~ell~g~~Pf~~~~~~  211 (337)
T 1o6l_A          185 AVDWWGLGVVMYEMMCGRLPFYNQDHE  211 (337)
T ss_dssp             THHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             hhhcccchhHHHHHhcCCCCCCCCCHH
Confidence            999999999999999999999876543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=1.9e-35  Score=330.10  Aligned_cols=105  Identities=36%  Similarity=0.714  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCC--CcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS--VQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~--~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .++.||+.||.|||++||+||||||+|||++..+.  ..+||+|||++.........  ....|++.|+|||++.+..++
T Consensus       119 ~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~  196 (321)
T 2a2a_A          119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLG  196 (321)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCC--CCCCSCGGGCCHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccc--cccCCCCCccCcccccCCCCC
Confidence            34679999999999999999999999999986432  26999999999766433221  233578999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      .++|||||||++|+|++|..||.+.+..+
T Consensus       197 ~~~Di~slG~il~~l~~g~~pf~~~~~~~  225 (321)
T 2a2a_A          197 LEADMWSIGVITYILLSGASPFLGDTKQE  225 (321)
T ss_dssp             THHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred             CccccHHHHHHHHHHHHCCCCCCCCCHHH
Confidence            99999999999999999999998765443

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.7e-35  Score=338.58  Aligned_cols=211  Identities=27%  Similarity=0.490  Sum_probs=163.7

Q ss_pred             CCccccCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhhchhhHHHHHHhcCCC
Q psy5279         586 PIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPS  665 (1310)
Q Consensus       586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  665 (1310)
                      |.........++|+++..|.+|.||+|.+|..+. ++..||.|.+.-+......+..|+..+++|+|+||..+++.+...
T Consensus        10 p~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~   88 (361)
T 3uc3_A           10 PLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTP   88 (361)
T ss_dssp             -CCCCCCCCTTTEEEEEEESSSTTSSEEEEEETT-TCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             CCCccCCCCCCcEEEEEEeccCCCEEEEEEEECC-CCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeC
Confidence            3444445567899999999999999999988775 889999999988777778899999999999999999999998765


Q ss_pred             CcccchhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccc
Q psy5279         666 TTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLR  745 (1310)
Q Consensus       666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  745 (1310)
                          +...+|||+|.|.++..++..+..+++..                                               
T Consensus        89 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~-----------------------------------------------  117 (361)
T 3uc3_A           89 ----THLAIIMEYASGGELYERICNAGRFSEDE-----------------------------------------------  117 (361)
T ss_dssp             ----SEEEEEEECCCSCBHHHHHHHHSSCCHHH-----------------------------------------------
T ss_pred             ----CEEEEEEEeCCCCCHHHHHHhcCCCCHHH-----------------------------------------------
Confidence                45789999999998876654322222211                                               


Q ss_pred             ccccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCC
Q psy5279         746 DVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLD  825 (1310)
Q Consensus       746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  825 (1310)
                                                                                                      
T Consensus       118 --------------------------------------------------------------------------------  117 (361)
T 3uc3_A          118 --------------------------------------------------------------------------------  117 (361)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeee
Q psy5279         826 WKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPV  905 (1310)
Q Consensus       826 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l  905 (1310)
                                                                                                      
T Consensus       118 --------------------------------------------------------------------------------  117 (361)
T 3uc3_A          118 --------------------------------------------------------------------------------  117 (361)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCC
Q psy5279         906 VIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSV  985 (1310)
Q Consensus       906 ~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~  985 (1310)
                                                                +..++.||+.||.|||++||+||||||+|||++.....
T Consensus       118 ------------------------------------------~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~  155 (361)
T 3uc3_A          118 ------------------------------------------ARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAP  155 (361)
T ss_dssp             ------------------------------------------HHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSC
T ss_pred             ------------------------------------------HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCc
Confidence                                                      33456799999999999999999999999999865555


Q ss_pred             cEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc-cchhHHHHHHHHHhcCCCCCCCC
Q psy5279         986 QVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus       986 ~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k-sDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .+||+|||+++........  ....||+.|+|||++.+..++.+ +|||||||++|+|++|..||.+.
T Consensus       156 ~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  221 (361)
T 3uc3_A          156 RLKICDFGYSKSSVLHSQP--KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDP  221 (361)
T ss_dssp             CEEECCCCCC-----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC--
T ss_pred             eEEEeecCccccccccCCC--CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCC
Confidence            6999999998743322221  22357899999999998888755 89999999999999999999764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.4e-35  Score=334.34  Aligned_cols=148  Identities=17%  Similarity=0.249  Sum_probs=121.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||++||.|||+++||||||||+|||++.  +..+||+|||+|+........ ......||+.|||||++.+..|
T Consensus       130 ~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~--~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~  207 (299)
T 4asz_A          130 MLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE--NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKF  207 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG--GGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHhCCcccCccCHhhEEECC--CCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCC
Confidence            4667889999999999999999999999999986  457999999999765432221 1222347899999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANN 1099 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~ 1099 (1310)
                      +.++|||||||++|||++ |+.||.+.+..++...+.....  +.....+++++.+|+.+++. +|.+|+++.++
T Consensus       208 ~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i  280 (299)
T 4asz_A          208 TTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV--LQRPRTCPQEVYELMLGCWQREPHMRKNIKGI  280 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC--CCCCccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence            999999999999999998 9999999998888877765432  22345789999999999886 56678888876

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=1e-35  Score=338.69  Aligned_cols=91  Identities=25%  Similarity=0.385  Sum_probs=76.2

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhh-chhhHHHHHHhcCCCCcccchh
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSL-RHERIASLLEAYKPSTTASNIA  672 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  672 (1310)
                      -.+.|++...|.+|.||+|.+|..+. ++..||.|++.-...   ....|.+.|+.+ +|++|..+++.|...    +..
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~----~~~   91 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKA-TNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDG----KYV   91 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECS----SEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECC-CCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcC----CEE
Confidence            35789999999999999999998776 889999999975543   456799999988 799999999998765    667


Q ss_pred             hHHHHhhcCchhhhhhhccc
Q psy5279         673 VLVMEKLQGADVLSYLSSRH  692 (1310)
Q Consensus       673 ~~~~~~~~~~~~~~~~~~~~  692 (1310)
                      .+|||+|.|.+++.++..+.
T Consensus        92 ~lv~E~~~gg~L~~~i~~~~  111 (342)
T 2qr7_A           92 YVVTELMKGGELLDKILRQK  111 (342)
T ss_dssp             EEEECCCCSCBHHHHHHTCT
T ss_pred             EEEEeCCCCCcHHHHHHHcC
Confidence            89999999999887765443

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.4e-35  Score=339.56  Aligned_cols=106  Identities=28%  Similarity=0.529  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+. .....+||+.|+|||++.+..|+.
T Consensus       127 ~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~--~g~ikL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  203 (353)
T 3txo_A          127 RFYAAEIISALMFLHDKGIIYRDLKLDNVLLDH--EGHCKLADFGMCKEGICNGV-TTATFCGTPDYIAPEILQEMLYGP  203 (353)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT--TSCEEECCCTTCBCSCC----------CCGGGCCHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHHHHHCCCcccCCCHHHEEECC--CCCEEEccccceeecccCCc-cccccCCCcCeEChhhcCCCCcCC
Confidence            445679999999999999999999999999975  46799999999875332221 223346789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ++|||||||++|+|++|.+||.+.+..++
T Consensus       204 ~~DiwslG~il~ell~G~~Pf~~~~~~~~  232 (353)
T 3txo_A          204 AVDWWAMGVLLYEMLCGHAPFEAENEDDL  232 (353)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ccCCCcchHHHHHHHhCCCCCCCCCHHHH
Confidence            99999999999999999999988765443

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=4.1e-34  Score=323.86  Aligned_cols=197  Identities=19%  Similarity=0.351  Sum_probs=153.7

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .+.+++.++||+|+||+||+|..+   ..||||+++...  ....+.|.+|+.+|++|+|||||++++++. ++.+||||
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVm  110 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT  110 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEE
Confidence            467789999999999999999754   359999986433  334567999999999999999999999875 46789999


Q ss_pred             ecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC---
Q psy5279         260 ELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF---  335 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~---  335 (1310)
                      |||+||+|.+.+... ..+++.++..++.||+.||+|||++|||||||||+||||++++  .+||+|||||+.....   
T Consensus       111 Ey~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~--~~Ki~DFGla~~~~~~~~~  188 (307)
T 3omv_A          111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGL--TVKIGDFGLATVKSRWSGS  188 (307)
T ss_dssp             ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTE--EEEECCCSSCBC-------
T ss_pred             EcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCC--cEEEeeccCceecccCCcc
Confidence            999999999999654 5699999999999999999999999999999999999998654  8999999999976532   


Q ss_pred             CCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCC
Q psy5279         336 GKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNS  403 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~  403 (1310)
                      ......+||+.|++     |++..+..              ...|+...| | +|..+...++.+.|..+
T Consensus       189 ~~~~~~~GT~~ymA-----PE~l~~~~--------------~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~  239 (307)
T 3omv_A          189 QQVEQPTGSVLWMA-----PEVIRMQD--------------NNPFSFQSDVYSYGIVLYELMTGELPYSH  239 (307)
T ss_dssp             -----CCCCTTSCC-----HHHHHCCS--------------SCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             eeecccccCCCccC-----HHHhhccC--------------CCCCCcHHHhHhHHHHHHHHHHCCCCCCC
Confidence            23456788888775     34321110              011444566 4 77888888888887654

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.1e-33  Score=320.14  Aligned_cols=196  Identities=22%  Similarity=0.354  Sum_probs=156.0

Q ss_pred             CCeeeeceecccCceEEEEEEEc-----CCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVER-----SSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k-----~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      +.+++.++||+|+||+||+|...     .+++.||||+++... ....+.|.+|+.+|++|+|||||+|+++|.+++.+|
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            45788999999999999999853     577899999997543 345678999999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhc----------------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCe
Q psy5279         257 IISELAGGGELLHSLTRQ----------------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH  320 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~----------------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~  320 (1310)
                      ||||||+||+|.+++...                ..+++.++..++.||+.||+|||+++||||||||+||||++++  .
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~--~  183 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKL--N  183 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--C
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCC--C
Confidence            999999999999998542                3589999999999999999999999999999999999998755  8


Q ss_pred             EEEEeeccceeecCCC---CCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhc
Q psy5279         321 LLLTDFGLSRRITSFG---KLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRY  395 (1310)
Q Consensus       321 VKLsDFGLAr~i~~~~---~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~  395 (1310)
                      +||+|||||+.+....   .....+||+.|++     |+...+                 ..|+...| | +|..+.+.+
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymA-----PE~l~~-----------------~~~s~ksDVwSfGvvl~El~  241 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMA-----PEAIMY-----------------GKFSIDSDIWSYGVVLWEVF  241 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCC-----HHHHHH-----------------CCCCHHHHHHHHHHHHHHHH
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccC-----HHHHhC-----------------CCCCccchhhhHHHHHHHHH
Confidence            9999999999764432   3345677777764     443211                 22445567 4 667777766


Q ss_pred             c-cCCCCC
Q psy5279         396 Y-RRRPLN  402 (1310)
Q Consensus       396 ~-~r~~~~  402 (1310)
                      + ++.|..
T Consensus       242 t~g~~Pf~  249 (308)
T 4gt4_A          242 SYGLQPYC  249 (308)
T ss_dssp             TTTCCTTT
T ss_pred             hCCCCCCC
Confidence            5 455543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=3.2e-35  Score=332.59  Aligned_cols=150  Identities=17%  Similarity=0.239  Sum_probs=123.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||+|||+++||||||||+|||++.  +..+||+|||+|+....... .......||+.|||||++.+..|
T Consensus       147 ~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~--~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~  224 (308)
T 4gt4_A          147 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYD--KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKF  224 (308)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG--GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCCccccceEECC--CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCC
Confidence            4567889999999999999999999999999986  45799999999986543221 12233467899999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|||||||++|||++ |..||.+.+..++...+.....  +.....+++++.+|+.+++. +|.+|++..+++.
T Consensus       225 s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~  299 (308)
T 4gt4_A          225 SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV--LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHS  299 (308)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999998 9999999998888877765432  22345789999999999886 5667999888664

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.1e-35  Score=336.53  Aligned_cols=111  Identities=25%  Similarity=0.461  Sum_probs=89.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC--------------------cccccC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG--------------------TLIHPI 1008 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g--------------------~~~~~~ 1008 (1310)
                      .+++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+|+......                    ......
T Consensus       112 ~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~--~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (388)
T 3oz6_A          112 QYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNA--ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD  189 (388)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--TCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------
T ss_pred             HHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcC--CCCEEecCCcccccccccccccccccccccccccccccccccccC
Confidence            456779999999999999999999999999975  5679999999997643210                    111122


Q ss_pred             CCCCCcccccccccC-CCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhh
Q psy5279        1009 NTPNPEFAAPEVLAE-EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061 (1310)
Q Consensus      1009 ~tGtp~Y~APEvl~~-~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I 1061 (1310)
                      ..||+.|+|||++.+ ..|+.++|||||||++|+|++|.+||.+.+..+....+
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i  243 (388)
T 3oz6_A          190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI  243 (388)
T ss_dssp             CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             CcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            467899999999987 57899999999999999999999999998766554443

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2.8e-35  Score=339.19  Aligned_cols=151  Identities=23%  Similarity=0.299  Sum_probs=120.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||+|||+++||||||||+|||++.  +..+||+|||+|+.+...... ......||+.|||||++.+..|
T Consensus       187 ~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~--~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y  264 (353)
T 4ase_A          187 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY  264 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG--GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHhHhhCCeecCccCccceeeCC--CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCC
Confidence            4567889999999999999999999999999986  457999999999866433222 2233457799999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhH-HHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPE-TRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e-~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|||||||++|||++ |..||.+.+..+ ....+.. ..++ .....+++++.+++..++. +|.+|+++.++++|
T Consensus       265 ~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~-g~~~-~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          265 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRM-RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH-TCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHc-CCCC-CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            999999999999999998 999999876444 3333332 2222 2235689999999999886 56789999998876

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=9.3e-35  Score=327.19  Aligned_cols=103  Identities=25%  Similarity=0.517  Sum_probs=68.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++..+ ...+||+|||+++........ .....||+.|+|||++.+..|+
T Consensus       109 ~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~  187 (325)
T 3kn6_A          109 SYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-LKTPCFTLHYAAPELLNQNGYD  187 (325)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----------------------CCCC
T ss_pred             HHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc-ccccCCCcCccCHHHhcCCCCC
Confidence            34567999999999999999999999999997532 347999999999765432221 2233567999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|||||||++|+|++|..||.+.
T Consensus       188 ~~~DiwslG~il~~ll~g~~pf~~~  212 (325)
T 3kn6_A          188 ESCDLWSLGVILYTMLSGQVPFQSH  212 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred             CccchHHHHHHHHHHHhCCCCCCCC
Confidence            9999999999999999999999764

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.3e-34  Score=317.98  Aligned_cols=106  Identities=23%  Similarity=0.399  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++....... ......+|+.|+|||++.+. .++
T Consensus       103 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~  179 (288)
T 1ob3_A          103 KSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR--EGELKIADFGLARAFGIPVR-KYTHEIVTLWYRAPDVLMGSKKYS  179 (288)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT--TSCEEECCTTHHHHHCC----------CCCTTCCHHHHTTCCSCC
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCCEEEeECccccccCcccc-ccccccccccccCchheeCCCCCC
Confidence            345679999999999999999999999999975  45799999999875432111 11223567999999999764 588


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++|||||||++|+|++|..||.+.+..+.
T Consensus       180 ~~~DiwslG~il~~l~~g~~pf~~~~~~~~  209 (288)
T 1ob3_A          180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQ  209 (288)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            999999999999999999999988765443

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.7e-34  Score=322.43  Aligned_cols=107  Identities=21%  Similarity=0.348  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~y 1026 (1310)
                      +..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++....... ......+|+.|+|||++.+ ..+
T Consensus       121 ~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~--~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~  197 (311)
T 3niz_A          121 IKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS--DGALKLADFGLARAFGIPVR-SYTHEVVTLWYRAPDVLMGSKKY  197 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--TCCEEECCCTTCEETTSCCC----CCCCCCTTCCHHHHTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCchHhEEECC--CCCEEEccCcCceecCCCcc-cccCCcccCCcCCHHHhcCCCCC
Confidence            3456789999999999999999999999999975  45799999999976542221 1223356899999999986 468


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      +.++|||||||++|+|++|..||.+.+..+.
T Consensus       198 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~~  228 (311)
T 3niz_A          198 STSVDIWSIGCIFAEMITGKPLFPGVTDDDQ  228 (311)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH
T ss_pred             CchHHhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            8999999999999999999999988765443

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1.8e-34  Score=338.69  Aligned_cols=104  Identities=26%  Similarity=0.401  Sum_probs=80.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc------------------------
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT------------------------ 1003 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~------------------------ 1003 (1310)
                      +..++.||+.||+|||++|||||||||+|||++.  ++.+||+|||+++.......                        
T Consensus       158 ~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~--~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (458)
T 3rp9_A          158 IKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQ--DCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKN  235 (458)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT--TCCEEECCCTTCBCTTSCTTCCCCCC------------------
T ss_pred             HHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECC--CCCEeecccccchhccCccccccccccCcccccccccccccccc
Confidence            4556789999999999999999999999999985  56799999999976532110                        


Q ss_pred             --ccccCCCCCCcccccccc-cCCCCCCccchhHHHHHHHHHhc-----------CCCCCCCCC
Q psy5279        1004 --LIHPINTPNPEFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLS-----------GASPFRGQS 1053 (1310)
Q Consensus      1004 --~~~~~~tGtp~Y~APEvl-~~~~ys~ksDIWSLGViLyeLLt-----------G~~PF~g~~ 1053 (1310)
                        .......||+.|+|||++ .+..|+.++|||||||++|+|++           |.+||.|.+
T Consensus       236 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~  299 (458)
T 3rp9_A          236 LKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSS  299 (458)
T ss_dssp             ---------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC---
T ss_pred             ccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCc
Confidence              011223568999999986 45679999999999999999999           777777754

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=6e-35  Score=333.65  Aligned_cols=105  Identities=30%  Similarity=0.547  Sum_probs=88.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++...... ......+||+.|+|||++.+..|+.
T Consensus       121 ~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~--~g~vkL~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~  197 (345)
T 1xjd_A          121 TFYAAEIILGLQFLHSKGIVYRDLKLDNILLDK--DGHIKIADFGMCKENMLGD-AKTNTFCGTPDYIAPEILLGQKYNH  197 (345)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT--TSCEEECCCTTCBCCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCCCChhhEEECC--CCCEEEeEChhhhhcccCC-CcccCCCCCcccCChhhhcCCCCCC
Confidence            345679999999999999999999999999975  4579999999997543221 1233456789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++|||||||++|+|++|..||.+.+..+
T Consensus       198 ~~DiwslG~il~ell~g~~Pf~~~~~~~  225 (345)
T 1xjd_A          198 SVDWWSFGVLLYEMLIGQSPFHGQDEEE  225 (345)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             hhhhHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            9999999999999999999998765443

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=9.2e-35  Score=334.58  Aligned_cols=103  Identities=36%  Similarity=0.650  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||+.......+||+|||+++........  ....||+.|+|||++.+..++.
T Consensus       190 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~  267 (373)
T 2x4f_A          190 ILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL--KVNFGTPEFLAPEVVNYDFVSF  267 (373)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC--CCCCSSCTTCCHHHHTTCBCCH
T ss_pred             HHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc--ccccCCCcEeChhhccCCCCCc
Confidence            34567999999999999999999999999997655678999999999876443222  2335778999999988777778


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|||||||++|+|++|..||.+.+
T Consensus       268 ~~DiwslG~il~elltg~~pf~~~~  292 (373)
T 2x4f_A          268 PTDMWSVGVIAYMLLSGLSPFLGDN  292 (373)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             HHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            8888888888888888888886654

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-34  Score=326.66  Aligned_cols=101  Identities=27%  Similarity=0.554  Sum_probs=87.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....    ....+||+.|+|||++.+..|+.
T Consensus       109 ~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~--~g~~kL~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~  182 (318)
T 1fot_A          109 KFYAAEVCLALEYLHSKDIIYRDLKPENILLDK--NGHIKITDFGFAKYVPDV----TYTLCGTPDYIAPEVVSTKPYNK  182 (318)
T ss_dssp             HHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT--TSCEEECCCSSCEECSSC----BCCCCSCTTTCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCChheEEEcC--CCCEEEeecCcceecCCc----cccccCCccccCHhHhcCCCCCc
Confidence            445679999999999999999999999999975  567999999999765421    22346789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      ++|||||||++|+|++|..||.+.+..
T Consensus       183 ~~DiwslG~il~ell~g~~pf~~~~~~  209 (318)
T 1fot_A          183 SIDWWSFGILIYEMLAGYTPFYDSNTM  209 (318)
T ss_dssp             THHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             ccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence            999999999999999999999876543

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.4e-34  Score=342.83  Aligned_cols=109  Identities=23%  Similarity=0.388  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.......  .....||+.|+|||++.+..|+.
T Consensus       167 ~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~--~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~  242 (464)
T 3ttj_A          167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKE  242 (464)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TSCEEECCCCCC-----CCC--C----CCCTTCCHHHHTTCCCCT
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCChHhEEEeC--CCCEEEEEEEeeeecCCCcc--cCCCcccccccCHHHHcCCCCCH
Confidence            456789999999999999999999999999985  45799999999976543222  22345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I 1061 (1310)
                      ++|||||||++|+|++|.+||.+.+..+....+
T Consensus       243 ~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i  275 (464)
T 3ttj_A          243 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV  275 (464)
T ss_dssp             THHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            999999999999999999999998766554433

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=2.1e-34  Score=318.90  Aligned_cols=107  Identities=26%  Similarity=0.397  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      +..++.||+.||+|||++||+||||||+|||++.  +..+||+|||+++........  ....||+.|+|||++.+..++
T Consensus       122 ~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~--~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~  197 (308)
T 3g33_A          122 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS--GGTVKLADFGLARIYSYQMAL--TPVVVTLWYRAPEVLLQSTYA  197 (308)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECT--TSCEEECSCSCTTTSTTCCCS--GGGGCCCSSCCHHHHHTSCCC
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC--CCCEEEeeCccccccCCCccc--CCccccccccCchHHcCCCCC
Confidence            3456789999999999999999999999999975  457999999998765432222  223467999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      .++|||||||++|+|++|.+||.+.+..+..
T Consensus       198 ~~~DiwslG~il~~l~~g~~pf~~~~~~~~~  228 (308)
T 3g33_A          198 TPVDMWSVGCIFAEMFRRKPLFCGNSEADQL  228 (308)
T ss_dssp             STHHHHHHHHHHHHTTTSSCSCCCSSHHHHH
T ss_pred             chHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            9999999999999999999999987765543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=2.4e-34  Score=316.01  Aligned_cols=103  Identities=21%  Similarity=0.364  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC-C
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP-I 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~-y 1026 (1310)
                      +..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++....... ......||+.|+|||++.+.. +
T Consensus       103 ~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~  179 (292)
T 3o0g_A          103 VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR--NGELKLANFGLARAFGIPVR-CYSAEVVTLWYRPPDVLFGAKLY  179 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TSCEEECCCTTCEECCSCCS-CCCSCCSCGGGCCHHHHTTCSCC
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEeecccceecCCccc-cccCCccccCCcChHHHcCCCCc
Confidence            3456779999999999999999999999999985  45799999999976543222 223345789999999998765 7


Q ss_pred             CCccchhHHHHHHHHHhcCCCCC-CCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPF-RGQS 1053 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF-~g~~ 1053 (1310)
                      +.++|||||||++|+|++|..|| .+.+
T Consensus       180 ~~~~DiwslG~il~~l~~~~~p~~~~~~  207 (292)
T 3o0g_A          180 STSIDMWSAGCIFAELANAGRPLFPGND  207 (292)
T ss_dssp             CTHHHHHHHHHHHHHHTTTSCCSCCCSS
T ss_pred             CchHHHHHHHHHHHHHHHcCCCCcCCCC
Confidence            99999999999999999887775 4443

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=3.7e-35  Score=334.23  Aligned_cols=99  Identities=29%  Similarity=0.608  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCC-C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI-F 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~y-s 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++.........  ...+||+.|+|||++.+..+ +
T Consensus       111 ~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~--~~~~kl~DFG~s~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~  186 (336)
T 3h4j_B          111 RRFFQQIICAIEYCHRHKIVHRDLKPENLLLDD--NLNVKIADFGLSNIMTDGNFL--KTSCGSPNYAAPEVINGKLYAG  186 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECT--TCCEEECCSSCTBTTTTSBTT--CCCTTSTTTSCGGGSCCSGGGC
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCchhhEEEcC--CCCEEEEEeccceeccCCccc--ccccCCcCcCCHHHHcCCCCCC
Confidence            345679999999999999999999999999985  457999999998765432222  23457899999999987776 5


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      .++|||||||++|+|++|..||.+
T Consensus       187 ~~~DiwslG~il~~ll~g~~Pf~~  210 (336)
T 3h4j_B          187 PEVDVWSCGIVLYVMLVGRLPFDD  210 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSSBC
T ss_pred             CccchhHHHHHHHHHHhCCCCCCC
Confidence            778888888888888888888854

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=9.7e-35  Score=331.47  Aligned_cols=150  Identities=16%  Similarity=0.229  Sum_probs=116.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||+++||||||||+|||++.  +..+||+|||+|+........ ......||+.|||||++.+..|
T Consensus       160 ~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~--~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~  237 (329)
T 4aoj_A          160 LLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ--GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKF  237 (329)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET--TTEEEECCCC----------------CCCCGGGCCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHhcCCeecccccHhhEEECC--CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCC
Confidence            4567889999999999999999999999999985  568999999999865432221 2223457899999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|||||||++|||++ |+.||.+.+..+....+.... + +.....+++++.+|+.+++. +|.+|+++.+++.
T Consensus       238 ~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~-~-~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~  312 (329)
T 4aoj_A          238 TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR-E-LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA  312 (329)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTC-C-CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred             CccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-C-CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            999999999999999998 999999998888877765432 1 12335789999999999886 5678999888764

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=5.9e-33  Score=319.03  Aligned_cols=233  Identities=28%  Similarity=0.490  Sum_probs=186.7

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc------chHHHHHHHHHHHHhcCCCCcceEEEEEEeC
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN------QYKSLFKNELDIMNQLCHRNLVRLHDSYETK  252 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~------~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~  252 (1310)
                      ..+.+.|++.+.||+|+||+||+|.++.+|+.||+|++.+...      ...+.+.+|+.+|+.|+|||||+++++|.+.
T Consensus         8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~   87 (361)
T 2yab_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENR   87 (361)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeC
Confidence            3678999999999999999999999999999999999976432      1356789999999999999999999999999


Q ss_pred             CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC--CeEEEEeeccce
Q psy5279         253 DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSR  330 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~--~~VKLsDFGLAr  330 (1310)
                      +.+|+|||||+||+|.+.+...+.+++.++..++.||+.||.|||++||+||||||+|||++.++.  ..+||+|||+|+
T Consensus        88 ~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~  167 (361)
T 2yab_A           88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (361)
T ss_dssp             SEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence            999999999999999999988888999999999999999999999999999999999999976542  279999999999


Q ss_pred             eecCCCCCCCcccchHHHhhh-------------------------cCCCccccCCCCC----CCCCCCcchhhhhhhcc
Q psy5279         331 RITSFGKLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKP----TEDTPKLNTDALRNYYN  381 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~  381 (1310)
                      .+.........+||+.|+++.                         +..||........    ......+.......+..
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  247 (361)
T 2yab_A          168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSE  247 (361)
T ss_dssp             ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCH
T ss_pred             EcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCH
Confidence            887766667778888776543                         1223321100000    00001112222233444


Q ss_pred             cchhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         382 LYKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       382 ~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      .++|++...+..+...|+++.+++.|||+.
T Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  277 (361)
T 2yab_A          248 LAKDFIRKLLVKETRKRLTIQEALRHPWIT  277 (361)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHTSTTTS
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhcCcCcC
Confidence            567777777788899999999999999974

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=3.4e-34  Score=320.34  Aligned_cols=108  Identities=23%  Similarity=0.392  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      +..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++....... ......||+.|+|||++.+. .+
T Consensus       110 ~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~  186 (317)
T 2pmi_A          110 VKYFQWQLLQGLAFCHENKILHRDLKPQNLLINK--RGQLKLGDFGLARAFGIPVN-TFSSEVVTLWYRAPDVLMGSRTY  186 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--TCCEEECCCSSCEETTSCCC-CCCCCCSCCTTCCHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcC--CCCEEECcCccceecCCCcc-cCCCCcccccccCchHhhCCCCC
Confidence            4556789999999999999999999999999975  45799999999976542211 12233578999999999864 68


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      +.++|||||||++|+|++|..||.+.+..+..
T Consensus       187 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  218 (317)
T 2pmi_A          187 STSIDIWSCGCILAEMITGKPLFPGTNDEEQL  218 (317)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence            99999999999999999999999987765543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.7e-34  Score=330.82  Aligned_cols=106  Identities=29%  Similarity=0.542  Sum_probs=88.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+. .....+||+.|+|||++.+..|+.
T Consensus       124 ~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~--~g~vkL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  200 (353)
T 2i0e_A          124 VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGK  200 (353)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT--TSCEEECCCTTCBCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBST
T ss_pred             HHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcC--CCcEEEEeCCcccccccCCc-ccccccCCccccChhhhcCCCcCC
Confidence            445679999999999999999999999999975  45799999999975432222 223446889999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ++|||||||++|+|++|..||.+.+..++
T Consensus       201 ~~DiwslG~il~ell~G~~Pf~~~~~~~~  229 (353)
T 2i0e_A          201 SVDWWAFGVLLYEMLAGQAPFEGEDEDEL  229 (353)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             cccccchHHHHHHHHcCCCCCCCCCHHHH
Confidence            99999999999999999999987655443

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.7e-34  Score=336.64  Aligned_cols=102  Identities=29%  Similarity=0.484  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      +..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+. .....+||+.|+|||++.+..|+
T Consensus       155 ~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~--~g~ikL~DFGla~~~~~~~~-~~~~~~gt~~Y~aPE~l~~~~~~  231 (396)
T 4dc2_A          155 ARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGD-TTSTFCGTPNYIAPEILRGEDYG  231 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT--TSCEEECCCTTCBCCCCTTC-CBCCCCBCGGGCCHHHHTTCCBC
T ss_pred             HHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECC--CCCEEEeecceeeecccCCC-ccccccCCcccCCchhhcCCCCC
Confidence            3456779999999999999999999999999985  56799999999975332222 22344678999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|||||||++|+|++|.+||.+.
T Consensus       232 ~~~DiwslGvllyell~G~~Pf~~~  256 (396)
T 4dc2_A          232 FSVDWWALGVLMFEMMAGRSPFDIV  256 (396)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCccc
Confidence            9999999999999999999999654

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.3e-34  Score=325.29  Aligned_cols=105  Identities=23%  Similarity=0.501  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.....    .....+|+.|+|||++.+ ..++
T Consensus       131 ~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~  204 (367)
T 1cm8_A          131 QFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE--DCELKILDFGLARQADSE----MTGYVVTRWYRAPEVILNWMRYT  204 (367)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--TCCEEECCCTTCEECCSS----CCSSCSCGGGCCTHHHHTTTCCC
T ss_pred             HHHHHHHHHHHHHHHHCCccccCcCHHHEEEcC--CCCEEEEeeecccccccc----cCcCcCCCCcCCHHHHhCCCCCC
Confidence            456779999999999999999999999999975  467999999999765422    122356899999999987 6799


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      .++||||+||++|+|++|.+||.+.+..+...
T Consensus       205 ~~~DiwslG~il~ell~g~~pf~~~~~~~~l~  236 (367)
T 1cm8_A          205 QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK  236 (367)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            99999999999999999999999887655443

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=4.4e-34  Score=334.37  Aligned_cols=103  Identities=20%  Similarity=0.344  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc---------------------cc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---------------------IH 1006 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~---------------------~~ 1006 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++........                     ..
T Consensus       131 ~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~--~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (432)
T 3n9x_A          131 IKTILYNLLLGENFIHESGIIHRDLKPANCLLNQ--DCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQL  208 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--TCCEEECCCTTCEEC-----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECC--CCCEEEccCCCcccccccccccccccccccccccccccchhccc
Confidence            3456789999999999999999999999999975  567999999999865432110                     12


Q ss_pred             cCCCCCCcccccccc-cCCCCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1007 PINTPNPEFAAPEVL-AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1007 ~~~tGtp~Y~APEvl-~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ....||+.|+|||++ .+..|+.++|||||||++|+|++|..||...
T Consensus       209 ~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~  255 (432)
T 3n9x_A          209 TSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIND  255 (432)
T ss_dssp             --CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSS
T ss_pred             cCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccc
Confidence            334678999999986 5567999999999999999999988888654

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.2e-34  Score=329.08  Aligned_cols=92  Identities=25%  Similarity=0.396  Sum_probs=77.2

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhhc--------hhhHHHHHHhcCCCC
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLR--------HERIASLLEAYKPST  666 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~  666 (1310)
                      .++|+++..|.+|.||+|.+|..+. ++..||.|++.-.......+..|...|+.|+        |++|..+++.+....
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQ-GKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecC-CCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            4789999999999999999986654 7899999999877777788999999999998        788999999887554


Q ss_pred             cccchhhHHHHhhcCchhhhhh
Q psy5279         667 TASNIAVLVMEKLQGADVLSYL  688 (1310)
Q Consensus       667 ~~~~~~~~~~~~~~~~~~~~~~  688 (1310)
                      ......+||||++ |.+++.++
T Consensus       115 ~~~~~~~lv~e~~-~~~l~~~~  135 (397)
T 1wak_A          115 VNGTHICMVFEVL-GHHLLKWI  135 (397)
T ss_dssp             TTEEEEEEEECCC-CCBHHHHH
T ss_pred             CCCceEEEEEecc-CccHHHHH
Confidence            4456789999999 66666655

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.1e-34  Score=337.00  Aligned_cols=102  Identities=33%  Similarity=0.595  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++... +..+||+|||+++........  ...+||+.|+|||++.+..|+
T Consensus       164 ~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~  241 (400)
T 1nxk_A          164 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TTPCYTPYYVAPEVLGPEKYD  241 (400)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-------------CTTCCGGGSCCCCSS
T ss_pred             HHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCcc--ccCCCCCCccCHhhcCCCCCC
Confidence            45577999999999999999999999999998632 467999999999865433222  234568999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|||||||++|+|++|..||.+.
T Consensus       242 ~~~DiwslG~il~ell~g~~pf~~~  266 (400)
T 1nxk_A          242 KSCDMWSLGVIMYILLCGYPPFYSN  266 (400)
T ss_dssp             SHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred             CcccHHHHHHHHHHHHhCCCCCCCC
Confidence            9999999999999999999999764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=3.3e-34  Score=326.18  Aligned_cols=102  Identities=29%  Similarity=0.603  Sum_probs=77.9

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEee-cCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~-~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.||+.||.|||++||+||||||+|||++. .....+||+|||+++.......  .....||+.|+|||++.+..++.
T Consensus       152 ~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~  229 (349)
T 2w4o_A          152 DAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL--MKTVCGTPGYCAPEILRGCAYGP  229 (349)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------------------CGGGSCHHHHTTCCCCT
T ss_pred             HHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc--cccccCCCCccCHHHhcCCCCCc
Confidence            34679999999999999999999999999975 2356799999999876543221  22345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|||||||++|+|++|..||.+..
T Consensus       230 ~~DiwslG~il~ell~g~~pf~~~~  254 (349)
T 2w4o_A          230 EVDMWSVGIITYILLCGFEPFYDER  254 (349)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTCCTT
T ss_pred             ccchHHHHHHHHHHHhCCCCCCCCc
Confidence            9999999999999999999997643

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=2.6e-34  Score=323.23  Aligned_cols=102  Identities=24%  Similarity=0.447  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC-
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI- 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y- 1026 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ...+||+|||+++....... .......||+.|+|||++.+..+ 
T Consensus       108 ~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  185 (323)
T 3tki_A          108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH  185 (323)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--TCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBC
T ss_pred             HHHHHHHHHHHHHHHHCCccccccchHHEEEeC--CCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCC
Confidence            345679999999999999999999999999975  45799999999976543221 11223467899999999987776 


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      +.++|||||||++|+|++|..||.+.
T Consensus       186 ~~~~DiwslG~il~~ll~g~~pf~~~  211 (323)
T 3tki_A          186 AEPVDVWSCGIVLTAMLAGELPWDQP  211 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred             CCcccHHHHHHHHHHHHhCCCCCCCC
Confidence            56789999999999999999998643

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=2.6e-34  Score=328.39  Aligned_cols=102  Identities=24%  Similarity=0.430  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....    ....+||+.|+|||++.+..|+.
T Consensus       144 ~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~--~g~~kL~DFg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~  217 (350)
T 1rdq_E          144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ--QGYIQVTDFGFAKRVKGR----TWTLCGTPEALAPEIILSKGYNK  217 (350)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TSCEEECCCTTCEECSSC----BCCCEECGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHHCCcccccCccceEEECC--CCCEEEcccccceeccCC----cccccCCccccCHHHhcCCCCCC
Confidence            345679999999999999999999999999975  467999999999865432    12335789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++|||||||++|+|++|.+||.+.+..+
T Consensus       218 ~~DiwslG~il~ell~g~~Pf~~~~~~~  245 (350)
T 1rdq_E          218 AVDWWALGVLIYEMAAGYPPFFADQPIQ  245 (350)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             cCCEecccHhHhHHhhCCCCCCCCCHHH
Confidence            9999999999999999999998765443

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=5.2e-34  Score=310.55  Aligned_cols=105  Identities=31%  Similarity=0.645  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.||+.||.|||++||+||||||+|||++..+ ...+||+|||++.........  ....|++.|+|||++.+..++.
T Consensus       109 ~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~  186 (284)
T 3kk8_A          109 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAGTPGYLSPEVLKKDPYSK  186 (284)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBC--CCSCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccc--cCCCCCcCCcCchhhcCCCCCc
Confidence            3466999999999999999999999999997643 346999999999765433222  2345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++|||||||++|+|++|..||.+.+...
T Consensus       187 ~~Di~slG~~l~~l~~g~~pf~~~~~~~  214 (284)
T 3kk8_A          187 PVDIWACGVILYILLVGYPPFWDEDQHR  214 (284)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ccchHHHHHHHHHHHHCCCCCCCCchhH
Confidence            9999999999999999999998765443

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=5e-34  Score=325.18  Aligned_cols=100  Identities=30%  Similarity=0.499  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+. .....+||+.|+|||++.+..|+.
T Consensus       113 ~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~--~g~~kL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  189 (345)
T 3a8x_A          113 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGD-TTSTFCGTPNYIAPEILRGEDYGF  189 (345)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT--TSCEEECCGGGCBCSCCTTC-CBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCHHHEEECC--CCCEEEEeccccccccCCCC-cccccCCCccccCccccCCCCCCh
Confidence            445679999999999999999999999999975  46799999999975432222 223346789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ++|||||||++|+|++|..||.+
T Consensus       190 ~~DiwslG~il~ell~g~~pf~~  212 (345)
T 3a8x_A          190 SVDWWALGVLMFEMMAGRSPFDI  212 (345)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             HHhHHHHHHHHHHHHhCCCCcCC
Confidence            99999999999999999999964

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=7.6e-34  Score=321.04  Aligned_cols=108  Identities=27%  Similarity=0.464  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEee-----------------------cCCCcEEEEeeccceeeccCCccc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-----------------------VRSVQVKLIDLGCTQRVTKLGTLI 1005 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~-----------------------~~~~~VKL~DFGlAk~~~~~g~~~ 1005 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.                       .....+||+|||+++.....    
T Consensus       140 ~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----  215 (360)
T 3llt_A          140 KLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----  215 (360)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----
T ss_pred             HHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC----
Confidence            446779999999999999999999999999974                       23567999999999754322    


Q ss_pred             ccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhh
Q psy5279        1006 HPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060 (1310)
Q Consensus      1006 ~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~ 1060 (1310)
                      .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....
T Consensus       216 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  270 (360)
T 3llt_A          216 HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAM  270 (360)
T ss_dssp             CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHH
Confidence            1234578999999999999999999999999999999999999998776555443

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.3e-34  Score=322.38  Aligned_cols=92  Identities=29%  Similarity=0.448  Sum_probs=78.7

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeeccc------CcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcc
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY------SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTA  668 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  668 (1310)
                      .++|++...|.+|.||+|.+|..+. ++..||.|++.-      +.+....+..|...|+.|+|+||..+++.+...   
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~---  100 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQ-TRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE---  100 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred             hhheeecceeeecCCeEEEEEEECC-CCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC---
Confidence            4689999999999999999987654 788999999853      356778899999999999999999999998654   


Q ss_pred             cchhhHHHHhhcCchhhhhhhcc
Q psy5279         669 SNIAVLVMEKLQGADVLSYLSSR  691 (1310)
Q Consensus       669 ~~~~~~~~~~~~~~~~~~~~~~~  691 (1310)
                       +...||||+|.|.++..+|...
T Consensus       101 -~~~~lv~e~~~gg~L~~~l~~~  122 (345)
T 3hko_A          101 -QYICLVMELCHGGHLLDKLNVF  122 (345)
T ss_dssp             -SEEEEEEECCCSCBHHHHEEEE
T ss_pred             -CeEEEEEeCCCCCcHHHHHHHh
Confidence             6688999999999999888654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.1e-34  Score=315.07  Aligned_cols=103  Identities=27%  Similarity=0.577  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC--
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP-- 1025 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~-- 1025 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++........ .....||+.|+|||++.+..  
T Consensus       139 ~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~  215 (298)
T 2zv2_A          139 ARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGE--DGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPESLSETRKI  215 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--TSCEEECCCTTCEECSSSSCE-ECCCCSCGGGCCGGGCCTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC--CCCEEEecCCCcccccccccc-ccCCcCCccccChhhhccCCCC
Confidence            3456789999999999999999999999999975  457999999999866433221 22346789999999998765  


Q ss_pred             -CCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1026 -IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1026 -ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                       ++.++|||||||++|+|++|..||.+.+
T Consensus       216 ~~~~~~Di~slG~~l~~l~~g~~pf~~~~  244 (298)
T 2zv2_A          216 FSGKALDVWAMGVTLYCFVFGQCPFMDER  244 (298)
T ss_dssp             EESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             CCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence             3678999999999999999999997654

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=4.9e-34  Score=327.31  Aligned_cols=109  Identities=23%  Similarity=0.400  Sum_probs=88.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc------cccCCCCCCcccccccc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL------IHPINTPNPEFAAPEVL 1021 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~------~~~~~tGtp~Y~APEvl 1021 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++......+..      ......||+.|+|||++
T Consensus       130 ~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  207 (389)
T 3gni_B          130 IAYILQGVLKALDYIHHMGYVHRSVKASHILISV--DGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVL  207 (389)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEcccccceeeccccccccccccccccccccccccCHHHH
Confidence            3456789999999999999999999999999975  457999999988654322211      11223577899999999


Q ss_pred             cC--CCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279        1022 AE--EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus      1022 ~~--~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      .+  ..|+.++|||||||++|+|++|..||.+.+.....
T Consensus       208 ~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  246 (389)
T 3gni_B          208 QQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML  246 (389)
T ss_dssp             STTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH
T ss_pred             hccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence            88  57999999999999999999999999886655443

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.98  E-value=3.5e-34  Score=335.81  Aligned_cols=104  Identities=25%  Similarity=0.478  Sum_probs=86.0

Q ss_pred             HHHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||+|||+ +|||||||||+|||++.  ++.+||+|||+++.....+. ......||+.|+|||++.+..|+
T Consensus       251 ~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~--~~~~kl~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~  327 (446)
T 4ejn_A          251 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK--DGHIKITDFGLCKEGIKDGA-TMKTFCGTPEYLAPEVLEDNDYG  327 (446)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECS--SSCEEECCCCCCCTTCC------CCSSSCGGGCCHHHHHTSCCC
T ss_pred             HHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECC--CCCEEEccCCCceeccCCCc-ccccccCCccccCHhhcCCCCCC
Confidence            4456799999999998 99999999999999985  45799999999875332222 22334678999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      .++|||||||++|+|++|..||.+.+..
T Consensus       328 ~~~DiwslG~il~ell~g~~Pf~~~~~~  355 (446)
T 4ejn_A          328 RAVDWWGLGVVMYEMMCGRLPFYNQDHE  355 (446)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             CccchhhhHHHHHHHhhCCCCCCCCCHH
Confidence            9999999999999999999999876543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.98  E-value=3e-34  Score=321.70  Aligned_cols=107  Identities=21%  Similarity=0.399  Sum_probs=84.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++........ ......||+.|+|||++.+ ..++
T Consensus       103 ~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~--~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~  179 (324)
T 3mtl_A          103 KLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINE--RGELKLADFGLARAKSIPTK-TYDNEVVTLWYRPPDILLGSTDYS  179 (324)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEESSCCGGGEEECT--TCCEEECSSSEEECC-------------CGGGCCHHHHTTCCCCC
T ss_pred             HHHHHHHHHHHHHHHHCCccCCCcCHHHEEECC--CCCEEEccCcccccccCCcc-ccccccCcccccChhhhcCCCCCC
Confidence            446779999999999999999999999999975  45799999999875432221 1222356799999999987 5689


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      .++|||||||++|+|++|..||.+.+..+..
T Consensus       180 ~~~DiwslG~il~~l~~g~~pf~~~~~~~~~  210 (324)
T 3mtl_A          180 TQIDMWGVGCIFYEMATGRPLFPGSTVEEQL  210 (324)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            9999999999999999999999987765543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.98  E-value=8.2e-34  Score=318.80  Aligned_cols=108  Identities=19%  Similarity=0.306  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeec---CCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV---RSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE- 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~---~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~- 1024 (1310)
                      ..++.||+.||.|||++||+||||||+|||++..   ....+||+|||+++....... ......+|+.|+|||++.+. 
T Consensus       135 ~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~  213 (329)
T 3gbz_A          135 KSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR-QFTHEIITLWYRPPEILLGSR  213 (329)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC------------CCTTCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc-ccCCCcCCccccCHHHhcCCC
Confidence            3456799999999999999999999999999642   234699999999875532211 11223467999999999875 


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++.++|||||||++|+|++|..||.+.+..+.
T Consensus       214 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  246 (329)
T 3gbz_A          214 HYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ  246 (329)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH
Confidence            489999999999999999999999988765544

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.98  E-value=8.1e-34  Score=319.43  Aligned_cols=104  Identities=29%  Similarity=0.514  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.....+.. .....||+.|+|||++.+..++.
T Consensus       124 ~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~  200 (327)
T 3a62_A          124 CFYLAEISMALGHLHQKGIIYRDLKPENIMLNH--QGHVKLTDFGLCKESIHDGTV-THTFCGTIEYMAPEILMRSGHNR  200 (327)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECT--TSCEEECCCSCC-----------CTTSSCCTTSCHHHHTTSCCCT
T ss_pred             HHHHHHHHHHHHHHHhCCEEcccCCHHHeEECC--CCcEEEEeCCcccccccCCcc-ccccCCCcCccCHhhCcCCCCCC
Confidence            345679999999999999999999999999975  457999999998754322221 22345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      ++|||||||++|+|++|..||.+.+..
T Consensus       201 ~~DiwslG~il~el~~g~~pf~~~~~~  227 (327)
T 3a62_A          201 AVDWWSLGALMYDMLTGAPPFTGENRK  227 (327)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             cccchhHHHHHHHHHHCCCCCCCCCHH
Confidence            999999999999999999999876543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.98  E-value=4.3e-34  Score=313.96  Aligned_cols=99  Identities=20%  Similarity=0.301  Sum_probs=79.4

Q ss_pred             CCccccCC-CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCc--chhhhhhHHhhhhhhhchhhHHHHHHhc
Q psy5279         586 PIEWSTEP-PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH--DTLHQVNTEFDNLRSLRHERIASLLEAY  662 (1310)
Q Consensus       586 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  662 (1310)
                      |..|.+.. -.+.|++...|.+|.||.|.+|..+. ++..+|.|.+.-..  ....++..|...|++|+|++|..+++.+
T Consensus        11 ~~~~~~~g~i~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   89 (285)
T 3is5_A           11 RENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERS-SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF   89 (285)
T ss_dssp             --CCEESSCHHHHEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cccCCCCCChhhheeecceeccCCCeEEEEEEEcc-CCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhe
Confidence            33444433 45789999999999999999887665 78889999986543  4567889999999999999999999988


Q ss_pred             CCCCcccchhhHHHHhhcCchhhhhhh
Q psy5279         663 KPSTTASNIAVLVMEKLQGADVLSYLS  689 (1310)
Q Consensus       663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  689 (1310)
                      ...    ....+|||+|.|.+++.++.
T Consensus        90 ~~~----~~~~lv~e~~~~~~L~~~l~  112 (285)
T 3is5_A           90 EDY----HNMYIVMETCEGGELLERIV  112 (285)
T ss_dssp             ECS----SEEEEEECCCSCCBHHHHHH
T ss_pred             ecC----CeEEEEEEeCCCCcHHHHHH
Confidence            755    55789999999998877654

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.98  E-value=3.7e-32  Score=307.71  Aligned_cols=224  Identities=24%  Similarity=0.299  Sum_probs=179.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ...++|++.+.||+|+||.||+|.+..+|+.||||++....  ....+.+.+|+.+|+.++||||+++++++.+.+.+|+
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l   91 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL   91 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence            45678999999999999999999999999999999997542  2345568899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      |||||+||+|.+.+...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.......
T Consensus        92 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~~  169 (328)
T 3fe3_A           92 IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM--NIKIADFGFSNEFTVGGK  169 (328)
T ss_dssp             EECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--CEEECSTTCCGGGSSSCG
T ss_pred             EEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCC--CEEEeeccCceecCCCCc
Confidence            999999999999998888899999999999999999999999999999999999998655  799999999998877667


Q ss_pred             CCCcccchHHHhhhcCCCccccCCC---------------------CCCCCCCCcchhhh-hh-----------hcccch
Q psy5279         338 LNPLEYDVRYVRQALRHPWLNFADR---------------------KPTEDTPKLNTDAL-RN-----------YYNLYK  384 (1310)
Q Consensus       338 l~~~~~t~~yv~~~~r~P~l~~~~~---------------------~~~~~~p~~~~~~~-~~-----------~~~~~~  384 (1310)
                      ....++|+.|+++.     +..+..                     .+.+.  ..+...+ ..           ....+.
T Consensus       170 ~~~~~gt~~y~aPE-----~~~~~~~~~~~~DiwslG~il~ell~g~~pf~--~~~~~~~~~~i~~~~~~~p~~~s~~~~  242 (328)
T 3fe3_A          170 LDAFCGAPPYAAPE-----LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD--GQNLKELRERVLRGKYRIPFYMSTDCE  242 (328)
T ss_dssp             GGTTSSSGGGCCHH-----HHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSC--CSSHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred             cccccCCcceeCcc-----cccCCCcCCchhhhhhhHHHHHHHHhCCCCCC--CCCHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            77778887765542     211111                     11111  0011111 00           112234


Q ss_pred             hhchhhhhhhcccCCCCCCccCCCccee
Q psy5279         385 DWYGNAAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       385 D~~~~~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      |.+...+..+..+|+|+.+++.|||+..
T Consensus       243 ~li~~~L~~dP~~R~t~~eil~h~~~~~  270 (328)
T 3fe3_A          243 NLLKRFLVLNPIKRGTLEQIMKDRWINA  270 (328)
T ss_dssp             HHHHHHCCSSTTTSCCHHHHTTCTTTTT
T ss_pred             HHHHHHCCCChhHCcCHHHHhcCHhhcC
Confidence            5555666667889999999999999854

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.98  E-value=6.6e-34  Score=339.18  Aligned_cols=98  Identities=21%  Similarity=0.370  Sum_probs=80.4

Q ss_pred             cccCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCc----chhhhhhHHhhhhhhhchhhHHHHHHhcCC
Q psy5279         589 WSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH----DTLHQVNTEFDNLRSLRHERIASLLEAYKP  664 (1310)
Q Consensus       589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  664 (1310)
                      +.....-+.|.....|.+|.||.|.+|..+. ++..||.|++....    +....+..|...|+.|+|+||..+++.+..
T Consensus         9 ~~~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~-~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~   87 (476)
T 2y94_A            9 HDGRVKIGHYILGDTLGVGTFGKVKVGKHEL-TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST   87 (476)
T ss_dssp             CCSCCEETTEEEEEEEECCSSSCEEEEEETT-TCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             cCCCceecCEEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence            3334455789999999999999999887665 88999999986542    445678899999999999999999999876


Q ss_pred             CCcccchhhHHHHhhcCchhhhhhhcc
Q psy5279         665 STTASNIAVLVMEKLQGADVLSYLSSR  691 (1310)
Q Consensus       665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  691 (1310)
                      .    +...||||+|.|.++..++..+
T Consensus        88 ~----~~~~lv~E~~~gg~L~~~l~~~  110 (476)
T 2y94_A           88 P----SDIFMVMEYVSGGELFDYICKN  110 (476)
T ss_dssp             S----SEEEEEEECCSSEEHHHHTTSS
T ss_pred             C----CEEEEEEeCCCCCcHHHHHHhc
Confidence            6    4578999999999987776543

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.98  E-value=1.2e-33  Score=318.82  Aligned_cols=110  Identities=21%  Similarity=0.339  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC---cccccCCCCCCcccccccccCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG---TLIHPINTPNPEFAAPEVLAEE 1024 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g---~~~~~~~tGtp~Y~APEvl~~~ 1024 (1310)
                      +..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++......   ........||+.|+|||++.+.
T Consensus       126 ~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  203 (351)
T 3mi9_A          126 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR--DGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE  203 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC--CCCEEEccchhcccccccccccccccCCcccccCccCchhhcCC
Confidence            3456789999999999999999999999999975  4579999999997654221   1112234568999999999864


Q ss_pred             -CCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1025 -PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1025 -~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                       .++.++|||||||++|+|++|.+||.+.+......
T Consensus       204 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  239 (351)
T 3mi9_A          204 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA  239 (351)
T ss_dssp             CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             CCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence             58899999999999999999999999877655443

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.98  E-value=8.6e-34  Score=330.97  Aligned_cols=101  Identities=30%  Similarity=0.535  Sum_probs=73.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC---C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE---E 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~---~ 1024 (1310)
                      ..++.||+.||.|||++||+||||||+|||++..+ ...+||+|||+++.......  .....||+.|+|||++.+   .
T Consensus       242 ~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~  319 (419)
T 3i6u_A          242 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL--MRTLCGTPTYLAPEVLVSVGTA  319 (419)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-------------CTTCCTTTTC----C
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCcc--ccccCCCCCccCceeeecCCCC
Confidence            34567999999999999999999999999997532 45699999999976543222  223457899999999853   4


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      .|+.++|||||||++|+|++|.+||.+
T Consensus       320 ~~~~~~DiwslG~il~~lltg~~pf~~  346 (419)
T 3i6u_A          320 GYNRAVDCWSLGVILFICLSGYPPFSE  346 (419)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            566677888888888888888777743

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.98  E-value=1.3e-33  Score=324.29  Aligned_cols=106  Identities=22%  Similarity=0.466  Sum_probs=81.0

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.....    .....||+.|+|||++.+ ..+
T Consensus       134 ~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~--~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~  207 (367)
T 2fst_X          134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTADE----MTGYVATRWYRAPEIMLNWMHY  207 (367)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TCCEEECC-------------------CCCTTCCHHHHTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECC--CCCEEEeecccccccccc----CCCcCcCcCccChHHHcCCcCC
Confidence            4566789999999999999999999999999975  567999999998764322    122357899999999987 678


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      +.++|||||||++|+|++|.+||.+.+..+...
T Consensus       208 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~  240 (367)
T 2fst_X          208 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK  240 (367)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            899999999999999999999999877655433

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.98  E-value=1.2e-33  Score=326.26  Aligned_cols=106  Identities=25%  Similarity=0.498  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++....... .....+||+.|+|||++.+..|+.
T Consensus       142 ~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~--~g~ikL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  218 (373)
T 2r5t_A          142 RFYAAEIASALGYLHSLNIVYRDLKPENILLDS--QGHIVLTDFGLCKENIEHNS-TTSTFCGTPEYLAPEVLHKQPYDR  218 (373)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TSCEEECCCCBCGGGBCCCC-CCCSBSCCCCCCCHHHHTTCCCCT
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCHHHEEECC--CCCEEEeeCccccccccCCC-ccccccCCccccCHHHhCCCCCCc
Confidence            445679999999999999999999999999975  56799999999875332221 223346789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ++|||||||++|+|++|..||.+.+..++
T Consensus       219 ~~DiwslG~il~ell~G~~Pf~~~~~~~~  247 (373)
T 2r5t_A          219 TVDWWCLGAVLYEMLYGLPPFYSRNTAEM  247 (373)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTCCSBHHHH
T ss_pred             hhhhHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence            99999999999999999999987654433

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=1.7e-32  Score=308.66  Aligned_cols=231  Identities=23%  Similarity=0.415  Sum_probs=181.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||+|++.... .....+.+|+.+|+.++|||||+++++|.+.+.+|+||
T Consensus         2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~   80 (321)
T 1tki_A            2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF   80 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence            46789999999999999999999999999999999997543 34556889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      |||+||+|.+.+.... .+++.++..++.||+.||.|||++||+||||||+|||++.+++..+||+|||+|+.+......
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~  160 (321)
T 1tki_A           81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred             EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence            9999999999997654 699999999999999999999999999999999999998644568999999999988665554


Q ss_pred             CCcccchHHHhhh-------------------------cCCCccccCCCCC----CCCCCCcchhhhhhhcccchhhchh
Q psy5279         339 NPLEYDVRYVRQA-------------------------LRHPWLNFADRKP----TEDTPKLNTDALRNYYNLYKDWYGN  389 (1310)
Q Consensus       339 ~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~~D~~~~  389 (1310)
                      ...++|+.|+++.                         +..||........    ......+....+..+...+.|++..
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  240 (321)
T 1tki_A          161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR  240 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHT
T ss_pred             ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHH
Confidence            5556666554432                         2333322110000    0000111122223344455677777


Q ss_pred             hhhhhcccCCCCCCccCCCcce
Q psy5279         390 AAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       390 ~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      .+..+...|+++.+++.|||+.
T Consensus       241 ~L~~dp~~Rpt~~e~l~hp~~~  262 (321)
T 1tki_A          241 LLVKERKSRMTASEALQHPWLK  262 (321)
T ss_dssp             TSCSSGGGSCCHHHHHHSHHHH
T ss_pred             HcCCChhHCcCHHHHhcChhhc
Confidence            7777899999999999999974

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.98  E-value=2.6e-32  Score=314.45  Aligned_cols=198  Identities=22%  Similarity=0.362  Sum_probs=156.5

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCC-----CcEEEEEEEecCCc-chHHHHHHHHHHHHhcCC-CCcceEEEEEEeC-C
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSS-----GRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCH-RNLVRLHDSYETK-D  253 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~T-----g~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~H-PNIVkL~d~f~~~-~  253 (1310)
                      .++|++.+.||+|+||+||+|.++.+     ++.||||++..... ...+.+.+|+.+|++|.| ||||+++++|..+ +
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~  142 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  142 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence            47899999999999999999998754     46899999975433 345678999999999965 9999999999764 6


Q ss_pred             eEEEEEecCCCCchHHHhhhc----------------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC
Q psy5279         254 SFTIISELAGGGELLHSLTRQ----------------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG  317 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~----------------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~  317 (1310)
                      .+|||||||+||+|.+++...                ..+++.++..++.||+.||+|||+++||||||||+|||+++++
T Consensus       143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~  222 (353)
T 4ase_A          143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN  222 (353)
T ss_dssp             CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCC
Confidence            799999999999999998642                3489999999999999999999999999999999999998765


Q ss_pred             CCeEEEEeeccceeecCCCC---CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhh
Q psy5279         318 GRHLLLTDFGLSRRITSFGK---LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAV  392 (1310)
Q Consensus       318 ~~~VKLsDFGLAr~i~~~~~---l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l  392 (1310)
                        .+||+|||+||.+.....   ....++|+.|++     |++..                 ...|+...| | +|+.+.
T Consensus       223 --~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymA-----PE~l~-----------------~~~y~~ksDVwS~Gv~l~  278 (353)
T 4ase_A          223 --VVKICDFGLARDIYKDPDYVRKGDARLPLKWMA-----PETIF-----------------DRVYTIQSDVWSFGVLLW  278 (353)
T ss_dssp             --CEEECCCGGGSCTTTCTTSEEETTEEECGGGCC-----HHHHH-----------------HCCCCHHHHHHHHHHHHH
T ss_pred             --CEEECcchhhhhcccCCCceeeccccccccccC-----HHHHh-----------------cCCCCCcccEeehHHHHH
Confidence              899999999997754332   234566766664     44321                 123555567 4 677777


Q ss_pred             hhcc-cCCCCCC
Q psy5279         393 RRYY-RRRPLNS  403 (1310)
Q Consensus       393 ~~~~-~r~~~~~  403 (1310)
                      +.++ .+.|..+
T Consensus       279 El~t~G~~Pf~~  290 (353)
T 4ase_A          279 EIFSLGASPYPG  290 (353)
T ss_dssp             HHTTTSCCSSTT
T ss_pred             HHHhCCCCCCCC
Confidence            7665 4555433

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.98  E-value=1e-33  Score=307.72  Aligned_cols=90  Identities=26%  Similarity=0.346  Sum_probs=74.9

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeecccC-cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchhh
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS-HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAV  673 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  673 (1310)
                      .+.|+....|.+|.||.|.+|..+. ++..+|+|.+... .+....+..|...|++|+|++|..+++.+...    +...
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~~~   82 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKG-TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN----TDIY   82 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS----SEEE
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCC-CCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC----CeEE
Confidence            4679999999999999999987665 7778899887643 45677889999999999999999999988654    5578


Q ss_pred             HHHHhhcCchhhhhhh
Q psy5279         674 LVMEKLQGADVLSYLS  689 (1310)
Q Consensus       674 ~~~~~~~~~~~~~~~~  689 (1310)
                      +|||++.|.++..++.
T Consensus        83 lv~e~~~~~~L~~~~~   98 (277)
T 3f3z_A           83 LVMELCTGGELFERVV   98 (277)
T ss_dssp             EEEECCCSCBHHHHHH
T ss_pred             EEEeccCCCcHHHHHH
Confidence            9999999988776654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.97  E-value=1.9e-33  Score=321.78  Aligned_cols=108  Identities=23%  Similarity=0.420  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.......  .....||+.|+|||++.+..++.
T Consensus       130 ~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~--~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~  205 (371)
T 2xrw_A          130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKE  205 (371)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT--TSCEEECCCCC------------------CTTCCHHHHTTCCCCT
T ss_pred             HHHHHHHHHHHHHHHHCCeecccCCHHHEEEcC--CCCEEEEEeecccccccccc--cCCceecCCccCHHHhcCCCCCc
Confidence            345679999999999999999999999999985  45799999999976543221  22345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~ 1060 (1310)
                      ++|||||||++|+|++|..||.+.+..+....
T Consensus       206 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  237 (371)
T 2xrw_A          206 NVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK  237 (371)
T ss_dssp             THHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             hHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            99999999999999999999998876655443

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.97  E-value=6.3e-34  Score=315.08  Aligned_cols=104  Identities=30%  Similarity=0.532  Sum_probs=79.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCC-CcEEEEeeccceeeccCCc------ccccCCCCCCcccccccc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS-VQVKLIDLGCTQRVTKLGT------LIHPINTPNPEFAAPEVL 1021 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~-~~VKL~DFGlAk~~~~~g~------~~~~~~tGtp~Y~APEvl 1021 (1310)
                      ..++.||+.||.|||++||+||||||+|||++..+. ..+||+|||++......+.      .......||+.|+|||++
T Consensus       114 ~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  193 (316)
T 2ac3_A          114 SVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV  193 (316)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHh
Confidence            345679999999999999999999999999986432 3599999999875432111      111223478999999999


Q ss_pred             cC-----CCCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1022 AE-----EPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1022 ~~-----~~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .+     ..++.++|||||||++|+|++|..||.+.
T Consensus       194 ~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~  229 (316)
T 2ac3_A          194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR  229 (316)
T ss_dssp             HHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred             hcccccccCCCcccccHhHHHHHHHHHHCCCCCccc
Confidence            75     45788999999999999999999999764

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.97  E-value=3.8e-33  Score=345.34  Aligned_cols=106  Identities=29%  Similarity=0.542  Sum_probs=90.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++|||||||||+|||++.  ++.+||+|||+++.....+. ......||+.|+|||++.+..|+.
T Consensus       445 ~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~--~g~ikL~DFGla~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~  521 (674)
T 3pfq_A          445 VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGK  521 (674)
T ss_dssp             HHHHHHHHHHHHHHHHTSEECCCCCSTTEEECS--SSCEEECCCTTCEECCCTTC-CBCCCCSCSSSCCHHHHTCCCBST
T ss_pred             HHHHHHHHHHHHHHHhCCeEeccCChhhEEEcC--CCcEEEeecceeeccccCCc-ccccccCCCcccCHhhhcCCCCCc
Confidence            445679999999999999999999999999986  46799999999986433222 233456889999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ++|||||||++|+|++|.+||.+.+..++
T Consensus       522 ~~DvwSlGvilyelltG~~Pf~~~~~~~~  550 (674)
T 3pfq_A          522 SVDWWAFGVLLYEMLAGQAPFEGEDEDEL  550 (674)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             cceEechHHHHHHHHcCCCCCCCCCHHHH
Confidence            99999999999999999999988765544

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.97  E-value=2e-33  Score=321.73  Aligned_cols=97  Identities=22%  Similarity=0.282  Sum_probs=81.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC----
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE---- 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~---- 1024 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++....    ......| +.|+|||++.+.    
T Consensus       209 ~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~--~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~  281 (377)
T 3byv_A          209 LQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQ--RGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATIS  281 (377)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT--TCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTH
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEEechhheecCC----cccCCCC-cCccChhhhccccccc
Confidence            346789999999999999999999999999985  45799999999975322    1123346 899999999887    


Q ss_pred             -------CCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1025 -------PIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1025 -------~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                             .|+.++|||||||++|+|++|..||.+.
T Consensus       282 ~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~  316 (377)
T 3byv_A          282 YHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKD  316 (377)
T ss_dssp             HHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             ccccccccCChhhhHHHHHHHHHHHHHCCCCCccc
Confidence                   8999999999999999999999999643

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.97  E-value=4.7e-33  Score=325.98  Aligned_cols=109  Identities=23%  Similarity=0.331  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      +..++.||+.||.|||++|||||||||+|||++..+...+||+|||+++.....    .....||+.|+|||++.+..|+
T Consensus       202 ~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~  277 (429)
T 3kvw_A          202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR----VYTYIQSRFYRAPEVILGARYG  277 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC----CCSSCSCGGGCCHHHHHTBCCC
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCc----ccccCCCCCccChHHHhCCCCC
Confidence            345678999999999999999999999999998754445999999998754321    1223578999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~ 1060 (1310)
                      .++|||||||++|+|++|.+||.+.+..+....
T Consensus       278 ~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~  310 (429)
T 3kvw_A          278 MPIDMWSLGCILAELLTGYPLLPGEDEGDQLAC  310 (429)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             chHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            999999999999999999999999876655443

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.97  E-value=2.8e-33  Score=320.34  Aligned_cols=161  Identities=20%  Similarity=0.389  Sum_probs=120.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++..+......  ....||+.|+|||++.+.... 
T Consensus       203 ~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~--~~~ikl~DfG~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~-  277 (365)
T 2y7j_A          203 RSIMRSLLEAVSFLHANNIVHRDLKPENILLDD--NMQIRLSDFGFSCHLEPGEKL--RELCGTPGYLAPEILKCSMDE-  277 (365)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--TCCEEECCCTTCEECCTTCCB--CCCCSCGGGCCHHHHHHTTCT-
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEEEecCcccccCCCccc--ccCCCCCCccChhhccccccc-
Confidence            345679999999999999999999999999975  467999999998776543222  234577999999986422000 


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCccccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVK 1108 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~ 1108 (1310)
                                                                                                      
T Consensus       278 --------------------------------------------------------------------------------  277 (365)
T 2y7j_A          278 --------------------------------------------------------------------------------  277 (365)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcc
Q psy5279        1109 DLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1188 (1310)
Q Consensus      1109 ~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I 1188 (1310)
                                                              ...+|+.++||||+||++|+|++|.+||.+.+..+....+
T Consensus       278 ----------------------------------------~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i  317 (365)
T 2y7j_A          278 ----------------------------------------THPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI  317 (365)
T ss_dssp             ----------------------------------------TSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             ----------------------------------------cCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence                                                    0012445566666666666666666666666665555556


Q ss_pred             cccccccc-cchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccC
Q psy5279        1189 NFVRYRFE-YLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234 (1310)
Q Consensus      1189 ~~~~~~f~-~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~ 1234 (1310)
                      ....+.++ ..|..+|+++++||.+||..||.+|||++|+|+||||.
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          318 MEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             HHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             HhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence            55555553 45778999999999999999999999999999999985

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=2.9e-33  Score=309.07  Aligned_cols=107  Identities=22%  Similarity=0.392  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++......... .....|++.|+|||++.+ ..++
T Consensus       105 ~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~  181 (311)
T 4agu_A          105 KSITWQTLQAVNFCHKHNCIHRDVKPENILITK--HSVIKLCDFGFARLLTGPSDY-YDDEVATRWYRSPELLVGDTQYG  181 (311)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TSCEEECCCTTCEECC-------------GGGCCHHHHHTCSCCC
T ss_pred             HHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcC--CCCEEEeeCCCchhccCcccc-cCCCcCCccccChHHHhcCCCCC
Confidence            445679999999999999999999999999975  457999999999765432221 123356789999999986 5689


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      .++|||||||++|+|++|.+||.+.+..+..
T Consensus       182 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  212 (311)
T 4agu_A          182 PPVDVWAIGCVFAELLSGVPLWPGKSDVDQL  212 (311)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             cchhhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            9999999999999999999999987765543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.97  E-value=2.3e-33  Score=328.55  Aligned_cols=160  Identities=22%  Similarity=0.443  Sum_probs=130.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc-----
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA----- 1022 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~----- 1022 (1310)
                      +..++.||+.||+|||++|||||||||+|||++.  ++++||+|||+++.....+.......+||+.|+|||++.     
T Consensus       164 ~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~--~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~  241 (412)
T 2vd5_A          164 ARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR--CGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGG  241 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHCCeeecccCHHHeeecC--CCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccC
Confidence            3456779999999999999999999999999985  567999999999876554443334457889999999997     


Q ss_pred             --CCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccCCcchh---c
Q psy5279        1023 --EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEVDWI---T 1095 (1310)
Q Consensus      1023 --~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~~ri---t 1095 (1310)
                        ...|+.++|||||||++|+|++|..||.+.+..++..++....  ..++.....+|+++++||.+||.++.+|+   +
T Consensus       242 ~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~~p~~Rlgr~~  321 (412)
T 2vd5_A          242 PGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGRGG  321 (412)
T ss_dssp             TTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSSCGGGCTTTTT
T ss_pred             cCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcCChhhcCCCCC
Confidence              4568999999999999999999999999999888887776532  34454456799999999999998666664   8


Q ss_pred             HHhhhCCCcccccc
Q psy5279        1096 LANNIDHEFWHVKD 1109 (1310)
Q Consensus      1096 ~~e~L~H~f~~~~~ 1109 (1310)
                      +.+++.|+||...+
T Consensus       322 ~~ei~~Hpff~~i~  335 (412)
T 2vd5_A          322 AGDFRTHPFFFGLD  335 (412)
T ss_dssp             HHHHHTSGGGTTCC
T ss_pred             HHHHhcCCCcCCCC
Confidence            99999999987544

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.97  E-value=2.4e-33  Score=310.42  Aligned_cols=100  Identities=20%  Similarity=0.331  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-----------ccccCCCCCCccc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-----------LIHPINTPNPEFA 1016 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-----------~~~~~~tGtp~Y~ 1016 (1310)
                      +..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++.......           .......||+.|+
T Consensus       166 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  243 (332)
T 3qd2_B          166 CLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM--DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYM  243 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--TCCEEECCCTTCEECSCC--------------CCCSCC-CGGGS
T ss_pred             HHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeC--CCCEEEeecCcccccccchhhccccccccccccccccCCCcCcc
Confidence            4556789999999999999999999999999985  45799999999976643321           1122345789999


Q ss_pred             ccccccCCCCCCccchhHHHHHHHHHhcCCCCC
Q psy5279        1017 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPF 1049 (1310)
Q Consensus      1017 APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF 1049 (1310)
                      |||++.+..++.++|||||||++|+|++|..|+
T Consensus       244 aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~  276 (332)
T 3qd2_B          244 SPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ  276 (332)
T ss_dssp             CHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred             ChHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence            999999999999999999999999999986654

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.97  E-value=3.4e-33  Score=329.66  Aligned_cols=161  Identities=22%  Similarity=0.420  Sum_probs=134.0

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc-----
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA----- 1022 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~----- 1022 (1310)
                      +..++.||+.||+|||++|||||||||+|||++.  ++.+||+|||+++.....+.......+||+.|+|||++.     
T Consensus       177 ~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~--~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~  254 (437)
T 4aw2_A          177 ARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM--NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGG  254 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcC--CCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccC
Confidence            3456789999999999999999999999999985  567999999999876554444444457889999999997     


Q ss_pred             CCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccc--cccccccchhccHHHHHHHHHhccCCcc---hhcHH
Q psy5279        1023 EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFV--RYRFEYLFKELTQEATRFLMLIFKHEVD---WITLA 1097 (1310)
Q Consensus      1023 ~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~--~~~f~~~~~~lS~eakdLL~~il~~~~~---rit~~ 1097 (1310)
                      ...|+.++|||||||++|+|++|.+||.+.+..+...++...  .+.++..+..+|+++++||.+|+..+++   |.++.
T Consensus       255 ~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~  334 (437)
T 4aw2_A          255 KGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIE  334 (437)
T ss_dssp             CCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTH
T ss_pred             CCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHH
Confidence            556899999999999999999999999999988888777543  3455655667999999999999976554   67889


Q ss_pred             hhhCCCccccccc
Q psy5279        1098 NNIDHEFWHVKDL 1110 (1310)
Q Consensus      1098 e~L~H~f~~~~~l 1110 (1310)
                      +++.|+||...+.
T Consensus       335 eil~Hpff~~i~w  347 (437)
T 4aw2_A          335 DFKKHPFFSGIDW  347 (437)
T ss_dssp             HHHTSGGGTTCCT
T ss_pred             HHhCCCccCCCCH
Confidence            9999999975443

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.97  E-value=4e-33  Score=308.83  Aligned_cols=106  Identities=21%  Similarity=0.377  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-----------------CCcEEEEeeccceeeccCCcccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-----------------SVQVKLIDLGCTQRVTKLGTLIHPINTP 1011 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-----------------~~~VKL~DFGlAk~~~~~g~~~~~~~tG 1011 (1310)
                      ..++.||+.||+|||++||+||||||+|||++...                 ...+||+|||++......    .....|
T Consensus       121 ~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~g  196 (339)
T 1z57_A          121 RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH----HSTLVS  196 (339)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC----CCSSCS
T ss_pred             HHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc----cccccC
Confidence            44678999999999999999999999999997533                 456999999998764322    123457


Q ss_pred             CCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279        1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus      1012 tp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      |+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+..
T Consensus       197 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~  243 (339)
T 1z57_A          197 TRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL  243 (339)
T ss_dssp             CGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH
T ss_pred             CccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence            89999999999999999999999999999999999999987665543

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.97  E-value=1.5e-32  Score=305.96  Aligned_cols=100  Identities=23%  Similarity=0.424  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys~ 1028 (1310)
                      .++.||+.||.|||++||+||||||+|||++.. ...+||+|||+++........  ....+++.|+|||++.+ ..++.
T Consensus       134 ~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~-~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~  210 (330)
T 3nsz_A          134 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYHPGQEY--NVRVASRYFKGPELLVDYQMYDY  210 (330)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT-TTEEEECCCTTCEECCTTCCC--CSCCSCGGGCCHHHHTTCCCCCT
T ss_pred             HHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCC-CCEEEEEeCCCceEcCCCCcc--ccccccccccChhhhcCCCcCCc
Confidence            356799999999999999999999999999752 337999999999765433322  23456789999999987 67899


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|||||||++|+|++|..||...
T Consensus       211 ~~DiwslG~il~~ll~g~~p~~~~  234 (330)
T 3nsz_A          211 SLDMWSLGCMLASMIFRKEPFFHG  234 (330)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             hhhHHHHHHHHHHHHhCCCCcccC
Confidence            999999999999999999999544

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=5.3e-33  Score=318.91  Aligned_cols=109  Identities=22%  Similarity=0.436  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      +..++.||+.||.|||++||+||||||+|||++. .+..+||+|||+++........  ....+|+.|+|||++.+. .+
T Consensus       143 ~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~-~~~~~kl~Dfg~a~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~  219 (383)
T 3eb0_A          143 ISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS-KDNTLKLCDFGSAKKLIPSEPS--VAYICSRFYRAPELMLGATEY  219 (383)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEET-TTTEEEECCCTTCEECCTTSCC--CCCCCCSSCCCHHHHTTCSSC
T ss_pred             HHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcC-CCCcEEEEECCCCcccCCCCCC--cCcccCCCccCHHHhcCCCCC
Confidence            4556789999999999999999999999999974 2457999999999876443322  233567999999998875 48


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      +.++||||+||++|+|++|.+||.+.+..+...
T Consensus       220 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  252 (383)
T 3eb0_A          220 TPSIDLWSIGCVFGELILGKPLFSGETSIDQLV  252 (383)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             CcchhhhhHHHHHHHHHhCCCCCCCCChHHHHH
Confidence            999999999999999999999999877655433

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.97  E-value=1.9e-33  Score=316.31  Aligned_cols=100  Identities=21%  Similarity=0.323  Sum_probs=80.4

Q ss_pred             HHHHHHHHHHHHHHC--------CceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccc---ccCCCCCCcccccc
Q psy5279         951 CVTSVLDGLQYLHWR--------GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI---HPINTPNPEFAAPE 1019 (1310)
Q Consensus       951 i~~QIl~AL~yLHs~--------gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~---~~~~tGtp~Y~APE 1019 (1310)
                      ++.|++.||.|||++        |||||||||+|||++.  ++.+||+|||+|+.........   .....||+.|||||
T Consensus       105 i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~--~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE  182 (303)
T 3hmm_A          105 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK--NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE  182 (303)
T ss_dssp             HHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECT--TSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHH
T ss_pred             HHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECC--CCCEEEEeCCCCccccCCCCceeeecccccccccccCHH
Confidence            456999999999987        9999999999999985  5679999999998765432211   12346889999999


Q ss_pred             cccCC------CCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1020 VLAEE------PIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1020 vl~~~------~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++.+.      .|+.++|||||||++|||++|.+||...
T Consensus       183 ~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~  221 (303)
T 3hmm_A          183 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH  221 (303)
T ss_dssp             HHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBC
T ss_pred             HhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcc
Confidence            99765      3567899999999999999999998643

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.97  E-value=8.4e-32  Score=302.91  Aligned_cols=232  Identities=27%  Similarity=0.466  Sum_probs=180.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc------chHHHHHHHHHHHHhcCCCCcceEEEEEEeCC
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN------QYKSLFKNELDIMNQLCHRNLVRLHDSYETKD  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~------~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~  253 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||+|++.....      ...+.+.+|+.+|+.|+|||||+++++|.+.+
T Consensus         8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   87 (326)
T 2y0a_A            8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT   87 (326)
T ss_dssp             CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            567889999999999999999999999999999999975432      23567899999999999999999999999999


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC--CCeEEEEeecccee
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRR  331 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~--~~~VKLsDFGLAr~  331 (1310)
                      .+|+|||||+||+|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++.++  ...+||+|||+|+.
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  167 (326)
T 2y0a_A           88 DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  167 (326)
T ss_dssp             EEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence            9999999999999999998878899999999999999999999999999999999999997654  23799999999998


Q ss_pred             ecCCCCCCCcccchHHHhhh-------------------------cCCCccccCCCCCC----CCCCCcchhhhhhhccc
Q psy5279         332 ITSFGKLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKPT----EDTPKLNTDALRNYYNL  382 (1310)
Q Consensus       332 i~~~~~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~----~~~p~~~~~~~~~~~~~  382 (1310)
                      +.........++|+.|+++.                         +..||.........    .....+.......+...
T Consensus       168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (326)
T 2y0a_A          168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL  247 (326)
T ss_dssp             CCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHH
T ss_pred             CCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHH
Confidence            86655555666676665432                         22222210000000    00001111111223334


Q ss_pred             chhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         383 YKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       383 ~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +.|++...+..+...|+++.+++.|||..
T Consensus       248 ~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  276 (326)
T 2y0a_A          248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIK  276 (326)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHHSTTTS
T ss_pred             HHHHHHHHccCChhhCCCHHHHhcCCCcc
Confidence            46666677777889999999999999974

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.97  E-value=1e-32  Score=314.17  Aligned_cols=110  Identities=21%  Similarity=0.415  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccc--ccCCCCCCcccccccccCC-C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI--HPINTPNPEFAAPEVLAEE-P 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~--~~~~tGtp~Y~APEvl~~~-~ 1025 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++..........  .....||+.|+|||++.+. .
T Consensus       131 ~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  208 (364)
T 3qyz_A          131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG  208 (364)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--TCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCS
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCChHhEEECC--CCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCC
Confidence            445779999999999999999999999999975  4569999999997654322111  1234678999999987654 5


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhh
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~ 1060 (1310)
                      ++.++|||||||++|+|++|.+||.+.+..+....
T Consensus       209 ~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  243 (364)
T 3qyz_A          209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH  243 (364)
T ss_dssp             CSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHH
T ss_pred             CCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHH
Confidence            88999999999999999999999998876655433

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.97  E-value=1.2e-31  Score=301.82  Aligned_cols=197  Identities=20%  Similarity=0.200  Sum_probs=148.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC----eEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD----SFTII  258 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~----~lyLV  258 (1310)
                      .+|.+.++||+|+||+||+|.+  +|+.||||+++.... .....++|+.++.+|+|||||+++++|..++    .+|||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence            4588999999999999999986  689999999965421 1222345666778899999999999998764    68999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhC--------CeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL--------SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~--------gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      ||||+||+|.+.+... .+++.++..++.|++.||.|||++        +||||||||+||||+.++  .+||+|||||+
T Consensus        80 ~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~--~~Ki~DFGla~  156 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAV  156 (303)
T ss_dssp             EECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTS--CEEECCCTTCE
T ss_pred             ecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCC--CEEEEeCCCCc
Confidence            9999999999999754 689999999999999999999987        999999999999998665  89999999999


Q ss_pred             eecCCCC-----CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCC
Q psy5279         331 RITSFGK-----LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPL  401 (1310)
Q Consensus       331 ~i~~~~~-----l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~  401 (1310)
                      .......     ....+||+.|++     |++..+....         .  ..-++...| | +|..+...++++++.
T Consensus       157 ~~~~~~~~~~~~~~~~~GT~~ymA-----PE~l~~~~~~---------~--~~~~~~k~DVwS~Gvvl~El~tg~~~~  218 (303)
T 3hmm_A          157 RHDSATDTIDIAPNHRVGTKRYMA-----PEVLDDSINM---------K--HFESFKRADIYAMGLVFWEIARRCSIG  218 (303)
T ss_dssp             EEETTTTEESCC-----CCGGGCC-----HHHHTTCSCT---------T--CHHHHHHHHHHHHHHHHHHHHHTBCBT
T ss_pred             cccCCCCceeeecccccccccccC-----HHHhcccccc---------c--CCccChhHhhhhHHHHHHHHHHCCCCC
Confidence            8765432     233567776664     5543221100         0  011334456 5 677777777766553

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.97  E-value=6.1e-33  Score=309.94  Aligned_cols=106  Identities=22%  Similarity=0.423  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEee-----------------cCCCcEEEEeeccceeeccCCcccccCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-----------------VRSVQVKLIDLGCTQRVTKLGTLIHPINT 1010 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~-----------------~~~~~VKL~DFGlAk~~~~~g~~~~~~~t 1010 (1310)
                      ...++.||+.||.|||++||+||||||+|||+..                 .....+||+|||+++.....    .....
T Consensus       125 ~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~  200 (355)
T 2eu9_A          125 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH----HTTIV  200 (355)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC----CCSSC
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc----ccCCc
Confidence            3456789999999999999999999999999943                 13567999999999754322    12345


Q ss_pred             CCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1011 Gtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.
T Consensus       201 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  247 (355)
T 2eu9_A          201 ATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH  247 (355)
T ss_dssp             SCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             CCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            78999999999999999999999999999999999999998766544

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.97  E-value=5.3e-33  Score=300.88  Aligned_cols=102  Identities=24%  Similarity=0.447  Sum_probs=81.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC-
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI- 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y- 1026 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++........ .......|++.|+|||++.+..+ 
T Consensus       108 ~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  185 (276)
T 2yex_A          108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH  185 (276)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--TCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBC
T ss_pred             HHHHHHHHHHHHHHHhCCeeccCCChHHEEEcc--CCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCC
Confidence            345679999999999999999999999999985  45699999999876543221 11223457789999999987765 


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      +.++|||||||++|+|++|..||.+.
T Consensus       186 ~~~~Di~slG~il~~l~~g~~p~~~~  211 (276)
T 2yex_A          186 AEPVDVWSCGIVLTAMLAGELPWDQP  211 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCCCSCS
T ss_pred             CCcchHHHHHHHHHHHHhCCCCCCCC
Confidence            56789999999999999999998653

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.97  E-value=5.3e-33  Score=318.82  Aligned_cols=110  Identities=19%  Similarity=0.373  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHHHHH--HCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLH--WRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLH--s~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||.|||  +.|||||||||+|||++......+||+|||+++.....    .....||+.|+|||++.+..+
T Consensus       160 ~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~  235 (382)
T 2vx3_A          160 RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPY  235 (382)
T ss_dssp             HHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc----cccccCCccccChHHHcCCCC
Confidence            456789999999999  57999999999999997555677999999999765322    123457899999999999999


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhc
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1062 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~ 1062 (1310)
                      +.++|||||||++|+|++|.+||.+.+..+....+.
T Consensus       236 ~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~  271 (382)
T 2vx3_A          236 DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV  271 (382)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            999999999999999999999999988766655443

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.97  E-value=4e-33  Score=315.11  Aligned_cols=101  Identities=32%  Similarity=0.530  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHHHHHC-CceecccCCCcEEEeecC----CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC
Q psy5279         949 AYCVTSVLDGLQYLHWR-GLCHLNIEPDNVVMASVR----SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE 1023 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~-gIVHRDLKPeNILl~~~~----~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~ 1023 (1310)
                      ..++.||+.||.|||++ ||+||||||+|||++..+    ...+||+|||+++.....    .....||+.|+|||++.+
T Consensus       134 ~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~  209 (373)
T 1q8y_A          134 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLG  209 (373)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhC
Confidence            44577999999999998 999999999999996432    236999999999765432    122357899999999999


Q ss_pred             CCCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1024 EPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1024 ~~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ..++.++|||||||++|+|++|..||.+.+
T Consensus       210 ~~~~~~~Di~slG~il~el~~g~~pf~~~~  239 (373)
T 1q8y_A          210 APWGCGADIWSTACLIFELITGDFLFEPDE  239 (373)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             CCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence            999999999999999999999999998764

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.97  E-value=6.5e-33  Score=303.98  Aligned_cols=163  Identities=21%  Similarity=0.365  Sum_probs=125.9

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++.........  ....+++.|+|||++.+..    
T Consensus       128 ~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~----  199 (298)
T 1phk_A          128 KIMRALLEVICALHKLNIVHRDLKPENILLDD--DMNIKLTDFGFSCQLDPGEKL--REVCGTPSYLAPEIIECSM----  199 (298)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--TCCEEECCCTTCEECCTTCCB--CCCCSCGGGCCHHHHHHHH----
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCcceEEEcC--CCcEEEecccchhhcCCCccc--ccccCCccccCHHHhcccc----
Confidence            35679999999999999999999999999975  456999999998765432222  2234678888888753100    


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccc
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKD 1109 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~ 1109 (1310)
                                                                                             .        
T Consensus       200 -----------------------------------------------------------------------~--------  200 (298)
T 1phk_A          200 -----------------------------------------------------------------------N--------  200 (298)
T ss_dssp             -----------------------------------------------------------------------C--------
T ss_pred             -----------------------------------------------------------------------c--------
Confidence                                                                                   0        


Q ss_pred             cccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhccc
Q psy5279        1110 LKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN 1189 (1310)
Q Consensus      1110 l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~ 1189 (1310)
                                                            -....++.++||||+||++|+|++|..||.+.+..+....+.
T Consensus       201 --------------------------------------~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  242 (298)
T 1phk_A          201 --------------------------------------DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM  242 (298)
T ss_dssp             --------------------------------------TTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             --------------------------------------cccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHh
Confidence                                                  001125567888888888888888888888877777777777


Q ss_pred             ccccccc-cchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCCch
Q psy5279        1190 FVRYRFE-YLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237 (1310)
Q Consensus      1190 ~~~~~f~-~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~~~ 1237 (1310)
                      ...+.++ ..|..+|++.++||.+||..||.+|||++|+|+||||....
T Consensus       243 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          243 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             HTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             cCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            6666664 45678999999999999999999999999999999997543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.97  E-value=7.9e-32  Score=308.68  Aligned_cols=232  Identities=25%  Similarity=0.390  Sum_probs=181.2

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||+|++.....  ...+.+.+|+.+|+.|+|||||+++++|.+.+.+|+
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l  105 (362)
T 2bdw_A           26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL  105 (362)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            466889999999999999999999999999999999976533  344568899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccceeecCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |||||.||+|++.+.....+++.++..++.||+.||.|||++||+||||||+|||++.++ +..+||+|||+|+......
T Consensus       106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~  185 (362)
T 2bdw_A          106 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE  185 (362)
T ss_dssp             EECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred             EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence            999999999999998888899999999999999999999999999999999999998654 2469999999999887665


Q ss_pred             CCCCcccchHHHhhh-------------------------cCCCccccCCCCC----CCCCCCcchhhhhhhcccchhhc
Q psy5279         337 KLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKP----TEDTPKLNTDALRNYYNLYKDWY  387 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~~D~~  387 (1310)
                      .....++|+.|+++.                         +..||........    ......+....+..+...++|++
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  265 (362)
T 2bdw_A          186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI  265 (362)
T ss_dssp             SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHH
T ss_pred             ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHH
Confidence            566667777665532                         2223221100000    00000000111122333445666


Q ss_pred             hhhhhhhcccCCCCCCccCCCcce
Q psy5279         388 GNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       388 ~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ...+..+..+|+++.+++.|||+.
T Consensus       266 ~~~L~~dP~~R~t~~e~l~hp~~~  289 (362)
T 2bdw_A          266 DSMLTVNPKKRITADQALKVPWIC  289 (362)
T ss_dssp             HHHSCSSGGGSCCHHHHTTSHHHH
T ss_pred             HHHcCCChhhCcCHHHHhcCcccC
Confidence            666677789999999999999974

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.97  E-value=5.3e-33  Score=307.04  Aligned_cols=103  Identities=30%  Similarity=0.634  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEee-cCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~-~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.||+.||.|||++||+||||||+|||+.. +....+||+|||++...... ..  ....|++.|+|||++.+..++.
T Consensus       110 ~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-~~--~~~~~~~~y~aPE~~~~~~~~~  186 (304)
T 2jam_A          110 LVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-IM--STACGTPGYVAPEVLAQKPYSK  186 (304)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-TT--HHHHSCCCBCCTTTBSSCSCCH
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-cc--ccccCCCCccChHHhccCCCCc
Confidence            35679999999999999999999999999943 23567999999998654321 11  1224679999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      ++|||||||++|+|++|..||.+.+..
T Consensus       187 ~~Di~slG~il~~l~~g~~pf~~~~~~  213 (304)
T 2jam_A          187 AVDCWSIGVITYILLCGYPPFYEETES  213 (304)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCCCCHH
Confidence            999999999999999999999776543

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.97  E-value=4.4e-33  Score=326.04  Aligned_cols=158  Identities=23%  Similarity=0.402  Sum_probs=131.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC---
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP--- 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~--- 1025 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.....+.......+||+.|+|||++.+..   
T Consensus       171 ~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~--~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~  248 (410)
T 3v8s_A          171 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK--SGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDG  248 (410)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTC
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCCHHHeeECC--CCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCc
Confidence            445679999999999999999999999999975  567999999999876554433344557889999999998766   


Q ss_pred             -CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccchhccHHHHHHHHHhccCCcc---hhcHHhh
Q psy5279        1026 -IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLFKELTQEATRFLMLIFKHEVD---WITLANN 1099 (1310)
Q Consensus      1026 -ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~~~~~---rit~~e~ 1099 (1310)
                       |+.++|||||||++|+|++|.+||.+.+..++..++....  ..++. ...+|+++++||.+||..++.   |.++.++
T Consensus       249 ~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei  327 (410)
T 3v8s_A          249 YYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD-DNDISKEAKNLICAFLTDREVRLGRNGVEEI  327 (410)
T ss_dssp             EEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCT-TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHH
T ss_pred             CCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCC-cccccHHHHHHHHHHccChhhhCCCCCHHHH
Confidence             7889999999999999999999999999888888776543  23332 346899999999999986554   6899999


Q ss_pred             hCCCcccccc
Q psy5279        1100 IDHEFWHVKD 1109 (1310)
Q Consensus      1100 L~H~f~~~~~ 1109 (1310)
                      +.|+||...+
T Consensus       328 ~~Hp~f~~~~  337 (410)
T 3v8s_A          328 KRHLFFKNDQ  337 (410)
T ss_dssp             HTSGGGCCSS
T ss_pred             hcCccccCCC
Confidence            9999997654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.97  E-value=1.8e-32  Score=313.63  Aligned_cols=105  Identities=25%  Similarity=0.494  Sum_probs=85.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.....    .....||+.|+|||++.+ ..++
T Consensus       147 ~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~--~~~~kL~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~  220 (371)
T 4exu_A          147 QYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE--DCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYN  220 (371)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT--TCCEEECSTTCC------------CTTCCCTTSCHHHHSCCSCCC
T ss_pred             HHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECC--CCCEEEEecCcccccccC----cCCcccCccccCHHHhcCCCCCC
Confidence            456779999999999999999999999999975  457999999998754322    122356899999999987 6789


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      .++|||||||++|+|++|..||.+.+..+...
T Consensus       221 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  252 (371)
T 4exu_A          221 QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT  252 (371)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             cHHhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence            99999999999999999999999877655433

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.97  E-value=4.4e-33  Score=321.86  Aligned_cols=107  Identities=22%  Similarity=0.328  Sum_probs=82.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec--CCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV--RSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAE 1023 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~--~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~ 1023 (1310)
                      +..++.||+.||.|||++||+||||||+|||+...  ....+||+|||+++.......  .......||+.|+|||++.+
T Consensus       130 ~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  209 (405)
T 3rgf_A          130 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG  209 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcC
Confidence            45678899999999999999999999999999532  346799999999976542211  11223457899999999987


Q ss_pred             C-CCCCccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1024 E-PIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1024 ~-~ys~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      . .|+.++|||||||++|+|++|.+||.+.+.
T Consensus       210 ~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  241 (405)
T 3rgf_A          210 ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE  241 (405)
T ss_dssp             CCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC-
T ss_pred             CCcccchhhhHHHHHHHHHHHhCCCCCCCccc
Confidence            5 488999999999999999999999988754

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=9.7e-33  Score=312.18  Aligned_cols=108  Identities=22%  Similarity=0.326  Sum_probs=88.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++....... ......+|+.|+|||++.+. .+
T Consensus       114 ~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~--~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~  190 (346)
T 1ua2_A          114 IKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDE--NGVLKLADFGLAKSFGSPNR-AYTHQVVTRWYRAPELLFGARMY  190 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TCCEEECCCGGGSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCC
T ss_pred             HHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcC--CCCEEEEecccceeccCCcc-cCCcccccccccCchHhhCCCCC
Confidence            3456789999999999999999999999999975  45799999999976543222 12234578999999999764 58


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      +.++|||||||++|+|++|.+||.+.+..+..
T Consensus       191 ~~~~DiwslG~il~ell~g~~~~~~~~~~~~~  222 (346)
T 1ua2_A          191 GVGVDMWAVGCILAELLLRVPFLPGDSDLDQL  222 (346)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             CchhhhHhHHHHHHHHHHCCCCCCCCCHHHHH
Confidence            88999999999999999999999987765443

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.97  E-value=1.1e-31  Score=311.42  Aligned_cols=234  Identities=27%  Similarity=0.423  Sum_probs=183.3

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ..+.+.|++.+.||+|+||.||+|.++.+|+.||+|++..........+.+|+.+|+.|+|||||+++++|.+.+.+|+|
T Consensus        47 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv  126 (387)
T 1kob_A           47 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI  126 (387)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred             CccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence            35678999999999999999999999999999999999866555566788999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         259 SELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      ||||.||+|.+.+.... .+++.++..++.||+.||+|||++||+||||||+|||++.++...+||+|||+|+.+.....
T Consensus       127 ~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~  206 (387)
T 1kob_A          127 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI  206 (387)
T ss_dssp             EECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred             EEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence            99999999999987654 59999999999999999999999999999999999999865556899999999998866555


Q ss_pred             CCCcccchHHHhhh-------------------------cCCCccccCCCCCC----CCCCCcchhhhhhhcccchhhch
Q psy5279         338 LNPLEYDVRYVRQA-------------------------LRHPWLNFADRKPT----EDTPKLNTDALRNYYNLYKDWYG  388 (1310)
Q Consensus       338 l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~----~~~p~~~~~~~~~~~~~~~D~~~  388 (1310)
                      ....++|+.|+++.                         +..||.........    .....+....+..+...+.|++.
T Consensus       207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  286 (387)
T 1kob_A          207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIK  286 (387)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHH
T ss_pred             eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHH
Confidence            45556676665432                         22233211100000    00000111111223344567777


Q ss_pred             hhhhhhcccCCCCCCccCCCccee
Q psy5279         389 NAAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       389 ~~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      ..+..+...|+++.+++.|||+..
T Consensus       287 ~~L~~dP~~Rpt~~ell~hp~~~~  310 (387)
T 1kob_A          287 NLLQKEPRKRLTVHDALEHPWLKG  310 (387)
T ss_dssp             TTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred             HHcCCChhHCcCHHHHhhCccccC
Confidence            777778899999999999999854

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.97  E-value=5.2e-33  Score=302.55  Aligned_cols=104  Identities=36%  Similarity=0.738  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecC--CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR--SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~--~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .++.||+.||.|||++||+||||||+|||++..+  ...+||+|||++.........  ....+++.|+|||++.+..++
T Consensus       112 ~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~  189 (283)
T 3bhy_A          112 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIVNYEPLG  189 (283)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC----------CCCGGGCCHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcc--cccCCCcCccCcceecCCCCC
Confidence            4567999999999999999999999999997643  237999999998765432222  223467999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      .++|||||||++|+|++|..||.+.+..
T Consensus       190 ~~~Di~slG~il~~l~~g~~p~~~~~~~  217 (283)
T 3bhy_A          190 LEADMWSIGVITYILLSGASPFLGETKQ  217 (283)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             cchhhhhHHHHHHHHHHCCCCCCCcchH
Confidence            9999999999999999999999876543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.97  E-value=9.4e-33  Score=302.60  Aligned_cols=100  Identities=22%  Similarity=0.302  Sum_probs=81.5

Q ss_pred             cccCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeeccc---CcchhhhhhHHhhhhhhhchhhHHHHHHhcCCC
Q psy5279         589 WSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY---SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPS  665 (1310)
Q Consensus       589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  665 (1310)
                      +........|.+...|.+|.||.|.+|..+. ++..||.|.+..   +.+....+..|...|+.|+|++|..+++.+...
T Consensus        19 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   97 (290)
T 1t4h_A           19 VGMSNDGRFLKFDIEIGRGSFKTVYKGLDTE-TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST   97 (290)
T ss_dssp             CEECTTSCEEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE
T ss_pred             hhcccCceeEEeeeeccCCCCeEEEEeEecC-CceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc
Confidence            4445566779999999999999999986654 788899998864   445567788999999999999999999988765


Q ss_pred             CcccchhhHHHHhhcCchhhhhhh
Q psy5279         666 TTASNIAVLVMEKLQGADVLSYLS  689 (1310)
Q Consensus       666 ~~~~~~~~~~~~~~~~~~~~~~~~  689 (1310)
                      ....+..++|||++.|.++..++.
T Consensus        98 ~~~~~~~~lv~e~~~~~~L~~~l~  121 (290)
T 1t4h_A           98 VKGKKCIVLVTELMTSGTLKTYLK  121 (290)
T ss_dssp             SSSCEEEEEEEECCCSCBHHHHHH
T ss_pred             cCCCceEEEEEEecCCCCHHHHHH
Confidence            555677899999999988766653

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.97  E-value=1.5e-32  Score=304.78  Aligned_cols=156  Identities=21%  Similarity=0.331  Sum_probs=126.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++........ ......||+.|+|||++.+..++.
T Consensus       119 ~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  195 (297)
T 3fxz_A          119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGP  195 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TCCEEECCCTTCEECCSTTC-CBCCCCSCGGGCCHHHHHCSCBCT
T ss_pred             HHHHHHHHHHHHHHHhCCceeCCCCHHHEEECC--CCCEEEeeCCCceecCCccc-ccCCccCCcCccChhhhcCCCCCc
Confidence            345679999999999999999999999999975  45799999999876654322 223346789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      ++|||||||++|+|++|..||.+.+.......+.............+++.+++||.+|+. ++.+|+++.++++|+|+..
T Consensus       196 ~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~  275 (297)
T 3fxz_A          196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKI  275 (297)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcc
Confidence            999999999999999999999988776655444332222222345789999999999886 5678999999999999874

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.97  E-value=5.1e-33  Score=314.80  Aligned_cols=104  Identities=23%  Similarity=0.410  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHHHHHHC-CceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~-gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++ ||+||||||+|||++.  +..+||+|||++......   ......|++.|+|||++.+..++
T Consensus       134 ~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~  208 (360)
T 3eqc_A          134 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYS  208 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECT--TCCEEECCCCCCHHHHHH---C----CCCCTTCCHHHHTTCCCS
T ss_pred             HHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECC--CCCEEEEECCCCcccccc---cccCCCCCCCeECHHHHcCCCCC
Confidence            34567999999999996 9999999999999985  456999999998654321   11223578999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      .++|||||||++|+|++|..||.+.+..+.
T Consensus       209 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~  238 (360)
T 3eqc_A          209 VQSDIWSMGLSLVEMAVGRYPIPPPDAKEL  238 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCCSSCCCHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            999999999999999999999998766554

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.97  E-value=5.9e-32  Score=315.49  Aligned_cols=274  Identities=22%  Similarity=0.318  Sum_probs=190.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--------chHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--------QYKSLFKNELDIMNQLCHRNLVRLHDSYET  251 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--------~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~  251 (1310)
                      .+.++|.+.+.||+|+||.||+|.++.+++.||||++.+...        .....+.+|+.+|++|+|||||+++++|..
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~  211 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA  211 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence            467899999999999999999999999999999999975321        112247899999999999999999999864


Q ss_pred             CCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccce
Q psy5279         252 KDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSR  330 (1310)
Q Consensus       252 ~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr  330 (1310)
                       +.+|+|||||+||+|.+.+.....+++.+++.++.||+.||+|||++||+||||||+|||++.++ ...+||+|||+|+
T Consensus       212 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~  290 (419)
T 3i6u_A          212 -EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  290 (419)
T ss_dssp             -SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred             -CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence             55899999999999999998888899999999999999999999999999999999999997543 3469999999999


Q ss_pred             eecCCCCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCCccCCC
Q psy5279         331 RITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNSCYTHP  408 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~cl~hp  408 (1310)
                      .........+.++|+.|     .+|++..+...              ..++...| | .|..+...++.+.|..+.-...
T Consensus       291 ~~~~~~~~~~~~gt~~y-----~aPE~~~~~~~--------------~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~  351 (419)
T 3i6u_A          291 ILGETSLMRTLCGTPTY-----LAPEVLVSVGT--------------AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV  351 (419)
T ss_dssp             SCC-----------CTT-----CCTTTTC------------------CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC
T ss_pred             ecCCCccccccCCCCCc-----cCceeeecCCC--------------CCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH
Confidence            87765555666666554     45665422110              11334466 4 6677777777776654321111


Q ss_pred             cceecCCCCCCCCCCCCcceecccccccccccccccCCCCCCCcccc-cCCCCCCCCchhhHHHHhccCCCHHHHHHHHH
Q psy5279         409 SRMIYPPGTQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWE-DNVPNRGPGGELLHSLTRQSYYTEYDIAHYIR  487 (1310)
Q Consensus       409 w~~~~~~~~~~tp~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~~~-d~v~e~~~~~el~~~~~~~~~~~e~~~~~~~~  487 (1310)
                      .+.              ..+ .........+....++....+++... ..+|+.++.   ..-+.++..|.+.+.+..+.
T Consensus       352 ~~~--------------~~i-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps---~~e~l~hp~~~~~~~~~~~~  413 (419)
T 3i6u_A          352 SLK--------------DQI-TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT---TEEALRHPWLQDEDMKRKFQ  413 (419)
T ss_dssp             CHH--------------HHH-HTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC---HHHHHHSGGGCCHHHHHHHH
T ss_pred             HHH--------------HHH-hcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcC---HHHHhCCcccCChhHHHHHH
Confidence            100              000 00000000000012222233444444 778888887   45678889999999999998


Q ss_pred             HHHH
Q psy5279         488 QLLS  491 (1310)
Q Consensus       488 qi~~  491 (1310)
                      ++++
T Consensus       414 ~ll~  417 (419)
T 3i6u_A          414 DLLS  417 (419)
T ss_dssp             HHHH
T ss_pred             HHhh
Confidence            8874

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.97  E-value=4.5e-31  Score=292.85  Aligned_cols=231  Identities=24%  Similarity=0.372  Sum_probs=179.0

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ...++|++.+.||+|+||.||+|.+..+|+.||+|++........+.+.+|+.+|+.++|||||+++++|...+.+|+||
T Consensus        17 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   96 (297)
T 3fxz_A           17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (297)
T ss_dssp             CGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence            45678999999999999999999999999999999997655555677889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l  338 (1310)
                      |||+||+|.+.+... .+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+.... ..
T Consensus        97 e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~  173 (297)
T 3fxz_A           97 EYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKR  173 (297)
T ss_dssp             ECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEECCCTTCEECCSTTCCB
T ss_pred             ECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCC--CEEEeeCCCceecCCccccc
Confidence            999999999988764 699999999999999999999999999999999999998665  79999999998876543 23


Q ss_pred             CCcccchHHHhhh-------------------------cCCCccccCCCCC-----CCCCCCcchhhhhhhcccchhhch
Q psy5279         339 NPLEYDVRYVRQA-------------------------LRHPWLNFADRKP-----TEDTPKLNTDALRNYYNLYKDWYG  388 (1310)
Q Consensus       339 ~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~-----~~~~p~~~~~~~~~~~~~~~D~~~  388 (1310)
                      ...++|+.|+++.                         +..||........     ....+..  .....+...+.|++.
T Consensus       174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~  251 (297)
T 3fxz_A          174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDFLN  251 (297)
T ss_dssp             CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCC--SCGGGSCHHHHHHHH
T ss_pred             CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--CCccccCHHHHHHHH
Confidence            4456666655432                         2223321100000     0000000  000122333466666


Q ss_pred             hhhhhhcccCCCCCCccCCCcceecCC
Q psy5279         389 NAAVRRYYRRRPLNSCYTHPSRMIYPP  415 (1310)
Q Consensus       389 ~~~l~~~~~r~~~~~cl~hpw~~~~~~  415 (1310)
                      ..+..+...|+++.+++.|||.....+
T Consensus       252 ~~l~~dp~~Rps~~ell~h~~~~~~~~  278 (297)
T 3fxz_A          252 RCLEMDVEKRGSAKELLQHQFLKIAKP  278 (297)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHccCChhHCcCHHHHhhChhhcccCc
Confidence            677777899999999999999865544

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.97  E-value=5.8e-33  Score=321.08  Aligned_cols=167  Identities=19%  Similarity=0.335  Sum_probs=119.2

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.||+.||.|||++||+||||||+|||++.   ..+||+|||+++....... .......||+.|+|||++.+.....
T Consensus       159 ~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~---~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  235 (390)
T 2zmd_A          159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSR  235 (390)
T ss_dssp             HHHHHHHHHHHHHHTTTCCCCCCCGGGEEESS---SCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC----
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCCHHHEEEEC---CeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccc
Confidence            35679999999999999999999999999953   5699999999976543221 1123346789999999875421100


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCccccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVK 1108 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~ 1108 (1310)
                                          .                                                           
T Consensus       236 --------------------~-----------------------------------------------------------  236 (390)
T 2zmd_A          236 --------------------E-----------------------------------------------------------  236 (390)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------c-----------------------------------------------------------
Confidence                                0                                                           


Q ss_pred             ccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChh-hhhhc
Q psy5279        1109 DLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQN 1187 (1310)
Q Consensus      1109 ~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~-e~~~~ 1187 (1310)
                                                           .-.....|+.++||||+|||+|+|++|.+||.+.... ..+..
T Consensus       237 -------------------------------------~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~  279 (390)
T 2zmd_A          237 -------------------------------------NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA  279 (390)
T ss_dssp             --------------------------------------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH
T ss_pred             -------------------------------------ccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHH
Confidence                                                 0000124778899999999999999999999876443 34444


Q ss_pred             ccccccccccchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCCc
Q psy5279        1188 VNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPS 1236 (1310)
Q Consensus      1188 I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~~ 1236 (1310)
                      +......++ +....++++++||.+||..||.+|||+.|+|+||||...
T Consensus       280 ~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          280 IIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             HHCTTSCCC-CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HhCccccCC-CCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence            444333322 224568999999999999999999999999999999643

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.97  E-value=5.3e-33  Score=310.01  Aligned_cols=100  Identities=30%  Similarity=0.554  Sum_probs=77.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEEEeeccceeeccCCcccccCCCCCCccccccccc---CCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA---EEP 1025 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~---~~~ 1025 (1310)
                      .++.||+.||.|||++||+||||||+|||++..+ ...+||+|||+++........  ....|++.|+|||++.   ...
T Consensus       118 ~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~  195 (322)
T 2ycf_A          118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM--RTLCGTPTYLAPEVLVSVGTAG  195 (322)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHH--HHHHSCCTTCCHHHHHHTTTTT
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccccccc--ccccCCcCccCchhhccCCCCC
Confidence            3467999999999999999999999999997643 346999999999765432211  1223678999999874   456


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ++.++|||||||++|+|++|..||.+
T Consensus       196 ~~~~~Di~slG~il~~l~~g~~pf~~  221 (322)
T 2ycf_A          196 YNRAVDCWSLGVILFICLSGYPPFSE  221 (322)
T ss_dssp             CTTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCcc
Confidence            77788888888888888888888753

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.97  E-value=8.4e-33  Score=300.67  Aligned_cols=101  Identities=25%  Similarity=0.518  Sum_probs=65.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++........ ......|++.|+|||++.+..++.
T Consensus       115 ~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~--~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  191 (278)
T 3cok_A          115 RHFMHQIITGMLYLHSHGILHRDLTLSNLLLTR--NMNIKIADFGLATQLKMPHE-KHYTLCGTPNYISPEIATRSAHGL  191 (278)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSSCCGGGEEECT--TCCEEECCCTTCEECC-----------------------------
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCCEEEEeecceeeccCCCC-cceeccCCCCcCCcchhcCCCCCc
Confidence            345679999999999999999999999999975  45799999999876542221 112235779999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|||||||++|+|++|..||.+.
T Consensus       192 ~~Di~slG~il~~l~~g~~p~~~~  215 (278)
T 3cok_A          192 ESDVWSLGCMFYTLLIGRPPFDTD  215 (278)
T ss_dssp             CTHHHHHHHHHHHHHHSSCSSCCC
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCh
Confidence            999999999999999999999654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.97  E-value=8.6e-33  Score=309.89  Aligned_cols=108  Identities=24%  Similarity=0.450  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.....+.. .....|++.|+|||++.+. .++
T Consensus       127 ~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~  203 (331)
T 4aaa_A          127 QKYLFQIINGIGFCHSHNIIHRDIKPENILVSQ--SGVVKLCDFGFARTLAAPGEV-YDDEVATRWYRAPELLVGDVKYG  203 (331)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TSCEEECCCTTC-------------CCCCCTTCCHHHHTTCTTCC
T ss_pred             HHHHHHHHHHHHHHHHCCEEccCcChheEEEcC--CCcEEEEeCCCceeecCCccc-cCCCcCCccccCcccccCCCCcc
Confidence            445779999999999999999999999999975  457999999998765432221 2234578999999999876 688


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      .++|||||||++|+|++|..||.+.+..+...
T Consensus       204 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  235 (331)
T 4aaa_A          204 KAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY  235 (331)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Confidence            99999999999999999999999877655433

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.97  E-value=7.8e-33  Score=312.60  Aligned_cols=166  Identities=19%  Similarity=0.329  Sum_probs=115.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.||+.||.|||++||+||||||+|||++   +..+||+|||+++........ ......||+.|+|||++.+.....
T Consensus       112 ~i~~qi~~al~~lH~~~iiHrDikp~NIll~---~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  188 (343)
T 3dbq_A          112 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR  188 (343)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE---TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC---
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCcceEEEE---CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccc
Confidence            3467999999999999999999999999997   356999999999765432221 122345789999999875321000


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCccccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVK 1108 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~ 1108 (1310)
                      .                                                                               
T Consensus       189 ~-------------------------------------------------------------------------------  189 (343)
T 3dbq_A          189 E-------------------------------------------------------------------------------  189 (343)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             c-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             ccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChh-hhhhc
Q psy5279        1109 DLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQN 1187 (1310)
Q Consensus      1109 ~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~-e~~~~ 1187 (1310)
                                                           .......|+.++||||+||++|+|++|.+||.+.... ..+..
T Consensus       190 -------------------------------------~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~  232 (343)
T 3dbq_A          190 -------------------------------------NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA  232 (343)
T ss_dssp             --------------------------------------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH
T ss_pred             -------------------------------------ccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHH
Confidence                                                 0001124677899999999999999999999765432 22333


Q ss_pred             ccccccccccchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCC
Q psy5279        1188 VNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235 (1310)
Q Consensus      1188 I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~ 1235 (1310)
                      +....... .+....++++++||.+||..||.+|||+.|+|+||||..
T Consensus       233 ~~~~~~~~-~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~  279 (343)
T 3dbq_A          233 IIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  279 (343)
T ss_dssp             HHCTTSCC-CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             HhcCCccc-CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence            32222211 123456889999999999999999999999999999964

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.97  E-value=7.9e-32  Score=306.72  Aligned_cols=195  Identities=26%  Similarity=0.431  Sum_probs=163.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|++.+.||+|+||+||+|.++.+|+.||||++.+..   ......+.+|+.+|+.++||||++++++|.+.+.+|+||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            67999999999999999999999999999999997531   223456789999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l  338 (1310)
                      ||++||+|...+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  ++||+|||+|+.... ....
T Consensus        85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g--~vkL~DFG~a~~~~~~~~~~  162 (337)
T 1o6l_A           85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATM  162 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--CEEECCCTTCBCSCCTTCCB
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCC--CEEEeeccchhhcccCCCcc
Confidence            9999999999998888899999999999999999999999999999999999998665  899999999987433 3345


Q ss_pred             CCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhh--chhhhhhhcccCCCC
Q psy5279         339 NPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDW--YGNAAVRRYYRRRPL  401 (1310)
Q Consensus       339 ~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~--~~~~~l~~~~~r~~~  401 (1310)
                      .+.+||+.|+     +|++..+.                 .++...||  .|..+...++.+.|.
T Consensus       163 ~~~~gt~~y~-----aPE~~~~~-----------------~~~~~~DiwslG~il~ell~g~~Pf  205 (337)
T 1o6l_A          163 KTFCGTPEYL-----APEVLEDN-----------------DYGRAVDWWGLGVVMYEMMCGRLPF  205 (337)
T ss_dssp             CCCEECGGGC-----CGGGGSSS-----------------CBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccccChhhC-----ChhhhcCC-----------------CCCchhhcccchhHHHHHhcCCCCC
Confidence            6678887765     46654211                 13445775  456666666666554

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.97  E-value=1.4e-31  Score=316.20  Aligned_cols=232  Identities=25%  Similarity=0.372  Sum_probs=178.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .+.++|++.+.||+|+||+||+|.++.+|+.||+|++.....  ...+.+.+|+.+|+.|+|||||+++++|.+++.+|+
T Consensus         8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   87 (444)
T 3soa_A            8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL   87 (444)
T ss_dssp             HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred             cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence            577889999999999999999999999999999999976543  334568899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC-CCCeEEEEeeccceeecCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP-GGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~-~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |||||.||+|++.+...+.+++.++..++.||+.||.|||++||+||||||+|||++.+ .+..+||+|||+|+......
T Consensus        88 v~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~  167 (444)
T 3soa_A           88 IFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ  167 (444)
T ss_dssp             EECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred             EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence            99999999999999988889999999999999999999999999999999999999854 23579999999998776543


Q ss_pred             -CCCCcccchHHHhhh-------------------------cCCCccccCCCCC----CCCCCCcchhhhhhhcccchhh
Q psy5279         337 -KLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKP----TEDTPKLNTDALRNYYNLYKDW  386 (1310)
Q Consensus       337 -~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~~D~  386 (1310)
                       .....+||+.|+++.                         +..||........    ......+....+..+...++|.
T Consensus       168 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  247 (444)
T 3soa_A          168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL  247 (444)
T ss_dssp             CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHH
T ss_pred             ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHH
Confidence             334567777766542                         2223211100000    0000000011112233445666


Q ss_pred             chhhhhhhcccCCCCCCccCCCcce
Q psy5279         387 YGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       387 ~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +...+..+...|+++.+++.|||+.
T Consensus       248 i~~~L~~dP~~Rpta~e~L~hp~~~  272 (444)
T 3soa_A          248 INKMLTINPSKRITAAEALKHPWIS  272 (444)
T ss_dssp             HHHHSCSSTTTSCCHHHHHHSCTTH
T ss_pred             HHHHcCCChhHCCCHHHHhcCcccc
Confidence            6666777789999999999999974

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.97  E-value=9.4e-33  Score=300.95  Aligned_cols=101  Identities=25%  Similarity=0.482  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++.......   .....|++.|+|||++.+..++.+
T Consensus       113 ~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~--~~~~~l~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~  187 (279)
T 3fdn_A          113 TYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRMHDEK  187 (279)
T ss_dssp             HHHHHHHHHHHHHHTTTCEECCCCGGGEEECT--TSCEEECSCCEESCC-----------CCCCTTCCHHHHTTCCCCTT
T ss_pred             HHHHHHHHHHHHHHhCCEecccCChHhEEEcC--CCCEEEEeccccccCCccc---ccccCCCCCccCHhHhccCCCCcc
Confidence            34679999999999999999999999999975  4579999999885543221   123457899999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCChh
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSEP 1055 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~~ 1055 (1310)
                      +|||||||++|+|++|..||.+.+..
T Consensus       188 ~Di~slG~il~~l~~g~~p~~~~~~~  213 (279)
T 3fdn_A          188 VDLWSLGVLCYEFLVGKPPFEANTYQ  213 (279)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             chhHhHHHHHHHHHHCCCCCCCCcHH
Confidence            99999999999999999999765443

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.97  E-value=1.4e-32  Score=309.46  Aligned_cols=102  Identities=30%  Similarity=0.556  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++......+. ......|++.|+|||++.+..++.
T Consensus       144 ~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  220 (335)
T 2owb_A          144 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGE-RKKVLCGTPNYIAPEVLSKKGHSF  220 (335)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT--TCCEEECCCTTCEECCSTTC-CBCCCCSCCSSCCHHHHHTSCBCT
T ss_pred             HHHHHHHHHHHHHHHHCCCEecCCCchhEEEcC--CCCEEEeeccCceecccCcc-cccccCCCccccCHHHhccCCCCc
Confidence            345679999999999999999999999999985  45799999999976643222 223345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|||||||++|+|++|..||.+.+
T Consensus       221 ~~Di~slG~il~~l~~g~~pf~~~~  245 (335)
T 2owb_A          221 EVDVWSIGCIMYTLLVGKPPFETSC  245 (335)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             hhhHHHHHHHHHHHHHCcCCCCCCC
Confidence            9999999999999999999997654

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.97  E-value=1.6e-32  Score=313.22  Aligned_cols=97  Identities=20%  Similarity=0.270  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC--CCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE--EPIF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~--~~ys 1027 (1310)
                      +++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++......  .  ...+++.|+|||++.+  ..|+
T Consensus       198 ~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~--~~~~kL~DFG~a~~~~~~~--~--~~~~t~~y~aPE~~~~~~~~~~  271 (371)
T 3q60_A          198 ILTAQLIRLAANLQSKGLVHGHFTPDNLFIMP--DGRLMLGDVSALWKVGTRG--P--ASSVPVTYAPREFLNASTATFT  271 (371)
T ss_dssp             HHHHHHHHHHHHHHHTTEEETTCSGGGEEECT--TSCEEECCGGGEEETTCEE--E--GGGSCGGGCCHHHHTCSEEECC
T ss_pred             HHHHHHHHHHHHHHHCCCccCcCCHHHEEECC--CCCEEEEecceeeecCCCc--c--CccCCcCCcChhhccCCCCCcC
Confidence            45589999999999999999999999999985  4579999999998653211  1  1234589999999987  6799


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|||||||++|+|++|..||.+.
T Consensus       272 ~~~DiwSlG~il~elltg~~Pf~~~  296 (371)
T 3q60_A          272 HALNAWQLGLSIYRVWCLFLPFGLV  296 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred             ccccHHHHHHHHHHHHhCCCCCCCc
Confidence            9999999999999999999999765

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.97  E-value=2.2e-31  Score=303.16  Aligned_cols=229  Identities=20%  Similarity=0.238  Sum_probs=176.2

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ..++|.+.+.||+|+||+||+|.+..+|+.||+|++....   ......+.+|+.+|+.++|||||++++++.+++.+|+
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l   86 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM   86 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            4578999999999999999999999999999999997432   1234568899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      ||||+ +|+|++.+...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.......
T Consensus        87 v~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~--~~kl~DFG~s~~~~~~~~  163 (336)
T 3h4j_B           87 VIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNL--NVKIADFGLSNIMTDGNF  163 (336)
T ss_dssp             EECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTC--CEEECCSSCTBTTTTSBT
T ss_pred             EEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCC--CEEEEEeccceeccCCcc
Confidence            99999 789999998888899999999999999999999999999999999999998655  799999999998766666


Q ss_pred             CCCcccchHHHhhh--------------------------cCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhh
Q psy5279         338 LNPLEYDVRYVRQA--------------------------LRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAA  391 (1310)
Q Consensus       338 l~~~~~t~~yv~~~--------------------------~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~  391 (1310)
                      ..+.+||+.|+++.                          ++.||-..................-..+...+.|.+...+
T Consensus       164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L  243 (336)
T 3h4j_B          164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMI  243 (336)
T ss_dssp             TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHHHHTTS
T ss_pred             cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHHHHHHc
Confidence            66667776655432                          2223321110000000000000000011233456666666


Q ss_pred             hhhcccCCCCCCccCCCccee
Q psy5279         392 VRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       392 l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      ..+..+|+|+.+++.|||...
T Consensus       244 ~~dP~~Rpt~~eil~hp~~~~  264 (336)
T 3h4j_B          244 VADPMQRITIQEIRRDPWFNV  264 (336)
T ss_dssp             CSSGGGSCCHHHHTTCHHHHT
T ss_pred             CCChhHCcCHHHHHhChhhcc
Confidence            777899999999999999753

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.97  E-value=9.1e-32  Score=308.02  Aligned_cols=168  Identities=24%  Similarity=0.363  Sum_probs=142.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~ly  256 (1310)
                      -.++|++.+.||+|+||+||+|.++.+|+.||||++.+..   ......+.+|+.+|+.+ +|||||+++++|.+.+.+|
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  100 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF  100 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence            3478999999999999999999999999999999997532   22345677899999998 7999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-C
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-F  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~  335 (1310)
                      ||||||+||+|...+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  ++||+|||+|+.... .
T Consensus       101 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g--~ikL~DFG~a~~~~~~~  178 (353)
T 3txo_A          101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG--HCKLADFGMCKEGICNG  178 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--CEEECCCTTCBCSCC--
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCC--CEEEccccceeecccCC
Confidence            9999999999999998888899999999999999999999999999999999999998765  899999999986433 2


Q ss_pred             CCCCCcccchHHHhh
Q psy5279         336 GKLNPLEYDVRYVRQ  350 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~  350 (1310)
                      ....+.|||+.|+++
T Consensus       179 ~~~~~~~gt~~y~aP  193 (353)
T 3txo_A          179 VTTATFCGTPDYIAP  193 (353)
T ss_dssp             -------CCGGGCCH
T ss_pred             ccccccCCCcCeECh
Confidence            344567888777653

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.97  E-value=1.1e-30  Score=286.81  Aligned_cols=165  Identities=24%  Similarity=0.343  Sum_probs=139.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|++.+.||+|+||+||+|.++.+|+.||+|++.....  .....+.+|+.+|++++|||||++++++.+++.+|+|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            579999999999999999999999999999999975432  334668899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CCC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KLN  339 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l~  339 (1310)
                      ||.|+.+.......+.+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+...... ...
T Consensus        82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~~  159 (292)
T 3o0g_A           82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG--ELKLANFGLARAFGIPVRCYS  159 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEEECCCTTCEECCSCCSCCC
T ss_pred             cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CEEEeecccceecCCcccccc
Confidence            998754444444456799999999999999999999999999999999999998665  79999999999775332 233


Q ss_pred             CcccchHHHh
Q psy5279         340 PLEYDVRYVR  349 (1310)
Q Consensus       340 ~~~~t~~yv~  349 (1310)
                      ..++|+.|.+
T Consensus       160 ~~~~t~~y~a  169 (292)
T 3o0g_A          160 AEVVTLWYRP  169 (292)
T ss_dssp             SCCSCGGGCC
T ss_pred             CCccccCCcC
Confidence            3455555544

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.97  E-value=1.8e-32  Score=299.57  Aligned_cols=100  Identities=28%  Similarity=0.528  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++.......   .....|++.|+|||++.+..++.+
T Consensus       118 ~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~  192 (284)
T 2vgo_A          118 TFMEELADALHYCHERKVIHRDIKPENLLMGY--KGELKIADFGWSVHAPSLR---RRTMCGTLDYLPPEMIEGKTHDEK  192 (284)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCSGGGEEECT--TCCEEECCCTTCEECSSSC---BCCCCSCGGGCCHHHHTTCCBCTT
T ss_pred             HHHHHHHHHHHHHHHCCceecCCCHHHEEEcC--CCCEEEecccccccCcccc---cccccCCCCcCCHHHhccCCCCcc
Confidence            34679999999999999999999999999975  4579999999986553321   223457899999999999999999


Q ss_pred             cchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1030 TDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1030 sDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      +|+|||||++|+|++|..||.+.+.
T Consensus       193 ~Di~slG~il~~l~~g~~pf~~~~~  217 (284)
T 2vgo_A          193 VDLWCAGVLCYEFLVGMPPFDSPSH  217 (284)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             cchhhHHHHHHHHHHCCCCCCCCCH
Confidence            9999999999999999999976543

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.97  E-value=2.1e-32  Score=300.40  Aligned_cols=102  Identities=30%  Similarity=0.557  Sum_probs=86.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++......+.. .....|++.|+|||++.+..++.
T Consensus       118 ~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~  194 (294)
T 2rku_A          118 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPEVLSKKGHSF  194 (294)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--TCCEEECCCTTCEECCSTTCC-BCCCCSCCSSCCHHHHTTSCBCT
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCChHhEEEcC--CCCEEEEeccCceecccCccc-cccccCCCCcCCcchhccCCCCc
Confidence            345679999999999999999999999999985  457999999999765432221 23345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|+|||||++|+|++|..||.+.+
T Consensus       195 ~~Di~slG~~l~~l~~g~~p~~~~~  219 (294)
T 2rku_A          195 EVDVWSIGCIMYTLLVGKPPFETSC  219 (294)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999997654

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.97  E-value=1.8e-32  Score=319.86  Aligned_cols=107  Identities=26%  Similarity=0.449  Sum_probs=88.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      +..++.||+.||.|||++||+||||||+|||++.+ ...+||+|||+++........  ....||+.|+|||++.+. .|
T Consensus       158 ~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~-~~~~kl~DFG~a~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~  234 (420)
T 1j1b_A          158 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELIFGATDY  234 (420)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECCTTCCC--CSCCSCTTSCCHHHHTTCSSC
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCC-CCeEEeccchhhhhcccCCCc--eeeeeCCCcCCHHHHcCCCCC
Confidence            45567899999999999999999999999999852 346899999999875433222  223568999999999765 78


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      +.++|||||||++|+|++|.+||.+.+..+.
T Consensus       235 ~~~~DiwSlG~il~ell~G~~pf~~~~~~~~  265 (420)
T 1j1b_A          235 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ  265 (420)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             CchhhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            9999999999999999999999998775544

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=1.3e-32  Score=309.91  Aligned_cols=109  Identities=21%  Similarity=0.394  Sum_probs=89.7

Q ss_pred             HHHHHHHHHHHHHHHH--HCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC
Q psy5279         948 DAYCVTSVLDGLQYLH--WRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLH--s~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ...++.||+.||.|||  ++||+||||||+|||++. .+..+||+|||+++........  ....||+.|+|||++.+..
T Consensus       131 ~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~-~~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~  207 (360)
T 3e3p_A          131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE-ADGTLKLCDFGSAKKLSPSEPN--VAYICSRYYRAPELIFGNQ  207 (360)
T ss_dssp             HHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEET-TTTEEEECCCTTCBCCCTTSCC--CSTTSCGGGCCHHHHTTCS
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeC-CCCcEEEeeCCCceecCCCCCc--ccccCCcceeCHHHHcCCC
Confidence            3456789999999999  999999999999999974 2457999999999766533322  2335689999999997654


Q ss_pred             -CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1026 -IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1026 -ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                       ++.++|||||||++|+|++|..||.+.+......
T Consensus       208 ~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~  242 (360)
T 3e3p_A          208 HYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLH  242 (360)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHH
Confidence             8999999999999999999999999877655543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.97  E-value=3.3e-32  Score=300.10  Aligned_cols=102  Identities=29%  Similarity=0.480  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++....... .......|++.|+|||++.+..++.
T Consensus       122 ~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~  198 (303)
T 3a7i_A          122 ATILREILKGLDYLHSEKKIHRDIKAANVLLSE--HGEVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIKQSAYDS  198 (303)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TSCEEECCCTTCEECBTTB-CCBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHHCCCccCCCChheEEECC--CCCEEEeecccceecCccc-cccCccCCCcCccCHHHHhcCCCCc
Confidence            345679999999999999999999999999975  4579999999997654322 1223345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++|||||||++|+|++|..||....
T Consensus       199 ~~Di~slG~il~~l~~g~~p~~~~~  223 (303)
T 3a7i_A          199 KADIWSLGITAIELARGEPPHSELH  223 (303)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             hhhhHHHHHHHHHHccCCCCCCCcC
Confidence            9999999999999999999997543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.97  E-value=1.6e-32  Score=302.24  Aligned_cols=110  Identities=22%  Similarity=0.378  Sum_probs=86.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccC-CC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAE-EP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~-~~ 1025 (1310)
                      ..++.||+.||+|||++||+||||||+|||++. .+..+||+|||+++.......  .......+++.|+|||++.+ ..
T Consensus       123 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  201 (320)
T 2i6l_A          123 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINT-EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNN  201 (320)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET-TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTC
T ss_pred             HHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC-CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCccc
Confidence            345679999999999999999999999999974 245799999999876532111  11122345789999999876 67


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      ++.++|||||||++|+|++|..||.+.+..+...
T Consensus       202 ~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  235 (320)
T 2i6l_A          202 YTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ  235 (320)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             CCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            8899999999999999999999999877655443

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.97  E-value=6.9e-32  Score=305.19  Aligned_cols=104  Identities=25%  Similarity=0.493  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++.....    .....+++.|+|||++.+ ..+
T Consensus       128 ~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~--~~~~kl~Dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~  201 (353)
T 3coi_A          128 IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE--DCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHY  201 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECT--TCCEEECSTTCTTC------------CCSBCCSCHHHHSCCSCC
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECC--CCcEEEeecccccCCCCC----ccccccCcCcCCHHHHhCcCCC
Confidence            3456779999999999999999999999999985  457999999998754321    122356799999999987 678


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      +.++|||||||++|+|++|..||.+.+..+.
T Consensus       202 ~~~~Di~slG~il~el~~g~~pf~~~~~~~~  232 (353)
T 3coi_A          202 NQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ  232 (353)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            8999999999999999999999998765544

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.97  E-value=9.1e-32  Score=302.31  Aligned_cols=106  Identities=22%  Similarity=0.347  Sum_probs=85.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc---------cccCCCCCCcccccc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---------IHPINTPNPEFAAPE 1019 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~---------~~~~~tGtp~Y~APE 1019 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++.........         ......||+.|+|||
T Consensus       115 ~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  192 (353)
T 2b9h_A          115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS--NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE  192 (353)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT--TCCEEECCCTTCEECC----------------CCCCCCGGGCCHH
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcC--CCcEEEEecccccccccccccccCccccccchhhccccccccCCe
Confidence            445779999999999999999999999999975  457999999998765422111         112235789999999


Q ss_pred             cccC-CCCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1020 VLAE-EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1020 vl~~-~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ++.+ ..++.++|||||||++|+|++|..||.+.+..+
T Consensus       193 ~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  230 (353)
T 2b9h_A          193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH  230 (353)
T ss_dssp             HHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             eeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence            8865 678899999999999999999999999876543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.97  E-value=1.2e-30  Score=293.60  Aligned_cols=230  Identities=23%  Similarity=0.305  Sum_probs=173.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ++.++|++.+.||+|+||+||+|.++.+++.||||++..... ...+.+.+|+.+|+.++|||||++++++.+.+..|+|
T Consensus         4 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv   83 (323)
T 3tki_A            4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   83 (323)
T ss_dssp             TTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            577899999999999999999999999999999999975432 2345688999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC--
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG--  336 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~--  336 (1310)
                      ||||+||+|.+.+.....+++.++..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+....  
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~  161 (323)
T 3tki_A           84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRE  161 (323)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC--CEEECCCTTCEECEETTEE
T ss_pred             EEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCC--CEEEEEeeccceeccCCcc
Confidence            99999999999998777899999999999999999999999999999999999998655  79999999998764322  


Q ss_pred             -CCCCcccchHHHhhh--------------------------cCCCccccCCCCCCC---CCCCcchhhhhhhcccchhh
Q psy5279         337 -KLNPLEYDVRYVRQA--------------------------LRHPWLNFADRKPTE---DTPKLNTDALRNYYNLYKDW  386 (1310)
Q Consensus       337 -~l~~~~~t~~yv~~~--------------------------~r~P~l~~~~~~~~~---~~p~~~~~~~~~~~~~~~D~  386 (1310)
                       .....++|+.|+++.                          ++.||-.........   ............+...+.+.
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  241 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL  241 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred             cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHH
Confidence             233456666554432                          223332111100000   00000000111223333555


Q ss_pred             chhhhhhhcccCCCCCCccCCCcce
Q psy5279         387 YGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       387 ~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +...+..+...|+++.+++.|||..
T Consensus       242 i~~~L~~dP~~R~t~~eil~h~~~~  266 (323)
T 3tki_A          242 LHKILVENPSARITIPDIKKDRWYN  266 (323)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTCTTTT
T ss_pred             HHHHccCChhhCcCHHHHhhChhhc
Confidence            6666667788999999999999974

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=8.9e-33  Score=314.71  Aligned_cols=100  Identities=30%  Similarity=0.383  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC--CCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE--PIF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~--~ys 1027 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++..............||+.|+|||++.+.  .++
T Consensus       163 ~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  240 (355)
T 1vzo_A          163 IYVGEIVLALEHLHKLGIIYRDIKLENILLDS--NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHD  240 (355)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---C
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCC
Confidence            34669999999999999999999999999975  45799999999976543222222233578999999999863  467


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      .++|||||||++|+|++|..||..
T Consensus       241 ~~~DvwslG~il~ell~g~~pf~~  264 (355)
T 1vzo_A          241 KAVDWWSLGVLMYELLTGASPFTV  264 (355)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTSC
T ss_pred             chhhHHHHHHHHHHHHHCCCCCcc
Confidence            888999999999999999988853

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.97  E-value=9.4e-33  Score=302.66  Aligned_cols=91  Identities=21%  Similarity=0.377  Sum_probs=75.9

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeecccC---cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS---HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      .+.|+++..|.+|.||.|.+|..+. ++..||.|++...   ......+..|+..|++|+|++|..+++.+...    +.
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~-~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~   95 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRI-TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS----SS   95 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS----SE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcC-CCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCC----Ce
Confidence            3579999999999999999987665 7889999998654   34567788999999999999999999988765    56


Q ss_pred             hhHHHHhhcCchhhhhhhc
Q psy5279         672 AVLVMEKLQGADVLSYLSS  690 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~~  690 (1310)
                      ..+|||++.|.+++.++..
T Consensus        96 ~~lv~e~~~~~~L~~~l~~  114 (287)
T 2wei_A           96 FYIVGELYTGGELFDEIIK  114 (287)
T ss_dssp             EEEEECCCCSCBHHHHHHH
T ss_pred             EEEEEEccCCCCHHHHHHh
Confidence            7899999999888766643

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.97  E-value=9.1e-31  Score=305.31  Aligned_cols=167  Identities=23%  Similarity=0.361  Sum_probs=147.5

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .++|++.+.||+|+||+||+|+++.+++.||+|++++...   .....+.+|..+|.++ +|||||+++++|.+++.+||
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            4679999999999999999999999999999999976422   2234577899999887 89999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee-cCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI-TSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i-~~~~  336 (1310)
                      |||||+||+|...+.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++  ++||+|||+|+.. ....
T Consensus       131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g--~ikL~DFGla~~~~~~~~  208 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGD  208 (396)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--CEEECCCTTCBCCCCTTC
T ss_pred             EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCC--CEEEeecceeeecccCCC
Confidence            999999999999998888899999999999999999999999999999999999998765  8999999999873 3344


Q ss_pred             CCCCcccchHHHhh
Q psy5279         337 KLNPLEYDVRYVRQ  350 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~  350 (1310)
                      ...+.|||+.|+++
T Consensus       209 ~~~~~~gt~~Y~aP  222 (396)
T 4dc2_A          209 TTSTFCGTPNYIAP  222 (396)
T ss_dssp             CBCCCCBCGGGCCH
T ss_pred             ccccccCCcccCCc
Confidence            56677888877654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=2.4e-32  Score=332.91  Aligned_cols=101  Identities=25%  Similarity=0.475  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      +..++.||+.||+|||++|||||||||+|||++.  ++.+||+|||+++.........  ...||+.|+|||++.+..|+
T Consensus       288 ~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~--~g~vKL~DFGla~~~~~~~~~~--~~~GT~~Y~APEvl~~~~~~  363 (576)
T 2acx_A          288 AVFYAAEICCGLEDLHRERIVYRDLKPENILLDD--HGHIRISDLGLAVHVPEGQTIK--GRVGTVGYMAPEVVKNERYT  363 (576)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--TSCEEECCCTTCEECCTTCCEE--CCCSCGGGCCHHHHTTCEES
T ss_pred             HHHHHHHHHHHHHHHHHCCEeccCCchheEEEeC--CCCeEEEecccceecccCcccc--ccCCCccccCHHHHcCCCCC
Confidence            4556789999999999999999999999999985  4679999999998765433222  23678999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|||||||++|+|++|.+||.+.
T Consensus       364 ~~~DiwSLGvilyeLltG~~PF~~~  388 (576)
T 2acx_A          364 FSPDWWALGCLLYEMIAGQSPFQQR  388 (576)
T ss_dssp             SHHHHHHHHHHHHHHHHSSCSSSCS
T ss_pred             ccchHHHHHHHHHHHHhCCCCCccc
Confidence            9999999999999999999999764

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.97  E-value=3.7e-32  Score=329.24  Aligned_cols=102  Identities=26%  Similarity=0.456  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      +..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++....... .....+||+.|+|||++.+..|+
T Consensus       291 ~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~--~g~vkL~DFGla~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~  367 (543)
T 3c4z_A          291 AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDD--DGNVRISDLGLAVELKAGQT-KTKGYAGTPGFMAPELLLGEEYD  367 (543)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--TSCEEECCCTTCEECCTTCC-CBCCCCSCTTTSCHHHHTTCCBC
T ss_pred             HHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeC--CCCEEEeecceeeeccCCCc-ccccccCCccccChhhhcCCCCC
Confidence            4567789999999999999999999999999985  56799999999987643322 22334688999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|||||||++|+|++|.+||.+.
T Consensus       368 ~~~DiwSlGvilyelltG~~PF~~~  392 (543)
T 3c4z_A          368 FSVDYFALGVTLYEMIAARGPFRAR  392 (543)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred             hHHhcCcchHHHHHHHhCCCCCCCC
Confidence            9999999999999999999999765

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.97  E-value=4.6e-32  Score=306.72  Aligned_cols=108  Identities=22%  Similarity=0.382  Sum_probs=82.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++........  ....+++.|+|||++.+ ..+
T Consensus       136 ~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~--~~~~kl~Dfg~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~  211 (362)
T 3pg1_A          136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD--NNDITICDFNLAREDTADANK--THYVTHRWYRAPELVMQFKGF  211 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TCCEEECCTTC-----------------CGGGCCHHHHTTCTTC
T ss_pred             HHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcC--CCCEEEEecCccccccccccc--ceecccceecCcHHhcCCCCC
Confidence            3456789999999999999999999999999975  456999999998754332222  22356789999999987 678


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      +.++|||||||++|+|++|..||.+.+..+...
T Consensus       212 ~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~  244 (362)
T 3pg1_A          212 TKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN  244 (362)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             CcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            899999999999999999999999877655443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.97  E-value=2.3e-31  Score=302.62  Aligned_cols=232  Identities=21%  Similarity=0.324  Sum_probs=176.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-----cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-----NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-----~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~  254 (1310)
                      .+.+.|++.+.||+|+||+||+|.++.+|+.||||++....     ....+.+.+|+.+|+.|+|||||+++++|.+.+.
T Consensus        21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~  100 (351)
T 3c0i_A           21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM  100 (351)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            46678999999999999999999999999999999996421     1245678999999999999999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhc----CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccc
Q psy5279         255 FTIISELAGGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLS  329 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~----~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLA  329 (1310)
                      +|||||||+||+|.+.+...    ..+++..+..++.||+.||.|||++||+||||||+|||++.++ ...+||+|||+|
T Consensus       101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence            99999999999998877542    2489999999999999999999999999999999999998654 245999999999


Q ss_pred             eeecCCCC-CCCcccchHHHhhh-------------------------cCCCccccCCCC---CCCCCCCcchhhhhhhc
Q psy5279         330 RRITSFGK-LNPLEYDVRYVRQA-------------------------LRHPWLNFADRK---PTEDTPKLNTDALRNYY  380 (1310)
Q Consensus       330 r~i~~~~~-l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~---~~~~~p~~~~~~~~~~~  380 (1310)
                      +....... ....++|+.|+++.                         +..||.......   ...............+.
T Consensus       181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~~~~~~~~~s  260 (351)
T 3c0i_A          181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHIS  260 (351)
T ss_dssp             EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCCCHHHHTTSC
T ss_pred             eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCCCccccccCC
Confidence            98765433 34456777665532                         122221100000   00000011112222334


Q ss_pred             ccchhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         381 NLYKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       381 ~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ..+.|++...+..+...|+++.+++.|||+.
T Consensus       261 ~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~  291 (351)
T 3c0i_A          261 ESAKDLVRRMLMLDPAERITVYEALNHPWLK  291 (351)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcChhhc
Confidence            4456666677777789999999999999974

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.97  E-value=3.7e-31  Score=302.38  Aligned_cols=228  Identities=18%  Similarity=0.258  Sum_probs=174.1

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~ly  256 (1310)
                      -.++|++.+.||+|+||+||+|.++.+|+.||||++++..   ......+.+|..+|+.+ +|||||+++++|.+.+.+|
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~   94 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF   94 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence            3478999999999999999999999999999999997532   22345577899999887 9999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-C
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-F  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~  335 (1310)
                      +|||||+||+|.+.+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  ++||+|||+|+.... .
T Consensus        95 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g--~vkL~DFG~a~~~~~~~  172 (345)
T 1xjd_A           95 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG--HIKIADFGMCKENMLGD  172 (345)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--CEEECCCTTCBCCCCTT
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCC--CEEEeEChhhhhcccCC
Confidence            9999999999999998878899999999999999999999999999999999999998665  899999999987533 3


Q ss_pred             CCCCCcccchHHHhhhcC--CCc------cccC-------CCCCCCCCCCcchhhhh-----------hhcccchhhchh
Q psy5279         336 GKLNPLEYDVRYVRQALR--HPW------LNFA-------DRKPTEDTPKLNTDALR-----------NYYNLYKDWYGN  389 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~~r--~P~------l~~~-------~~~~~~~~p~~~~~~~~-----------~~~~~~~D~~~~  389 (1310)
                      ....+.+||+.|+++...  .++      +.+|       ...+.+. .....+.+.           .+...+.|.+..
T Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~-~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  251 (345)
T 1xjd_A          173 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH-GQDEEELFHSIRMDNPFYPRWLEKEAKDLLVK  251 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC-CSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHH
T ss_pred             CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHhCCCCCCcccCHHHHHHHHH
Confidence            345667888877654211  100      0000       0011111 000011111           112234566666


Q ss_pred             hhhhhcccCCCCC-CccCCCcce
Q psy5279         390 AAVRRYYRRRPLN-SCYTHPSRM  411 (1310)
Q Consensus       390 ~~l~~~~~r~~~~-~cl~hpw~~  411 (1310)
                      .+..+..+|+++. +++.|||..
T Consensus       252 lL~~dp~~R~~~~~~i~~hp~f~  274 (345)
T 1xjd_A          252 LFVREPEKRLGVRGDIRQHPLFR  274 (345)
T ss_dssp             HSCSSGGGSBTTBSCGGGSGGGT
T ss_pred             HhcCCHhHcCCChHHHHcCcccc
Confidence            6667788999987 999999964

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.97  E-value=4.4e-32  Score=304.52  Aligned_cols=107  Identities=33%  Similarity=0.692  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++... ...+||+|||+++........  ....|++.|+|||++.+..+
T Consensus       133 ~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~  210 (327)
T 3lm5_A          133 VIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL--REIMGTPEYLAPEILNYDPI  210 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-----------CCCGGGCCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcccc--ccccCCcCccCCeeecCCCC
Confidence            345678999999999999999999999999997522 457999999999866433222  22357899999999999999


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      +.++|||||||++|+|++|..||.+.+..+
T Consensus       211 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~  240 (327)
T 3lm5_A          211 TTATDMWNIGIIAYMLLTHTSPFVGEDNQE  240 (327)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCchH
Confidence            999999999999999999999998765543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.97  E-value=5e-32  Score=300.65  Aligned_cols=105  Identities=27%  Similarity=0.422  Sum_probs=88.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++.......  ......|++.|+|||++.+..++.
T Consensus       123 ~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~--~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~  198 (326)
T 1blx_A          123 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYAT  198 (326)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TCCEEECSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCT
T ss_pred             HHHHHHHHHHHHHHHHCCceeccCCHHHeEEcC--CCCEEEecCcccccccCCC--CccccccccceeCHHHHhcCCCCc
Confidence            445779999999999999999999999999975  4579999999987654322  223345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ++|||||||++|+|++|..||.+.+..+.
T Consensus       199 ~~Di~slG~il~~l~~g~~pf~~~~~~~~  227 (326)
T 1blx_A          199 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQ  227 (326)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             chhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence            99999999999999999999998765443

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.97  E-value=6.7e-31  Score=300.57  Aligned_cols=231  Identities=21%  Similarity=0.262  Sum_probs=167.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ...++|++.+.||+|+||+||+|.++.+|+.||+|++.... ...+.+.+|+.+|+.|+|||||+++++|.+.+.+|+||
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~   95 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM   95 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence            34578999999999999999999999999999999997543 23456789999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN  339 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~  339 (1310)
                      |||.||+|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++...+||+|||+|+.........
T Consensus        96 e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~  175 (361)
T 3uc3_A           96 EYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK  175 (361)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred             EeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCC
Confidence            99999999999988788999999999999999999999999999999999999987665569999999998654433333


Q ss_pred             CcccchHHHhh--------------------------hcCCCccccCCCCCCCC------CCCcchhhhhhhcccchhhc
Q psy5279         340 PLEYDVRYVRQ--------------------------ALRHPWLNFADRKPTED------TPKLNTDALRNYYNLYKDWY  387 (1310)
Q Consensus       340 ~~~~t~~yv~~--------------------------~~r~P~l~~~~~~~~~~------~p~~~~~~~~~~~~~~~D~~  387 (1310)
                      ..++|+.|+++                          .++.||-..........      ...........+...+.|++
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li  255 (361)
T 3uc3_A          176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLI  255 (361)
T ss_dssp             -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHH
T ss_pred             CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHH
Confidence            34444443332                          23334432111000000      00000000001223345666


Q ss_pred             hhhhhhhcccCCCCCCccCCCcce
Q psy5279         388 GNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       388 ~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ...+..+...|+++.+++.|||..
T Consensus       256 ~~~L~~dP~~Rps~~ell~hp~f~  279 (361)
T 3uc3_A          256 SRIFVADPATRISIPEIKTHSWFL  279 (361)
T ss_dssp             HHHSCSCTTTSCCHHHHHTSHHHH
T ss_pred             HHHccCChhHCcCHHHHHhCcchh
Confidence            667777789999999999999973

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.97  E-value=3.9e-32  Score=314.26  Aligned_cols=108  Identities=26%  Similarity=0.434  Sum_probs=89.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      +..++.||+.||.|||++||+||||||+|||++. ..+.+||+|||+++........  ....+|+.|+|||++.+. .|
T Consensus       143 ~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~-~~~~~kL~DFG~a~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~  219 (394)
T 4e7w_A          143 IKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDP-PSGVLKLIDFGSAKILIAGEPN--VSYICSRYYRAPELIFGATNY  219 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET-TTTEEEECCCTTCEECCTTCCC--CSSCSCGGGCCHHHHTTCSSC
T ss_pred             HHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcC-CCCcEEEeeCCCcccccCCCCC--cccccCcCccCHHHHcCCCCC
Confidence            4556789999999999999999999999999973 2467999999999876433222  233567999999999765 58


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      +.++|||||||++|+|++|.+||.+.+..+..
T Consensus       220 ~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l  251 (394)
T 4e7w_A          220 TTNIDIWSTGCVMAELMQGQPLFPGESGIDQL  251 (394)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            99999999999999999999999988765543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.97  E-value=6.3e-32  Score=300.34  Aligned_cols=210  Identities=24%  Similarity=0.385  Sum_probs=160.8

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhh-chhhHHHHHHhcCCCCc--cc
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSL-RHERIASLLEAYKPSTT--AS  669 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~  669 (1310)
                      .+.+.|+++..|.+|.||.|.+|..+. ++..||.|++..+.+....+..|+..|+.| +|++|..+++.+.....  ..
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~   99 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVK-TGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   99 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCC
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECC-CCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcccc
Confidence            378899999999999999999987655 788999999999888889999999999999 89999999998865432  23


Q ss_pred             chhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccccccc
Q psy5279         670 NIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKT  749 (1310)
Q Consensus       670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  749 (1310)
                      +...+|||++.|.++..++..+..-                               .                       
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~-------------------------------~-----------------------  125 (326)
T 2x7f_A          100 DQLWLVMEFCGAGSVTDLIKNTKGN-------------------------------T-----------------------  125 (326)
T ss_dssp             CEEEEEEECCTTEEHHHHHHHSGGG-------------------------------C-----------------------
T ss_pred             ceEEEEEEcCCCCcHHHHHHhcccC-------------------------------C-----------------------
Confidence            5678999999998776555321000                               0                       


Q ss_pred             ccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcc
Q psy5279         750 WEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAP  829 (1310)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  829 (1310)
                                                                                                      
T Consensus       126 --------------------------------------------------------------------------------  125 (326)
T 2x7f_A          126 --------------------------------------------------------------------------------  125 (326)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCC
Q psy5279         830 VIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGD  909 (1310)
Q Consensus       830 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~  909 (1310)
                                                                                                      
T Consensus       126 --------------------------------------------------------------------------------  125 (326)
T 2x7f_A          126 --------------------------------------------------------------------------------  125 (326)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEE
Q psy5279         910 KLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKL  989 (1310)
Q Consensus       910 ~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL  989 (1310)
                                                       ........++.||+.||.|||++||+||||||+|||++.  ++.+||
T Consensus       126 ---------------------------------~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~--~~~~kl  170 (326)
T 2x7f_A          126 ---------------------------------LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE--NAEVKL  170 (326)
T ss_dssp             ---------------------------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT--TCCEEE
T ss_pred             ---------------------------------CCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcC--CCCEEE
Confidence                                             000113456789999999999999999999999999975  457999


Q ss_pred             EeeccceeeccCCcccccCCCCCCccccccccc-----CCCCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279         990 IDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA-----EEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus       990 ~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~-----~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +|||++........ ......|++.|+|||++.     +..++.++|||||||++|+|++|..||.+.+
T Consensus       171 ~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  238 (326)
T 2x7f_A          171 VDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH  238 (326)
T ss_dssp             CCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             eeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence            99999876532211 122335789999999997     5568899999999999999999999997654

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.97  E-value=1.9e-30  Score=292.16  Aligned_cols=230  Identities=20%  Similarity=0.342  Sum_probs=167.1

Q ss_pred             ccCCCeeee---ceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC-CCCcceEEEEEEeCCeE
Q psy5279         180 PITDAYDFG---DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       180 ~~~d~Y~i~---~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~~l  255 (1310)
                      +|.++|++.   +.||+|+||.||+|.++.+|+.||||++...   ....+.+|+.+|+.+. |||||+++++|.+.+.+
T Consensus         5 ~f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~   81 (325)
T 3kn6_A            5 PFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHT   81 (325)
T ss_dssp             HHHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             cchhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEE
Confidence            455677775   7899999999999999999999999999743   3456778999999997 99999999999999999


Q ss_pred             EEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccceeecC
Q psy5279         256 TIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr~i~~  334 (1310)
                      |||||||+||+|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++.++ +..+||+|||+|+....
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~  161 (325)
T 3kn6_A           82 FLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP  161 (325)
T ss_dssp             EEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred             EEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence            99999999999999999888899999999999999999999999999999999999998643 34799999999987654


Q ss_pred             CC-CCCCcccchHHHhhh-------------------------cCCCccccCCCCCC-----------CCCCCcchhhhh
Q psy5279         335 FG-KLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKPT-----------EDTPKLNTDALR  377 (1310)
Q Consensus       335 ~~-~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~-----------~~~p~~~~~~~~  377 (1310)
                      .. .....++|+.|+++.                         +..||-........           .....+..+...
T Consensus       162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  241 (325)
T 3kn6_A          162 DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWK  241 (325)
T ss_dssp             ----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHH
T ss_pred             CCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCccccc
Confidence            32 233445555544422                         23343221110000           000111112222


Q ss_pred             hhcccchhhchhhhhhhcccCCCCCCccCCCccee
Q psy5279         378 NYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       378 ~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      .+...+.|.+...+..+...|+++.+++.|||+..
T Consensus       242 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~  276 (325)
T 3kn6_A          242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD  276 (325)
T ss_dssp             TSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCT
T ss_pred             CCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhcc
Confidence            33445566666777778899999999999999853

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.97  E-value=3.1e-30  Score=285.58  Aligned_cols=155  Identities=26%  Similarity=0.509  Sum_probs=139.2

Q ss_pred             CccCCCeeee-ceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEE
Q psy5279         179 KPITDAYDFG-DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       179 ~~~~d~Y~i~-~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ..+.+.|++. +.||+|+||.||+|.++.+|+.||||++..........+.+|+.+|.++ +||||+++++++.+++.+|
T Consensus         8 ~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~   87 (316)
T 2ac3_A            8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY   87 (316)
T ss_dssp             CCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             cccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence            3578899995 7899999999999999999999999999876555677789999999985 7999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC-CeEEEEeeccceeec
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG-RHLLLTDFGLSRRIT  333 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~-~~VKLsDFGLAr~i~  333 (1310)
                      +||||++||+|.+.+.....+++.++..++.||+.||+|||++||+||||||+|||++.++. ..+||+|||+++.+.
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~  165 (316)
T 2ac3_A           88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK  165 (316)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred             EEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence            99999999999999988788999999999999999999999999999999999999986542 349999999998764

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.97  E-value=2.2e-30  Score=308.55  Aligned_cols=234  Identities=23%  Similarity=0.344  Sum_probs=181.7

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-------------chHHHHHHHHHHHHhcCCCCcceE
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-------------QYKSLFKNELDIMNQLCHRNLVRL  245 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-------------~~~~~~~rEI~IL~~L~HPNIVkL  245 (1310)
                      ..+.++|.+.+.||+|+||+||+|.++.+++.||+|++.+...             ...+.+.+|+.+|+.|+|||||++
T Consensus        32 ~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~  111 (504)
T 3q5i_A           32 GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL  111 (504)
T ss_dssp             SCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            4678899999999999999999999999999999999975421             235678899999999999999999


Q ss_pred             EEEEEeCCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC-CeEEEE
Q psy5279         246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG-RHLLLT  324 (1310)
Q Consensus       246 ~d~f~~~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~-~~VKLs  324 (1310)
                      +++|.+.+.+|||||||+||+|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++.++. ..+||+
T Consensus       112 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~  191 (504)
T 3q5i_A          112 FDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIV  191 (504)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred             EEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEE
Confidence            9999999999999999999999999988888999999999999999999999999999999999999986543 369999


Q ss_pred             eeccceeecCCCCCCCcccchHHHhhh------------------------cCCCccccCCCCC----CCCCCCcchhhh
Q psy5279         325 DFGLSRRITSFGKLNPLEYDVRYVRQA------------------------LRHPWLNFADRKP----TEDTPKLNTDAL  376 (1310)
Q Consensus       325 DFGLAr~i~~~~~l~~~~~t~~yv~~~------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~  376 (1310)
                      |||+|+.+.........++|+.|+++.                        +..||-.......    ......+....+
T Consensus       192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  271 (504)
T 3q5i_A          192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDW  271 (504)
T ss_dssp             CCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHH
T ss_pred             ECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccc
Confidence            999999887766666667776665432                        2223321100000    000011111222


Q ss_pred             hhhcccchhhchhhhhhhcccCCCCCCccCCCccee
Q psy5279         377 RNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       377 ~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      ..+...++|++...+..+...|+|+.+++.|||+..
T Consensus       272 ~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  307 (504)
T 3q5i_A          272 KNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKK  307 (504)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhh
Confidence            334445567777777778899999999999999753

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.97  E-value=9.4e-31  Score=310.95  Aligned_cols=233  Identities=23%  Similarity=0.341  Sum_probs=178.4

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ..+.++|++.+.||+|+||+||+|.++.+++.||+|++.+..  ......+.+|+.+|+.|+|||||+++++|.+.+.+|
T Consensus        33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  112 (494)
T 3lij_A           33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYY  112 (494)
T ss_dssp             CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence            457788999999999999999999999999999999997643  234567889999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccceeecCC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr~i~~~  335 (1310)
                      +|||||.||+|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++..+ ...+||+|||+|+.....
T Consensus       113 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~  192 (494)
T 3lij_A          113 LVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ  192 (494)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence            9999999999999998888899999999999999999999999999999999999997543 346999999999988776


Q ss_pred             CCCCCcccchHHHhhh------------------------cCCCccccCCCCC----CCCCCCcchhhhhhhcccchhhc
Q psy5279         336 GKLNPLEYDVRYVRQA------------------------LRHPWLNFADRKP----TEDTPKLNTDALRNYYNLYKDWY  387 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~~D~~  387 (1310)
                      ......++|+.|+++.                        +..||-.......    ......+....+..+...++|++
T Consensus       193 ~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  272 (494)
T 3lij_A          193 KKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLI  272 (494)
T ss_dssp             BCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHH
T ss_pred             ccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHH
Confidence            6666667776665432                        2223321110000    00000011111222334456666


Q ss_pred             hhhhhhhcccCCCCCCccCCCcce
Q psy5279         388 GNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       388 ~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ...+..+..+|+++.+++.|||+.
T Consensus       273 ~~~L~~dp~~R~s~~e~l~hp~~~  296 (494)
T 3lij_A          273 KQMLQFDSQRRISAQQALEHPWIK  296 (494)
T ss_dssp             HHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred             HHHCCCChhhCccHHHHhcCcccc
Confidence            666777789999999999999974

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.97  E-value=1.2e-32  Score=310.91  Aligned_cols=102  Identities=30%  Similarity=0.552  Sum_probs=68.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++..+ ...+||+|||+++......   .....+|+.|+|||++.+..++
T Consensus       131 ~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~  207 (336)
T 3fhr_A          131 AEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA---LQTPCYTPYYVAPEVLGPEKYD  207 (336)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-------------------------CHHH
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccccc---cccCCCCcCccChhhhCCCCCC
Confidence            44577999999999999999999999999997632 4569999999997654221   1233567999999999888899


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      .++|||||||++|+|++|..||.+..
T Consensus       208 ~~~Di~slG~il~~l~~g~~pf~~~~  233 (336)
T 3fhr_A          208 KSCDMWSLGVIMYILLCGFPPFYSNT  233 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCCcc
Confidence            99999999999999999999996543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=3e-31  Score=308.03  Aligned_cols=200  Identities=25%  Similarity=0.409  Sum_probs=167.9

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ..++|++.+.||+|+||.||+|.++.+|+.||+|++.+..   ......+.+|+.+|+.++|||||+++++|.+.+.+|+
T Consensus        13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l   92 (384)
T 4fr4_A           13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM   92 (384)
T ss_dssp             CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            3478999999999999999999999999999999997532   2234567899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      |||||.||+|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.++  ++||+|||+|+.+.....
T Consensus        93 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g--~vkL~DFG~a~~~~~~~~  170 (384)
T 4fr4_A           93 VVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHG--HVHITDFNIAAMLPRETQ  170 (384)
T ss_dssp             EECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEEECCCTTCEECCTTCC
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCC--CEEEeccceeeeccCCCc
Confidence            999999999999998888899999999999999999999999999999999999998665  899999999998877777


Q ss_pred             CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhh--chhhhhhhcccCCCC
Q psy5279         338 LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDW--YGNAAVRRYYRRRPL  401 (1310)
Q Consensus       338 l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~--~~~~~l~~~~~r~~~  401 (1310)
                      ..+.+||+.|+     +|++..+...              ..++...||  +|+.+...++.+.|.
T Consensus       171 ~~~~~gt~~Y~-----aPE~~~~~~~--------------~~~~~~~DiwSlG~il~elltG~~Pf  217 (384)
T 4fr4_A          171 ITTMAGTKPYM-----APEMFSSRKG--------------AGYSFAVDWWSLGVTAYELLRGRRPY  217 (384)
T ss_dssp             BCCCCSCGGGC-----CGGGTCCCSS--------------CCBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             eeccCCCcccc-----CCeeeccCCC--------------CCCCccceeechHHHHHHHHhCCCCC
Confidence            77888887765     5665422110              114445775  556666666666654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=5.3e-32  Score=308.54  Aligned_cols=98  Identities=28%  Similarity=0.427  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc---CCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA---EEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~---~~~ 1025 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++......     ....||+.|+|||++.   ...
T Consensus       157 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~DfG~a~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~  229 (348)
T 1u5q_A          157 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE--PGLVKLGDFGSASIMAPA-----NSFVGTPYWMAPEVILAMDEGQ  229 (348)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET--TTEEEECCCTTCBSSSSB-----CCCCSCGGGCCHHHHHTTSSCC
T ss_pred             HHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC--CCCEEEeeccCceecCCC-----CcccCCcceeCHhhhccccCCC
Confidence            446779999999999999999999999999985  567999999998765432     2235789999999985   567


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      ++.++|||||||++|+|++|..||.+.+
T Consensus       230 ~~~~~DiwslG~il~ell~g~~p~~~~~  257 (348)
T 1u5q_A          230 YDGKVDVWSLGITCIELAERKPPLFNMN  257 (348)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            8899999999999999999999997654

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.97  E-value=4e-31  Score=298.07  Aligned_cols=165  Identities=22%  Similarity=0.385  Sum_probs=146.4

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .++|++.+.||+|+||+||+|.++.+|+.||+|++.+..   ....+.+.+|+.+|+.++|||||+++++|.+.+.+|+|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            367999999999999999999999999999999997532   12345678899999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      |||++||+|.+.+.....+++..++.++.||+.||+|||++||+||||||+|||++.++  ++||+|||+|+....  ..
T Consensus        85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g--~~kL~Dfg~a~~~~~--~~  160 (318)
T 1fot_A           85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG--HIKITDFGFAKYVPD--VT  160 (318)
T ss_dssp             ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS--CEEECCCSSCEECSS--CB
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCC--CEEEeecCcceecCC--cc
Confidence            99999999999998888899999999999999999999999999999999999998655  899999999997644  23


Q ss_pred             CCcccchHHHhh
Q psy5279         339 NPLEYDVRYVRQ  350 (1310)
Q Consensus       339 ~~~~~t~~yv~~  350 (1310)
                      .+.+||+.|+++
T Consensus       161 ~~~~gt~~y~aP  172 (318)
T 1fot_A          161 YTLCGTPDYIAP  172 (318)
T ss_dssp             CCCCSCTTTCCH
T ss_pred             ccccCCccccCH
Confidence            456777766553

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=7.2e-31  Score=302.17  Aligned_cols=231  Identities=26%  Similarity=0.426  Sum_probs=174.0

Q ss_pred             cCCCeee--eceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         181 ITDAYDF--GDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       181 ~~d~Y~i--~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      +.+.|.+  .+.||+|+||.||+|.+..+|+.||+|++........+.+.+|+.+|++|+|||||+++++|...+.+|||
T Consensus        85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv  164 (373)
T 2x4f_A           85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLV  164 (373)
T ss_dssp             GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence            4455665  56899999999999999999999999999876656677899999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         259 SELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      ||||+||+|.+.+... ..+++.++..++.||+.||.|||++||+||||||+|||+..+++..+||+|||+|+.+.....
T Consensus       165 ~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~  244 (373)
T 2x4f_A          165 MEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK  244 (373)
T ss_dssp             EECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB
T ss_pred             EeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc
Confidence            9999999999988654 359999999999999999999999999999999999999755556899999999998876655


Q ss_pred             CCCcccchHHHhhh-------------------------cCCCccccCCCCCC----CCCCCcchhhhhhhcccchhhch
Q psy5279         338 LNPLEYDVRYVRQA-------------------------LRHPWLNFADRKPT----EDTPKLNTDALRNYYNLYKDWYG  388 (1310)
Q Consensus       338 l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~----~~~p~~~~~~~~~~~~~~~D~~~  388 (1310)
                      ....++|+.|+++.                         +..||....+....    ..........+..+...+.|++.
T Consensus       245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  324 (373)
T 2x4f_A          245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFIS  324 (373)
T ss_dssp             CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHH
T ss_pred             cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHH
Confidence            55556666554432                         22333221100000    00000111112233344566777


Q ss_pred             hhhhhhcccCCCCCCccCCCcce
Q psy5279         389 NAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       389 ~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ..+..+...|+++.+++.|||..
T Consensus       325 ~~L~~dp~~Rps~~e~l~hp~~~  347 (373)
T 2x4f_A          325 KLLIKEKSWRISASEALKHPWLS  347 (373)
T ss_dssp             TTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             HHcCCChhhCCCHHHHhcCcCcC
Confidence            77777889999999999999974

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.97  E-value=4.4e-32  Score=306.99  Aligned_cols=98  Identities=30%  Similarity=0.564  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCC-C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI-F 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~y-s 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++..........  ...||+.|+|||++.+..+ +
T Consensus       133 ~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~Dfg~a~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~  208 (335)
T 3dls_A          133 SYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAE--DFTIKLIDFGSAAYLERGKLFY--TFCGTIEYCAPEVLMGNPYRG  208 (335)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--TSCEEECCCTTCEECCTTCCBC--EECSCGGGCCHHHHTTCCBCS
T ss_pred             HHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcC--CCcEEEeecccceECCCCCcee--ccCCCccccChhhhcCCCCCC
Confidence            445679999999999999999999999999975  4679999999998765433222  2347799999999998877 6


Q ss_pred             CccchhHHHHHHHHHhcCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      .++|||||||++|+|++|..||.
T Consensus       209 ~~~DiwslG~il~el~~g~~pf~  231 (335)
T 3dls_A          209 PELEMWSLGVTLYTLVFEENPFC  231 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSCS
T ss_pred             CcccchhHHHHHHHHHhCCCchh
Confidence            78999999999999999999985

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.97  E-value=2.8e-30  Score=280.70  Aligned_cols=232  Identities=25%  Similarity=0.328  Sum_probs=177.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .+.++|++.+.||+|+||.||+|.++.++..||+|++........+.+.+|+.+|++++||||++++++|.+.+.+|+||
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (277)
T 3f3z_A            6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM   85 (277)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence            56788999999999999999999999999999999998655555678899999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC-CCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP-GGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~-~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      ||++|++|.+.+.....+++.++..++.|++.||.|||++||+||||||+|||+..+ .+..+||+|||+|+........
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~  165 (277)
T 3f3z_A           86 ELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM  165 (277)
T ss_dssp             ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB
T ss_pred             eccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch
Confidence            999999999999888889999999999999999999999999999999999999321 2347999999999988766555


Q ss_pred             CCcccchHHHhhh------------------------cCCCccccCCCCC----CCCCCCcchhhhhhhcccchhhchhh
Q psy5279         339 NPLEYDVRYVRQA------------------------LRHPWLNFADRKP----TEDTPKLNTDALRNYYNLYKDWYGNA  390 (1310)
Q Consensus       339 ~~~~~t~~yv~~~------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~~D~~~~~  390 (1310)
                      ...++|+.|.++.                        ...||-.......    ..............+...+.+.+...
T Consensus       166 ~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  245 (277)
T 3f3z_A          166 RTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRL  245 (277)
T ss_dssp             CCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHH
T ss_pred             hccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHH
Confidence            5556666554432                        2222211000000    00000000011112223334555555


Q ss_pred             hhhhcccCCCCCCccCCCcce
Q psy5279         391 AVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       391 ~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +-.+...|+++.+++.|||..
T Consensus       246 l~~dp~~R~s~~~~l~h~~~~  266 (277)
T 3f3z_A          246 LTKSPKQRITSLQALEHEWFE  266 (277)
T ss_dssp             TCSSTTTSCCHHHHTTSHHHH
T ss_pred             ccCChhhCcCHHHHhcCHHHh
Confidence            666788999999999999963

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.97  E-value=1.1e-31  Score=301.14  Aligned_cols=102  Identities=27%  Similarity=0.521  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-C
Q psy5279         948 DAYCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-P 1025 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~ 1025 (1310)
                      ...++.||+.||.|||+ +||+||||||+|||++.  +..+||+|||++......   ......|++.|+|||++.+. .
T Consensus       153 ~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~--~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~  227 (348)
T 2pml_X          153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDK--NGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESS  227 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECT--TSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCC
T ss_pred             HHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcC--CCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCC
Confidence            45567899999999999 99999999999999975  457999999998765432   22334577999999999987 6


Q ss_pred             CCC-ccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1026 IFP-QTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1026 ys~-ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      ++. ++|||||||++|+|++|..||.+.+.
T Consensus       228 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~  257 (348)
T 2pml_X          228 YNGAKVDIWSLGICLYVMFYNVVPFSLKIS  257 (348)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHSSCSSCCSSC
T ss_pred             CCcchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence            766 89999999999999999999987654

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.97  E-value=3e-30  Score=294.05  Aligned_cols=167  Identities=23%  Similarity=0.360  Sum_probs=147.4

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .++|++.+.||+|+||+||+|.++.+|+.||||++.+...   .....+.+|+.+|+++ +|||||+++++|.+.+.+|+
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            3679999999999999999999999999999999976422   2345678999999988 89999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec-CCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT-SFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~-~~~  336 (1310)
                      |||||+||+|.+.+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  ++||+|||+|+... ...
T Consensus        88 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g--~~kL~DFG~a~~~~~~~~  165 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIKLTDYGMCKEGLRPGD  165 (345)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--CEEECCGGGCBCSCCTTC
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCC--CEEEEeccccccccCCCC
Confidence            999999999999998878899999999999999999999999999999999999998665  89999999998743 333


Q ss_pred             CCCCcccchHHHhh
Q psy5279         337 KLNPLEYDVRYVRQ  350 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~  350 (1310)
                      ...+.+||+.|+++
T Consensus       166 ~~~~~~gt~~y~aP  179 (345)
T 3a8x_A          166 TTSTFCGTPNYIAP  179 (345)
T ss_dssp             CBCCCCSCGGGCCH
T ss_pred             cccccCCCccccCc
Confidence            45567888777654

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.97  E-value=2.8e-32  Score=295.70  Aligned_cols=99  Identities=28%  Similarity=0.585  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCC-CC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI-FP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~y-s~ 1028 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  +..+||+|||++........  .....+++.|+|||++.+..+ +.
T Consensus       115 ~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~  190 (276)
T 2h6d_A          115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLDA--HMNAKIADFGLSNMMSDGEF--LRTSCGSPNYAAPEVISGRLYAGP  190 (276)
T ss_dssp             HHHHHHHHHHHHHHHHCSSCCCCCGGGEEECT--TSCEEECCCCGGGCCCC---------------CCTGGGTTSCCCHH
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCChhhEEECC--CCCEEEeecccccccCCCcc--eecccCCccccCHHHHcCCCCCCc
Confidence            35679999999999999999999999999975  45799999999876543221  122346788999999887765 46


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      ++|+|||||++|+|++|..||.+.
T Consensus       191 ~~Di~slG~~l~~l~~g~~p~~~~  214 (276)
T 2h6d_A          191 EVDIWSCGVILYALLCGTLPFDDE  214 (276)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cchHHHHHHHHHHHHhCCCCCCCC
Confidence            788888888888888888888643

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=1.1e-30  Score=297.28  Aligned_cols=228  Identities=21%  Similarity=0.409  Sum_probs=175.0

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .+.+.|++.+.||+|+||+||+|.++.+|+.||||++.+....    ..+|+++|.++ +|||||+++++|.+.+.+|+|
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv   94 (342)
T 2qr7_A           19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV   94 (342)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred             CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence            5778899999999999999999999999999999999765322    34688898888 799999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC--CeEEEEeeccceeecCC-
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRRITSF-  335 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~--~~VKLsDFGLAr~i~~~-  335 (1310)
                      ||||.||+|.+.+...+.+++.++..++.||+.||+|||++||+||||||+|||+..+++  ..+||+|||+|+..... 
T Consensus        95 ~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~  174 (342)
T 2qr7_A           95 TELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN  174 (342)
T ss_dssp             ECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence            999999999999988888999999999999999999999999999999999999864432  35999999999987543 


Q ss_pred             CCCCCcccchHHHhh-------------------------hcCCCccccCCCCCCC-------CCCCcchhhhhhhcccc
Q psy5279         336 GKLNPLEYDVRYVRQ-------------------------ALRHPWLNFADRKPTE-------DTPKLNTDALRNYYNLY  383 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~-------------------------~~r~P~l~~~~~~~~~-------~~p~~~~~~~~~~~~~~  383 (1310)
                      +...+.++|+.|+++                         .+..||....+.....       ....+.......+...+
T Consensus       175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  254 (342)
T 2qr7_A          175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTA  254 (342)
T ss_dssp             CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHH
T ss_pred             CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHH
Confidence            334455666544332                         2344553211100000       00000001111233445


Q ss_pred             hhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         384 KDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       384 ~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +|.+...+..+...|+++.+++.|||+.
T Consensus       255 ~~li~~~L~~dP~~R~t~~~il~hp~~~  282 (342)
T 2qr7_A          255 KDLVSKMLHVDPHQRLTAALVLRHPWIV  282 (342)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred             HHHHHHHCCCChhHCcCHHHHhcCCeec
Confidence            6667777777889999999999999974

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.97  E-value=1.1e-30  Score=306.66  Aligned_cols=151  Identities=28%  Similarity=0.418  Sum_probs=126.3

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC-----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK-----  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-----  252 (1310)
                      .+.++|++.+.||+|+||+||+|.++.+|+.||||++....  ....+.+.+|+.+|+.|+|||||+++++|...     
T Consensus        50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  129 (458)
T 3rp9_A           50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKF  129 (458)
T ss_dssp             CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred             ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccC
Confidence            46689999999999999999999999999999999996542  23445688999999999999999999999443     


Q ss_pred             CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         253 DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      +.+|+||||+. |+|.+.+.....+++..++.+++||+.||+|||++|||||||||+|||++.++  .+||+|||+|+.+
T Consensus       130 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~--~~kl~DFGla~~~  206 (458)
T 3rp9_A          130 DELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDC--SVKVCDFGLARTV  206 (458)
T ss_dssp             CCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTC--CEEECCCTTCBCT
T ss_pred             ceEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCC--CEeecccccchhc
Confidence            57999999985 68999988877899999999999999999999999999999999999998665  8999999999976


Q ss_pred             c
Q psy5279         333 T  333 (1310)
Q Consensus       333 ~  333 (1310)
                      .
T Consensus       207 ~  207 (458)
T 3rp9_A          207 D  207 (458)
T ss_dssp             T
T ss_pred             c
Confidence            5

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.97  E-value=3.7e-31  Score=303.22  Aligned_cols=198  Identities=19%  Similarity=0.303  Sum_probs=162.9

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~ly  256 (1310)
                      -.++|++.+.||+|+||+||+|.++.+|+.||||++.+..   ....+.+.+|..+|..+ +||||++++++|.+.+.+|
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            3478999999999999999999999999999999997532   23345678899999988 8999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-C
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-F  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~  335 (1310)
                      ||||||+||+|.+.+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  ++||+|||+|+.... .
T Consensus        98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g--~vkL~DFG~a~~~~~~~  175 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG--HIKIADFGMCKENIWDG  175 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--CEEECCCTTCBCCCCTT
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCC--cEEEEeCCcccccccCC
Confidence            9999999999999998878899999999999999999999999999999999999998665  899999999987533 3


Q ss_pred             CCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhh--chhhhhhhcccCCCCC
Q psy5279         336 GKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDW--YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~--~~~~~l~~~~~r~~~~  402 (1310)
                      ....+.|||+.|++     |++..+                 .-++...||  .|..+...++.+.|..
T Consensus       176 ~~~~~~~gt~~y~a-----PE~~~~-----------------~~~~~~~DiwslG~il~ell~G~~Pf~  222 (353)
T 2i0e_A          176 VTTKTFCGTPDYIA-----PEIIAY-----------------QPYGKSVDWWAFGVLLYEMLAGQAPFE  222 (353)
T ss_dssp             CCBCCCCSCGGGCC-----HHHHTT-----------------CCBSTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccccccCCccccC-----hhhhcC-----------------CCcCCcccccchHHHHHHHHcCCCCCC
Confidence            34556788877764     444311                 114445785  4556666666665543

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.97  E-value=4.7e-31  Score=311.77  Aligned_cols=235  Identities=24%  Similarity=0.360  Sum_probs=184.0

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeE
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~l  255 (1310)
                      ..+.++|++.+.||+|+||.||+|.++.+|+.||||++.+..   ......+.+|+.+|++|+|||||+++++|.+.+.+
T Consensus        22 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  101 (484)
T 3nyv_A           22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF  101 (484)
T ss_dssp             CCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             CcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            467789999999999999999999999999999999997543   23467789999999999999999999999999999


Q ss_pred             EEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC-CCCeEEEEeeccceeecC
Q psy5279         256 TIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP-GGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~-~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+|||||.||+|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++.. .+..+||+|||+|+.+..
T Consensus       102 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  181 (484)
T 3nyv_A          102 YLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA  181 (484)
T ss_dssp             EEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence            9999999999999999888889999999999999999999999999999999999999642 235899999999998766


Q ss_pred             CCCCCCcccchHHHhh------------------------hcCCCccccCCCCC----CCCCCCcchhhhhhhcccchhh
Q psy5279         335 FGKLNPLEYDVRYVRQ------------------------ALRHPWLNFADRKP----TEDTPKLNTDALRNYYNLYKDW  386 (1310)
Q Consensus       335 ~~~l~~~~~t~~yv~~------------------------~~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~~D~  386 (1310)
                      .......++|+.|+++                        .+..||........    ......+.......+...++|+
T Consensus       182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  261 (484)
T 3nyv_A          182 SKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL  261 (484)
T ss_dssp             CCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHH
T ss_pred             ccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHH
Confidence            5554455566555442                        22333322110000    0000011112223344455777


Q ss_pred             chhhhhhhcccCCCCCCccCCCcceec
Q psy5279         387 YGNAAVRRYYRRRPLNSCYTHPSRMIY  413 (1310)
Q Consensus       387 ~~~~~l~~~~~r~~~~~cl~hpw~~~~  413 (1310)
                      +...+..+...|+|+.+++.|||+...
T Consensus       262 i~~~L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          262 IRKMLTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             HHHHCCCChhHCcCHHHHhhChhhccc
Confidence            777777889999999999999997543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.97  E-value=5.8e-32  Score=292.41  Aligned_cols=98  Identities=26%  Similarity=0.424  Sum_probs=79.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec-----------------CCCcEEEEeeccceeeccCCcccccCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-----------------RSVQVKLIDLGCTQRVTKLGTLIHPINT 1010 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~-----------------~~~~VKL~DFGlAk~~~~~g~~~~~~~t 1010 (1310)
                      ...++.||+.||.|||++||+||||||+|||++..                 ....+||+|||++.......     ...
T Consensus       117 ~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~  191 (289)
T 1x8b_A          117 LKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ-----VEE  191 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSC-----CCC
T ss_pred             HHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc-----ccC
Confidence            34567899999999999999999999999999743                 23469999999987654322     234


Q ss_pred             CCCcccccccccCC-CCCCccchhHHHHHHHHHhcCCCCCC
Q psy5279        1011 PNPEFAAPEVLAEE-PIFPQTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1011 Gtp~Y~APEvl~~~-~ys~ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      |++.|+|||++.+. .++.++|||||||++|+|++|.+||.
T Consensus       192 gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~  232 (289)
T 1x8b_A          192 GDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR  232 (289)
T ss_dssp             CCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred             CCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence            77999999999876 55678999999999999999987764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.97  E-value=1.5e-30  Score=296.18  Aligned_cols=231  Identities=25%  Similarity=0.385  Sum_probs=160.0

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+++.||||++....  ..+.+.+|+.+|++|+|||||+++++|...+.+|+||
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  127 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL  127 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence            56788999999999999999999999999999999997542  3456789999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeec-CCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH-PGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~-~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      ||++||+|.+.+...+.+++.++..++.||+.||.|||++||+||||||+|||++. +.+..+||+|||+|+........
T Consensus       128 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~  207 (349)
T 2w4o_A          128 ELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM  207 (349)
T ss_dssp             CCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred             EeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccccc
Confidence            99999999999988888999999999999999999999999999999999999975 22458999999999987655445


Q ss_pred             CCcccchHHHhhh-------------------------cCCCccccCCCCCC-----CCCCCcchhhhhhhcccchhhch
Q psy5279         339 NPLEYDVRYVRQA-------------------------LRHPWLNFADRKPT-----EDTPKLNTDALRNYYNLYKDWYG  388 (1310)
Q Consensus       339 ~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~-----~~~p~~~~~~~~~~~~~~~D~~~  388 (1310)
                      ...++|+.|+++.                         +..||.........     .............+...+.|.+.
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  287 (349)
T 2w4o_A          208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVR  287 (349)
T ss_dssp             -----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHH
T ss_pred             ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHH
Confidence            5566666655432                         12232211000000     00000000000112223355556


Q ss_pred             hhhhhhcccCCCCCCccCCCccee
Q psy5279         389 NAAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       389 ~~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      ..+..+...|+++.+++.|||+..
T Consensus       288 ~~L~~dP~~Rpt~~e~l~hp~~~~  311 (349)
T 2w4o_A          288 KLIVLDPKKRLTTFQALQHPWVTG  311 (349)
T ss_dssp             TTSCSSGGGSCCHHHHHHSTTTTS
T ss_pred             HHccCChhhCcCHHHHhcCcccCC
Confidence            666667889999999999999753

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.97  E-value=9.3e-31  Score=310.05  Aligned_cols=234  Identities=25%  Similarity=0.399  Sum_probs=179.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .+.++|++.+.||+|+||+||+|.++.+|+.||||++.+..  ......+.+|+.+|++|+|||||++++++.+.+.+|+
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l   98 (486)
T 3mwu_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (486)
T ss_dssp             HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence            57789999999999999999999999999999999996432  2345678899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccceeecCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |||||.||+|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++..+ +..+||+|||+|+......
T Consensus        99 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~  178 (486)
T 3mwu_A           99 VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (486)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred             EEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence            999999999999998888899999999999999999999999999999999999997533 3479999999999876665


Q ss_pred             CCCCcccchHHHhhh------------------------cCCCccccCCCCC----CCCCCCcchhhhhhhcccchhhch
Q psy5279         337 KLNPLEYDVRYVRQA------------------------LRHPWLNFADRKP----TEDTPKLNTDALRNYYNLYKDWYG  388 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~~D~~~  388 (1310)
                      .....++|+.|+++.                        +..||........    ......+.......+...++|++.
T Consensus       179 ~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  258 (486)
T 3mwu_A          179 KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR  258 (486)
T ss_dssp             ---CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHH
T ss_pred             ccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHH
Confidence            566667776665432                        2222211100000    000000111122233344566666


Q ss_pred             hhhhhhcccCCCCCCccCCCcceec
Q psy5279         389 NAAVRRYYRRRPLNSCYTHPSRMIY  413 (1310)
Q Consensus       389 ~~~l~~~~~r~~~~~cl~hpw~~~~  413 (1310)
                      ..+..+...|+|+.+++.|||+...
T Consensus       259 ~~L~~dp~~R~t~~~~l~hp~~~~~  283 (486)
T 3mwu_A          259 KMLTFHPSLRITATQCLEHPWIQKY  283 (486)
T ss_dssp             HHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred             HHcCCChhhCcCHHHHhcCHhhccC
Confidence            7777788999999999999997543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.97  E-value=5.4e-32  Score=301.43  Aligned_cols=104  Identities=24%  Similarity=0.381  Sum_probs=85.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec--CCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc---
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV--RSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA--- 1022 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~--~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~--- 1022 (1310)
                      ...++.||+.||.|||++||+||||||+|||+...  ....+||+|||+++........  ....||+.|+|||++.   
T Consensus       114 ~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~  191 (319)
T 4euu_A          114 FLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF--VSLYGTEEYLHPDMYERAV  191 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCB--CCCCSCGGGCCHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCce--eecccCCCccCHHHhhhcc
Confidence            34567899999999999999999999999998322  2456999999999876543322  2335789999999986   


Q ss_pred             -----CCCCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1023 -----EEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1023 -----~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                           +..++.++|||||||++|+|++|..||.+..
T Consensus       192 ~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  227 (319)
T 4euu_A          192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE  227 (319)
T ss_dssp             SCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTT
T ss_pred             ccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                 5678999999999999999999999997543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=2.4e-30  Score=288.84  Aligned_cols=232  Identities=28%  Similarity=0.490  Sum_probs=179.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc------chHHHHHHHHHHHHhcCCCCcceEEEEEEeCC
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN------QYKSLFKNELDIMNQLCHRNLVRLHDSYETKD  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~------~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~  253 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||+|++.....      ...+.+.+|+.+|++++||||+++++++.+.+
T Consensus         9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   88 (321)
T 2a2a_A            9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT   88 (321)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence            567889999999999999999999999999999999975432      13567899999999999999999999999999


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC--CeEEEEeecccee
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSRR  331 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~--~~VKLsDFGLAr~  331 (1310)
                      .+|+||||++||+|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++.  ..+||+|||+|+.
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~  168 (321)
T 2a2a_A           89 DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (321)
T ss_dssp             EEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence            99999999999999999988778999999999999999999999999999999999999986542  2699999999998


Q ss_pred             ecCCCCCCCcccchHHHhhh-------------------------cCCCccccCCCCC----CCCCCCcchhhhhhhccc
Q psy5279         332 ITSFGKLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKP----TEDTPKLNTDALRNYYNL  382 (1310)
Q Consensus       332 i~~~~~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~  382 (1310)
                      +.........++|+.|+++.                         +..||........    ..............+...
T Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (321)
T 2a2a_A          169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL  248 (321)
T ss_dssp             CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHH
T ss_pred             cCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHH
Confidence            87655555566666665432                         1222211100000    000000111111222333


Q ss_pred             chhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         383 YKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       383 ~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +.|++...+..+...|+++.+++.|||+.
T Consensus       249 ~~~li~~~l~~dp~~Rps~~e~l~hp~~~  277 (321)
T 2a2a_A          249 AKDFIRKLLVKETRKRLTIQEALRHPWIT  277 (321)
T ss_dssp             HHHHHHTTSCSSTTTSCCHHHHHHSTTTS
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhcCcccc
Confidence            45666666667788999999999999974

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.97  E-value=1.6e-30  Score=306.94  Aligned_cols=170  Identities=19%  Similarity=0.362  Sum_probs=147.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ...++|++.+.||+|+||+||+|.++.+|+.||+|++.+...   .....+.+|+.+|..++|||||+++++|.+.+.+|
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~  150 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLY  150 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEE
Confidence            345789999999999999999999999999999999975321   12234788999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         257 IISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ||||||+||+|.+.+.+ .+.+++..++.++.||+.||+|||++|||||||||+|||++.++  ++||+|||+|+.....
T Consensus       151 lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g--~vkL~DFGla~~~~~~  228 (437)
T 4aw2_A          151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG--HIRLADFGSCLKLMED  228 (437)
T ss_dssp             EEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEEECCCTTCEECCTT
T ss_pred             EEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCC--CEEEcchhhhhhcccC
Confidence            99999999999999976 46799999999999999999999999999999999999998665  8999999999887554


Q ss_pred             CC--CCCcccchHHHhhh
Q psy5279         336 GK--LNPLEYDVRYVRQA  351 (1310)
Q Consensus       336 ~~--l~~~~~t~~yv~~~  351 (1310)
                      +.  ....+||+.|+++.
T Consensus       229 ~~~~~~~~~GT~~Y~APE  246 (437)
T 4aw2_A          229 GTVQSSVAVGTPDYISPE  246 (437)
T ss_dssp             SCEECCSCCSCGGGCCHH
T ss_pred             CCcccccccCCcCeeChH
Confidence            32  23467888776643

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=1.9e-31  Score=309.76  Aligned_cols=154  Identities=19%  Similarity=0.334  Sum_probs=120.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC---CC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE---EP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~---~~ 1025 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  .+.+||+|||+++.......  .....||+.|+|||++.+   ..
T Consensus       118 ~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~--~g~vkL~DFG~a~~~~~~~~--~~~~~gt~~Y~aPE~~~~~~~~~  193 (384)
T 4fr4_A          118 KLFICELVMALDYLQNQRIIHRDMKPDNILLDE--HGHVHITDFNIAAMLPRETQ--ITTMAGTKPYMAPEMFSSRKGAG  193 (384)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TSCEEECCCTTCEECCTTCC--BCCCCSCGGGCCGGGTCCCSSCC
T ss_pred             HHHHHHHHHHHHHHHHCCceeccCcHHHeEECC--CCCEEEeccceeeeccCCCc--eeccCCCccccCCeeeccCCCCC
Confidence            445679999999999999999999999999975  56799999999987643322  233457899999999974   45


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCCh---hHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhc-HHhhh
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQSE---PETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWIT-LANNI 1100 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~~---~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit-~~e~L 1100 (1310)
                      |+.++|||||||++|+|++|..||.+.+.   .+....+......++   ..+++++++||.+|+. ++.+|++ +.+++
T Consensus       194 ~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~s~~~~l~  270 (384)
T 4fr4_A          194 YSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP---SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ  270 (384)
T ss_dssp             BCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred             CCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC---CcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence            88999999999999999999999986543   333333333333333   4678999999999987 5567887 78888


Q ss_pred             CCCcccccc
Q psy5279        1101 DHEFWHVKD 1109 (1310)
Q Consensus      1101 ~H~f~~~~~ 1109 (1310)
                      .|+||...+
T Consensus       271 ~hp~f~~~~  279 (384)
T 4fr4_A          271 NFPYMNDIN  279 (384)
T ss_dssp             TSGGGTTCC
T ss_pred             cChhhhcCC
Confidence            898876433

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.97  E-value=3.5e-30  Score=280.40  Aligned_cols=232  Identities=25%  Similarity=0.391  Sum_probs=177.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||+|++....  ......+.+|+.+|++++||||+++++++...+..|+
T Consensus         3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   82 (284)
T 3kk8_A            3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL   82 (284)
T ss_dssp             TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence            57899999999999999999999999999999999997543  2334568899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccceeecCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr~i~~~~  336 (1310)
                      ||||+.||+|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++.++ +..+||+|||+|+......
T Consensus        83 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~  162 (284)
T 3kk8_A           83 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE  162 (284)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred             EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence            999999999999998888899999999999999999999999999999999999997654 2459999999998877655


Q ss_pred             CCCCcccchHHHhhh-------------------------cCCCccccCCCCCC----CCCCCcchhhhhhhcccchhhc
Q psy5279         337 KLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKPT----EDTPKLNTDALRNYYNLYKDWY  387 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~----~~~p~~~~~~~~~~~~~~~D~~  387 (1310)
                      ......+|+.|.++.                         ++.||.........    .............+...+.+.+
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (284)
T 3kk8_A          163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI  242 (284)
T ss_dssp             BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHH
T ss_pred             cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHH
Confidence            555556666554432                         22233111000000    0000000000011222334555


Q ss_pred             hhhhhhhcccCCCCCCccCCCcce
Q psy5279         388 GNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       388 ~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ...+..+...|+++.+++.|||+.
T Consensus       243 ~~~l~~dp~~Rps~~~~l~h~~~~  266 (284)
T 3kk8_A          243 DSMLTVNPKKRITADQALKVPWIC  266 (284)
T ss_dssp             HHHSCSSTTTSCCHHHHTTSHHHH
T ss_pred             HHHcccChhhCCCHHHHhcCcccc
Confidence            556666788999999999999974

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.97  E-value=7.5e-31  Score=299.88  Aligned_cols=197  Identities=25%  Similarity=0.382  Sum_probs=163.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ...++|++.+.||+|+||.||+|.++.+|+.||||++.+..   ....+.+.+|+.+|+.++|||||+++++|.+.+.+|
T Consensus        38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  117 (350)
T 1rdq_E           38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY  117 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence            34578999999999999999999999999999999997532   123456789999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |||||++||+|.+.+...+.+++..++.++.||+.||+|||++||+||||||+|||++.++  ++||+|||+|+.+... 
T Consensus       118 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g--~~kL~DFg~a~~~~~~-  194 (350)
T 1rdq_E          118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRVKGR-  194 (350)
T ss_dssp             EEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEEECCCTTCEECSSC-
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCC--CEEEcccccceeccCC-
Confidence            9999999999999998878899999999999999999999999999999999999998655  8999999999987543 


Q ss_pred             CCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhh--chhhhhhhcccCCCCC
Q psy5279         337 KLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDW--YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~--~~~~~l~~~~~r~~~~  402 (1310)
                       ..+.+||+.|++     |++..+.                 -++...|+  .|+.+...++.+.|..
T Consensus       195 -~~~~~gt~~y~a-----PE~~~~~-----------------~~~~~~DiwslG~il~ell~g~~Pf~  239 (350)
T 1rdq_E          195 -TWTLCGTPEALA-----PEIILSK-----------------GYNKAVDWWALGVLIYEMAAGYPPFF  239 (350)
T ss_dssp             -BCCCEECGGGCC-----HHHHTTC-----------------CBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             -cccccCCccccC-----HHHhcCC-----------------CCCCcCCEecccHhHhHHhhCCCCCC
Confidence             345677777654     5543211                 13445774  5566666666665543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.97  E-value=1.2e-31  Score=294.87  Aligned_cols=84  Identities=21%  Similarity=0.263  Sum_probs=68.4

Q ss_pred             CcchhhhhhccccchhhhHHHHhhccccceeeeecccC-----cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccc
Q psy5279         596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS-----HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASN  670 (1310)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  670 (1310)
                      ++|++...|.+|.||.|.+|..+. ++..||.|++...     .+....+..|...|+.|+|++|..+++.+....  .+
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~   81 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSE-TLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE--KQ   81 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTT-TCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred             cceeEeeEEecCCCeEEEEEEECC-CCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC--CC
Confidence            689999999999999999887654 7889999998654     345678899999999999999999999874332  25


Q ss_pred             hhhHHHHhhcCc
Q psy5279         671 IAVLVMEKLQGA  682 (1310)
Q Consensus       671 ~~~~~~~~~~~~  682 (1310)
                      ...+|||++.|.
T Consensus        82 ~~~lv~e~~~~~   93 (305)
T 2wtk_C           82 KMYMVMEYCVCG   93 (305)
T ss_dssp             CEEEEEECCSEE
T ss_pred             eEEEEehhccCC
Confidence            668899999876

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.97  E-value=2.9e-31  Score=306.48  Aligned_cols=255  Identities=23%  Similarity=0.378  Sum_probs=179.6

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHH-HHhcCCCCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDI-MNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~I-L~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ..++|++.+.||+|+||+||+|.++.+++.||||++.+...   .....+.+|..+ ++.++|||||+++++|.+.+.+|
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~  115 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY  115 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence            34789999999999999999999999999999999976432   223345677776 57789999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec-CC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT-SF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~-~~  335 (1310)
                      ||||||+||+|.+.+.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++  ++||+|||+|+... ..
T Consensus       116 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g--~ikL~DFG~a~~~~~~~  193 (373)
T 2r5t_A          116 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG--HIVLTDFGLCKENIEHN  193 (373)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--CEEECCCCBCGGGBCCC
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCC--CEEEeeCccccccccCC
Confidence            9999999999999998888899999999999999999999999999999999999998765  89999999998743 33


Q ss_pred             CCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhh--chhhhhhhcccCCCCCCccCCCcceec
Q psy5279         336 GKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDW--YGNAAVRRYYRRRPLNSCYTHPSRMIY  413 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~--~~~~~l~~~~~r~~~~~cl~hpw~~~~  413 (1310)
                      ....+.|||+.|+     +|++..+.                 -++...||  .|+.+...++.+.|....         
T Consensus       194 ~~~~~~~gt~~y~-----aPE~~~~~-----------------~~~~~~DiwslG~il~ell~G~~Pf~~~---------  242 (373)
T 2r5t_A          194 STTSTFCGTPEYL-----APEVLHKQ-----------------PYDRTVDWWCLGAVLYEMLYGLPPFYSR---------  242 (373)
T ss_dssp             CCCCSBSCCCCCC-----CHHHHTTC-----------------CCCTHHHHHHHHHHHHHHHHSSCTTCCS---------
T ss_pred             CccccccCCcccc-----CHHHhCCC-----------------CCCchhhhHHHHHHHHHHHcCCCCCCCC---------
Confidence            4456678776655     45543211                 14445785  455666666665554321         


Q ss_pred             CCCCCCCCCCCCcceecccccccccccccccCCCCCCCcccc-cCCCCCCCCc-hhhHHHHhccCCCH
Q psy5279         414 PPGTQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWE-DNVPNRGPGG-ELLHSLTRQSYYTE  479 (1310)
Q Consensus       414 ~~~~~~tp~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~~~-d~v~e~~~~~-el~~~~~~~~~~~e  479 (1310)
                            ....+...| +...    ......++....+++..+ ..+++.+++. +.+.-|+++..|..
T Consensus       243 ------~~~~~~~~i-~~~~----~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~  299 (373)
T 2r5t_A          243 ------NTAEMYDNI-LNKP----LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL  299 (373)
T ss_dssp             ------BHHHHHHHH-HHSC----CCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred             ------CHHHHHHHH-Hhcc----cCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence                  111000110 1110    001122233334445444 6688888775 56777888877754

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.96  E-value=5.3e-30  Score=286.03  Aligned_cols=151  Identities=29%  Similarity=0.468  Sum_probs=132.7

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ..+.++|++.+.||+|+||+||+|.+. +|+.||+|++....  ......+.+|+.+|++++|||||++++++.+++.+|
T Consensus        17 q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   95 (311)
T 3niz_A           17 QGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT   95 (311)
T ss_dssp             ECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEE
T ss_pred             cchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEE
Confidence            367899999999999999999999985 59999999996542  233566889999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         257 IISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +|||||+| +|.+.+... ..+++.+++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+...
T Consensus        96 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~a~~~~  170 (311)
T 3niz_A           96 LVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG--ALKLADFGLARAFG  170 (311)
T ss_dssp             EEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC--CEEECCCTTCEETT
T ss_pred             EEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCC--CEEEccCcCceecC
Confidence            99999996 677776554 4599999999999999999999999999999999999998665  79999999998765

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.96  E-value=1.7e-31  Score=297.67  Aligned_cols=98  Identities=26%  Similarity=0.387  Sum_probs=80.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||++........  .....||+.|+|||++.+ .++.
T Consensus       160 ~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~--~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~  234 (311)
T 3p1a_A          160 WGYLRDTLLALAHLHSQGLVHLDVKPANIFLGP--RGRCKLGDFGLLVELGTAGA--GEVQEGDPRYMAPELLQG-SYGT  234 (311)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECG--GGCEEECCCTTCEECC--------CCCCCGGGCCGGGGGT-CCST
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC--CCCEEEccceeeeecccCCC--CcccCCCccccCHhHhcC-CCCc
Confidence            446779999999999999999999999999976  45699999999876543222  233457899999999886 6899


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ++|||||||++|+|++|..||.+
T Consensus       235 ~~DiwslG~il~el~~g~~~~~~  257 (311)
T 3p1a_A          235 AADVFSLGLTILEVACNMELPHG  257 (311)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCSS
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999776643

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.96  E-value=3.8e-30  Score=284.73  Aligned_cols=153  Identities=19%  Similarity=0.296  Sum_probs=133.7

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC------
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD------  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~------  253 (1310)
                      +.++|++.+.||+|+||.||+|.++.+|+.||||++.... ....+.+.+|+.+|++|+|||||+++++|.+..      
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   83 (332)
T 3qd2_B            4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE   83 (332)
T ss_dssp             HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred             hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence            4567999999999999999999999999999999997543 345677899999999999999999999986654      


Q ss_pred             ---------------------------------------------------eEEEEEecCCCCchHHHhhhcCC---CCH
Q psy5279         254 ---------------------------------------------------SFTIISELAGGGELLHSLTRQSY---YTE  279 (1310)
Q Consensus       254 ---------------------------------------------------~lyLVmEy~~GGeL~~~l~~~~~---lsE  279 (1310)
                                                                         .+|+|||||+||+|.+.+.....   .++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  163 (332)
T 3qd2_B           84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH  163 (332)
T ss_dssp             HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred             hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence                                                               38999999999999999876543   455


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         280 YDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       280 ~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.....
T Consensus       164 ~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~DfG~a~~~~~~  217 (332)
T 3qd2_B          164 GVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD--VVKVGDFGLVTAMDQD  217 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC--CEEECCCTTCEECSCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCC--CEEEeecCcccccccc
Confidence            67899999999999999999999999999999998655  8999999999987654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.96  E-value=4.6e-30  Score=300.53  Aligned_cols=168  Identities=23%  Similarity=0.377  Sum_probs=147.3

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ...++|++.+.||+|+||+||+|.++.+|+.||+|++.+..   ......+.+|+.+|+.++|||||+++++|.+++.+|
T Consensus        66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~  145 (410)
T 3v8s_A           66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY  145 (410)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence            34578999999999999999999999999999999997521   122334778999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      ||||||+||+|.+.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++  ++||+|||+|+.+...+
T Consensus       146 lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g--~ikL~DFG~a~~~~~~~  222 (410)
T 3v8s_A          146 MVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEG  222 (410)
T ss_dssp             EEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEEECCCTTCEECCTTS
T ss_pred             EEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCC--CEEEeccceeEeeccCC
Confidence            99999999999998865 4699999999999999999999999999999999999998665  89999999999876544


Q ss_pred             --CCCCcccchHHHhh
Q psy5279         337 --KLNPLEYDVRYVRQ  350 (1310)
Q Consensus       337 --~l~~~~~t~~yv~~  350 (1310)
                        ...+.+||+.|+++
T Consensus       223 ~~~~~~~~gt~~Y~AP  238 (410)
T 3v8s_A          223 MVRCDTAVGTPDYISP  238 (410)
T ss_dssp             EEECCSCCSCGGGCCH
T ss_pred             cccccCCcCCccccCH
Confidence              23467888887664

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.96  E-value=6.4e-31  Score=307.94  Aligned_cols=205  Identities=23%  Similarity=0.355  Sum_probs=163.5

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ...++|++.+.||+|+||+||+|.++.+|+.||||++.+...   .....+.+|+.+|..++|||||+++++|.+.+.+|
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~  137 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLY  137 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence            345789999999999999999999999999999999975321   22334788999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         257 IISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ||||||+||+|.+.+.+.+ .+++..++.++.||+.||+|||++|||||||||+|||++.++  ++||+|||+|+.+...
T Consensus       138 lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g--~vkL~DFGla~~~~~~  215 (412)
T 2vd5_A          138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCG--HIRLADFGSCLKLRAD  215 (412)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEEECCCTTCEECCTT
T ss_pred             EEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCC--CEEEeechhheeccCC
Confidence            9999999999999997754 699999999999999999999999999999999999998665  8999999999987654


Q ss_pred             CC--CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhh--chhhhhhhcccCCCC
Q psy5279         336 GK--LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDW--YGNAAVRRYYRRRPL  401 (1310)
Q Consensus       336 ~~--l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~--~~~~~l~~~~~r~~~  401 (1310)
                      +.  ....+||+.|++     |++.......          .....++...||  .|+.+...++.+.|.
T Consensus       216 ~~~~~~~~~Gt~~Y~A-----PE~l~~~~~~----------~~~~~~~~~~DiwSlGvilyelltG~~Pf  270 (412)
T 2vd5_A          216 GTVRSLVAVGTPDYLS-----PEILQAVGGG----------PGTGSYGPECDWWALGVFAYEMFYGQTPF  270 (412)
T ss_dssp             SCEECSSCCSCGGGCC-----HHHHHHHHTC----------TTCSEECTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CccccceeccccCcCC-----HHHHhhcccC----------cCCCCCChHHhhhHHhHHHHHHHhCCCCC
Confidence            43  234678877764     4432110000          001235566886  455666666666654

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=8e-30  Score=292.69  Aligned_cols=151  Identities=22%  Similarity=0.398  Sum_probs=125.5

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcC-CCCcceEEEEEEeCC--e
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLC-HRNLVRLHDSYETKD--S  254 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~--~  254 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||||++....  ......+.+|+.+|+.+. |||||+++++|..++  .
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence            35678999999999999999999999999999999996532  234456779999999997 999999999998655  7


Q ss_pred             EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         255 FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +|||||||. |+|...+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus        86 ~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~  161 (388)
T 3oz6_A           86 VYLVFDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAEC--HVKVADFGLSRSFVN  161 (388)
T ss_dssp             EEEEEECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC--CEEECCCTTCEESSS
T ss_pred             EEEEecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCC--CEEecCCcccccccc
Confidence            999999998 578877765 5799999999999999999999999999999999999998655  899999999997643

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.96  E-value=2.9e-30  Score=306.02  Aligned_cols=164  Identities=23%  Similarity=0.347  Sum_probs=133.9

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC--CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeC------
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETK------  252 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~--~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~------  252 (1310)
                      +.++|++.+.||+|+||+||+|.++.+|+.||||++...  .......+.+|+.+|+.++|||||+++++|...      
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  139 (464)
T 3ttj_A           60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF  139 (464)
T ss_dssp             EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence            457899999999999999999999999999999999754  223455678999999999999999999999765      


Q ss_pred             CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         253 DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ..+|||||||.++ |.+.+..  .+++.+++.+++||+.||+|||++||+||||||+|||++.++  .+||+|||+|+..
T Consensus       140 ~~~~lv~E~~~~~-l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~--~~kl~DFG~a~~~  214 (464)
T 3ttj_A          140 QDVYLVMELMDAN-LCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTA  214 (464)
T ss_dssp             CEEEEEEECCSEE-HHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--CEEECCCCCC---
T ss_pred             CeEEEEEeCCCCC-HHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCC--CEEEEEEEeeeec
Confidence            4679999999875 6565543  499999999999999999999999999999999999998655  8999999999988


Q ss_pred             cCCCCCCCcccchHHHh
Q psy5279         333 TSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv~  349 (1310)
                      ......++.++|+.|++
T Consensus       215 ~~~~~~~~~~gt~~y~a  231 (464)
T 3ttj_A          215 GTSFMMTPYVVTRYYRA  231 (464)
T ss_dssp             --CCCC----CCCTTCC
T ss_pred             CCCcccCCCcccccccC
Confidence            76656666676665544

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.96  E-value=4.4e-30  Score=306.27  Aligned_cols=229  Identities=19%  Similarity=0.249  Sum_probs=178.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ..++|.+.+.||+|+||+||+|.+..+|+.||||++....   ......+.+|+.+|+.++|||||++++++.+.+.+||
T Consensus        14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l   93 (476)
T 2y94_A           14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM   93 (476)
T ss_dssp             EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            4578999999999999999999999999999999997532   1234568899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      |||||+||+|.+.+...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.......
T Consensus        94 v~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~--~vkL~DFG~a~~~~~~~~  171 (476)
T 2y94_A           94 VMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEF  171 (476)
T ss_dssp             EEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTC--CEEECCCSSCEECCTTCC
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCC--CeEEEeccchhhcccccc
Confidence            999999999999998888899999999999999999999999999999999999998655  799999999998877666


Q ss_pred             CCCcccchHHHhhhcCC--Cccc-------cC-------CCCCCCCCCCcchhhhhh-----------hcccchhhchhh
Q psy5279         338 LNPLEYDVRYVRQALRH--PWLN-------FA-------DRKPTEDTPKLNTDALRN-----------YYNLYKDWYGNA  390 (1310)
Q Consensus       338 l~~~~~t~~yv~~~~r~--P~l~-------~~-------~~~~~~~~p~~~~~~~~~-----------~~~~~~D~~~~~  390 (1310)
                      ..+.+||+.|+++....  +...       +|       ...+.+. .....+....           +...+.|.+...
T Consensus       172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~-~~~~~~~~~~i~~~~~~~p~~~s~~~~~Li~~~  250 (476)
T 2y94_A          172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD-DDHVPTLFKKICDGIFYTPQYLNPSVISLLKHM  250 (476)
T ss_dssp             BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSC-CSSSHHHHHHHHTTCCCCCTTCCHHHHHHHHHH
T ss_pred             ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCC-CCCHHHHHHHHhcCCcCCCccCCHHHHHHHHHH
Confidence            67778887766542111  0000       00       0011111 0001111111           122335566666


Q ss_pred             hhhhcccCCCCCCccCCCccee
Q psy5279         391 AVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       391 ~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      +..+...|+++.+++.|||...
T Consensus       251 L~~dP~~Rpt~~eil~hp~~~~  272 (476)
T 2y94_A          251 LQVDPMKRATIKDIREHEWFKQ  272 (476)
T ss_dssp             TCSSTTTSCCHHHHHTCHHHHT
T ss_pred             cCCCchhCcCHHHHHhCHHhhh
Confidence            6677889999999999999753

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.96  E-value=1.1e-31  Score=292.68  Aligned_cols=93  Identities=19%  Similarity=0.276  Sum_probs=77.1

Q ss_pred             CcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCC---------
Q psy5279         596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPST---------  666 (1310)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  666 (1310)
                      +.|+++..|.+|.||.|.+|..+. ++..||.|.+..+.+...++..|...|+.|+|++|..+++++....         
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNAL-DSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             ccchhhheeccCCcEEEEEEEEcC-CCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            468999999999999999987655 7889999999888888889999999999999999999988775321         


Q ss_pred             cccchhhHHHHhhcCchhhhhhh
Q psy5279         667 TASNIAVLVMEKLQGADVLSYLS  689 (1310)
Q Consensus       667 ~~~~~~~~~~~~~~~~~~~~~~~  689 (1310)
                      ...+...+|||++.|.++..++.
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~  107 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIH  107 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHH
T ss_pred             ccCCceEEEEecCCCCCHHHhhh
Confidence            22466788999999888766553

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.96  E-value=3e-30  Score=292.00  Aligned_cols=224  Identities=19%  Similarity=0.273  Sum_probs=176.5

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc--------hHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--------YKSLFKNELDIMNQLCHRNLVRLHDSYET  251 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~--------~~~~~~rEI~IL~~L~HPNIVkL~d~f~~  251 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||||++......        ....+.+|+.+|+.++|||||+++++|.+
T Consensus        21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~  100 (335)
T 3dls_A           21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN  100 (335)
T ss_dssp             HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence            5678899999999999999999999999999999999764321        22346789999999999999999999999


Q ss_pred             CCeEEEEEecCCCC-chHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         252 KDSFTIISELAGGG-ELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       252 ~~~lyLVmEy~~GG-eL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      .+.+++||||+.+| +|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+
T Consensus       101 ~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~a~  178 (335)
T 3dls_A          101 QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDF--TIKLIDFGSAA  178 (335)
T ss_dssp             SSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS--CEEECCCTTCE
T ss_pred             CCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCC--cEEEeecccce
Confidence            99999999999777 9999998887899999999999999999999999999999999999998654  89999999999


Q ss_pred             eecCCCCCCCcccchHHHhhh--------------------------cCCCccccCCCCCCCCCCCcchhhhhhhcccch
Q psy5279         331 RITSFGKLNPLEYDVRYVRQA--------------------------LRHPWLNFADRKPTEDTPKLNTDALRNYYNLYK  384 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~~~--------------------------~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~  384 (1310)
                      .+.......+.++|+.|+++.                          ...||............++      ..+...+.
T Consensus       179 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~------~~~~~~l~  252 (335)
T 3dls_A          179 YLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPP------YLVSKELM  252 (335)
T ss_dssp             ECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTTCCCCS------SCCCHHHH
T ss_pred             ECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhhccCCC------cccCHHHH
Confidence            887666555666776665432                          2223321111000000000      01123345


Q ss_pred             hhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         385 DWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       385 D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +++...+..+...|+++.+++.|||..
T Consensus       253 ~li~~~L~~dP~~Rps~~ell~hp~~~  279 (335)
T 3dls_A          253 SLVSGLLQPVPERRTTLEKLVTDPWVT  279 (335)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHCTTTT
T ss_pred             HHHHHHccCChhhCcCHHHHhcCcccc
Confidence            666666777789999999999999974

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.96  E-value=6.7e-30  Score=299.03  Aligned_cols=152  Identities=28%  Similarity=0.413  Sum_probs=136.5

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC-----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK-----  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-----  252 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||||++....  ....+.+.+|+.+|+.|+|||||++++++...     
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~  102 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF  102 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence            46789999999999999999999999999999999997542  23445688999999999999999999999877     


Q ss_pred             CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         253 DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      +.+||||||+. |+|.+.+.....+++..++.+++||+.||+|||++||+||||||+|||++.++  .+||+|||+|+..
T Consensus       103 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~--~~kL~DFGla~~~  179 (432)
T 3n9x_A          103 DELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDC--SVKVCDFGLARTI  179 (432)
T ss_dssp             CCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC--CEEECCCTTCEEC
T ss_pred             CeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCC--CEEEccCCCcccc
Confidence            57999999987 59999998877899999999999999999999999999999999999998655  7999999999987


Q ss_pred             cC
Q psy5279         333 TS  334 (1310)
Q Consensus       333 ~~  334 (1310)
                      ..
T Consensus       180 ~~  181 (432)
T 3n9x_A          180 NS  181 (432)
T ss_dssp             --
T ss_pred             cc
Confidence            54

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.96  E-value=8.8e-30  Score=284.63  Aligned_cols=150  Identities=28%  Similarity=0.434  Sum_probs=120.4

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .++|++.+.||+|+||.||+|.++.+|+.||+|++.... ......+.+|+.+|+.++|||||++++++.+++.+|||||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            467999999999999999999999999999999997543 2344678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhc------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         261 LAGGGELLHSLTRQ------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       261 y~~GGeL~~~l~~~------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+.| +|.+.+...      ..+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+....
T Consensus        84 ~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~  160 (317)
T 2pmi_A           84 FMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRG--QLKLGDFGLARAFGI  160 (317)
T ss_dssp             CCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC--CEEECCCSSCEETTS
T ss_pred             ecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCC--CEEECcCccceecCC
Confidence            9994 888877543      3589999999999999999999999999999999999998665  799999999987643

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.96  E-value=2.2e-31  Score=291.41  Aligned_cols=104  Identities=28%  Similarity=0.495  Sum_probs=82.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc----ccccCCCCCCcccccccccC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT----LIHPINTPNPEFAAPEVLAE 1023 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~----~~~~~~tGtp~Y~APEvl~~ 1023 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++......+.    .......|++.|+|||++.+
T Consensus       123 ~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (303)
T 2vwi_A          123 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGE--DGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ  200 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT--TCCEEECCCHHHHHCC---------------CCCTTCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcC--CCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhcc
Confidence            4556789999999999999999999999999975  45799999999865432211    11123457899999999976


Q ss_pred             -CCCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1024 -EPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1024 -~~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                       ..++.++|||||||++|+|++|..||.+..
T Consensus       201 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  231 (303)
T 2vwi_A          201 VRGYDFKADIWSFGITAIELATGAAPYHKYP  231 (303)
T ss_dssp             HHCCCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             ccCCCchhhHHHHHHHHHHHHhCCCCCccCc
Confidence             568899999999999999999999997654

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.96  E-value=3.3e-31  Score=294.69  Aligned_cols=105  Identities=21%  Similarity=0.384  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++........ ......+++.|+|||++.+..+
T Consensus       139 ~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  216 (323)
T 3qup_A          139 LVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAE--DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLY  216 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT--TSCEEECCCCC-----------------CCGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcC--CCCEEEeeccccccccccccccccccccCcccccCchhhcCCCC
Confidence            3456789999999999999999999999999975  467999999999765432221 1122345678999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCCh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSE 1054 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~ 1054 (1310)
                      +.++|||||||++|+|++ |..||.+.+.
T Consensus       217 ~~~~Di~slG~il~ell~~g~~p~~~~~~  245 (323)
T 3qup_A          217 TVHSDVWAFGVTMWEIMTRGQTPYAGIEN  245 (323)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCG
T ss_pred             CCccchhhHHHHHHHHHhCCCCCccccCh
Confidence            999999999999999999 9999987544

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.96  E-value=1.6e-29  Score=279.20  Aligned_cols=151  Identities=23%  Similarity=0.371  Sum_probs=137.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .++|++.+.||+|+||.||+|.+..+|+.||+|++.....  ...+.+.+|+.+|++++||||+++++++...+.+++||
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF   81 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence            4689999999999999999999999999999999865432  23556789999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ||+++++|...+.....+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+|+....
T Consensus        82 e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~  154 (311)
T 4agu_A           82 EYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHS--VIKLCDFGFARLLTG  154 (311)
T ss_dssp             ECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEEECCCTTCEECC-
T ss_pred             EeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCC--CEEEeeCCCchhccC
Confidence            9999999998887777899999999999999999999999999999999999998655  899999999988753

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.96  E-value=1.6e-29  Score=278.53  Aligned_cols=165  Identities=27%  Similarity=0.463  Sum_probs=136.8

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc--------------------------hHHHHHHHHHHHH
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--------------------------YKSLFKNELDIMN  235 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~--------------------------~~~~~~rEI~IL~  235 (1310)
                      .++|++.+.||+|+||.||+|.++.+|+.||||++......                          ..+.+.+|+.+|+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999754211                          1245789999999


Q ss_pred             hcCCCCcceEEEEEEe--CCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEe
Q psy5279         236 QLCHRNLVRLHDSYET--KDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLV  313 (1310)
Q Consensus       236 ~L~HPNIVkL~d~f~~--~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL  313 (1310)
                      .|+||||+++++++.+  .+.+|+||||+++|+|.+.+. ...+++.++..++.||+.||.|||++||+||||||+|||+
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~  170 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV  170 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE
Confidence            9999999999999987  578999999999999987653 4579999999999999999999999999999999999999


Q ss_pred             ecCCCCeEEEEeeccceeecCCC-CCCCcccchHHHh
Q psy5279         314 AHPGGRHLLLTDFGLSRRITSFG-KLNPLEYDVRYVR  349 (1310)
Q Consensus       314 ~~~~~~~VKLsDFGLAr~i~~~~-~l~~~~~t~~yv~  349 (1310)
                      +.++  .+||+|||+|+.+.... .....++|+.|++
T Consensus       171 ~~~~--~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~a  205 (298)
T 2zv2_A          171 GEDG--HIKIADFGVSNEFKGSDALLSNTVGTPAFMA  205 (298)
T ss_dssp             CTTS--CEEECCCTTCEECSSSSCEECCCCSCGGGCC
T ss_pred             CCCC--CEEEecCCCccccccccccccCCcCCccccC
Confidence            8655  79999999999875432 2233455655544

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.96  E-value=8.3e-31  Score=307.26  Aligned_cols=218  Identities=22%  Similarity=0.343  Sum_probs=165.2

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC---CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~---~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ..++|++.+.||+|+||.||+|.++.+|+.||||++...   .......+.+|+.+|+.++|||||+++++|.+.+.+||
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l  225 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF  225 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence            347899999999999999999999999999999999753   22233456789999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-C
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-F  335 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~  335 (1310)
                      |||||+||+|.+.+.....+++..++.++.||+.||+|||+ +||+||||||+|||++.++  .+||+|||+|+.... .
T Consensus       226 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~~~  303 (446)
T 4ejn_A          226 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGLCKEGIKDG  303 (446)
T ss_dssp             EECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSS--CEEECCCCCCCTTCC--
T ss_pred             EEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCC--CEEEccCCCceeccCCC
Confidence            99999999999999888889999999999999999999998 9999999999999998655  899999999986433 3


Q ss_pred             CCCCCcccchHHHhhh-------------------------cCCCccccCCCCCCCCCCCcchhhhh-----------hh
Q psy5279         336 GKLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKPTEDTPKLNTDALR-----------NY  379 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~~~~p~~~~~~~~-----------~~  379 (1310)
                      ......+||+.|+++.                         ++.||....           ..+...           .+
T Consensus       304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----------~~~~~~~i~~~~~~~p~~~  372 (446)
T 4ejn_A          304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----------HEKLFELILMEEIRFPRTL  372 (446)
T ss_dssp             ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHHCCCCCCTTS
T ss_pred             cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-----------HHHHHHHHHhCCCCCCccC
Confidence            3455677887776542                         122221100           000100           12


Q ss_pred             cccchhhchhhhhhhcccCC-----CCCCccCCCcce
Q psy5279         380 YNLYKDWYGNAAVRRYYRRR-----PLNSCYTHPSRM  411 (1310)
Q Consensus       380 ~~~~~D~~~~~~l~~~~~r~-----~~~~cl~hpw~~  411 (1310)
                      ...+.|++...+..+...|+     ++.+++.|||..
T Consensus       373 ~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~  409 (446)
T 4ejn_A          373 GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA  409 (446)
T ss_dssp             CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGT
T ss_pred             CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCcccc
Confidence            23346666777777788998     899999999974

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.96  E-value=1.2e-29  Score=278.74  Aligned_cols=171  Identities=25%  Similarity=0.405  Sum_probs=142.1

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      +.+.++|.+.+.||+|+||.||+|.++.+|+.+|+|++.... ....+.+.+|+.+|+.++||||+++++++.+.+.+|+
T Consensus        18 g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   97 (285)
T 3is5_A           18 GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYI   97 (285)
T ss_dssp             SCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEE
Confidence            357789999999999999999999999999999999997543 3345778899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccceee
Q psy5279         258 ISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI  332 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr~i  332 (1310)
                      ||||++||+|.+.+..    ...+++..+..++.||+.||+|||++||+||||||+|||++.++ ...+||+|||+|+..
T Consensus        98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A           98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF  177 (285)
T ss_dssp             EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred             EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence            9999999999988853    35699999999999999999999999999999999999996432 357999999999877


Q ss_pred             cCCCCCCCcccchHHHh
Q psy5279         333 TSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv~  349 (1310)
                      .........++|+.|.+
T Consensus       178 ~~~~~~~~~~~t~~y~a  194 (285)
T 3is5_A          178 KSDEHSTNAAGTALYMA  194 (285)
T ss_dssp             ---------CTTGGGCC
T ss_pred             CCcccCcCcccccCcCC
Confidence            65544445555655544

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.96  E-value=2.2e-30  Score=291.53  Aligned_cols=167  Identities=25%  Similarity=0.420  Sum_probs=135.6

Q ss_pred             cCCCeeeeceecccCceEEEEEEEc---CCCcEEEEEEEecCC----cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVER---SSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k---~Tg~~vAIKiI~~~~----~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~  253 (1310)
                      ..++|++.+.||+|+||.||+|.+.   .+|+.||+|++.+..    ......+.+|+.+|+.++|||||+++++|...+
T Consensus        15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   94 (327)
T 3a62_A           15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG   94 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence            4578999999999999999999985   789999999997542    223445778999999999999999999999999


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .+|+|||||+||+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+...
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~--~~kl~Dfg~~~~~~  172 (327)
T 3a62_A           95 KLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG--HVKLTDFGLCKESI  172 (327)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTS--CEEECCCSCC----
T ss_pred             EEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCC--cEEEEeCCcccccc
Confidence            9999999999999999998888899999999999999999999999999999999999998655  89999999998654


Q ss_pred             CC-CCCCCcccchHHHh
Q psy5279         334 SF-GKLNPLEYDVRYVR  349 (1310)
Q Consensus       334 ~~-~~l~~~~~t~~yv~  349 (1310)
                      .. ......+||+.|++
T Consensus       173 ~~~~~~~~~~gt~~y~a  189 (327)
T 3a62_A          173 HDGTVTHTFCGTIEYMA  189 (327)
T ss_dssp             ------CTTSSCCTTSC
T ss_pred             cCCccccccCCCcCccC
Confidence            32 23344566665554

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.96  E-value=2.3e-29  Score=288.60  Aligned_cols=151  Identities=17%  Similarity=0.320  Sum_probs=137.6

Q ss_pred             cCCCeeeeceeccc--CceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRG--VTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~G--sFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      -.++|++.+.||+|  +||.||+|.++.+|+.||||++....  ......+.+|+.+|+.++|||||+++++|.+.+.+|
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            45789999999999  99999999999999999999997543  234566889999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         257 IISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +|||||+||+|.+.+...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||++....
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~--~~kl~dfg~~~~~~  179 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG--KVYLSGLRSNLSMI  179 (389)
T ss_dssp             EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEECCGGGCEECE
T ss_pred             EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CEEEcccccceeec
Confidence            999999999999998765  5699999999999999999999999999999999999998655  89999999987654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.96  E-value=1.8e-29  Score=279.37  Aligned_cols=167  Identities=30%  Similarity=0.414  Sum_probs=138.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-----cchHHHHHHHHHHHHhcC---CCCcceEEEEEEe
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-----NQYKSLFKNELDIMNQLC---HRNLVRLHDSYET  251 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-----~~~~~~~~rEI~IL~~L~---HPNIVkL~d~f~~  251 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||||++....     ......+.+|+.+|+.+.   |||||+++++|..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~   85 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT   85 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred             ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence            45689999999999999999999999999999999986432     122345678888887775   9999999999988


Q ss_pred             CC-----eEEEEEecCCCCchHHHhhhcCC--CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEE
Q psy5279         252 KD-----SFTIISELAGGGELLHSLTRQSY--YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT  324 (1310)
Q Consensus       252 ~~-----~lyLVmEy~~GGeL~~~l~~~~~--lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLs  324 (1310)
                      ..     .+++||||+.| +|.+.+.....  +++.+++.++.||+.||+|||++||+||||||+|||++.++  .+||+
T Consensus        86 ~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~--~~kl~  162 (308)
T 3g33_A           86 SRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG--TVKLA  162 (308)
T ss_dssp             CCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTS--CEEEC
T ss_pred             cCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC--CEEEe
Confidence            66     58999999984 89888876544  99999999999999999999999999999999999998655  79999


Q ss_pred             eeccceeecCCCCCCCcccchHHHh
Q psy5279         325 DFGLSRRITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       325 DFGLAr~i~~~~~l~~~~~t~~yv~  349 (1310)
                      |||+|+.........+.++|+.|++
T Consensus       163 Dfg~a~~~~~~~~~~~~~gt~~y~a  187 (308)
T 3g33_A          163 DFGLARIYSYQMALTPVVVTLWYRA  187 (308)
T ss_dssp             SCSCTTTSTTCCCSGGGGCCCSSCC
T ss_pred             eCccccccCCCcccCCccccccccC
Confidence            9999998766555555666655544

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.96  E-value=1.4e-29  Score=294.17  Aligned_cols=228  Identities=22%  Similarity=0.347  Sum_probs=162.6

Q ss_pred             ccCCCeeee-ceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHH-hcCCCCcceEEEEEEe----CC
Q psy5279         180 PITDAYDFG-DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMN-QLCHRNLVRLHDSYET----KD  253 (1310)
Q Consensus       180 ~~~d~Y~i~-~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~-~L~HPNIVkL~d~f~~----~~  253 (1310)
                      .+.+.|.+. +.||+|+||+||+|.++.+|+.||||++...     ..+.+|+.++. .++|||||+++++|..    .+
T Consensus        58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~  132 (400)
T 1nxk_A           58 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRK  132 (400)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred             cccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence            345667776 7899999999999999999999999999632     35678999874 5589999999999986    67


Q ss_pred             eEEEEEecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccce
Q psy5279         254 SFTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSR  330 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr  330 (1310)
                      .+|||||||.||+|.+.+....  .+++.+++.++.||+.||.|||++||+||||||+|||++.++ +..+||+|||+|+
T Consensus       133 ~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~  212 (400)
T 1nxk_A          133 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  212 (400)
T ss_dssp             EEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             EEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence            8999999999999999997653  499999999999999999999999999999999999998632 3589999999999


Q ss_pred             eecCCCCCCCcccchHHHhhh-------------------------cCCCccccCCCCCCCC--------CCCcchhhhh
Q psy5279         331 RITSFGKLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKPTED--------TPKLNTDALR  377 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~~~--------~p~~~~~~~~  377 (1310)
                      .........+.+||+.|+++.                         ++.||...........        ...+......
T Consensus       213 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  292 (400)
T 1nxk_A          213 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS  292 (400)
T ss_dssp             ECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTT
T ss_pred             ccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccc
Confidence            876655555666665554432                         2233322111000000        0000000111


Q ss_pred             hhcccchhhchhhhhhhcccCCCCCCccCCCccee
Q psy5279         378 NYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       378 ~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      .+...+.|++...+..+...|+++.+++.|||+..
T Consensus       293 ~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~  327 (400)
T 1nxk_A          293 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ  327 (400)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             cCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccC
Confidence            22333456666666777889999999999999753

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.96  E-value=2.1e-29  Score=280.82  Aligned_cols=224  Identities=20%  Similarity=0.232  Sum_probs=163.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~ly  256 (1310)
                      .+.++|++.+.||+|+||+||+|.++.+|+.||||++.....  .......+|+..+..+ +|||||+++++|...+.+|
T Consensus        54 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~  133 (311)
T 3p1a_A           54 FFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY  133 (311)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             hhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEE
Confidence            355789999999999999999999999999999999865432  2333455666666555 9999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         257 IISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |||||+ +|+|.+.+... ..+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.....
T Consensus       134 lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~--~~kl~DFG~a~~~~~~  210 (311)
T 3p1a_A          134 LQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRG--RCKLGDFGLLVELGTA  210 (311)
T ss_dssp             EEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGG--CEEECCCTTCEECC--
T ss_pred             EEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC--CEEEccceeeeecccC
Confidence            999999 56887777654 3599999999999999999999999999999999999998655  7999999999988665


Q ss_pred             CCCCCcccchHHHhhhcCCCccccCCCCCCCC---------------CCCcchh-------------hhhhhcccchhhc
Q psy5279         336 GKLNPLEYDVRYVRQALRHPWLNFADRKPTED---------------TPKLNTD-------------ALRNYYNLYKDWY  387 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~---------------~p~~~~~-------------~~~~~~~~~~D~~  387 (1310)
                      ......+||+.|++     |++..+...+..+               .++...+             ....+...+.+++
T Consensus       211 ~~~~~~~gt~~y~a-----PE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  285 (311)
T 3p1a_A          211 GAGEVQEGDPRYMA-----PELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVL  285 (311)
T ss_dssp             ----CCCCCGGGCC-----GGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHH
T ss_pred             CCCcccCCCccccC-----HhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHH
Confidence            55555667776654     3332210000000               0111111             1111223334555


Q ss_pred             hhhhhhhcccCCCCCCccCCCcce
Q psy5279         388 GNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       388 ~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ...+-.+...|+++.+++.|||+.
T Consensus       286 ~~~L~~dP~~Rpt~~ell~hp~~~  309 (311)
T 3p1a_A          286 VMMLEPDPKLRATAEALLALPVLR  309 (311)
T ss_dssp             HHHSCSSTTTSCCHHHHHTSGGGS
T ss_pred             HHHcCCChhhCcCHHHHHhCcccc
Confidence            555666688999999999999973

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.96  E-value=2e-31  Score=289.41  Aligned_cols=104  Identities=25%  Similarity=0.384  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHHHHHCC-----ceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc
Q psy5279         948 DAYCVTSVLDGLQYLHWRG-----LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA 1022 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~g-----IVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~ 1022 (1310)
                      ...++.||+.||.|||++|     |+||||||+|||++.  +..+||+|||++......... .....|++.|+|||++.
T Consensus       113 ~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~--~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~  189 (279)
T 2w5a_A          113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG--KQNVKLGDFGLARILNHDTSF-AKTFVGTPYYMSPEQMN  189 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECS--SSCEEECCCCHHHHC---CHH-HHHHHSCCTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcC--CCCEEEecCchheeecccccc-ccccCCCccccChHHhc
Confidence            3456789999999999999     999999999999975  457999999998755432211 11224678999999999


Q ss_pred             CCCCCCccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1023 EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1023 ~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      +..++.++|||||||++|+|++|..||.+.+.
T Consensus       190 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  221 (279)
T 2w5a_A          190 RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ  221 (279)
T ss_dssp             CC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCCCCCcccCH
Confidence            99999999999999999999999999987643

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.96  E-value=5.2e-29  Score=277.40  Aligned_cols=162  Identities=24%  Similarity=0.399  Sum_probs=141.2

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC-CCCcceEEEEEEe--CCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLVRLHDSYET--KDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~--~~~lyL  257 (1310)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++...   ..+.+.+|+.+|+.|. ||||+++++++..  ....++
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l  110 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL  110 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence            357899999999999999999999999999999999643   3466889999999997 9999999999998  678999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      ||||+.+++|.+.+.   .+++.+++.++.||+.||+|||++||+||||||+|||++.++ ..+||+|||+|+.......
T Consensus       111 v~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~-~~~kl~Dfg~a~~~~~~~~  186 (330)
T 3nsz_A          111 VFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH-RKLRLIDWGLAEFYHPGQE  186 (330)
T ss_dssp             EEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT-TEEEECCCTTCEECCTTCC
T ss_pred             EEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCC-CEEEEEeCCCceEcCCCCc
Confidence            999999999988874   389999999999999999999999999999999999998543 4799999999998766555


Q ss_pred             CCCcccchHHHh
Q psy5279         338 LNPLEYDVRYVR  349 (1310)
Q Consensus       338 l~~~~~t~~yv~  349 (1310)
                      ....++|+.|.+
T Consensus       187 ~~~~~~~~~y~a  198 (330)
T 3nsz_A          187 YNVRVASRYFKG  198 (330)
T ss_dssp             CCSCCSCGGGCC
T ss_pred             cccccccccccC
Confidence            555555555443

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.96  E-value=1.3e-29  Score=275.67  Aligned_cols=231  Identities=26%  Similarity=0.474  Sum_probs=171.9

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc------chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN------QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~------~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~  254 (1310)
                      +.++|++.+.||+|+||.||+|.++.+|+.||+|++.....      ...+.+.+|+.+|++++||||+++++++...+.
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   82 (283)
T 3bhy_A            3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD   82 (283)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe
Confidence            44679999999999999999999999999999999975422      236778999999999999999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC--CCeEEEEeeccceee
Q psy5279         255 FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG--GRHLLLTDFGLSRRI  332 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~--~~~VKLsDFGLAr~i  332 (1310)
                      +++||||+++++|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++.++  ...+||+|||+++..
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~  162 (283)
T 3bhy_A           83 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI  162 (283)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred             EEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence            999999999999999998777899999999999999999999999999999999999997654  237999999999987


Q ss_pred             cCCCCCCCcccchHHHhhh-------------------------cCCCccccCCCCCC----CCCCCcchhhhhhhcccc
Q psy5279         333 TSFGKLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKPT----EDTPKLNTDALRNYYNLY  383 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~----~~~p~~~~~~~~~~~~~~  383 (1310)
                      ..........+|+.|.++.                         ...||.........    .................+
T Consensus       163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (283)
T 3bhy_A          163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELA  242 (283)
T ss_dssp             C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHH
T ss_pred             cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHH
Confidence            6544444445555544332                         22233211000000    000001111112223334


Q ss_pred             hhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         384 KDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       384 ~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      .+++...+..+...|+++.+++.|||..
T Consensus       243 ~~li~~~l~~dp~~Rps~~~~l~h~~~~  270 (283)
T 3bhy_A          243 KDFIRRLLVKDPKRRMTIAQSLEHSWIK  270 (283)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHCHHHH
T ss_pred             HHHHHHHccCCHhHCcCHHHHHhCHHHH
Confidence            5566666667789999999999999964

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.96  E-value=2.3e-29  Score=280.30  Aligned_cols=171  Identities=23%  Similarity=0.374  Sum_probs=146.0

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC--eEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD--SFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~--~ly  256 (1310)
                      .+.++|.+.+.||+|+||.||+|.++.+|+.||||++.... ....+.+.+|+.+|++++|||||++++++...+  .+|
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   85 (319)
T 4euu_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV   85 (319)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred             CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence            45688999999999999999999999999999999997543 234566789999999999999999999998766  789


Q ss_pred             EEEecCCCCchHHHhhhcC---CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeec--CCCCeEEEEeecccee
Q psy5279         257 IISELAGGGELLHSLTRQS---YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH--PGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~---~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~--~~~~~VKLsDFGLAr~  331 (1310)
                      |||||++||+|.+.+....   .+++.++..++.||+.||.|||++||+||||||+|||+..  ++...+||+|||+|+.
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (319)
T ss_dssp             EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred             EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence            9999999999999987543   2999999999999999999999999999999999999831  2234799999999998


Q ss_pred             ecCCCCCCCcccchHHHhh
Q psy5279         332 ITSFGKLNPLEYDVRYVRQ  350 (1310)
Q Consensus       332 i~~~~~l~~~~~t~~yv~~  350 (1310)
                      ..........++|+.|+++
T Consensus       166 ~~~~~~~~~~~gt~~y~aP  184 (319)
T 4euu_A          166 LEDDEQFVSLYGTEEYLHP  184 (319)
T ss_dssp             CCTTCCBCCCCSCGGGCCH
T ss_pred             cCCCCceeecccCCCccCH
Confidence            8766655556666666543

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.96  E-value=1.7e-30  Score=291.57  Aligned_cols=158  Identities=22%  Similarity=0.340  Sum_probs=127.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++........ ......||+.|+|||++.+..++.
T Consensus       144 ~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  220 (321)
T 2c30_A          144 ATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL--DGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYAT  220 (321)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCc
Confidence            345679999999999999999999999999975  45799999999876643322 123346789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      ++|||||||++|+|++|..||.+.+..+....+.............+++++++|+.+|+. ++.+|+++.++++|+|+..
T Consensus       221 ~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~  300 (321)
T 2c30_A          221 EVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQ  300 (321)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGG
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcc
Confidence            999999999999999999999988877666555433222212235678999999999886 6678999999999999864


Q ss_pred             cc
Q psy5279        1108 KD 1109 (1310)
Q Consensus      1108 ~~ 1109 (1310)
                      ..
T Consensus       301 ~~  302 (321)
T 2c30_A          301 TG  302 (321)
T ss_dssp             CC
T ss_pred             CC
Confidence            33

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.96  E-value=6.6e-29  Score=272.20  Aligned_cols=168  Identities=29%  Similarity=0.506  Sum_probs=148.1

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---------chHHHHHHHHHHHHhcC-CCCcceEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---------QYKSLFKNELDIMNQLC-HRNLVRLHDSY  249 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---------~~~~~~~rEI~IL~~L~-HPNIVkL~d~f  249 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||||++.....         ...+.+.+|+.+|+++. ||||+++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            577899999999999999999999999999999999975431         22456789999999995 99999999999


Q ss_pred             EeCCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         250 ETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       250 ~~~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                      ...+.+|+||||++||+|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||++
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~  171 (298)
T 1phk_A           94 ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM--NIKLTDFGFS  171 (298)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC--CEEECCCTTC
T ss_pred             ccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCC--cEEEecccch
Confidence            99999999999999999999998877899999999999999999999999999999999999998655  7999999999


Q ss_pred             eeecCCCCCCCcccchHHHh
Q psy5279         330 RRITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       330 r~i~~~~~l~~~~~t~~yv~  349 (1310)
                      +.+.........++|+.|.+
T Consensus       172 ~~~~~~~~~~~~~~~~~y~a  191 (298)
T 1phk_A          172 CQLDPGEKLREVCGTPSYLA  191 (298)
T ss_dssp             EECCTTCCBCCCCSCGGGCC
T ss_pred             hhcCCCcccccccCCccccC
Confidence            98776555555566665544

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.96  E-value=7.3e-31  Score=291.14  Aligned_cols=168  Identities=18%  Similarity=0.328  Sum_probs=114.9

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      .++.||+.||.|||++||+||||||+|||++.   ..+||+|||+++....... .......|++.|+|||++.+.....
T Consensus       131 ~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  207 (313)
T 3cek_A          131 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR  207 (313)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET---TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC---
T ss_pred             HHHHHHHHHHHHHHHCCceecCCCcccEEEEC---CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhccccc
Confidence            35679999999999999999999999999963   6799999999876543221 1112335678999999865321000


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCccccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVK 1108 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~ 1108 (1310)
                                                                                                      
T Consensus       208 --------------------------------------------------------------------------------  207 (313)
T 3cek_A          208 --------------------------------------------------------------------------------  207 (313)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChh-hhhhc
Q psy5279        1109 DLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP-ETRQN 1187 (1310)
Q Consensus      1109 ~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~-e~~~~ 1187 (1310)
                                                          ........++.++||||+||++|+|++|..||...... .....
T Consensus       208 ------------------------------------~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  251 (313)
T 3cek_A          208 ------------------------------------ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA  251 (313)
T ss_dssp             -------------------------------------------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH
T ss_pred             ------------------------------------ccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH
Confidence                                                00000123677899999999999999999999765432 23333


Q ss_pred             ccccccccccchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCCch
Q psy5279        1188 VNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSE 1237 (1310)
Q Consensus      1188 I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~~~ 1237 (1310)
                      +....... .+....+++.++||.+||..||.+|||++|+|+||||....
T Consensus       252 ~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          252 IIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             HHCTTSCC-CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             HHhccccc-CCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence            33222221 12345689999999999999999999999999999996544

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.96  E-value=6.7e-30  Score=311.35  Aligned_cols=198  Identities=25%  Similarity=0.406  Sum_probs=164.0

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ..++|++.+.||+|+||.||+|.++.+|+.||||++.+..   ......+.+|+.+|+.++|||||+++++|.+.+.+||
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            4477999999999999999999999999999999997532   2234567899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         258 ISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |||||+||+|.+.+...+  .+++..++.++.||+.||+|||++|||||||||+|||++.++  ++||+|||+|+.+...
T Consensus       262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g--~vKL~DFGla~~~~~~  339 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG--HIRISDLGLAVHVPEG  339 (576)
T ss_dssp             EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS--CEEECCCTTCEECCTT
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCC--CeEEEecccceecccC
Confidence            999999999999987654  399999999999999999999999999999999999998665  8999999999988766


Q ss_pred             CCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhh--chhhhhhhcccCCCCC
Q psy5279         336 GKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDW--YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~--~~~~~l~~~~~r~~~~  402 (1310)
                      ......+||+.|++     |++..+                 ..++...||  .|..+...++.+.|..
T Consensus       340 ~~~~~~~GT~~Y~A-----PEvl~~-----------------~~~~~~~DiwSLGvilyeLltG~~PF~  386 (576)
T 2acx_A          340 QTIKGRVGTVGYMA-----PEVVKN-----------------ERYTFSPDWWALGCLLYEMIAGQSPFQ  386 (576)
T ss_dssp             CCEECCCSCGGGCC-----HHHHTT-----------------CEESSHHHHHHHHHHHHHHHHSSCSSS
T ss_pred             ccccccCCCccccC-----HHHHcC-----------------CCCCccchHHHHHHHHHHHHhCCCCCc
Confidence            55566788877764     444311                 124556785  4556666666665543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.96  E-value=2.2e-31  Score=295.91  Aligned_cols=158  Identities=17%  Similarity=0.318  Sum_probs=119.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||+++........  ......||+.|+|||++.+..+
T Consensus       119 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  196 (311)
T 3ork_A          119 IEVIADACQALNFSHQNGIIHRDVKPANIMISA--TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV  196 (311)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET--TSCEEECCCSCC------------------CCTTCCHHHHHTCCC
T ss_pred             HHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcC--CCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCC
Confidence            345679999999999999999999999999985  456999999998765432221  1222357899999999999999


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccccccc-ccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCc
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEF 1104 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~-~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f 1104 (1310)
                      +.++|||||||++|+|++|..||.+.+..+....+.......+ .....+++++.+++.+|+. ++.+|++..+.+.|+|
T Consensus       197 ~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l  276 (311)
T 3ork_A          197 DARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL  276 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred             CchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHH
Confidence            9999999999999999999999999887766544433332222 2345689999999999886 5567889999999998


Q ss_pred             cccc
Q psy5279        1105 WHVK 1108 (1310)
Q Consensus      1105 ~~~~ 1108 (1310)
                      +...
T Consensus       277 ~~~~  280 (311)
T 3ork_A          277 VRVH  280 (311)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            7643

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.96  E-value=5.6e-29  Score=269.01  Aligned_cols=224  Identities=21%  Similarity=0.313  Sum_probs=168.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~ly  256 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||+|++....  ......+.+|+.++..+ +||||+++++++.+++.++
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~   87 (289)
T 1x8b_A            8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML   87 (289)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred             cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence            45678999999999999999999999999999999997542  23455678999999999 9999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhc----CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC---------------
Q psy5279         257 IISELAGGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG---------------  317 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~----~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~---------------  317 (1310)
                      +||||++||+|.+.+...    ..+++.++..++.||+.||.|||++||+||||||+|||++.++               
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~  167 (289)
T 1x8b_A           88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA  167 (289)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC------------------
T ss_pred             EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence            999999999999998754    5699999999999999999999999999999999999997432               


Q ss_pred             --CCeEEEEeeccceeecCCCCCCCcccchHHHhhhcCC---Cc--------------cccCCCCCCCCCCCcchhhhh-
Q psy5279         318 --GRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALRH---PW--------------LNFADRKPTEDTPKLNTDALR-  377 (1310)
Q Consensus       318 --~~~VKLsDFGLAr~i~~~~~l~~~~~t~~yv~~~~r~---P~--------------l~~~~~~~~~~~p~~~~~~~~-  377 (1310)
                        ...+||+|||+++......   ..++|+.|+++....   +.              ..+ ...+.    ....+... 
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~~~~~----~~~~~~~~~  239 (289)
T 1x8b_A          168 SNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAA-GAEPL----PRNGDQWHE  239 (289)
T ss_dssp             --CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHT-TCCCC----CSSSHHHHH
T ss_pred             CCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHh-cCCCC----CcchhHHHH
Confidence              3479999999998875432   223555554432110   00              000 01110    01111110 


Q ss_pred             -----------hhcccchhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         378 -----------NYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       378 -----------~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                                 .+...+.+++...+-.+...|+++.+++.|||..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~  284 (289)
T 1x8b_A          240 IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL  284 (289)
T ss_dssp             HHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC-
T ss_pred             HHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhh
Confidence                       1122335556666667789999999999999974

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=6.5e-30  Score=286.37  Aligned_cols=234  Identities=24%  Similarity=0.362  Sum_probs=168.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC-----CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-----GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~-----~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~  254 (1310)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++...     .....+.+.+|+.+|+.++|||||+++++|.+.+.
T Consensus        23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  102 (345)
T 3hko_A           23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY  102 (345)
T ss_dssp             HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe
Confidence            4567899999999999999999999999999999999643     23445678899999999999999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhh----------------------------------------cCCCCHHHHHHHHHHHHHHHH
Q psy5279         255 FTIISELAGGGELLHSLTR----------------------------------------QSYYTEYDIAHYIRQLLSGLD  294 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~----------------------------------------~~~lsE~~i~~ii~QIl~GL~  294 (1310)
                      +++|||||+||+|.+.+..                                        ...+++..+..++.||+.||+
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~  182 (345)
T 3hko_A          103 ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH  182 (345)
T ss_dssp             EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence            9999999999999998842                                        111467788999999999999


Q ss_pred             HhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-----CCCCcccchHHHhhhc-----------------
Q psy5279         295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-----KLNPLEYDVRYVRQAL-----------------  352 (1310)
Q Consensus       295 YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-----~l~~~~~t~~yv~~~~-----------------  352 (1310)
                      |||++||+||||||+|||++.++...+||+|||+|+.+....     .....++|+.|+++..                 
T Consensus       183 ~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl  262 (345)
T 3hko_A          183 YLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA  262 (345)
T ss_dssp             HHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred             HHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence            999999999999999999986655589999999999764322     1233455655544321                 


Q ss_pred             ----------CCCccccCCCCCC----CCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcceec
Q psy5279         353 ----------RHPWLNFADRKPT----EDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMIY  413 (1310)
Q Consensus       353 ----------r~P~l~~~~~~~~----~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~~  413 (1310)
                                +.||-........    .............+...+.+.+...+..+...|+++.+++.|||....
T Consensus       263 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~  337 (345)
T 3hko_A          263 GVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQF  337 (345)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTT
T ss_pred             HHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccC
Confidence                      1122110000000    000000001111122334555556666678899999999999997543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.96  E-value=1.5e-29  Score=284.12  Aligned_cols=153  Identities=24%  Similarity=0.390  Sum_probs=133.2

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ...++|++.+.||+|+||.||+|.+..+|+.||||++.....  .....+.+|+.+|+.++|||||++++++.+++.+||
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  110 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL  110 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence            345789999999999999999999999999999999975432  234457799999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC---CCeEEEEeeccceeec
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG---GRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~---~~~VKLsDFGLAr~i~  333 (1310)
                      ||||+.| +|.+.+.....+++..++.++.||+.||+|||++||+||||||+|||++.++   ...+||+|||+|+...
T Consensus       111 v~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~  188 (329)
T 3gbz_A          111 IFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG  188 (329)
T ss_dssp             EEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred             EEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence            9999985 9999998888899999999999999999999999999999999999996432   2469999999998764

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.96  E-value=6.2e-29  Score=270.21  Aligned_cols=230  Identities=23%  Similarity=0.308  Sum_probs=164.0

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ..++|++.+.||+|+||.||+|.+..+|+.||+|++....   ......+.+|+.+++.++||||+++++++.+.+.+|+
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL   88 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred             ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence            3467999999999999999999999999999999996432   1234668899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         258 ISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      ||||+++++|.+.+... ..+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++......
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~--~~kl~dfg~~~~~~~~~  166 (278)
T 3cok_A           89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNM--NIKIADFGLATQLKMPH  166 (278)
T ss_dssp             EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTC--CEEECCCTTCEECC---
T ss_pred             EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--CEEEEeecceeeccCCC
Confidence            99999999999998765 5699999999999999999999999999999999999998655  79999999998765322


Q ss_pred             -CCCCcccchHHHhh-------------------------hcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhh
Q psy5279         337 -KLNPLEYDVRYVRQ-------------------------ALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNA  390 (1310)
Q Consensus       337 -~l~~~~~t~~yv~~-------------------------~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~  390 (1310)
                       .....++|+.|.++                         ....||-..................-..+...+.+.+...
T Consensus       167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  246 (278)
T 3cok_A          167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQL  246 (278)
T ss_dssp             -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHHHHHHHHHH
T ss_pred             CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHHHHHHHHHH
Confidence             12223444444332                         2233332211100000000000000001122335555666


Q ss_pred             hhhhcccCCCCCCccCCCccee
Q psy5279         391 AVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       391 ~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      +..+...|+++++++.|||...
T Consensus       247 l~~dp~~Rps~~~~l~h~~~~~  268 (278)
T 3cok_A          247 LRRNPADRLSLSSVLDHPFMSR  268 (278)
T ss_dssp             SCSSGGGSCCHHHHTTSTTTC-
T ss_pred             cccCHhhCCCHHHHhcCccccC
Confidence            6677889999999999999743

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.96  E-value=5.7e-30  Score=317.02  Aligned_cols=254  Identities=16%  Similarity=0.271  Sum_probs=188.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .++|++.+.||+|+||+||+|.++.+|+.||||++.+..   ....+.+.+|..+|..+ +||||++++++|.+.+.+||
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            467999999999999999999999999999999997531   23345677899999987 79999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~  336 (1310)
                      ||||++||+|...+...+.+++..++.|+.||+.||+|||++|||||||||+||||+.++  ++||+|||+|+.... ..
T Consensus       420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g--~ikL~DFGla~~~~~~~~  497 (674)
T 3pfq_A          420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG--HIKIADFGMCKENIWDGV  497 (674)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSS--CEEECCCTTCEECCCTTC
T ss_pred             EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCC--cEEEeecceeeccccCCc
Confidence            999999999999998888899999999999999999999999999999999999998765  899999999997533 33


Q ss_pred             CCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhh--chhhhhhhcccCCCCCCccCCCcceecC
Q psy5279         337 KLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDW--YGNAAVRRYYRRRPLNSCYTHPSRMIYP  414 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~--~~~~~l~~~~~r~~~~~cl~hpw~~~~~  414 (1310)
                      ...+.+||+.|+     +|++..+                 .-|+...||  +|..+...++.++|...           
T Consensus       498 ~~~~~~GT~~Y~-----APE~l~~-----------------~~~~~~~DvwSlGvilyelltG~~Pf~~-----------  544 (674)
T 3pfq_A          498 TTKTFCGTPDYI-----APEIIAY-----------------QPYGKSVDWWAFGVLLYEMLAGQAPFEG-----------  544 (674)
T ss_dssp             CBCCCCSCSSSC-----CHHHHTC-----------------CCBSTHHHHHHHHHHHHHHHHSSCSSCC-----------
T ss_pred             ccccccCCCccc-----CHhhhcC-----------------CCCCccceEechHHHHHHHHcCCCCCCC-----------
Confidence            455678887665     4554311                 124456785  55566666666665433           


Q ss_pred             CCCCCCCCCCCcceecccccccccccccccCCCCCCCcccc-cCCCCCCCCc--hhhHHHHhccCCCH
Q psy5279         415 PGTQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWE-DNVPNRGPGG--ELLHSLTRQSYYTE  479 (1310)
Q Consensus       415 ~~~~~tp~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~~~-d~v~e~~~~~--el~~~~~~~~~~~e  479 (1310)
                          .+...+...| +.....    ....++..+.++|..+ ..+|+.++|.  +...-|+++..|..
T Consensus       545 ----~~~~~~~~~i-~~~~~~----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~  603 (674)
T 3pfq_A          545 ----EDEDELFQSI-MEHNVA----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  603 (674)
T ss_dssp             ----SSHHHHHHHH-HSSCCC----CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred             ----CCHHHHHHHH-HhCCCC----CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccC
Confidence                1111010111 111000    1122233334445444 7788888875  56677777777654

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.96  E-value=3.1e-29  Score=282.90  Aligned_cols=166  Identities=26%  Similarity=0.401  Sum_probs=138.0

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEe-------
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYET-------  251 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~-------  251 (1310)
                      ..++|++.+.||+|+||.||+|.++.+|+.||||++.....  .....+.+|+.+|+.++||||+++++++..       
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   94 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR   94 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred             cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence            34789999999999999999999999999999999865432  334567899999999999999999999987       


Q ss_pred             -CCeEEEEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         252 -KDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       252 -~~~lyLVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                       .+.+|+|||||.| +|...+... ..+++.+++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|
T Consensus        95 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~a  171 (351)
T 3mi9_A           95 CKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLA  171 (351)
T ss_dssp             --CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEEECCCTTC
T ss_pred             CCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC--CEEEccchhc
Confidence             4568999999986 666666543 5699999999999999999999999999999999999998665  8999999999


Q ss_pred             eeecCC-----CCCCCcccchHHHh
Q psy5279         330 RRITSF-----GKLNPLEYDVRYVR  349 (1310)
Q Consensus       330 r~i~~~-----~~l~~~~~t~~yv~  349 (1310)
                      +.+...     ......++|+.|++
T Consensus       172 ~~~~~~~~~~~~~~~~~~gt~~y~a  196 (351)
T 3mi9_A          172 RAFSLAKNSQPNRYTNRVVTLWYRP  196 (351)
T ss_dssp             EECCCCSSSSCCCCCSSCSCGGGCC
T ss_pred             ccccccccccccccCCcccccCccC
Confidence            987532     22233455555544

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.96  E-value=2.6e-29  Score=275.95  Aligned_cols=147  Identities=29%  Similarity=0.465  Sum_probs=131.8

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|++.+.||+|+||.||+|.+ .+|+.||+|++.....  .....+.+|+.+|+.++|||||++++++.+.+.+|+|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence            5799999999999999999998 7899999999965432  234678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         261 LAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       261 y~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |+.+ +|.+.+... +.+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+...
T Consensus        81 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~  151 (288)
T 1ob3_A           81 HLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG--ELKIADFGLARAFG  151 (288)
T ss_dssp             CCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--CEEECCTTHHHHHC
T ss_pred             ecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--CEEEeECccccccC
Confidence            9986 888877654 5699999999999999999999999999999999999998655  79999999998754

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.96  E-value=1.2e-29  Score=282.94  Aligned_cols=231  Identities=21%  Similarity=0.316  Sum_probs=168.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--------chHHHHHHHHHHHHhcCCCCcceEEEEEEe
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--------QYKSLFKNELDIMNQLCHRNLVRLHDSYET  251 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--------~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~  251 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||||++.....        .....+.+|+.+|++++||||+++++++..
T Consensus         7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   86 (322)
T 2ycf_A            7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA   86 (322)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred             hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence            456789999999999999999999999999999999965321        122347899999999999999999999987


Q ss_pred             CCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccce
Q psy5279         252 KDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSR  330 (1310)
Q Consensus       252 ~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr  330 (1310)
                      ++ +|+||||++||+|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++ ...+||+|||+++
T Consensus        87 ~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  165 (322)
T 2ycf_A           87 ED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  165 (322)
T ss_dssp             SS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred             Cc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence            65 899999999999999998878899999999999999999999999999999999999998654 2359999999999


Q ss_pred             eecCCCCCCCcccchHHHh----------------------------hhcCCCccccCCCCCCC-----CCCCcchhhhh
Q psy5279         331 RITSFGKLNPLEYDVRYVR----------------------------QALRHPWLNFADRKPTE-----DTPKLNTDALR  377 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~----------------------------~~~r~P~l~~~~~~~~~-----~~p~~~~~~~~  377 (1310)
                      ...........++|+.|.+                            ..+..||-.........     ......++...
T Consensus       166 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (322)
T 2ycf_A          166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA  245 (322)
T ss_dssp             ECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHT
T ss_pred             ecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhh
Confidence            8754322222223322222                            22333442211110000     00001111112


Q ss_pred             hhcccchhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         378 NYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       378 ~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      .+...+.+++...+..+...|+++.+++.|||+.
T Consensus       246 ~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~  279 (322)
T 2ycf_A          246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ  279 (322)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGC
T ss_pred             hcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcC
Confidence            2333445666666667789999999999999963

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.96  E-value=1.1e-28  Score=276.91  Aligned_cols=224  Identities=25%  Similarity=0.357  Sum_probs=172.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecC
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA  262 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~  262 (1310)
                      ..|+..+.||+|+||.||+|.++.+|+.||||++........+.+.+|+.+|+.++|||||+++++|...+.+|+||||+
T Consensus        45 ~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  124 (321)
T 2c30_A           45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL  124 (321)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecC
Confidence            34788889999999999999999999999999998766666777899999999999999999999999999999999999


Q ss_pred             CCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CCCCc
Q psy5279         263 GGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KLNPL  341 (1310)
Q Consensus       263 ~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l~~~  341 (1310)
                      +||+|.+.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.+.... .....
T Consensus       125 ~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~~~~~~~~~~~~~~~  201 (321)
T 2c30_A          125 QGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG--RVKLSDFGFCAQISKDVPKRKSL  201 (321)
T ss_dssp             CSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEECCCTTCEECCSSSCCBCCC
T ss_pred             CCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--cEEEeeeeeeeecccCccccccc
Confidence            99999998764 4699999999999999999999999999999999999998655  79999999998875432 23445


Q ss_pred             ccchHHHhhh-------------------------cCCCccccCCCCC-----CCCCCCcchhhhhhhcccchhhchhhh
Q psy5279         342 EYDVRYVRQA-------------------------LRHPWLNFADRKP-----TEDTPKLNTDALRNYYNLYKDWYGNAA  391 (1310)
Q Consensus       342 ~~t~~yv~~~-------------------------~r~P~l~~~~~~~-----~~~~p~~~~~~~~~~~~~~~D~~~~~~  391 (1310)
                      ++|+.|+++.                         ++.||........     ....+..  .....+...+.+++...+
T Consensus       202 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l  279 (321)
T 2c30_A          202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKL--KNSHKVSPVLRDFLERML  279 (321)
T ss_dssp             CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCC--TTGGGSCHHHHHHHHHHS
T ss_pred             cCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCc--CccccCCHHHHHHHHHHc
Confidence            6666665432                         2222211000000     0000000  000112233456666666


Q ss_pred             hhhcccCCCCCCccCCCcce
Q psy5279         392 VRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       392 l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ..+...|+++.+++.|||..
T Consensus       280 ~~dp~~Rps~~ell~hp~~~  299 (321)
T 2c30_A          280 VRDPQERATAQELLDHPFLL  299 (321)
T ss_dssp             CSSTTTSCCHHHHHTSGGGG
T ss_pred             cCChhhCcCHHHHhcChhhc
Confidence            67788999999999999974

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.96  E-value=6.7e-29  Score=268.72  Aligned_cols=230  Identities=23%  Similarity=0.302  Sum_probs=173.1

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ++.++|++.+.||+|+||.||+|.++.+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..|+|
T Consensus         4 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (276)
T 2yex_A            4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   83 (276)
T ss_dssp             HHHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ceecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence            35578999999999999999999999999999999997543 33456788999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC--
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG--  336 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~--  336 (1310)
                      |||++||+|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.+....  
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~~~~~~~~  161 (276)
T 2yex_A           84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRE  161 (276)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC--CEEECCCTTCEECEETTEE
T ss_pred             EEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCC--CEEEeeCCCccccCCCcch
Confidence            99999999999998777799999999999999999999999999999999999998655  79999999998764322  


Q ss_pred             -CCCCcccchHHHhhh--------------------------cCCCccccCCCCCCC---CCCCcchhhhhhhcccchhh
Q psy5279         337 -KLNPLEYDVRYVRQA--------------------------LRHPWLNFADRKPTE---DTPKLNTDALRNYYNLYKDW  386 (1310)
Q Consensus       337 -~l~~~~~t~~yv~~~--------------------------~r~P~l~~~~~~~~~---~~p~~~~~~~~~~~~~~~D~  386 (1310)
                       .....++|+.|.++.                          +..||-.........   ............+...+.+.
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  241 (276)
T 2yex_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL  241 (276)
T ss_dssp             CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred             hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHH
Confidence             223344454443322                          222332111100000   00000000111223334555


Q ss_pred             chhhhhhhcccCCCCCCccCCCcce
Q psy5279         387 YGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       387 ~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +...+..+...|+++++++.|||..
T Consensus       242 i~~~l~~~p~~Rps~~~il~~~~~~  266 (276)
T 2yex_A          242 LHKILVENPSARITIPDIKKDRWYN  266 (276)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTCTTTT
T ss_pred             HHHHCCCCchhCCCHHHHhcCcccc
Confidence            6666667788999999999999963

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=5.3e-29  Score=285.76  Aligned_cols=161  Identities=29%  Similarity=0.427  Sum_probs=131.6

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--------
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--------  252 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--------  252 (1310)
                      ..++|++.+.||+|+||+||+|.+..+|+.||||++.....    ...+|+.+|+.|+|||||+++++|...        
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~   80 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP   80 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence            45789999999999999999999999999999999865422    223799999999999999999999543        


Q ss_pred             ------------------------------CeEEEEEecCCCCchHHHh----hhcCCCCHHHHHHHHHHHHHHHHHhhh
Q psy5279         253 ------------------------------DSFTIISELAGGGELLHSL----TRQSYYTEYDIAHYIRQLLSGLDYMHR  298 (1310)
Q Consensus       253 ------------------------------~~lyLVmEy~~GGeL~~~l----~~~~~lsE~~i~~ii~QIl~GL~YLHs  298 (1310)
                                                    ..+++|||||+| +|.+.+    .....+++..++.++.||+.||.|||+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  159 (383)
T 3eb0_A           81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS  159 (383)
T ss_dssp             -----------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence                                          348999999995 555444    345679999999999999999999999


Q ss_pred             CCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCCCcccchHH
Q psy5279         299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRY  347 (1310)
Q Consensus       299 ~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~~~~~t~~y  347 (1310)
                      +||+||||||+|||++.++ ..+||+|||+|+...........++|+.|
T Consensus       160 ~gi~H~Dikp~Nil~~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y  207 (383)
T 3eb0_A          160 LGICHRDIKPQNLLVNSKD-NTLKLCDFGSAKKLIPSEPSVAYICSRFY  207 (383)
T ss_dssp             TTEECSCCCGGGEEEETTT-TEEEECCCTTCEECCTTSCCCCCCCCSSC
T ss_pred             CcCccCccCHHHEEEcCCC-CcEEEEECCCCcccCCCCCCcCcccCCCc
Confidence            9999999999999997432 48999999999987655444444444433

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.96  E-value=8.7e-31  Score=293.14  Aligned_cols=99  Identities=23%  Similarity=0.357  Sum_probs=81.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCC-C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI-F 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~y-s 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++. ....+||+|||+++......   .....||+.|+|||++.+..+ +
T Consensus       152 ~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~-~~~~~kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~  227 (320)
T 3a99_A          152 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL-NRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHG  227 (320)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET-TTTEEEECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCH
T ss_pred             HHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC-CCCCEEEeeCcccccccccc---ccCCCCCccCCChHHhccCCCCC
Confidence            345679999999999999999999999999973 24579999999987654321   223457899999999987766 5


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      .++|||||||++|+|++|..||.+
T Consensus       228 ~~~Di~slG~il~el~~g~~pf~~  251 (320)
T 3a99_A          228 RSAAVWSLGILLYDMVCGDIPFEH  251 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             ccchHHhHHHHHHHHHHCCCCCCC
Confidence            778999999999999999999853

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.96  E-value=1.1e-30  Score=288.99  Aligned_cols=154  Identities=18%  Similarity=0.309  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++..............||+.|+|||++.+..++.
T Consensus       114 ~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  191 (294)
T 4eqm_A          114 INFTNQILDGIKHAHDMRIVHRDIKPQNILIDS--NKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE  191 (294)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCT
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCc
Confidence            345679999999999999999999999999975  457999999998765433222223345789999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc-ccc-cccchhccHHHHHHHHHhccC-CcchhcHHhhhCCCc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR-YRF-EYLFKELTQEATRFLMLIFKH-EVDWITLANNIDHEF 1104 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~-~~f-~~~~~~lS~eakdLL~~il~~-~~~rit~~e~L~H~f 1104 (1310)
                      ++|||||||++|+|++|..||.+.+............ ... ......+++...+++.+++.. +.+|++..+.+.+.+
T Consensus       192 ~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l  270 (294)
T 4eqm_A          192 CTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDL  270 (294)
T ss_dssp             THHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHH
T ss_pred             hHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHH
Confidence            9999999999999999999999987765543322221 112 123456889999999998874 556776666666654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.96  E-value=9.2e-29  Score=273.56  Aligned_cols=200  Identities=22%  Similarity=0.322  Sum_probs=158.2

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++.....   ...+.+.+|+.+|++++||||+++++++...+.+|
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~   87 (294)
T 4eqm_A            8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYY   87 (294)
T ss_dssp             CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEE
T ss_pred             HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEE
Confidence            567899999999999999999999999999999999865322   33456889999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      +||||++||+|.+.+...+.+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+......
T Consensus        88 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~  165 (294)
T 4eqm_A           88 LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK--TLKIFDFGIAKALSETS  165 (294)
T ss_dssp             EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--CEEECCCSSSTTC----
T ss_pred             EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEEeCCCcccccccc
Confidence            9999999999999998888899999999999999999999999999999999999998655  79999999998765432


Q ss_pred             C--CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCC
Q psy5279         337 K--LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNS  403 (1310)
Q Consensus       337 ~--l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~  403 (1310)
                      .  ....++|+.|     .+|+...+.                 .++...| | .|..+...++.+.|...
T Consensus       166 ~~~~~~~~gt~~y-----~aPE~~~~~-----------------~~~~~~Di~slG~~l~~ll~g~~pf~~  214 (294)
T 4eqm_A          166 LTQTNHVLGTVQY-----FSPEQAKGE-----------------ATDECTDIYSIGIVLYEMLVGEPPFNG  214 (294)
T ss_dssp             ---------CCSS-----CCHHHHHTC-----------------CCCTTHHHHHHHHHHHHHHHSSCSSCS
T ss_pred             ccccCccccCccc-----cCHhHhcCC-----------------CCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            1  1223344333     344443211                 1233356 4 56667777777766543

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.96  E-value=7.1e-29  Score=283.95  Aligned_cols=169  Identities=28%  Similarity=0.482  Sum_probs=150.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--------chHHHHHHHHHHHHhc-CCCCcceEEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--------QYKSLFKNELDIMNQL-CHRNLVRLHDSYE  250 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--------~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~  250 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||||++.....        ...+.+.+|+.+|+++ +||||+++++++.
T Consensus        91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  170 (365)
T 2y7j_A           91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE  170 (365)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence            355789999999999999999999999999999999975431        1245678999999999 8999999999999


Q ss_pred             eCCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         251 TKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       251 ~~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      ..+..||||||++||+|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++
T Consensus       171 ~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~--~ikl~DfG~~~  248 (365)
T 2y7j_A          171 SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNM--QIRLSDFGFSC  248 (365)
T ss_dssp             BSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC--CEEECCCTTCE
T ss_pred             eCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--CEEEEecCccc
Confidence            9999999999999999999998777899999999999999999999999999999999999998655  79999999999


Q ss_pred             eecCCCCCCCcccchHHHhh
Q psy5279         331 RITSFGKLNPLEYDVRYVRQ  350 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~~  350 (1310)
                      .+.........++|+.|+++
T Consensus       249 ~~~~~~~~~~~~gt~~y~aP  268 (365)
T 2y7j_A          249 HLEPGEKLRELCGTPGYLAP  268 (365)
T ss_dssp             ECCTTCCBCCCCSCGGGCCH
T ss_pred             ccCCCcccccCCCCCCccCh
Confidence            88776666677888777654

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.96  E-value=3e-31  Score=297.09  Aligned_cols=92  Identities=24%  Similarity=0.286  Sum_probs=79.2

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchhh
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAV  673 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  673 (1310)
                      ..+.|+++..|.+|.||.|.+|..   ++..||.|++..+.....+...|...|++|+|+||..+++.+...........
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   98 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQL---LNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW   98 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEE---TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             chhhchhhheecccCceEEEEEEE---CCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence            347899999999999999999843   47899999998888777788889999999999999999999887665556678


Q ss_pred             HHHHhhcCchhhhhh
Q psy5279         674 LVMEKLQGADVLSYL  688 (1310)
Q Consensus       674 ~~~~~~~~~~~~~~~  688 (1310)
                      ||||+|.|.++..+|
T Consensus        99 lv~e~~~~g~L~~~l  113 (322)
T 3soc_A           99 LITAFHEKGSLSDFL  113 (322)
T ss_dssp             EEEECCTTCBHHHHH
T ss_pred             EEEecCCCCCHHHHH
Confidence            999999998877666

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.96  E-value=4.4e-29  Score=280.18  Aligned_cols=233  Identities=23%  Similarity=0.424  Sum_probs=170.5

Q ss_pred             ccCCCeeee-ceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeE
Q psy5279         180 PITDAYDFG-DELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       180 ~~~d~Y~i~-~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~l  255 (1310)
                      .+.++|.+. +.||+|+||.||+|.++.+|+.||+|++....  ......+.+|+.+|+.+ +||||++++++|...+.+
T Consensus        25 ~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~  104 (327)
T 3lm5_A           25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEI  104 (327)
T ss_dssp             HHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             hhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeE
Confidence            567888888 88999999999999999999999999997532  33466788999999999 569999999999999999


Q ss_pred             EEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccceee
Q psy5279         256 TIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRI  332 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr~i  332 (1310)
                      |+|||||.||+|.+.+...  ..+++.++..++.||+.||+|||++||+||||||+|||++... ...+||+|||+|+..
T Consensus       105 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~  184 (327)
T 3lm5_A          105 ILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI  184 (327)
T ss_dssp             EEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC
T ss_pred             EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCcccccc
Confidence            9999999999999988543  5699999999999999999999999999999999999998521 347999999999988


Q ss_pred             cCCCCCCCcccchHHHhhh-------------------------cCCCccccCCCCC----CCCCCCcchhhhhhhcccc
Q psy5279         333 TSFGKLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKP----TEDTPKLNTDALRNYYNLY  383 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~  383 (1310)
                      .........++|+.|+++.                         ++.||........    ..............+...+
T Consensus       185 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  264 (327)
T 3lm5_A          185 GHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLA  264 (327)
T ss_dssp             ---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred             CCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHH
Confidence            6655555556666655432                         2223211100000    0000000011111222334


Q ss_pred             hhhchhhhhhhcccCCCCCCccCCCccee
Q psy5279         384 KDWYGNAAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       384 ~D~~~~~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      .+++...+..+...|+++++++.|||...
T Consensus       265 ~~li~~~L~~dP~~Rpt~~~ll~h~~~~~  293 (327)
T 3lm5_A          265 TDFIQSLLVKNPEKRPTAEICLSHSWLQQ  293 (327)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHTTCGGGCC
T ss_pred             HHHHHHHcCCChhhCcCHHHHhCCHhhcc
Confidence            55666666677899999999999999743

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.96  E-value=2.1e-29  Score=305.15  Aligned_cols=198  Identities=22%  Similarity=0.324  Sum_probs=162.0

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      -.+.|++.+.||+|+||+||+|.++.+|+.||||++.+...   .....+.+|+.+|+.++|||||+++++|.+.+.+||
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  262 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL  262 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence            45789999999999999999999999999999999975321   234567899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhc----CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         258 ISELAGGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~----~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |||||+||+|...+...    ..+++..++.++.||+.||.|||++||+||||||+|||++.++  ++||+|||+|+.+.
T Consensus       263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g--~vkL~DFGla~~~~  340 (543)
T 3c4z_A          263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG--NVRISDLGLAVELK  340 (543)
T ss_dssp             EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS--CEEECCCTTCEECC
T ss_pred             EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCC--CEEEeecceeeecc
Confidence            99999999999988653    3599999999999999999999999999999999999998765  89999999999876


Q ss_pred             CCCC-CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhh--chhhhhhhcccCCCCC
Q psy5279         334 SFGK-LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDW--YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       334 ~~~~-l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~--~~~~~l~~~~~r~~~~  402 (1310)
                      .... ....+||+.|+     +|++..+.                 -++...||  .|+.+...++.+.|..
T Consensus       341 ~~~~~~~~~~GT~~Y~-----APE~l~~~-----------------~~~~~~DiwSlGvilyelltG~~PF~  390 (543)
T 3c4z_A          341 AGQTKTKGYAGTPGFM-----APELLLGE-----------------EYDFSVDYFALGVTLYEMIAARGPFR  390 (543)
T ss_dssp             TTCCCBCCCCSCTTTS-----CHHHHTTC-----------------CBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CCCcccccccCCcccc-----ChhhhcCC-----------------CCChHHhcCcchHHHHHHHhCCCCCC
Confidence            5433 34457777665     45543221                 14455785  4556666666665543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.96  E-value=1.8e-28  Score=277.18  Aligned_cols=166  Identities=25%  Similarity=0.423  Sum_probs=142.1

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC-----CCCcceEEEEEEeCCe
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-----HRNLVRLHDSYETKDS  254 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~-----HPNIVkL~d~f~~~~~  254 (1310)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||||++... ......+.+|+.+|+.+.     |||||+++++|...+.
T Consensus        32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~  110 (360)
T 3llt_A           32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH  110 (360)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE
T ss_pred             EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe
Confidence            5678999999999999999999999999999999999642 234456778999999997     9999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC----------------
Q psy5279         255 FTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP----------------  316 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~----------------  316 (1310)
                      ++|||||+ |++|.+.+....  .+++.+++.++.||+.||+|||++||+||||||+|||++.+                
T Consensus       111 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~  189 (360)
T 3llt_A          111 MCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGK  189 (360)
T ss_dssp             EEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCC
T ss_pred             eEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccc
Confidence            99999999 899999987654  49999999999999999999999999999999999999741                


Q ss_pred             -------CCCeEEEEeeccceeecCCCCCCCcccchHHHh
Q psy5279         317 -------GGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       317 -------~~~~VKLsDFGLAr~i~~~~~l~~~~~t~~yv~  349 (1310)
                             ....+||+|||+|+.....  ....++|+.|++
T Consensus       190 ~~~~~~~~~~~~kl~DFG~a~~~~~~--~~~~~gt~~y~a  227 (360)
T 3llt_A          190 KIQIYRTKSTGIKLIDFGCATFKSDY--HGSIINTRQYRA  227 (360)
T ss_dssp             EEEEEEESCCCEEECCCTTCEETTSC--CCSCCSCGGGCC
T ss_pred             cccccccCCCCEEEEeccCceecCCC--CcCccCcccccC
Confidence                   2357999999999875432  234455655544

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.96  E-value=2.4e-28  Score=270.61  Aligned_cols=151  Identities=23%  Similarity=0.415  Sum_probs=139.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .++|.+.+.||+|+||.||+|.++.+|+.||+|++........+.+.+|+.+|++++|||||++++++.+++.+++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            36799999999999999999999999999999998766556677899999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++||+|.+.+.. ...+++.++..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+....
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~  160 (310)
T 3s95_A           89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENK--NVVVADFGLARLMVD  160 (310)
T ss_dssp             CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTS--CEEECCCTTCEECC-
T ss_pred             cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCC--CEEEeecccceeccc
Confidence            999999999976 45699999999999999999999999999999999999998655  799999999998754

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=4.3e-29  Score=286.29  Aligned_cols=162  Identities=26%  Similarity=0.410  Sum_probs=132.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD----  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~----  253 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||||++....  ....+.+.+|+.+|+.++|||||++++++...+    
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~  101 (367)
T 1cm8_A           22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD  101 (367)
T ss_dssp             CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred             eecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence            46788999999999999999999999999999999986532  233556889999999999999999999998764    


Q ss_pred             --eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         254 --SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       254 --~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                        .+|+||||+ |++|.+.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus       102 ~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~  177 (367)
T 1cm8_A          102 FTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC--ELKILDFGLARQ  177 (367)
T ss_dssp             CCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC--CEEECCCTTCEE
T ss_pred             CceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCC--CEEEEeeecccc
Confidence              469999999 7889888765 5799999999999999999999999999999999999998655  799999999998


Q ss_pred             ecCCCCCCCcccchHH
Q psy5279         332 ITSFGKLNPLEYDVRY  347 (1310)
Q Consensus       332 i~~~~~l~~~~~t~~y  347 (1310)
                      ....  .+..++|+.|
T Consensus       178 ~~~~--~~~~~~t~~y  191 (367)
T 1cm8_A          178 ADSE--MTGYVVTRWY  191 (367)
T ss_dssp             CCSS--CCSSCSCGGG
T ss_pred             cccc--cCcCcCCCCc
Confidence            6432  3344544433

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.96  E-value=5.4e-29  Score=279.07  Aligned_cols=148  Identities=30%  Similarity=0.445  Sum_probs=129.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc-hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~-~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      ++|.+.+.||+|+||.||+|.++.+|+.||+|++...... ....+.+|+.+|+.++|||||++++++...+.+++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            5799999999999999999999999999999999653321 112345799999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +.| +|.+.+...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+...
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~a~~~~  151 (324)
T 3mtl_A           82 LDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERG--ELKLADFGLARAKS  151 (324)
T ss_dssp             CSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTC--CEEECSSSEEECC-
T ss_pred             ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCC--CEEEccCccccccc
Confidence            985 8888876644 499999999999999999999999999999999999998665  79999999998664

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.96  E-value=4.2e-29  Score=285.75  Aligned_cols=163  Identities=23%  Similarity=0.338  Sum_probs=129.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-----
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-----  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-----  253 (1310)
                      +.++|++.+.||+|+||.||+|.+..+|+.||||++....  ......+.+|+.+|+.++|||||+++++|...+     
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~  102 (371)
T 2xrw_A           23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  102 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred             hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence            4578999999999999999999999999999999997542  233456789999999999999999999998765     


Q ss_pred             -eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         254 -SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       254 -~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                       .+|+|||||.| +|.+.+.  ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+..
T Consensus       103 ~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~--~~kl~Dfg~a~~~  177 (371)
T 2xrw_A          103 QDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTA  177 (371)
T ss_dssp             CEEEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--CEEECCCCC----
T ss_pred             cceEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCC--CEEEEEeeccccc
Confidence             78999999985 6777775  3589999999999999999999999999999999999998655  7999999999877


Q ss_pred             cCCCCCCCcccchHHH
Q psy5279         333 TSFGKLNPLEYDVRYV  348 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv  348 (1310)
                      .......+.++|+.|+
T Consensus       178 ~~~~~~~~~~gt~~y~  193 (371)
T 2xrw_A          178 GTSFMMTPYVVTRYYR  193 (371)
T ss_dssp             ------------CTTC
T ss_pred             ccccccCCceecCCcc
Confidence            6544444445554443

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.96  E-value=1.4e-29  Score=281.45  Aligned_cols=154  Identities=23%  Similarity=0.343  Sum_probs=135.4

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe-
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS-  254 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~-  254 (1310)
                      ..+.++|++.+.||+|+||.||+|.++.+|+.||||++.....   .....+.+|+.++++++|||||++++++..... 
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   87 (311)
T 3ork_A            8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA   87 (311)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT
T ss_pred             ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC
Confidence            3678999999999999999999999999999999999976432   234568899999999999999999999887653 


Q ss_pred             ---EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         255 ---FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       255 ---lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                         .|+||||++||+|.+.+...+.+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus        88 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~a~~  165 (311)
T 3ork_A           88 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN--AVKVMDFGIARA  165 (311)
T ss_dssp             EEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTS--CEEECCCSCC--
T ss_pred             CcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCC--CEEEeeccCccc
Confidence               499999999999999998878899999999999999999999999999999999999998765  799999999987


Q ss_pred             ecC
Q psy5279         332 ITS  334 (1310)
Q Consensus       332 i~~  334 (1310)
                      +..
T Consensus       166 ~~~  168 (311)
T 3ork_A          166 IAD  168 (311)
T ss_dssp             ---
T ss_pred             ccc
Confidence            654

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.96  E-value=5.9e-30  Score=283.07  Aligned_cols=269  Identities=20%  Similarity=0.260  Sum_probs=194.5

Q ss_pred             ccccCCCccccCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhhchhhHHHHHH
Q psy5279         581 SVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLE  660 (1310)
Q Consensus       581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  660 (1310)
                      .++....+...+.+.+.|+.+..|.+|.||.|.+|..+. ++..||.|.+.... ....+..|+..|+.|+|++|..+++
T Consensus        14 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~   91 (314)
T 3com_A           14 QLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKE-TGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYG   91 (314)
T ss_dssp             ----------------CEEEEEECC----CEEEEEEETT-TCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             chhhcCchhhhhcchhhhhhheeeccCCCeEEEEEEECC-CCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEE
Confidence            344455556667788999999999999999999987655 78999999998654 4677889999999999999999998


Q ss_pred             hcCCCCcccchhhHHHHhhcCchhhhhhhccc-cchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhc
Q psy5279         661 AYKPSTTASNIAVLVMEKLQGADVLSYLSSRH-EYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSA  739 (1310)
Q Consensus       661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (1310)
                      .+...    +...+|||++.|.++..++..+. ..+                                            
T Consensus        92 ~~~~~----~~~~lv~e~~~~~~L~~~~~~~~~~~~--------------------------------------------  123 (314)
T 3com_A           92 SYFKN----TDLWIVMEYCGAGSVSDIIRLRNKTLT--------------------------------------------  123 (314)
T ss_dssp             EEEET----TEEEEEEECCTTEEHHHHHHHHTCCCC--------------------------------------------
T ss_pred             EEEeC----CEEEEEeecCCCCCHHHHHHhcCCCCC--------------------------------------------
Confidence            88654    55689999999887765553110 000                                            


Q ss_pred             ccccccccccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCC
Q psy5279         740 NTANLRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTS  819 (1310)
Q Consensus       740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  819 (1310)
                                                                                                      
T Consensus       124 --------------------------------------------------------------------------------  123 (314)
T 3com_A          124 --------------------------------------------------------------------------------  123 (314)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeec
Q psy5279         820 ENGHLDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREK  899 (1310)
Q Consensus       820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~  899 (1310)
                                                                                                      
T Consensus       124 --------------------------------------------------------------------------------  123 (314)
T 3com_A          124 --------------------------------------------------------------------------------  123 (314)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ceeeeeeeCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEE
Q psy5279         900 PITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVM  979 (1310)
Q Consensus       900 ~~~~~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl  979 (1310)
                                                                   ......++.||+.||.|||++||+||||||+|||+
T Consensus       124 ---------------------------------------------~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~  158 (314)
T 3com_A          124 ---------------------------------------------EDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL  158 (314)
T ss_dssp             ---------------------------------------------HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred             ---------------------------------------------HHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEE
Confidence                                                         01134457799999999999999999999999999


Q ss_pred             eecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279         980 ASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus       980 ~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      +.  ++.+||+|||++........ ......|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+......
T Consensus       159 ~~--~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~  235 (314)
T 3com_A          159 NT--EGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF  235 (314)
T ss_dssp             CT--TCCEEECCCTTCEECBTTBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred             CC--CCCEEEeecccchhhhhhcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence            75  45799999999976543221 1223457899999999999999999999999999999999999999877655443


Q ss_pred             hhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCcccc
Q psy5279        1060 NVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1060 ~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      .+.............++++..+||.+|+. ++.+|+++.+++.|+|+..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~  284 (314)
T 3com_A          236 MIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRS  284 (314)
T ss_dssp             HHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHT
T ss_pred             HHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhc
Confidence            33222111111234578899999999886 6678999999999999864

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.96  E-value=2.3e-30  Score=286.62  Aligned_cols=97  Identities=26%  Similarity=0.430  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC-C
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF-P 1028 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys-~ 1028 (1310)
                      .++.||+.||.|||++||+||||||+|||++. .+..+||+|||++.......   .....|++.|+|||++.+..+. .
T Consensus       143 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~-~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~  218 (312)
T 2iwi_A          143 CFFGQVVAAIQHCHSRGVVHRDIKDENILIDL-RRGCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHAL  218 (312)
T ss_dssp             HHHHHHHHHHHHHHHHTEECCCCSGGGEEEET-TTTEEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHH
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCChhhEEEeC-CCCeEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCc
Confidence            35679999999999999999999999999973 24579999999987654322   1234578999999999877665 4


Q ss_pred             ccchhHHHHHHHHHhcCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      ++|||||||++|+|++|..||.
T Consensus       219 ~~Di~slG~il~~l~~g~~pf~  240 (312)
T 2iwi_A          219 PATVWSLGILLYDMVCGDIPFE  240 (312)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cchHHHHHHHHHHHHHCCCCCC
Confidence            8999999999999999999985

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.96  E-value=1e-29  Score=276.99  Aligned_cols=152  Identities=30%  Similarity=0.463  Sum_probs=136.9

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++....   ......+.+|+.+++.++||||++++++|.+.+.+++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            3478999999999999999999999999999999986432   1234568899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ||||+++|+|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||++.....
T Consensus        87 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~--~~~l~Dfg~~~~~~~  161 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPS  161 (279)
T ss_dssp             EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTS--CEEECSCCEESCC--
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCC--CEEEEeccccccCCc
Confidence            999999999999998878899999999999999999999999999999999999998655  799999999976543

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.96  E-value=2.1e-28  Score=274.34  Aligned_cols=152  Identities=24%  Similarity=0.398  Sum_probs=134.6

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ..++|++.+.||+|+||.||+|.+..+|+.||+|++.....  ...+.+.+|+.+|+.++||||+++++++...+.+|+|
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  102 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV  102 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence            34789999999999999999999999999999999865432  2345678999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||+.++.|...+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus       103 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~  176 (331)
T 4aaa_A          103 FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG--VVKLCDFGFARTLAA  176 (331)
T ss_dssp             EECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--CEEECCCTTC-----
T ss_pred             EecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCC--cEEEEeCCCceeecC
Confidence            99999999988877777899999999999999999999999999999999999998655  899999999987644

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.96  E-value=6.9e-29  Score=272.49  Aligned_cols=153  Identities=24%  Similarity=0.399  Sum_probs=139.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ...++|.+.+.||+|+||.||+|.+..+++.||+|++....   ....+.+.+|+.+|+.++||||+++++++.+.+.+|
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF   91 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence            34578999999999999999999999999999999997542   234567889999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +||||+.|++|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        92 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~~~~  167 (294)
T 2rku_A           92 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEY  167 (294)
T ss_dssp             EEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC--CEEECCCTTCEECCS
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCC--CEEEEeccCceeccc
Confidence            9999999999999988777899999999999999999999999999999999999998655  799999999988753

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.96  E-value=4.7e-30  Score=288.31  Aligned_cols=160  Identities=20%  Similarity=0.260  Sum_probs=132.7

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--------cchHHHHHHHHHHHHhcC---------CCCcce
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--------NQYKSLFKNELDIMNQLC---------HRNLVR  244 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--------~~~~~~~~rEI~IL~~L~---------HPNIVk  244 (1310)
                      .++|++.+.||+|+||+||+|++  +|+.||||++....        ....+.+.+|+.+|+.|+         |||||+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            36799999999999999999987  78999999997542        123467889999999986         778877


Q ss_pred             EEEEEE------------------------------eCCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHH
Q psy5279         245 LHDSYE------------------------------TKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD  294 (1310)
Q Consensus       245 L~d~f~------------------------------~~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~  294 (1310)
                      +.+++.                              ..+.+|||||||++|++++.+.+ ..+++.+++.++.||+.||.
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~  175 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLA  175 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHH
Confidence            777653                              27899999999999988877754 56899999999999999999


Q ss_pred             Hhh-hCCeeecCCCCCCEEeecCC------------------CCeEEEEeeccceeecCCCCCCCcccchHHH
Q psy5279         295 YMH-RLSIAHLGLTPGDLLVAHPG------------------GRHLLLTDFGLSRRITSFGKLNPLEYDVRYV  348 (1310)
Q Consensus       295 YLH-s~gIVHRDLKPeNILL~~~~------------------~~~VKLsDFGLAr~i~~~~~l~~~~~t~~yv  348 (1310)
                      ||| ++||+||||||+|||++.++                  ...+||+|||+|+.....    ..+||+.|+
T Consensus       176 ~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~  244 (336)
T 2vuw_A          176 VAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSM  244 (336)
T ss_dssp             HHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTT
T ss_pred             HHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeeccc
Confidence            999 99999999999999998764                  137999999999987643    235554443

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=8e-29  Score=280.14  Aligned_cols=165  Identities=25%  Similarity=0.384  Sum_probs=133.2

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-----chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-----QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-----~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~l  255 (1310)
                      ..++|++.+.||+|+||.||+|.++.+|+.||||++.....     .....+.+|+.+|+.++|||||+++++|...+.+
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            45789999999999999999999999999999999864321     1224577999999999999999999999999999


Q ss_pred             EEEEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         256 TIISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+||||+.+ +|...+.... .+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus        88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~--~~kl~Dfg~a~~~~~  164 (346)
T 1ua2_A           88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG--VLKLADFGLAKSFGS  164 (346)
T ss_dssp             EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC--CEEECCCGGGSTTTS
T ss_pred             EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCC--CEEEEecccceeccC
Confidence            999999997 7877776543 589999999999999999999999999999999999998655  799999999987643


Q ss_pred             CC-CCCCcccchHHH
Q psy5279         335 FG-KLNPLEYDVRYV  348 (1310)
Q Consensus       335 ~~-~l~~~~~t~~yv  348 (1310)
                      .. .....++|+.|+
T Consensus       165 ~~~~~~~~~~t~~y~  179 (346)
T 1ua2_A          165 PNRAYTHQVVTRWYR  179 (346)
T ss_dssp             CCCCCCCSCCCCTTC
T ss_pred             CcccCCccccccccc
Confidence            32 233344454443

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.95  E-value=6.9e-29  Score=279.45  Aligned_cols=153  Identities=24%  Similarity=0.399  Sum_probs=140.0

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ...++|.+.+.||+|+||.||+|.+..+++.||+|++....   ....+.+.+|+.+|+.++||||+++++++.+.+.+|
T Consensus        38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  117 (335)
T 2owb_A           38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF  117 (335)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE
Confidence            35578999999999999999999999999999999997542   234567889999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +||||+.|++|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.+..
T Consensus       118 lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~  193 (335)
T 2owb_A          118 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL--EVKIGDFGLATKVEY  193 (335)
T ss_dssp             EEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC--CEEECCCTTCEECCS
T ss_pred             EEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCC--CEEEeeccCceeccc
Confidence            9999999999999988777899999999999999999999999999999999999998655  799999999998753

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.95  E-value=4.9e-30  Score=283.61  Aligned_cols=92  Identities=20%  Similarity=0.296  Sum_probs=72.8

Q ss_pred             CCCCcchhh-hhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhh-hhhchhhHHHHHHhcCCCCcccc
Q psy5279         593 PPTDKYQFI-SEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNL-RSLRHERIASLLEAYKPSTTASN  670 (1310)
Q Consensus       593 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  670 (1310)
                      .-.+.|..+ ..|.+|.||.|.+|..+. ++..||.|++.-    ......|...+ +.++|+||..+++.|.......+
T Consensus        14 ~~~~~y~~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~   88 (299)
T 3m2w_A           14 AIIDDYKVTSQVLGLGINGKVLQIFNKR-TQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK   88 (299)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred             ccccchhhcCcccccCCCeEEEEEEEcC-CCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence            345678888 459999999999987765 788999999864    34567788887 77799999999998865333346


Q ss_pred             hhhHHHHhhcCchhhhhhh
Q psy5279         671 IAVLVMEKLQGADVLSYLS  689 (1310)
Q Consensus       671 ~~~~~~~~~~~~~~~~~~~  689 (1310)
                      ...+|||+|.|.++..++.
T Consensus        89 ~~~lv~e~~~~~~L~~~l~  107 (299)
T 3m2w_A           89 CLLIVMECLDGGELFSRIQ  107 (299)
T ss_dssp             EEEEEECCCCSCBHHHHHH
T ss_pred             eEEEEEeecCCCcHHHHHH
Confidence            7889999999988877654

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.95  E-value=1.6e-29  Score=296.35  Aligned_cols=104  Identities=21%  Similarity=0.421  Sum_probs=80.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeec-----------CCCcEEEEeeccceeeccCCcc---cccCCCCCCc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-----------RSVQVKLIDLGCTQRVTKLGTL---IHPINTPNPE 1014 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~-----------~~~~VKL~DFGlAk~~~~~g~~---~~~~~tGtp~ 1014 (1310)
                      ..++.||+.||+|||++||+||||||+|||++..           ....+||+|||+++........   ......||+.
T Consensus       118 ~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~  197 (434)
T 2rio_A          118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSG  197 (434)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCT
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCC
Confidence            4467899999999999999999999999999752           2457999999999876432211   1123457899


Q ss_pred             ccccccccC-------CCCCCccchhHHHHHHHHHhc-CCCCCCCC
Q psy5279        1015 FAAPEVLAE-------EPIFPQTDVWSAGVLAYVLLS-GASPFRGQ 1052 (1310)
Q Consensus      1015 Y~APEvl~~-------~~ys~ksDIWSLGViLyeLLt-G~~PF~g~ 1052 (1310)
                      |+|||++.+       ..++.++|||||||++|+|++ |..||.+.
T Consensus       198 y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~  243 (434)
T 2rio_A          198 WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK  243 (434)
T ss_dssp             TSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred             ccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence            999999976       568889999999999999998 99999654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.95  E-value=1.9e-28  Score=270.75  Aligned_cols=154  Identities=31%  Similarity=0.539  Sum_probs=136.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .+.++|.+.+.||+|+||.||+|.++.+|+.||+|++..........+.+|+.+|+.++||||+++++++...+.+|+||
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (304)
T 2jam_A            6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM   85 (304)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence            46678999999999999999999999999999999998654444566889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeec-CCCCeEEEEeeccceeec
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH-PGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~-~~~~~VKLsDFGLAr~i~  333 (1310)
                      ||++||+|.+.+...+.+++.++..++.||+.||.|||++||+||||||+|||+.. +.+..+||+|||+++...
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A           86 QLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             CCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             EcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence            99999999999987788999999999999999999999999999999999999942 223479999999998653

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.95  E-value=8.1e-30  Score=275.76  Aligned_cols=150  Identities=17%  Similarity=0.227  Sum_probs=120.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++...............+++.|+|||++.+..++.
T Consensus       107 ~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  184 (268)
T 3sxs_A          107 LEMCYDVCEGMAFLESHQFIHRDLAARNCLVDR--DLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSS  184 (268)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEESSCSGGGEEECT--TCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEET
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCcCcceEEECC--CCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCch
Confidence            445779999999999999999999999999975  457999999999766543333333344567899999999888999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++|||||||++|+|++ |..||.+.+..+....+.......  .....++++.+++..|+. ++.+|+++.+++++
T Consensus       185 ~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          185 KSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLY--RPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             THHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCC--CCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCC--CCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999998 999999888777666554433211  224568899999999887 56679999887765

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.95  E-value=3.6e-28  Score=268.66  Aligned_cols=227  Identities=21%  Similarity=0.323  Sum_probs=170.6

Q ss_pred             ccCCCeeee-ceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHH-HhcCCCCcceEEEEEEe----CC
Q psy5279         180 PITDAYDFG-DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIM-NQLCHRNLVRLHDSYET----KD  253 (1310)
Q Consensus       180 ~~~d~Y~i~-~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL-~~L~HPNIVkL~d~f~~----~~  253 (1310)
                      .+.+.|.+. +.||+|+||.||+|.++.+|+.||+|++..     ...+.+|+.++ +.++||||++++++|..    ..
T Consensus        14 ~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~   88 (299)
T 3m2w_A           14 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK   88 (299)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred             ccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence            466778777 789999999999999999999999999963     23567899988 66799999999999987    77


Q ss_pred             eEEEEEecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccce
Q psy5279         254 SFTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSR  330 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr  330 (1310)
                      .+|+||||++||+|.+.+....  .+++..+..++.||+.||.|||++||+||||||+|||++.++ +..+||+|||+|+
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~  168 (299)
T 3m2w_A           89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  168 (299)
T ss_dssp             EEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             eEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence            8999999999999999997654  599999999999999999999999999999999999998632 3479999999998


Q ss_pred             eecCCCCCCC-ccc---chHHHhhhcCCCccccCCCCCC--------CCCCCcchhhhhhhcccchhhchhhhhhhcccC
Q psy5279         331 RITSFGKLNP-LEY---DVRYVRQALRHPWLNFADRKPT--------EDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRR  398 (1310)
Q Consensus       331 ~i~~~~~l~~-~~~---t~~yv~~~~r~P~l~~~~~~~~--------~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r  398 (1310)
                      .......... -.+   -.-|-...++.||.........        .............+...+.+++...+..+...|
T Consensus       169 ~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R  248 (299)
T 3m2w_A          169 ETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQR  248 (299)
T ss_dssp             ECTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             ccccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhC
Confidence            8754321100 000   1123334567777443221110        011111222223445556777777777889999


Q ss_pred             CCCCCccCCCcce
Q psy5279         399 RPLNSCYTHPSRM  411 (1310)
Q Consensus       399 ~~~~~cl~hpw~~  411 (1310)
                      +++.+++.|||..
T Consensus       249 ps~~e~l~hp~~~  261 (299)
T 3m2w_A          249 MTITEFMNHPWIM  261 (299)
T ss_dssp             CCHHHHHTSHHHH
T ss_pred             CCHHHHhcChhhc
Confidence            9999999999974

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.95  E-value=3.4e-30  Score=290.14  Aligned_cols=154  Identities=22%  Similarity=0.266  Sum_probs=118.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCC
Q psy5279         946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEE 1024 (1310)
Q Consensus       946 ~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~ 1024 (1310)
                      .....++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++....... .......||+.|+|||++.+.
T Consensus       193 ~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  270 (359)
T 3vhe_A          193 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR  270 (359)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG--GGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC--CCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCC
Confidence            345677899999999999999999999999999985  45699999999976533221 122233457889999999999


Q ss_pred             CCCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      .++.++|||||||++|+|++ |..||.+....+........... ......+++++.+++..|+. ++.+|+++.++++|
T Consensus       271 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          271 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            99999999999999999998 99999987654433222211111 12235678999999999887 56689999888765

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.95  E-value=7.1e-30  Score=278.32  Aligned_cols=150  Identities=17%  Similarity=0.251  Sum_probs=119.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++..............+++.|+|||++.+..++.
T Consensus       123 ~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  200 (283)
T 3gen_A          123 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVND--QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS  200 (283)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECT--TSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSH
T ss_pred             HHHHHHHHHHHHHHHHCCccCCCCccceEEEcC--CCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCc
Confidence            345679999999999999999999999999975  457999999998755332222222334567899999999889999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++|||||||++|+|++ |..||.+.+..+....+......  ......+++..+++..|+. ++.+|+++.+++.|
T Consensus       201 ~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          201 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL--YRPHLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC--CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCC--CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            9999999999999998 99999998887776666543221  1234568899999999886 55679998887754

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.95  E-value=5.6e-29  Score=271.84  Aligned_cols=165  Identities=27%  Similarity=0.468  Sum_probs=143.9

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....   ......+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            468999999999999999999999999999999996432   22345688999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      |||+++|+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||++....... .
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~kl~Dfg~~~~~~~~~-~  169 (284)
T 2vgo_A           93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG--ELKIADFGWSVHAPSLR-R  169 (284)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTC--CEEECCCTTCEECSSSC-B
T ss_pred             EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCC--CEEEecccccccCcccc-c
Confidence            99999999999998877899999999999999999999999999999999999998655  79999999998764422 2


Q ss_pred             CCcccchHHHh
Q psy5279         339 NPLEYDVRYVR  349 (1310)
Q Consensus       339 ~~~~~t~~yv~  349 (1310)
                      ...++|+.|.+
T Consensus       170 ~~~~~~~~y~a  180 (284)
T 2vgo_A          170 RTMCGTLDYLP  180 (284)
T ss_dssp             CCCCSCGGGCC
T ss_pred             ccccCCCCcCC
Confidence            33455655544

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.95  E-value=2.1e-28  Score=265.31  Aligned_cols=166  Identities=25%  Similarity=0.393  Sum_probs=139.2

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ..++|.+.+.||+|+||.||+|.+..+|+.||+|++....   ....+.+.+|+.+|+.++||||+++++++...+.+|+
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (276)
T 2h6d_A            9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM   88 (276)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence            4478999999999999999999999999999999996432   2234568899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      ||||++|++|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.......
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~~l~dfg~~~~~~~~~~  166 (276)
T 2h6d_A           89 VMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEF  166 (276)
T ss_dssp             EEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTS--CEEECCCCGGGCCCC---
T ss_pred             EEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCC--CEEEeecccccccCCCcc
Confidence            999999999999998877899999999999999999999999999999999999998655  799999999987755443


Q ss_pred             CCCcccchHHH
Q psy5279         338 LNPLEYDVRYV  348 (1310)
Q Consensus       338 l~~~~~t~~yv  348 (1310)
                      ....++|+.|.
T Consensus       167 ~~~~~~~~~y~  177 (276)
T 2h6d_A          167 LRTSCGSPNYA  177 (276)
T ss_dssp             ----------C
T ss_pred             eecccCCcccc
Confidence            33344444443

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.95  E-value=4.7e-30  Score=286.77  Aligned_cols=107  Identities=22%  Similarity=0.326  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ...++.||+.||.|||++||+||||||+|||++..+ ...+||+|||++........ .......+++.|+|||++.+..
T Consensus       142 ~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  221 (327)
T 2yfx_A          142 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI  221 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCC
Confidence            345678999999999999999999999999998532 45699999999865432211 1122334578999999999889


Q ss_pred             CCCccchhHHHHHHHHHhc-CCCCCCCCCh
Q psy5279        1026 IFPQTDVWSAGVLAYVLLS-GASPFRGQSE 1054 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLt-G~~PF~g~~~ 1054 (1310)
                      ++.++|||||||++|+|++ |..||.+.+.
T Consensus       222 ~~~~~Di~slG~il~ellt~g~~p~~~~~~  251 (327)
T 2yfx_A          222 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSN  251 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             CCchhhHHHHHHHHHHHHcCCCCCCCCcCH
Confidence            9999999999999999998 9999976544

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.95  E-value=1.8e-28  Score=269.95  Aligned_cols=151  Identities=26%  Similarity=0.400  Sum_probs=129.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEE---------
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE---------  250 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~---------  250 (1310)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||+|++........+.+.+|+.+|+.++||||+++++++.         
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   87 (320)
T 2i6l_A            8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD   87 (320)
T ss_dssp             EETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred             ccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence            56789999999999999999999999999999999998665556677889999999999999999999884         


Q ss_pred             -----eCCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEe
Q psy5279         251 -----TKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTD  325 (1310)
Q Consensus       251 -----~~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsD  325 (1310)
                           ..+.+|+||||+. |+|.+.+.. +.+++..++.++.||+.||+|||++||+||||||+|||++.++ ..+||+|
T Consensus        88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~~kl~D  164 (320)
T 2i6l_A           88 VGSLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED-LVLKIGD  164 (320)
T ss_dssp             ---CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT-TEEEECC
T ss_pred             cccccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC-CeEEEcc
Confidence                 4478999999998 589888754 5699999999999999999999999999999999999997433 4899999


Q ss_pred             eccceeec
Q psy5279         326 FGLSRRIT  333 (1310)
Q Consensus       326 FGLAr~i~  333 (1310)
                      ||+|+...
T Consensus       165 fg~~~~~~  172 (320)
T 2i6l_A          165 FGLARIMD  172 (320)
T ss_dssp             CTTCBCC-
T ss_pred             CccccccC
Confidence            99998764

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.95  E-value=5.1e-28  Score=275.44  Aligned_cols=167  Identities=23%  Similarity=0.343  Sum_probs=141.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeC-----C
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETK-----D  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-----~  253 (1310)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++..... .....+.+|+.+|++++||||+++++++...     .
T Consensus        24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  103 (364)
T 3qyz_A           24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK  103 (364)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence            455799999999999999999999999999999999975432 3346688999999999999999999999766     4


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .+|+||||+.| +|.+.+.. ..+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+...
T Consensus       104 ~~~iv~e~~~~-~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~a~~~~  179 (364)
T 3qyz_A          104 DVYIVQDLMET-DLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVAD  179 (364)
T ss_dssp             CEEEEEECCSE-EHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC--CEEECCCTTCEECC
T ss_pred             eEEEEEcccCc-CHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCC--CEEEEeCcceEecC
Confidence            79999999985 88888765 4699999999999999999999999999999999999998655  79999999999775


Q ss_pred             CCC----CCCCcccchHHHhh
Q psy5279         334 SFG----KLNPLEYDVRYVRQ  350 (1310)
Q Consensus       334 ~~~----~l~~~~~t~~yv~~  350 (1310)
                      ...    .....++|+.|+++
T Consensus       180 ~~~~~~~~~~~~~gt~~y~aP  200 (364)
T 3qyz_A          180 PDHDHTGFLTEYVATRWYRAP  200 (364)
T ss_dssp             GGGCBCCTTCCCCSCGGGCCH
T ss_pred             CCCCccccccccccccCCCCC
Confidence            432    23445666666543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.95  E-value=1e-29  Score=279.10  Aligned_cols=156  Identities=19%  Similarity=0.264  Sum_probs=120.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccc-----cC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVL-----AE 1023 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl-----~~ 1023 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++....... .......|++.|+|||++     .+
T Consensus       120 ~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~  196 (302)
T 2j7t_A          120 QVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL--EGDIRLADFGVSAKNLKTL-QKRDSFIGTPYWMAPEVVMCETMKD  196 (302)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT--TSCEEECCCHHHHHHHHHH-HC-----CCGGGCCHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHhcCCcccCCCCHHHEEECC--CCCEEEEECCCCccccccc-cccccccCChhhcCCeeeccccCCC
Confidence            445779999999999999999999999999975  4569999999875332111 111223577999999998     46


Q ss_pred             CCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1024 EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1024 ~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ..++.++|||||||++|+|++|..||.+.+.......+.............++.+..++|.+|+. ++.+|+++.++++|
T Consensus       197 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          197 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH  276 (302)
T ss_dssp             TTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred             CCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            67889999999999999999999999988776665554433322222345678999999999886 66789999999999


Q ss_pred             Ccccc
Q psy5279        1103 EFWHV 1107 (1310)
Q Consensus      1103 ~f~~~ 1107 (1310)
                      +|+..
T Consensus       277 ~~~~~  281 (302)
T 2j7t_A          277 PFVSS  281 (302)
T ss_dssp             TTTTT
T ss_pred             hHHhh
Confidence            99864

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.95  E-value=4.3e-28  Score=273.14  Aligned_cols=168  Identities=20%  Similarity=0.278  Sum_probs=127.3

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe------
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS------  254 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~------  254 (1310)
                      ..++|++.+.||+|+||.||+|.++.+|+.||||++.... .......+|+..|+.++|||||+++++|...+.      
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   99 (360)
T 3e3p_A           21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDI   99 (360)
T ss_dssp             HHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCE
T ss_pred             hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccce
Confidence            3478999999999999999999999999999999886532 223345678888999999999999999976544      


Q ss_pred             -EEEEEecCCCCch---HHHhhhcCCCCHHHHHHHHHHHHHHHHHhh--hCCeeecCCCCCCEEeecCCCCeEEEEeecc
Q psy5279         255 -FTIISELAGGGEL---LHSLTRQSYYTEYDIAHYIRQLLSGLDYMH--RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL  328 (1310)
Q Consensus       255 -lyLVmEy~~GGeL---~~~l~~~~~lsE~~i~~ii~QIl~GL~YLH--s~gIVHRDLKPeNILL~~~~~~~VKLsDFGL  328 (1310)
                       +++||||+.++.+   .........+++..+..++.||+.||.|||  ++||+||||||+|||++.. +..+||+|||+
T Consensus       100 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~-~~~~kl~Dfg~  178 (360)
T 3e3p_A          100 YLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA-DGTLKLCDFGS  178 (360)
T ss_dssp             EEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETT-TTEEEECCCTT
T ss_pred             eEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCC-CCcEEEeeCCC
Confidence             8999999998632   233345567999999999999999999999  9999999999999999852 23899999999


Q ss_pred             ceeecCCCCCCCcccchHHHhh
Q psy5279         329 SRRITSFGKLNPLEYDVRYVRQ  350 (1310)
Q Consensus       329 Ar~i~~~~~l~~~~~t~~yv~~  350 (1310)
                      |+.+.........++|+.|+++
T Consensus       179 a~~~~~~~~~~~~~gt~~y~aP  200 (360)
T 3e3p_A          179 AKKLSPSEPNVAYICSRYYRAP  200 (360)
T ss_dssp             CBCCCTTSCCCSTTSCGGGCCH
T ss_pred             ceecCCCCCcccccCCcceeCH
Confidence            9987765555555666655443

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.95  E-value=2.7e-28  Score=284.71  Aligned_cols=164  Identities=24%  Similarity=0.328  Sum_probs=133.0

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeC------C
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETK------D  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~------~  253 (1310)
                      .....|++.+.||+|+||+||+|.++.+|+.||||++.....    ...+|+.+|+.|+|||||+++++|...      .
T Consensus        51 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~  126 (420)
T 1j1b_A           51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV  126 (420)
T ss_dssp             CEEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred             cccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence            344579999999999999999999999999999999865321    234799999999999999999998542      2


Q ss_pred             eEEEEEecCCCCchHHHhh----hcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         254 SFTIISELAGGGELLHSLT----RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~----~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                      .+++||||+++ .|.+.+.    ....+++..++.++.||+.||.|||++||+||||||+|||++.++ ..+||+|||+|
T Consensus       127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~-~~~kl~DFG~a  204 (420)
T 1j1b_A          127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT-AVLKLCDFGSA  204 (420)
T ss_dssp             EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTT-TEEEECCCTTC
T ss_pred             eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCC-CeEEeccchhh
Confidence            47799999997 4444332    345699999999999999999999999999999999999998543 47899999999


Q ss_pred             eeecCCCCCCCcccchHHHh
Q psy5279         330 RRITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       330 r~i~~~~~l~~~~~t~~yv~  349 (1310)
                      +.+.........++|+.|++
T Consensus       205 ~~~~~~~~~~~~~~t~~y~a  224 (420)
T 1j1b_A          205 KQLVRGEPNVSYICSRYYRA  224 (420)
T ss_dssp             EECCTTCCCCSCCSCTTSCC
T ss_pred             hhcccCCCceeeeeCCCcCC
Confidence            98765544444555554433

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.95  E-value=6.8e-30  Score=285.07  Aligned_cols=101  Identities=23%  Similarity=0.377  Sum_probs=67.5

Q ss_pred             HHHHHHHHHHHHHHHHHC-CceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccc----c
Q psy5279         948 DAYCVTSVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVL----A 1022 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~-gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl----~ 1022 (1310)
                      ...++.|++.||.|||++ ||+||||||+|||++.  ++.+||+|||+++.......  .....|++.|+|||++    .
T Consensus       127 ~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~  202 (327)
T 3aln_A          127 LGKITLATVKALNHLKENLKIIHRDIKPSNILLDR--SGNIKLCDFGISGQLVDSIA--KTRDAGCRPYMAPERIDPSAS  202 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEET--TTEEEECCCSSSCC-----------------------------
T ss_pred             HHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcC--CCCEEEccCCCceecccccc--cccCCCCccccCceeeccccC
Confidence            345678999999999999 9999999999999975  56799999999876543222  1223577999999999    4


Q ss_pred             CCCCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1023 EEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1023 ~~~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      +..++.++|||||||++|+|++|..||.+.
T Consensus       203 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~  232 (327)
T 3aln_A          203 RQGYDVRSDVWSLGITLYELATGRFPYPKW  232 (327)
T ss_dssp             ---CCSHHHHHHHHHHHHHHHHSCCCSSCC
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence            567889999999999999999999999653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=6.6e-30  Score=277.06  Aligned_cols=150  Identities=19%  Similarity=0.277  Sum_probs=119.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++..............+++.|+|||++.+..++.
T Consensus       109 ~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  186 (269)
T 4hcu_A          109 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE--NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS  186 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECG--GGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCcchheEEEcC--CCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCc
Confidence            345679999999999999999999999999975  356999999998755332222222334567899999999899999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++|||||||++|+|++ |..||.+.+..+....+.....  .......++++.+++..|+. ++.+|+++.++++|
T Consensus       187 ~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          187 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR--LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCcc--CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            9999999999999999 9999999888877766654321  11234578999999999886 56689999887754

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.95  E-value=1.7e-28  Score=268.86  Aligned_cols=232  Identities=25%  Similarity=0.394  Sum_probs=174.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .+.++|++.+.||+|+||.||+|.++.+++.||+|++....  ......+.+|+.+|++++||||+++++++...+.+|+
T Consensus        19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            46678999999999999999999999999999999996542  2346678899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccceeecCCC
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr~i~~~~  336 (1310)
                      ||||+++++|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++.++ ...+||+|||+++......
T Consensus        99 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~  178 (287)
T 2wei_A           99 VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (287)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred             EEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence            999999999999988777899999999999999999999999999999999999997643 3479999999998775544


Q ss_pred             CCCCcccchHHHhh------------------------hcCCCccccCCCCCC----CCCCCcchhhhhhhcccchhhch
Q psy5279         337 KLNPLEYDVRYVRQ------------------------ALRHPWLNFADRKPT----EDTPKLNTDALRNYYNLYKDWYG  388 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~------------------------~~r~P~l~~~~~~~~----~~~p~~~~~~~~~~~~~~~D~~~  388 (1310)
                      ......+|+.|.++                        .+..||.........    .............+...+.+.+.
T Consensus       179 ~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  258 (287)
T 2wei_A          179 KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR  258 (287)
T ss_dssp             SCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHH
T ss_pred             ccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHH
Confidence            43333333333221                        122233211100000    00000000111122233455556


Q ss_pred             hhhhhhcccCCCCCCccCCCcce
Q psy5279         389 NAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       389 ~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ..+..+...|+++.+++.|||+.
T Consensus       259 ~~l~~dp~~Rps~~ell~hp~~~  281 (287)
T 2wei_A          259 KMLTFHPSLRITATQCLEHPWIQ  281 (287)
T ss_dssp             HHTCSSGGGSCCHHHHHHSHHHH
T ss_pred             HHcccChhhCcCHHHHhcCHHHh
Confidence            66666788999999999999974

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.95  E-value=6.4e-30  Score=280.82  Aligned_cols=101  Identities=23%  Similarity=0.357  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++........  .......+++.|+|||++.+..+
T Consensus       117 ~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  194 (295)
T 3ugc_A          117 LQYTSQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKF  194 (295)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE--TTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcC--CCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCC
Confidence            345679999999999999999999999999986  46799999999976543221  11223345678999999999999


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      +.++|||||||++|+|++|..||..
T Consensus       195 ~~~~Di~slG~~l~~l~~g~~~~~~  219 (295)
T 3ugc_A          195 SVASDVWSFGVVLYELFTYIEKSKS  219 (295)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred             ChHHHHHHHHHHHHHHHhcccccCC
Confidence            9999999999999999999999864

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.95  E-value=9.7e-30  Score=283.24  Aligned_cols=101  Identities=22%  Similarity=0.322  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHHC---CceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC
Q psy5279         948 DAYCVTSVLDGLQYLHWR---GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE 1024 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~---gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~ 1024 (1310)
                      ...++.||+.||.|||++   ||+||||||+|||++.  +..+||+|||+++..............||+.|+|||++.+.
T Consensus       133 ~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  210 (326)
T 3uim_A          133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE--EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG  210 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECT--TCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECC--CCCEEeccCccccccCcccccccccccCCcCccCHHHhccC
Confidence            345678999999999999   9999999999999975  45799999999987654333333444578999999999988


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCC
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      .++.++|||||||++|+|++|..||.
T Consensus       211 ~~~~~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          211 KSSEKTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             EECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             CCCccccchhHHHHHHHHHhCCCccc
Confidence            89999999999999999999999995

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.95  E-value=8.9e-30  Score=281.14  Aligned_cols=80  Identities=16%  Similarity=0.138  Sum_probs=57.1

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchh---hhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTL---HQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      -+.|.++..|.+|.||.|.+|..+. ++..||.|.+.......   .....+...++.++|++|..+++.+...    +.
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~----~~   98 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRK-TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN----TD   98 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETT-TCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS----SE
T ss_pred             hccccccceeeecCCeeEEEEEEec-CCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC----Cc
Confidence            4679999999999999999987665 78899999997654332   2233344568899999999999988765    45


Q ss_pred             hhHHHHhh
Q psy5279         672 AVLVMEKL  679 (1310)
Q Consensus       672 ~~~~~~~~  679 (1310)
                      ..+|||++
T Consensus        99 ~~lv~e~~  106 (318)
T 2dyl_A           99 VFIAMELM  106 (318)
T ss_dssp             EEEEECCC
T ss_pred             EEEEEecc
Confidence            78899998

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.95  E-value=4.9e-28  Score=279.92  Aligned_cols=164  Identities=21%  Similarity=0.362  Sum_probs=138.9

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcC--CCCcceEEEEEEeCCeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLC--HRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~--HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ...|++.+.||+|+||+||+|.+.. |+.||||++.....  ...+.+.+|+.+|+.|.  |||||++++++...+.+||
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l  133 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM  133 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence            3569999999999999999999765 99999999976432  34567889999999996  5999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-  336 (1310)
                      ||| +.+|+|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||+++   ..+||+|||+|+.+.... 
T Consensus       134 v~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~---~~~kl~DFG~a~~~~~~~~  209 (390)
T 2zmd_A          134 VME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPDTT  209 (390)
T ss_dssp             EEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESS---SCEEECCCSSSCCC-----
T ss_pred             EEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEEC---CeEEEEecCccccccCCCc
Confidence            999 678899999988888999999999999999999999999999999999999953   379999999999775432 


Q ss_pred             --CCCCcccchHHHhh
Q psy5279         337 --KLNPLEYDVRYVRQ  350 (1310)
Q Consensus       337 --~l~~~~~t~~yv~~  350 (1310)
                        .....+||+.|+++
T Consensus       210 ~~~~~~~~gt~~y~aP  225 (390)
T 2zmd_A          210 SVVKDSQVGAVNYMPP  225 (390)
T ss_dssp             ----CCSCCCGGGCCH
T ss_pred             cccCCCCCcCCCccCh
Confidence              23455677776654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.95  E-value=6.8e-28  Score=272.27  Aligned_cols=149  Identities=23%  Similarity=0.416  Sum_probs=132.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCC--CCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCH--RNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~H--PNIVkL~d~f~~~~~ly  256 (1310)
                      ..++|++.+.||+|+||.||+|.+ .+++.||||++.....  ...+.+.+|+.+|+.|+|  |||+++++++...+.+|
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~   85 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY   85 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence            356799999999999999999987 5699999999975432  334678899999999987  99999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||| +.+|+|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++ ++  .+||+|||+|+.+..
T Consensus        86 lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~--~~kl~DFG~a~~~~~  159 (343)
T 3dbq_A           86 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DG--MLKLIDFGIANQMQP  159 (343)
T ss_dssp             EEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TT--EEEECCCSSSCCC--
T ss_pred             EEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CC--cEEEeecccccccCc
Confidence            9999 67889999999888899999999999999999999999999999999999996 33  799999999987644

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.95  E-value=4.5e-28  Score=266.10  Aligned_cols=151  Identities=28%  Similarity=0.442  Sum_probs=134.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ...++|++.+.||+|+||.||+|.+..+|+.||+|++........+.+.+|+.+|+.++||||+++++++...+.+|+||
T Consensus        16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   95 (302)
T 2j7t_A           16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI   95 (302)
T ss_dssp             CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred             CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence            56788999999999999999999999999999999997665556677889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         260 ELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ||++||+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++..
T Consensus        96 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~  167 (302)
T 2j7t_A           96 EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG--DIRLADFGVSAKN  167 (302)
T ss_dssp             ECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTS--CEEECCCHHHHHH
T ss_pred             EeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCC--CEEEEECCCCccc
Confidence            99999999888765 35699999999999999999999999999999999999998655  7999999998643

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.95  E-value=2.6e-28  Score=276.05  Aligned_cols=166  Identities=21%  Similarity=0.345  Sum_probs=128.5

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc-----------hHHHHHHHHHHHHhcCCCCcceEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-----------YKSLFKNELDIMNQLCHRNLVRLHDS  248 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~-----------~~~~~~rEI~IL~~L~HPNIVkL~d~  248 (1310)
                      .+.++|.+.+.||+|+||.||+|.+.. |+.||||++......           ..+.+.+|+.+|++++||||++++++
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   97 (362)
T 3pg1_A           19 AMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI   97 (362)
T ss_dssp             HTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred             HhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence            567899999999999999999999765 999999998643211           12668899999999999999999999


Q ss_pred             EEe-----CCeEEEEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEE
Q psy5279         249 YET-----KDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL  322 (1310)
Q Consensus       249 f~~-----~~~lyLVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VK  322 (1310)
                      |..     ...+|+||||+. |+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+|
T Consensus        98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~--~~k  174 (362)
T 3pg1_A           98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN--DIT  174 (362)
T ss_dssp             EEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC--CEE
T ss_pred             EEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCC--CEE
Confidence            954     346899999999 5777777644 3599999999999999999999999999999999999998655  799


Q ss_pred             EEeeccceeecCCCCCCCcccchHHHh
Q psy5279         323 LTDFGLSRRITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       323 LsDFGLAr~i~~~~~l~~~~~t~~yv~  349 (1310)
                      |+|||+|+...........++|+.|.+
T Consensus       175 l~Dfg~~~~~~~~~~~~~~~~t~~y~a  201 (362)
T 3pg1_A          175 ICDFNLAREDTADANKTHYVTHRWYRA  201 (362)
T ss_dssp             ECCTTC---------------CGGGCC
T ss_pred             EEecCcccccccccccceecccceecC
Confidence            999999987655444444455544443

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.95  E-value=3e-29  Score=287.90  Aligned_cols=151  Identities=20%  Similarity=0.277  Sum_probs=121.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++....... .....+.+++.|+|||++.+..|
T Consensus       205 ~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~--~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  282 (370)
T 2psq_A          205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY  282 (370)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT--TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCC
T ss_pred             HHHHHHHHHHHHHHHHhCCeeccccchhhEEECC--CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCC
Confidence            4556789999999999999999999999999975  46799999999986543222 22334566789999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|||||||++|+|++ |..||.+.+..+....+....  .+.....+++++.+++.+|+. ++.+|+++.+++.+
T Consensus       283 ~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          283 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH--RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC--CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999 999999988777766554332  122335678999999999886 56678888887643

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.95  E-value=7.6e-30  Score=286.56  Aligned_cols=148  Identities=11%  Similarity=0.083  Sum_probs=112.4

Q ss_pred             HHHHHHHHHHHHHHHH-HCCceecccCCCcEEEeecC------------------CCcEEEEeeccceeeccCCcccccC
Q psy5279         948 DAYCVTSVLDGLQYLH-WRGLCHLNIEPDNVVMASVR------------------SVQVKLIDLGCTQRVTKLGTLIHPI 1008 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLH-s~gIVHRDLKPeNILl~~~~------------------~~~VKL~DFGlAk~~~~~g~~~~~~ 1008 (1310)
                      +..++.||+.||+||| ++|||||||||+|||++..+                  ...+||+|||+|+.....      .
T Consensus       163 ~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~  236 (336)
T 2vuw_A          163 AKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------I  236 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------E
T ss_pred             HHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------c
Confidence            3456789999999999 99999999999999998743                  127999999999866432      1


Q ss_pred             CCCCCcccccccccCCCCCCccchhHHHHH-HHHHhcCCCCCCCCCh-hHHHh----hhccccccccccchhccHHHHHH
Q psy5279        1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVL-AYVLLSGASPFRGQSE-PETRQ----NVNFVRYRFEYLFKELTQEATRF 1082 (1310)
Q Consensus      1009 ~tGtp~Y~APEvl~~~~ys~ksDIWSLGVi-LyeLLtG~~PF~g~~~-~e~~~----~I~~~~~~f~~~~~~lS~eakdL 1082 (1310)
                      ..||+.|||||++.+.. +.++||||+|++ .++++.|..||.+... .....    .+..........+..+++++++|
T Consensus       237 ~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dl  315 (336)
T 2vuw_A          237 VVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEF  315 (336)
T ss_dssp             EECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHH
T ss_pred             EEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHH
Confidence            24779999999999776 889999998776 7888999999954211 11111    11122222233456789999999


Q ss_pred             HHHhccCCcchhcHHhhh-CCCccc
Q psy5279        1083 LMLIFKHEVDWITLANNI-DHEFWH 1106 (1310)
Q Consensus      1083 L~~il~~~~~rit~~e~L-~H~f~~ 1106 (1310)
                      |.+||..+    ++.+++ +|+|+.
T Consensus       316 i~~~L~~d----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          316 HRTMLNFS----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHHGGGSS----SHHHHHHHCGGGC
T ss_pred             HHHHhccC----CHHHHHhcCCCcC
Confidence            99999865    999999 999973

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.95  E-value=1.4e-28  Score=282.58  Aligned_cols=151  Identities=25%  Similarity=0.410  Sum_probs=118.9

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC-----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK-----  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-----  252 (1310)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||||++....  ......+.+|+.+|+.++|||||+++++|...     
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~  105 (367)
T 2fst_X           26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE  105 (367)
T ss_dssp             EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred             CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence            45688999999999999999999999999999999996532  23455678999999999999999999999765     


Q ss_pred             -CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         253 -DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       253 -~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                       ..+|+||||+ +++|.+.+.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus       106 ~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~--~~kL~DFG~a~~  181 (367)
T 2fst_X          106 FNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKILDFGLARH  181 (367)
T ss_dssp             CCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC--CEEECC------
T ss_pred             CCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCC--CEEEeecccccc
Confidence             5689999999 6788887754 5799999999999999999999999999999999999998655  899999999987


Q ss_pred             ecC
Q psy5279         332 ITS  334 (1310)
Q Consensus       332 i~~  334 (1310)
                      ...
T Consensus       182 ~~~  184 (367)
T 2fst_X          182 TAD  184 (367)
T ss_dssp             ---
T ss_pred             ccc
Confidence            643

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.95  E-value=7e-28  Score=278.74  Aligned_cols=163  Identities=25%  Similarity=0.307  Sum_probs=131.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe------
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS------  254 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~------  254 (1310)
                      ...+|.+.+.||+|+||+||+|.+..+++ +|+|++.....    ...+|+.+|+.++|||||+++++|...+.      
T Consensus        38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~  112 (394)
T 4e7w_A           38 REIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF  112 (394)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred             ccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence            45679999999999999999999988776 88887754322    12379999999999999999999965543      


Q ss_pred             EEEEEecCCCCchHHH---hhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         255 FTIISELAGGGELLHS---LTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~---l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                      +|+|||||+++.+...   ......+++..++.++.||+.||+|||++||+||||||+|||++.. +..+||+|||+|+.
T Consensus       113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~-~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPP-SGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT-TTEEEECCCTTCEE
T ss_pred             EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCC-CCcEEEeeCCCccc
Confidence            8999999998643322   2234579999999999999999999999999999999999999832 24899999999998


Q ss_pred             ecCCCCCCCcccchHHHh
Q psy5279         332 ITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       332 i~~~~~l~~~~~t~~yv~  349 (1310)
                      ..........++|+.|++
T Consensus       192 ~~~~~~~~~~~~t~~y~a  209 (394)
T 4e7w_A          192 LIAGEPNVSYICSRYYRA  209 (394)
T ss_dssp             CCTTCCCCSSCSCGGGCC
T ss_pred             ccCCCCCcccccCcCccC
Confidence            766555555565655544

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.95  E-value=1.8e-28  Score=277.63  Aligned_cols=151  Identities=23%  Similarity=0.389  Sum_probs=138.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ...++|++.+.||+|+||.||+|.+..+|+.||+|++.... ....+.+.+|+.+|+.++||||+++++++..++.+|+|
T Consensus        30 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  109 (360)
T 3eqc_A           30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC  109 (360)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence            34678999999999999999999999999999999997653 33456788999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL-SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~-gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      |||++||+|.+.+...+.+++..+..++.|++.||.|||++ ||+||||||+|||++.++  .+||+|||+|+.+
T Consensus       110 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~  182 (360)
T 3eqc_A          110 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQL  182 (360)
T ss_dssp             ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTC--CEEECCCCCCHHH
T ss_pred             EECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCC--CEEEEECCCCccc
Confidence            99999999999998877899999999999999999999996 999999999999998765  7999999999765

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.95  E-value=1.6e-27  Score=267.73  Aligned_cols=151  Identities=24%  Similarity=0.411  Sum_probs=133.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeC-----C
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETK-----D  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-----~  253 (1310)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||||++..... .....+.+|+.+|+.++||||+++++++...     .
T Consensus         8 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   87 (353)
T 2b9h_A            8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN   87 (353)
T ss_dssp             CSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred             ccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence            567899999999999999999999999999999999964332 3345678999999999999999999988765     6


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .+|+||||+. |+|.+.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+.
T Consensus        88 ~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~--~~kl~Dfg~a~~~~  163 (353)
T 2b9h_A           88 EVYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC--DLKVCDFGLARIID  163 (353)
T ss_dssp             CEEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC--CEEECCCTTCEECC
T ss_pred             eEEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCC--cEEEEecccccccc
Confidence            8999999998 588887765 5699999999999999999999999999999999999998655  79999999999765


Q ss_pred             C
Q psy5279         334 S  334 (1310)
Q Consensus       334 ~  334 (1310)
                      .
T Consensus       164 ~  164 (353)
T 2b9h_A          164 E  164 (353)
T ss_dssp             -
T ss_pred             c
Confidence            3

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.95  E-value=1.4e-29  Score=278.08  Aligned_cols=100  Identities=26%  Similarity=0.349  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++........  .......+++.|+|||++.+..+
T Consensus       129 ~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  206 (302)
T 4e5w_A          129 LKYAVQICKGMDYLGSRQYVHRDLAARNVLVES--EHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKF  206 (302)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE--TTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHhhcCCcccCCCchheEEEcC--CCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCC
Confidence            345679999999999999999999999999986  45799999999977644322  12223456778999999999889


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFR 1050 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~ 1050 (1310)
                      +.++|||||||++|+|++|..||.
T Consensus       207 ~~~~Di~slG~il~~l~~g~~p~~  230 (302)
T 4e5w_A          207 YIASDVWSFGVTLHELLTYCDSDS  230 (302)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred             CcchhHHHHHHHHHHHHHccCCCc
Confidence            999999999999999999999864

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.95  E-value=3e-28  Score=265.52  Aligned_cols=218  Identities=20%  Similarity=0.205  Sum_probs=152.4

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-c-hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-Q-YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~-~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ..++|++.+.||+|+||.||+|.++.+|+.||+|++..... . ....+.++..+++.++||||+++++++.+++.+|+|
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            34789999999999999999999999999999999975432 2 223344555668889999999999999999999999


Q ss_pred             EecCCCCchHHHhh----hcCCCCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         259 SELAGGGELLHSLT----RQSYYTEYDIAHYIRQLLSGLDYMHRL-SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       259 mEy~~GGeL~~~l~----~~~~lsE~~i~~ii~QIl~GL~YLHs~-gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |||++| +|.+.+.    ....+++..+..++.||+.||.|||++ ||+||||||+|||++.++  .+||+|||+|+...
T Consensus        85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~  161 (290)
T 3fme_A           85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG--QVKMCDFGISGYLV  161 (290)
T ss_dssp             EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTC--CEEBCCC-------
T ss_pred             Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC--CEEEeecCCccccc
Confidence            999985 6655543    345699999999999999999999998 999999999999998655  89999999998765


Q ss_pred             CCCCCCCcccchHHHhh-----------------------------hcCCCccccCCCCCCCCCCCcchhhh--------
Q psy5279         334 SFGKLNPLEYDVRYVRQ-----------------------------ALRHPWLNFADRKPTEDTPKLNTDAL--------  376 (1310)
Q Consensus       334 ~~~~l~~~~~t~~yv~~-----------------------------~~r~P~l~~~~~~~~~~~p~~~~~~~--------  376 (1310)
                      ........++|+.|+++                             .++.||-...          .....+        
T Consensus       162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----------~~~~~~~~~~~~~~  231 (290)
T 3fme_A          162 DDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG----------TPFQQLKQVVEEPS  231 (290)
T ss_dssp             --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS----------CHHHHHHHHHHSCC
T ss_pred             ccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC----------chHHHHHHHhccCC
Confidence            44333223344333322                             2233332111          000111        


Q ss_pred             -----hhhcccchhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         377 -----RNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       377 -----~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                           ..+...+.+++...+..+...|+++.+++.|||..
T Consensus       232 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~  271 (290)
T 3fme_A          232 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT  271 (290)
T ss_dssp             CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccc
Confidence                 01222345566666667789999999999999974

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.95  E-value=2.8e-29  Score=276.62  Aligned_cols=152  Identities=20%  Similarity=0.265  Sum_probs=122.4

Q ss_pred             hHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCC
Q psy5279         947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       947 ~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ....++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++....... .......+++.|+|||++.+..
T Consensus       151 ~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  228 (314)
T 2ivs_A          151 DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAE--GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI  228 (314)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHHHHCCCcccccchheEEEcC--CCCEEEccccccccccccccceeccCCCCcccccChhhhcCCC
Confidence            35667889999999999999999999999999985  46799999999976643322 2233445678899999999988


Q ss_pred             CCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++.++|||||||++|+|++ |..||.+.+..+....+....  .......++++..+++.+|+. ++.+|+++.+++++
T Consensus       229 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH--RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCC--cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            9999999999999999999 999999988777766554432  122345788999999999986 56679998887654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.95  E-value=1e-27  Score=273.27  Aligned_cols=223  Identities=19%  Similarity=0.277  Sum_probs=167.1

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ..+.|++.+.||+|+||.||+|.+..+|+.||||++.....   ...+.+.+|+.+|++++|||||+++++|..++..||
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  131 (348)
T 1u5q_A           52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL  131 (348)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence            44669999999999999999999999999999999975432   223568899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhh-hcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         258 ISELAGGGELLHSLT-RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~-~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      ||||+. |+|.+.+. ....+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+..... 
T Consensus       132 v~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~DfG~a~~~~~~-  207 (348)
T 1u5q_A          132 VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKLGDFGSASIMAPA-  207 (348)
T ss_dssp             EEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT--EEEECCCTTCBSSSSB-
T ss_pred             EEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC--CEEEeeccCceecCCC-
Confidence            999998 56766664 345699999999999999999999999999999999999998655  8999999999876442 


Q ss_pred             CCCCcccchHHHhhhcC-----CCc------cc--------cCCCCCCCCCCCcchhhhh-------------hhcccch
Q psy5279         337 KLNPLEYDVRYVRQALR-----HPW------LN--------FADRKPTEDTPKLNTDALR-------------NYYNLYK  384 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~~r-----~P~------l~--------~~~~~~~~~~p~~~~~~~~-------------~~~~~~~  384 (1310)
                        ...++|+.|+++...     .++      +.        +....|...  ....+.+.             .+...+.
T Consensus       208 --~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~  283 (348)
T 1u5q_A          208 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN--MNAMSALYHIAQNESPALQSGHWSEYFR  283 (348)
T ss_dssp             --CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT--SCHHHHHHHHHHSCCCCCCCTTSCHHHH
T ss_pred             --CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC--CChHHHHHHHHhcCCCCCCCCCCCHHHH
Confidence              344666666543211     110      00        001111000  00001110             1122234


Q ss_pred             hhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         385 DWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       385 D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +++...+..+...|+++.+++.|||..
T Consensus       284 ~li~~~l~~dP~~Rps~~~ll~h~~~~  310 (348)
T 1u5q_A          284 NFVDSCLQKIPQDRPTSEVLLKHRFVL  310 (348)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHTTCHHHH
T ss_pred             HHHHHHcccChhhCcCHHHHhhChhhh
Confidence            556666667789999999999999974

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.95  E-value=9.5e-28  Score=262.91  Aligned_cols=151  Identities=26%  Similarity=0.430  Sum_probs=134.4

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEe----CCeE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYET----KDSF  255 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~----~~~l  255 (1310)
                      ...|.+.+.||+|+||.||+|.+..++..||+|++....  ....+.+.+|+.+|+.++||||++++++|..    ...+
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  104 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI  104 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence            456899999999999999999999999999999997542  3345678899999999999999999999876    4568


Q ss_pred             EEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC--eeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         256 TIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS--IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~g--IVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ++||||++||+|.+.+.....+++..+..++.||+.||.|||++|  |+||||||+|||++.+ +..+||+|||+|+...
T Consensus       105 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~-~~~~kl~Dfg~~~~~~  183 (290)
T 1t4h_A          105 VLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP-TGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESST-TSCEEECCTTGGGGCC
T ss_pred             EEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECC-CCCEEEeeCCCccccc
Confidence            999999999999999988778999999999999999999999999  9999999999999732 2379999999997543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.95  E-value=6.3e-28  Score=273.95  Aligned_cols=135  Identities=21%  Similarity=0.366  Sum_probs=118.2

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC--------CCCcceEEEEEE-
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC--------HRNLVRLHDSYE-  250 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~--------HPNIVkL~d~f~-  250 (1310)
                      .+.++|++.+.||+|+||+||+|.+..+|+.||||++... ....+.+.+|+.+|+.+.        ||||++++++|. 
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~  112 (397)
T 1wak_A           34 LFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI  112 (397)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred             hcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence            5678999999999999999999999999999999999643 334566889999999996        788999999998 


Q ss_pred             ---eCCeEEEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCCEEeecC
Q psy5279         251 ---TKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRL-SIAHLGLTPGDLLVAHP  316 (1310)
Q Consensus       251 ---~~~~lyLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~-gIVHRDLKPeNILL~~~  316 (1310)
                         ....++|||||+ +|+|.+.+...  ..+++..++.++.||+.||.|||++ ||+||||||+|||++.+
T Consensus       113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~  183 (397)
T 1wak_A          113 SGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN  183 (397)
T ss_dssp             EETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCC
T ss_pred             cCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEecc
Confidence               566899999999 55666666544  4599999999999999999999998 99999999999999754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.95  E-value=1.3e-27  Score=267.72  Aligned_cols=198  Identities=16%  Similarity=0.202  Sum_probs=156.5

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||||++.....  ...+.+|+.+|+.| +||||+++++++...+..|+|
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv   83 (330)
T 2izr_A            6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV   83 (330)
T ss_dssp             EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred             EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence            355789999999999999999999999999999999875432  23477899999999 999999999999999999999


Q ss_pred             EecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC---CeEEEEeeccceeecC
Q psy5279         259 SELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG---RHLLLTDFGLSRRITS  334 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~---~~VKLsDFGLAr~i~~  334 (1310)
                      |||+ ||+|.+.+... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.   ..+||+|||+|+.+..
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~  162 (330)
T 2izr_A           84 LELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID  162 (330)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred             EEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence            9999 99999988763 56999999999999999999999999999999999999986541   1299999999998754


Q ss_pred             CCC--------CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhh--chhhhhhhcccCCCCC
Q psy5279         335 FGK--------LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDW--YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       335 ~~~--------l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~--~~~~~l~~~~~r~~~~  402 (1310)
                      ...        ....+||+.|++     |++..+                 ..++...|+  +|..+...++.+.|+.
T Consensus       163 ~~~~~~~~~~~~~~~~gt~~y~a-----PE~~~~-----------------~~~~~~~Di~slG~il~ell~g~~Pf~  218 (330)
T 2izr_A          163 PETKKHIPYREHKSLTGTARYMS-----INTHLG-----------------KEQSRRDDLEALGHMFMYFLRGSLPWQ  218 (330)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCC-----HHHHTT-----------------CCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             CCCCccccccccCCcCCCccccC-----hHHHcC-----------------CCCCchhHHHHHHHHHHHHhcCCCCcc
Confidence            332        234555655543     443321                 113344663  5666666666655543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.95  E-value=3.7e-29  Score=279.69  Aligned_cols=149  Identities=24%  Similarity=0.365  Sum_probs=111.7

Q ss_pred             HHHHHHHHHHHHHHHHCC--ceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRG--LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~g--IVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||.|||++|  |+||||||+|||++.  +..+||+|||+++...... .......||+.|+|||++.+..+
T Consensus       140 ~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~--~~~~kL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~  216 (309)
T 3p86_A          140 LSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDK--KYTVKVCDFGLSRLKASTF-LSSKSAAGTPEWMAPEVLRDEPS  216 (309)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECT--TCCEEECCCC------------------CCTTSCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeC--CCcEEECCCCCCccccccc-cccccCCCCccccChhhhcCCCC
Confidence            445779999999999999  999999999999975  4579999999987543221 11223457899999999999999


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|||||||++|+|++|..||.+.+..+....+....... .....+++++.+||.+|+. ++.+|+++.++++
T Consensus       217 ~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          217 NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL-EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             CTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC-CCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            999999999999999999999999988877766553322222 2335788999999999887 5567888888764

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.95  E-value=4.1e-28  Score=277.62  Aligned_cols=150  Identities=25%  Similarity=0.439  Sum_probs=129.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeE--
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSF--  255 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~l--  255 (1310)
                      .+.++|.+.+.||+|+||.||+|.++.+|+.||||++.....  .....+.+|+.+|+.++||||++++++|...+..  
T Consensus        39 ~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  118 (371)
T 4exu_A           39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN  118 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred             cccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence            466899999999999999999999999999999999975432  3356688999999999999999999999988765  


Q ss_pred             ----EEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         256 ----TIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       256 ----yLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                          |+||||+. |+|.+.+.  ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus       119 ~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~--~~kL~Dfg~a~~  193 (371)
T 4exu_A          119 FYDFYLVMPFMQ-TDLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC--ELKILDFGLARH  193 (371)
T ss_dssp             CCCCEEEEECCC-EEHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC--CEEECSTTCC--
T ss_pred             ceeEEEEEcccc-ccHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCC--CEEEEecCcccc
Confidence                99999998 57877764  3499999999999999999999999999999999999998655  799999999987


Q ss_pred             ecC
Q psy5279         332 ITS  334 (1310)
Q Consensus       332 i~~  334 (1310)
                      ...
T Consensus       194 ~~~  196 (371)
T 4exu_A          194 ADA  196 (371)
T ss_dssp             ---
T ss_pred             ccc
Confidence            643

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.95  E-value=1.3e-29  Score=276.24  Aligned_cols=154  Identities=21%  Similarity=0.317  Sum_probs=110.3

Q ss_pred             HHHHHHHHHHHHHHHHHC-CceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccc----c
Q psy5279         948 DAYCVTSVLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVL----A 1022 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~-gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl----~ 1022 (1310)
                      ...++.||+.||.|||++ ||+||||||+|||++.  ...+||+|||+++.......  .....|++.|+|||++    .
T Consensus       111 ~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~  186 (290)
T 3fme_A          111 LGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA--LGQVKMCDFGISGYLVDDVA--KDIDAGCKPYMAPERINPELN  186 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECT--TCCEEBCCC-----------------CCCCCCSCHHHHSCCTT
T ss_pred             HHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC--CCCEEEeecCCccccccccc--ccccCCCccccChhhcChhhc
Confidence            455678999999999998 9999999999999975  45799999999876543222  2223577999999996    4


Q ss_pred             CCCCCCccchhHHHHHHHHHhcCCCCCCCCChh-H-HHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhh
Q psy5279        1023 EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP-E-TRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANN 1099 (1310)
Q Consensus      1023 ~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~-e-~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~ 1099 (1310)
                      +..++.++|||||||++|+|++|..||.+.... . ....+......  .....+++++++|+.+|+. ++.+|+++.++
T Consensus       187 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~  264 (290)
T 3fme_A          187 QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ--LPADKFSAEFVDFTSQCLKKNSKERPTYPEL  264 (290)
T ss_dssp             C--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC--CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCC--cccccCCHHHHHHHHHHhhcChhhCcCHHHH
Confidence            567888999999999999999999999864332 2 22222222211  1234678999999999887 56689999999


Q ss_pred             hCCCcccc
Q psy5279        1100 IDHEFWHV 1107 (1310)
Q Consensus      1100 L~H~f~~~ 1107 (1310)
                      ++|+|+..
T Consensus       265 l~hp~f~~  272 (290)
T 3fme_A          265 MQHPFFTL  272 (290)
T ss_dssp             TTSHHHHH
T ss_pred             HhCccccc
Confidence            99999864

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.95  E-value=1.1e-27  Score=280.65  Aligned_cols=167  Identities=18%  Similarity=0.324  Sum_probs=141.1

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc------CCCCcceEEEEEEeC
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL------CHRNLVRLHDSYETK  252 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L------~HPNIVkL~d~f~~~  252 (1310)
                      ..+..+|++.+.||+|+||.||+|.+..+++.||||++... ......+.+|+.+|+.+      +||||++++++|...
T Consensus        93 ~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~  171 (429)
T 3kvw_A           93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR  171 (429)
T ss_dssp             CEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred             CcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence            35678899999999999999999999999999999999643 23345677899998887      577999999999999


Q ss_pred             CeEEEEEecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         253 DSFTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      +.++|||||+. |+|.+.+....  .+++..++.++.||+.||+|||++||+||||||+|||++.++...+||+|||+|+
T Consensus       172 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~  250 (429)
T 3kvw_A          172 NHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC  250 (429)
T ss_dssp             TEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred             CeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence            99999999997 58888886653  4999999999999999999999999999999999999987764459999999998


Q ss_pred             eecCCCCCCCcccchHHHh
Q psy5279         331 RITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~  349 (1310)
                      ....  ...+.++|+.|++
T Consensus       251 ~~~~--~~~~~~gt~~y~a  267 (429)
T 3kvw_A          251 YEHQ--RVYTYIQSRFYRA  267 (429)
T ss_dssp             ETTC--CCCSSCSCGGGCC
T ss_pred             ecCC--cccccCCCCCccC
Confidence            6543  2334455655544

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.95  E-value=6e-30  Score=295.53  Aligned_cols=103  Identities=24%  Similarity=0.380  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec--CCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC--
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV--RSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-- 1023 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~--~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-- 1023 (1310)
                      ...++.||+.||.|||++||+||||||+|||+...  ....+||+|||+++........  ....||+.|+|||++.+  
T Consensus       114 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~  191 (396)
T 4eut_A          114 FLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF--VSLYGTEEYLHPDMYERAV  191 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGS--SCSSSCCTTCCHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCcc--ccccCCccccCHHHhhccc
Confidence            34567899999999999999999999999998322  2456999999999876433222  23357899999999875  


Q ss_pred             ------CCCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1024 ------EPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1024 ------~~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                            ..++.++|||||||++|+|++|..||.+.
T Consensus       192 ~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~  226 (396)
T 4eut_A          192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF  226 (396)
T ss_dssp             C--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECT
T ss_pred             cccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence                  46778999999999999999999999754

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=4.8e-28  Score=275.78  Aligned_cols=166  Identities=24%  Similarity=0.467  Sum_probs=141.2

Q ss_pred             CCCeeeeceecccCceEEEEEEEc---CCCcEEEEEEEecCC----cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCC
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVER---SSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKD  253 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k---~Tg~~vAIKiI~~~~----~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~  253 (1310)
                      .++|++.+.||+|+||.||+|.+.   .+|+.||||++....    ....+.+.+|+.+|+.+ +||||+++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            368999999999999999999985   589999999986432    12344567899999999 7999999999999999


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .+|||||||+||+|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+.
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kl~DfG~a~~~~  210 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG--HVVLTDFGLSKEFV  210 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--CEEESCSSEEEECC
T ss_pred             eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--cEEEeeCCCCeecc
Confidence            9999999999999999998878899999999999999999999999999999999999998655  89999999998764


Q ss_pred             CCC--CCCCcccchHHHh
Q psy5279         334 SFG--KLNPLEYDVRYVR  349 (1310)
Q Consensus       334 ~~~--~l~~~~~t~~yv~  349 (1310)
                      ...  .....++|+.|++
T Consensus       211 ~~~~~~~~~~~gt~~y~a  228 (355)
T 1vzo_A          211 ADETERAYDFCGTIEYMA  228 (355)
T ss_dssp             GGGGGGGCGGGSCCTTCC
T ss_pred             cCCCCcccCcccCcCccC
Confidence            321  2223445544443

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.95  E-value=8.8e-28  Score=273.21  Aligned_cols=196  Identities=14%  Similarity=0.152  Sum_probs=153.6

Q ss_pred             cCCCeeeeceecccCceEEEEE-----EEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC---CCCcceEEEEEEeC
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHA-----VERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC---HRNLVRLHDSYETK  252 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka-----~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~---HPNIVkL~d~f~~~  252 (1310)
                      ..+.|.+.+.||+|+||.||+|     .+..+++.||+|++...   ....+.+|+.+++.|+   ||||+++++++...
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~  139 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ  139 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence            3578999999999999999999     47789999999999754   3456778899988887   99999999999999


Q ss_pred             CeEEEEEecCCCCchHHHhhh-----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC---------CC
Q psy5279         253 DSFTIISELAGGGELLHSLTR-----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP---------GG  318 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~-----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~---------~~  318 (1310)
                      +..|||||||+||+|.+.+..     ...+++..+..++.||+.||+|||++|||||||||+|||++.+         ..
T Consensus       140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~  219 (365)
T 3e7e_A          140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLS  219 (365)
T ss_dssp             SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------C
T ss_pred             CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccccc
Confidence            999999999999999999863     4569999999999999999999999999999999999999761         13


Q ss_pred             CeEEEEeeccceeecC---CCCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhh
Q psy5279         319 RHLLLTDFGLSRRITS---FGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVR  393 (1310)
Q Consensus       319 ~~VKLsDFGLAr~i~~---~~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~  393 (1310)
                      ..+||+|||+|+.+..   .......+||+.|     .+|++..+.                 -++...| | .|+.+..
T Consensus       220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y-----~aPE~~~~~-----------------~~~~~~DiwslG~il~e  277 (365)
T 3e7e_A          220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGF-----QCVEMLSNK-----------------PWNYQIDYFGVAATVYC  277 (365)
T ss_dssp             TTEEECCCTTCEEGGGSCTTEEECCSSCTTSC-----CCHHHHTTC-----------------CBSTHHHHHHHHHHHHH
T ss_pred             CCEEEeeCchhhhhhccCCCceeeeecCCCCC-----CChHHhcCC-----------------CCCccccHHHHHHHHHH
Confidence            4899999999987642   2233445555544     445543221                 1344567 4 6677777


Q ss_pred             hcccCCCC
Q psy5279         394 RYYRRRPL  401 (1310)
Q Consensus       394 ~~~~r~~~  401 (1310)
                      .++.+.|.
T Consensus       278 lltg~~pf  285 (365)
T 3e7e_A          278 MLFGTYMK  285 (365)
T ss_dssp             HHHSSCCC
T ss_pred             HHhCCCcc
Confidence            77777653

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.95  E-value=1.2e-27  Score=276.32  Aligned_cols=209  Identities=22%  Similarity=0.344  Sum_probs=162.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC--eEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD--SFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~--~ly  256 (1310)
                      .+.++|.+.+.||+|+||.||+|.++.+|+.||||++.... ....+.+.+|+.+|++++|||||++++++...+  .+|
T Consensus         6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~   85 (396)
T 4eut_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV   85 (396)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred             CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence            45678999999999999999999999999999999997543 234566789999999999999999999998765  789


Q ss_pred             EEEecCCCCchHHHhhhcC---CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeec--CCCCeEEEEeecccee
Q psy5279         257 IISELAGGGELLHSLTRQS---YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH--PGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~---~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~--~~~~~VKLsDFGLAr~  331 (1310)
                      +|||||+||+|.+.+....   .+++..+..++.||+.||+|||++||+||||||+|||+..  ++...+||+|||+|+.
T Consensus        86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~  165 (396)
T 4eut_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (396)
T ss_dssp             EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred             EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence            9999999999999987543   2999999999999999999999999999999999999831  2334799999999998


Q ss_pred             ecCCCCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCC
Q psy5279         332 ITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       332 i~~~~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~  402 (1310)
                      ..........++|+.|+     +|++..+....         ......++...| | .|+.+...++.+.|..
T Consensus       166 ~~~~~~~~~~~gt~~y~-----aPE~~~~~~~~---------~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~  224 (396)
T 4eut_A          166 LEDDEQFVSLYGTEEYL-----HPDMYERAVLR---------KDHQKKYGATVDLWSIGVTFYHAATGSLPFR  224 (396)
T ss_dssp             CCCGGGSSCSSSCCTTC-----CHHHHHHHCC-----------CHHHHHHHHHHHHHHHHHHHHHHHSSCSEE
T ss_pred             ccCCCccccccCCcccc-----CHHHhhccccc---------cccccCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            76655555556665544     34432110000         000123455667 4 6777777777777654

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.95  E-value=8e-29  Score=280.43  Aligned_cols=154  Identities=16%  Similarity=0.148  Sum_probs=114.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc------cccCCCCCCcccccccc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL------IHPINTPNPEFAAPEVL 1021 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~------~~~~~tGtp~Y~APEvl 1021 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.++...+||+|||+++........      ......||+.|+|||++
T Consensus       161 ~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  240 (352)
T 2jii_A          161 VLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLH  240 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHH
Confidence            345678999999999999999999999999998633237999999999765432211      11223678999999999


Q ss_pred             cCCCCCCccchhHHHHHHHHHhcCCCCCCCCC--hhHHHhhhcc---ccccccc---cchhccHHHHHHHHHhcc-CCcc
Q psy5279        1022 AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS--EPETRQNVNF---VRYRFEY---LFKELTQEATRFLMLIFK-HEVD 1092 (1310)
Q Consensus      1022 ~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~--~~e~~~~I~~---~~~~f~~---~~~~lS~eakdLL~~il~-~~~~ 1092 (1310)
                      .+..++.++|||||||++|+|++|..||.+..  ..........   ....+..   .+..+++++.+|+.+|+. ++.+
T Consensus       241 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  320 (352)
T 2jii_A          241 KGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEE  320 (352)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTC
T ss_pred             ccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhh
Confidence            99999999999999999999999999998764  2222222211   1111111   123568999999999886 5677


Q ss_pred             hhcHHhhhC
Q psy5279        1093 WITLANNID 1101 (1310)
Q Consensus      1093 rit~~e~L~ 1101 (1310)
                      |+++.++++
T Consensus       321 Rps~~~l~~  329 (352)
T 2jii_A          321 KPPYAMLRN  329 (352)
T ss_dssp             CCCHHHHHH
T ss_pred             CCCHHHHHH
Confidence            988887653

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.95  E-value=9.8e-29  Score=305.25  Aligned_cols=104  Identities=25%  Similarity=0.419  Sum_probs=87.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++..+ ...+||+|||++........  .....|++.|+|||++.+..+
T Consensus       123 i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~  200 (676)
T 3qa8_A          123 IRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL--CTEFVGTLQYLAPELLEQKKY  200 (676)
T ss_dssp             HHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCC
T ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccc--cccccCCcccCChHHhccCCC
Confidence            345678999999999999999999999999998643 34589999999976543322  223457899999999999999


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      +.++|||||||++|+|++|..||.+..
T Consensus       201 s~ksDIwSLGviLyeLltG~~Pf~~~~  227 (676)
T 3qa8_A          201 TVTVDYWSFGTLAFECITGFRPFLPNW  227 (676)
T ss_dssp             STTHHHHHHHHHHHHHHSSCSSCCSSC
T ss_pred             CchhHHHHHHHHHHHHHHCCCCCCccc
Confidence            999999999999999999999998754

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.95  E-value=1.9e-29  Score=288.91  Aligned_cols=155  Identities=20%  Similarity=0.221  Sum_probs=123.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ...++.||+.||.|||++||+||||||+|||++..+ ...+||+|||+++.....+. ....+..+|+.|+|||++.+..
T Consensus       183 ~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  262 (367)
T 3l9p_A          183 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI  262 (367)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCC
Confidence            345678999999999999999999999999998532 34699999999875432211 1223345678999999999999


Q ss_pred             CCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHE 1103 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~ 1103 (1310)
                      ++.++|||||||++|+|++ |..||.+.+..+....+.....  ......++++..+|+.+|+. ++.+|+++.+++++-
T Consensus       263 ~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l  340 (367)
T 3l9p_A          263 FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR--MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI  340 (367)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence            9999999999999999998 9999999988887776654332  12235678899999999886 567799999988774


Q ss_pred             c
Q psy5279        1104 F 1104 (1310)
Q Consensus      1104 f 1104 (1310)
                      +
T Consensus       341 ~  341 (367)
T 3l9p_A          341 E  341 (367)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.95  E-value=1.2e-28  Score=282.13  Aligned_cols=222  Identities=13%  Similarity=0.064  Sum_probs=160.1

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC---CcchHHHHHHHH---HHHHhcCCCCcceEE-------
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNEL---DIMNQLCHRNLVRLH-------  246 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~---~~~~~~~~~rEI---~IL~~L~HPNIVkL~-------  246 (1310)
                      ...++|++.+.||+|+||.||+|.++.+|+.||||++...   .....+.+.+|+   .+|+.++|||||+++       
T Consensus        70 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~  149 (377)
T 3byv_A           70 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF  149 (377)
T ss_dssp             CCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred             CCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence            3457899999999999999999999999999999999743   234456788999   555666899999998       


Q ss_pred             EEEEeCCe-----------------EEEEEecCCCCchHHHhhhcCCCCH-------HHHHHHHHHHHHHHHHhhhCCee
Q psy5279         247 DSYETKDS-----------------FTIISELAGGGELLHSLTRQSYYTE-------YDIAHYIRQLLSGLDYMHRLSIA  302 (1310)
Q Consensus       247 d~f~~~~~-----------------lyLVmEy~~GGeL~~~l~~~~~lsE-------~~i~~ii~QIl~GL~YLHs~gIV  302 (1310)
                      ++++.++.                 .||||||+ +|+|.+.+...+.+++       ..+..++.||+.||+|||++||+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv  228 (377)
T 3byv_A          150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLV  228 (377)
T ss_dssp             EEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCee
Confidence            88877653                 89999999 6899999976555665       77778999999999999999999


Q ss_pred             ecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCCCcccchHHHh---------------------------------
Q psy5279         303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR---------------------------------  349 (1310)
Q Consensus       303 HRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~~~~~t~~yv~---------------------------------  349 (1310)
                      ||||||+|||++.++  .+||+|||+|+....  .....++ +.|++                                 
T Consensus       229 HrDikp~NIll~~~~--~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il  303 (377)
T 3byv_A          229 HTYLRPVDIVLDQRG--GVFLTGFEHLVRDGA--RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI  303 (377)
T ss_dssp             CSCCCGGGEEECTTC--CEEECCGGGCEETTC--EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred             cCCCCHHHEEEcCCC--CEEEEechhheecCC--cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence            999999999998665  899999999986432  1112222 22211                                 


Q ss_pred             ---hhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         350 ---QALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       350 ---~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                         ..++.||..........    ........+...+.|.+...+..+...|+++.+++.|||..
T Consensus       304 ~elltg~~Pf~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~  364 (377)
T 3byv_A          304 YWIWCADLPITKDAALGGSE----WIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE  364 (377)
T ss_dssp             HHHHHSSCCC------CCSG----GGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHH
T ss_pred             HHHHHCCCCCcccccccchh----hhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHH
Confidence               12344443211111000    00000112333446666677777889999999999999963

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.95  E-value=2.2e-28  Score=266.73  Aligned_cols=150  Identities=23%  Similarity=0.379  Sum_probs=133.4

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEe---------
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYET---------  251 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~---------  251 (1310)
                      +.++|++.+.||+|+||.||+|.+..+|+.||||++... ....+.+.+|+.+|+.++||||++++++|..         
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            456799999999999999999999999999999999642 2344668899999999999999999998865         


Q ss_pred             ----CCeEEEEEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEee
Q psy5279         252 ----KDSFTIISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF  326 (1310)
Q Consensus       252 ----~~~lyLVmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDF  326 (1310)
                          .+.+|+||||++||+|.+.+.... .+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+||
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~--~~kl~df  160 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESR--NVKIGDF  160 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--CEEECCC
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCC--CEEEeeC
Confidence                467899999999999999997544 488899999999999999999999999999999999997655  7999999


Q ss_pred             ccceeec
Q psy5279         327 GLSRRIT  333 (1310)
Q Consensus       327 GLAr~i~  333 (1310)
                      |+++...
T Consensus       161 g~~~~~~  167 (303)
T 1zy4_A          161 GLAKNVH  167 (303)
T ss_dssp             CCCSCTT
T ss_pred             cchhhcc
Confidence            9998764

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.95  E-value=2.4e-28  Score=267.45  Aligned_cols=153  Identities=25%  Similarity=0.439  Sum_probs=119.5

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ...++|++.+.||+|+||.||+|.+..+|+.||||++.... ....+.+.+|+.+|+.++||||+++++++...+.+++|
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            34578999999999999999999999999999999886543 23345678999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhh--------cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         259 SELAGGGELLHSLTR--------QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~--------~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      |||++||+|.+.+..        ...+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~  169 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG--SVQIADFGVSA  169 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTC--CEEECCCHHHH
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCC--CEEEEeccchh
Confidence            999999999988863        34599999999999999999999999999999999999998655  79999999998


Q ss_pred             eecC
Q psy5279         331 RITS  334 (1310)
Q Consensus       331 ~i~~  334 (1310)
                      ....
T Consensus       170 ~~~~  173 (303)
T 2vwi_A          170 FLAT  173 (303)
T ss_dssp             HCC-
T ss_pred             eecc
Confidence            6543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.95  E-value=4e-27  Score=260.44  Aligned_cols=226  Identities=23%  Similarity=0.370  Sum_probs=164.2

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ...+.|++.+.||+|+||.||+|.+..+|+.||+|++....  ....+.+|+.+|+.++||||+++++++...+.+|+||
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM  103 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence            46688999999999999999999999999999999997543  3456789999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhh-hcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-C
Q psy5279         260 ELAGGGELLHSLT-RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-K  337 (1310)
Q Consensus       260 Ey~~GGeL~~~l~-~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~  337 (1310)
                      ||+.||+|.+.+. ....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.+.... .
T Consensus       104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~kl~dfg~~~~~~~~~~~  181 (314)
T 3com_A          104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEG--HAKLADFGVAGQLTDTMAK  181 (314)
T ss_dssp             ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEECCCTTCEECBTTBSC
T ss_pred             ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCC--CEEEeecccchhhhhhccc
Confidence            9999999999886 345699999999999999999999999999999999999998655  79999999998765432 2


Q ss_pred             CCCcccchHHHhhh-------------------------cCCCccccCCCCC-----CCCCCCcchhhhhhhcccchhhc
Q psy5279         338 LNPLEYDVRYVRQA-------------------------LRHPWLNFADRKP-----TEDTPKLNTDALRNYYNLYKDWY  387 (1310)
Q Consensus       338 l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~-----~~~~p~~~~~~~~~~~~~~~D~~  387 (1310)
                      .....+|+.|.++.                         +..||........     ....+.+  .....+...+.+++
T Consensus       182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li  259 (314)
T 3com_A          182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTF--RKPELWSDNFTDFV  259 (314)
T ss_dssp             BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--SSGGGSCHHHHHHH
T ss_pred             cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCccc--CCcccCCHHHHHHH
Confidence            23334455444322                         2222211100000     0000000  00001122335556


Q ss_pred             hhhhhhhcccCCCCCCccCCCcce
Q psy5279         388 GNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       388 ~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ...+..+...|+++++++.|||..
T Consensus       260 ~~~l~~dp~~Rpt~~~ll~~~~~~  283 (314)
T 3com_A          260 KQCLVKSPEQRATATQLLQHPFVR  283 (314)
T ss_dssp             HHHTCSCTTTSCCHHHHTTSHHHH
T ss_pred             HHHccCChhhCcCHHHHHhCHHHh
Confidence            666667788999999999999974

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.95  E-value=3.6e-29  Score=273.39  Aligned_cols=149  Identities=17%  Similarity=0.220  Sum_probs=108.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++..............+++.|+|||++.+..++.
T Consensus       119 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  196 (281)
T 1mp8_A          119 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS  196 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE--TTEEEECC-------------------CCGGGCCHHHHHHCCCSH
T ss_pred             HHHHHHHHHHHHHHHhCCeecccccHHHEEECC--CCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCC
Confidence            345679999999999999999999999999986  457999999999766443332334455678999999999889999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++|||||||++|+|++ |..||.+.+..+....+.....  ......++++..+++.+|+. ++.+|+++.+.++
T Consensus       197 ~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  269 (281)
T 1mp8_A          197 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER--LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  269 (281)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999996 9999999887777665544321  12345788999999999886 5567888887654

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.95  E-value=2.3e-27  Score=272.21  Aligned_cols=153  Identities=25%  Similarity=0.385  Sum_probs=134.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEc-------CCCcEEEEEEEecCCc-chHHHHHHHHHHHHhc-CCCCcceEEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVER-------SSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQL-CHRNLVRLHDSYET  251 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k-------~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~  251 (1310)
                      ..++|++.+.||+|+||.||+|.+.       .++..||||++..... ...+.+.+|+.+|+.+ +|||||+++++|.+
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  158 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  158 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence            3478999999999999999999875       3556899999975432 3455688999999999 89999999999999


Q ss_pred             CCeEEEEEecCCCCchHHHhhhcC----------------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeec
Q psy5279         252 KDSFTIISELAGGGELLHSLTRQS----------------YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH  315 (1310)
Q Consensus       252 ~~~lyLVmEy~~GGeL~~~l~~~~----------------~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~  315 (1310)
                      .+.+|+||||++||+|.+.+....                .+++.++..++.||+.||+|||++||+||||||+|||++.
T Consensus       159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  238 (370)
T 2psq_A          159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE  238 (370)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT
T ss_pred             CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECC
Confidence            999999999999999999987542                4789999999999999999999999999999999999986


Q ss_pred             CCCCeEEEEeeccceeecCC
Q psy5279         316 PGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       316 ~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ++  .+||+|||+|+.+...
T Consensus       239 ~~--~~kl~DFG~a~~~~~~  256 (370)
T 2psq_A          239 NN--VMKIADFGLARDINNI  256 (370)
T ss_dssp             TC--CEEECCCSSCEETTCC
T ss_pred             CC--CEEEccccCCcccCcc
Confidence            55  8999999999977543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.95  E-value=6.6e-28  Score=265.81  Aligned_cols=166  Identities=23%  Similarity=0.383  Sum_probs=143.9

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ..+.|++.+.||+|+||.||+|.+..+|+.||+|++.... ....+.+.+|+.+|+.++||||+++++++...+.+|+||
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   99 (303)
T 3a7i_A           20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM   99 (303)
T ss_dssp             GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence            4577999999999999999999999999999999997553 234567889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l  338 (1310)
                      ||++|++|.+.+.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.+.... ..
T Consensus       100 e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~  176 (303)
T 3a7i_A          100 EYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG--EVKLADFGVAGQLTDTQIKR  176 (303)
T ss_dssp             ECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEEECCCTTCEECBTTBCCB
T ss_pred             EeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCC--CEEEeecccceecCcccccc
Confidence            99999999998864 5699999999999999999999999999999999999998655  79999999998875432 22


Q ss_pred             CCcccchHHHh
Q psy5279         339 NPLEYDVRYVR  349 (1310)
Q Consensus       339 ~~~~~t~~yv~  349 (1310)
                      ....+|+.|.+
T Consensus       177 ~~~~~~~~y~a  187 (303)
T 3a7i_A          177 NTFVGTPFWMA  187 (303)
T ss_dssp             CCCCSCGGGCC
T ss_pred             CccCCCcCccC
Confidence            33445555543

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.95  E-value=2.9e-29  Score=272.20  Aligned_cols=97  Identities=19%  Similarity=0.348  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++.........  ....|++.|+|||++.+..++.
T Consensus       125 ~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~  200 (284)
T 2a19_B          125 LELFEQITKGVDYIHSKKLINRDLKPSNIFLVD--TKQVKIGDFGLVTSLKNDGKR--TRSKGTLRYMSPEQISSQDYGK  200 (284)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE--TTEEEECCCTTCEESSCCSCC--CCCCSCCTTSCHHHHHCSCCCT
T ss_pred             HHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcC--CCCEEECcchhheeccccccc--cccCCcccccChhhhccCCCcc
Confidence            445779999999999999999999999999986  457999999998766543322  2335779999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPF 1049 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF 1049 (1310)
                      ++|||||||++|+|++|..||
T Consensus       201 ~~Di~slG~il~~l~~~~~~~  221 (284)
T 2a19_B          201 EVDLYALGLILAELLHVCDTA  221 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCSSH
T ss_pred             hhhhHHHHHHHHHHHhcCCcc
Confidence            999999999999999998876

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.95  E-value=2.5e-29  Score=278.45  Aligned_cols=151  Identities=14%  Similarity=0.160  Sum_probs=110.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccc-------------ccCCCCCCcc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI-------------HPINTPNPEF 1015 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~-------------~~~~tGtp~Y 1015 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||+++.........             .....||+.|
T Consensus       111 ~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  188 (310)
T 3s95_A          111 VSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRE--NKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW  188 (310)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSTTSEEECT--TSCEEECCCTTCEECC--------------------CCCCSCGGG
T ss_pred             HHHHHHHHHHHHHHHhCCccCCCCCcCeEEECC--CCCEEEeecccceecccccccccccccccccccccccccCCCcce
Confidence            345779999999999999999999999999975  4569999999997653322111             1134678999


Q ss_pred             cccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchh
Q psy5279        1016 AAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWI 1094 (1310)
Q Consensus      1016 ~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~ri 1094 (1310)
                      +|||++.+..++.++|||||||++|+|++|..||.........................++++..+++.+|+. ++.+|+
T Consensus       189 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp  268 (310)
T 3s95_A          189 MAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRP  268 (310)
T ss_dssp             CCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSC
T ss_pred             eCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCCCCCCHHHHHHHHHHccCChhhCc
Confidence            9999999999999999999999999999999999764332211111110111111235678889999999887 556788


Q ss_pred             cHHhhhC
Q psy5279        1095 TLANNID 1101 (1310)
Q Consensus      1095 t~~e~L~ 1101 (1310)
                      ++.++++
T Consensus       269 s~~~l~~  275 (310)
T 3s95_A          269 SFVKLEH  275 (310)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            8887664

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.95  E-value=3.1e-28  Score=281.43  Aligned_cols=153  Identities=24%  Similarity=0.460  Sum_probs=120.2

Q ss_pred             CccCCCeee-eceecccCceEEEEEEEc--CCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEe--CC
Q psy5279         179 KPITDAYDF-GDELGRGVTGIVYHAVER--SSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYET--KD  253 (1310)
Q Consensus       179 ~~~~d~Y~i-~~~LG~GsFG~Vyka~~k--~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~--~~  253 (1310)
                      ..+.+.|++ +++||+|+||.||+|.++  .+++.||||++....  ....+.+|+.+|+.|+|||||+++++|..  ..
T Consensus        16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   93 (405)
T 3rgf_A           16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADR   93 (405)
T ss_dssp             CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred             hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence            356677887 558999999999999977  578999999997542  23467899999999999999999999954  77


Q ss_pred             eEEEEEecCCCCchHHHhhhc---------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC--CCCeEE
Q psy5279         254 SFTIISELAGGGELLHSLTRQ---------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP--GGRHLL  322 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~---------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~--~~~~VK  322 (1310)
                      .+||||||+.| +|.+.+...         ..+++..++.++.||+.||.|||++||+||||||+|||+..+  ....+|
T Consensus        94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~k  172 (405)
T 3rgf_A           94 KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVK  172 (405)
T ss_dssp             EEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred             eEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEE
Confidence            89999999985 677666421         249999999999999999999999999999999999999432  234899


Q ss_pred             EEeeccceeecC
Q psy5279         323 LTDFGLSRRITS  334 (1310)
Q Consensus       323 LsDFGLAr~i~~  334 (1310)
                      |+|||+|+.+..
T Consensus       173 l~Dfg~a~~~~~  184 (405)
T 3rgf_A          173 IADMGFARLFNS  184 (405)
T ss_dssp             ECCTTCCC----
T ss_pred             EEECCCceecCC
Confidence            999999987653

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.95  E-value=2.8e-27  Score=262.07  Aligned_cols=166  Identities=19%  Similarity=0.378  Sum_probs=140.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEE-cCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCC------cceEEEEEEeC
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVE-RSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN------LVRLHDSYETK  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~-k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPN------IVkL~d~f~~~  252 (1310)
                      .+.++|++.+.||+|+||.||+|.+ +.+|+.||+|++... ....+.+.+|+.+|+.++|+|      |++++++|...
T Consensus        11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~   89 (339)
T 1z57_A           11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   89 (339)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence            5678999999999999999999998 568999999999643 234566889999999997765      99999999999


Q ss_pred             CeEEEEEecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-------------
Q psy5279         253 DSFTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-------------  317 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-------------  317 (1310)
                      +.+++||||+ +++|.+.+...+  .+++..+..++.||+.||+|||++||+||||||+|||++..+             
T Consensus        90 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~  168 (339)
T 1z57_A           90 GHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDE  168 (339)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred             CcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccccc
Confidence            9999999999 889999887665  589999999999999999999999999999999999997643             


Q ss_pred             ----CCeEEEEeeccceeecCCCCCCCcccchHHHh
Q psy5279         318 ----GRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       318 ----~~~VKLsDFGLAr~i~~~~~l~~~~~t~~yv~  349 (1310)
                          +..+||+|||+|+.....  ....++|+.|.+
T Consensus       169 ~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~a  202 (339)
T 1z57_A          169 RTLINPDIKVVDFGSATYDDEH--HSTLVSTRHYRA  202 (339)
T ss_dssp             EEESCCCEEECCCSSCEETTSC--CCSSCSCGGGCC
T ss_pred             ccccCCCceEeeCcccccCccc--cccccCCccccC
Confidence                347999999999875432  234455655543

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.95  E-value=1.4e-27  Score=261.71  Aligned_cols=148  Identities=27%  Similarity=0.439  Sum_probs=130.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|++.+.||+|+||.||+|.++.+|+.||+|++....  ......+.+|+.+|++++||||+++++++..++.+|+|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            57999999999999999999999999999999986542  2234668899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         261 LAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       261 y~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |+. |+|.+.+...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~kl~dfg~~~~~~  154 (299)
T 2r3i_A           83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLADFGLARAFG  154 (299)
T ss_dssp             CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--CEEECSTTHHHHHC
T ss_pred             ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCC--CEEECcchhhhhcc
Confidence            998 5888888654  4589999999999999999999999999999999999998655  79999999998764

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.95  E-value=2.1e-28  Score=269.02  Aligned_cols=151  Identities=26%  Similarity=0.480  Sum_probs=129.2

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC----cchHHHHHHHHHHHHhcCCCCcceEEEEE--EeCCe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQLCHRNLVRLHDSY--ETKDS  254 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~----~~~~~~~~rEI~IL~~L~HPNIVkL~d~f--~~~~~  254 (1310)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|++....    ......+.+|+.+|+.++||||+++++++  ...+.
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence            4578999999999999999999999999999999997532    23456788999999999999999999998  45568


Q ss_pred             EEEEEecCCCCchHHHhhh--cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         255 FTIISELAGGGELLHSLTR--QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~--~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      +|+||||+.+| |.+.+..  ...+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++..
T Consensus        83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~--~~kl~dfg~~~~~  159 (305)
T 2wtk_C           83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGG--TLKISALGVAEAL  159 (305)
T ss_dssp             EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC--CEEECCCTTCEEC
T ss_pred             EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCC--cEEeecccccccc
Confidence            99999999987 5555543  34699999999999999999999999999999999999998655  7999999999876


Q ss_pred             cC
Q psy5279         333 TS  334 (1310)
Q Consensus       333 ~~  334 (1310)
                      ..
T Consensus       160 ~~  161 (305)
T 2wtk_C          160 HP  161 (305)
T ss_dssp             CT
T ss_pred             Cc
Confidence            53

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.95  E-value=5.7e-29  Score=278.07  Aligned_cols=102  Identities=24%  Similarity=0.375  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++........  .......+++.|+|||++.+..+
T Consensus       130 ~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  207 (327)
T 3lxl_A          130 LLYSSQICKGMEYLGSRRCVHRDLAARNILVES--EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF  207 (327)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE--TTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHHHhCCccCCCCChhhEEECC--CCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCC
Confidence            445779999999999999999999999999986  45799999999986643222  12233456788999999999889


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      +.++|||||||++|+|++|..||...
T Consensus       208 ~~~~Di~slG~il~~ll~g~~p~~~~  233 (327)
T 3lxl_A          208 SRQSDVWSFGVVLYELFTYCDKSCSP  233 (327)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred             ChHHhHHHHHHHHHHHHhCCCCCccc
Confidence            99999999999999999999999653

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.95  E-value=1e-27  Score=268.95  Aligned_cols=151  Identities=22%  Similarity=0.325  Sum_probs=134.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc-----------------hHHHHHHHHHHHHhcCCCCc
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-----------------YKSLFKNELDIMNQLCHRNL  242 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~-----------------~~~~~~rEI~IL~~L~HPNI  242 (1310)
                      .+.++|++.+.||+|+||.||+|.+  +|+.||+|++......                 ..+.+.+|+.+|+.|+||||
T Consensus        28 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i  105 (348)
T 2pml_X           28 KYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC  105 (348)
T ss_dssp             EEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred             cccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence            4568999999999999999999998  9999999998643111                 11778999999999999999


Q ss_pred             ceEEEEEEeCCeEEEEEecCCCCchHHH------hhh--cCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEe
Q psy5279         243 VRLHDSYETKDSFTIISELAGGGELLHS------LTR--QSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLV  313 (1310)
Q Consensus       243 VkL~d~f~~~~~lyLVmEy~~GGeL~~~------l~~--~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL  313 (1310)
                      +++++++...+.+|+||||++||+|.+.      +..  ...+++..+..++.||+.||.|||+ +||+||||||+|||+
T Consensus       106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~  185 (348)
T 2pml_X          106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM  185 (348)
T ss_dssp             CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEE
T ss_pred             ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEE
Confidence            9999999999999999999999999888      655  4669999999999999999999999 999999999999999


Q ss_pred             ecCCCCeEEEEeeccceeecC
Q psy5279         314 AHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       314 ~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +.++  .+||+|||+++....
T Consensus       186 ~~~~--~~kl~dfg~~~~~~~  204 (348)
T 2pml_X          186 DKNG--RVKLSDFGESEYMVD  204 (348)
T ss_dssp             CTTS--CEEECCCTTCEECBT
T ss_pred             cCCC--cEEEecccccccccc
Confidence            8655  899999999987644

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.95  E-value=4.6e-29  Score=272.15  Aligned_cols=252  Identities=17%  Similarity=0.238  Sum_probs=198.3

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchhh
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAV  673 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  673 (1310)
                      ..+.|++...|.+|.||.|.+|..+. ++..||.|.+........++..|...|+.|+|++|..+++.+...    +...
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~~~   85 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE----PPFY   85 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGG-GTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSS----SSEE
T ss_pred             cccceeEEeecCCCCceeEEEeEecC-CCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC----CCEE
Confidence            56789999999999999999987665 788999999998888889999999999999999999999988655    4568


Q ss_pred             HHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccccccccCC
Q psy5279         674 LVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWEDN  753 (1310)
Q Consensus       674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  753 (1310)
                      +|||++.|.++..++.....-                                                           
T Consensus        86 ~v~e~~~~~~L~~~~~~~~~~-----------------------------------------------------------  106 (288)
T 3kfa_A           86 IITEFMTYGNLLDYLRECNRQ-----------------------------------------------------------  106 (288)
T ss_dssp             EEEECCTTEEHHHHHHHCCTT-----------------------------------------------------------
T ss_pred             EEEEcCCCCcHHHHHHhcccC-----------------------------------------------------------
Confidence            999999998876665311000                                                           


Q ss_pred             CCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcchhhh
Q psy5279         754 VPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVIRE  833 (1310)
Q Consensus       754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  833 (1310)
                                                                                                      
T Consensus       107 --------------------------------------------------------------------------------  106 (288)
T 3kfa_A          107 --------------------------------------------------------------------------------  106 (288)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEEE
Q psy5279         834 RRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLEM  913 (1310)
Q Consensus       834 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~~  913 (1310)
                                                                                                      
T Consensus       107 --------------------------------------------------------------------------------  106 (288)
T 3kfa_A          107 --------------------------------------------------------------------------------  106 (288)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeec
Q psy5279         914 KCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLG  993 (1310)
Q Consensus       914 ~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFG  993 (1310)
                                                  .........++.||+.||.|||++||+||||||+|||++.  +..+||+|||
T Consensus       107 ----------------------------~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~--~~~~~l~Dfg  156 (288)
T 3kfa_A          107 ----------------------------EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFG  156 (288)
T ss_dssp             ----------------------------TSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECG--GGCEEECCCC
T ss_pred             ----------------------------CccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcC--CCCEEEccCc
Confidence                                        0001113456789999999999999999999999999975  4569999999


Q ss_pred             cceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccc
Q psy5279         994 CTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLF 1072 (1310)
Q Consensus       994 lAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~ 1072 (1310)
                      ++...............+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+.......+.... .. ...
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~-~~-~~~  234 (288)
T 3kfa_A          157 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY-RM-ERP  234 (288)
T ss_dssp             GGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-CC-CCC
T ss_pred             cceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccC-CC-CCC
Confidence            987654333222223345678999999999999999999999999999999 999999888776665544321 11 223


Q ss_pred             hhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1073 KELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1073 ~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ..++++..+|+..|+. ++.+|+++.++++
T Consensus       235 ~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence            5678999999999887 5567888887653

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.95  E-value=7.6e-29  Score=275.71  Aligned_cols=148  Identities=17%  Similarity=0.216  Sum_probs=105.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++...............|++.|+|||++.+..++.
T Consensus       137 ~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  214 (309)
T 2h34_A          137 VAIVRQIGSALDAAHAAGATHRDVKPENILVSA--DDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATY  214 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT--TSCEEECSCCC----------------CCGGGCCGGGTCC----C
T ss_pred             HHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcC--CCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCc
Confidence            345679999999999999999999999999975  457999999998765432222222335779999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccC-Ccchh-cHHh
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKH-EVDWI-TLAN 1098 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~-~~~ri-t~~e 1098 (1310)
                      ++|||||||++|+|++|..||.+.+.......+.............++++..++|.+|+.. +.+|+ ++.+
T Consensus       215 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~  286 (309)
T 2h34_A          215 RADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGD  286 (309)
T ss_dssp             CCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHH
T ss_pred             hHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHH
Confidence            9999999999999999999999877665544444333333334567889999999998874 56677 4444

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.95  E-value=2.8e-27  Score=266.01  Aligned_cols=152  Identities=24%  Similarity=0.334  Sum_probs=136.1

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCc---EEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGR---NYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~---~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ..++|++.+.||+|+||.||+|.++.+|+   .||||++.... ....+.+.+|+.+|+.|+|||||+++++|.+.+.+|
T Consensus        47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  126 (325)
T 3kul_A           47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM  126 (325)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred             ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence            45789999999999999999999987665   49999997543 344567899999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         257 IISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||||++||+|.+.+... +.+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus       127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~  203 (325)
T 3kul_A          127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNL--VCKVSDFGLSRVLED  203 (325)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC--CEEECCCSSCEECC-
T ss_pred             EEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCC--CEEECCCCccccccc
Confidence            999999999999998654 5699999999999999999999999999999999999997654  899999999998754

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.95  E-value=3.4e-29  Score=279.55  Aligned_cols=100  Identities=23%  Similarity=0.349  Sum_probs=80.0

Q ss_pred             HHHHHHHHHHHHHHHC---------CceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-------ccccCCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWR---------GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-------LIHPINTPNP 1013 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~---------gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-------~~~~~~tGtp 1013 (1310)
                      .++.||+.||.|||++         ||+||||||+|||++.  ++.+||+|||+++.......       .......||+
T Consensus       115 ~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~--~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~  192 (336)
T 3g2f_A          115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN--DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTI  192 (336)
T ss_dssp             HHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECT--TSCEEECCCTTCEECSSSSCC---------CCTTSCG
T ss_pred             HHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcC--CCcEEEeeccceeecccccccCccccccccccCCCcc
Confidence            3467999999999999         9999999999999985  45799999999976543211       1112335789


Q ss_pred             cccccccccC-------CCCCCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1014 EFAAPEVLAE-------EPIFPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1014 ~Y~APEvl~~-------~~ys~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      .|+|||++.+       ..++.++|||||||++|+|++|..||..
T Consensus       193 ~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~  237 (336)
T 3g2f_A          193 RYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP  237 (336)
T ss_dssp             GGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred             ceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence            9999999987       3556789999999999999999776643

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.95  E-value=2.7e-29  Score=280.64  Aligned_cols=151  Identities=18%  Similarity=0.265  Sum_probs=119.5

Q ss_pred             hHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCC
Q psy5279         947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       947 ~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ....++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++....... .......+++.|+|||++.+..
T Consensus       175 ~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  252 (343)
T 1luf_A          175 EQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGE--NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNR  252 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG--GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECC--CCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCC
Confidence            35567889999999999999999999999999985  45699999999875432211 1122334678899999999889


Q ss_pred             CCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++.++|||||||++|+|++ |..||.+.+..+....+.....  +.....++++..+++.+|+. ++.+|+++.++++
T Consensus       253 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~  328 (343)
T 1luf_A          253 YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI--LACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  328 (343)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCc--CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            9999999999999999999 9999999888777766654332  22335688999999999887 5667888887654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.95  E-value=5.4e-27  Score=256.24  Aligned_cols=149  Identities=28%  Similarity=0.443  Sum_probs=131.1

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      |.....||+|+||.||+|.+..+++.||+|++........+.+.+|+.+|+.++|||||++++++...+.+++||||++|
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  103 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG  103 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence            34445899999999999999999999999999876655667789999999999999999999999999999999999999


Q ss_pred             CchHHHhhhc---CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         265 GELLHSLTRQ---SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       265 GeL~~~l~~~---~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+|.+.+...   ..+++..+..++.||+.||.|||++||+||||||+|||++..+ ..+||+|||+++....
T Consensus       104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-~~~kl~Dfg~~~~~~~  175 (295)
T 2clq_A          104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYS-GVLKISDFGTSKRLAG  175 (295)
T ss_dssp             EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT-CCEEECCTTTCEESCC
T ss_pred             CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCC-CCEEEeecccccccCC
Confidence            9999988754   2467889999999999999999999999999999999998622 3799999999987654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.95  E-value=4.4e-29  Score=284.17  Aligned_cols=153  Identities=18%  Similarity=0.167  Sum_probs=114.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc------cccCCCCCCccccccccc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL------IHPINTPNPEFAAPEVLA 1022 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~------~~~~~tGtp~Y~APEvl~ 1022 (1310)
                      ..++.||+.||.|||++||+||||||+|||++......+||+|||+++.....+..      ......||+.|+|||++.
T Consensus       155 ~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  234 (364)
T 3op5_A          155 LQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHN  234 (364)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhC
Confidence            45677999999999999999999999999998544678999999999765432211      112345889999999999


Q ss_pred             CCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcccc--ccccccc------hhccHHHHHHHHHhcc-CCcch
Q psy5279        1023 EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR--YRFEYLF------KELTQEATRFLMLIFK-HEVDW 1093 (1310)
Q Consensus      1023 ~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~--~~f~~~~------~~lS~eakdLL~~il~-~~~~r 1093 (1310)
                      +..++.++|||||||++|+|++|..||.+..............  ...+...      ..++++..+++..++. ++.+|
T Consensus       235 ~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  314 (364)
T 3op5_A          235 GVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEK  314 (364)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCC
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCC
Confidence            9999999999999999999999999998643332221111111  1111111      4568899999998886 56778


Q ss_pred             hcHHhhhC
Q psy5279        1094 ITLANNID 1101 (1310)
Q Consensus      1094 it~~e~L~ 1101 (1310)
                      +++.++++
T Consensus       315 P~~~~l~~  322 (364)
T 3op5_A          315 PLYENLRD  322 (364)
T ss_dssp             CCHHHHHH
T ss_pred             CCHHHHHH
Confidence            88877553

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.95  E-value=6.9e-29  Score=279.07  Aligned_cols=149  Identities=18%  Similarity=0.285  Sum_probs=116.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++.......  .......+|+.|+|||++.+..+
T Consensus       154 ~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  231 (325)
T 3kul_A          154 VGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS--NLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTF  231 (325)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--TCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHHHHCCeeCCCCCcceEEECC--CCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCC
Confidence            445779999999999999999999999999975  56799999999986543221  12223345678999999998899


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|||||||++|+|++ |..||.+.+..+....+.... ..+ ....+++++.+++..|+. ++.+|+++.++++
T Consensus       232 ~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          232 SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY-RLP-APMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC-CCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-CCC-CCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            999999999999999999 999999988887776654431 111 235678999999999886 5567888887663

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=5.1e-29  Score=268.42  Aligned_cols=150  Identities=19%  Similarity=0.277  Sum_probs=117.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++...............+++.|+|||++.+..++.
T Consensus       107 ~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  184 (267)
T 3t9t_A          107 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE--NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS  184 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECG--GGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCchheEEECC--CCCEEEcccccccccccccccccccccccccccChhhhcCCCccc
Confidence            345679999999999999999999999999975  456999999998755322111222334567899999999888999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++|||||||++|+|++ |..||.+.+..+....+.....  .......+++..+++.+|+. ++.+|+++.+.+++
T Consensus       185 ~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          185 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR--LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCc--CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            9999999999999999 9999999888777666544321  11234578899999999887 56678888887643

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.95  E-value=2.2e-27  Score=267.97  Aligned_cols=228  Identities=23%  Similarity=0.305  Sum_probs=156.8

Q ss_pred             ccCCCeeeec-eecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEe----CCe
Q psy5279         180 PITDAYDFGD-ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYET----KDS  254 (1310)
Q Consensus       180 ~~~d~Y~i~~-~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~----~~~  254 (1310)
                      .+.++|.+.+ .||+|+||.||+|.++.+|+.||||++...    ..........++.+.||||++++++|..    ...
T Consensus        25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~  100 (336)
T 3fhr_A           25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRC  100 (336)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence            5778999965 699999999999999999999999999643    1222223344677899999999999987    556


Q ss_pred             EEEEEecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeecccee
Q psy5279         255 FTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRR  331 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr~  331 (1310)
                      +++|||||+||+|.+.+....  .+++.++..++.||+.||.|||++||+||||||+|||++.++ ...+||+|||+|+.
T Consensus       101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~  180 (336)
T 3fhr_A          101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE  180 (336)
T ss_dssp             EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence            899999999999999997653  599999999999999999999999999999999999997643 34699999999987


Q ss_pred             ecCCCCCCCcccchHHHhh-------------------------hcCCCccccCCCCCCC--------CCCCcchhhhhh
Q psy5279         332 ITSFGKLNPLEYDVRYVRQ-------------------------ALRHPWLNFADRKPTE--------DTPKLNTDALRN  378 (1310)
Q Consensus       332 i~~~~~l~~~~~t~~yv~~-------------------------~~r~P~l~~~~~~~~~--------~~p~~~~~~~~~  378 (1310)
                      .... .....++|+.|+++                         .+..||..........        ............
T Consensus       181 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (336)
T 3fhr_A          181 TTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSE  259 (336)
T ss_dssp             C-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTT
T ss_pred             cccc-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhcc
Confidence            6532 22333444444332                         2344553322111000        000000111112


Q ss_pred             hcccchhhchhhhhhhcccCCCCCCccCCCccee
Q psy5279         379 YYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       379 ~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      +...+.+.+...+..+...|+++.+++.|||...
T Consensus       260 ~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  293 (336)
T 3fhr_A          260 VSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ  293 (336)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcCccccc
Confidence            3344466666667777899999999999999743

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.94  E-value=7.1e-29  Score=280.45  Aligned_cols=153  Identities=17%  Similarity=0.119  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc------cccCCCCCCccccccccc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL------IHPINTPNPEFAAPEVLA 1022 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~------~~~~~tGtp~Y~APEvl~ 1022 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.++...+||+|||+++.....+..      ......||+.|+|||++.
T Consensus       154 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  233 (345)
T 2v62_A          154 LQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHK  233 (345)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhc
Confidence            34567999999999999999999999999998755458999999999765432211      113346789999999999


Q ss_pred             CCCCCCccchhHHHHHHHHHhcCCCCCCCCC--hhHHHhhhcccccccccc----c--hhccHHHHHHHHHhcc-CCcch
Q psy5279        1023 EEPIFPQTDVWSAGVLAYVLLSGASPFRGQS--EPETRQNVNFVRYRFEYL----F--KELTQEATRFLMLIFK-HEVDW 1093 (1310)
Q Consensus      1023 ~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~--~~e~~~~I~~~~~~f~~~----~--~~lS~eakdLL~~il~-~~~~r 1093 (1310)
                      +..++.++|||||||++|+|++|..||.+..  ..............++..    .  ..++++.++++..|+. ++.+|
T Consensus       234 ~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  313 (345)
T 2v62_A          234 GVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEK  313 (345)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCC
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccC
Confidence            9999999999999999999999999996632  222211111111112211    1  1678899999999886 56778


Q ss_pred             hcHHhhhC
Q psy5279        1094 ITLANNID 1101 (1310)
Q Consensus      1094 it~~e~L~ 1101 (1310)
                      +++.++++
T Consensus       314 ps~~~l~~  321 (345)
T 2v62_A          314 PNYQALKK  321 (345)
T ss_dssp             CCHHHHHH
T ss_pred             CCHHHHHH
Confidence            88887653

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.94  E-value=2.2e-27  Score=267.29  Aligned_cols=152  Identities=24%  Similarity=0.371  Sum_probs=133.7

Q ss_pred             cCCCeeeeceecccCceEEEEEE-----EcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhc-CCCCcceEEEEEEeCC
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAV-----ERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQL-CHRNLVRLHDSYETKD  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~-----~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~  253 (1310)
                      ..++|++.+.||+|+||.||+|.     +..+++.||||++..... ...+.+.+|+.+|+++ +|||||+++++|...+
T Consensus        20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~   99 (359)
T 3vhe_A           20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   99 (359)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence            45789999999999999999999     566779999999976433 3445688999999999 8999999999998865


Q ss_pred             e-EEEEEecCCCCchHHHhhhcCC--------------------------------------------------------
Q psy5279         254 S-FTIISELAGGGELLHSLTRQSY--------------------------------------------------------  276 (1310)
Q Consensus       254 ~-lyLVmEy~~GGeL~~~l~~~~~--------------------------------------------------------  276 (1310)
                      . +++|||||+||+|.+.+.....                                                        
T Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (359)
T 3vhe_A          100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  179 (359)
T ss_dssp             SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred             CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence            4 9999999999999999875432                                                        


Q ss_pred             ----------CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         277 ----------YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       277 ----------lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                                +++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus       180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~--~~kl~Dfg~a~~~~~  245 (359)
T 3vhe_A          180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN--VVKICDFGLARDIYK  245 (359)
T ss_dssp             ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--CEEECCCGGGSCTTS
T ss_pred             ccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC--cEEEEeccceeeecc
Confidence                      89999999999999999999999999999999999998655  799999999987644

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.94  E-value=8e-29  Score=274.93  Aligned_cols=151  Identities=17%  Similarity=0.228  Sum_probs=120.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++....... .......+++.|+|||++.+..+
T Consensus       140 ~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  217 (322)
T 1p4o_A          140 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVF  217 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECT--TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCccceEEEcC--CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCC
Confidence            4456789999999999999999999999999985  45799999999875533221 12223445788999999999899


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|||||||++|+|++ |..||.+.+..+....+.....  ......++++..+++.+|+. ++.+|+++.+++.+
T Consensus       218 ~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          218 TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL--LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            999999999999999999 8999999887777666544322  22345788999999999887 56689999888765

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.94  E-value=8.8e-29  Score=270.35  Aligned_cols=158  Identities=24%  Similarity=0.435  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC--C
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP--I 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~--y 1026 (1310)
                      ..++.||+.||.|||++||+||||||+|||++. .+..+||+|||++........ ......|++.|+|||++.+..  +
T Consensus       125 ~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~-~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  202 (295)
T 2clq_A          125 GFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKGPRGY  202 (295)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET-TTCCEEECCTTTCEESCC------CCCCCCGGGCCHHHHHHGGGGC
T ss_pred             HHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC-CCCCEEEeecccccccCCCCC-cccccCCCccccChhhhcCCCCCC
Confidence            445779999999999999999999999999975 245799999999876543221 122345789999999997654  7


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHH-hhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCc
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETR-QNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEF 1104 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~-~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f 1104 (1310)
                      +.++|||||||++|+|++|..||.+....... ...... ...+.....+++++.+++.+|+. ++.+|+++.+++.|+|
T Consensus       203 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~  281 (295)
T 2clq_A          203 GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF-KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEF  281 (295)
T ss_dssp             SHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHH-CCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGG
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccc-cccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence            88999999999999999999999765433221 111110 11123345788999999999886 5678999999999999


Q ss_pred             ccccc
Q psy5279        1105 WHVKD 1109 (1310)
Q Consensus      1105 ~~~~~ 1109 (1310)
                      +....
T Consensus       282 ~~~~~  286 (295)
T 2clq_A          282 LKVSS  286 (295)
T ss_dssp             GCC--
T ss_pred             hhhcc
Confidence            87543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.94  E-value=8.5e-29  Score=277.41  Aligned_cols=153  Identities=14%  Similarity=0.200  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCC---CcEEEEeeccceeeccCCcc------cccCCCCCCccccc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS---VQVKLIDLGCTQRVTKLGTL------IHPINTPNPEFAAP 1018 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~---~~VKL~DFGlAk~~~~~g~~------~~~~~tGtp~Y~AP 1018 (1310)
                      +..++.||+.||+|||++||+||||||+|||++..+.   ..+||+|||+++........      ......||+.|+||
T Consensus       107 ~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  186 (330)
T 2izr_A          107 VLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSI  186 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCH
T ss_pred             HHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccCh
Confidence            3456789999999999999999999999999986331   23999999999865432211      12345678999999


Q ss_pred             ccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChh---HHHhhhcccccccc--ccchhccHHHHHHHHHhcc-CCcc
Q psy5279        1019 EVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEP---ETRQNVNFVRYRFE--YLFKELTQEATRFLMLIFK-HEVD 1092 (1310)
Q Consensus      1019 Evl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~---e~~~~I~~~~~~f~--~~~~~lS~eakdLL~~il~-~~~~ 1092 (1310)
                      |++.+..++.++|||||||++|+|++|..||.+.+..   +....+.......+  ......+ +..+++..|+. ++.+
T Consensus       187 E~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~  265 (330)
T 2izr_A          187 NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFE  265 (330)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTC
T ss_pred             HHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999999999985443   33333332222222  1122234 89999998886 5677


Q ss_pred             hhcHHhhhC
Q psy5279        1093 WITLANNID 1101 (1310)
Q Consensus      1093 rit~~e~L~ 1101 (1310)
                      |++..++..
T Consensus       266 RP~~~~l~~  274 (330)
T 2izr_A          266 KPDYDYLRK  274 (330)
T ss_dssp             CCCHHHHHH
T ss_pred             CCCHHHHHH
Confidence            888776553

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.94  E-value=1e-28  Score=272.04  Aligned_cols=153  Identities=16%  Similarity=0.257  Sum_probs=117.6

Q ss_pred             hHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCC
Q psy5279         947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       947 ~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ....++.||+.||.|||++||+||||||+|||++.  +..+||+|||++......... ......+++.|+|||++.+..
T Consensus       146 ~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  223 (313)
T 1t46_A          146 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV  223 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEET--TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcC--CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCC
Confidence            35567889999999999999999999999999975  567999999998765433221 122233567899999999999


Q ss_pred             CCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++.++|||||||++|+|++ |..||.+................. .....+++++.+++.+|+. ++.+|+++.+++++
T Consensus       224 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          224 YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM-LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCC-CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            9999999999999999998 999998876544433322222221 1235678999999999887 56679998887653

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=7.3e-29  Score=278.18  Aligned_cols=153  Identities=18%  Similarity=0.283  Sum_probs=118.6

Q ss_pred             hHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCC
Q psy5279         947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       947 ~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ....++.||+.||.|||++||+||||||+|||++.  +..+||+|||++......... ......+++.|+|||++.+..
T Consensus       173 ~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  250 (344)
T 1rjb_A          173 DLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH--GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI  250 (344)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEET--TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcC--CCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCC
Confidence            35667889999999999999999999999999985  567999999999765432221 122233567899999999999


Q ss_pred             CCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++.++|||||||++|+|++ |..||.+.........+.......+ ....++++..+++.+|+. ++.+|+++.+++.|
T Consensus       251 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          251 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMD-QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCC-CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            9999999999999999998 9999998765544333322222222 234678999999999887 56679999887765

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.94  E-value=2.2e-28  Score=291.74  Aligned_cols=257  Identities=19%  Similarity=0.272  Sum_probs=200.8

Q ss_pred             CccccCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCC
Q psy5279         587 IEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPST  666 (1310)
Q Consensus       587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  666 (1310)
                      -.|.  -+.+.|++...|.+|.||.|.+|..+. ++..||.|.+........++..|...|+.|+|+||..+++.+... 
T Consensus       213 ~~~~--~~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-  288 (495)
T 1opk_A          213 DKWE--MERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-  288 (495)
T ss_dssp             SCCB--CCGGGEEEEEESGGGTTSSEEEEEEGG-GTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred             cccc--cCHHHceeeeEecCCCCeEEEEEEEcC-CCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecC-
Confidence            3453  346779999999999999999987664 788999999988887888999999999999999999999988654 


Q ss_pred             cccchhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccc
Q psy5279         667 TASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRD  746 (1310)
Q Consensus       667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  746 (1310)
                         ....||||++.|.++..+|.....-                               .                    
T Consensus       289 ---~~~~lv~E~~~~g~L~~~l~~~~~~-------------------------------~--------------------  314 (495)
T 1opk_A          289 ---PPFYIITEFMTYGNLLDYLRECNRQ-------------------------------E--------------------  314 (495)
T ss_dssp             ---SSCEEEEECCTTCBHHHHHHHSCTT-------------------------------T--------------------
T ss_pred             ---CcEEEEEEccCCCCHHHHHHhcCcC-------------------------------C--------------------
Confidence               4567999999999887776421100                               0                    


Q ss_pred             cccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCC
Q psy5279         747 VKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDW  826 (1310)
Q Consensus       747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  826 (1310)
                                                                                                      
T Consensus       315 --------------------------------------------------------------------------------  314 (495)
T 1opk_A          315 --------------------------------------------------------------------------------  314 (495)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeee
Q psy5279         827 KAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVV  906 (1310)
Q Consensus       827 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~  906 (1310)
                                                                                                      
T Consensus       315 --------------------------------------------------------------------------------  314 (495)
T 1opk_A          315 --------------------------------------------------------------------------------  314 (495)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCc
Q psy5279         907 IGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQ  986 (1310)
Q Consensus       907 ~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~  986 (1310)
                                                          ........++.||+.||.|||++||+||||||+|||++.  +..
T Consensus       315 ------------------------------------~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~--~~~  356 (495)
T 1opk_A          315 ------------------------------------VSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGE--NHL  356 (495)
T ss_dssp             ------------------------------------SCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG--GGC
T ss_pred             ------------------------------------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECC--CCc
Confidence                                                000113445779999999999999999999999999975  456


Q ss_pred             EEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhcccc
Q psy5279         987 VKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVR 1065 (1310)
Q Consensus       987 VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~ 1065 (1310)
                      +||+|||+++..............+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+... 
T Consensus       357 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-  435 (495)
T 1opk_A          357 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-  435 (495)
T ss_dssp             EEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-
T ss_pred             EEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-
Confidence            9999999998654332222223345678999999998899999999999999999999 99999998877766655432 


Q ss_pred             ccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1066 YRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1066 ~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++.+ ....+++++.+|+.+|+. ++.+|+++.++++
T Consensus       436 ~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          436 YRME-RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             CCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCC-CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            2221 235678999999999887 5567888887653

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.94  E-value=2.1e-28  Score=281.03  Aligned_cols=152  Identities=20%  Similarity=0.281  Sum_probs=122.4

Q ss_pred             hHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCC
Q psy5279         947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       947 ~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ....++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++....... .......+++.|+|||++.+..
T Consensus       192 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  269 (382)
T 3tt0_A          192 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI  269 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT--TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcC--CCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCC
Confidence            35567889999999999999999999999999975  45799999999976543221 2233445678899999999999


Q ss_pred             CCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++.++|||||||++|+|++ |..||.+.+..+....+.....  ......+++++.+|+.+|+. ++.+|+++.+++++
T Consensus       270 ~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          270 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR--MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC--CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999 9999999888777666544321  12235678999999999887 56679999887764

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.94  E-value=2.6e-27  Score=260.07  Aligned_cols=153  Identities=22%  Similarity=0.360  Sum_probs=134.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEE----EcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--C
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAV----ERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--D  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~----~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~  253 (1310)
                      -..++|++.+.||+|+||.||+|.    +..+|+.||||++........+.+.+|+.+|++++||||+++++++...  .
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   86 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR   86 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence            345789999999999999999998    5678999999999866555567789999999999999999999998654  5


Q ss_pred             eEEEEEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         254 SFTIISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      .+++||||++||+|.+.+.... .+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+..
T Consensus        87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~--~~kl~Dfg~~~~~  164 (295)
T 3ugc_A           87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN--RVKIGDFGLTKVL  164 (295)
T ss_dssp             SCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT--EEEECCCCSCC--
T ss_pred             ceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCC--eEEEccCcccccc
Confidence            6999999999999999997654 499999999999999999999999999999999999998765  8999999999877


Q ss_pred             cC
Q psy5279         333 TS  334 (1310)
Q Consensus       333 ~~  334 (1310)
                      ..
T Consensus       165 ~~  166 (295)
T 3ugc_A          165 PQ  166 (295)
T ss_dssp             --
T ss_pred             cC
Confidence            54

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.94  E-value=9.8e-28  Score=273.76  Aligned_cols=224  Identities=16%  Similarity=0.139  Sum_probs=147.4

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhc--CCCCcceEE-------EEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQL--CHRNLVRLH-------DSYE  250 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L--~HPNIVkL~-------d~f~  250 (1310)
                      ..|.+.+.||+|+||.||+|.++.+|+.||||++.....   ...+.+.+|+.+++.|  +|||||+++       +++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            459999999999999999999999999999999986543   2345677886555554  699988765       5665


Q ss_pred             eCC-----------------eEEEEEecCCCCchHHHhhhcCC-CCHHHH------HHHHHHHHHHHHHhhhCCeeecCC
Q psy5279         251 TKD-----------------SFTIISELAGGGELLHSLTRQSY-YTEYDI------AHYIRQLLSGLDYMHRLSIAHLGL  306 (1310)
Q Consensus       251 ~~~-----------------~lyLVmEy~~GGeL~~~l~~~~~-lsE~~i------~~ii~QIl~GL~YLHs~gIVHRDL  306 (1310)
                      .++                 .+|||||||+ |+|.+.+...+. +.+...      ..++.||+.||+|||++||+||||
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDi  220 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHF  220 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcC
Confidence            443                 3899999999 899999876432 333333      355599999999999999999999


Q ss_pred             CCCCEEeecCCCCeEEEEeeccceeecCCCCCCCcccchHHHh---------------------------hhcCCCcccc
Q psy5279         307 TPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR---------------------------QALRHPWLNF  359 (1310)
Q Consensus       307 KPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~~~~~t~~yv~---------------------------~~~r~P~l~~  359 (1310)
                      ||+|||++.++  .+||+|||+|+.......  ...+|+.|++                           ..++.||-..
T Consensus       221 kp~NIll~~~~--~~kL~DFG~a~~~~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~  296 (371)
T 3q60_A          221 TPDNLFIMPDG--RLMLGDVSALWKVGTRGP--ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV  296 (371)
T ss_dssp             SGGGEEECTTS--CEEECCGGGEEETTCEEE--GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred             CHHHEEECCCC--CEEEEecceeeecCCCcc--CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence            99999998665  799999999987643210  1122222222                           2344555432


Q ss_pred             CCCCC-CCC--------CCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         360 ADRKP-TED--------TPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       360 ~~~~~-~~~--------~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ..... ...        ...........+...+.|.+...+..+...|+++.+++.|||..
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~  357 (371)
T 3q60_A          297 TPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFL  357 (371)
T ss_dssp             CTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHH
T ss_pred             CcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHH
Confidence            11100 000        00000011113334456666777777889999999999999963

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.94  E-value=1.7e-28  Score=288.41  Aligned_cols=159  Identities=18%  Similarity=0.246  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEee---cCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS---VRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAE 1023 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~---~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~ 1023 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.   .+...+||+|||+++.......  .......||+.|+|||++.+
T Consensus       121 ~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~  200 (432)
T 3p23_A          121 ITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSE  200 (432)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSC
T ss_pred             HHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhc
Confidence            345789999999999999999999999999953   2334689999999976543211  12233467899999999984


Q ss_pred             ---CCCCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHh
Q psy5279        1024 ---EPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLAN 1098 (1310)
Q Consensus      1024 ---~~ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e 1098 (1310)
                         ..++.++|||||||++|+|++ |..||...........+..............+..+++||.+|+. ++.+|+++.+
T Consensus       201 ~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e  280 (432)
T 3p23_A          201 DCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKH  280 (432)
T ss_dssp             C---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             ccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHH
Confidence               567789999999999999999 99999776555443333322222222234557778999999887 5678999999


Q ss_pred             hhCCCcccc
Q psy5279        1099 NIDHEFWHV 1107 (1310)
Q Consensus      1099 ~L~H~f~~~ 1107 (1310)
                      ++.|+||..
T Consensus       281 vl~hp~f~~  289 (432)
T 3p23_A          281 VLKHPFFWS  289 (432)
T ss_dssp             HHTSTTTCC
T ss_pred             HHhCccccC
Confidence            999999864

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.94  E-value=1.3e-27  Score=270.10  Aligned_cols=149  Identities=26%  Similarity=0.450  Sum_probs=130.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe---
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS---  254 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~---  254 (1310)
                      .+.++|.+.+.||+|+||.||+|.++.+|+.||||++.....  .....+.+|+.+|+.++||||+++++++...+.   
T Consensus        21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  100 (353)
T 3coi_A           21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN  100 (353)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred             ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccc
Confidence            356789999999999999999999999999999999975432  334568899999999999999999999988764   


Q ss_pred             ---EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         255 ---FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       255 ---lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                         +|+||||+. |+|.+.+..  .+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus       101 ~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~--~~kl~Dfg~~~~  175 (353)
T 3coi_A          101 FYDFYLVMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC--ELKILDFGLARH  175 (353)
T ss_dssp             CCCCEEEEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTC--CEEECSTTCTTC
T ss_pred             ceeEEEEecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCC--cEEEeecccccC
Confidence               499999998 588776643  499999999999999999999999999999999999998655  799999999987


Q ss_pred             ec
Q psy5279         332 IT  333 (1310)
Q Consensus       332 i~  333 (1310)
                      ..
T Consensus       176 ~~  177 (353)
T 3coi_A          176 AD  177 (353)
T ss_dssp             --
T ss_pred             CC
Confidence            54

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.94  E-value=4.2e-27  Score=262.28  Aligned_cols=199  Identities=21%  Similarity=0.271  Sum_probs=159.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ...++|++.+.||+|+||.||+|.+ .+|+.||||++........+.+.+|+.+|+.++|||||++++++...+.+|+||
T Consensus        36 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  114 (321)
T 2qkw_B           36 EATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIY  114 (321)
T ss_dssp             CCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEE
T ss_pred             HHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence            4668899999999999999999985 479999999987666566778899999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcC----CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         260 ELAGGGELLHSLTRQS----YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~----~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ||++||+|.+.+....    .+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.....
T Consensus       115 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~  192 (321)
T 2qkw_B          115 KYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENF--VPKITDFGISKKGTEL  192 (321)
T ss_dssp             ECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTC--CEEECCCTTCEECSSS
T ss_pred             EcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCC--CEEEeecccccccccc
Confidence            9999999999886543    489999999999999999999999999999999999998654  8999999999875432


Q ss_pred             CC---CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCC
Q psy5279         336 GK---LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNS  403 (1310)
Q Consensus       336 ~~---l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~  403 (1310)
                      ..   ....++|+.|     .+|++..+                 ..++...| | .|..+...++.+.|..+
T Consensus       193 ~~~~~~~~~~gt~~y-----~aPE~~~~-----------------~~~~~~~Di~slG~il~ell~g~~p~~~  243 (321)
T 2qkw_B          193 DQTHLSTVVKGTLGY-----IDPEYFIK-----------------GRLTEKSDVYSFGVVLFEVLCARSAIVQ  243 (321)
T ss_dssp             SCCCCBCCCEEETTT-----CCHHHHHH-----------------CBCCTHHHHHHHHHHHHHHHHCCTTCSC
T ss_pred             cccccccccCCCccc-----cCHHHhcC-----------------CCCCcccchHhHHHHHHHHHhCCCcccc
Confidence            21   1223344443     34443211                 12334456 4 66777777777766544

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.94  E-value=2.2e-28  Score=266.12  Aligned_cols=149  Identities=19%  Similarity=0.314  Sum_probs=118.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++...............+++.|+|||++.+..++.
T Consensus       112 ~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  189 (279)
T 1qpc_A          112 LDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI  189 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--TSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECH
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcC--CCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCc
Confidence            345779999999999999999999999999975  457999999999766443322223344567899999999888999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++|||||||++|+|++ |..||.+.+..+....+.... . ......++++..+++.+|+. ++.+|+++.+++.
T Consensus       190 ~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-R-MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC-C-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhccc-C-CCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            9999999999999999 999999988877766654331 1 11235678999999999887 5567888877653

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.94  E-value=4.8e-27  Score=262.10  Aligned_cols=228  Identities=18%  Similarity=0.235  Sum_probs=156.7

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHH-HHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELD-IMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~-IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ..++|++.+.||+|+||.||+|.++.+|+.||||++..... .....+.+|+. +++.++||||+++++++..++.+|+|
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv   99 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC   99 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence            34789999999999999999999999999999999976432 23344556666 77888999999999999999999999


Q ss_pred             EecCCCCchHHHhhh-----cCCCCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         259 SELAGGGELLHSLTR-----QSYYTEYDIAHYIRQLLSGLDYMHRL-SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~-----~~~lsE~~i~~ii~QIl~GL~YLHs~-gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      |||+.| +|.+.+..     ...+++..+..++.|++.||.|||++ ||+||||||+|||++.++  .+||+|||+|+.+
T Consensus       100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~--~~kl~Dfg~~~~~  176 (327)
T 3aln_A          100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSG--NIKLCDFGISGQL  176 (327)
T ss_dssp             ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTT--EEEECCCSSSCC-
T ss_pred             EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCC--CEEEccCCCceec
Confidence            999996 66555542     45699999999999999999999999 999999999999998655  8999999999876


Q ss_pred             cCCCCCCCcccchHHHhh-----------------------------hcCCCccccCCCCCC------CCCCCcchhhhh
Q psy5279         333 TSFGKLNPLEYDVRYVRQ-----------------------------ALRHPWLNFADRKPT------EDTPKLNTDALR  377 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv~~-----------------------------~~r~P~l~~~~~~~~------~~~p~~~~~~~~  377 (1310)
                      ..........+|+.|+++                             .+..||-........      ...+.+......
T Consensus       177 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (327)
T 3aln_A          177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEER  256 (327)
T ss_dssp             -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSC
T ss_pred             ccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccc
Confidence            543332233344444332                             233344322110000      000111111111


Q ss_pred             hhcccchhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         378 NYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       378 ~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      .+...+.+.+...+..+...|+++.+++.|||..
T Consensus       257 ~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~  290 (327)
T 3aln_A          257 EFSPSFINFVNLCLTKDESKRPKYKELLKHPFIL  290 (327)
T ss_dssp             CCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             cCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHH
Confidence            2233345666666667789999999999999974

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.94  E-value=6.7e-27  Score=259.96  Aligned_cols=167  Identities=22%  Similarity=0.373  Sum_probs=137.5

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEe------C
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYET------K  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~------~  252 (1310)
                      ...++|++.+.||+|+||.||+|.+..+|+.||||++.... .....+.+|+.+|+++ +||||+++++++..      .
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~   99 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   99 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCC
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcccc
Confidence            46789999999999999999999999999999999997543 3456788999999999 89999999999987      5


Q ss_pred             CeEEEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         253 DSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      +.+|+||||+.+|+|.+.+...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~--~~kl~Dfg~~~  177 (326)
T 2x7f_A          100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA--EVKLVDFGVSA  177 (326)
T ss_dssp             CEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTC--CEEECCCTTTC
T ss_pred             ceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCC--CEEEeeCcCce
Confidence            6899999999999999998754  4699999999999999999999999999999999999998655  79999999998


Q ss_pred             eecCCC-CCCCcccchHHHh
Q psy5279         331 RITSFG-KLNPLEYDVRYVR  349 (1310)
Q Consensus       331 ~i~~~~-~l~~~~~t~~yv~  349 (1310)
                      ...... .....++|+.|.+
T Consensus       178 ~~~~~~~~~~~~~~~~~y~a  197 (326)
T 2x7f_A          178 QLDRTVGRRNTFIGTPYWMA  197 (326)
T ss_dssp             -------------CCGGGCC
T ss_pred             ecCcCccccccccCCccccC
Confidence            764321 2223345554443

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.94  E-value=5e-27  Score=262.49  Aligned_cols=196  Identities=22%  Similarity=0.268  Sum_probs=147.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ..++|++.+.||+|+||.||+|.+  +|+.||||++.....  ...+.+.+|+.+|++++|||||++++++...+.+++|
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV  112 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred             ChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence            457899999999999999999976  688999999975532  3345688999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCC---CCHHHHHHHHHHHHHHHHHhhhCC--eeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         259 SELAGGGELLHSLTRQSY---YTEYDIAHYIRQLLSGLDYMHRLS--IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~---lsE~~i~~ii~QIl~GL~YLHs~g--IVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |||++||+|.+.+.....   +++..+..++.||+.||.|||++|  |+||||||+|||++.++  .+||+|||+|+...
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~--~~kL~Dfg~a~~~~  190 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKY--TVKVCDFGLSRLKA  190 (309)
T ss_dssp             EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTC--CEEECCCC------
T ss_pred             EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCC--cEEECCCCCCcccc
Confidence            999999999999976543   999999999999999999999999  99999999999998654  89999999998654


Q ss_pred             CCC-CCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCC
Q psy5279         334 SFG-KLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       334 ~~~-~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~  402 (1310)
                      ... .....++|+.     |.+|++..+..                 ++...| | +|..+...++.+.|+.
T Consensus       191 ~~~~~~~~~~gt~~-----y~aPE~~~~~~-----------------~~~~~DiwslG~il~elltg~~Pf~  240 (309)
T 3p86_A          191 STFLSSKSAAGTPE-----WMAPEVLRDEP-----------------SNEKSDVYSFGVILWELATLQQPWG  240 (309)
T ss_dssp             -----------CCT-----TSCHHHHTTCC-----------------CCTTHHHHHHHHHHHHHHHCCCTTT
T ss_pred             ccccccccCCCCcc-----ccChhhhcCCC-----------------CCchhhHHHHHHHHHHHHhCCCCCC
Confidence            332 1223344444     34555432211                 223356 4 5666777666666554

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.94  E-value=1.9e-28  Score=274.92  Aligned_cols=151  Identities=20%  Similarity=0.280  Sum_probs=121.0

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++....... .......+++.|+|||++.+..+
T Consensus       159 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  236 (334)
T 2pvf_A          159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY  236 (334)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcC--CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCc
Confidence            4567889999999999999999999999999975  45799999999976643322 12234456788999999998889


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|||||||++|+|++ |..||.+.+..+....+.....  ......++++..+++..|+. ++.+|+++.+++++
T Consensus       237 ~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR--MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCC--CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999 9999999887777665543321  12235678999999999887 55679998887754

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.94  E-value=1.5e-28  Score=269.00  Aligned_cols=154  Identities=13%  Similarity=0.136  Sum_probs=116.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC---CCcEEEEeeccceeeccCCcc------cccCCCCCCccccc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR---SVQVKLIDLGCTQRVTKLGTL------IHPINTPNPEFAAP 1018 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~---~~~VKL~DFGlAk~~~~~g~~------~~~~~tGtp~Y~AP 1018 (1310)
                      ...++.||+.||.|||++||+||||||+|||++..+   ...+||+|||+++........      ......||+.|+||
T Consensus       108 ~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  187 (298)
T 1csn_A          108 VAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI  187 (298)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCH
T ss_pred             HHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCc
Confidence            345678999999999999999999999999997532   234999999999866432211      12334578999999


Q ss_pred             ccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCCh---hHHHhhhccccc--cccccchhccHHHHHHHHHhcc-CCcc
Q psy5279        1019 EVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE---PETRQNVNFVRY--RFEYLFKELTQEATRFLMLIFK-HEVD 1092 (1310)
Q Consensus      1019 Evl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~---~e~~~~I~~~~~--~f~~~~~~lS~eakdLL~~il~-~~~~ 1092 (1310)
                      |++.+..++.++|||||||++|+|++|..||.+.+.   .+....+.....  ..+.....++++..+++.+|+. ++.+
T Consensus       188 E~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  267 (298)
T 1csn_A          188 NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDA  267 (298)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTC
T ss_pred             hhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCccc
Confidence            999999999999999999999999999999988543   233333322221  2223345788999999999886 6677


Q ss_pred             hhcHHhhhC
Q psy5279        1093 WITLANNID 1101 (1310)
Q Consensus      1093 rit~~e~L~ 1101 (1310)
                      |+++.++++
T Consensus       268 RP~~~~l~~  276 (298)
T 1csn_A          268 TPDYDYLQG  276 (298)
T ss_dssp             CCCHHHHHH
T ss_pred             CCCHHHHHH
Confidence            888877553

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.94  E-value=7.7e-27  Score=267.75  Aligned_cols=167  Identities=20%  Similarity=0.329  Sum_probs=139.5

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC-CCC-----cceEEEEEEeC
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRN-----LVRLHDSYETK  252 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~-HPN-----IVkL~d~f~~~  252 (1310)
                      ..+.++|++.+.||+|+||+||+|.++.+|+.||||++... ......+.+|+.+|+.+. |+|     |++++++|...
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  128 (382)
T 2vx3_A           50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR  128 (382)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred             CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence            35778999999999999999999999999999999999743 233456778999998885 553     99999999999


Q ss_pred             CeEEEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhh--hCCeeecCCCCCCEEeecCCCCeEEEEeecc
Q psy5279         253 DSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMH--RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL  328 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLH--s~gIVHRDLKPeNILL~~~~~~~VKLsDFGL  328 (1310)
                      +.+||||||+.| +|.+.+...  ..+++..++.++.||+.||.|||  ++||+||||||+|||++.++...+||+|||+
T Consensus       129 ~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~  207 (382)
T 2vx3_A          129 NHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGS  207 (382)
T ss_dssp             TEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred             CceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence            999999999975 898888765  35999999999999999999999  5799999999999999765556899999999


Q ss_pred             ceeecCCCCCCCcccchHHHh
Q psy5279         329 SRRITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       329 Ar~i~~~~~l~~~~~t~~yv~  349 (1310)
                      |+.....  ....++|+.|++
T Consensus       208 a~~~~~~--~~~~~~t~~y~a  226 (382)
T 2vx3_A          208 SCQLGQR--IYQYIQSRFYRS  226 (382)
T ss_dssp             CEETTCC--CCSSCSCGGGCC
T ss_pred             ceecccc--cccccCCccccC
Confidence            9877432  233455554443

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.94  E-value=5.4e-27  Score=262.66  Aligned_cols=199  Identities=17%  Similarity=0.175  Sum_probs=154.8

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC----eEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD----SFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~----~lyL  257 (1310)
                      .++|++.+.||+|+||.||+|.+.  ++.||||++.... .......+|+.+|++++|||||++++++....    .+|+
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l   99 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL   99 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence            367999999999999999999865  8999999996432 23344567999999999999999999998854    4799


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhC----------CeeecCCCCCCEEeecCCCCeEEEEeec
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL----------SIAHLGLTPGDLLVAHPGGRHLLLTDFG  327 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~----------gIVHRDLKPeNILL~~~~~~~VKLsDFG  327 (1310)
                      |||||++|+|.+.+.. ..+++..+..++.||+.||.|||++          ||+||||||+|||++.++  .+||+|||
T Consensus       100 v~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~--~~kL~DFg  176 (322)
T 3soc_A          100 ITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNL--TACIADFG  176 (322)
T ss_dssp             EEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTC--CEEECCCT
T ss_pred             EEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCC--eEEEccCC
Confidence            9999999999999865 4599999999999999999999999          999999999999998654  89999999


Q ss_pred             cceeecCCCC---CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCC
Q psy5279         328 LSRRITSFGK---LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       328 LAr~i~~~~~---l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~  402 (1310)
                      +|+.+.....   ....++|+.|     .+|++..+....            ...++...| | +|+.+...++.+.|..
T Consensus       177 ~a~~~~~~~~~~~~~~~~gt~~y-----~aPE~~~~~~~~------------~~~~~~~~DiwslG~il~el~tg~~pf~  239 (322)
T 3soc_A          177 LALKFEAGKSAGDTHGQVGTRRY-----MAPEVLEGAINF------------QRDAFLRIDMYAMGLVLWELASRCTAAD  239 (322)
T ss_dssp             TCEEECTTSCCCCCTTCCCCGGG-----CCHHHHTTCCCC------------CHHHHHHHHHHHHHHHHHHHHTTBTTSS
T ss_pred             cccccccccCccccccCccCccc-----cCHhhccccccc------------CcCCCccchhHHHHHHHHHHHhCCCCCC
Confidence            9998765332   2234555555     455554221110            011333456 4 6777777777777654


Q ss_pred             C
Q psy5279         403 S  403 (1310)
Q Consensus       403 ~  403 (1310)
                      .
T Consensus       240 ~  240 (322)
T 3soc_A          240 G  240 (322)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.94  E-value=5e-27  Score=268.85  Aligned_cols=154  Identities=27%  Similarity=0.351  Sum_probs=133.5

Q ss_pred             cCCCeeeeceecccCceEEEEEE-----EcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAV-----ERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~-----~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~  254 (1310)
                      ..++|++.+.||+|+||+||+|.     +..+++.||||++.... ......+.+|+.+|++++|||||++++++...+.
T Consensus        69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~  148 (367)
T 3l9p_A           69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  148 (367)
T ss_dssp             CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence            45789999999999999999999     55678899999996542 3344568899999999999999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhc-------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEee
Q psy5279         255 FTIISELAGGGELLHSLTRQ-------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDF  326 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~-------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDF  326 (1310)
                      .|+|||||+||+|.+.+...       ..+++.++..++.||+.||.|||++||+||||||+|||++.++ +..+||+||
T Consensus       149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DF  228 (367)
T 3l9p_A          149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF  228 (367)
T ss_dssp             CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred             CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCC
Confidence            99999999999999998654       3489999999999999999999999999999999999998544 346999999


Q ss_pred             ccceeecC
Q psy5279         327 GLSRRITS  334 (1310)
Q Consensus       327 GLAr~i~~  334 (1310)
                      |+|+.+..
T Consensus       229 G~a~~~~~  236 (367)
T 3l9p_A          229 GMARDIYR  236 (367)
T ss_dssp             HHHHHHHH
T ss_pred             cccccccc
Confidence            99986643

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.94  E-value=2.3e-26  Score=251.54  Aligned_cols=153  Identities=16%  Similarity=0.272  Sum_probs=136.3

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||||++....  ....+.+|+.+++.+ +||||+++++++......++|
T Consensus         7 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   84 (298)
T 1csn_A            7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV   84 (298)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred             ccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence            46688999999999999999999999999999999986543  233477899999999 899999999999999999999


Q ss_pred             EecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC---CCeEEEEeeccceeecC
Q psy5279         259 SELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG---GRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~---~~~VKLsDFGLAr~i~~  334 (1310)
                      |||+ ||+|.+.+...+ .+++.++..++.||+.||.|||++||+||||||+|||++.++   ...+||+|||+|+....
T Consensus        85 ~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~  163 (298)
T 1csn_A           85 IDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  163 (298)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             EEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence            9999 999999997654 499999999999999999999999999999999999997644   23499999999998765


Q ss_pred             C
Q psy5279         335 F  335 (1310)
Q Consensus       335 ~  335 (1310)
                      .
T Consensus       164 ~  164 (298)
T 1csn_A          164 P  164 (298)
T ss_dssp             T
T ss_pred             c
Confidence            4

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.94  E-value=1.3e-28  Score=271.59  Aligned_cols=151  Identities=23%  Similarity=0.298  Sum_probs=116.0

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++....... .......+++.|+|||++.+..+
T Consensus       150 ~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  227 (316)
T 2xir_A          150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY  227 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG--GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHhCCcccccCccceEEECC--CCCEEECCCccccccccCccceeccCCCcceeecCchhhccccc
Confidence            4567889999999999999999999999999975  45699999999876533222 11222345688999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHH-HhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPET-RQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~-~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|||||||++|+|++ |..||.+....+. ...+.... . ......++++..+++..|+. ++.+|+++.++++|
T Consensus       228 ~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-R-MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTC-C-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCc-c-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999998 9999988764433 22222211 1 12234578999999999887 56679999887765

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.94  E-value=1.1e-26  Score=259.27  Aligned_cols=166  Identities=19%  Similarity=0.360  Sum_probs=137.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCC-cEEEEEEEecCCcchHHHHHHHHHHHHhcCCCC------cceEEEEEEeC
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSG-RNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN------LVRLHDSYETK  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg-~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPN------IVkL~d~f~~~  252 (1310)
                      .+.++|++.+.||+|+||+||+|.+..++ +.||+|++... ....+.+.+|+.+|+.+.|++      ++.+++++...
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~   94 (355)
T 2eu9_A           16 WLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH   94 (355)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred             eecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence            46789999999999999999999998887 68999999643 344567889999999998776      99999999999


Q ss_pred             CeEEEEEecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC--------------
Q psy5279         253 DSFTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP--------------  316 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~--------------  316 (1310)
                      +.++|||||+ +|+|.+.+....  .+++.++..++.||+.||.|||++||+||||||+|||++..              
T Consensus        95 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~  173 (355)
T 2eu9_A           95 GHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEE  173 (355)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred             CeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccc
Confidence            9999999999 566777765543  59999999999999999999999999999999999999432              


Q ss_pred             ---CCCeEEEEeeccceeecCCCCCCCcccchHHHh
Q psy5279         317 ---GGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       317 ---~~~~VKLsDFGLAr~i~~~~~l~~~~~t~~yv~  349 (1310)
                         ....+||+|||+|+.....  ....++|+.|.+
T Consensus       174 ~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~a  207 (355)
T 2eu9_A          174 KSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRP  207 (355)
T ss_dssp             EEESCCCEEECCCTTCEETTSC--CCSSCSCGGGCC
T ss_pred             cccCCCcEEEeecCcccccccc--ccCCcCCCcccC
Confidence               2347999999999875432  233455655544

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.94  E-value=2.6e-28  Score=287.38  Aligned_cols=147  Identities=20%  Similarity=0.338  Sum_probs=116.9

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCc
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQ 1029 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~k 1029 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++..............+++.|+|||++....++.+
T Consensus       288 ~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~--~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  365 (454)
T 1qcf_A          288 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSA--SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK  365 (454)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSSCSGGGEEECT--TCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHHHHHHhCCccCCCCCHHHEEECC--CCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcH
Confidence            45679999999999999999999999999985  4679999999997653221111222334678999999998899999


Q ss_pred             cchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1030 TDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1030 sDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +|||||||++|+|++ |..||.+.+..+....+... ++.+ ....+++++.+++.+|+. ++.+|+++.+++
T Consensus       366 ~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-~~~~-~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~  436 (454)
T 1qcf_A          366 SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMP-RPENCPEELYNIMMRCWKNRPEERPTFEYIQ  436 (454)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHT-CCCC-CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCC-CCCCCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence            999999999999999 99999998888777665432 2222 235678999999999887 556788887765

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.94  E-value=5e-27  Score=260.51  Aligned_cols=164  Identities=27%  Similarity=0.395  Sum_probs=134.2

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEc-CCCcEEEEEEEecCC--cchHHHHHHHHHHHHhc---CCCCcceEEEEEE---
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVER-SSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQL---CHRNLVRLHDSYE---  250 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k-~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L---~HPNIVkL~d~f~---  250 (1310)
                      ...++|++.+.||+|+||.||+|.+. .+|+.||+|++....  ......+.+|+.+++.+   .||||+++++++.   
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            35578999999999999999999996 778999999986432  12233466788888776   8999999999997   


Q ss_pred             --eCCeEEEEEecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEee
Q psy5279         251 --TKDSFTIISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF  326 (1310)
Q Consensus       251 --~~~~lyLVmEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDF  326 (1310)
                        ....+++||||+. |+|.+.+....  .+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+||
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~--~~kl~Df  164 (326)
T 1blx_A           88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADF  164 (326)
T ss_dssp             CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC--CEEECSC
T ss_pred             cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCC--CEEEecC
Confidence              5678999999998 58988886543  499999999999999999999999999999999999998655  7999999


Q ss_pred             ccceeecCCCCCCCcccchH
Q psy5279         327 GLSRRITSFGKLNPLEYDVR  346 (1310)
Q Consensus       327 GLAr~i~~~~~l~~~~~t~~  346 (1310)
                      |+++...........++|+.
T Consensus       165 g~~~~~~~~~~~~~~~~~~~  184 (326)
T 1blx_A          165 GLARIYSFQMALTSVVVTLW  184 (326)
T ss_dssp             CSCCCCCGGGGGCCCCCCCT
T ss_pred             cccccccCCCCccccccccc
Confidence            99987654333333334433

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.94  E-value=3e-27  Score=264.45  Aligned_cols=226  Identities=19%  Similarity=0.250  Sum_probs=170.2

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc------hHHHHHHHHHHHHhcC--CCCcceEEEEEE
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ------YKSLFKNELDIMNQLC--HRNLVRLHDSYE  250 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~------~~~~~~rEI~IL~~L~--HPNIVkL~d~f~  250 (1310)
                      ..+.++|++.+.||+|+||.||+|.++.+|+.||||++......      ....+.+|+.+|+++.  ||||+++++++.
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            36788999999999999999999999999999999999754211      2234668999999996  599999999999


Q ss_pred             eCCeEEEEEecCCC-CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         251 TKDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       251 ~~~~lyLVmEy~~G-GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                      .++.+++|||++.+ ++|.+.+...+.+++..+..++.||+.||+|||++||+||||||+|||++.+ ...+||+|||+|
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~-~~~~kL~Dfg~~  197 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN-RGELKLIDFGSG  197 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT-TTEEEECCCTTC
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCC-CCCEEEeeCccc
Confidence            99999999999987 8999999887889999999999999999999999999999999999999833 238999999999


Q ss_pred             eeecCCCCCCCcccchHHHhhhcC--CCccc---------------cCCCCCCCCCCCcchhh-h-------hhhcccch
Q psy5279         330 RRITSFGKLNPLEYDVRYVRQALR--HPWLN---------------FADRKPTEDTPKLNTDA-L-------RNYYNLYK  384 (1310)
Q Consensus       330 r~i~~~~~l~~~~~t~~yv~~~~r--~P~l~---------------~~~~~~~~~~p~~~~~~-~-------~~~~~~~~  384 (1310)
                      +..... .....++|+.|.++...  .+...               +....     |....+. .       ..+...+.
T Consensus       198 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~-----pf~~~~~~~~~~~~~~~~~~~~~~  271 (320)
T 3a99_A          198 ALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI-----PFEHDEEIIRGQVFFRQRVSSECQ  271 (320)
T ss_dssp             EECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSC-----SCCSHHHHHHCCCCCSSCCCHHHH
T ss_pred             cccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCC-----CCCChhhhhcccccccccCCHHHH
Confidence            987543 23344556555443210  00000               00000     0000000 0       01122335


Q ss_pred             hhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         385 DWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       385 D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +.+...+..+...|+++.+++.|||..
T Consensus       272 ~li~~~l~~dp~~Rps~~~ll~hp~~~  298 (320)
T 3a99_A          272 HLIRWCLALRPSDRPTFEEIQNHPWMQ  298 (320)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             HHHHHHccCChhhCcCHHHHhcCHhhc
Confidence            556666667789999999999999974

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.94  E-value=5.7e-28  Score=263.85  Aligned_cols=148  Identities=17%  Similarity=0.260  Sum_probs=111.8

Q ss_pred             HHHHHHHHHHHHHHHHCC--ceecccCCCcEEEeecC---CCcEEEEeeccceeeccCCcccccCCCCCCccccccccc-
Q psy5279         949 AYCVTSVLDGLQYLHWRG--LCHLNIEPDNVVMASVR---SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA- 1022 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~g--IVHRDLKPeNILl~~~~---~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~- 1022 (1310)
                      ..++.||+.||.|||++|  |+||||||+|||++..+   ...+||+|||+++.....    .....|++.|+|||++. 
T Consensus       125 ~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~  200 (287)
T 4f0f_A          125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS----VSGLLGNFQWMAPETIGA  200 (287)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC----EECCCCCCTTSCGGGSSC
T ss_pred             HHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc----ccccCCCccccCchhhcc
Confidence            345779999999999999  99999999999997532   224999999998754321    22345789999999994 


Q ss_pred             -CCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHH--HhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHh
Q psy5279        1023 -EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET--RQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLAN 1098 (1310)
Q Consensus      1023 -~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~--~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e 1098 (1310)
                       ...++.++|||||||++|+|++|..||.+.+....  ...+..... .+.....++++..+++.+|+. ++.+|+++.+
T Consensus       201 ~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  279 (287)
T 4f0f_A          201 EEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL-RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSY  279 (287)
T ss_dssp             SSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC-CCCCCcccCHHHHHHHHHHhcCChhhCcCHHH
Confidence             44578899999999999999999999987665443  222222111 122345788999999999887 5667988887


Q ss_pred             hhC
Q psy5279        1099 NID 1101 (1310)
Q Consensus      1099 ~L~ 1101 (1310)
                      +++
T Consensus       280 ll~  282 (287)
T 4f0f_A          280 IVK  282 (287)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            653

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.94  E-value=2.8e-28  Score=284.00  Aligned_cols=98  Identities=21%  Similarity=0.239  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccc------
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVL------ 1021 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl------ 1021 (1310)
                      ...++.||+.||+|||++|||||||||+|||++.  ++.+||+|||+++.....    .....| +.|+|||++      
T Consensus       213 ~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~--~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~  285 (413)
T 3dzo_A          213 RLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQ--RGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLP  285 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT--TCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTST
T ss_pred             HHHHHHHHHHHHHHHHhCCcccCCcccceEEEec--CCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccc
Confidence            3456789999999999999999999999999986  455999999998764322    223356 899999999      


Q ss_pred             ----cCCCCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1022 ----AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1022 ----~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                          .+..|+.++|||||||++|+|++|..||.+.
T Consensus       286 ~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~  320 (413)
T 3dzo_A          286 FGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDD  320 (413)
T ss_dssp             TGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTT
T ss_pred             cccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence                5556888999999999999999999999653

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.94  E-value=1.8e-26  Score=256.55  Aligned_cols=199  Identities=22%  Similarity=0.238  Sum_probs=152.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ...++|++.+.||+|+||.||+|.+..+++.||+|++.....   ...+.+.+|+.+|+.++||||+++++++..++.+|
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  110 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY  110 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence            345789999999999999999999999999999999975422   23467889999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      +||||++|++|.+.+...+.+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++......
T Consensus       111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~--~~kl~Dfg~~~~~~~~~  188 (309)
T 2h34_A          111 VDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADD--FAYLVDFGIASATTDEK  188 (309)
T ss_dssp             EEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--CEEECSCCC--------
T ss_pred             EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCC--CEEEecCccCccccccc
Confidence            9999999999999998877899999999999999999999999999999999999998655  79999999998765432


Q ss_pred             --CCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCC
Q psy5279         337 --KLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       337 --~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~  402 (1310)
                        ......+|+.     |.+|++..+.                 .++...| | +|..+...++.+.|..
T Consensus       189 ~~~~~~~~~~~~-----y~aPE~~~~~-----------------~~~~~~Di~slG~il~~l~~g~~pf~  236 (309)
T 2h34_A          189 LTQLGNTVGTLY-----YMAPERFSES-----------------HATYRADIYALTCVLYECLTGSPPYQ  236 (309)
T ss_dssp             --------CCGG-----GCCGGGTCC---------------------CCCHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccccccCCCcC-----ccCHHHHcCC-----------------CCCchHhHHHHHHHHHHHHHCCCCCC
Confidence              1222334433     4556654221                 1223355 3 5666667677666554

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.94  E-value=8.1e-27  Score=265.54  Aligned_cols=200  Identities=17%  Similarity=0.167  Sum_probs=151.6

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCC-----CcEEEEEEEecCCcch-----------HHHHHHHHHHHHhcCCCCcce
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSS-----GRNYAAKVMTGKGNQY-----------KSLFKNELDIMNQLCHRNLVR  244 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~T-----g~~vAIKiI~~~~~~~-----------~~~~~rEI~IL~~L~HPNIVk  244 (1310)
                      ..+.|++.+.||+|+||.||+|.++.+     ++.||||++.......           ...+.+|+..++.++|||||+
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            456899999999999999999998775     5889999987654211           112345667778889999999


Q ss_pred             EEEEEEeC----CeEEEEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCC
Q psy5279         245 LHDSYETK----DSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR  319 (1310)
Q Consensus       245 L~d~f~~~----~~lyLVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~  319 (1310)
                      +++++...    ..+||||||| ||+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++.+.+.
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~  191 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPD  191 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTT
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCC
Confidence            99999875    4589999999 99999998765 569999999999999999999999999999999999999844445


Q ss_pred             eEEEEeeccceeecCCCCC--------CCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chh
Q psy5279         320 HLLLTDFGLSRRITSFGKL--------NPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGN  389 (1310)
Q Consensus       320 ~VKLsDFGLAr~i~~~~~l--------~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~  389 (1310)
                      .+||+|||+|+.+...+..        ...+||+.|+     +|+...+                 ..++...| | +|.
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~-----aPE~~~~-----------------~~~~~~~Di~slG~  249 (364)
T 3op5_A          192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFT-----SIDAHNG-----------------VAPSRRGDLEILGY  249 (364)
T ss_dssp             CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTC-----CHHHHTT-----------------CCCCHHHHHHHHHH
T ss_pred             eEEEEECCcceecccCCcccccccCcccccCCCCCcc-----CHHHhCC-----------------CCCCchhhHHHHHH
Confidence            8999999999987543221        2234555544     3443211                 11334456 4 677


Q ss_pred             hhhhhcccCCCCCC
Q psy5279         390 AAVRRYYRRRPLNS  403 (1310)
Q Consensus       390 ~~l~~~~~r~~~~~  403 (1310)
                      .+...++.+.|+..
T Consensus       250 ~l~el~~g~~Pf~~  263 (364)
T 3op5_A          250 CMIQWLTGHLPWED  263 (364)
T ss_dssp             HHHHHHHSCCTTGG
T ss_pred             HHHHHHhCCCCccc
Confidence            77777777766553

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=1.8e-26  Score=258.85  Aligned_cols=153  Identities=28%  Similarity=0.411  Sum_probs=133.2

Q ss_pred             cCCCeeeeceecccCceEEEEEEEc-----CCCcEEEEEEEecCC-cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCC
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVER-----SSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKD  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k-----~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~  253 (1310)
                      ..+.|++.+.||+|+||.||+|.+.     .+++.||+|++.... ....+.+.+|+.+|++| +||||+++++++...+
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            3478999999999999999999973     467789999997542 23456788999999999 9999999999999999


Q ss_pred             eEEEEEecCCCCchHHHhhhcC-----------------------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCC
Q psy5279         254 SFTIISELAGGGELLHSLTRQS-----------------------YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGD  310 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~-----------------------~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeN  310 (1310)
                      .+|+||||++||+|.+.+....                       .+++.++..++.||+.||.|||++||+||||||+|
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N  202 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN  202 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhh
Confidence            9999999999999999987543                       27899999999999999999999999999999999


Q ss_pred             EEeecCCCCeEEEEeeccceeecCC
Q psy5279         311 LLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       311 ILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ||++.++  .+||+|||+|+.+...
T Consensus       203 Ill~~~~--~~kL~Dfg~~~~~~~~  225 (344)
T 1rjb_A          203 VLVTHGK--VVKICDFGLARDIMSD  225 (344)
T ss_dssp             EEEETTT--EEEECCCGGGSCGGGC
T ss_pred             EEEcCCC--cEEeCCCccCcccccC
Confidence            9998655  8999999999877543

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.94  E-value=6.2e-27  Score=260.30  Aligned_cols=154  Identities=20%  Similarity=0.296  Sum_probs=120.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCc---EEEEEEEecC--CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGR---NYAAKVMTGK--GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~---~vAIKiI~~~--~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~  254 (1310)
                      ...++|++.+.||+|+||.||+|.++.++.   .||||++...  .....+.+.+|+.+|++++||||+++++++...+.
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   99 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA   99 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence            345789999999999999999999888775   8999998754  23445678899999999999999999999988776


Q ss_pred             E------EEEEecCCCCchHHHhhhcC------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEE
Q psy5279         255 F------TIISELAGGGELLHSLTRQS------YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL  322 (1310)
Q Consensus       255 l------yLVmEy~~GGeL~~~l~~~~------~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VK  322 (1310)
                      .      ++||||+.||+|.+.+....      .+++..+..++.||+.||.|||++||+||||||+|||++.++  .+|
T Consensus       100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~--~~k  177 (323)
T 3qup_A          100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM--TVC  177 (323)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS--CEE
T ss_pred             ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCC--CEE
Confidence            5      99999999999998885432      589999999999999999999999999999999999998654  899


Q ss_pred             EEeeccceeecCC
Q psy5279         323 LTDFGLSRRITSF  335 (1310)
Q Consensus       323 LsDFGLAr~i~~~  335 (1310)
                      |+|||+|+.....
T Consensus       178 l~Dfg~a~~~~~~  190 (323)
T 3qup_A          178 VADFGLSRKIYSG  190 (323)
T ss_dssp             ECCCCC-------
T ss_pred             Eeecccccccccc
Confidence            9999999877543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.94  E-value=3e-28  Score=263.40  Aligned_cols=150  Identities=20%  Similarity=0.351  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHHHHHHCC---ceecccCCCcEEEeec------CCCcEEEEeeccceeeccCCcccccCCCCCCcccccc
Q psy5279         949 AYCVTSVLDGLQYLHWRG---LCHLNIEPDNVVMASV------RSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPE 1019 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~g---IVHRDLKPeNILl~~~------~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APE 1019 (1310)
                      ..++.||+.||.|||++|   |+||||||+|||++..      ....+||+|||++........   ....|++.|+|||
T Consensus       108 ~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~y~aPE  184 (271)
T 3dtc_A          108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK---MSAAGAYAWMAPE  184 (271)
T ss_dssp             HHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----------------CCGGGSCHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccccc---cCCCCccceeCHH
Confidence            345679999999999999   9999999999999752      145699999999876543221   1235779999999


Q ss_pred             cccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHh
Q psy5279        1020 VLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLAN 1098 (1310)
Q Consensus      1020 vl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e 1098 (1310)
                      ++.+..++.++|||||||++|+|++|..||.+.+.......+.......+ ....++++..+++.+|+. ++.+|+++.+
T Consensus       185 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~e  263 (271)
T 3dtc_A          185 VIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP-IPSTCPEPFAKLMEDCWNPDPHSRPSFTN  263 (271)
T ss_dssp             HHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCC-CCcccCHHHHHHHHHHhcCCcccCcCHHH
Confidence            99999999999999999999999999999999887766655544433322 235678999999999887 5667999888


Q ss_pred             hhCC
Q psy5279        1099 NIDH 1102 (1310)
Q Consensus      1099 ~L~H 1102 (1310)
                      ++++
T Consensus       264 ~l~~  267 (271)
T 3dtc_A          264 ILDQ  267 (271)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7653

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.94  E-value=3.9e-28  Score=264.77  Aligned_cols=150  Identities=16%  Similarity=0.163  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++...............+++.|+|||++.+..++.
T Consensus       116 ~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  193 (281)
T 3cc6_A          116 VLYSLQICKAMAYLESINCVHRDIAVRNILVAS--PECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTT  193 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEE--TTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCccceEEECC--CCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCc
Confidence            345679999999999999999999999999986  457999999998765433222223345678899999999889999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++|||||||++|+|++ |..||......+....+.....  ......++++..+++.+|+. ++.+|+++.+++.+
T Consensus       194 ~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          194 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR--LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            9999999999999998 9999988777666555443221  11234678999999999886 56678888887654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.94  E-value=2.2e-28  Score=280.70  Aligned_cols=148  Identities=20%  Similarity=0.276  Sum_probs=114.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccc-cCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIH-PINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~-~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||+++.......... ....+++.|+|||++.+..++
T Consensus       216 ~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~--~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  293 (377)
T 3cbl_A          216 LQMVGDAAAGMEYLESKCCIHRDLAARNCLVTE--KNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYS  293 (377)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--TCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEE
T ss_pred             HHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcC--CCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCC
Confidence            345679999999999999999999999999975  45799999999876432111110 111234679999999988899


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      .++|||||||++|+|++ |..||.+.+..+....+.... +.+ ....++++..+++.+|+. +|.+|+++.+++
T Consensus       294 ~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~  366 (377)
T 3cbl_A          294 SESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG-RLP-CPELCPDAVFRLMEQCWAYEPGQRPSFSTIY  366 (377)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTC-CCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCC-CCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            99999999999999998 999999988777666554322 121 234578899999999887 556788887765

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.94  E-value=1.3e-26  Score=251.47  Aligned_cols=163  Identities=20%  Similarity=0.357  Sum_probs=141.3

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEe--------
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYET--------  251 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~--------  251 (1310)
                      .+..+|++.+.||+|+||.||+|.+..+|+.||+|++....    ..+.+|+.+|+.++||||+++++++..        
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   83 (284)
T 2a19_B            8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS   83 (284)
T ss_dssp             HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred             hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence            45678999999999999999999999999999999997543    346689999999999999999999865        


Q ss_pred             --------CCeEEEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeE
Q psy5279         252 --------KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL  321 (1310)
Q Consensus       252 --------~~~lyLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~V  321 (1310)
                              ...+|+||||+++|+|.+.+...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+
T Consensus        84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~  161 (284)
T 2a19_B           84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK--QV  161 (284)
T ss_dssp             -----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT--EE
T ss_pred             cccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCC--CE
Confidence                    45689999999999999998643  5699999999999999999999999999999999999998765  89


Q ss_pred             EEEeeccceeecCCCCCCCcccchHHH
Q psy5279         322 LLTDFGLSRRITSFGKLNPLEYDVRYV  348 (1310)
Q Consensus       322 KLsDFGLAr~i~~~~~l~~~~~t~~yv  348 (1310)
                      ||+|||+++............+|+.|.
T Consensus       162 kl~Dfg~~~~~~~~~~~~~~~~~~~y~  188 (284)
T 2a19_B          162 KIGDFGLVTSLKNDGKRTRSKGTLRYM  188 (284)
T ss_dssp             EECCCTTCEESSCCSCCCCCCSCCTTS
T ss_pred             EECcchhheeccccccccccCCccccc
Confidence            999999999886655444455555444

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.94  E-value=3e-28  Score=265.62  Aligned_cols=150  Identities=18%  Similarity=0.300  Sum_probs=118.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++.........  ......+++.|+|||++.+..+
T Consensus       124 ~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  201 (291)
T 1u46_A          124 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT--RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF  201 (291)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE--TTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCchheEEEcC--CCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCC
Confidence            345679999999999999999999999999986  457999999998766433221  1223345678999999998889


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|||||||++|+|++ |..||.+.+..+....+......++ ....+++++++++.+|+. ++.+|+++.++++
T Consensus       202 ~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          202 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP-RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             EHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCC-CCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            999999999999999999 9999999988877776655443333 235688999999999886 5667989888764

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.94  E-value=1.1e-27  Score=264.97  Aligned_cols=226  Identities=16%  Similarity=0.186  Sum_probs=159.7

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc------hHHHHHHHHHHHHhc----CCCCcceEEEE
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ------YKSLFKNELDIMNQL----CHRNLVRLHDS  248 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~------~~~~~~rEI~IL~~L----~HPNIVkL~d~  248 (1310)
                      ..+.++|++.+.||+|+||.||+|.++.+|+.||||++......      ....+.+|+.+|+++    +||||++++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~  106 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW  106 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence            35778999999999999999999999999999999999654321      122356799999999    89999999999


Q ss_pred             EEeCCeEEEEEec-CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeec
Q psy5279         249 YETKDSFTIISEL-AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG  327 (1310)
Q Consensus       249 f~~~~~lyLVmEy-~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFG  327 (1310)
                      +...+..++|||+ +.+++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++.+ +..+||+|||
T Consensus       107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~-~~~~kl~dfg  185 (312)
T 2iwi_A          107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLR-RGCAKLIDFG  185 (312)
T ss_dssp             C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETT-TTEEEECCCS
T ss_pred             EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCC-CCeEEEEEcc
Confidence            9999999999999 7899999999887789999999999999999999999999999999999999832 2389999999


Q ss_pred             cceeecCCCCCCCcccchHHHhh--------------------------hcCCCccccCCCCCCCCCCCcchhhhhhhcc
Q psy5279         328 LSRRITSFGKLNPLEYDVRYVRQ--------------------------ALRHPWLNFADRKPTEDTPKLNTDALRNYYN  381 (1310)
Q Consensus       328 LAr~i~~~~~l~~~~~t~~yv~~--------------------------~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~  381 (1310)
                      +++...... .....+|+.|.++                          .++.||-......  .....+    -..+..
T Consensus       186 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~----~~~~~~  258 (312)
T 2iwi_A          186 SGALLHDEP-YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEIL--EAELHF----PAHVSP  258 (312)
T ss_dssp             SCEECCSSC-BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH--HTCCCC----CTTSCH
T ss_pred             hhhhcccCc-ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHh--hhccCC----cccCCH
Confidence            999875432 2333444443322                          1222221100000  000000    001122


Q ss_pred             cchhhchhhhhhhcccCCCCCCccCCCccee
Q psy5279         382 LYKDWYGNAAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       382 ~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      .+.+.+...+..+...|+++.+++.|||...
T Consensus       259 ~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~  289 (312)
T 2iwi_A          259 DCCALIRRCLAPKPSSRPSLEEILLDPWMQT  289 (312)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcChhhcC
Confidence            3345555566667889999999999999743

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.94  E-value=8.2e-27  Score=258.26  Aligned_cols=150  Identities=24%  Similarity=0.325  Sum_probs=133.5

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEE----eCCeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE----TKDSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~----~~~~lyL  257 (1310)
                      .++|++.+.||+|+||.||+|.++.+|+.||||++........+.+.+|+.+|+.++||||+++++++.    ....+|+
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            467999999999999999999999999999999997665566677899999999999999999999987    3457899


Q ss_pred             EEecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         258 ISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ||||+.+|+|.+.+..    ...+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~--~~kl~dfg~~~~~~  185 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG--QPVLMDLGSMNQAC  185 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS--CEEECCCSSCEESC
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC--CEEEEecCcchhcc
Confidence            9999999999988865    35699999999999999999999999999999999999997655  79999999998753

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.94  E-value=2e-26  Score=253.89  Aligned_cols=153  Identities=23%  Similarity=0.347  Sum_probs=135.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEc-----CCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVER-----SSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k-----~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~  254 (1310)
                      ..++|.+.+.||+|+||.||+|.+.     .+++.||+|++.... ....+.+.+|+.+|+.|+|||||++++++...+.
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  100 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP  100 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence            3578999999999999999999983     556899999997543 2345668899999999999999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhcCC------------------------CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCC
Q psy5279         255 FTIISELAGGGELLHSLTRQSY------------------------YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGD  310 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~~------------------------lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeN  310 (1310)
                      +|+||||++||+|.+.+.....                        +++.++..++.||+.||.|||++||+||||||+|
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~N  180 (314)
T 2ivs_A          101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARN  180 (314)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchhe
Confidence            9999999999999999876432                        8899999999999999999999999999999999


Q ss_pred             EEeecCCCCeEEEEeeccceeecCC
Q psy5279         311 LLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       311 ILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ||++.++  .+||+|||+|+.....
T Consensus       181 Ili~~~~--~~kl~Dfg~~~~~~~~  203 (314)
T 2ivs_A          181 ILVAEGR--KMKISDFGLSRDVYEE  203 (314)
T ss_dssp             EEEETTT--EEEECCCTTCEECTTT
T ss_pred             EEEcCCC--CEEEcccccccccccc
Confidence            9998655  8999999999977543

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.94  E-value=2.3e-26  Score=251.10  Aligned_cols=200  Identities=19%  Similarity=0.247  Sum_probs=155.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcch-------HHHHHHHHHHHHhcCCCCcceEEEEEEeC
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQY-------KSLFKNELDIMNQLCHRNLVRLHDSYETK  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~-------~~~~~rEI~IL~~L~HPNIVkL~d~f~~~  252 (1310)
                      ...++|++.+.||+|+||.||+|.+..+++.||+|++.......       .+.+.+|+.+|++++||||+++++++.+.
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   95 (287)
T 4f0f_A           16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP   95 (287)
T ss_dssp             CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred             hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence            34578999999999999999999999999999999986543211       15688999999999999999999999776


Q ss_pred             CeEEEEEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCC--eeecCCCCCCEEeecCCC---CeEEEEee
Q psy5279         253 DSFTIISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLS--IAHLGLTPGDLLVAHPGG---RHLLLTDF  326 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~g--IVHRDLKPeNILL~~~~~---~~VKLsDF  326 (1310)
                      .  ++||||++||+|.+.+.... .+++..+..++.|++.||.|||++|  |+||||||+|||++.++.   ..+||+||
T Consensus        96 ~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df  173 (287)
T 4f0f_A           96 P--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF  173 (287)
T ss_dssp             T--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred             C--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence            6  79999999999998886543 5999999999999999999999999  999999999999976441   24999999


Q ss_pred             ccceeecCCCCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCC
Q psy5279         327 GLSRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNS  403 (1310)
Q Consensus       327 GLAr~i~~~~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~  403 (1310)
                      |+|+....  ......+|+.     |.+|+...+..               ..++...| | .|..+...++.+.|...
T Consensus       174 g~~~~~~~--~~~~~~g~~~-----y~aPE~~~~~~---------------~~~~~~~Di~slG~~l~~l~~g~~pf~~  230 (287)
T 4f0f_A          174 GLSQQSVH--SVSGLLGNFQ-----WMAPETIGAEE---------------ESYTEKADTYSFAMILYTILTGEGPFDE  230 (287)
T ss_dssp             TTCBCCSS--CEECCCCCCT-----TSCGGGSSCSS---------------CEECHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             Cccccccc--cccccCCCcc-----ccCchhhccCC---------------CCcCchhhHHHHHHHHHHHHcCCCCCcc
Confidence            99986533  2223444544     44566431110               11334456 4 66777777777766543

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.94  E-value=1.5e-26  Score=256.37  Aligned_cols=151  Identities=25%  Similarity=0.395  Sum_probs=132.9

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC-CCCcceEEEEEE--------eC
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLVRLHDSYE--------TK  252 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~--------~~  252 (1310)
                      ..+|++.+.||+|+||.||+|.+..+|+.||||++..........+.+|+.+|+++. |||||++++++.        ..
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            457999999999999999999999999999999987665555667889999999996 999999999994        44


Q ss_pred             CeEEEEEecCCCCchHHHhhh---cCCCCHHHHHHHHHHHHHHHHHhhhCC--eeecCCCCCCEEeecCCCCeEEEEeec
Q psy5279         253 DSFTIISELAGGGELLHSLTR---QSYYTEYDIAHYIRQLLSGLDYMHRLS--IAHLGLTPGDLLVAHPGGRHLLLTDFG  327 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~---~~~lsE~~i~~ii~QIl~GL~YLHs~g--IVHRDLKPeNILL~~~~~~~VKLsDFG  327 (1310)
                      ..+++||||+. |+|.+.+..   .+.+++.++..++.||+.||.|||++|  |+||||||+|||++.++  .+||+|||
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~--~~kl~Dfg  183 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQG--TIKLCDFG  183 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTS--CEEBCCCT
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCC--CEEEecCc
Confidence            56899999997 678777653   456999999999999999999999999  99999999999998655  79999999


Q ss_pred             cceeecCC
Q psy5279         328 LSRRITSF  335 (1310)
Q Consensus       328 LAr~i~~~  335 (1310)
                      +++.....
T Consensus       184 ~~~~~~~~  191 (337)
T 3ll6_A          184 SATTISHY  191 (337)
T ss_dssp             TCBCCSSC
T ss_pred             cceecccc
Confidence            99987543

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.94  E-value=2.8e-28  Score=277.23  Aligned_cols=147  Identities=18%  Similarity=0.212  Sum_probs=106.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEee---------cCCCcEEEEeeccceeeccC-CcccccCCCCCCcccc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS---------VRSVQVKLIDLGCTQRVTKL-GTLIHPINTPNPEFAA 1017 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~---------~~~~~VKL~DFGlAk~~~~~-g~~~~~~~tGtp~Y~A 1017 (1310)
                      +..++.||+.||+|||++|||||||||+|||++.         .....+||+|||+|+..... .........||+.|||
T Consensus       174 ~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~a  253 (365)
T 3e7e_A          174 VISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQC  253 (365)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCC
T ss_pred             HHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCC
Confidence            4567889999999999999999999999999975         11467999999999765322 1122233467899999


Q ss_pred             cccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcH
Q psy5279        1018 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITL 1096 (1310)
Q Consensus      1018 PEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~ 1096 (1310)
                      ||++.+..|+.++|||||||++|+|++|..||........     .....+...  ..++...+++..++. ++.+|+..
T Consensus       254 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~  326 (365)
T 3e7e_A          254 VEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-----KPEGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPS  326 (365)
T ss_dssp             HHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-----EECSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCC
T ss_pred             hHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-----eechhcccc--CcHHHHHHHHHHHcCCCCCCcchH
Confidence            9999999999999999999999999999999965432110     001111111  235677888888776 44556555


Q ss_pred             HhhhC
Q psy5279        1097 ANNID 1101 (1310)
Q Consensus      1097 ~e~L~ 1101 (1310)
                      .+.+.
T Consensus       327 ~~~l~  331 (365)
T 3e7e_A          327 LDLLR  331 (365)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44443

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.94  E-value=3.3e-26  Score=251.31  Aligned_cols=152  Identities=22%  Similarity=0.347  Sum_probs=133.3

Q ss_pred             CCCeeeeceecccCceEEEEEE----EcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--Ce
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAV----ERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DS  254 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~----~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~  254 (1310)
                      ...|++.+.||+|+||.||+|.    +..+|+.||+|++.... ......+.+|+.+|+.++||||+++++++...  +.
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   99 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   99 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence            4569999999999999999998    57889999999997543 23456788999999999999999999999887  67


Q ss_pred             EEEEEecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         255 FTIISELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +++||||++||+|.+.+.. ...+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+.
T Consensus       100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~  177 (302)
T 4e5w_A          100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH--QVKIGDFGLTKAIE  177 (302)
T ss_dssp             EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT--EEEECCCTTCEECC
T ss_pred             EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCC--CEEECccccccccc
Confidence            9999999999999999854 35699999999999999999999999999999999999998765  89999999999876


Q ss_pred             CC
Q psy5279         334 SF  335 (1310)
Q Consensus       334 ~~  335 (1310)
                      ..
T Consensus       178 ~~  179 (302)
T 4e5w_A          178 TD  179 (302)
T ss_dssp             TT
T ss_pred             CC
Confidence            54

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.94  E-value=4.5e-28  Score=270.11  Aligned_cols=152  Identities=16%  Similarity=0.233  Sum_probs=113.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++....... .......|++.|+|||++.+..++
T Consensus       142 ~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  219 (321)
T 2qkw_B          142 LEICIGAARGLHYLHTRAIIHRDVKSINILLDE--NFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLT  219 (321)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCSTTEEECT--TCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCC
T ss_pred             HHHHHHHHHHHHHhcCCCeecCCCCHHHEEECC--CCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCC
Confidence            456789999999999999999999999999975  56799999999976542221 112233467999999999988999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhc-------ccc------ccc-cccchhccHHHHHHHHHhcc-CCcc
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN-------FVR------YRF-EYLFKELTQEATRFLMLIFK-HEVD 1092 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~-------~~~------~~f-~~~~~~lS~eakdLL~~il~-~~~~ 1092 (1310)
                      .++|||||||++|+|++|..||.+....+....+.       ...      ... .......+.+..+++.+|+. +|.+
T Consensus       220 ~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~  299 (321)
T 2qkw_B          220 EKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSED  299 (321)
T ss_dssp             THHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGG
T ss_pred             cccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCccc
Confidence            99999999999999999999998765432211100       000      001 11234566788899998886 5678


Q ss_pred             hhcHHhhhCC
Q psy5279        1093 WITLANNIDH 1102 (1310)
Q Consensus      1093 rit~~e~L~H 1102 (1310)
                      |+++.+++++
T Consensus       300 Rps~~ell~~  309 (321)
T 2qkw_B          300 RPSMGDVLWK  309 (321)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999887755

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.94  E-value=9.9e-27  Score=259.93  Aligned_cols=152  Identities=22%  Similarity=0.324  Sum_probs=136.1

Q ss_pred             cCCCeeeeceecccCceEEEEEEEc-----CCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVER-----SSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k-----~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~  254 (1310)
                      ..++|++.+.||+|+||.||+|.+.     .+++.||+|++..... ...+.+.+|+.+|++++||||++++++|...+.
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  124 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP  124 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence            4578999999999999999999987     4568999999975432 345678999999999999999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhc------------------------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCC
Q psy5279         255 FTIISELAGGGELLHSLTRQ------------------------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGD  310 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~------------------------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeN  310 (1310)
                      +|+||||++||+|.+.+...                        ..+++.++..++.||+.||.|||++||+||||||+|
T Consensus       125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N  204 (343)
T 1luf_A          125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRN  204 (343)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcce
Confidence            99999999999999998753                        468999999999999999999999999999999999


Q ss_pred             EEeecCCCCeEEEEeeccceeecC
Q psy5279         311 LLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       311 ILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ||++.++  .+||+|||+|+.+..
T Consensus       205 Il~~~~~--~~kl~Dfg~~~~~~~  226 (343)
T 1luf_A          205 CLVGENM--VVKIADFGLSRNIYS  226 (343)
T ss_dssp             EEECGGG--CEEECCCSCHHHHTG
T ss_pred             EEECCCC--eEEEeecCCCccccc
Confidence            9998655  899999999987643

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=4.8e-28  Score=265.31  Aligned_cols=150  Identities=19%  Similarity=0.243  Sum_probs=120.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++.........  ......+++.|+|||++.+..+
T Consensus       113 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  190 (287)
T 1u59_A          113 AELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN--RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF  190 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEE--TTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHHHHCCEeeCCCchheEEEcC--CCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCC
Confidence            345679999999999999999999999999986  457999999999876433221  1233456789999999998889


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|||||||++|+|++ |..||.+.+..+....+....  .+.....++++..+++..|+. ++.+|+++.+++++
T Consensus       191 ~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  266 (287)
T 1u59_A          191 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK--RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR  266 (287)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCC--cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999998 999999988777766654432  122345788999999999887 56679998887765

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.94  E-value=1e-26  Score=262.86  Aligned_cols=154  Identities=19%  Similarity=0.217  Sum_probs=130.0

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcC---CCcEEEEEEEecCCcc-----------hHHHHHHHHHHHHhcCCCCcceEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERS---SGRNYAAKVMTGKGNQ-----------YKSLFKNELDIMNQLCHRNLVRLH  246 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~---Tg~~vAIKiI~~~~~~-----------~~~~~~rEI~IL~~L~HPNIVkL~  246 (1310)
                      ..++|++.+.||+|+||.||+|.+..   ++..+|+|++......           ....+.+|+.+++.++||||++++
T Consensus        35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~  114 (345)
T 2v62_A           35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFY  114 (345)
T ss_dssp             TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEE
T ss_pred             cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceee
Confidence            45789999999999999999999987   8899999998754321           122356789999999999999999


Q ss_pred             EEEEe----CCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEE
Q psy5279         247 DSYET----KDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL  322 (1310)
Q Consensus       247 d~f~~----~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VK  322 (1310)
                      +++..    ...+|+||||| |++|.+.+...+.+++.++..++.||+.||+|||++||+||||||+|||++.++...+|
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~k  193 (345)
T 2v62_A          115 GSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVY  193 (345)
T ss_dssp             EEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEE
T ss_pred             cccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEE
Confidence            99988    78899999999 99999999877789999999999999999999999999999999999999876555899


Q ss_pred             EEeeccceeecCC
Q psy5279         323 LTDFGLSRRITSF  335 (1310)
Q Consensus       323 LsDFGLAr~i~~~  335 (1310)
                      |+|||+|+.+...
T Consensus       194 L~Dfg~a~~~~~~  206 (345)
T 2v62_A          194 LADYGLSYRYCPN  206 (345)
T ss_dssp             ECCCTTCEESSGG
T ss_pred             EEeCCCceecccc
Confidence            9999999987543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.94  E-value=2.6e-28  Score=267.41  Aligned_cols=150  Identities=18%  Similarity=0.278  Sum_probs=108.9

Q ss_pred             HHHHHHHHHHHHHH--------HCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccc---ccCCCCCCccccc
Q psy5279         950 YCVTSVLDGLQYLH--------WRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI---HPINTPNPEFAAP 1018 (1310)
Q Consensus       950 ~i~~QIl~AL~yLH--------s~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~---~~~~tGtp~Y~AP 1018 (1310)
                      .++.||+.||.|||        ++||+||||||+|||++.  +..+||+|||+++.........   .....||+.|+||
T Consensus       109 ~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP  186 (301)
T 3q4u_A          109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK--NGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP  186 (301)
T ss_dssp             HHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECT--TSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCH
T ss_pred             HHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcC--CCCEEEeeCCCeeecccccccccccccccccccceeCh
Confidence            35679999999999        999999999999999985  4579999999997654332221   1223678999999


Q ss_pred             ccccCC------CCCCccchhHHHHHHHHHhcC----------CCCCCCCCh-----hHHHhhhccc--cccccc--cch
Q psy5279        1019 EVLAEE------PIFPQTDVWSAGVLAYVLLSG----------ASPFRGQSE-----PETRQNVNFV--RYRFEY--LFK 1073 (1310)
Q Consensus      1019 Evl~~~------~ys~ksDIWSLGViLyeLLtG----------~~PF~g~~~-----~e~~~~I~~~--~~~f~~--~~~ 1073 (1310)
                      |++.+.      .++.++|||||||++|+|++|          ..||.+...     ......+...  ...++.  ...
T Consensus       187 E~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (301)
T 3q4u_A          187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSD  266 (301)
T ss_dssp             HHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGS
T ss_pred             hhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccC
Confidence            999877      344689999999999999999          899965422     1222211111  111221  223


Q ss_pred             hccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1074 ELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1074 ~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ..++++.+|+.+|+. +|.+|+++.++++
T Consensus       267 ~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          267 PTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             HHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             ccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            467889999999886 5667988887653

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.94  E-value=2.8e-28  Score=265.98  Aligned_cols=153  Identities=17%  Similarity=0.206  Sum_probs=115.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEee-cCCCcEEEEeeccceeeccCCcc------cccCCCCCCcccccccc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTL------IHPINTPNPEFAAPEVL 1021 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~-~~~~~VKL~DFGlAk~~~~~g~~------~~~~~tGtp~Y~APEvl 1021 (1310)
                      ..++.||+.||.|||++||+||||||+|||++. .....+||+|||+++........      ......||+.|+|||++
T Consensus       108 ~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  187 (296)
T 4hgt_A          108 LLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTH  187 (296)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHh
Confidence            456789999999999999999999999999932 12467999999999866433221      12234678999999999


Q ss_pred             cCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhH---HHhhhccccccc--cccchhccHHHHHHHHHhcc-CCcchhc
Q psy5279        1022 AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE---TRQNVNFVRYRF--EYLFKELTQEATRFLMLIFK-HEVDWIT 1095 (1310)
Q Consensus      1022 ~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e---~~~~I~~~~~~f--~~~~~~lS~eakdLL~~il~-~~~~rit 1095 (1310)
                      .+..++.++|||||||++|+|++|..||.+.+...   ....+.......  +.....++++..+++..|+. ++.+|++
T Consensus       188 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt  267 (296)
T 4hgt_A          188 LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPD  267 (296)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCC
T ss_pred             cCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCC
Confidence            99999999999999999999999999998754332   222222222222  22335678999999999886 6678999


Q ss_pred             HHhhhC
Q psy5279        1096 LANNID 1101 (1310)
Q Consensus      1096 ~~e~L~ 1101 (1310)
                      +.++++
T Consensus       268 ~~~l~~  273 (296)
T 4hgt_A          268 YSYLRQ  273 (296)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887664

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.94  E-value=5.2e-28  Score=270.08  Aligned_cols=100  Identities=26%  Similarity=0.401  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  +..+||+|||++........  .......+++.|+|||++.+..++
T Consensus       138 ~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  215 (318)
T 3lxp_A          138 LFAQQICEGMAYLHAQHYIHRDLAARNVLLDN--DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY  215 (318)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--TCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEE
T ss_pred             HHHHHHHHHHHHHHhCCccCCCCchheEEEcC--CCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCC
Confidence            45679999999999999999999999999975  46799999999987643322  122334567889999999998899


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      .++|||||||++|+|++|..||..
T Consensus       216 ~~~Di~slG~il~~ll~g~~p~~~  239 (318)
T 3lxp_A          216 YASDVWSFGVTLYELLTHCDSSQS  239 (318)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             cHHHHHHHHHHHHHHHhCCCcccc
Confidence            999999999999999999999864

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.94  E-value=2.8e-28  Score=273.01  Aligned_cols=150  Identities=21%  Similarity=0.255  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++....... .......+++.|+|||++.+..++
T Consensus       118 ~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  195 (325)
T 3kex_A          118 LNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS--PSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYT  195 (325)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESS--SSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCccchheEEECC--CCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCC
Confidence            445679999999999999999999999999975  45699999999976543322 122333466799999999999999


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      .++|||||||++|+|++ |..||.+....+....+.....  ......+++++.+++.+|+. ++.+|+++.+++++
T Consensus       196 ~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          196 HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGER--LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCB--CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             hhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC--CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999 9999999887777666544321  11224567788999998886 56789999887765

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.94  E-value=2.2e-26  Score=258.29  Aligned_cols=151  Identities=22%  Similarity=0.330  Sum_probs=127.0

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEE----EEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNY----AAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~v----AIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      .++|++.+.||+|+||.||+|.+..+|+.+    |+|.+.... ......+.+|+.+|++++|||||+++++|.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~   92 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence            467999999999999999999999888865    666654322 244567889999999999999999999998765 78


Q ss_pred             EEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         257 IISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      +|+||+.+|+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.....
T Consensus        93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~--~~kl~Dfg~a~~~~~~  170 (327)
T 3poz_A           93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT--EEEECCTTHHHHHTTT
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCC--CEEEccCcceeEccCC
Confidence            999999999999998764 4699999999999999999999999999999999999998765  8999999999987543

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.94  E-value=1.7e-26  Score=252.08  Aligned_cols=152  Identities=20%  Similarity=0.307  Sum_probs=137.2

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCC-------cEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSG-------RNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg-------~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~  253 (1310)
                      ..++|.+.+.||+|+||.||+|.++.++       ..||+|++........+.+.+|+.+|++++|||||++++++.+++
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD   85 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred             chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence            4578999999999999999999999888       479999997665566778999999999999999999999999999


Q ss_pred             eEEEEEecCCCCchHHHhhhcCC-CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCC------eEEEEee
Q psy5279         254 SFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR------HLLLTDF  326 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~-lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~------~VKLsDF  326 (1310)
                      ..++||||+.||+|.+.+..... +++..+..++.||+.||.|||++||+||||||+|||++.++..      .+||+||
T Consensus        86 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df  165 (289)
T 4fvq_A           86 ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP  165 (289)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred             CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccC
Confidence            99999999999999999976654 9999999999999999999999999999999999999876521      2999999


Q ss_pred             ccceee
Q psy5279         327 GLSRRI  332 (1310)
Q Consensus       327 GLAr~i  332 (1310)
                      |+++..
T Consensus       166 g~~~~~  171 (289)
T 4fvq_A          166 GISITV  171 (289)
T ss_dssp             CSCTTT
T ss_pred             cccccc
Confidence            999755

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.94  E-value=5.4e-27  Score=254.64  Aligned_cols=151  Identities=26%  Similarity=0.410  Sum_probs=132.3

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEE--eCCeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYE--TKDSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~--~~~~lyL  257 (1310)
                      .++|++.+.||+|+||.||+|.++.+|+.||+|++....  ....+.+.+|+.+|++++||||+++++++.  ..+.+|+
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            468999999999999999999999999999999997543  234567889999999999999999999885  4678999


Q ss_pred             EEecCCCCchHHHhhhc----CCCCHHHHHHHHHHHHHHHHHhhhCC-----eeecCCCCCCEEeecCCCCeEEEEeecc
Q psy5279         258 ISELAGGGELLHSLTRQ----SYYTEYDIAHYIRQLLSGLDYMHRLS-----IAHLGLTPGDLLVAHPGGRHLLLTDFGL  328 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~----~~lsE~~i~~ii~QIl~GL~YLHs~g-----IVHRDLKPeNILL~~~~~~~VKLsDFGL  328 (1310)
                      ||||++||+|.+.+...    ..+++..+..++.||+.||.|||++|     |+||||||+|||++.++  .+||+|||+
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~--~~kl~dfg~  162 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGL  162 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSS--CEEECCCCH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCC--CEEEecCch
Confidence            99999999999988643    34999999999999999999999999     99999999999998655  799999999


Q ss_pred             ceeecC
Q psy5279         329 SRRITS  334 (1310)
Q Consensus       329 Ar~i~~  334 (1310)
                      ++....
T Consensus       163 ~~~~~~  168 (279)
T 2w5a_A          163 ARILNH  168 (279)
T ss_dssp             HHHC--
T ss_pred             heeecc
Confidence            987643

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.94  E-value=2.1e-26  Score=257.25  Aligned_cols=148  Identities=26%  Similarity=0.415  Sum_probs=131.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEE--EEEEEecCC-cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNY--AAKVMTGKG-NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~v--AIKiI~~~~-~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ++|++.+.||+|+||.||+|.++.+|..+  |+|.+.... ......+.+|+.+|+++ +||||+++++++.+.+.+|+|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            67999999999999999999999999866  999887532 23445688999999999 999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcC----------------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEE
Q psy5279         259 SELAGGGELLHSLTRQS----------------YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL  322 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~----------------~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VK  322 (1310)
                      |||++||+|.+.+....                .+++.++..++.||+.||.|||++||+||||||+|||++.++  .+|
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~--~~k  182 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY--VAK  182 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG--CEE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCC--eEE
Confidence            99999999999987643                699999999999999999999999999999999999998654  799


Q ss_pred             EEeeccceee
Q psy5279         323 LTDFGLSRRI  332 (1310)
Q Consensus       323 LsDFGLAr~i  332 (1310)
                      |+|||+++..
T Consensus       183 L~Dfg~~~~~  192 (327)
T 1fvr_A          183 IADFGLSRGQ  192 (327)
T ss_dssp             ECCTTCEESS
T ss_pred             EcccCcCccc
Confidence            9999999854

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.94  E-value=1.1e-26  Score=260.02  Aligned_cols=151  Identities=21%  Similarity=0.306  Sum_probs=130.6

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcE----EEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRN----YAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~----vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      .++|++.+.||+|+||.||+|.++.+|+.    ||+|.+.... ......+.+|+.+|+.++|||||++++++. .+.++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~   90 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ   90 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence            46899999999999999999999998886    6667664332 222345678999999999999999999986 56799


Q ss_pred             EEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         257 IISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      +||||+.+|+|.+.+... +.+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+...
T Consensus        91 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~--~~kl~Dfg~a~~~~~~  168 (325)
T 3kex_A           91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPS--QVQVADFGVADLLPPD  168 (325)
T ss_dssp             EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSS--CEEECSCSGGGGSCCC
T ss_pred             EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCC--eEEECCCCcccccCcc
Confidence            999999999999998764 4699999999999999999999999999999999999997655  7999999999987543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.94  E-value=2e-26  Score=260.47  Aligned_cols=164  Identities=21%  Similarity=0.347  Sum_probs=137.5

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC-----------CCCcceEEEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-----------HRNLVRLHDSYE  250 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~-----------HPNIVkL~d~f~  250 (1310)
                      .++|++.+.||+|+||.||+|.++.+|+.||||++... ......+.+|+.+|+++.           ||||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            46899999999999999999999999999999999743 234566789999999887           899999999998


Q ss_pred             eCC----eEEEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCCEEeecCC----CC
Q psy5279         251 TKD----SFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRL-SIAHLGLTPGDLLVAHPG----GR  319 (1310)
Q Consensus       251 ~~~----~lyLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~-gIVHRDLKPeNILL~~~~----~~  319 (1310)
                      ..+    .+++||||+ |++|.+.+...  ..+++..+..++.||+.||+|||++ ||+||||||+|||++.++    ..
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~  175 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLI  175 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcc
Confidence            765    799999999 88999988753  4599999999999999999999998 999999999999996432    23


Q ss_pred             eEEEEeeccceeecCCCCCCCcccchHHHh
Q psy5279         320 HLLLTDFGLSRRITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       320 ~VKLsDFGLAr~i~~~~~l~~~~~t~~yv~  349 (1310)
                      .+||+|||+|+.....  ....++|+.|++
T Consensus       176 ~~kl~Dfg~a~~~~~~--~~~~~~t~~y~a  203 (373)
T 1q8y_A          176 QIKIADLGNACWYDEH--YTNSIQTREYRS  203 (373)
T ss_dssp             EEEECCCTTCEETTBC--CCSCCSCGGGCC
T ss_pred             eEEEcccccccccCCC--CCCCCCCccccC
Confidence            7999999999876542  233355555543

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.94  E-value=6.5e-28  Score=263.60  Aligned_cols=154  Identities=17%  Similarity=0.200  Sum_probs=116.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEee-cCCCcEEEEeeccceeeccCCcc------cccCCCCCCccccccc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS-VRSVQVKLIDLGCTQRVTKLGTL------IHPINTPNPEFAAPEV 1020 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~-~~~~~VKL~DFGlAk~~~~~g~~------~~~~~tGtp~Y~APEv 1020 (1310)
                      ...++.||+.||+|||++||+||||||+|||++. .....+||+|||++.........      ......|++.|+|||+
T Consensus       107 ~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  186 (296)
T 3uzp_A          107 VLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT  186 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhh
Confidence            3456789999999999999999999999999952 12467999999999766433221      1233467899999999


Q ss_pred             ccCCCCCCccchhHHHHHHHHHhcCCCCCCCCCh---hHHHhhhccccccc--cccchhccHHHHHHHHHhcc-CCcchh
Q psy5279        1021 LAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE---PETRQNVNFVRYRF--EYLFKELTQEATRFLMLIFK-HEVDWI 1094 (1310)
Q Consensus      1021 l~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~---~e~~~~I~~~~~~f--~~~~~~lS~eakdLL~~il~-~~~~ri 1094 (1310)
                      +.+..++.++|||||||++|+|++|..||.+.+.   .+....+.......  +.....++++..+++.+|+. ++.+|+
T Consensus       187 ~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  266 (296)
T 3uzp_A          187 HLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKP  266 (296)
T ss_dssp             HTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCC
T ss_pred             hcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCC
Confidence            9999999999999999999999999999987433   22333332222222  22345688999999999886 667788


Q ss_pred             cHHhhhC
Q psy5279        1095 TLANNID 1101 (1310)
Q Consensus      1095 t~~e~L~ 1101 (1310)
                      ++.++++
T Consensus       267 s~~~l~~  273 (296)
T 3uzp_A          267 DYSYLRQ  273 (296)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            8877653

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.94  E-value=5.6e-28  Score=267.22  Aligned_cols=150  Identities=21%  Similarity=0.284  Sum_probs=104.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++......... .....|++.|+|||++.+..++
T Consensus       138 ~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~--~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~  214 (310)
T 2wqm_A          138 VWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTA-AHSLVGTPYYMSPERIHENGYN  214 (310)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TSCEEECCC-------------------CCSSCCHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcC--CCCEEEEeccceeeecCCCcc-ccccCCCeeEeChHHhCCCCCC
Confidence            3456789999999999999999999999999975  457999999998765432211 1223567999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCCh--hHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSE--PETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~--~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      .++|||||||++|+|++|..||.+...  ......+....+. +.....+++++++++.+|+. ++.+|+++.++++
T Consensus       215 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          215 FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP-PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSC-CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCC-CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            999999999999999999999987543  2333333222211 11235678999999999887 5667988888764

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.94  E-value=6.2e-28  Score=267.22  Aligned_cols=151  Identities=17%  Similarity=0.235  Sum_probs=114.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++....... .......+++.|+|||++.+..+
T Consensus       149 ~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  226 (313)
T 3brb_A          149 LLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRD--DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVY  226 (313)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECT--TSCEEECSCSCC----------------CCGGGSCHHHHHSSCC
T ss_pred             HHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC--CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCc
Confidence            4556789999999999999999999999999975  45799999999876543221 11223345678999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|||||||++|+|++ |..||.+....+....+....  .+.....++++..+++.+|+. ++.+|+++.+++.+
T Consensus       227 ~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          227 TSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH--RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC--CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             cchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCC--CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999 999999988777666554332  122335688999999999886 56678888887643

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.94  E-value=1.3e-27  Score=274.75  Aligned_cols=149  Identities=17%  Similarity=0.307  Sum_probs=107.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++.......  .....+.+++.|+|||++.+..+
T Consensus       150 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  227 (373)
T 2qol_A          150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINS--NLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF  227 (373)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT--TCCEEECCC----------------------CTTSCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcC--CCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCc
Confidence            345779999999999999999999999999975  46799999999876543221  11223345678999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|||||||++|+|++ |..||.+.+..+....+... ...+ ....++.+..+++..|+. ++.+|+++.+++.
T Consensus       228 ~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~-~~~~-~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLP-PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             CHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTT-EECC-CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCC-CCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            999999999999999998 99999998887776655432 1222 234678899999999886 5667888887664

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.94  E-value=5e-26  Score=254.25  Aligned_cols=152  Identities=22%  Similarity=0.344  Sum_probs=136.8

Q ss_pred             CCCeeeeceecccCceEEEEEE----EcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEE--eCCeE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAV----ERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE--TKDSF  255 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~----~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~--~~~~l  255 (1310)
                      .++|++.+.||+|+||.||+|.    +..+++.||||++........+.+.+|+.+|++++||||+++++++.  ..+.+
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            3689999999999999999998    57789999999998766566677899999999999999999999987  45679


Q ss_pred             EEEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         256 TIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+||||++||+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+....
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~~~~~~~  179 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA--HVKIADFGLAKLLPL  179 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT--EEEECCGGGCEECCT
T ss_pred             EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCC--CEEEcccccceeccc
Confidence            9999999999999998763 4599999999999999999999999999999999999998765  899999999998754


Q ss_pred             C
Q psy5279         335 F  335 (1310)
Q Consensus       335 ~  335 (1310)
                      .
T Consensus       180 ~  180 (327)
T 3lxl_A          180 D  180 (327)
T ss_dssp             T
T ss_pred             C
Confidence            3

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.94  E-value=7.5e-28  Score=269.27  Aligned_cols=101  Identities=23%  Similarity=0.364  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++.........  ......+++.|+|||++.+..+
T Consensus       148 ~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  225 (326)
T 2w1i_A          148 LQYTSQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKF  225 (326)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE--TTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHHHhCCEeccCCCcceEEEcC--CCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCC
Confidence            345679999999999999999999999999986  457999999999766433221  1223345678999999998889


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      +.++|||||||++|+|++|..||..
T Consensus       226 ~~~~Di~slG~il~el~tg~~~~~~  250 (326)
T 2w1i_A          226 SVASDVWSFGVVLYELFTYIEKSKS  250 (326)
T ss_dssp             EHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred             CchhhHHHHHHHHHHHHhcCCCCCC
Confidence            9999999999999999999999853

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.94  E-value=3.4e-26  Score=247.91  Aligned_cols=149  Identities=21%  Similarity=0.316  Sum_probs=133.5

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .++|++.+.||+|+||.||+|.+. +++.||+|++.... ...+.+.+|+.+|++++||||+++++++.+.+.+|+||||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   86 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             hhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence            367999999999999999999987 57789999997543 3346688999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++||+|.+.+... ..+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+|+....
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~  158 (269)
T 4hcu_A           87 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ--VIKVSDFGMTRFVLD  158 (269)
T ss_dssp             CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGG--CEEECCTTGGGGBCC
T ss_pred             CCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCC--CEEeccccccccccc
Confidence            9999999998654 4589999999999999999999999999999999999997654  799999999986643

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.94  E-value=4e-28  Score=271.22  Aligned_cols=149  Identities=18%  Similarity=0.264  Sum_probs=117.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++......  ......+++.|+|||++.+..++
T Consensus       144 ~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~--~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~  219 (327)
T 1fvr_A          144 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYT  219 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG--GGCEEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEEC
T ss_pred             HHHHHHHHHHHHHHHHhCCccCCCCccceEEEcC--CCeEEEcccCcCccccccc--cccCCCCCccccChhhhccccCC
Confidence            4567889999999999999999999999999975  4569999999986432211  12234457899999999988899


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      .++|||||||++|+|++ |..||.+.+..+....+.... .. .....+++++++|+.+|+. ++.+|+++.+++.+
T Consensus       220 ~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          220 TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-RL-EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC-CC-CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             chhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCC-CC-CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99999999999999998 999999988877766654431 11 1234678999999999887 56679999887764

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.94  E-value=5.5e-26  Score=245.73  Aligned_cols=151  Identities=20%  Similarity=0.278  Sum_probs=134.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ..++|++.+.||+|+||.||+|.++ ++..||+|++..... ..+.+.+|+.+|++++||||+++++++...+.+++|||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE   83 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence            3478999999999999999999765 577899999975433 34568899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         261 LAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |++||+|.+.+...+ .+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.....
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~--~~~l~Dfg~~~~~~~~  157 (268)
T 3sxs_A           84 YISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDL--CVKVSDFGMTRYVLDD  157 (268)
T ss_dssp             CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTC--CEEECCTTCEEECCTT
T ss_pred             ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCC--CEEEccCccceecchh
Confidence            999999999987654 499999999999999999999999999999999999998655  7999999999876543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.93  E-value=7.9e-28  Score=258.66  Aligned_cols=144  Identities=16%  Similarity=0.270  Sum_probs=112.8

Q ss_pred             HHHHHHHHHHHHHHHHCC--ceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRG--LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~g--IVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||.|||++|  |+||||||+|||++.  ++.+||+|||++.....      ....||+.|+|||++.+..+
T Consensus       114 ~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~--~~~~~l~~~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~  185 (271)
T 3kmu_A          114 VKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDE--DMTARISMADVKFSFQS------PGRMYAPAWVAPEALQKKPE  185 (271)
T ss_dssp             HHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECT--TSCEEEEGGGSCCTTSC------TTCBSCGGGSCHHHHHSCGG
T ss_pred             HHHHHHHHHHHHHHhcCCCceecCCCccceEEEcC--CcceeEEeccceeeecc------cCccCCccccChhhhccCCC
Confidence            445779999999999999  999999999999985  45688988887643221      12346799999999988766


Q ss_pred             CC---ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FP---QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~---ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.   ++|||||||++|+|++|..||.+.+..+....+....... .....++++..+++.+|+. ++.+|+++.++++
T Consensus       186 ~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          186 DTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP-TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            55   7999999999999999999999988777655544333222 2345789999999999887 4567888887653

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.93  E-value=1.1e-26  Score=258.74  Aligned_cols=167  Identities=20%  Similarity=0.274  Sum_probs=138.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ...++|++.+.||+|+||.||+|.+ .+|+.||||++..... .....+.+|+.+|+.++||||+++++++...+..++|
T Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv  105 (326)
T 3uim_A           27 VASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV  105 (326)
T ss_dssp             TTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEE
T ss_pred             HHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEE
Confidence            4568899999999999999999974 4699999999875432 2233588999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcC----CCCHHHHHHHHHHHHHHHHHhhhC---CeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         259 SELAGGGELLHSLTRQS----YYTEYDIAHYIRQLLSGLDYMHRL---SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~----~lsE~~i~~ii~QIl~GL~YLHs~---gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                      |||+.||+|.+.+....    .+++..+..++.||+.||.|||++   ||+||||||+|||++.++  .+||+|||+|+.
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~--~~kl~Dfg~~~~  183 (326)
T 3uim_A          106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF--EAVVGDFGLAKL  183 (326)
T ss_dssp             EECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC--CEEECCCSSCEE
T ss_pred             EEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC--CEEeccCccccc
Confidence            99999999999987543    389999999999999999999999   999999999999998654  799999999997


Q ss_pred             ecCCC--CCCCcccchHHHh
Q psy5279         332 ITSFG--KLNPLEYDVRYVR  349 (1310)
Q Consensus       332 i~~~~--~l~~~~~t~~yv~  349 (1310)
                      .....  .....++|+.|++
T Consensus       184 ~~~~~~~~~~~~~gt~~y~a  203 (326)
T 3uim_A          184 MDYKDTHVTTAVRGTIGHIA  203 (326)
T ss_dssp             CCSSSSCEECCCCSCGGGCC
T ss_pred             cCcccccccccccCCcCccC
Confidence            65322  2223345554443

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.93  E-value=6.2e-28  Score=270.84  Aligned_cols=150  Identities=19%  Similarity=0.228  Sum_probs=117.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++........ ......+|+.|+|||++.+..++
T Consensus       120 ~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  197 (327)
T 3poz_A          120 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT  197 (327)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE--TTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHhhCCeeCCCCChheEEECC--CCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCC
Confidence            345679999999999999999999999999986  457999999999765432221 22334567899999999999999


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      .++|||||||++|+|++ |..||.+.+..+....+..... . ......+.++.+++.+|+. ++.+|+++.+++.+
T Consensus       198 ~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-L-PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC-C-CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             chhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCC-C-CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            99999999999999999 9999999887776665543321 1 1234678899999999886 56679999887754

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.93  E-value=3.4e-26  Score=251.93  Aligned_cols=153  Identities=24%  Similarity=0.376  Sum_probs=136.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEE-----cCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhc-CCCCcceEEEEEEeCC
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVE-----RSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQL-CHRNLVRLHDSYETKD  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~-----k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~  253 (1310)
                      ..++|++.+.||+|+||.||+|.+     ..+++.||+|++..... ...+.+.+|+.+|++| +||||+++++++..++
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            347899999999999999999985     46788999999975433 3456788999999999 9999999999999999


Q ss_pred             eEEEEEecCCCCchHHHhhhcC------------------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeec
Q psy5279         254 SFTIISELAGGGELLHSLTRQS------------------YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH  315 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~------------------~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~  315 (1310)
                      ..++||||+++|+|.+.+....                  .+++.++..++.||+.||.|||++||+||||||+|||++.
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  180 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH  180 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEET
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcC
Confidence            9999999999999999987543                  3899999999999999999999999999999999999986


Q ss_pred             CCCCeEEEEeeccceeecCC
Q psy5279         316 PGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       316 ~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ++  .+||+|||+|+.....
T Consensus       181 ~~--~~kl~Dfg~~~~~~~~  198 (313)
T 1t46_A          181 GR--ITKICDFGLARDIKND  198 (313)
T ss_dssp             TT--EEEECCCGGGSCTTSC
T ss_pred             CC--CEEEcccccccccccc
Confidence            55  8999999999877554

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.93  E-value=1e-27  Score=263.24  Aligned_cols=147  Identities=20%  Similarity=0.256  Sum_probs=116.8

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccCCCCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      .++.||+.||.|||++||+||||||+|||++.  +..+||+|||++.........  ....+.+++.|+|||++.+..++
T Consensus       121 ~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  198 (291)
T 1xbb_A          121 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS  198 (291)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE--TTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEE
T ss_pred             HHHHHHHHHHHHHHhCCeEcCCCCcceEEEeC--CCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCC
Confidence            35679999999999999999999999999986  457999999999766433221  12234556889999999988899


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      .++|||||||++|+|++ |..||.+.+..+....+....  .+.....++++..+++.+|+. ++.+|+++.+++
T Consensus       199 ~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~  271 (291)
T 1xbb_A          199 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE--RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE  271 (291)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             hhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            99999999999999999 999999988877766654432  122335688999999999886 567788887765

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.93  E-value=9.1e-27  Score=283.40  Aligned_cols=161  Identities=17%  Similarity=0.100  Sum_probs=130.2

Q ss_pred             eeceecccCceEEEEEEEcCCCcEEEEEEEecCC----------cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeE
Q psy5279         187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG----------NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       187 i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~----------~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~l  255 (1310)
                      ....++.|++|.+..++..-+|+.||||++.+..          ....+.+.+|+++|+++ .||||++|++++++++.+
T Consensus       238 w~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~  317 (569)
T 4azs_A          238 WQNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSG  317 (569)
T ss_dssp             EECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEE
T ss_pred             hhhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEE
Confidence            3456789999999998888999999999997542          12345689999999999 799999999999999999


Q ss_pred             EEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         256 TIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |||||||+||+|.+.+.+.+.+++.   .+++||+.||+|||++|||||||||+||||+.++  .|||+|||+|+.....
T Consensus       318 yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg--~vKL~DFGlAr~~~~~  392 (569)
T 4azs_A          318 WLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQ--HARLIDFGSIVTTPQD  392 (569)
T ss_dssp             EEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTS--CEEECCCTTEESCC--
T ss_pred             EEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCC--CEEEeecccCeeCCCC
Confidence            9999999999999999988888765   4789999999999999999999999999998765  8999999999987543


Q ss_pred             -CCCCCcccchHHHhhhc
Q psy5279         336 -GKLNPLEYDVRYVRQAL  352 (1310)
Q Consensus       336 -~~l~~~~~t~~yv~~~~  352 (1310)
                       ....+.+||+.|+++..
T Consensus       393 ~~~~~t~vGTp~YmAPE~  410 (569)
T 4azs_A          393 CSWPTNLVQSFFVFVNEL  410 (569)
T ss_dssp             -CCSHHHHHHHHHHHHHH
T ss_pred             CccccCceechhhccHHH
Confidence             34566889999988643

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.93  E-value=3.1e-28  Score=265.73  Aligned_cols=145  Identities=17%  Similarity=0.207  Sum_probs=107.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCC------CcEEEEeeccceeeccCCcccccCCCCCCccccccccc
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRS------VQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA 1022 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~------~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~ 1022 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.++.      ..+||+|||++.......     ...+++.|+|||++.
T Consensus       116 ~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~y~aPE~~~  190 (289)
T 4fvq_A          116 LEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD-----ILQERIPWVPPECIE  190 (289)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHH-----HHHHTTTTSCHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCcc-----ccCCcCcccCHHHhC
Confidence            345679999999999999999999999999986432      129999999986442211     112568899999998


Q ss_pred             C-CCCCCccchhHHHHHHHHHhcC-CCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhh
Q psy5279        1023 E-EPIFPQTDVWSAGVLAYVLLSG-ASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANN 1099 (1310)
Q Consensus      1023 ~-~~ys~ksDIWSLGViLyeLLtG-~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~ 1099 (1310)
                      + ..++.++|||||||++|+|++| .+||............. ....+   ....+++..+++.+|+. ++.+|+++.++
T Consensus       191 ~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l  266 (289)
T 4fvq_A          191 NPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE-DRHQL---PAPKAAELANLINNCMDYEPDHRPSFRAI  266 (289)
T ss_dssp             CGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TTCCC---CCCSSCTTHHHHHHHSCSSGGGSCCHHHH
T ss_pred             CCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh-ccCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            7 6788999999999999999995 55665554443332222 22222   23457788999999887 55679999887


Q ss_pred             hCC
Q psy5279        1100 IDH 1102 (1310)
Q Consensus      1100 L~H 1102 (1310)
                      ++|
T Consensus       267 l~~  269 (289)
T 4fvq_A          267 IRD  269 (289)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            755

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.93  E-value=4.5e-26  Score=248.32  Aligned_cols=150  Identities=25%  Similarity=0.370  Sum_probs=131.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      -.++|++.+.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|+.+|++++||||+++++++.+.+.+|+|||
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   99 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE   99 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence            3468999999999999999999876 677899999975432 34668899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         261 LAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       261 y~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+.||+|.+.+.. ...+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+....
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~--~~kl~Dfg~~~~~~~  172 (283)
T 3gen_A          100 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG--VVKVSDFGLSRYVLD  172 (283)
T ss_dssp             CCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTS--CEEECSTTGGGGBCC
T ss_pred             ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCC--CEEEccccccccccc
Confidence            9999999999876 45699999999999999999999999999999999999998655  799999999987643

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.93  E-value=5.8e-28  Score=269.70  Aligned_cols=151  Identities=17%  Similarity=0.233  Sum_probs=116.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||++......... ......+++.|+|||++.+..+
T Consensus       166 ~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  243 (333)
T 2i1m_A          166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN--GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY  243 (333)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEG--GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHhcCCcccCCcccceEEECC--CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCC
Confidence            4567789999999999999999999999999986  457999999999765432221 1222335678999999999899


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|||||||++|+|++ |..||.+.........+.......+ .....+++..+++..|+. ++.+|+++.++++
T Consensus       244 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          244 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMA-QPAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCC-CCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            999999999999999998 9999998765554433332222221 234568899999999887 5667999888764

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.93  E-value=2e-26  Score=264.53  Aligned_cols=150  Identities=26%  Similarity=0.407  Sum_probs=135.5

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      .+.|.+.+.||+|+||.||+|.++.+|+.||||++..... .....+.+|+.+|++++|||||++++++...+.+|||||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            4689999999999999999999999999999999875422 234457899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         261 LAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ||+||+|.+.+...+ .+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+...
T Consensus       193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~--~~kl~DfG~s~~~~  264 (377)
T 3cbl_A          193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN--VLKISDFGMSREEA  264 (377)
T ss_dssp             CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC--CEEECCGGGCEECT
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCC--cEEECcCCCceecC
Confidence            999999999987654 499999999999999999999999999999999999998655  89999999998754

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.93  E-value=2.3e-26  Score=253.91  Aligned_cols=163  Identities=21%  Similarity=0.291  Sum_probs=119.5

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~--~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .++|++.+.||+|+||.||+|.++.+|+.||||++......  ....+..+..+++.++||||+++++++...+.+|+||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            36799999999999999999999999999999999765332  2233445556788899999999999999999999999


Q ss_pred             ecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCC
Q psy5279         260 ELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRL-SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~-gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      ||+ ++.+...... ...+++..+..++.||+.||.|||++ ||+||||||+|||++.++  .+||+|||+++.+.....
T Consensus       104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~--~~kl~dfg~~~~~~~~~~  180 (318)
T 2dyl_A          104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG--QIKLCDFGISGRLVDDKA  180 (318)
T ss_dssp             CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTS--CEEECCCTTC--------
T ss_pred             ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCC--CEEEEECCCchhccCCcc
Confidence            999 4444444332 45699999999999999999999995 999999999999998655  799999999987654433


Q ss_pred             CCCcccchHH
Q psy5279         338 LNPLEYDVRY  347 (1310)
Q Consensus       338 l~~~~~t~~y  347 (1310)
                      ....++|+.|
T Consensus       181 ~~~~~~~~~y  190 (318)
T 2dyl_A          181 KDRSAGCAAY  190 (318)
T ss_dssp             ------CCTT
T ss_pred             ccccCCCccc
Confidence            3333444443

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.93  E-value=1.7e-27  Score=264.98  Aligned_cols=145  Identities=19%  Similarity=0.303  Sum_probs=107.0

Q ss_pred             HHHHHHHHHHHHHHH---CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCC
Q psy5279         950 YCVTSVLDGLQYLHW---RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs---~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      .++.||+.||.|||+   +||+||||||+|||++.+ ...+||+|||++.......    ....|++.|+|||++.+..+
T Consensus       106 ~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~-~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~  180 (307)
T 2eva_A          106 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG-GTVLKICDFGTACDIQTHM----TNNKGSAAWMAPEVFEGSNY  180 (307)
T ss_dssp             HHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETT-TTEEEECCCCC----------------CCTTSSCHHHHTCCCC
T ss_pred             HHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCC-CCEEEEccccccccccccc----ccCCCCCceEChhhhCCCCC
Confidence            456799999999999   899999999999999853 2348999999987543211    12347899999999999999


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHH--HhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPET--RQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~--~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|||||||++|+|++|..||........  ...+..  ...+.....++++..+++.+|+. ++.+|+++.++++
T Consensus       181 ~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN--GTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             CTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHT--TCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhc--CCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            9999999999999999999999986543322  111111  12233446788999999999886 5667988888765

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.93  E-value=1.9e-27  Score=267.53  Aligned_cols=149  Identities=19%  Similarity=0.217  Sum_probs=112.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ...+||+|||+++....... .......+++.|+|||++.+..++
T Consensus       120 ~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~--~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  197 (327)
T 3lzb_A          120 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT  197 (327)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE--TTEEEECCTTC----------------CCCGGGSCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcC--CCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCC
Confidence            445679999999999999999999999999986  45799999999976543222 122334567789999999999999


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      .++|||||||++|+|++ |..||.+....+....+.....  ......++++..+++.+|+. ++.+|+++.+++.
T Consensus       198 ~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER--LPQPPICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC--CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC--CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999 9999999888777665543321  11235678899999999887 5567999888764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.93  E-value=6.5e-26  Score=260.40  Aligned_cols=154  Identities=23%  Similarity=0.366  Sum_probs=135.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCC-------cEEEEEEEecCCc-chHHHHHHHHHHHHhc-CCCCcceEEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSG-------RNYAAKVMTGKGN-QYKSLFKNELDIMNQL-CHRNLVRLHDSYE  250 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg-------~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~  250 (1310)
                      ...++|.+.+.||+|+||.||+|.+..++       ..||+|++..... .....+.+|+.+|+.+ +|||||+++++|.
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~  145 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT  145 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence            34578999999999999999999976443       5799999975432 3446688999999999 9999999999999


Q ss_pred             eCCeEEEEEecCCCCchHHHhhhcC----------------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEee
Q psy5279         251 TKDSFTIISELAGGGELLHSLTRQS----------------YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA  314 (1310)
Q Consensus       251 ~~~~lyLVmEy~~GGeL~~~l~~~~----------------~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~  314 (1310)
                      .++.+|+||||++||+|.+.+....                .+++.++..++.||+.||.|||++||+||||||+|||++
T Consensus       146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~  225 (382)
T 3tt0_A          146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT  225 (382)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred             cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEc
Confidence            9999999999999999999987643                499999999999999999999999999999999999998


Q ss_pred             cCCCCeEEEEeeccceeecCC
Q psy5279         315 HPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       315 ~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      .++  .+||+|||+|+.....
T Consensus       226 ~~~--~~kL~DFG~a~~~~~~  244 (382)
T 3tt0_A          226 EDN--VMKIADFGLARDIHHI  244 (382)
T ss_dssp             TTC--CEEECSCSCCCCSSCC
T ss_pred             CCC--cEEEcccCcccccccc
Confidence            655  7999999999876543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.93  E-value=1.2e-27  Score=281.93  Aligned_cols=149  Identities=17%  Similarity=0.266  Sum_probs=113.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||+++..............+++.|+|||++.+..++.
T Consensus       283 ~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  360 (452)
T 1fmk_A          283 VDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI  360 (452)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG--GGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHHHHhCCeeCCCCChhhEEECC--CCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCc
Confidence            345679999999999999999999999999975  456999999999765432222222234567899999999889999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++|||||||++|+|++ |..||.+.+..+....+... ++.+ ....++++..+++.+|+. ++.+|+++.+++.
T Consensus       361 ~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-~~~~-~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP-CPPECPESLHDLMCQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-CCCC-CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCC-CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999 99999998887776665432 2222 234678999999999887 5567888877653

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=1.7e-27  Score=268.33  Aligned_cols=150  Identities=17%  Similarity=0.291  Sum_probs=112.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++.......  .....+.+++.|+|||++.+..+
T Consensus       150 ~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  227 (333)
T 1mqb_A          150 VGMLRGIAAGMKYLANMNYVHRDLAARNILVNS--NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKF  227 (333)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT--TCCEEECCCCC-----------------CCCGGGSCHHHHHSCCC
T ss_pred             HHHHHHHHHHHHHHHhCCeeCCCCChheEEECC--CCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCC
Confidence            345679999999999999999999999999975  56799999999876543211  11223345678999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      +.++|||||||++|+|++ |..||.+.+..+....+.... ..+ ....++++..+++.+|+. ++.+|+++.+++.+
T Consensus       228 ~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~-~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          228 TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF-RLP-TPMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-CCC-CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             CchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCC-cCC-CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999998 999999888777766654331 122 234678899999999886 56678888876643

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.93  E-value=2.4e-26  Score=254.86  Aligned_cols=218  Identities=14%  Similarity=0.047  Sum_probs=160.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||||++.....   .....+.+|+.+|++++|||||++++++...+.+|
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  107 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL  107 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence            466889999999999999999999999999999999975432   23466889999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      +||||++|++|.+.+..  ...+.++..++.||+.||+|||++||+||||||+|||++.++  .+||+++|.....+.. 
T Consensus       108 lv~e~~~g~~L~~~l~~--~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g--~~kl~~~~~~~~~~~~-  182 (286)
T 3uqc_A          108 VVAEWIRGGSLQEVADT--SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDG--DVVLAYPATMPDANPQ-  182 (286)
T ss_dssp             EEEECCCEEEHHHHHTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTS--CEEECSCCCCTTCCHH-
T ss_pred             EEEEecCCCCHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCC--CEEEEeccccCCCCch-
Confidence            99999999999999854  356778899999999999999999999999999999998765  7999987765321100 


Q ss_pred             CCCCcccc---hHHHhhhcCCCccccCCCCCC-------CCCCCcchhhhhhhcccchhhchhhhhhhcccCCCCCCccC
Q psy5279         337 KLNPLEYD---VRYVRQALRHPWLNFADRKPT-------EDTPKLNTDALRNYYNLYKDWYGNAAVRRYYRRRPLNSCYT  406 (1310)
Q Consensus       337 ~l~~~~~t---~~yv~~~~r~P~l~~~~~~~~-------~~~p~~~~~~~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~  406 (1310)
                         .-.+.   .-|....++.||-........       ...+........++...+.+++...+..+...| ++.+++.
T Consensus       183 ---~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          183 ---DDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             ---HHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred             ---hHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence               00111   123334566777543322111       000111111112344455677677777777788 7766543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.93  E-value=8.6e-26  Score=249.71  Aligned_cols=152  Identities=26%  Similarity=0.407  Sum_probs=128.6

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ..++|++.+.||+|+||.||+|.+..+|+.||+|++....   ......+.+|+.+|+.++||||+++++++...+.+++
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l  109 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI  109 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence            4467999999999999999999999999999999997532   2345668899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         258 ISELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ||||+.+|+|.+.+..    ...+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus       110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~--~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG--VVKLGDLGLGRFFS  187 (310)
T ss_dssp             EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--CEEECCC-------
T ss_pred             EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCC--CEEEEeccceeeec
Confidence            9999999999888753    45699999999999999999999999999999999999998655  79999999998765


Q ss_pred             C
Q psy5279         334 S  334 (1310)
Q Consensus       334 ~  334 (1310)
                      .
T Consensus       188 ~  188 (310)
T 2wqm_A          188 S  188 (310)
T ss_dssp             -
T ss_pred             C
Confidence            4

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.93  E-value=1.3e-27  Score=262.34  Aligned_cols=149  Identities=17%  Similarity=0.219  Sum_probs=113.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc---ccccCCCCCCcccccccccCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT---LIHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~---~~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++.......   .......+++.|+|||++.+..
T Consensus       131 ~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  208 (298)
T 3f66_A          131 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK  208 (298)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT--TCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHhCCccCCCCchheEEECC--CCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCC
Confidence            345679999999999999999999999999975  55799999999976533211   1112234567899999999999


Q ss_pred             CCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++.++|||||||++|+|++ |.+||.+.+..+....+......  .....++++..+++.+|+. ++.+|+++.++++
T Consensus       209 ~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          209 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL--LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCC--CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999 77888887766655544433221  1234578899999999887 4567888877653

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.93  E-value=1.8e-27  Score=261.36  Aligned_cols=151  Identities=18%  Similarity=0.317  Sum_probs=107.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccC-CcccccCCCCCCccccccccc---CC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL-GTLIHPINTPNPEFAAPEVLA---EE 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~-g~~~~~~~tGtp~Y~APEvl~---~~ 1024 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++...... +........||+.|+|||++.   +.
T Consensus       123 ~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  200 (289)
T 3og7_A          123 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHE--DNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN  200 (289)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET--TTEEEECCCC------------------CCCTTCCHHHHC----C
T ss_pred             HHHHHHHHHHHHHHHhCCcccccCccceEEECC--CCCEEEccceeccccccccccccccccCCCccccCchhhcccCCC
Confidence            345679999999999999999999999999985  467999999998754321 111222345789999999997   56


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhHH-Hhhhccccc--cccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET-RQNVNFVRY--RFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~-~~~I~~~~~--~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      .++.++|||||||++|+|++|..||.+....+. ...+.....  .+......++++.++|+..|+. ++.+|+++.+++
T Consensus       201 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell  280 (289)
T 3og7_A          201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL  280 (289)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            688899999999999999999999988655443 333322222  2223445788999999999887 556788888765


Q ss_pred             C
Q psy5279        1101 D 1101 (1310)
Q Consensus      1101 ~ 1101 (1310)
                      +
T Consensus       281 ~  281 (289)
T 3og7_A          281 A  281 (289)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.93  E-value=4.1e-26  Score=249.96  Aligned_cols=162  Identities=23%  Similarity=0.329  Sum_probs=134.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHh--cCCCCcceEEEEEEe----CC
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQ--LCHRNLVRLHDSYET----KD  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~--L~HPNIVkL~d~f~~----~~  253 (1310)
                      .+.++|++.+.||+|+||.||+|.+  +|+.||||++...   ....+.+|.+++..  ++||||+++++++..    ..
T Consensus         5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~   79 (301)
T 3q4u_A            5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST   79 (301)
T ss_dssp             CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred             cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence            4678899999999999999999986  7999999998643   33455667777776  899999999998654    35


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhh--------hCCeeecCCCCCCEEeecCCCCeEEEEe
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH--------RLSIAHLGLTPGDLLVAHPGGRHLLLTD  325 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLH--------s~gIVHRDLKPeNILL~~~~~~~VKLsD  325 (1310)
                      .+|+||||+++|+|.+.+.. ..+++..+..++.||+.||+|||        ++||+||||||+|||++.++  .+||+|
T Consensus        80 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~--~~kl~D  156 (301)
T 3q4u_A           80 QLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG--QCCIAD  156 (301)
T ss_dssp             EEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTS--CEEECC
T ss_pred             eeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCC--CEEEee
Confidence            68999999999999999854 46999999999999999999999        99999999999999998655  899999


Q ss_pred             eccceeecCCCC-----CCCcccchHHHh
Q psy5279         326 FGLSRRITSFGK-----LNPLEYDVRYVR  349 (1310)
Q Consensus       326 FGLAr~i~~~~~-----l~~~~~t~~yv~  349 (1310)
                      ||+|+.......     ..+.++|+.|++
T Consensus       157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~a  185 (301)
T 3q4u_A          157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMA  185 (301)
T ss_dssp             CTTCEEEETTTTEEECCCCCCCCCGGGCC
T ss_pred             CCCeeecccccccccccccccccccceeC
Confidence            999987755432     223355655543

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.93  E-value=3.2e-26  Score=268.39  Aligned_cols=166  Identities=25%  Similarity=0.335  Sum_probs=129.1

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .+.+.|.+.+.||+|+||+||.+ ...+|+.||||++...   ..+.+.+|+.+|+++ +|||||++++++.+.+.+|||
T Consensus        12 ~l~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv   87 (434)
T 2rio_A           12 SLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIA   87 (434)
T ss_dssp             SCSSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred             hhhheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEE
Confidence            56788888999999999999875 4678999999998643   234577899999986 899999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCC-------CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC-----------CCCe
Q psy5279         259 SELAGGGELLHSLTRQSYY-------TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP-----------GGRH  320 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~l-------sE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~-----------~~~~  320 (1310)
                      ||||. |+|.+.+......       ++.++..++.||+.||+|||++||+||||||+|||++.+           ++..
T Consensus        88 ~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~  166 (434)
T 2rio_A           88 LELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR  166 (434)
T ss_dssp             ECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred             EecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceE
Confidence            99996 5999988765432       233457799999999999999999999999999999753           2458


Q ss_pred             EEEEeeccceeecCCC-----CCCCcccchHHHhh
Q psy5279         321 LLLTDFGLSRRITSFG-----KLNPLEYDVRYVRQ  350 (1310)
Q Consensus       321 VKLsDFGLAr~i~~~~-----~l~~~~~t~~yv~~  350 (1310)
                      +||+|||+|+.+....     .....+||+.|+++
T Consensus       167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aP  201 (434)
T 2rio_A          167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAP  201 (434)
T ss_dssp             EEECCCTTCEECCC--------------CCTTSCH
T ss_pred             EEEcccccceecCCCCccceeeecCCCCCCCccCH
Confidence            9999999999875432     12234556555443

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.93  E-value=3.8e-26  Score=249.50  Aligned_cols=153  Identities=25%  Similarity=0.299  Sum_probs=126.0

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCC---CcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSS---GRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~T---g~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~l  255 (1310)
                      ...++|++.+.||+|+||.||+|.+..+   +..||+|++.... ....+.+.+|+.+|++++||||+++++++. .+.+
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~   90 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV   90 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence            3457899999999999999999998754   4579999886543 234567889999999999999999999984 5678


Q ss_pred             EEEEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         256 TIISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+||||+++|+|.+.+.... .+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+....
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~  168 (281)
T 1mp8_A           91 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND--CVKLGDFGLSRYMED  168 (281)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT--EEEECC---------
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCC--CEEECccccccccCc
Confidence            99999999999999987654 599999999999999999999999999999999999998765  899999999987754


Q ss_pred             C
Q psy5279         335 F  335 (1310)
Q Consensus       335 ~  335 (1310)
                      .
T Consensus       169 ~  169 (281)
T 1mp8_A          169 S  169 (281)
T ss_dssp             -
T ss_pred             c
Confidence            3

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.93  E-value=8.6e-26  Score=244.18  Aligned_cols=196  Identities=22%  Similarity=0.334  Sum_probs=143.3

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc----chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN----QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~----~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .++|++.+.||+|+||.||+|.+.  |+.||+|++.....    ...+.+.+|+.+++.++||||+++++++..++.+++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL   83 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence            468999999999999999999874  88999999865322    234668899999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC---eeecCCCCCCEEeecC------CCCeEEEEeecc
Q psy5279         258 ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS---IAHLGLTPGDLLVAHP------GGRHLLLTDFGL  328 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~g---IVHRDLKPeNILL~~~------~~~~VKLsDFGL  328 (1310)
                      ||||++||+|.+.+. ...+++..+..++.|++.||.|||++|   |+||||||+|||++.+      .+..+||+|||+
T Consensus        84 v~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~  162 (271)
T 3dtc_A           84 VMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL  162 (271)
T ss_dssp             EEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred             EEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence            999999999988875 457999999999999999999999999   9999999999999752      134799999999


Q ss_pred             ceeecCCCCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCC
Q psy5279         329 SRRITSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNS  403 (1310)
Q Consensus       329 Ar~i~~~~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~  403 (1310)
                      |+....... ....+|+.|.     +|+...+                 ..++...| | .|..+...++.+.|...
T Consensus       163 ~~~~~~~~~-~~~~~~~~y~-----aPE~~~~-----------------~~~~~~~Di~slG~~l~~l~~g~~p~~~  216 (271)
T 3dtc_A          163 AREWHRTTK-MSAAGAYAWM-----APEVIRA-----------------SMFSKGSDVWSYGVLLWELLTGEVPFRG  216 (271)
T ss_dssp             --------------CCGGGS-----CHHHHHH-----------------CCCSHHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred             ccccccccc-cCCCCcccee-----CHHHhcc-----------------CCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            987654322 2334454443     4443211                 11333456 4 56677777776666543

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.93  E-value=1.4e-25  Score=247.19  Aligned_cols=193  Identities=19%  Similarity=0.289  Sum_probs=151.9

Q ss_pred             CeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC----cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         184 AYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       184 ~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~----~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .|...+.||+|+||.||+|.+  +++.||+|++....    ....+.+.+|+.+|+.++||||+++++++...+.+++||
T Consensus        32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  109 (307)
T 2nru_A           32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVY  109 (307)
T ss_dssp             TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEE
Confidence            355668999999999999975  68899999986532    234567899999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhh---cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         260 ELAGGGELLHSLTR---QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~---~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      ||++||+|.+.+..   ...+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+......
T Consensus       110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~kl~Dfg~~~~~~~~~  187 (307)
T 2nru_A          110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF--TAKISDFGLARASEKFA  187 (307)
T ss_dssp             ECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC--CEEECCCTTCEECCSCS
T ss_pred             EecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCC--cEEEeeccccccccccc
Confidence            99999999988863   34599999999999999999999999999999999999997654  89999999998765432


Q ss_pred             C---CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCC
Q psy5279         337 K---LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNS  403 (1310)
Q Consensus       337 ~---l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~  403 (1310)
                      .   ....++|+.|+     +|++.                  ..-++...| | .|..+...++.+.|.+.
T Consensus       188 ~~~~~~~~~g~~~y~-----aPE~~------------------~~~~~~~~Dv~slG~il~~l~~g~~p~~~  236 (307)
T 2nru_A          188 QTVMTSRIVGTTAYM-----APEAL------------------RGEITPKSDIYSFGVVLLEIITGLPAVDE  236 (307)
T ss_dssp             SCEECSSCCSCGGGC-----CHHHH------------------TTEECTHHHHHHHHHHHHHHHHCCCSBCT
T ss_pred             ccccccccCCCcCcC-----ChHHh------------------cCCCCccchhHHHHHHHHHHHHCCCCccc
Confidence            1   22334555554     34432                  111333456 4 56677777776666544

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.93  E-value=4e-26  Score=248.92  Aligned_cols=152  Identities=26%  Similarity=0.335  Sum_probs=137.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ...++|++.+.||+|+||.||+|.++.+++.||+|++.... ...+.+.+|+.+|+.++||||+++++++.+++.+|+||
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   88 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   88 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence            34578999999999999999999999999999999997543 34567889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         260 ELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ||+.||+|.+.+...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+....
T Consensus        89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~--~~~l~Dfg~~~~~~~  163 (288)
T 3kfa_A           89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--LVKVADFGLSRLMTG  163 (288)
T ss_dssp             ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGG--CEEECCCCGGGTSCS
T ss_pred             EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCC--CEEEccCccceeccC
Confidence            999999999999763  3499999999999999999999999999999999999997655  799999999987654

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.93  E-value=8.5e-26  Score=250.50  Aligned_cols=149  Identities=23%  Similarity=0.408  Sum_probs=131.3

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcC--CCCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLC--HRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~--HPNIVkL~d~f~~~~~ly  256 (1310)
                      ..++|++.+.||+|+||.||+|.+. +|+.||||++....  ....+.+.+|+.+|+++.  ||||+++++++...+.+|
T Consensus        26 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~  104 (313)
T 3cek_A           26 KGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY  104 (313)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred             ccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence            3467999999999999999999875 58999999997543  234567889999999997  599999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +||| +.+++|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||+++   ..+||+|||+|+.+..
T Consensus       105 lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~---~~~kL~Dfg~~~~~~~  178 (313)
T 3cek_A          105 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQP  178 (313)
T ss_dssp             EEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET---TEEEECCCSSSCC---
T ss_pred             EEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC---CeEEEeeccccccccC
Confidence            9999 678899999988888999999999999999999999999999999999999963   3799999999987654

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.93  E-value=5.9e-26  Score=270.78  Aligned_cols=150  Identities=26%  Similarity=0.351  Sum_probs=136.5

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .+.|++.+.||+|+||.||+|.++.++..||||++.... ...+.+.+|+.+|++|+|||||+++++|...+.+||||||
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~  297 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF  297 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence            467999999999999999999999999999999997543 3456789999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         262 AGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       262 ~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+||+|.+.+...  ..+++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus       298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~--~~kl~DFG~a~~~~~  370 (495)
T 1opk_A          298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENH--LVKVADFGLSRLMTG  370 (495)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG--CEEECCTTCEECCTT
T ss_pred             cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCC--cEEEeecccceeccC
Confidence            9999999999753  3489999999999999999999999999999999999998654  899999999997654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.93  E-value=1.9e-25  Score=243.56  Aligned_cols=151  Identities=19%  Similarity=0.311  Sum_probs=125.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEE-EEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHD-SYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d-~f~~~~~lyLV  258 (1310)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||||++.....  ...+.+|+.+++.++|+|++..+. ++...+..++|
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   83 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence            456889999999999999999999999999999998765432  234778999999999888766554 55778889999


Q ss_pred             EecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEe---ecCCCCeEEEEeeccceeecC
Q psy5279         259 SELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLV---AHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL---~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||+ +|+|.+.+.. ...+++.++..++.||+.||.|||++||+||||||+|||+   +.+  ..+||+|||+|+....
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~--~~~kL~Dfg~a~~~~~  160 (296)
T 4hgt_A           84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKG--NLVYIIDFGLAKKYRD  160 (296)
T ss_dssp             EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGT--TCEEECCCTTCEECBC
T ss_pred             EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCC--CeEEEecCccceeccC
Confidence            9999 8999998874 3469999999999999999999999999999999999999   443  4799999999998765


Q ss_pred             C
Q psy5279         335 F  335 (1310)
Q Consensus       335 ~  335 (1310)
                      .
T Consensus       161 ~  161 (296)
T 4hgt_A          161 A  161 (296)
T ss_dssp             T
T ss_pred             c
Confidence            4

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.93  E-value=2.5e-25  Score=243.21  Aligned_cols=153  Identities=19%  Similarity=0.307  Sum_probs=130.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEE-EEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLH-DSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~-d~f~~~~~lyLV  258 (1310)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||||++.....  ...+.+|+.+++.++|++++..+ .++...+..++|
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   83 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence            356889999999999999999999999999999999875432  23578999999999998866554 445777889999


Q ss_pred             EecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeec-CCCCeEEEEeeccceeecCC
Q psy5279         259 SELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH-PGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~-~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |||+ +|+|.+.+.. ...+++.++..++.||+.||.|||++||+||||||+|||++. +.+..+||+|||+|+.....
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~  161 (296)
T 3uzp_A           84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  161 (296)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred             EEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence            9999 8999998873 446999999999999999999999999999999999999951 11247999999999987654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.93  E-value=5.2e-26  Score=249.83  Aligned_cols=199  Identities=21%  Similarity=0.365  Sum_probs=143.2

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ...++|++.+.||+|+||.||+|.+.   ..||+|++.....  ...+.+.+|+.+|++++||||+++++++ ..+.+++
T Consensus        21 i~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l   96 (289)
T 3og7_A           21 IPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI   96 (289)
T ss_dssp             CCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred             cCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence            45678999999999999999999754   3599999975432  3456788999999999999999999954 5667899


Q ss_pred             EEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         258 ISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      ||||+.|++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+......
T Consensus        97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~  174 (289)
T 3og7_A           97 VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDN--TVKIGDFGLATEKSRWS  174 (289)
T ss_dssp             EEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTT--EEEECCCC---------
T ss_pred             EEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCC--CEEEccceecccccccc
Confidence            99999999999998644 4599999999999999999999999999999999999998765  89999999998664321


Q ss_pred             ---CCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCC
Q psy5279         337 ---KLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNS  403 (1310)
Q Consensus       337 ---~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~  403 (1310)
                         .....++|+.|     .+|++.....              ...++...| | .|..+...++.+.|+..
T Consensus       175 ~~~~~~~~~gt~~y-----~aPE~~~~~~--------------~~~~~~~~Di~slG~il~el~~g~~p~~~  227 (289)
T 3og7_A          175 GSHQFEQLSGSILW-----MAPEVIRMQD--------------SNPYSFQSDVYAFGIVLYELMTGQLPYSN  227 (289)
T ss_dssp             ---------CCCTT-----CCHHHHC------------------CCSCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             ccccccccCCCccc-----cCchhhcccC--------------CCCCCcccchHHHHHHHHHHHHCCCCccc
Confidence               22233444333     3455432110              011333456 4 67777777777766544

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.93  E-value=1.1e-25  Score=251.45  Aligned_cols=153  Identities=27%  Similarity=0.424  Sum_probs=135.9

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCc-----EEEEEEEecCCc-chHHHHHHHHHHHHhc-CCCCcceEEEEEEeCC
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGR-----NYAAKVMTGKGN-QYKSLFKNELDIMNQL-CHRNLVRLHDSYETKD  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~-----~vAIKiI~~~~~-~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~  253 (1310)
                      ..+.|++.+.||+|+||.||+|.+..+++     .||+|++..... ...+.+.+|+.+|+.| +||||+++++++...+
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  123 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG  123 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence            45789999999999999999999987765     799999975432 3456788999999999 8999999999999999


Q ss_pred             eEEEEEecCCCCchHHHhhhc--------------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCC
Q psy5279         254 SFTIISELAGGGELLHSLTRQ--------------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR  319 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~--------------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~  319 (1310)
                      .+|+||||+++|+|.+.+...              ..+++.++..++.||+.||.|||++||+||||||+|||++.++  
T Consensus       124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~--  201 (333)
T 2i1m_A          124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH--  201 (333)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGG--
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCC--
Confidence            999999999999999988642              3579999999999999999999999999999999999998655  


Q ss_pred             eEEEEeeccceeecCC
Q psy5279         320 HLLLTDFGLSRRITSF  335 (1310)
Q Consensus       320 ~VKLsDFGLAr~i~~~  335 (1310)
                      .+||+|||+|+.+...
T Consensus       202 ~~kl~Dfg~~~~~~~~  217 (333)
T 2i1m_A          202 VAKIGDFGLARDIMND  217 (333)
T ss_dssp             EEEBCCCGGGCCGGGC
T ss_pred             eEEECccccccccccc
Confidence            8999999999876543

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=2.5e-27  Score=273.03  Aligned_cols=150  Identities=16%  Similarity=0.206  Sum_probs=108.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc---cccCCCCCCcccccccccCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---IHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~---~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||+++........   ......+++.|+|||++.+..
T Consensus       195 ~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~--~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  272 (373)
T 3c1x_A          195 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK  272 (373)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT--TCCEEECCC---------------------CCGGGSCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHCCEecCccchheEEECC--CCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCC
Confidence            345679999999999999999999999999975  457999999999755322111   112234567899999999999


Q ss_pred             CCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++.++|||||||++|+|++ |.+||.+.+..+....+.....  ......++++..+++.+|+. ++.+|+++.+++++
T Consensus       273 ~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~--~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          273 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR--LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999 7889988776665554433321  11234678899999999887 55678888887643

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.93  E-value=9.9e-26  Score=253.64  Aligned_cols=152  Identities=22%  Similarity=0.326  Sum_probs=128.1

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEE----EEEEEecC-CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNY----AAKVMTGK-GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~v----AIKiI~~~-~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~l  255 (1310)
                      ..++|++.+.||+|+||.||+|.+..+++.+    |+|.+... .......+.+|+.+|+.++||||++++++|.... .
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~   91 (327)
T 3lzb_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V   91 (327)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred             CHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence            3578999999999999999999999998866    55555432 2345677889999999999999999999998765 8


Q ss_pred             EEEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         256 TIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++|+||+.+|+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus        92 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~--~~kL~DfG~a~~~~~  169 (327)
T 3lzb_A           92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGA  169 (327)
T ss_dssp             EEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT--EEEECCTTC------
T ss_pred             eEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCC--CEEEccCcceeEccC
Confidence            8999999999999998764 4699999999999999999999999999999999999998765  899999999987754


Q ss_pred             C
Q psy5279         335 F  335 (1310)
Q Consensus       335 ~  335 (1310)
                      .
T Consensus       170 ~  170 (327)
T 3lzb_A          170 E  170 (327)
T ss_dssp             -
T ss_pred             c
Confidence            3

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.93  E-value=2.8e-26  Score=259.56  Aligned_cols=147  Identities=16%  Similarity=0.230  Sum_probs=129.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCC--------CcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcce---------
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSS--------GRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVR---------  244 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~T--------g~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVk---------  244 (1310)
                      .++|++.+.||+|+||.||+|.+..|        ++.||+|++...     ..+.+|+.+|++++|||||+         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            47899999999999999999999884        889999998754     35778999999999999998         


Q ss_pred             ------EEEEEEe-CCeEEEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeec
Q psy5279         245 ------LHDSYET-KDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH  315 (1310)
Q Consensus       245 ------L~d~f~~-~~~lyLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~  315 (1310)
                            +++++.. .+.+||||||+ ||+|.+.+...  ..+++.++..++.||+.||.|||++||+||||||+|||++.
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~  194 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDP  194 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEET
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcC
Confidence                  6777776 78899999999 99999999875  67999999999999999999999999999999999999986


Q ss_pred             CCCCeEEEEeeccceeecC
Q psy5279         316 PGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       316 ~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++...+||+|||+|+.+..
T Consensus       195 ~~~~~~kl~Dfg~a~~~~~  213 (352)
T 2jii_A          195 EDQSQVTLAGYGFAFRYCP  213 (352)
T ss_dssp             TEEEEEEECCGGGCBCSSG
T ss_pred             CCCceEEEecCcceeeccC
Confidence            5434799999999987754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.93  E-value=3.7e-27  Score=277.49  Aligned_cols=144  Identities=19%  Similarity=0.287  Sum_probs=114.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||+++.....    .....+++.|+|||++.+..++.
T Consensus       292 ~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~--~~~~kl~DfG~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~  365 (450)
T 1k9a_A          292 LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE--DNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALREKKFST  365 (450)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT--TSCEEECCCTTCEECC----------CCCTTTSCHHHHHSSCCCH
T ss_pred             HHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECC--CCCEEEeeCCCccccccc----ccCCCCCcceeCHHHhcCCCCCc
Confidence            345679999999999999999999999999975  457999999999754321    12234568999999999999999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      ++|||||||++|+|++ |..||.+.+..+....+... ++. .....++++..+++..|+. ++.+|+++.+++
T Consensus       366 ~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-~~~-~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~  437 (450)
T 1k9a_A          366 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YKM-DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLR  437 (450)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTT-CCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCC-CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            9999999999999998 99999988777766655432 122 1235688999999999886 556788887765

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.93  E-value=9.6e-26  Score=265.52  Aligned_cols=148  Identities=26%  Similarity=0.386  Sum_probs=131.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ..+.|++.+.||+|+||.||+|.+. ++..||||++.... ...+.+.+|+.+|++|+|||||++++++. .+.+|||||
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e  262 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE  262 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred             chHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence            4578999999999999999999875 46789999997543 34677899999999999999999999986 667999999


Q ss_pred             cCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         261 LAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       261 y~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ||++|+|.+.+...  ..+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+.
T Consensus       263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~--~~kl~DFG~a~~~~  335 (454)
T 1qcf_A          263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL--VCKIADFGLARVIE  335 (454)
T ss_dssp             CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTC--CEEECSTTGGGGBC
T ss_pred             ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCC--cEEEeeCCCceEcC
Confidence            99999999998753  2588999999999999999999999999999999999998654  89999999998764

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.93  E-value=1.8e-25  Score=250.86  Aligned_cols=153  Identities=25%  Similarity=0.386  Sum_probs=133.7

Q ss_pred             cCCCeeeeceecccCceEEEEEEEc-------CCCcEEEEEEEecCCc-chHHHHHHHHHHHHhc-CCCCcceEEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVER-------SSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQL-CHRNLVRLHDSYET  251 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k-------~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~  251 (1310)
                      ..++|++.+.||+|+||.||+|.+.       .+++.||+|++..... .....+.+|+.+|+.+ +||||+++++++..
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            3478999999999999999999986       4678999999975432 3455688999999999 89999999999999


Q ss_pred             CCeEEEEEecCCCCchHHHhhhcC----------------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeec
Q psy5279         252 KDSFTIISELAGGGELLHSLTRQS----------------YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH  315 (1310)
Q Consensus       252 ~~~lyLVmEy~~GGeL~~~l~~~~----------------~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~  315 (1310)
                      .+.+|+||||++||+|.+.+....                .+++.++..++.||+.||.|||++||+||||||+|||++.
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  192 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE  192 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred             CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcC
Confidence            999999999999999999987543                3899999999999999999999999999999999999986


Q ss_pred             CCCCeEEEEeeccceeecCC
Q psy5279         316 PGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       316 ~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ++  .+||+|||+|+.....
T Consensus       193 ~~--~~kL~Dfg~~~~~~~~  210 (334)
T 2pvf_A          193 NN--VMKIADFGLARDINNI  210 (334)
T ss_dssp             TC--CEEECCCTTCEECTTT
T ss_pred             CC--CEEEcccccccccccc
Confidence            55  7999999999977543

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=8.8e-26  Score=246.96  Aligned_cols=150  Identities=21%  Similarity=0.304  Sum_probs=131.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCc---EEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeE-EE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGR---NYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSF-TI  257 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~---~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~l-yL  257 (1310)
                      -.|.+.+.||+|+||.||+|.+..+++   .||+|++..... ...+.+.+|+.+|+.++|||||++++++.+.+.. ++
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  100 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV  100 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence            357788999999999999999876655   799999975433 3456788999999999999999999999877665 99


Q ss_pred             EEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         258 ISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ||||+.+|+|.+.+... ..+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus       101 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~--~~kl~Dfg~~~~~~~  176 (298)
T 3pls_A          101 LLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESF--TVKVADFGLARDILD  176 (298)
T ss_dssp             EECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC--CEEECCTTSSCTTTT
T ss_pred             EEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC--cEEeCcCCCcccccC
Confidence            99999999999998763 4589999999999999999999999999999999999998655  799999999986643

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.93  E-value=3.8e-27  Score=256.62  Aligned_cols=145  Identities=17%  Similarity=0.249  Sum_probs=110.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++.......    ....+++.|+|||++.+..++.
T Consensus       120 ~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~Dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~  193 (278)
T 1byg_A          120 LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE--DNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAPEALREKKFST  193 (278)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT--TSCEEECCCCC----------------CCTTTSCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHHHHhCCccccCCCcceEEEeC--CCcEEEeeccccccccccc----cCCCccccccCHHHhCCCCCCc
Confidence            345679999999999999999999999999975  4579999999987543221    2234578999999999889999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++|||||||++|+|++ |..||.+.+..+....+.... . ......++++..+++..|+. ++.+|+++.+.++
T Consensus       194 ~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          194 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-K-MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTC-C-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-C-CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            9999999999999998 999999887777665554321 1 12335678999999999886 5667888877653

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=3.3e-27  Score=262.66  Aligned_cols=151  Identities=17%  Similarity=0.220  Sum_probs=108.8

Q ss_pred             HHHHHHHHHHHHHHHC--------CceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc---cccCCCCCCccccc
Q psy5279         950 YCVTSVLDGLQYLHWR--------GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---IHPINTPNPEFAAP 1018 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~--------gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~---~~~~~tGtp~Y~AP 1018 (1310)
                      .++.||+.||.|||++        ||+||||||+|||++.  +..+||+|||+++........   ......||+.|+||
T Consensus       138 ~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP  215 (337)
T 3mdy_A          138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK--NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP  215 (337)
T ss_dssp             HHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECT--TSCEEECCCTTCEECC---------CCSSCSCGGGCCH
T ss_pred             HHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECC--CCCEEEEeCCCceeeccccccccCCCCCCccCcceeCh
Confidence            4567999999999999        9999999999999975  457999999999765432221   11234578999999


Q ss_pred             ccccCCCCCCc------cchhHHHHHHHHHhcC----------CCCCCCCCh-----hHHHhhhccc--ccccccc--ch
Q psy5279        1019 EVLAEEPIFPQ------TDVWSAGVLAYVLLSG----------ASPFRGQSE-----PETRQNVNFV--RYRFEYL--FK 1073 (1310)
Q Consensus      1019 Evl~~~~ys~k------sDIWSLGViLyeLLtG----------~~PF~g~~~-----~e~~~~I~~~--~~~f~~~--~~ 1073 (1310)
                      |++.+..+...      +|||||||++|+|++|          ..||.....     ......+...  ...++..  ..
T Consensus       216 E~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (337)
T 3mdy_A          216 EVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSD  295 (337)
T ss_dssp             HHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGS
T ss_pred             hhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhh
Confidence            99988877665      9999999999999999          777765321     1222222111  1222221  23


Q ss_pred             hccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1074 ELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1074 ~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      .++++..+++.+|+. +|.+|+++.++++|
T Consensus       296 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          296 ECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             HHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            567889999999887 56679999887754

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.93  E-value=9.1e-26  Score=249.84  Aligned_cols=153  Identities=21%  Similarity=0.269  Sum_probs=124.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcC---CCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe-
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERS---SGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS-  254 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~---Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~-  254 (1310)
                      ..++|.+.+.||+|+||.||+|....   +++.||+|++....  ....+.+.+|+.+|++++||||+++++++...+. 
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  111 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ  111 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence            34689999999999999999998765   56689999987543  2334568899999999999999999999987653 


Q ss_pred             ----EEEEEecCCCCchHHHhh------hcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEE
Q psy5279         255 ----FTIISELAGGGELLHSLT------RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT  324 (1310)
Q Consensus       255 ----lyLVmEy~~GGeL~~~l~------~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLs  324 (1310)
                          .|+||||+++|+|.+.+.      ....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+
T Consensus       112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~--~~kl~  189 (313)
T 3brb_A          112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDM--TVCVA  189 (313)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTS--CEEEC
T ss_pred             CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC--cEEEe
Confidence                599999999999999883      234699999999999999999999999999999999999998654  79999


Q ss_pred             eeccceeecCC
Q psy5279         325 DFGLSRRITSF  335 (1310)
Q Consensus       325 DFGLAr~i~~~  335 (1310)
                      |||+|+.+...
T Consensus       190 Dfg~~~~~~~~  200 (313)
T 3brb_A          190 DFGLSKKIYSG  200 (313)
T ss_dssp             SCSCC------
T ss_pred             ecCcceecccc
Confidence            99999877543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.93  E-value=4.7e-26  Score=267.70  Aligned_cols=162  Identities=20%  Similarity=0.292  Sum_probs=128.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      ..|.+.+.||+|+||+|+. ....+|+.||||++......   .+.+|+.+|+.+ +|||||++++++.+.+.+||||||
T Consensus        24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            4689999999999999763 44678999999999654322   246899999999 799999999999999999999999


Q ss_pred             CCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeec---CCCCeEEEEeeccceeecCCC-
Q psy5279         262 AGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH---PGGRHLLLTDFGLSRRITSFG-  336 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~---~~~~~VKLsDFGLAr~i~~~~-  336 (1310)
                      |. |+|.+.+.... .+++.++..++.||+.||.|||++||+||||||+|||++.   ++...+||+|||+|+.+.... 
T Consensus       100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~  178 (432)
T 3p23_A          100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH  178 (432)
T ss_dssp             CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred             CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence            97 58988887554 3666678899999999999999999999999999999953   333468999999999775431 


Q ss_pred             ---CCCCcccchHHHh
Q psy5279         337 ---KLNPLEYDVRYVR  349 (1310)
Q Consensus       337 ---~l~~~~~t~~yv~  349 (1310)
                         .....+||+.|++
T Consensus       179 ~~~~~~~~~gt~~y~A  194 (432)
T 3p23_A          179 SFSRRSGVPGTEGWIA  194 (432)
T ss_dssp             -------CCSCTTSCC
T ss_pred             ceeeccccCCCcCccC
Confidence               2233455555544

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.93  E-value=8.1e-26  Score=243.03  Aligned_cols=196  Identities=14%  Similarity=0.202  Sum_probs=153.1

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeC--CeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETK--DSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~--~~ly  256 (1310)
                      ..++|++.+.||+|+||.||+|.+.  |+.||+|++....  ....+.+.+|+.+|++++||||+++++++.+.  +.++
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   85 (271)
T 3kmu_A            8 DFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT   85 (271)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred             CHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence            3467999999999999999999974  8899999997653  23455688999999999999999999999987  7899


Q ss_pred             EEEecCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCC--eeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         257 IISELAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLS--IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~g--IVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      +||||++||+|.+.+....  .+++.++..++.||+.||.|||++|  |+||||||+|||++.++  .+||+|||++...
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~--~~~l~~~~~~~~~  163 (271)
T 3kmu_A           86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDM--TARISMADVKFSF  163 (271)
T ss_dssp             EEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTS--CEEEEGGGSCCTT
T ss_pred             eeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCc--ceeEEeccceeee
Confidence            9999999999999997655  4899999999999999999999999  99999999999998655  6888888887653


Q ss_pred             cCCCCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCC
Q psy5279         333 TSFGKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNS  403 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~  403 (1310)
                      ...    ...+|+.|     .+|++..+...              ..++...| | .|..+...++.+.|..+
T Consensus       164 ~~~----~~~~t~~y-----~aPE~~~~~~~--------------~~~~~~~Di~slG~il~el~~g~~p~~~  213 (271)
T 3kmu_A          164 QSP----GRMYAPAW-----VAPEALQKKPE--------------DTNRRSADMWSFAVLLWELVTREVPFAD  213 (271)
T ss_dssp             SCT----TCBSCGGG-----SCHHHHHSCGG--------------GSCHHHHHHHHHHHHHHHHHHCSCTTTT
T ss_pred             ccc----CccCCccc-----cChhhhccCCC--------------CCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            322    23445444     44554322110              11122356 4 67777777777666543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=1.5e-25  Score=252.55  Aligned_cols=153  Identities=24%  Similarity=0.365  Sum_probs=130.2

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCC----cEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSG----RNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg----~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~  254 (1310)
                      .....|.+.+.||+|+||.||+|.++.++    ..||+|++.... ......+.+|+.+|+.++||||+++++++...+.
T Consensus        41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  120 (333)
T 1mqb_A           41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP  120 (333)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence            34578999999999999999999987654    359999997543 2345568899999999999999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         255 FTIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ++|||||++||+|.+.+... ..+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus       121 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~--~~kl~Dfg~~~~~~  198 (333)
T 1mqb_A          121 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL--VCKVSDFGLSRVLE  198 (333)
T ss_dssp             EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC--CEEECCCCC-----
T ss_pred             cEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCC--cEEECCCCcchhhc
Confidence            99999999999999998764 4699999999999999999999999999999999999998654  89999999998775


Q ss_pred             C
Q psy5279         334 S  334 (1310)
Q Consensus       334 ~  334 (1310)
                      .
T Consensus       199 ~  199 (333)
T 1mqb_A          199 D  199 (333)
T ss_dssp             -
T ss_pred             c
Confidence            4

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.93  E-value=1.8e-25  Score=263.09  Aligned_cols=147  Identities=22%  Similarity=0.341  Sum_probs=131.3

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC-eEEEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD-SFTIIS  259 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~-~lyLVm  259 (1310)
                      -.+.|++.+.||+|+||.||+|...  |+.||||+++...  ..+.+.+|+.+|++|+|||||++++++...+ .+||||
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~  266 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT  266 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence            3467999999999999999999875  7899999997543  4567889999999999999999999987765 799999


Q ss_pred             ecCCCCchHHHhhhcCC--CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         260 ELAGGGELLHSLTRQSY--YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~--lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      |||++|+|.+.+...+.  +++..+..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+...
T Consensus       267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~--~~kl~DfG~a~~~~  340 (450)
T 1k9a_A          267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN--VAKVSDFGLTKEAS  340 (450)
T ss_dssp             ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTS--CEEECCCTTCEECC
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCC--CEEEeeCCCccccc
Confidence            99999999999976543  79999999999999999999999999999999999998655  89999999998653

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.93  E-value=8.2e-27  Score=287.01  Aligned_cols=148  Identities=20%  Similarity=0.251  Sum_probs=115.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||+|||++|||||||||+|||++.  +..+||+|||+++.......  .....+.+++.|+|||++.+..+
T Consensus       472 ~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~--~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~  549 (635)
T 4fl3_A          472 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF  549 (635)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE--TTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeC--CCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCC
Confidence            345679999999999999999999999999986  45799999999976543221  11223345688999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +.++|||||||++|+|++ |..||.+.+..+....+.....  ......+++++.+|+..|+. ++.+|+++.+++
T Consensus       550 ~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~  623 (635)
T 4fl3_A          550 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER--MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE  623 (635)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence            999999999999999998 9999999988887776654321  12235688999999999887 567798888765

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.93  E-value=2.9e-25  Score=248.35  Aligned_cols=153  Identities=22%  Similarity=0.360  Sum_probs=136.0

Q ss_pred             cCCCeeeeceecccCceEEEEEE----EcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC--e
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAV----ERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD--S  254 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~----~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~--~  254 (1310)
                      ..++|++.+.||+|+||.||+|.    +..+|+.||+|++........+.+.+|+.+|+.++||||+++++++...+  .
T Consensus        39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  118 (326)
T 2w1i_A           39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN  118 (326)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred             CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence            34679999999999999999998    46789999999998765556677899999999999999999999987654  7


Q ss_pred             EEEEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         255 FTIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      +++||||++||+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+...
T Consensus       119 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~--~~kL~Dfg~~~~~~  196 (326)
T 2w1i_A          119 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN--RVKIGDFGLTKVLP  196 (326)
T ss_dssp             CEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT--EEEECCCTTCEECC
T ss_pred             eEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCC--cEEEecCcchhhcc
Confidence            89999999999999999765 3599999999999999999999999999999999999998765  89999999999875


Q ss_pred             CC
Q psy5279         334 SF  335 (1310)
Q Consensus       334 ~~  335 (1310)
                      ..
T Consensus       197 ~~  198 (326)
T 2w1i_A          197 QD  198 (326)
T ss_dssp             SS
T ss_pred             cc
Confidence            43

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.93  E-value=7.8e-26  Score=248.25  Aligned_cols=153  Identities=22%  Similarity=0.313  Sum_probs=130.3

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCC---cEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEE-EeCCe
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSG---RNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSY-ETKDS  254 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg---~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f-~~~~~  254 (1310)
                      +....|++.+.||+|+||.||+|.+..++   ..+|+|.+..... ...+.+.+|+.+|++++||||+++++++ ..++.
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  101 (298)
T 3f66_A           22 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS  101 (298)
T ss_dssp             GGGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred             ccceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence            34467999999999999999999976543   3589999875433 3456688999999999999999999985 55678


Q ss_pred             EEEEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         255 FTIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .++||||++||+|.+.+... ..+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+.
T Consensus       102 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~a~~~~  179 (298)
T 3f66_A          102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMY  179 (298)
T ss_dssp             CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC--CEEECSCGGGCCCS
T ss_pred             eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCC--CEEECccccccccc
Confidence            89999999999999999754 4589999999999999999999999999999999999997654  89999999998765


Q ss_pred             C
Q psy5279         334 S  334 (1310)
Q Consensus       334 ~  334 (1310)
                      .
T Consensus       180 ~  180 (298)
T 3f66_A          180 D  180 (298)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.93  E-value=3.5e-27  Score=284.11  Aligned_cols=149  Identities=17%  Similarity=0.266  Sum_probs=117.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++|||||||||+|||++.  +..+||+|||+++..............+++.|+|||++.+..++.
T Consensus       366 ~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~--~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  443 (535)
T 2h8h_A          366 VDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI  443 (535)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG--GGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcC--CCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCc
Confidence            345679999999999999999999999999975  456999999999765322111122234567899999999889999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++|||||||++|+|++ |..||.+....+....+... ++.+ ....+++++.+||.+|+. ++.+|+++.+++.
T Consensus       444 ~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~-~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          444 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP-CPPECPESLHDLMCQCWRKEPEERPTFEYLQA  516 (535)
T ss_dssp             HHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTT-CCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCC-CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            9999999999999999 99999998887777666432 2222 234678899999999887 5567888877653

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.93  E-value=6.2e-28  Score=267.22  Aligned_cols=151  Identities=18%  Similarity=0.282  Sum_probs=108.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--------cccCCCCCCcccccc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--------IHPINTPNPEFAAPE 1019 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--------~~~~~tGtp~Y~APE 1019 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  +..+||+|||++.........        ......|++.|+|||
T Consensus       136 ~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  213 (317)
T 2buj_A          136 ILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGD--EGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE  213 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--TSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGG
T ss_pred             HHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC--CCCEEEEecCcchhcccccccccccccccccccccCCcccCCHh
Confidence            3456789999999999999999999999999975  456999999987654211000        001123578999999


Q ss_pred             cccCCC---CCCccchhHHHHHHHHHhcCCCCCCCCCh--hHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcch
Q psy5279        1020 VLAEEP---IFPQTDVWSAGVLAYVLLSGASPFRGQSE--PETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDW 1093 (1310)
Q Consensus      1020 vl~~~~---ys~ksDIWSLGViLyeLLtG~~PF~g~~~--~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~r 1093 (1310)
                      ++.+..   ++.++|||||||++|+|++|..||.....  ......+.. ...++ ....+++++.++|.+|+. ++.+|
T Consensus       214 ~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~li~~~l~~dp~~R  291 (317)
T 2buj_A          214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN-QLSIP-QSPRHSSALWQLLNSMMTVDPHQR  291 (317)
T ss_dssp             GSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC-C--CC-CCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             HhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc-cCCCC-ccccCCHHHHHHHHHHhhcChhhC
Confidence            998654   68899999999999999999999954211  111111111 12222 234678999999999887 55679


Q ss_pred             hcHHhhhCC
Q psy5279        1094 ITLANNIDH 1102 (1310)
Q Consensus      1094 it~~e~L~H 1102 (1310)
                      +++.+++.+
T Consensus       292 ps~~~ll~~  300 (317)
T 2buj_A          292 PHIPLLLSQ  300 (317)
T ss_dssp             CCHHHHHHH
T ss_pred             CCHHHHHHH
Confidence            998887754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.93  E-value=3.1e-25  Score=243.48  Aligned_cols=151  Identities=23%  Similarity=0.356  Sum_probs=133.1

Q ss_pred             CCCeeeec-eecccCceEEEEEEE--cCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         182 TDAYDFGD-ELGRGVTGIVYHAVE--RSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       182 ~d~Y~i~~-~LG~GsFG~Vyka~~--k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      .++|.+.+ .||+|+||.||+|.+  ..+++.||||++....  ....+.+.+|+.+|+.++||||+++++++ ..+.+|
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~   93 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM   93 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence            35788888 999999999999954  5678999999997543  23356788999999999999999999999 567889


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      +||||++||+|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.....
T Consensus        94 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~~  170 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH--YAKISDFGLSKALRAD  170 (291)
T ss_dssp             EEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT--EEEECCCTTCEECCTT
T ss_pred             EEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCC--cEEEccCCcceeeccC
Confidence            9999999999999998877899999999999999999999999999999999999998765  8999999999887543

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.93  E-value=1e-25  Score=248.44  Aligned_cols=152  Identities=24%  Similarity=0.368  Sum_probs=133.2

Q ss_pred             cCCCeeeeceecccCceEEEEEEE-----cCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhc-CCCCcceEEEEEEeCC
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVE-----RSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQL-CHRNLVRLHDSYETKD  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~-----k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~  253 (1310)
                      ..++|++.+.||+|+||.||+|.+     ..+++.||||++..... .....+.+|+.+|+++ +||||+++++++...+
T Consensus        25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  104 (316)
T 2xir_A           25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG  104 (316)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence            457899999999999999999985     45778999999975433 3445688999999999 7999999999998765


Q ss_pred             -eEEEEEecCCCCchHHHhhhcCC----------------CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC
Q psy5279         254 -SFTIISELAGGGELLHSLTRQSY----------------YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP  316 (1310)
Q Consensus       254 -~lyLVmEy~~GGeL~~~l~~~~~----------------lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~  316 (1310)
                       .+|+||||++||+|.+.+.....                +++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~  184 (316)
T 2xir_A          105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK  184 (316)
T ss_dssp             SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCC
Confidence             59999999999999999976543                8899999999999999999999999999999999999865


Q ss_pred             CCCeEEEEeeccceeecC
Q psy5279         317 GGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       317 ~~~~VKLsDFGLAr~i~~  334 (1310)
                      +  .+||+|||+|+.+..
T Consensus       185 ~--~~kl~Dfg~~~~~~~  200 (316)
T 2xir_A          185 N--VVKICDFGLARDIYK  200 (316)
T ss_dssp             G--CEEECCCGGGSCTTT
T ss_pred             C--CEEECCCcccccccc
Confidence            5  799999999987644

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.93  E-value=2.8e-26  Score=283.43  Aligned_cols=167  Identities=20%  Similarity=0.307  Sum_probs=138.6

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC-CcchHHHHHHHHHHHHhcCCCCcceEEEEEEe------CC
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK-GNQYKSLFKNELDIMNQLCHRNLVRLHDSYET------KD  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~-~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~------~~  253 (1310)
                      ..++|++.+.||+|+||.||+|.++.+|+.||||++... .....+.+.+|+.+|+.++|||||++++++..      .+
T Consensus        12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred             CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence            347899999999999999999999999999999998754 23445678899999999999999999999866      77


Q ss_pred             eEEEEEecCCCCchHHHhhhcC---CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC-CeEEEEeeccc
Q psy5279         254 SFTIISELAGGGELLHSLTRQS---YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG-RHLLLTDFGLS  329 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~---~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~-~~VKLsDFGLA  329 (1310)
                      ..|+|||||+||+|.+.+....   .+++..+..++.||+.||.|||++||+||||||+|||++.++. ..+||+|||+|
T Consensus        92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a  171 (676)
T 3qa8_A           92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA  171 (676)
T ss_dssp             SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred             eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccc
Confidence            8899999999999999987643   5899999999999999999999999999999999999986542 35899999999


Q ss_pred             eeecCCCCCCCcccchHH
Q psy5279         330 RRITSFGKLNPLEYDVRY  347 (1310)
Q Consensus       330 r~i~~~~~l~~~~~t~~y  347 (1310)
                      +...........++|+.|
T Consensus       172 ~~~~~~~~~~~~~gt~~Y  189 (676)
T 3qa8_A          172 KELDQGELCTEFVGTLQY  189 (676)
T ss_dssp             CBTTSCCCCCCCCSCCTT
T ss_pred             cccccccccccccCCccc
Confidence            987654443334444333

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.93  E-value=8.6e-26  Score=259.72  Aligned_cols=151  Identities=22%  Similarity=0.339  Sum_probs=128.5

Q ss_pred             CCCeeeeceecccCceEEEEEEEc---CCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVER---SSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k---~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .+.|++.+.||+|+||.||+|.++   .++..||||++.... ....+.+.+|+.+|++++|||||++++++...+.+||
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            467899999999999999999887   567789999997542 3445678999999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         258 ISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |||||+||+|.+.+...+ .+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~  199 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL--VCKVSDFGLGRVLED  199 (373)
T ss_dssp             EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC--CEEECCC--------
T ss_pred             EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCC--CEEECcCcccccccc
Confidence            999999999999997654 599999999999999999999999999999999999998654  899999999987754

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.92  E-value=3.4e-25  Score=247.34  Aligned_cols=153  Identities=23%  Similarity=0.373  Sum_probs=133.1

Q ss_pred             ccCCCe-eeeceecccCceEEEEEE----EcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeC-
Q psy5279         180 PITDAY-DFGDELGRGVTGIVYHAV----ERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETK-  252 (1310)
Q Consensus       180 ~~~d~Y-~i~~~LG~GsFG~Vyka~----~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-  252 (1310)
                      .+.++| ++.+.||+|+||.||+|.    +..+|+.||||++..... .....+.+|+.+|+.++||||+++++++.+. 
T Consensus        27 ~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  106 (318)
T 3lxp_A           27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG  106 (318)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             eecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC
Confidence            355666 999999999999998775    446889999999976532 4456789999999999999999999999884 


Q ss_pred             -CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         253 -DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       253 -~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                       ..+++||||+++|+|.+.+... .+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~--~~kl~Dfg~a~~  183 (318)
T 3lxp_A          107 AASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDR--LVKIGDFGLAKA  183 (318)
T ss_dssp             TTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC--CEEECCGGGCEE
T ss_pred             CceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCC--CEEECCcccccc
Confidence             6899999999999999998764 499999999999999999999999999999999999998654  799999999998


Q ss_pred             ecCC
Q psy5279         332 ITSF  335 (1310)
Q Consensus       332 i~~~  335 (1310)
                      ....
T Consensus       184 ~~~~  187 (318)
T 3lxp_A          184 VPEG  187 (318)
T ss_dssp             CCTT
T ss_pred             cccc
Confidence            7553

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.92  E-value=1.3e-25  Score=249.29  Aligned_cols=153  Identities=22%  Similarity=0.345  Sum_probs=135.2

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEc-----CCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCC
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVER-----SSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKD  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k-----~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~  253 (1310)
                      ...++|++.+.||+|+||.||+|.++     .+++.||+|++..... .....+.+|+.+|+.++||||+++++++.+.+
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~  101 (322)
T 1p4o_A           22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ  101 (322)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred             chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC
Confidence            45578999999999999999999887     4688999999975432 34456889999999999999999999999999


Q ss_pred             eEEEEEecCCCCchHHHhhhc----------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEE
Q psy5279         254 SFTIISELAGGGELLHSLTRQ----------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL  323 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~----------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKL  323 (1310)
                      .+++||||++||+|.+.+...          ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||
T Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~--~~kl  179 (322)
T 1p4o_A          102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF--TVKI  179 (322)
T ss_dssp             SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC--CEEE
T ss_pred             ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCC--eEEE
Confidence            999999999999999988642          3478999999999999999999999999999999999998655  7999


Q ss_pred             EeeccceeecC
Q psy5279         324 TDFGLSRRITS  334 (1310)
Q Consensus       324 sDFGLAr~i~~  334 (1310)
                      +|||+|+....
T Consensus       180 ~Dfg~~~~~~~  190 (322)
T 1p4o_A          180 GDFGMTRDIYE  190 (322)
T ss_dssp             CCTTCCCGGGG
T ss_pred             CcCcccccccc
Confidence            99999987644

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.92  E-value=3.1e-27  Score=261.97  Aligned_cols=147  Identities=15%  Similarity=0.347  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHHHHHHCC--ceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-----------cccCCCCCCcc
Q psy5279         949 AYCVTSVLDGLQYLHWRG--LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-----------IHPINTPNPEF 1015 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~g--IVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-----------~~~~~tGtp~Y 1015 (1310)
                      ..++.||+.||.|||++|  |+||||||+|||++.  +..+||+|||+++........           ......|++.|
T Consensus       139 ~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y  216 (337)
T 3ll6_A          139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN--QGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMY  216 (337)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECT--TSCEEBCCCTTCBCCSSCC------------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECC--CCCEEEecCccceeccccCcccccccccccchhhccccCCCCc
Confidence            456789999999999999  999999999999985  457999999998765432211           01123478999


Q ss_pred             cccccc---cCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCc
Q psy5279        1016 AAPEVL---AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEV 1091 (1310)
Q Consensus      1016 ~APEvl---~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~ 1091 (1310)
                      +|||++   .+..++.++|||||||++|+|++|..||.+.........    .+..+ .....++...+|+.+|+. ++.
T Consensus       217 ~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~li~~~l~~~p~  291 (337)
T 3ll6_A          217 RTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG----KYSIP-PHDTQYTVFHSLIRAMLQVNPE  291 (337)
T ss_dssp             -------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------CCCC-TTCCSSGGGHHHHHHHSCSSGG
T ss_pred             CChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcC----cccCC-cccccchHHHHHHHHHccCChh
Confidence            999998   566788899999999999999999999987654433221    11111 123456678899999887 566


Q ss_pred             chhcHHhhhCC
Q psy5279        1092 DWITLANNIDH 1102 (1310)
Q Consensus      1092 ~rit~~e~L~H 1102 (1310)
                      +|+++.+++++
T Consensus       292 ~Rps~~e~l~~  302 (337)
T 3ll6_A          292 ERLSIAEVVHQ  302 (337)
T ss_dssp             GSCCHHHHHHH
T ss_pred             hCcCHHHHHHH
Confidence            79999888765

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.92  E-value=2.5e-25  Score=239.65  Aligned_cols=148  Identities=21%  Similarity=0.324  Sum_probs=133.5

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .++|++.+.||+|+||.||+|.+. +++.||+|++..... ..+.+.+|+.+|+.++||||+++++++...+.+|+||||
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF   84 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred             hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence            367999999999999999999986 678899999975433 346788999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         262 AGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       262 ~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ++||+|.+.+... ..+++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++...
T Consensus        85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~--~~kl~dfg~~~~~~  155 (267)
T 3t9t_A           85 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ--VIKVSDFGMTRFVL  155 (267)
T ss_dssp             CTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGG--CEEECCTTGGGGBC
T ss_pred             CCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCC--CEEEcccccccccc
Confidence            9999999998765 4589999999999999999999999999999999999997654  79999999998764

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=7.1e-26  Score=260.91  Aligned_cols=150  Identities=21%  Similarity=0.283  Sum_probs=123.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCC---cEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEE-eCCeEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSG---RNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYE-TKDSFTI  257 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg---~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~-~~~~lyL  257 (1310)
                      ..|.+.+.||+|+||.||+|....++   ..||+|.+.... ....+.+.+|+.+|++++|||||++++++. .++..|+
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l  168 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  168 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence            45889999999999999999986443   468999886533 244567889999999999999999999865 4568899


Q ss_pred             EEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         258 ISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ||||++||+|.+.+.... .+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus       169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--~~kL~DFG~a~~~~~  244 (373)
T 3c1x_A          169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYD  244 (373)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC--CEEECCC--------
T ss_pred             EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCC--CEEEeeccccccccc
Confidence            999999999999997654 489999999999999999999999999999999999998655  899999999987644

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.92  E-value=1.6e-25  Score=276.59  Aligned_cols=161  Identities=23%  Similarity=0.401  Sum_probs=136.3

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcC-CCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe---
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERS-SGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS---  254 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~-Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~---  254 (1310)
                      .+.++|++.+.||+|+||.||+|.++. +|+.||||++.... ......+.+|+.+|++++|||||+++++|...+.   
T Consensus        77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~  156 (681)
T 2pzi_A           77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD  156 (681)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred             EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence            456889999999999999999999986 79999999886543 2345568899999999999999999999998776   


Q ss_pred             --EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         255 --FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       255 --lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                        +|||||||+|++|.+.+..  .+++.++..++.||+.||.|||++|||||||||+|||++.+   .+||+|||+|+.+
T Consensus       157 ~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~---~~kl~DFG~a~~~  231 (681)
T 2pzi_A          157 PVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE---QLKLIDLGAVSRI  231 (681)
T ss_dssp             EEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS---CEEECCCTTCEET
T ss_pred             ceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC---cEEEEecccchhc
Confidence              7999999999999887654  69999999999999999999999999999999999999753   6999999999987


Q ss_pred             cCCCCCCCcccchHHH
Q psy5279         333 TSFGKLNPLEYDVRYV  348 (1310)
Q Consensus       333 ~~~~~l~~~~~t~~yv  348 (1310)
                      ...   ...+||+.|+
T Consensus       232 ~~~---~~~~gt~~y~  244 (681)
T 2pzi_A          232 NSF---GYLYGTPGFQ  244 (681)
T ss_dssp             TCC---SCCCCCTTTS
T ss_pred             ccC---CccCCCcccc
Confidence            543   3345565443

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=8.8e-27  Score=254.89  Aligned_cols=149  Identities=20%  Similarity=0.239  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC---cccccCCCCCCcccccccccCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG---TLIHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g---~~~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++......   ........+++.|+|||++.+..
T Consensus       127 ~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  204 (298)
T 3pls_A          127 ISFGLQVARGMEYLAEQKFVHRDLAARNCMLDE--SFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR  204 (298)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT--TCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC--CCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCC
Confidence            345679999999999999999999999999975  4579999999987543211   11122334678999999999999


Q ss_pred             CCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++.++|||||||++|+|++ |.+||.+.+..+....+.....  ......+++++.+++..|+. ++.+|+++.+++.
T Consensus       205 ~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          205 FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR--LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCC--CCCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999999 5666766666666555443321  11234678899999999887 5567888877653

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.92  E-value=1.1e-26  Score=284.52  Aligned_cols=148  Identities=21%  Similarity=0.264  Sum_probs=115.1

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||+|||++|||||||||+|||++.  +..+||+|||+++........  ....+.+++.|+|||++.+..+
T Consensus       439 ~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~--~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~  516 (613)
T 2ozo_A          439 AELLHQVSMGMKYLEEKNFVHRNLAARNVLLVN--RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF  516 (613)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE--TTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcC--CCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCC
Confidence            345679999999999999999999999999986  457999999999765432211  1223445689999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +.++|||||||++|+|++ |..||.+.+..+....+.... + ......++++..+++..|+. ++.+|+++.+++
T Consensus       517 ~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~-~-~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~  590 (613)
T 2ozo_A          517 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK-R-MECPPECPPELYALMSDCWIYKWEDRPDFLTVE  590 (613)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTC-C-CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-C-CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            999999999999999998 999999988888777665432 1 12235688999999999886 566788887764

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.92  E-value=1.7e-25  Score=275.27  Aligned_cols=143  Identities=24%  Similarity=0.387  Sum_probs=128.1

Q ss_pred             ceecccCceEEEEEEE--cCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVE--RSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~--k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      +.||+|+||.||+|.+  +.+++.||||+++...  ....+.+.+|+.+|++|+|||||++++++.. +.++||||||+|
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            4799999999999955  4677899999997542  2346779999999999999999999999975 568999999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+|.+.+.....+++..+..++.||+.||+|||++|||||||||+|||++.++  .+||+|||+|+.+..
T Consensus       454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~--~~kL~DFGla~~~~~  521 (635)
T 4fl3_A          454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH--YAKISDFGLSKALRA  521 (635)
T ss_dssp             EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT--EEEECCTTHHHHTTC
T ss_pred             CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCC--CEEEEEcCCcccccc
Confidence            99999998888899999999999999999999999999999999999998765  899999999997754

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=4.5e-25  Score=245.50  Aligned_cols=162  Identities=22%  Similarity=0.302  Sum_probs=132.5

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc--CCCCcceEEEEEEeC----C
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL--CHRNLVRLHDSYETK----D  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L--~HPNIVkL~d~f~~~----~  253 (1310)
                      .+.++|++.+.||+|+||.||+|.+.  |+.||||++...   ......+|.+++..+  +||||+++++++...    .
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~  108 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT  108 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred             ccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence            45678999999999999999999875  899999998643   233445566666554  999999999999988    7


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhC--------CeeecCCCCCCEEeecCCCCeEEEEe
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL--------SIAHLGLTPGDLLVAHPGGRHLLLTD  325 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~--------gIVHRDLKPeNILL~~~~~~~VKLsD  325 (1310)
                      .+|+||||++||+|.+.+... .+++..+..++.|++.||.|||++        ||+||||||+|||++.++  .+||+|
T Consensus       109 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~--~~kl~D  185 (337)
T 3mdy_A          109 QLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG--TCCIAD  185 (337)
T ss_dssp             EEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTS--CEEECC
T ss_pred             ceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCC--CEEEEe
Confidence            899999999999999998654 699999999999999999999999        999999999999998655  899999


Q ss_pred             eccceeecCCCCC-----CCcccchHHHh
Q psy5279         326 FGLSRRITSFGKL-----NPLEYDVRYVR  349 (1310)
Q Consensus       326 FGLAr~i~~~~~l-----~~~~~t~~yv~  349 (1310)
                      ||+|+.+......     ...++|+.|++
T Consensus       186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~a  214 (337)
T 3mdy_A          186 LGLAVKFISDTNEVDIPPNTRVGTKRYMP  214 (337)
T ss_dssp             CTTCEECC---------CCSSCSCGGGCC
T ss_pred             CCCceeeccccccccCCCCCCccCcceeC
Confidence            9999877543321     23455655543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.92  E-value=1.1e-26  Score=257.01  Aligned_cols=149  Identities=19%  Similarity=0.275  Sum_probs=111.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccC----CcccccCCCCCCcccccccccC-
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKL----GTLIHPINTPNPEFAAPEVLAE- 1023 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~----g~~~~~~~tGtp~Y~APEvl~~- 1023 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.   +.+||+|||++......    .........|++.|+|||++.+ 
T Consensus       133 ~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  209 (319)
T 2y4i_B          133 RQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDN---GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQL  209 (319)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC-----CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCB
T ss_pred             HHHHHHHHHHHHHHHhCCccccCCChhhEEEeC---CCEEEeecCCccccccccccccccccccCCCcccccChHHhhhc
Confidence            446789999999999999999999999999973   46899999987654211    1111223346789999999975 


Q ss_pred             --------CCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchh
Q psy5279        1024 --------EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWI 1094 (1310)
Q Consensus      1024 --------~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~ri 1094 (1310)
                              ..++.++|||||||++|+|++|..||.+.........+...... ......++++..+++..|+. ++.+|+
T Consensus       210 ~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rp  288 (319)
T 2y4i_B          210 SPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP-NLSQIGMGKEISDILLFCWAFEQEERP  288 (319)
T ss_dssp             SCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCC-CCCCSSCCTTHHHHHHHHHCSSTTTSC
T ss_pred             cccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCC-CCCcCCCCHHHHHHHHHHhcCChhhCc
Confidence                    35788999999999999999999999998877766555433221 11223577889999999886 567798


Q ss_pred             cHHhhhC
Q psy5279        1095 TLANNID 1101 (1310)
Q Consensus      1095 t~~e~L~ 1101 (1310)
                      ++.++++
T Consensus       289 t~~~l~~  295 (319)
T 2y4i_B          289 TFTKLMD  295 (319)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            8887664

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=1.2e-24  Score=238.43  Aligned_cols=150  Identities=27%  Similarity=0.382  Sum_probs=130.6

Q ss_pred             CCeeeec-eecccCceEEEEEEEc--CCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         183 DAYDFGD-ELGRGVTGIVYHAVER--SSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       183 d~Y~i~~-~LG~GsFG~Vyka~~k--~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ++|.+.+ .||+|+||.||+|.++  .+++.||+|++.... ....+.+.+|+.+|+.++||||+++++++ ..+.+++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            5566665 9999999999999864  578889999997643 23456788999999999999999999999 55679999


Q ss_pred             EecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         259 SELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |||++||+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.+...
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~kl~Dfg~~~~~~~~  163 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH--YAKISDFGLSKALGAD  163 (287)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETT--EEEECCCTTCEECTTC
T ss_pred             EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCC--CEEECcccceeeeccC
Confidence            9999999999988654 4599999999999999999999999999999999999998765  8999999999987543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.92  E-value=2.6e-25  Score=248.53  Aligned_cols=155  Identities=26%  Similarity=0.346  Sum_probs=131.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEE-----EcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAV-----ERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~-----~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~  253 (1310)
                      ...++|++.+.||+|+||.||+|.     +..+++.||||++.... ......+.+|+.+|++++||||+++++++...+
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  106 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  106 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence            345789999999999999999999     66788999999996543 234556889999999999999999999999999


Q ss_pred             eEEEEEecCCCCchHHHhhhc-------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEe
Q psy5279         254 SFTIISELAGGGELLHSLTRQ-------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTD  325 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~-------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsD  325 (1310)
                      .+|+||||++||+|.+.+...       ..+++.++..++.||+.||.|||++||+||||||+|||++.++ +..+||+|
T Consensus       107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~D  186 (327)
T 2yfx_A          107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD  186 (327)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECc
Confidence            999999999999999998764       3489999999999999999999999999999999999998543 34799999


Q ss_pred             eccceeecC
Q psy5279         326 FGLSRRITS  334 (1310)
Q Consensus       326 FGLAr~i~~  334 (1310)
                      ||+++....
T Consensus       187 fg~~~~~~~  195 (327)
T 2yfx_A          187 FGMARDIYR  195 (327)
T ss_dssp             CHHHHHHHC
T ss_pred             ccccccccc
Confidence            999986643

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.92  E-value=6.8e-25  Score=238.57  Aligned_cols=149  Identities=25%  Similarity=0.359  Sum_probs=131.6

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ..++|++.+.||+|+||.||+|.+. +++.||+|++.... ...+.+.+|+.+|+.++||||+++++++. .+.+|+|||
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e   87 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITE   87 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEe
Confidence            4578999999999999999999865 57789999996543 34567889999999999999999999986 456899999


Q ss_pred             cCCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         261 LAGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |++||+|.+.+....  .+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        88 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~--~~kl~Dfg~~~~~~~  161 (279)
T 1qpc_A           88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIED  161 (279)
T ss_dssp             CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS--CEEECCCTTCEECSS
T ss_pred             cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCC--CEEECCCcccccccC
Confidence            999999999986543  699999999999999999999999999999999999998654  799999999988754

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.92  E-value=1.9e-26  Score=284.67  Aligned_cols=149  Identities=17%  Similarity=0.220  Sum_probs=115.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++............+.+++.|+|||++.+..++.
T Consensus       494 ~~i~~qi~~aL~~LH~~givHrDikp~NILl~~--~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  571 (656)
T 2j0j_A          494 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS  571 (656)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE--TTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHHHHhCCccccccchHhEEEeC--CCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCc
Confidence            345679999999999999999999999999986  467999999999765433332333455678999999999889999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++|||||||++|+|++ |..||.+.+..+....+.....  ......+++++.+++.+|+. +|.+|+++.+++.
T Consensus       572 ~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          572 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER--LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC--CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            9999999999999997 9999999888777666544321  12335688999999999886 5567888877653

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.92  E-value=1.1e-24  Score=260.17  Aligned_cols=199  Identities=16%  Similarity=0.214  Sum_probs=153.3

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCC-CCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCH-RNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~H-PNIVkL~d~f~~~~~lyLV  258 (1310)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||||++.....  ...+.+|+.+|+.|.| ++|+.+..++...+..+||
T Consensus         4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lv   81 (483)
T 3sv0_A            4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLV   81 (483)
T ss_dssp             EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred             CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence            356889999999999999999999999999999999875432  2246789999999987 5566777777888999999


Q ss_pred             EecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeec-CCCCeEEEEeeccceeecCCC
Q psy5279         259 SELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAH-PGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~-~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |||+ |++|.+.+.. ...+++.++..++.||+.||.|||++|||||||||+||||+. +....+||+|||+|+.+....
T Consensus        82 me~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~  160 (483)
T 3sv0_A           82 MDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS  160 (483)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             EECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence            9999 8999998874 456999999999999999999999999999999999999941 123489999999999876543


Q ss_pred             CC--------CCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCC
Q psy5279         337 KL--------NPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNS  403 (1310)
Q Consensus       337 ~l--------~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~  403 (1310)
                      ..        ...++|+.|+     +|++..+.                 .++...| | +|+.+...++.+.|+..
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~-----aPE~~~~~-----------------~~s~~sDvwSlGvil~elltG~~Pf~~  215 (483)
T 3sv0_A          161 THQHIPYRENKNLTGTARYA-----SVNTHLGI-----------------EQSRRDDLESLGYVLMYFLRGSLPWQG  215 (483)
T ss_dssp             TCCBCCCCCCCCCCSCTTTC-----CHHHHTTC-----------------CCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             cccccccccccccCCCcccc-----CHHHhcCC-----------------CCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence            21        1345555554     34432211                 1333456 4 66667776666665543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.92  E-value=4.5e-25  Score=240.62  Aligned_cols=151  Identities=30%  Similarity=0.377  Sum_probs=130.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcC---CCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERS---SGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~---Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ..++|++.+.||+|+||.||+|.+..   ++..||+|++.... ....+.+.+|+.+|+.++||||+++++++..+ ..|
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence            45789999999999999999998754   34569999987643 33456788999999999999999999998754 568


Q ss_pred             EEEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         257 IISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +||||++||+|.+.+.... .+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~  165 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE--CVKLGDFGLSRYIED  165 (281)
T ss_dssp             EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETT--EEEECCCCGGGCC--
T ss_pred             EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCC--cEEeCccCCCccccc
Confidence            9999999999999987653 499999999999999999999999999999999999998765  899999999987654

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.92  E-value=7.6e-25  Score=268.32  Aligned_cols=149  Identities=27%  Similarity=0.401  Sum_probs=129.5

Q ss_pred             CCeeeec-eecccCceEEEEEEEc--CCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         183 DAYDFGD-ELGRGVTGIVYHAVER--SSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       183 d~Y~i~~-~LG~GsFG~Vyka~~k--~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      +.+.+.+ .||+|+||.||+|.++  .++..||||+++... ....+.+.+|+.+|++|+|||||+++++|.. +.+|||
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv  413 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV  413 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence            4455555 8999999999999876  456679999997643 2356778999999999999999999999976 569999


Q ss_pred             EecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         259 SELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ||||.||+|.+.+... ..+++.++..++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus       414 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~--~vkL~DFGla~~~~~  488 (613)
T 2ozo_A          414 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRH--YAKISDFGLSKALGA  488 (613)
T ss_dssp             EECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT--EEEECCCSTTTTCC-
T ss_pred             EEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCC--cEEEeeccCcccccC
Confidence            9999999999998654 4599999999999999999999999999999999999998765  899999999987644

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.92  E-value=6.2e-25  Score=244.41  Aligned_cols=190  Identities=25%  Similarity=0.405  Sum_probs=143.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecC
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA  262 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~  262 (1310)
                      ++|++.+.||+|+||.||+|.+.  ++.||+|++...  ...+.+.+|+.+|++++|||||++++++.  +..++||||+
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~   81 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA   81 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred             hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence            57999999999999999999864  789999998643  34567889999999999999999999887  4489999999


Q ss_pred             CCCchHHHhhhcC---CCCHHHHHHHHHHHHHHHHHhhh---CCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         263 GGGELLHSLTRQS---YYTEYDIAHYIRQLLSGLDYMHR---LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       263 ~GGeL~~~l~~~~---~lsE~~i~~ii~QIl~GL~YLHs---~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      +||+|.+.+....   .+++..+..++.||+.||.|||+   +||+||||||+|||++.++ ..+||+|||+|+..... 
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~-~~~kl~Dfg~~~~~~~~-  159 (307)
T 2eva_A           82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG-TVLKICDFGTACDIQTH-  159 (307)
T ss_dssp             TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTT-TEEEECCCCC--------
T ss_pred             CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCC-CEEEEcccccccccccc-
Confidence            9999999997654   37899999999999999999999   8999999999999998654 35899999999866432 


Q ss_pred             CCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCC
Q psy5279         337 KLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNS  403 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~  403 (1310)
                       .....+|+.|     .+|++..+.                 .++...| | .|..+...++.+.|.++
T Consensus       160 -~~~~~gt~~y-----~aPE~~~~~-----------------~~~~~~Di~slG~il~el~~g~~p~~~  205 (307)
T 2eva_A          160 -MTNNKGSAAW-----MAPEVFEGS-----------------NYSEKCDVFSWGIILWEVITRRKPFDE  205 (307)
T ss_dssp             ------CCTTS-----SCHHHHTCC-----------------CCCTHHHHHHHHHHHHHHHHTCCTTTT
T ss_pred             -cccCCCCCce-----EChhhhCCC-----------------CCCcHHHHHHHHHHHHHHHHCCCCchh
Confidence             2223344443     445543211                 1233456 4 66777777777766544

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.92  E-value=1.6e-26  Score=258.15  Aligned_cols=151  Identities=17%  Similarity=0.210  Sum_probs=110.4

Q ss_pred             HHHHHHHHHHHHHH--------HCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc---cccCCCCCCccccc
Q psy5279         950 YCVTSVLDGLQYLH--------WRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---IHPINTPNPEFAAP 1018 (1310)
Q Consensus       950 ~i~~QIl~AL~yLH--------s~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~---~~~~~tGtp~Y~AP 1018 (1310)
                      .++.||+.||.|||        ++||+||||||+|||++.  +..+||+|||++.........   ......||+.|+||
T Consensus       143 ~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aP  220 (342)
T 1b6c_B          143 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK--NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP  220 (342)
T ss_dssp             HHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECT--TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECC--CCCEEEEECCCceeccccccccccccccCCcCcccCCH
Confidence            35679999999999        899999999999999975  457999999999766543321   12334678999999


Q ss_pred             ccccCCC------CCCccchhHHHHHHHHHhcC----------CCCCCCCC-----hhHHHhhhccccc--ccccc--ch
Q psy5279        1019 EVLAEEP------IFPQTDVWSAGVLAYVLLSG----------ASPFRGQS-----EPETRQNVNFVRY--RFEYL--FK 1073 (1310)
Q Consensus      1019 Evl~~~~------ys~ksDIWSLGViLyeLLtG----------~~PF~g~~-----~~e~~~~I~~~~~--~f~~~--~~ 1073 (1310)
                      |++.+..      ++.++|||||||++|+|++|          ..||....     .......+.....  .++..  ..
T Consensus       221 E~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (342)
T 1b6c_B          221 EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC  300 (342)
T ss_dssp             HHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTS
T ss_pred             hhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccch
Confidence            9998763      23679999999999999999          88997653     2233333322222  22221  12


Q ss_pred             hccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1074 ELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1074 ~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ..++...+++.+|+. ++.+|+++.++++|
T Consensus       301 ~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          301 EALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             HHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             hHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            455678899998886 66789999887754

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.92  E-value=1.5e-24  Score=242.21  Aligned_cols=162  Identities=23%  Similarity=0.338  Sum_probs=138.1

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHh--cCCCCcceEEEEEEeCC----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQ--LCHRNLVRLHDSYETKD----  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~--L~HPNIVkL~d~f~~~~----  253 (1310)
                      .+.++|.+.+.||+|+||.||+|.+  +|+.||||++...   ....+.+|++++..  ++||||+++++++...+    
T Consensus        39 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~  113 (342)
T 1b6c_B           39 TIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT  113 (342)
T ss_dssp             HHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred             cccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence            3557899999999999999999987  5999999998643   34567789999988  79999999999999886    


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhh--------hCCeeecCCCCCCEEeecCCCCeEEEEe
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH--------RLSIAHLGLTPGDLLVAHPGGRHLLLTD  325 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLH--------s~gIVHRDLKPeNILL~~~~~~~VKLsD  325 (1310)
                      .+|+||||+++|+|.+.+.. ..+++.++..++.||+.||.|||        ++||+||||||+|||++.++  .+||+|
T Consensus       114 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~--~~kL~D  190 (342)
T 1b6c_B          114 QLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG--TCCIAD  190 (342)
T ss_dssp             CEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTS--CEEECC
T ss_pred             eeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCC--CEEEEE
Confidence            89999999999999999865 46999999999999999999999        89999999999999998655  799999


Q ss_pred             eccceeecCCCC-----CCCcccchHHHh
Q psy5279         326 FGLSRRITSFGK-----LNPLEYDVRYVR  349 (1310)
Q Consensus       326 FGLAr~i~~~~~-----l~~~~~t~~yv~  349 (1310)
                      ||+|+.......     ....++|+.|.+
T Consensus       191 fg~~~~~~~~~~~~~~~~~~~~gt~~y~a  219 (342)
T 1b6c_B          191 LGLAVRHDSATDTIDIAPNHRVGTKRYMA  219 (342)
T ss_dssp             CTTCEEEETTTTEEEECCCSCCCCGGGCC
T ss_pred             CCCceeccccccccccccccCCcCcccCC
Confidence            999998765432     233455655543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.92  E-value=1e-24  Score=243.36  Aligned_cols=146  Identities=27%  Similarity=0.399  Sum_probs=122.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHH--HHhcCCCCcceEEEEEEe-----CC
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDI--MNQLCHRNLVRLHDSYET-----KD  253 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~I--L~~L~HPNIVkL~d~f~~-----~~  253 (1310)
                      -.++|++.+.||+|+||.||+|..  +++.||||++....   ...+..|..+  +..++||||+++++.+..     ..
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   85 (336)
T 3g2f_A           11 DLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM   85 (336)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred             ChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence            357899999999999999999965  78999999997432   2334444444  556899999999986543     33


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhC---------CeeecCCCCCCEEeecCCCCeEEEE
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL---------SIAHLGLTPGDLLVAHPGGRHLLLT  324 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~---------gIVHRDLKPeNILL~~~~~~~VKLs  324 (1310)
                      .+|||||||+||+|.+.+... .+++..+..++.||+.||.|||++         ||+||||||+|||++.++  .+||+
T Consensus        86 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~--~~kL~  162 (336)
T 3g2f_A           86 EYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDG--TCVIS  162 (336)
T ss_dssp             EEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTS--CEEEC
T ss_pred             eEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCC--cEEEe
Confidence            679999999999999998654 468899999999999999999999         999999999999998655  89999


Q ss_pred             eeccceeecC
Q psy5279         325 DFGLSRRITS  334 (1310)
Q Consensus       325 DFGLAr~i~~  334 (1310)
                      |||+|+.+..
T Consensus       163 DFG~a~~~~~  172 (336)
T 3g2f_A          163 DFGLSMRLTG  172 (336)
T ss_dssp             CCTTCEECSS
T ss_pred             eccceeeccc
Confidence            9999998754

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.92  E-value=5.8e-25  Score=264.86  Aligned_cols=148  Identities=25%  Similarity=0.379  Sum_probs=131.1

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ..+.|++.+.||+|+||.||+|.+.. +..||||++.... ...+.+.+|+.+|++|+|||||++++++.. +.+|||||
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e  341 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE  341 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred             chhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence            34679999999999999999999875 4679999997543 335678999999999999999999999876 77999999


Q ss_pred             cCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         261 LAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       261 y~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ||.+|+|.+.+...  ..+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+.
T Consensus       342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~--~~kl~DFG~a~~~~  414 (535)
T 2h8h_A          342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL--VCKVADFGLARLIE  414 (535)
T ss_dssp             CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--CEEECCTTSTTTCC
T ss_pred             hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCC--cEEEcccccceecC
Confidence            99999999999743  4599999999999999999999999999999999999997654  79999999998764

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.92  E-value=3e-26  Score=252.55  Aligned_cols=150  Identities=15%  Similarity=0.266  Sum_probs=111.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||.|||++||+||||||+|||++.  +..+||+|||++........ .......|++.|+|||++.+ .++
T Consensus       136 ~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~  212 (307)
T 2nru_A          136 CKIAQGAANGINFLHENHHIHRDIKSANILLDE--AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EIT  212 (307)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT--TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EEC
T ss_pred             HHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcC--CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCC
Confidence            446789999999999999999999999999975  45799999999876543221 22233467899999999875 478


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhh----hccccc--------cccccchhccHHHHHHHHHhcc-CCcchh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN----VNFVRY--------RFEYLFKELTQEATRFLMLIFK-HEVDWI 1094 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~----I~~~~~--------~f~~~~~~lS~eakdLL~~il~-~~~~ri 1094 (1310)
                      .++|||||||++|+|++|..||.+.........    +.....        .++......+....+++..|+. ++.+|+
T Consensus       213 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp  292 (307)
T 2nru_A          213 PKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRP  292 (307)
T ss_dssp             THHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSC
T ss_pred             ccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCc
Confidence            899999999999999999999987654322111    111111        1112234456778899998886 567899


Q ss_pred             cHHhhhC
Q psy5279        1095 TLANNID 1101 (1310)
Q Consensus      1095 t~~e~L~ 1101 (1310)
                      ++.++++
T Consensus       293 s~~~l~~  299 (307)
T 2nru_A          293 DIKKVQQ  299 (307)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9887664

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.91  E-value=6.9e-25  Score=258.32  Aligned_cols=149  Identities=25%  Similarity=0.378  Sum_probs=129.4

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ..+.|++.+.||+|+||.||+|.+.. +..||||++.... ...+.+.+|+.+|++|+|||||++++++.. +.+|||||
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e  258 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE  258 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence            34679999999999999999999875 4679999997543 335678999999999999999999999876 77899999


Q ss_pred             cCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         261 LAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       261 y~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ||++|+|.+.+...  ..+++.++..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+..
T Consensus       259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~--~~kl~DfG~a~~~~~  332 (452)
T 1fmk_A          259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL--VCKVADFGLARLIED  332 (452)
T ss_dssp             CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--CEEECCCCTTC----
T ss_pred             hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCC--CEEECCCccceecCC
Confidence            99999999999743  4599999999999999999999999999999999999998654  799999999987654

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.91  E-value=5.3e-26  Score=271.67  Aligned_cols=153  Identities=18%  Similarity=0.220  Sum_probs=115.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec-CCCcEEEEeeccceeeccCCcc------cccCCCCCCccccccc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLGTL------IHPINTPNPEFAAPEV 1020 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~-~~~~VKL~DFGlAk~~~~~g~~------~~~~~tGtp~Y~APEv 1020 (1310)
                      +..++.||+.||.|||++|||||||||+|||++.. ....+||+|||+++........      ......||+.|+|||+
T Consensus       105 ~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~  184 (483)
T 3sv0_A          105 VLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNT  184 (483)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHH
Confidence            34567899999999999999999999999999521 3567999999999876543221      1124567899999999


Q ss_pred             ccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhH---HHhhhccccc--cccccchhccHHHHHHHHHhcc-CCcchh
Q psy5279        1021 LAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE---TRQNVNFVRY--RFEYLFKELTQEATRFLMLIFK-HEVDWI 1094 (1310)
Q Consensus      1021 l~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e---~~~~I~~~~~--~f~~~~~~lS~eakdLL~~il~-~~~~ri 1094 (1310)
                      +.+..++.++|||||||++|+|++|..||.+.....   ....+.....  ..+.....++++..+|+..|+. ++.+|+
T Consensus       185 ~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RP  264 (483)
T 3sv0_A          185 HLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKP  264 (483)
T ss_dssp             HTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCC
T ss_pred             hcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCc
Confidence            999999999999999999999999999998865422   2222222111  1223346778999999999886 566788


Q ss_pred             cHHhhh
Q psy5279        1095 TLANNI 1100 (1310)
Q Consensus      1095 t~~e~L 1100 (1310)
                      ++.+++
T Consensus       265 s~~el~  270 (483)
T 3sv0_A          265 DYSYLK  270 (483)
T ss_dssp             CHHHHH
T ss_pred             CHHHHH
Confidence            877654

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.91  E-value=1.3e-24  Score=236.91  Aligned_cols=151  Identities=27%  Similarity=0.402  Sum_probs=124.7

Q ss_pred             CCCeeeeceecccCceEEEEEEEcC-CCc--EEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERS-SGR--NYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~-Tg~--~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~l  255 (1310)
                      .++|++.+.||+|+||.||+|.+.. +++  .||+|++....   ....+.+.+|+.+|+.++||||+++++++..++ .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            4689999999999999999998653 444  68999886542   234567889999999999999999999998765 8


Q ss_pred             EEEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         256 TIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++||||+++|+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+++.+..
T Consensus        96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~--~~kl~Dfg~~~~~~~  173 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD--LVKIGDFGLMRALPQ  173 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT--EEEECCCTTCEECCC
T ss_pred             eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCC--CEEEccccccccccc
Confidence            9999999999999988764 4599999999999999999999999999999999999998765  899999999998754


Q ss_pred             C
Q psy5279         335 F  335 (1310)
Q Consensus       335 ~  335 (1310)
                      .
T Consensus       174 ~  174 (291)
T 1u46_A          174 N  174 (291)
T ss_dssp             -
T ss_pred             c
Confidence            3

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.91  E-value=8.5e-25  Score=238.09  Aligned_cols=147  Identities=22%  Similarity=0.341  Sum_probs=124.3

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeC-CeEEEEEe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETK-DSFTIISE  260 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-~~lyLVmE  260 (1310)
                      .++|++.+.||+|+||.||+|.+  +|+.||+|++....  ..+.+.+|+.+|+.++||||+++++++... +.+|+|||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e   95 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   95 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence            46899999999999999999976  48899999986432  456788999999999999999999997554 57999999


Q ss_pred             cCCCCchHHHhhhcCC--CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         261 LAGGGELLHSLTRQSY--YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~--lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+++|+|.+.+.....  +++..+..++.|++.||.|||++||+||||||+|||++.++  .+||+|||+++....
T Consensus        96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~~l~Dfg~~~~~~~  169 (278)
T 1byg_A           96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN--VAKVSDFGLTKEASS  169 (278)
T ss_dssp             CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS--CEEECCCCC------
T ss_pred             cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCC--cEEEeeccccccccc
Confidence            9999999999876543  89999999999999999999999999999999999998655  799999999986643

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.91  E-value=5.6e-26  Score=251.97  Aligned_cols=88  Identities=15%  Similarity=0.158  Sum_probs=74.5

Q ss_pred             CcchhhhhhccccchhhhHHHHhhccccceeeeecccCc----chhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH----DTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      ++|+....|.+|.||.|.+|..+. +++.||.|++.-..    +....+..|+..++.|+|+||..+++.+...    +.
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~----~~  105 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTA-LDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR----AG  105 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETT-TTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET----TE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecC-CCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC----Cc
Confidence            789999999999999999987654 78999999997653    3347788999999999999999999988654    55


Q ss_pred             hhHHHHhhcCchhhhhh
Q psy5279         672 AVLVMEKLQGADVLSYL  688 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~  688 (1310)
                      ..+|||+|.|.++..+|
T Consensus       106 ~~lv~e~~~g~~L~~~l  122 (286)
T 3uqc_A          106 GLVVAEWIRGGSLQEVA  122 (286)
T ss_dssp             EEEEEECCCEEEHHHHH
T ss_pred             EEEEEEecCCCCHHHHH
Confidence            78999999998776655

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.91  E-value=2.7e-24  Score=265.57  Aligned_cols=152  Identities=25%  Similarity=0.308  Sum_probs=132.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCC---CcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSS---GRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~T---g~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ..++|++.+.||+|+||.||+|.++.+   +..||+|++.... ....+.+.+|+.+|++++|||||++++++. ++.+|
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~  466 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW  466 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence            457899999999999999999998754   4679999886533 334567889999999999999999999985 56789


Q ss_pred             EEEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         257 IISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      +||||++||+|.+.+.... .+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.....
T Consensus       467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~--~vkL~DFG~a~~~~~~  544 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND--CVKLGDFGLSRYMEDS  544 (656)
T ss_dssp             EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT--EEEECCCCCCCSCCC-
T ss_pred             EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCC--CEEEEecCCCeecCCC
Confidence            9999999999999987554 589999999999999999999999999999999999998765  8999999999877543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.90  E-value=2.1e-24  Score=238.80  Aligned_cols=148  Identities=22%  Similarity=0.356  Sum_probs=127.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      ...+.|++.+.||+|+||.||+|.+..   .+|+|++....  ....+.+.+|+.+|++++||||+++++++...+.+++
T Consensus        30 i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i  106 (319)
T 2y4i_B           30 IPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI  106 (319)
T ss_dssp             SCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred             CCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence            345789999999999999999998764   49999986532  2233457789999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         258 ISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ||||+.|++|.+.+.... .+++.++..++.||+.||.|||++||+||||||+|||++ ++  .+||+|||+|+...
T Consensus       107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~--~~~l~Dfg~~~~~~  180 (319)
T 2y4i_B          107 ITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NG--KVVITDFGLFSISG  180 (319)
T ss_dssp             ECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC-----CCEECCCSCCC---
T ss_pred             EeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CC--CEEEeecCCccccc
Confidence            999999999999997654 599999999999999999999999999999999999997 33  79999999988653

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.90  E-value=3.6e-25  Score=273.51  Aligned_cols=140  Identities=22%  Similarity=0.295  Sum_probs=109.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||++|||||||||+|||++.   ..+||+|||+++.....     ....||+.|+|||++.+. ++.
T Consensus       185 ~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~---~~~kl~DFG~a~~~~~~-----~~~~gt~~y~aPE~~~~~-~~~  255 (681)
T 2pzi_A          185 IAYLLEILPALSYLHSIGLVYNDLKPENIMLTE---EQLKLIDLGAVSRINSF-----GYLYGTPGFQAPEIVRTG-PTV  255 (681)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS---SCEEECCCTTCEETTCC-----SCCCCCTTTSCTTHHHHC-SCH
T ss_pred             HHHHHHHHHHHHHHHHCCCeecccChHHeEEeC---CcEEEEecccchhcccC-----CccCCCccccCHHHHcCC-CCC
Confidence            445679999999999999999999999999985   36999999999865432     233578999999998765 478


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCCCccc
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDHEFWH 1106 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H~f~~ 1106 (1310)
                      ++|||||||++|+|++|.+||.+......         .........++...++|.+|+. ++.+|++..+.+.|+|..
T Consensus       256 ~sDi~slG~~l~~l~~g~~~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          256 ATDIYTVGRTLAALTLDLPTRNGRYVDGL---------PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEETTEECSSC---------CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             ceehhhhHHHHHHHHhCCCCCcccccccc---------cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            99999999999999999999976321110         0111123457889999999886 566788888888887754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	1310
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-36
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-21
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	6e-15
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	8e-11
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-10
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	9e-05
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-35
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-20
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-14
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	6e-11
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-10
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-05
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-34
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-20
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	8e-13
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-10
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-09
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	9e-05
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-33
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-18
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-13
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-12
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-08
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	8e-04
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-33
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-16
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-10
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-10
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-09
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	5e-04
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-33
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	9e-16
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-13
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-12
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-08
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-05
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-32
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-14
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-11
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-10
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-10
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-32
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-16
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-12
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-10
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	9e-09
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	8e-04
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-32
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-14
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-10
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	9e-10
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	7e-07
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	0.001
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-30
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-15
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-11
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-10
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-08
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	9e-05
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	7e-30
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-16
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-14
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-08
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-07
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-29
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-15
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	7e-13
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-09
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-08
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-04
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-29
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-16
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	9e-12
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	9e-11
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-06
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-04
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	4e-28
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	7e-12
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	4e-09
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-08
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-06
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	0.003
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-27
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-13
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-10
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-09
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	7e-08
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	0.004
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-26
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	5e-12
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-08
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-07
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-05
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-26
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-15
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	7e-11
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-10
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-09
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-26
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	9e-16
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-12
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-08
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	7e-07
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	0.002
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	7e-26
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	9e-08
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-07
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-06
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	0.001
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-25
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	7e-13
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-08
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-06
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-05
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	0.002
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-25
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-10
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-07
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	7e-07
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-25
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-13
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-05
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-04
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-25
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-14
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-08
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-07
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-06
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-25
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-13
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-11
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-07
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-06
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	9e-04
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	6e-25
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-11
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-08
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-06
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-05
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-24
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-11
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-06
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-24
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-09
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-08
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-06
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	8e-04
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	0.004
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-24
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-11
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-06
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	5e-06
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-24
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-13
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-12
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	7e-09
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-04
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	0.002
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	5e-24
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-11
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	9e-08
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-07
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	8e-24
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	6e-12
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	7e-08
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-07
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-05
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	9e-24
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-12
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-08
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-04
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-23
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-11
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-06
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-06
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-23
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	6e-13
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-08
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-07
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-05
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	0.001
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-23
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-09
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-07
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-05
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	0.001
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-23
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	8e-12
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	8e-08
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-07
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-05
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-23
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	8e-10
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	6e-07
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-06
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	0.001
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	0.003
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-23
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-12
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-07
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-23
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-11
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-05
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	0.001
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	5e-23
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-11
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-07
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-06
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-06
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	6e-23
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	8e-11
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-04
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	0.003
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-22
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-10
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	7e-08
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-06
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	8e-05
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	0.002
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-22
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-10
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-08
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-05
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-05
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-22
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-06
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	8e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-22
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	6e-13
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-07
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-06
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-05
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-22
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	8e-10
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	6e-08
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-04
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	0.002
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	0.003
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-22
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-14
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-05
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-05
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	0.003
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	9e-22
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-11
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-07
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-06
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-04
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-21
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-06
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	6e-06
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	6e-04
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	0.002
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-20
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-09
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-06
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	0.002
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	0.003
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	5e-20
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	6e-09
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	8e-06
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	0.002
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	9e-20
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-06
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-06
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-19
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-11
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	7e-07
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-06
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-05
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-19
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-09
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-07
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-04
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-04
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-19
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-09
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	7e-07
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-06
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	0.001
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-18
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-08
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-06
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	6e-04
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-17
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-07
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-06
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-05
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-16
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	7e-12
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-07
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-05
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	0.001
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-16
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-09
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-06
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	5e-16
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-05
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-15
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	6e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	5e-05
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	7e-04
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	7e-15
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-08
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	6e-06
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-04
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-11
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	5e-08
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-04
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	0.001
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	0.004
d1uema_	117	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	7e-07
d1ueya_	127	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	6e-06
d1wisa1	111	b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens)	6e-05
d1x4za1	108	b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {	2e-04
d2ic2a1	107	b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit	3e-04
d3dara1	97	b.1.1.4 (A:153-249) Fibroblast growth factor recep	5e-04
d1epfa2	92	b.1.1.4 (A:98-189) Neural cell adhesion molecule (	8e-04
d2cqva1	101	b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [T	0.002
d1x5ka1	111	b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [	0.002
d1biha4	89	b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecr	0.003
d1g1ca_	98	b.1.1.4 (A:) Titin {Human (Homo sapiens), differen	0.003
d1uena_	125	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	0.003
d1cs6a4	89	b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gall	0.004
d2fdbp2	109	b.1.1.4 (P:2252-2360) Fibroblast growth factor rec	0.004
d1x5ya1	98	b.1.2.1 (A:8-105) Myosin binding protein C, fast-t	0.004
d1x5la1	98	b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human	0.004

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  138 bits (348), Expect = 5e-36
 Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 1/177 (0%)

Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNEL 231
           + V+ +   + D YD  +ELG G  G+V+   ER++G N+AAK +       K   + E+
Sbjct: 15  QPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEI 74

Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLL 290
             M+ L H  LV LHD++E  +   +I E   GGEL   +  + +  +E +   Y+RQ+ 
Sbjct: 75  QTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC 134

Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRY 347
            GL +MH  +  HL L P +++        L L DFGL+  +     +        +
Sbjct: 135 KGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEF 191

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 94.4 bits (234), Expect = 4e-21
 Identities = 49/153 (32%), Positives = 86/153 (56%), Gaps = 6/153 (3%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            V  GL ++H     HL+++P+N++  + RS ++KLID G T  +    ++         E
Sbjct: 133  VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG--TAE 190

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFK 1073
            FAAPEV   +P+   TD+WS GVL+Y+LLSG SPF G+++ ET +NV    +  +   F 
Sbjct: 191  FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS 250

Query: 1074 ELTQEATRFL--MLIFKHEVDWITLANNIDHEF 1104
             ++++   F+  +L+       +T+   ++H +
Sbjct: 251  GISEDGKDFIRKLLLADPN-TRMTIHQALEHPW 282

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 75.5 bits (185), Expect = 6e-15
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 2/153 (1%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEV   +P+   TD+WS GVL+Y+LLSG SPF G+++ ET +NV    +  +   F  +
Sbjct: 193  APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGI 252

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDEYHD 1262
            +++   F+  +    P  R T+ +  E+ WL P     +  +       ++++     +D
Sbjct: 253  SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYD 312

Query: 1263 LKNKQFTSDSLSSLHKTLTRSNSIQEELISTAF 1295
               +        S + +L R +  QE  I  AF
Sbjct: 313  AWPEPLPPLGRISNYSSL-RKHRPQEYSIRDAF 344

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 62.8 bits (152), Expect = 8e-11
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 9/134 (6%)

Query: 586 PIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT-LHQVNTEF 644
           P+E   +   D Y    E+  G F VV +  E+A T N  AAK     H++    V  E 
Sbjct: 16  PVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERA-TGNNFAAKFVMTPHESDKETVRKEI 74

Query: 645 DNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE-YTEQNVATII 703
             +  LRH  + +L +A+       N  V++ E + G ++   ++  H   +E      +
Sbjct: 75  QTMSVLRHPTLVNLHDAF----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYM 130

Query: 704 SQAWE--HYLKKNR 715
            Q  +   ++ +N 
Sbjct: 131 RQVCKGLCHMHENN 144

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 60.9 bits (147), Expect = 4e-10
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)

Query: 463 PGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
            GGEL   +  + +  +E +   Y+RQ+  GL +MH  +  HL L P +++        L
Sbjct: 106 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL 165

Query: 522 LLTDFGLSRRITS 534
            L DFGL+  +  
Sbjct: 166 KLIDFGLTAHLDP 178

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 43.9 bits (103), Expect = 9e-05
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 47 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          + V+ +   + D YD  +ELG G  G+V+   ER++G N+AAK +
Sbjct: 15 QPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV 59

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  137 bits (346), Expect = 1e-35
 Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 2/178 (1%)

Query: 158 DNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT 217
           D   E  ++ Y   + V+ +   + D YD  +ELG G  G+V+  VE+++GR + AK + 
Sbjct: 5   DKFYEDIWKKYVP-QPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFIN 63

Query: 218 GKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY- 276
                 K   KNE+ IMNQL H  L+ LHD++E K    +I E   GGEL   +  + Y 
Sbjct: 64  TPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK 123

Query: 277 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            +E ++ +Y+RQ   GL +MH  SI HL + P +++        + + DFGL+ ++  
Sbjct: 124 MSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 181

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 90.9 bits (225), Expect = 5e-20
 Identities = 52/152 (34%), Positives = 88/152 (57%), Gaps = 4/152 (2%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
              +GL+++H   + HL+I+P+N++  + ++  VK+ID G   ++     +     T   E
Sbjct: 136  ACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATA--E 193

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFK 1073
            FAAPE++  EP+   TD+W+ GVL YVLLSG SPF G+ + ET QNV    + F E  F 
Sbjct: 194  FAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFS 253

Query: 1074 ELTQEATRFLMLIFKHEVDW-ITLANNIDHEF 1104
             ++ EA  F+  + + E    +T+ + ++H +
Sbjct: 254  SVSPEAKDFIKNLLQKEPRKRLTVHDALEHPW 285

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 73.6 bits (180), Expect = 3e-14
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 3/155 (1%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
            APE++  EP+   TD+W+ GVL YVLLSG SPF G+ + ET QNV    + F E  F  +
Sbjct: 196  APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 255

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDEYHD 1262
            + EA  F+  + ++ P KR TV +  E+ WL      +  R  +       ++  ++Y D
Sbjct: 256  SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYAD 315

Query: 1263 LKNKQFTSDSLSSLHKTLTRSNSIQEELISTAFTS 1297
                Q     +++      R +  QE  I  ++  
Sbjct: 316  WPAPQPAIGRIANFSS--LRKHRPQEYQIYDSYFD 348

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 63.5 bits (154), Expect = 6e-11
 Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 9/134 (6%)

Query: 586 PIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT-LHQVNTEF 644
           P+E       D Y  + E+  G F VV +  EKA T  +  AK     +    + V  E 
Sbjct: 19  PVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKA-TGRVFVAKFINTPYPLDKYTVKNEI 77

Query: 645 DNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSR-HEYTEQNVATII 703
             +  L H ++ +L +A+          VL++E L G ++   +++  ++ +E  V   +
Sbjct: 78  SIMNQLHHPKLINLHDAF----EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM 133

Query: 704 SQAWE--HYLKKNR 715
            QA E   ++ ++ 
Sbjct: 134 RQACEGLKHMHEHS 147

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 60.5 bits (146), Expect = 5e-10
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 463 PGGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
            GGEL   +  + Y  +E ++ +Y+RQ   GL +MH  SI HL + P +++        +
Sbjct: 109 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSV 168

Query: 522 LLTDFGLSRRITS 534
            + DFGL+ ++  
Sbjct: 169 KIIDFGLATKLNP 181

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 33 DNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          D   E  ++ Y   + V+ +   + D YD  +ELG G  G+V+  VE+++GR + AK +
Sbjct: 5  DKFYEDIWKKYVP-QPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI 62

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (336), Expect = 1e-34
 Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 2/156 (1%)

Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC 238
           K + + Y   ++LGRG  GIV+  VE SS + Y AK +  KG   + L K E+ I+N   
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIAR 59

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMH 297
           HRN++ LH+S+E+ +   +I E   G ++   +   ++   E +I  Y+ Q+   L ++H
Sbjct: 60  HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119

Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
             +I H  + P +++        + + +FG +R++ 
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.5 bits (224), Expect = 4e-20
 Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 6/159 (3%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
               V  V + LQ+LH   + H +I P+N++  + RS  +K+I+ G  +++          
Sbjct: 105  VSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF 164

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
              P  E+ APEV   + +   TD+WS G L YVLLSG +PF  ++  +  +N+    Y F
Sbjct: 165  TAP--EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF 222

Query: 1069 -EYLFKELTQEATRFL--MLIFKHEVDWITLANNIDHEF 1104
             E  FKE++ EA  F+  +L+ + +   +T +  + H +
Sbjct: 223  DEEAFKEISIEAMDFVDRLLVKERK-SRMTASEALQHPW 260

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (168), Expect = 8e-13
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 1145 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKELT 1203
            PEV   + +   TD+WS G L YVLLSG +PF  ++  +  +N+    Y F E  FKE++
Sbjct: 172  PEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS 231

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
             EA  F+  +  +    R T  E  ++ WL
Sbjct: 232  IEAMDFVDRLLVKERKSRMTASEALQHPWL 261

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 5e-10
 Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 8/123 (6%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERI 655
           +KY    ++ RG+F +V +  E  +++    AK  +        V  E   L   RH  I
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVET-SSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNI 63

Query: 656 ASLLEAYKPSTTASNIAVLVMEKLQGADVLSYL-SSRHEYTEQNVATIISQAWE--HYLK 712
             L E++     +    V++ E + G D+   + +S  E  E+ + + + Q  E   +L 
Sbjct: 64  LHLHESF----ESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119

Query: 713 KNR 715
            + 
Sbjct: 120 SHN 122

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 1e-09
 Identities = 13/72 (18%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 463 PGGELLHSLTRQSY-YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
            G ++   +   ++   E +I  Y+ Q+   L ++H  +I H  + P +++        +
Sbjct: 84  SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTI 143

Query: 522 LLTDFGLSRRIT 533
            + +FG +R++ 
Sbjct: 144 KIIEFGQARQLK 155

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 9e-05
 Identities = 19/43 (44%), Positives = 26/43 (60%)

Query: 54 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGT 96
          K + + Y   ++LGRG  GIV+  VE SS + Y AK +  KGT
Sbjct: 1  KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT 43

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (323), Expect = 2e-33
 Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 5/155 (3%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNELDIMNQLCH 239
           + ++ G  LG+G  G VY A E+ S    A KV+          +   + E++I + L H
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            N++RL+  +       +I E A  G +   L + S + E   A YI +L + L Y H  
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 125

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            + H  + P +LL+   G   L + DFG S    S
Sbjct: 126 RVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPS 158

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.0 bits (210), Expect = 1e-18
 Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            A  +T + + L Y H + + H +I+P+N+++ S  + ++K+ D G +             
Sbjct: 109  ATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPS-SRRTTLC 165

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
             T   ++  PE++       + D+WS GVL Y  L G  PF   +  ET + ++ V + F
Sbjct: 166  GTL--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 223

Query: 1069 EYLFKELTQEATRFLMLIFKHEV-DWITLANNIDHEF 1104
                  +T+ A   +  + KH       L   ++H +
Sbjct: 224  P---DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 257

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 1e-13
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 3/90 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
             PE++       + D+WS GVL Y  L G  PF   +  ET + ++ V + F      +T
Sbjct: 172  PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DFVT 228

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + A   +  + K  P +RP + E  E+ W+
Sbjct: 229  EGARDLISRLLKHNPSQRPMLREVLEHPWI 258

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (161), Expect = 3e-12
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 458 VPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG 517
           +    P G +   L + S + E   A YI +L + L Y H   + H  + P +LL+   G
Sbjct: 84  ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG 143

Query: 518 GRHLLLTDFGLSRRITS 534
              L + DFG S    S
Sbjct: 144 --ELKIADFGWSVHAPS 158

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (131), Expect = 2e-08
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 9/114 (7%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH----DTLHQVNTEFDNLRSLR 651
           + ++    + +GKF  V  A EK  ++ ++A K+   +        HQ+  E +    LR
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREK-QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 64

Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
           H  I  L   +      +    L++E      V   L    ++ EQ  AT I++
Sbjct: 65  HPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 114

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (94), Expect = 8e-04
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          + ++ G  LG+G  G VY A E+ S    A KV+
Sbjct: 6  EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL 39

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (324), Expect = 2e-33
 Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 3/160 (1%)

Query: 176 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMN 235
           TR     D ++   ELG G  G VY A  + +    AAKV+  K  +    +  E+DI+ 
Sbjct: 5   TRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 64

Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLD 294
              H N+V+L D++  +++  I+ E   GG +   +       TE  I    +Q L  L+
Sbjct: 65  SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 124

Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           Y+H   I H  L  G++L    G   + L DFG+S + T 
Sbjct: 125 YLHDNKIIHRDLKAGNILFTLDG--DIKLADFGVSAKNTR 162

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.9 bits (194), Expect = 2e-16
 Identities = 31/155 (20%), Positives = 52/155 (33%), Gaps = 7/155 (4%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGC----TQRVTKLGTLIHPINT 1010
             LD L YLH   + H +++  N++        +KL D G     T+ + +  + I     
Sbjct: 119  TLDALNYLHDNKIIHRDLKAGNILFTL--DGDIKLADFGVSAKNTRTIQRRDSFIGTPYW 176

Query: 1011 PNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
              PE    E   + P   + DVWS G+    +     P    +       +         
Sbjct: 177  MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLA 236

Query: 1071 LFKELTQEATRFLMLIFKHEVDW-ITLANNIDHEF 1104
                 +     FL    +  VD   T +  + H F
Sbjct: 237  QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 271

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 2e-10
 Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 9/126 (7%)

Query: 594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY-SHDTLHQVNTEFDNLRSLRH 652
           P D ++ I E+  G F  V KA  K  T  L AAK+ +  S + L     E D L S  H
Sbjct: 10  PEDFWEIIGELGDGAFGKVYKAQNK-ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 68

Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE-YTEQNVATIISQAWE--H 709
             I  LL+A+       N   +++E   G  V + +       TE  +  +  Q  +  +
Sbjct: 69  PNIVKLLDAF----YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 124

Query: 710 YLKKNR 715
           YL  N+
Sbjct: 125 YLHDNK 130

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 3e-10
 Identities = 15/96 (15%), Positives = 30/96 (31%), Gaps = 5/96 (5%)

Query: 1143 QAPEVLA-----EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1197
             APEV+      + P   + DVWS G+    +     P    +       +         
Sbjct: 177  MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLA 236

Query: 1198 LFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
                 +     FL    ++    R T  +  ++ ++
Sbjct: 237  QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 272

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 1e-09
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 463 PGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
            GG +   +       TE  I    +Q L  L+Y+H   I H  L  G++L    G   +
Sbjct: 92  AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG--DI 149

Query: 522 LLTDFGLSRRITSFGKLNPLEYGNGQY 548
            L DFG+S + T   +      G   +
Sbjct: 150 KLADFGVSAKNTRTIQRRDSFIGTPYW 176

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 5e-04
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 51 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          TR     D ++   ELG G  G VY A  + +    AAKV+
Sbjct: 5  TRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI 45

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  128 bits (323), Expect = 4e-33
 Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 2/174 (1%)

Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMN 235
           + + I D YDF D LG G    V  A ++ + +  A K +  K  +  +   +NE+ +++
Sbjct: 3   QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLH 62

Query: 236 QLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDY 295
           ++ H N+V L D YE+     +I +L  GGEL   +  + +YTE D +  I Q+L  + Y
Sbjct: 63  KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 122

Query: 296 MHRLSIAHLGLTPGDLLVAHPGGR-HLLLTDFGLSRRITSFGKLNPLEYDVRYV 348
           +H L I H  L P +LL         ++++DFGLS+       L+       YV
Sbjct: 123 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYV 176

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 77.4 bits (190), Expect = 9e-16
 Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 5/159 (3%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLGTLIHP 1007
            +  +  VLD ++YLH  G+ H +++P+N++  S+    ++ + D G ++       L   
Sbjct: 110  SRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 169

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
              TP   + APEVLA++P     D WS GV+AY+LL G  PF  +++ +  + +    Y 
Sbjct: 170  CGTP--GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 227

Query: 1068 FEY-LFKELTQEATRFLMLIFKHEVDW-ITLANNIDHEF 1104
            F+   + +++  A  F+  + + + +   T    + H +
Sbjct: 228  FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 266

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.1 bits (171), Expect = 3e-13
 Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 3/117 (2%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKEL 1202
            APEVLA++P     D WS GV+AY+LL G  PF  +++ +  + +    Y F+   + ++
Sbjct: 177  APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 236

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDE 1259
            +  A  F+  + ++ P KR T E+  ++ W+     + K   ++V    ++K+   +
Sbjct: 237  SDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVS--EQIKKNFAK 291

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.0 bits (163), Expect = 3e-12
 Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 7/117 (5%)

Query: 591 TEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF--EYSHDTLHQVNTEFDNLR 648
            E   D Y F   +  G FS V+ A +K  T+ LVA K    +        +  E   L 
Sbjct: 4   AEDIRDIYDFRDVLGTGAFSEVILAEDK-RTQKLVAIKCIAKKALEGKEGSMENEIAVLH 62

Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
            ++H  I +L + Y     +     L+M+ + G ++   +  +  YTE++ + +I Q
Sbjct: 63  KIKHPNIVALDDIY----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 115

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.0 bits (132), Expect = 2e-08
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HL 521
            GGEL   +  + +YTE D +  I Q+L  + Y+H L I H  L P +LL         +
Sbjct: 90  SGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKI 149

Query: 522 LLTDFGLSRRITSFGKLN 539
           +++DFGLS+       L+
Sbjct: 150 MISDFGLSKMEDPGSVLS 167

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          + + I D YDF D LG G    V  A ++ + +  A K +
Sbjct: 3  QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI 42

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  127 bits (320), Expect = 1e-32
 Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 5/156 (3%)

Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---TGKGNQYKSLFKNELDIMNQLC 238
              +    E+G G  G VY A +  +    A K M     + N+       E+  + +L 
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N ++    Y  + +  ++ E   G         +    E +IA      L GL Y+H 
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS 133

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            ++ H  +  G++L++ PG   + L DFG +  +  
Sbjct: 134 HNMIHRDVKAGNILLSEPG--LVKLGDFGSASIMAP 167

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 72.7 bits (178), Expect = 4e-14
 Identities = 31/154 (20%), Positives = 54/154 (35%), Gaps = 12/154 (7%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
             L GL YLH   + H +++  N++++      VKL D G    +    + +       P 
Sbjct: 124  ALQGLAYLHSHNMIHRDVKAGNILLSE--PGLVKLGDFGSASIMAPANSFVGT-----PY 176

Query: 1015 FAAPEVLA---EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL 1071
            + APEV+    E     + DVWS G+    L     P    +      ++          
Sbjct: 177  WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ- 235

Query: 1072 FKELTQEATRFLMLIFKHEV-DWITLANNIDHEF 1104
                ++    F+    +    D  T    + H F
Sbjct: 236  SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 63.9 bits (155), Expect = 3e-11
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            G         +    E +IA      L GL Y+H  ++ H  +  G++L++ PG   + 
Sbjct: 98  LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVK 155

Query: 523 LTDFGLSRRITS 534
           L DFG +  +  
Sbjct: 156 LGDFGSASIMAP 167

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.4 bits (146), Expect = 4e-10
 Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 11/133 (8%)

Query: 589 WSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY----SHDTLHQVNTEF 644
           +  + P   +  + EI  G F  V  A +      +VA K   Y    S++    +  E 
Sbjct: 8   FFKDDPEKLFSDLREIGHGSFGAVYFARDV-RNSEVVAIKKMSYSGKQSNEKWQDIIKEV 66

Query: 645 DNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIIS 704
             L+ LRH         Y       + A LVME   G+        +    E  +A +  
Sbjct: 67  RFLQKLRHPNTIQYRGCY----LREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH 122

Query: 705 QAWE--HYLKKNR 715
            A +   YL  + 
Sbjct: 123 GALQGLAYLHSHN 135

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.0 bits (145), Expect = 5e-10
 Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 11/128 (8%)

Query: 1144 APEVLA---EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1200
            APEV+    E     + DVWS G+    L     P    +      ++            
Sbjct: 179  APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ-SG 237

Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSDEY 1260
              ++    F+    ++ P  RPT E   ++R+       + +      + + ++   D  
Sbjct: 238  HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF-------VLRERPPTVIMDLIQRTKDAV 290

Query: 1261 HDLKNKQF 1268
             +L N Q+
Sbjct: 291  RELDNLQY 298

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (319), Expect = 1e-32
 Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 4/162 (2%)

Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNEL 231
           R + +   P    Y   +++G+G +G VY A++ ++G+  A + M  +    K L  NE+
Sbjct: 10  RSIVSVGDP-KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68

Query: 232 DIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLS 291
            +M +  + N+V   DSY   D   ++ E   GG L   +T      E  IA   R+ L 
Sbjct: 69  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQ 127

Query: 292 GLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT 333
            L+++H   + H  +   ++L+   G   + LTDFG   +IT
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQIT 167

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.9 bits (194), Expect = 2e-16
 Identities = 33/151 (21%), Positives = 66/151 (43%), Gaps = 4/151 (2%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
             L  L++LH   + H +I+ DN+++       VKL D G   ++T   +    +    P 
Sbjct: 125  CLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQSKRSTMVGT-PY 181

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE 1074
            + APEV+  +   P+ D+WS G++A  ++ G  P+  ++       +           ++
Sbjct: 182  WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEK 241

Query: 1075 LTQEATRFLMLIFKHEVDW-ITLANNIDHEF 1104
            L+     FL      +V+   +    + H+F
Sbjct: 242  LSAIFRDFLNRCLDMDVEKRGSAKELLQHQF 272

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 4e-12
 Identities = 19/90 (21%), Positives = 40/90 (44%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APEV+  +   P+ D+WS G++A  ++ G  P+  ++       +           ++L+
Sbjct: 184  APEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
                 FL         KR + +E  ++++L
Sbjct: 244  AIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (144), Expect = 6e-10
 Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 9/129 (6%)

Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT-LHQVNTEFDNLR 648
           S   P  KY    +I +G    V  A +   T   VA +            +  E   +R
Sbjct: 14  SVGDPKKKYTRFEKIGQGASGTVYTAMDV-ATGQEVAIRQMNLQQQPKKELIINEILVMR 72

Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE 708
             ++  I + L++Y       +   +VME L G   L+ + +     E  +A +  +  +
Sbjct: 73  ENKNPNIVNYLDSY----LVGDELWVVMEYLAGGS-LTDVVTETCMDEGQIAAVCRECLQ 127

Query: 709 --HYLKKNR 715
              +L  N+
Sbjct: 128 ALEFLHSNQ 136

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 9e-09
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
           G  L  +  ++   E  IA   R+ L  L+++H   + H  +   ++L+   G   + LT
Sbjct: 101 GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKLT 158

Query: 525 DFGLSRRITSFGKLNPLEYGNGQY 548
           DFG   +IT          G   +
Sbjct: 159 DFGFCAQITPEQSKRSTMVGTPYW 182

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (95), Expect = 8e-04
 Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 47 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          R + +   P    Y   +++G+G +G VY A++ ++G+  A + M
Sbjct: 10 RSIVSVGDP-KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM 53

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (318), Expect = 3e-32
 Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 4/155 (2%)

Query: 182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCHR 240
            D ++   ELG G  G+V+    + SG   A K++  +     ++    EL ++++    
Sbjct: 5   DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RL 299
            +V  + ++ +    +I  E   GG L   L +     E  +      ++ GL Y+  + 
Sbjct: 65  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            I H  + P ++LV   G   + L DFG+S ++  
Sbjct: 125 KIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLID 157

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.7 bits (183), Expect = 1e-14
 Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 6/149 (4%)

Query: 955  VLDGLQYLHWR-GLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP 1013
            V+ GL YL  +  + H +++P N+++ S    ++KL D G + ++         + T + 
Sbjct: 113  VIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLID-SMANSFVGTRS- 168

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
             + +PE L       Q+D+WS G+    +  G  P       E                 
Sbjct: 169  -YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227

Query: 1074 ELTQEATRFLMLIFKHEVDWITLANNIDH 1102
               +   R L          + +   +D+
Sbjct: 228  PRPRTPGRPLSSYGMDSRPPMAIFELLDY 256

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.5 bits (146), Expect = 4e-10
 Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 7/116 (6%)

Query: 592 EPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF--EYSHDTLHQVNTEFDNLRS 649
           E   D ++ ISE+  G   VV K + K  +  ++A KL   E      +Q+  E   L  
Sbjct: 2   ELKDDDFEKISELGAGNGGVVFKVSHK-PSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 650 LRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
                I     A+     +     + ME + G  +   L       EQ +  +   
Sbjct: 61  CNSPYIVGFYGAF----YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 112

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 9e-10
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMH-RLSIAHLGLTPGDLLVAHPGGRHL 521
            GG L   L +     E  +      ++ GL Y+  +  I H  + P ++LV   G   +
Sbjct: 87  DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EI 144

Query: 522 LLTDFGLSRRITS 534
            L DFG+S ++  
Sbjct: 145 KLCDFGVSGQLID 157

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 7e-07
 Identities = 15/131 (11%), Positives = 30/131 (22%), Gaps = 41/131 (31%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF---- 1199
            +PE L       Q+D+WS G+    +  G  P       E                    
Sbjct: 171  SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRP 230

Query: 1200 -------------------------------------KELTQEATRFLMLIFKRAPGKRP 1222
                                                    + E   F+     + P +R 
Sbjct: 231  RTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERA 290

Query: 1223 TVEECHENRWL 1233
             +++   + ++
Sbjct: 291  DLKQLMVHAFI 301

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 57 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
           D ++   ELG G  G+V+    + SG   A K++
Sbjct: 5  DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI 39

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (301), Expect = 1e-30
 Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 3/159 (1%)

Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-TGKGNQYKSLFKNELDIMNQLC 238
           P  + +D    LG G  G V  AV R +    A K++   +        K E+ I   L 
Sbjct: 2   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 61

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H N+V+ +      +   +  E   GGEL   +       E D   +  QL++G+ Y+H 
Sbjct: 62  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           + I H  + P +LL+      +L ++DFGL+       +
Sbjct: 122 IGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNR 158

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.7 bits (183), Expect = 4e-15
 Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 8/162 (4%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--N 1012
            ++ G+ YLH  G+ H +I+P+N+++       +K+ D G    V +       +N     
Sbjct: 112  LMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKISDFGLA-TVFRYNNRERLLNKMCGT 168

Query: 1013 PEFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL 1071
              + APE+L          DVWS G++   +L+G  P+   S+     +    +  +   
Sbjct: 169  LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP 228

Query: 1072 FKELTQEATRFLMLIFKHEV-DWITLANNIDHEFWHVKDLKR 1112
            +K++       L  I        IT+ +     +++ K LK+
Sbjct: 229  WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN-KPLKK 269

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 3e-11
 Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 9/127 (7%)

Query: 593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH--DTLHQVNTEFDNLRSL 650
           P  + +  +  +  G +  V  A  +  TE  VA K+ +     D    +  E    + L
Sbjct: 2   PFVEDWDLVQTLGEGAYGEVQLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60

Query: 651 RHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE-- 708
            HE +       +      NI  L +E   G ++   +       E +      Q     
Sbjct: 61  NHENVVKFYGHRRE----GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 116

Query: 709 HYLKKNR 715
            YL    
Sbjct: 117 VYLHGIG 123

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.2 bits (148), Expect = 1e-10
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 1/91 (1%)

Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APE+L          DVWS G++   +L+G  P+   S+     +    +  +   +K++
Sbjct: 173  APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 232

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
                   L  I    P  R T+ +  ++RW 
Sbjct: 233  DSAPLALLHKILVENPSARITIPDIKKDRWY 263

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 3e-08
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL   +       E D   +  QL++G+ Y+H + I H  + P +LL+      +L 
Sbjct: 86  SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLK 143

Query: 523 LTDFGLSRRITSFGK 537
           ++DFGL+       +
Sbjct: 144 ISDFGLATVFRYNNR 158

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 9e-05
 Identities = 14/52 (26%), Positives = 21/52 (40%)

Query: 55  PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVE 106
           P  + +D    LG G  G V  AV R +    A K++  K  +     +  E
Sbjct: 2   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKE 53

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 7e-30
 Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 8/180 (4%)

Query: 177 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM------TGKGNQYKSLFKNE 230
           R + + D YD G+ELG G   +V    E+S+G  YAAK +      + +    +   + E
Sbjct: 4   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 63

Query: 231 LDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLL 290
           + I+ ++ H N++ LH+ YE K    +I EL  GGEL   L  +   TE +   +++Q+L
Sbjct: 64  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 123

Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGR--HLLLTDFGLSRRITSFGKLNPLEYDVRYV 348
           +G+ Y+H L IAH  L P ++++         + + DFGL+ +I    +   +     +V
Sbjct: 124 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 183

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.8 bits (196), Expect = 1e-16
 Identities = 51/168 (30%), Positives = 92/168 (54%), Gaps = 6/168 (3%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMAS--VRSVQVKLIDLGCTQRVTKLGTLIH 1006
               +  +L+G+ YLH   + H +++P+N+++    V   ++K+ID G   ++       +
Sbjct: 116  TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 175

Query: 1007 PINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY 1066
               TP  EF APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y
Sbjct: 176  IFGTP--EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 233

Query: 1067 RF-EYLFKELTQEATRFLMLIFKHEV-DWITLANNIDHEFWHVKDLKR 1112
             F +  F   +  A  F+  +   +    +T+ +++ H +   KD ++
Sbjct: 234  EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 281

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.0 bits (181), Expect = 1e-14
 Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKEL 1202
            APE++  EP+  + D+WS GV+ Y+LLSGASPF G ++ ET  NV+ V Y F +  F   
Sbjct: 184  APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            +  A  F+  +  + P KR T+++  ++ W+
Sbjct: 244  SALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 2e-08
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 12/122 (9%)

Query: 589 WSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT-------LHQVN 641
           +  E   D Y    E+  G+F+VV K  EK +T    AAK  +               + 
Sbjct: 3   FRQENVDDYYDTGEELGSGQFAVVKKCREK-STGLQYAAKFIKKRRTKSSRRGVSREDIE 61

Query: 642 TEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVAT 701
            E   L+ ++H  + +L E Y          +L++E + G ++  +L+ +   TE+    
Sbjct: 62  REVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117

Query: 702 II 703
            +
Sbjct: 118 FL 119

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 3e-07
 Identities = 25/62 (40%), Positives = 33/62 (53%)

Query: 52  RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
           R + + D YD G+ELG G   +V    E+S+G  YAAK +  + T S    V  ED E E
Sbjct: 4   RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 63

Query: 112 YS 113
            S
Sbjct: 64  VS 65

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 1e-29
 Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 5/158 (3%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCH 239
           + + FG  LG G    V  A E ++ R YA K++  +             E D+M++L H
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
              V+L+ +++  +        A  GELL  + +   + E     Y  +++S L+Y+H  
Sbjct: 68  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
            I H  L P ++L+      H+ +TDFG ++ ++   K
Sbjct: 128 GIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESK 163

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.7 bits (183), Expect = 6e-15
 Identities = 28/137 (20%), Positives = 67/137 (48%), Gaps = 6/137 (4%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
             +    ++  L+YLH +G+ H +++P+N+++     + +++ D G  + ++         
Sbjct: 111  RFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQITDFGTAKVLSPESKQARAN 168

Query: 1009 N-TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
            +     ++ +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y 
Sbjct: 169  SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 228

Query: 1068 FEYLFKELTQEATRFLM 1084
            F    ++   +A   + 
Sbjct: 229  FP---EKFFPKARDLVE 242

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.5 bits (167), Expect = 7e-13
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 3/90 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            +PE+L E+     +D+W+ G + Y L++G  PFR  +E    Q +  + Y F    ++  
Sbjct: 178  SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP---EKFF 234

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
             +A   +  +      KR   EE      L
Sbjct: 235  PKARDLVEKLLVLDATKRLGCEEMEGYGPL 264

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 9/114 (7%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH----DTLHQVNTEFDNLRSLR 651
           + ++F   +  G FS VV A E   T    A K+ E  H    + +  V  E D +  L 
Sbjct: 8   EDFKFGKILGEGSFSTVVLAREL-ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 66

Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
           H     L   ++            +   +  ++L Y+     + E       ++
Sbjct: 67  HPFFVKLYFTFQDDEK----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 116

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 3e-08
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 2/86 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
             GELL  + +   + E     Y  +++S L+Y+H   I H  L P ++L+      H+ 
Sbjct: 91  KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM--HIQ 148

Query: 523 LTDFGLSRRITSFGKLNPLEYGNGQY 548
           +TDFG ++ ++   K        G  
Sbjct: 149 ITDFGTAKVLSPESKQARANSFVGTA 174

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 6e-04
 Identities = 14/53 (26%), Positives = 24/53 (45%)

Query: 58  DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNEN 110
           + + FG  LG G    V  A E ++ R YA K++  +  I  +   +V    +
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 60

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  117 bits (293), Expect = 2e-29
 Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 12/167 (7%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---------QYKSLFKNELDI 233
           + Y+  + LGRGV+ +V   + + + + YA K++   G          + +     E+DI
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62

Query: 234 MNQL-CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSG 292
           + ++  H N+++L D+YET   F ++ +L   GEL   LT +   +E +    +R LL  
Sbjct: 63  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 122

Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN 339
           +  +H+L+I H  L P ++L+      ++ LTDFG S ++    KL 
Sbjct: 123 ICALHKLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLR 167

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 79.3 bits (195), Expect = 2e-16
 Identities = 31/156 (19%), Positives = 64/156 (41%), Gaps = 8/156 (5%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN-- 1012
            +L+ +  LH   + H +++P+N+++     + +KL D G + ++     L     TP+  
Sbjct: 119  LLEVICALHKLNIVHRDLKPENILLDD--DMNIKLTDFGFSCQLDPGEKLREVCGTPSYL 176

Query: 1013 -PE-FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY 1070
             PE               + D+WS GV+ Y LL+G+ PF  + +    + +    Y+F  
Sbjct: 177  APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 236

Query: 1071 -LFKELTQEATRFLMLIFKHEVDW-ITLANNIDHEF 1104
              + + +      +      +     T    + H F
Sbjct: 237  PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 272

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 65.1 bits (158), Expect = 9e-12
 Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 8/144 (5%)

Query: 1093 WITLANNIDHEFWHVK--DLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAE 1150
             +   N +  +  ++K  D             + V G      P  +     +       
Sbjct: 135  DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII-----ECSMNDNH 189

Query: 1151 EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEY-LFKELTQEATRF 1209
                 + D+WS GV+ Y LL+G+ PF  + +    + +    Y+F    + + +      
Sbjct: 190  PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDL 249

Query: 1210 LMLIFKRAPGKRPTVEECHENRWL 1233
            +       P KR T EE   + + 
Sbjct: 250  VSRFLVVQPQKRYTAEEALAHPFF 273

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 62.0 bits (150), Expect = 9e-11
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
             GEL   LT +   +E +    +R LL  +  +H+L+I H  L P ++L+      ++ 
Sbjct: 93  KKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM--NIK 150

Query: 523 LTDFGLSRRITSFGKLN 539
           LTDFG S ++    KL 
Sbjct: 151 LTDFGFSCQLDPGEKLR 167

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 49.3 bits (117), Expect = 1e-06
 Identities = 29/133 (21%), Positives = 49/133 (36%), Gaps = 18/133 (13%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF----------EYSHDTLHQVNTEFD 645
           + Y+    + RG  SVV +   K  T    A K+           E   +       E D
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHK-PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 61

Query: 646 NLRSLR-HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIIS 704
            LR +  H  I  L + Y+ +T       LV + ++  ++  YL+ +   +E+    I+ 
Sbjct: 62  ILRKVSGHPNIIQLKDTYETNTF----FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 117

Query: 705 QAWE--HYLKKNR 715
              E    L K  
Sbjct: 118 ALLEVICALHKLN 130

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 41.2 bits (96), Expect = 5e-04
 Identities = 15/53 (28%), Positives = 26/53 (49%)

Query: 58  DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNEN 110
           + Y+  + LGRGV+ +V   + + + + YA K++   G  S S     E  E 
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 55

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  115 bits (289), Expect = 4e-28
 Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 8/158 (5%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---GNQYKSLFKNE---LDIMNQ 236
           + +     +GRG  G VY   +  +G+ YA K +  K     Q ++L  NE   L +++ 
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
                +V +  ++ T D  + I +L  GG+L + L++   ++E D+  Y  +++ GL++M
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 123

Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           H   + +  L P ++L+   G  H+ ++D GL+   + 
Sbjct: 124 HNRFVVYRDLKPANILLDEHG--HVRISDLGLACDFSK 159

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 66.3 bits (161), Expect = 7e-12
 Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 4/136 (2%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
             +    ++ GL+++H R + + +++P N+++       V++ DLG     +K     H  
Sbjct: 110  RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGLACDFSK--KKPHAS 165

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
               +   A   +          D +S G + + LL G SPFR     +  +         
Sbjct: 166  VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 225

Query: 1069 EYLFKELTQEATRFLM 1084
              L    + E    L 
Sbjct: 226  VELPDSFSPELRSLLE 241

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.8 bits (139), Expect = 4e-09
 Identities = 19/72 (26%), Positives = 41/72 (56%), Gaps = 2/72 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG+L + L++   ++E D+  Y  +++ GL++MH   + +  L P ++L+   G  H+ 
Sbjct: 90  NGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVR 147

Query: 523 LTDFGLSRRITS 534
           ++D GL+   + 
Sbjct: 148 ISDLGLACDFSK 159

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 55.9 bits (134), Expect = 2e-08
 Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 17/170 (10%)

Query: 1143 QAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE 1201
             APEVL +   +    D +S G + + LL G SPFR     +  +           L   
Sbjct: 172  MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS 231

Query: 1202 LTQEATRFLMLIFKRAPGKRPTV-----EECHENRWL--VPSEYMIKKRERAVFLGNRLK 1254
             + E    L  + +R   +R        +E  E+ +   +  + +  ++     +  R +
Sbjct: 232  FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGE 291

Query: 1255 EFSDEYHDLKN--KQFTS-----DSLSSLHK--TLTRSNSIQEELISTAF 1295
              + +  D+ +  ++ T      DS   L++   LT S   Q+E+  T F
Sbjct: 292  VNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVF 341

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.0 bits (116), Expect = 2e-06
 Identities = 18/129 (13%), Positives = 44/129 (34%), Gaps = 14/129 (10%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDN-------LR 648
           + +     I RG F  V    +  +T  + A K  +     + Q  T   N       + 
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKA-DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 62

Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE 708
           +     I  +  A+       +    +++ + G D+  +LS    ++E ++    ++   
Sbjct: 63  TGDCPFIVCMSYAF----HTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIIL 118

Query: 709 --HYLKKNR 715
              ++    
Sbjct: 119 GLEHMHNRF 127

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 38.9 bits (90), Expect = 0.003
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          + +     +GRG  G VY   +  +G+ YA K +
Sbjct: 4  NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL 37

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 2e-27
 Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 9/154 (5%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNL 242
             F  E+GRG    VY  ++  +    A   +  +      +  FK E +++  L H N+
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 70

Query: 243 VRLHDSYET----KDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           VR +DS+E+    K    +++EL   G L   L R        +  + RQ+L GL ++H 
Sbjct: 71  VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT 130

Query: 299 LS--IAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
            +  I H  L   ++ +  P G  + + D GL+ 
Sbjct: 131 RTPPIIHRDLKCDNIFITGPTG-SVKIGDLGLAT 163

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 2e-13
 Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 8/153 (5%)

Query: 955  VLDGLQYLHWRG--LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN 1012
            +L GLQ+LH R   + H +++ DN+ +    +  VK+ DLG    + +       I TP 
Sbjct: 121  ILKGLQFLHTRTPPIIHRDLKCDNIFITG-PTGSVKIGDLGLA-TLKRASFAKAVIGTP- 177

Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF 1072
             EF APE+  EE      DV++ G+    + +   P+                 +     
Sbjct: 178  -EFMAPEMY-EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFD 235

Query: 1073 KELTQEATRFLMLIFKHEV-DWITLANNIDHEF 1104
            K    E    +    +    +  ++ + ++H F
Sbjct: 236  KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 268

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 3e-10
 Identities = 12/90 (13%), Positives = 30/90 (33%), Gaps = 1/90 (1%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE+  EE      DV++ G+    + +   P+                 +     K   
Sbjct: 181  APEMY-EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAI 239

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
             E    +    ++   +R ++++   + + 
Sbjct: 240  PEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 1e-09
 Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 6/126 (4%)

Query: 598 YQFISEIHRGKFSVVVKAAEKANTENLVAAKLF---EYSHDTLHQVNTEFDNLRSLRHER 654
            +F  EI RG F  V K  +   T   VA       + +     +   E + L+ L+H  
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDT-ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 69

Query: 655 IASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ--AWEHYLK 712
           I    ++++ +       VLV E +    + +YL        + + +   Q      +L 
Sbjct: 70  IVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH 129

Query: 713 KNREQI 718
                I
Sbjct: 130 TRTPPI 135

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 7e-08
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS--IAHLGLTPGDLLVAHPGGRH 520
             G L   L R        +  + RQ+L GL ++H  +  I H  L   ++ +  P G  
Sbjct: 95  TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTG-S 153

Query: 521 LLLTDFGLSR 530
           + + D GL+ 
Sbjct: 154 VKIGDLGLAT 163

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (89), Expect = 0.004
 Identities = 8/32 (25%), Positives = 13/32 (40%)

Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
            F  E+GRG    VY  ++  +    A   +
Sbjct: 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCEL 42

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (269), Expect = 2e-26
 Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 10/164 (6%)

Query: 180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM------TGKGNQYKSLFKNELDI 233
           P+   Y  G  LG G  G VY  +  S     A K +              +    E+ +
Sbjct: 1   PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL 60

Query: 234 MNQL--CHRNLVRLHDSYETKDSFTIISELAGGGELLHS-LTRQSYYTEYDIAHYIRQLL 290
           + ++      ++RL D +E  DSF +I E     + L   +T +    E     +  Q+L
Sbjct: 61  LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 120

Query: 291 SGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             + + H   + H  +   ++L+    G  L L DFG    +  
Sbjct: 121 EAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSGALLKD 163

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 5e-12
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            VL+ +++ H  G+ H +I+ +N+++   R  ++KLID G    + K         T    
Sbjct: 119  VLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELKLIDFGSG-ALLKDTVYTDFDGTR--V 174

Query: 1015 FAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
            ++ PE +       +   VWS G+L Y ++ G  PF    E    Q
Sbjct: 175  YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 220

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.5 bits (133), Expect = 1e-08
 Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 10/91 (10%)

Query: 1144 APEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
             PE +       +   VWS G+L Y ++ G  PF    E    Q          +  + +
Sbjct: 177  PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQV---------FFRQRV 227

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            + E    +       P  RPT EE   + W+
Sbjct: 228  SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 7e-07
 Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
           P  +L   +T +    E     +  Q+L  + + H   + H  +   ++L+    G  L 
Sbjct: 93  PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG-ELK 151

Query: 523 LTDFGLSRRITS 534
           L DFG    +  
Sbjct: 152 LIDFGSGALLKD 163

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 2e-05
 Identities = 13/57 (22%), Positives = 17/57 (29%)

Query: 55  PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE 111
           P+   Y  G  LG G  G VY  +  S     A K +            +      E
Sbjct: 1   PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 57

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 7e-05
 Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 17/134 (12%)

Query: 593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH-------DTLHQVNTEFD 645
           P   +YQ    +  G F  V       +    VA K  E              +V  E  
Sbjct: 1   PLESQYQVGPLLGSGGFGSVYSGIRV-SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 59

Query: 646 NLRSLR--HERIASLLEAYKPSTTASNIAVLVMEKLQGA-DVLSYLSSRHEYTEQNVATI 702
            L+ +      +  LL+ ++      +  VL++E+ +   D+  +++ R    E+   + 
Sbjct: 60  LLKKVSSGFSGVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSF 115

Query: 703 ISQAWE--HYLKKN 714
             Q  E   +    
Sbjct: 116 FWQVLEAVRHCHNC 129

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 3e-26
 Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 14/184 (7%)

Query: 174 VKTRTKPITDAYDFGDE-LGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELD 232
           ++ +   I D Y    + LG G+ G V     + +   +A K++     Q     + E++
Sbjct: 2   LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVE 56

Query: 233 IMNQLC-HRNLVRLHDSYET----KDSFTIISELAGGGELLHSLTRQS--YYTEYDIAHY 285
           +  +     ++VR+ D YE     +    I+ E   GGEL   +  +    +TE + +  
Sbjct: 57  LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 116

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR-HLLLTDFGLSRRITSFGKLNPLEYD 344
           ++ +   + Y+H ++IAH  + P +LL         L LTDFG ++  TS   L    Y 
Sbjct: 117 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 176

Query: 345 VRYV 348
             YV
Sbjct: 177 PYYV 180

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.5 bits (185), Expect = 5e-15
 Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 9/163 (5%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHP 1007
            +  + S+ + +QYLH   + H +++P+N++  S R +  +KL D G  +  T   +L  P
Sbjct: 114  SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 173

Query: 1008 INTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE----PETRQNVNF 1063
              TP   + APEVL  E      D+WS GV+ Y+LL G  PF         P  +  +  
Sbjct: 174  CYTP--YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 231

Query: 1064 VRYRF-EYLFKELTQEATRFLMLIFKHEV-DWITLANNIDHEF 1104
             +Y F    + E+++E    +  + K E    +T+   ++H +
Sbjct: 232  GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 274

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.8 bits (152), Expect = 7e-11
 Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 8/128 (6%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE----PETRQNVNFVRYRF-EYL 1198
            APEVL  E      D+WS GV+ Y+LL G  PF         P  +  +   +Y F    
Sbjct: 181  APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 240

Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVPSEYMIKKRERAVFLGNRLKEFSD 1258
            + E+++E    +  + K  P +R T+ E   + W++ S    K  +  +     LKE  +
Sbjct: 241  WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS---TKVPQTPLHTSRVLKEDKE 297

Query: 1259 EYHDLKNK 1266
             + D+K +
Sbjct: 298  RWEDVKEE 305

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 2e-10
 Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 9/134 (6%)

Query: 587 IEWSTEPPTDKYQFISE-IHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFD 645
           ++       D Y+  S+ +  G    V++   K  T+   A K+ +       +V     
Sbjct: 2   LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNK-RTQEKFALKMLQDCPKARREVELH-- 58

Query: 646 NLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE--YTEQNVATII 703
             R+ +   I  +++ Y+         ++VME L G ++ S +  R +  +TE+  + I+
Sbjct: 59  -WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 117

Query: 704 SQAWE--HYLKKNR 715
               E   YL    
Sbjct: 118 KSIGEAIQYLHSIN 131

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (141), Expect = 2e-09
 Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 14/155 (9%)

Query: 463 PGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGR- 519
            GGEL   +  +    +TE + +  ++ +   + Y+H ++IAH  + P +LL        
Sbjct: 92  DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 151

Query: 520 HLLLTDFGLSRRITSFGKLN----------PLEYGNGQYKVAVTP-AMKHLQAITEAGHT 568
            L LTDFG ++  TS   L           P   G  +Y  +    ++  +  I   G+ 
Sbjct: 152 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 211

Query: 569 PTLAQDPPPLNYSVEDSPIEWSTEPPTDKYQFISE 603
           P  +     ++  ++        E P  ++  +SE
Sbjct: 212 PFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 246

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 3e-26
 Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 15/165 (9%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHR 240
           + Y+    +G G  G       +S G+    K +         K +  +E++++ +L H 
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63

Query: 241 NLVRLHDSY--ETKDSFTIISELAGGGELLHSLTRQS----YYTEYDIAHYIRQLLSGLD 294
           N+VR +D     T  +  I+ E   GG+L   +T+ +    Y  E  +   + QL   L 
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123

Query: 295 YMHRLS-----IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             HR S     + H  L P ++ +      ++ L DFGL+R +  
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLARILNH 166

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.6 bits (188), Expect = 9e-16
 Identities = 29/162 (17%), Positives = 60/162 (37%), Gaps = 11/162 (6%)

Query: 949  AYCVTSVLDGLQYLHWRG-----LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
               +T +   L+  H R      + H +++P NV +       VKL D G  + +    +
Sbjct: 112  LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG--KQNVKLGDFGLARILNHDTS 169

Query: 1004 LIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF 1063
                     P + +PE +       ++D+WS G L Y L +   PF   S+ E    +  
Sbjct: 170  FAKAFVGT-PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI-- 226

Query: 1064 VRYRFEYLFKELTQEATRFLMLIFKHEV-DWITLANNIDHEF 1104
               +F  +    + E    +  +   +     ++   +++  
Sbjct: 227  REGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 268

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 1e-12
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 2/90 (2%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            +PE +       ++D+WS G L Y L +   PF   S+ E    +     +F  +    +
Sbjct: 182  SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI--REGKFRRIPYRYS 239

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
             E    +  +       RP+VEE  EN  +
Sbjct: 240  DELNEIITRMLNLKDYHRPSVEEILENPLI 269

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (132), Expect = 2e-08
 Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 10/117 (8%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT---LHQVNTEFDNLRSLRH 652
           + Y+ +  I  G +    K   K +   ++  K  +Y   T      + +E + LR L+H
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRK-SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 62

Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLS----SRHEYTEQNVATIISQ 705
             I    +     T  +    +VME  +G D+ S ++     R    E+ V  +++Q
Sbjct: 63  PNIVRYYDRIIDRT--NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 117

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 7e-07
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 11/81 (13%)

Query: 463 PGGELLHSLTRQS----YYTEYDIAHYIRQLLSGLDYMHRLS-----IAHLGLTPGDLLV 513
            GG+L   +T+ +    Y  E  +   + QL   L   HR S     + H  L P ++ +
Sbjct: 88  EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 147

Query: 514 AHPGGRHLLLTDFGLSRRITS 534
                 ++ L DFGL+R +  
Sbjct: 148 DGKQ--NVKLGDFGLARILNH 166

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 7/34 (20%), Positives = 13/34 (38%)

Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          + Y+    +G G  G       +S G+    K +
Sbjct: 4  EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKEL 37

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 7e-26
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---TGKGNQYKSLFKNELDIMNQLCH 239
           + +D+   LG+G  G V    E+++GR YA K++           +    E  ++    H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
             L  L  +++T D    + E A GGEL   L+R+  +TE     Y  +++S L+Y+H  
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
            + +  +   +L++   G  H+ +TDFGL +   S G 
Sbjct: 125 DVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGA 160

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (164), Expect = 3e-12
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 6/130 (4%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            ++  L+YLH R + + +I+ +N+++       +K+ D G  +     G  +       PE
Sbjct: 114  IVSALEYLHSRDVVYRDIKLENLMLDK--DGHIKITDFGLCKEGISDGATMKTFCGT-PE 170

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE 1074
            + APEVL +       D W  GV+ Y ++ G  PF  Q      + +     RF    + 
Sbjct: 171  YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RT 227

Query: 1075 LTQEATRFLM 1084
            L+ EA   L 
Sbjct: 228  LSPEAKSLLA 237

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 9e-08
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL   L+R+  +TE     Y  +++S L+Y+H   + +  +   +L++   G  H+ 
Sbjct: 88  NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIK 145

Query: 523 LTDFGLSRRITSFGKLNPLEYGNGQY 548
           +TDFGL +   S G       G  +Y
Sbjct: 146 ITDFGLCKEGISDGATMKTFCGTPEY 171

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 3e-07
 Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 15/158 (9%)

Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
             APEVL +       D W  GV+ Y ++ G  PF  Q      + +     RF    + L
Sbjct: 172  LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTL 228

Query: 1203 TQEATRFLMLIFKRAPGKRP-----TVEECHENRWL--VPSEYMIKKRERAVFLGNRLKE 1255
            + EA   L  + K+ P +R        +E  E+R+   +  + +++K+    F      E
Sbjct: 229  SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSE 288

Query: 1256 -----FSDEYHDLKNKQFTSDSLSSLHKTLTRSNSIQE 1288
                 F DE+          D   SL          QE
Sbjct: 289  VDTRYFDDEFTAQSITITPPDRYDSLGLLELDQREEQE 326

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 4e-06
 Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 9/127 (7%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE----YSHDTLHQVNTEFDNLRSLR 651
           + + ++  + +G F  V+   EKA T    A K+       + D +    TE   L++ R
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKA-TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63

Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYL 711
           H  + +L  A+       +    VME   G ++  +LS    +TE+      ++      
Sbjct: 64  HPFLTALKYAF----QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 119

Query: 712 KKNREQI 718
             +   +
Sbjct: 120 YLHSRDV 126

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 0.001
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          + +D+   LG+G  G V    E+++GR YA K++
Sbjct: 5  NDFDYLKLLGKGTFGKVILVREKATGRYYAMKIL 38

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  107 bits (267), Expect = 1e-25
 Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 5/153 (3%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---TGKGNQYKSLFKNELDIMNQLCHRN 241
           +     LG G  G V+    R +GR YA KV+        +      +E  +++ + H  
Sbjct: 6   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 65

Query: 242 LVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           ++R+  +++      +I +   GGEL   L +   +       Y  ++   L+Y+H   I
Sbjct: 66  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 125

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            +  L P ++L+   G  H+ +TDFG ++ +  
Sbjct: 126 IYRDLKPENILLDKNG--HIKITDFGFAKYVPD 156

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 69.0 bits (168), Expect = 7e-13
 Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            V   L+YLH + + + +++P+N+++    +  +K+ D G  + V  +   +       P+
Sbjct: 113  VCLALEYLHSKDIIYRDLKPENILLDK--NGHIKITDFGFAKYVPDVTYTL----CGTPD 166

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE 1074
            + APEV++ +P     D WS G+L Y +L+G +PF   +  +T + +     RF      
Sbjct: 167  YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP---PF 223

Query: 1075 LTQEATRFLM 1084
              ++    L 
Sbjct: 224  FNEDVKDLLS 233

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.9 bits (134), Expect = 1e-08
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 8/95 (8%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APEV++ +P     D WS G+L Y +L+G +PF   +  +T + +     RF        
Sbjct: 169  APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP---PFFN 225

Query: 1204 QEATRFLMLIFKRAPGKR-----PTVEECHENRWL 1233
            ++    L  +  R   +R        E+   + W 
Sbjct: 226  EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 260

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.3 bits (117), Expect = 2e-06
 Identities = 17/126 (13%), Positives = 39/126 (30%), Gaps = 11/126 (8%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH----DTLHQVNTEFDNLRSLR 651
             +Q +  +  G F  V     + +     A K+ +         +   N E   L  + 
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSR-HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 62

Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ--AWEH 709
           H  I  +   +      +    ++M+ ++G ++ S L     +         ++      
Sbjct: 63  HPFIIRMWGTF----QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALE 118

Query: 710 YLKKNR 715
           YL    
Sbjct: 119 YLHSKD 124

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.9 bits (108), Expect = 2e-05
 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 457 NVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP 516
            + +   GGEL   L +   +       Y  ++   L+Y+H   I +  L P ++L+   
Sbjct: 81  MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKN 140

Query: 517 GGRHLLLTDFGLSRRITS 534
           G  H+ +TDFG ++ +  
Sbjct: 141 G--HIKITDFGFAKYVPD 156

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.7 bits (92), Expect = 0.002
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          +     LG G  G V+    R +GR YA KV+
Sbjct: 6  FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVL 37

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (263), Expect = 1e-25
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 5/151 (3%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVR 244
             F  ELG G  G+V +   R    + A K++  +G+  +  F  E  +M  L H  LV+
Sbjct: 6   LTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 63

Query: 245 LHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
           L+     +    II+E    G LL+ L   +  +    +    + +   ++Y+      H
Sbjct: 64  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 123

Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             L   + LV   G   + ++DFGLSR +  
Sbjct: 124 RDLAARNCLVNDQG--VVKVSDFGLSRYVLD 152

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.6 bits (149), Expect = 1e-10
 Identities = 30/146 (20%), Positives = 59/146 (40%), Gaps = 5/146 (3%)

Query: 919  GEPKPVIQWFKLGTSTLCYLPIVIP--TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDN 976
              P  +I  +      L YL  +     T +       V + ++YL  +   H ++   N
Sbjct: 71   QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 130

Query: 977  VVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAG 1036
             ++       VK+ D G ++ V          +     ++ PEVL       ++D+W+ G
Sbjct: 131  CLVND--QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 188

Query: 1037 VLAYVLLS-GASPFRGQSEPETRQNV 1061
            VL + + S G  P+   +  ET +++
Sbjct: 189  VLMWEIYSLGKMPYERFTNSETAEHI 214

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 2e-07
 Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 7/115 (6%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERI 655
               F+ E+  G+F VV     +   +  VA K+ +    +  +   E   + +L HE++
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL 61

Query: 656 ASLLEAYKPSTTASNIAVLVMEKLQGADVLSYL-SSRHEYTEQNVATIISQAWEH 709
             L        T      ++ E +    +L+YL   RH +  Q +  +     E 
Sbjct: 62  VQLYGVC----TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 112

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (118), Expect = 7e-07
 Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 3/88 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
             PEVL       ++D+W+ GVL + + S G  P+   +  ET +++   +    Y     
Sbjct: 169  PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI--AQGLRLYRPHLA 226

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHEN 1230
            +++    +   +     +RPT +    N
Sbjct: 227  SEKVYTIMYSCWHEKADERPTFKILLSN 254

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  106 bits (265), Expect = 1e-25
 Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 4/168 (2%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
           + + Y  G ++G G  G +Y   + ++G   A K+   K    +     E  I   +   
Sbjct: 5   VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ--LHIESKIYKMMQGG 62

Query: 241 NLVR-LHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
             +  +       D   ++ EL G             ++   +     Q++S ++Y+H  
Sbjct: 63  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 122

Query: 300 SIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSRRITSFGKLNPLEYDVR 346
           +  H  + P + L+     G  + + DFGL+++         + Y   
Sbjct: 123 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 170

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 71.0 bits (173), Expect = 1e-13
 Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 12/156 (7%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHP 1007
                  ++  ++Y+H +   H +++PDN +M   +    V +ID G  ++     T  H 
Sbjct: 106  LLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI 165

Query: 1008 INTPN------PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
                N        +A+           + D+ S G +      G+ P++G      RQ  
Sbjct: 166  PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 225

Query: 1062 -----NFVRYRFEYLFKELTQEATRFLMLIFKHEVD 1092
                   +    E L K    E   +L        D
Sbjct: 226  ERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFD 261

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.2 bits (132), Expect = 2e-08
 Identities = 21/149 (14%), Positives = 35/149 (23%), Gaps = 16/149 (10%)

Query: 1086 IFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
                      L   ID          R   +      KN+ G +              + 
Sbjct: 134  FLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR-----------YASI 182

Query: 1146 EVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV-----NFVRYRFEYLFK 1200
                      + D+ S G +      G+ P++G      RQ         +    E L K
Sbjct: 183  NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 242

Query: 1201 ELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
                E   +L          +P      +
Sbjct: 243  GYPSEFATYLNFCRSLRFDDKPDYSYLRQ 271

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.8 bits (118), Expect = 1e-06
 Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 1/82 (1%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHL 521
                         ++   +     Q++S ++Y+H  +  H  + P + L+     G  +
Sbjct: 86  GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 145

Query: 522 LLTDFGLSRRITSFGKLNPLEY 543
            + DFGL+++         + Y
Sbjct: 146 YIIDFGLAKKYRDARTHQHIPY 167

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.4 bits (109), Expect = 1e-05
 Identities = 19/122 (15%), Positives = 41/122 (33%), Gaps = 7/122 (5%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERI 655
           ++Y+   +I  G F  +    +       VA KL E       Q++ E    + ++    
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDI-AAGEEVAIKL-ECVKTKHPQLHIESKIYKMMQGGVG 64

Query: 656 ASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE--HYLKK 713
              +          +  V+VME L  +    +     +++ + V  +  Q      Y+  
Sbjct: 65  IPTIRWC---GAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121

Query: 714 NR 715
             
Sbjct: 122 KN 123

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.4 bits (96), Expect = 4e-04
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          + + Y  G ++G G  G +Y   + ++G   A K+ 
Sbjct: 5  VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLE 40

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (260), Expect = 4e-25
 Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 9/156 (5%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHR 240
                G  +G G  G VY         + A K++  T    Q    FKNE+ ++ +  H 
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           N++     Y T     I+++   G  L H L   ++ +    +    RQ   G+DY+H  
Sbjct: 65  NILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
           SI H  L   ++ +       + + DFGL+   + +
Sbjct: 124 SIIHRDLKSNNIFLHEDL--TVKIGDFGLATVKSRW 157

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 8e-14
 Identities = 28/146 (19%), Positives = 61/146 (41%), Gaps = 11/146 (7%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--N 1012
               G+ YLH + + H +++ +N+ +     + VK+ D G    V    +  H       +
Sbjct: 113  TAQGMDYLHAKSIIHRDLKSNNIFLHE--DLTVKIGDFGLA-TVKSRWSGSHQFEQLSGS 169

Query: 1013 PEFAAPEVL---AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV---NFVRY 1066
              + APEV+    + P   Q+DV++ G++ Y L++G  P+   +  +    +    ++  
Sbjct: 170  ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229

Query: 1067 RFEYLFKELTQEATRFLMLIFKHEVD 1092
                +     +   R +    K + D
Sbjct: 230  DLSKVRSNCPKAMKRLMAECLKKKRD 255

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 3e-08
 Identities = 17/90 (18%), Positives = 38/90 (42%), Gaps = 6/90 (6%)

Query: 1144 APEVL---AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV---NFVRYRFEY 1197
            APEV+    + P   Q+DV++ G++ Y L++G  P+   +  +    +    ++      
Sbjct: 174  APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSK 233

Query: 1198 LFKELTQEATRFLMLIFKRAPGKRPTVEEC 1227
            +     +   R +    K+   +RP   + 
Sbjct: 234  VRSNCPKAMKRLMAECLKKKRDERPLFPQI 263

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 1e-07
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 463 PGGELLHSL-TRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
            G  L H L   ++ +    +    RQ   G+DY+H  SI H  L   ++ +       +
Sbjct: 86  EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL--TV 143

Query: 522 LLTDFGLSRRITSF 535
            + DFGL+   + +
Sbjct: 144 KIGDFGLATVKSRW 157

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 24/122 (19%), Positives = 40/122 (32%), Gaps = 15/122 (12%)

Query: 588 EWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVN---TEF 644
           +W  E P  +      I  G F  V K     +    VA K+   +  T  Q+     E 
Sbjct: 2   DW--EIPDGQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEV 55

Query: 645 DNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE-YTEQNVATII 703
             LR  RH  I   +         +    +V +  +G+ +  +L      +    +  I 
Sbjct: 56  GVLRKTRHVNILLFMGYST-----APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA 110

Query: 704 SQ 705
            Q
Sbjct: 111 RQ 112

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (263), Expect = 4e-25
 Identities = 28/156 (17%), Positives = 66/156 (42%), Gaps = 6/156 (3%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM----TGKGNQYKSLFKNELDIMNQLC 238
           + +     LG+G  G V+ A  + + + +A K +        +  +     +  +     
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           H  L  +  +++TK++   + E   GG+L++ +     +       Y  +++ GL ++H 
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 121

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             I +  L   ++L+   G  H+ + DFG+ +    
Sbjct: 122 KGIVYRDLKLDNILLDKDG--HIKIADFGMCKENML 155

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.3 bits (174), Expect = 1e-13
 Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 25/163 (15%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            ++ GLQ+LH +G+ + +++ DN+++       +K+ D G  +         +       +
Sbjct: 112  IILGLQFLHSKGIVYRDLKLDNILLDK--DGHIKIADFGMCKENMLGDAKTNTFCGTP-D 168

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE 1074
            + APE+L  +      D WS GVL Y +L G SPF GQ E E   ++      +    + 
Sbjct: 169  YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP---RW 225

Query: 1075 LTQEATRFL--ML-------------IFKH----EVDWITLAN 1098
            L +EA   L  +              I +H    E++W  L  
Sbjct: 226  LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELER 268

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.0 bits (155), Expect = 3e-11
 Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 9/150 (6%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE+L  +      D WS GVL Y +L G SPF GQ E E   ++      +    + L 
Sbjct: 171  APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP---RWLE 227

Query: 1204 QEATRFLMLIFKRAPGKRPTVE-ECHENRWL--VPSEYMIKKRERAVFLGNRLKEFSDEY 1260
            +EA   L+ +F R P KR  V  +  ++     +  E + +K     F       F    
Sbjct: 228  KEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSN 287

Query: 1261 HDLKNKQFTSDSLSSLHKTLTRSNSIQEEL 1290
             D   K+F ++            NS+ + +
Sbjct: 288  FD---KEFLNEKPRLSFADRALINSMDQNM 314

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 3e-07
 Identities = 21/127 (16%), Positives = 40/127 (31%), Gaps = 12/127 (9%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE----YSHDTLHQVNTEFDNL-RSL 650
           + +     + +G F  V  A  K  T    A K  +       D +     E   L  + 
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 60

Query: 651 RHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE-- 708
            H  +  +   +            VME L G D++ ++ S H++         ++     
Sbjct: 61  EHPFLTHMFCTF----QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL 116

Query: 709 HYLKKNR 715
            +L    
Sbjct: 117 QFLHSKG 123

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 1e-06
 Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 2/86 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GG+L++ +     +       Y  +++ GL ++H   I +  L   ++L+   G  H+ 
Sbjct: 86  NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG--HIK 143

Query: 523 LTDFGLSRRITSFGKLNPLEYGNGQY 548
           + DFG+ +             G   Y
Sbjct: 144 IADFGMCKENMLGDAKTNTFCGTPDY 169

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 9e-04
 Identities = 8/34 (23%), Positives = 17/34 (50%)

Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          + +     LG+G  G V+ A  + + + +A K +
Sbjct: 2  EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKAL 35

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (259), Expect = 6e-25
 Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 7/154 (4%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
           +     + LG G  G V+           A K +  +G+     F  E ++M QL H+ L
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRL 70

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYY--TEYDIAHYIRQLLSGLDYMHRLS 300
           VRL+    T++   II+E    G L+  L   S    T   +     Q+  G+ ++   +
Sbjct: 71  VRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             H  L   ++LV+        + DFGL+R I  
Sbjct: 130 YIHRDLRAANILVSDTLSCK--IADFGLARLIED 161

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (156), Expect = 1e-11
 Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 3/108 (2%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            + +G+ ++  R   H ++   N++++       K+ D G  + +               +
Sbjct: 118  IAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEYTAREGAKFPIK 175

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
            + APE +       ++DVWS G+L   +++ G  P+ G + PE  QN+
Sbjct: 176  WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 3e-08
 Identities = 22/131 (16%), Positives = 52/131 (39%), Gaps = 13/131 (9%)

Query: 588 EWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNL 647
           EW  E P +  + +  +  G+F  V       +T+  VA K  +    +      E + +
Sbjct: 7   EW--EVPRETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFLAEANLM 62

Query: 648 RSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYL--SSRHEYTEQNVATIISQ 705
           + L+H+R+  L               ++ E ++   ++ +L   S  + T   +  + +Q
Sbjct: 63  KQLQHQRLVRLYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117

Query: 706 AWE--HYLKKN 714
             E   ++++ 
Sbjct: 118 IAEGMAFIEER 128

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (114), Expect = 3e-06
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 3/87 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APE +       ++DVWS G+L   +++ G  P+ G + PE  QN+   R          
Sbjct: 178  APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERGYRMVRPDNC 235

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHE 1229
             +E  + + L +K  P  RPT +    
Sbjct: 236  PEELYQLMRLCWKERPEDRPTFDYLRS 262

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 1e-05
 Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 463 PGGELLHSLTRQSYY--TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
             G L+  L   S    T   +     Q+  G+ ++   +  H  L   ++LV+      
Sbjct: 90  ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCK 149

Query: 521 LLLTDFGLSRRITS 534
             + DFGL+R I  
Sbjct: 150 --IADFGLARLIED 161

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 1e-24
 Identities = 42/165 (25%), Positives = 65/165 (39%), Gaps = 14/165 (8%)

Query: 179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC 238
           +P   +Y     +G G  G+VY A    SG   A K +     Q K     EL IM +L 
Sbjct: 16  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLD 71

Query: 239 HRNLVRLHDSYETKDSFT------IISELAGGG---ELLHSLTRQSYYTEYDIAHYIRQL 289
           H N+VRL   + +           ++ +           H    +       +  Y+ QL
Sbjct: 72  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131

Query: 290 LSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
              L Y+H   I H  + P +LL+  P    L L DFG ++++  
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVR 175

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (157), Expect = 2e-11
 Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 2/107 (1%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            +   L Y+H  G+CH +I+P N+++    +  +KL D G  +++ + G            
Sbjct: 131  LFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVR-GEPNVSYICSRYY 188

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
             A   +          DVWSAG +   LL G   F G S  +    +
Sbjct: 189  RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 2e-07
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 1/73 (1%)

Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
                  H    +       +  Y+ QL   L Y+H   I H  + P +LL+  P    L
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVL 162

Query: 522 LLTDFGLSRRITS 534
            L DFG ++++  
Sbjct: 163 KLCDFGSAKQLVR 175

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 3e-07
 Identities = 28/142 (19%), Positives = 45/142 (31%), Gaps = 11/142 (7%)

Query: 581 SVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQV 640
           +V  +P +    P    Y     I  G F VV +A    ++  LVA K            
Sbjct: 5   TVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLC-DSGELVAIKKVLQDKR---FK 60

Query: 641 NTEFDNLRSLRHERIASLLEAYKPSTTASNIA--VLVMEKLQG---ADVLSYLSSRHEYT 695
           N E   +R L H  I  L   +  S    +     LV++ +          Y  ++    
Sbjct: 61  NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120

Query: 696 EQNVATIISQAWE--HYLKKNR 715
              V   + Q +    Y+    
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFG 142

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (116), Expect = 2e-06
 Identities = 20/116 (17%), Positives = 32/116 (27%), Gaps = 26/116 (22%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV--------------- 1188
               +          DVWSAG +   LL G   F G S  +    +               
Sbjct: 191  PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250

Query: 1189 --NFVRYRF---------EYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
              N+  ++F         +        EA      + +  P  R T  E   + + 
Sbjct: 251  NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  103 bits (257), Expect = 1e-24
 Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 5/154 (3%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
                  +LG G  G VY  V +      A K +     + +  F  E  +M ++ H NL
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNL 75

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYY--TEYDIAHYIRQLLSGLDYMHRLS 300
           V+L      +  F II+E    G LL  L   +    +   + +   Q+ S ++Y+ + +
Sbjct: 76  VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 135

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             H  L   + LV       + + DFGLSR +T 
Sbjct: 136 FIHRDLAARNCLVGENH--LVKVADFGLSRLMTG 167

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.2 bits (140), Expect = 2e-09
 Identities = 26/141 (18%), Positives = 55/141 (39%), Gaps = 3/141 (2%)

Query: 950  YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN 1009
            Y  T +   ++YL  +   H ++   N ++    +  VK+ D G ++ +T      H   
Sbjct: 119  YMATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSRLMTGDTYTAHAGA 176

Query: 1010 TPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE 1069
                ++ APE LA      ++DVW+ GVL + + +         +      +    YR E
Sbjct: 177  KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 236

Query: 1070 YLFKELTQEATRFLMLIFKHE 1090
               +   ++    +   ++  
Sbjct: 237  R-PEGCPEKVYELMRACWQWN 256

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.6 bits (128), Expect = 5e-08
 Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 15/149 (10%)

Query: 572 AQDPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFE 631
           A DP   NY       +W  E          ++  G++  V +   K      VA K  +
Sbjct: 1   AMDPSSPNYD------KW--EMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLK 51

Query: 632 YSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYL--S 689
                + +   E   ++ ++H  +  LL       T      ++ E +   ++L YL   
Sbjct: 52  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----TREPPFYIITEFMTYGNLLDYLREC 107

Query: 690 SRHEYTEQNVATIISQAWEHYLKKNREQI 718
           +R E +   +  + +Q         ++  
Sbjct: 108 NRQEVSAVVLLYMATQISSAMEYLEKKNF 136

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.8 bits (113), Expect = 4e-06
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 1/86 (1%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE LA      ++DVW+ GVL + + +         +      +    YR E   +   
Sbjct: 184  APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCP 242

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHE 1229
            ++    +   ++  P  RP+  E H+
Sbjct: 243  EKVYELMRACWQWNPSDRPSFAEIHQ 268

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.5 bits (94), Expect = 8e-04
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 463 PGGELLHSLTRQSYY--TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
             G LL  L   +    +   + +   Q+ S ++Y+ + +  H  L   + LV       
Sbjct: 96  TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--L 153

Query: 521 LLLTDFGLSRRITS 534
           + + DFGLSR +T 
Sbjct: 154 VKVADFGLSRLMTG 167

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (89), Expect = 0.004
 Identities = 9/34 (26%), Positives = 12/34 (35%)

Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
                 +LG G  G VY  V +      A K +
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL 50

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  103 bits (257), Expect = 2e-24
 Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 7/157 (4%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAA----KVMTGKGNQYKSLFKNELDIMNQLC 238
                   +G G  G V     +  G+         + +G   + +  F +E  IM Q  
Sbjct: 26  SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 85

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELL-HSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
           H N++ L           II+E    G L          +T   +   +R + +G+ Y+ 
Sbjct: 86  HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 145

Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            ++  H  L   ++LV         ++DFGLSR +  
Sbjct: 146 DMNYVHRDLAARNILVNSNL--VCKVSDFGLSRFLED 180

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.2 bits (153), Expect = 4e-11
 Identities = 24/158 (15%), Positives = 58/158 (36%), Gaps = 8/158 (5%)

Query: 910  KLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVT-SVLDGLQYLHWRGLC 968
             LE           + ++ + G+            T      +   +  G++YL      
Sbjct: 91   HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 150

Query: 969  HLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN----PEFAAPEVLAEE 1024
            H ++   N+++ S  ++  K+ D G ++ +    +     +         + APE +   
Sbjct: 151  HRDLAARNILVNS--NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 208

Query: 1025 PIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
                 +DVWS G++ + ++S G  P+   +  +    +
Sbjct: 209  KFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 246

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.8 bits (113), Expect = 4e-06
 Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 463 PGGELL-HSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
             G L          +T   +   +R + +G+ Y+  ++  H  L   ++LV        
Sbjct: 110 ENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL--VC 167

Query: 522 LLTDFGLSRRITS 534
            ++DFGLSR +  
Sbjct: 168 KVSDFGLSRFLED 180

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.4 bits (112), Expect = 5e-06
 Identities = 15/87 (17%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APE +        +DVWS G++ + ++S G  P+   +  +    +    YR      + 
Sbjct: 201  APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE-QDYRLPPP-MDC 258

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHE 1229
                 + ++  +++    RP   +   
Sbjct: 259  PSALHQLMLDCWQKDRNHRPKFGQIVN 285

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  102 bits (254), Expect = 2e-24
 Identities = 30/154 (19%), Positives = 60/154 (38%), Gaps = 7/154 (4%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM---TGKGNQYKSLFKNELDIMNQL 237
           ++D Y+ G+ LG G    V+ A +    R+ A KV+     +   +   F+ E      L
Sbjct: 5   LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 64

Query: 238 CHRNLVRLHDSYETKDSFT----IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
            H  +V ++D+ E +        I+ E   G  L   +  +   T       I      L
Sbjct: 65  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 124

Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 327
           ++ H+  I H  + P +++++      ++     
Sbjct: 125 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 158

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 69.4 bits (169), Expect = 3e-13
 Identities = 24/131 (18%), Positives = 55/131 (41%), Gaps = 1/131 (0%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
                L + H  G+ H +++P N+++++  +V+V    +      +              +
Sbjct: 120  ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 179

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET-RQNVNFVRYRFEYLFK 1073
            + +PE    + +  ++DV+S G + Y +L+G  PF G S      Q+V           +
Sbjct: 180  YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 239

Query: 1074 ELTQEATRFLM 1084
             L+ +    ++
Sbjct: 240  GLSADLDAVVL 250

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 65.9 bits (160), Expect = 4e-12
 Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 7/127 (5%)

Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH----DTLHQVNTEFDNLRSL 650
           +D+Y+    +  G  S V  A +       VA K+             +   E  N  +L
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDL-RLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 64

Query: 651 RHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE-- 708
            H  I ++ +  +  T A  +  +VME + G  +   + +    T +    +I+ A +  
Sbjct: 65  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 124

Query: 709 HYLKKNR 715
           ++  +N 
Sbjct: 125 NFSHQNG 131

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 56.3 bits (135), Expect = 7e-09
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET-RQNVNFVRYRFEYLFKEL 1202
            +PE    + +  ++DV+S G + Y +L+G  PF G S      Q+V           + L
Sbjct: 182  SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 241

Query: 1203 TQEATRFLMLIFKRAPGKRP-TVEE 1226
            + +    ++    + P  R  T  E
Sbjct: 242  SADLDAVVLKALAKNPENRYQTAAE 266

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 43.2 bits (101), Expect = 1e-04
 Identities = 12/36 (33%), Positives = 20/36 (55%)

Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          ++D Y+ G+ LG G    V+ A +    R+ A KV+
Sbjct: 5  LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVL 40

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 39.3 bits (91), Expect = 0.002
 Identities = 9/65 (13%), Positives = 22/65 (33%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            G  L   +  +   T       I      L++ H+  I H  + P +++++      ++
Sbjct: 94  DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVM 153

Query: 523 LTDFG 527
                
Sbjct: 154 DFGIA 158

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (252), Expect = 5e-24
 Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 7/149 (4%)

Query: 190 ELGRGVTGIVYHAVER--SSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLCHRNLVRL 245
           ELG G  G V     +     +  A K++  + N    K     E ++M QL +  +VR+
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73

Query: 246 HDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLG 305
               E  +S+ ++ E+A  G L   L +  +  + +I   + Q+  G+ Y+   +  H  
Sbjct: 74  IGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 132

Query: 306 LTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           L   ++L+      +  ++DFGLS+ + +
Sbjct: 133 LAARNVLLVTQH--YAKISDFGLSKALRA 159

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 1e-11
 Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 5/116 (4%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
               V  V  G++YL      H ++   NV++ +      K+ D G ++ +          
Sbjct: 110  IELVHQVSMGMKYLEESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKAQ 167

Query: 1009 NTP--NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
                   ++ APE +       ++DVWS GVL +   S G  P+RG    E    +
Sbjct: 168  THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 223

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 9e-08
 Identities = 20/87 (22%), Positives = 30/87 (34%), Gaps = 3/87 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APE +       ++DVWS GVL +   S G  P+RG    E    +   +          
Sbjct: 178  APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML--EKGERMGCPAGC 235

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHE 1229
             +E    + L +      RP       
Sbjct: 236  PREMYDLMNLCWTYDVENRPGFAAVEL 262

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 2e-07
 Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
             G L   L +  +  + +I   + Q+  G+ Y+   +  H  L   ++L+      +  
Sbjct: 90  ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH--YAK 147

Query: 523 LTDFGLSRRITS 534
           ++DFGLS+ + +
Sbjct: 148 ISDFGLSKALRA 159

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 8e-24
 Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 9/155 (5%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
                   +G+G  G V     R  G   A K +  K +     F  E  +M QL H NL
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNL 62

Query: 243 VRLHDS-YETKDSFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRL 299
           V+L     E K    I++E    G L+  L  +  S      +  +   +   ++Y+   
Sbjct: 63  VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 122

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           +  H  L   ++LV+        ++DFGL++  +S
Sbjct: 123 NFVHRDLAARNVLVSEDN--VAKVSDFGLTKEASS 155

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (158), Expect = 6e-12
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 7/108 (6%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            V + ++YL      H ++   NV+++       K+ D G T+  +              +
Sbjct: 112  VCEAMEYLEGNNFVHRDLAARNVLVSE--DNVAKVSDFGLTKEASSTQDTGKL----PVK 165

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
            + APE L E+    ++DVWS G+L + + S G  P+      +    V
Sbjct: 166  WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV 213

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 7e-08
 Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 3/87 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APE L E+    ++DVWS G+L + + S G  P+      +    V    Y+ +      
Sbjct: 168  APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-GYKMD-APDGC 225

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHE 1229
                   +   +      RP+  +  E
Sbjct: 226  PPAVYEVMKNCWHLDAAMRPSFLQLRE 252

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 1e-07
 Identities = 25/128 (19%), Positives = 42/128 (32%), Gaps = 11/128 (8%)

Query: 592 EPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLR 651
                + + +  I +G+F  V+    + N    VA K  + +  T      E   +  LR
Sbjct: 3   ALNMKELKLLQTIGKGEFGDVMLGDYRGNK---VAVKCIK-NDATAQAFLAEASVMTQLR 58

Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE--YTEQNVATIISQAWE- 708
           H  +  LL              +V E +    ++ YL SR         +        E 
Sbjct: 59  HSNLVQLLGVI---VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 115

Query: 709 -HYLKKNR 715
             YL+ N 
Sbjct: 116 MEYLEGNN 123

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (104), Expect = 5e-05
 Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 4/74 (5%)

Query: 463 PGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
             G L+  L  +  S      +  +   +   ++Y+   +  H  L   ++LV+      
Sbjct: 84  AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN--V 141

Query: 521 LLLTDFGLSRRITS 534
             ++DFGL++  +S
Sbjct: 142 AKVSDFGLTKEASS 155

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (251), Expect = 9e-24
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 7/151 (4%)

Query: 189 DELGRGVTGIVYHAVERSSGRNYAAKVM-----TGKGNQYKSLFKNELDIMNQLCHRNLV 243
           D LG G    VY A ++++ +  A K +     +   +        E+ ++ +L H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
            L D++  K + +++ +       +         T   I  Y+   L GL+Y+H+  I H
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 123

Query: 304 LGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             L P +LL+   G   L L DFGL++   S
Sbjct: 124 RDLKPNNLLLDENG--VLKLADFGLAKSFGS 152

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 4e-12
 Identities = 29/176 (16%), Positives = 62/176 (35%), Gaps = 10/176 (5%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
             L GL+YLH   + H +++P+N+++    +  +KL D G  +         +        
Sbjct: 109  TLQGLEYLHQHWILHRDLKPNNLLLDE--NGVLKLADFGLAKSFGS-PNRAYTHQVVTRW 165

Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
            + APE+L    ++    D+W+ G +   LL       G S+ +    +            
Sbjct: 166  YRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQW 225

Query: 1074 ELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKR---ETNYTFRLSAKNVI 1126
                    ++       +    + +    +     DL +     N   R++A   +
Sbjct: 226  PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDL---LDLIQGLFLFNPCARITATQAL 278

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 3e-08
 Identities = 17/116 (14%), Positives = 36/116 (31%), Gaps = 26/116 (22%)

Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV-------------- 1188
            APE+L    ++    D+W+ G +   LL       G S+ +    +              
Sbjct: 168  APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPD 227

Query: 1189 -----------NFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
                       +F      ++F     +    +  +F   P  R T  +  + ++ 
Sbjct: 228  MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 283

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
                +         T   I  Y+   L GL+Y+H+  I H  L P +LL+   G   L 
Sbjct: 83  ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG--VLK 140

Query: 523 LTDFGLSRRITS 534
           L DFGL++   S
Sbjct: 141 LADFGLAKSFGS 152

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 1e-23
 Identities = 31/153 (20%), Positives = 62/153 (40%), Gaps = 5/153 (3%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
               F  E+G G  G+V+     +     A K +  +G   +  F  E ++M +L H  L
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKL 62

Query: 243 VRLHDSYETKDSFTIISELAGGGELL-HSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSI 301
           V+L+     +    ++ E    G L  +  T++  +    +      +  G+ Y+    +
Sbjct: 63  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 122

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            H  L   + LV       + ++DFG++R +  
Sbjct: 123 IHRDLAARNCLVGENQ--VIKVSDFGMTRFVLD 153

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.6 bits (154), Expect = 3e-11
 Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 3/108 (2%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            V +G+ YL    + H ++   N ++    +  +K+ D G T+ V               +
Sbjct: 110  VCEGMAYLEEACVIHRDLAARNCLVGE--NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 167

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
            +A+PEV +      ++DVWS GVL + + S G  P+  +S  E  +++
Sbjct: 168  WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (116), Expect = 1e-06
 Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 6/110 (5%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERI 655
            +  F+ EI  G+F +V         +  VA K       +      E + +  L H ++
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIREGAMSEEDFIEEAEVMMKLSHPKL 62

Query: 656 ASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQ 705
             L               LV E ++   +  YL ++           +  
Sbjct: 63  VQLYGVC----LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 108

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 5e-06
 Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 3/87 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF-KEL 1202
            +PEV +      ++DVWS GVL + + S              + V  +   F     +  
Sbjct: 170  SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFRLYKPRLA 227

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHE 1229
            +    + +   +K  P  RP       
Sbjct: 228  STHVYQIMNHCWKERPEDRPAFSRLLR 254

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 1e-23
 Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 10/160 (6%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQLCH 239
           +   Y     +G G  G+V  A +  +    A K ++   +Q Y      E+ I+ +  H
Sbjct: 6   VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 65

Query: 240 RNLVRLHD-----SYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
            N++ ++D     + E      +++ L G     + L +  + +   I +++ Q+L GL 
Sbjct: 66  ENIIGINDIIRAPTIEQMKDVYLVTHLMGADL--YKLLKTQHLSNDHICYFLYQILRGLK 123

Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           Y+H  ++ H  L P +LL+       L + DFGL+R    
Sbjct: 124 YIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADP 161

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 6e-13
 Identities = 34/186 (18%), Positives = 73/186 (39%), Gaps = 12/186 (6%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
             Y +  +L GL+Y+H   + H +++P N+++ +  +  +K+ D G  +           +
Sbjct: 112  CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLARVADPDHDHTGFL 169

Query: 1009 NT--PNPEFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVR 1065
                    + APE++     +    D+WS G +   +LS    F G+   +   ++  + 
Sbjct: 170  TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 229

Query: 1066 YRF---EYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKR--ETNYTFRL 1120
                  +       +     L L  K++V W  L  N D +   +  L +    N   R+
Sbjct: 230  GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL--LDKMLTFNPHKRI 287

Query: 1121 SAKNVI 1126
              +  +
Sbjct: 288  EVEQAL 293

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 1e-08
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 4/111 (3%)

Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT--LHQVNTEFDNLRSLRH 652
             +Y  +S I  G + +V  A +    +  VA K            +   E   L   RH
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNV-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRH 65

Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATII 703
           E I  + +  +  T      V ++  L GAD+   L ++H  +  ++   +
Sbjct: 66  ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH-LSNDHICYFL 115

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 1e-07
 Identities = 27/153 (17%), Positives = 50/153 (32%), Gaps = 34/153 (22%)

Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV-------------- 1188
            APE++     +    D+WS G +   +LS    F G+   +   ++              
Sbjct: 180  APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 239

Query: 1189 --------------NFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLV 1234
                          +  +  +  LF     +A   L  +    P KR  VE+   + +L 
Sbjct: 240  IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL- 298

Query: 1235 PSEYMIKKRERAVFLGNRLKEFSDEYHDLKNKQ 1267
              +Y     E    +     +F  E  DL  ++
Sbjct: 299  -EQYYDPSDEP---IAEAPFKFDMELDDLPKEK 327

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 4e-05
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
           G  L+ L +  + +   I +++ Q+L GL Y+H  ++ H  L P +LL+       L + 
Sbjct: 94  GADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKIC 151

Query: 525 DFGLSRRITS 534
           DFGL+R    
Sbjct: 152 DFGLARVADP 161

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 0.001
 Identities = 8/36 (22%), Positives = 14/36 (38%)

Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          +   Y     +G G  G+V  A +  +    A K +
Sbjct: 6  VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI 41

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  101 bits (252), Expect = 1e-23
 Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 10/155 (6%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRN 241
           D Y    +LGRG    V+ A+  ++      K++       K   K E+ I+  L    N
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK---PVKKKKIKREIKILENLRGGPN 91

Query: 242 LVRLHDSYETKDSFTI--ISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           ++ L D  +   S T   + E     +           T+YDI  Y+ ++L  LDY H +
Sbjct: 92  IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM 148

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            I H  + P ++++ H     L L D+GL+     
Sbjct: 149 GIMHRDVKPHNVMIDHEHR-KLRLIDWGLAEFYHP 182

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 57.9 bits (139), Expect = 3e-09
 Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 10/146 (6%)

Query: 576 PPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD 635
           P   +  E   +EW  +   D YQ + ++ RGK+S V +A         V  K+      
Sbjct: 18  PREYWDYESHVVEWGNQ---DDYQLVRKLGRGKYSEVFEAINI-TNNEKVVVKIL--KPV 71

Query: 636 TLHQVNTEFDNLRSLR-HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEY 694
              ++  E   L +LR    I +L +  K     S    LV E +   D      +  +Y
Sbjct: 72  KKKKIKREIKILENLRGGPNIITLADIVKDPV--SRTPALVFEHVNNTDFKQLYQTLTDY 129

Query: 695 TEQNVATIISQAWEHYLKKNREQIAD 720
             +     I +A + Y         D
Sbjct: 130 DIRFYMYEILKALD-YCHSMGIMHRD 154

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 52.5 bits (125), Expect = 2e-07
 Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 8/141 (5%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            +L  L Y H  G+ H +++P NV++      +++LID G  +           + +    
Sbjct: 138  ILKALDYCHSMGIMHRDVKPHNVMIDH-EHRKLRLIDWGLAEFYHPGQEYNVRVAS--RY 194

Query: 1015 FAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETR----QNVNFVRYRFE 1069
            F  PE+L +  ++    D+WS G +   ++    PF    +   +      V      ++
Sbjct: 195  FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 254

Query: 1070 YLFKELTQEATRFLMLIFKHE 1090
            Y+ K   +   RF  ++ +H 
Sbjct: 255  YIDKYNIELDPRFNDILGRHS 275

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 46.0 bits (108), Expect = 2e-05
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 4/72 (5%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
              +           T+YDI  Y+ ++L  LDY H + I H  + P ++++ H     L 
Sbjct: 115 NNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-KLR 170

Query: 523 LTDFGLSRRITS 534
           L D+GL+     
Sbjct: 171 LIDWGLAEFYHP 182

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 40.2 bits (93), Expect = 0.001
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          D Y    +LGRG    V+ A+  ++      K++
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL 68

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =   99 bits (248), Expect = 1e-23
 Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 5/154 (3%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHR 240
           + Y   +++G G  G+VY A + + G  +A K +    +     S    E+ I+ +L H 
Sbjct: 2   EKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60

Query: 241 NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS 300
           N+V+L+D   TK    ++ E             +          ++ QLL+G+ Y H   
Sbjct: 61  NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120

Query: 301 IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           + H  L P +LL+   G   L + DFGL+R    
Sbjct: 121 VLHRDLKPQNLLINREG--ELKIADFGLARAFGI 152

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 65.3 bits (158), Expect = 8e-12
 Identities = 31/182 (17%), Positives = 70/182 (38%), Gaps = 9/182 (4%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
               +  +L+G+ Y H R + H +++P N+++      ++K+ D G  +            
Sbjct: 103  KSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR--EGELKIADFGLARAFGIPVRKYTHE 160

Query: 1009 NTPNPEFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
                  + AP+VL     +    D+WS G +   +++G   F G SE +    +  +   
Sbjct: 161  -IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGT 219

Query: 1068 F-EYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKR--ETNYTFRLSAKN 1124
                 +  +T+             + W +    +D     +  L +  + +   R++AK 
Sbjct: 220  PNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDL--LSKMLKLDPNQRITAKQ 277

Query: 1125 VI 1126
             +
Sbjct: 278  AL 279

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 53.0 bits (126), Expect = 8e-08
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 27/117 (23%)

Query: 1144 APEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV-------------- 1188
            AP+VL     +    D+WS G +   +++G   F G SE +    +              
Sbjct: 168  APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227

Query: 1189 ------------NFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
                         +    +E   K L +     L  + K  P +R T ++  E+ + 
Sbjct: 228  VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 51.0 bits (121), Expect = 4e-07
 Identities = 25/125 (20%), Positives = 36/125 (28%), Gaps = 11/125 (8%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT---LHQVNTEFDNLRSLRH 652
           +KY  + +I  G + VV KA  + N     A K      +          E   L+ L+H
Sbjct: 2   EKYHGLEKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59

Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE--HY 710
             I  L +            VLV E L                     + + Q      Y
Sbjct: 60  SNIVKLYDVIHTKKR----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115

Query: 711 LKKNR 715
               R
Sbjct: 116 CHDRR 120

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 45.3 bits (106), Expect = 2e-05
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 2/72 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
                      +          ++ QLL+G+ Y H   + H  L P +LL+   G   L 
Sbjct: 83  DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG--ELK 140

Query: 523 LTDFGLSRRITS 534
           + DFGL+R    
Sbjct: 141 IADFGLARAFGI 152

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 2e-23
 Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 12/160 (7%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHRNL 242
           Y+   ++G+G  G V+ A  R +G+  A K +    +   +      E+ I+  L H N+
Sbjct: 12  YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 71

Query: 243 VRLHDSYETKDSFT--------IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
           V L +   TK S          ++ +                +T  +I   ++ LL+GL 
Sbjct: 72  VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 131

Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           Y+HR  I H  +   ++L+   G   L L DFGL+R  + 
Sbjct: 132 YIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSL 169

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.5 bits (143), Expect = 8e-10
 Identities = 33/210 (15%), Positives = 76/210 (36%), Gaps = 10/210 (4%)

Query: 924  VIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR 983
            V  + +   + L    +V  T  +    +  +L+GL Y+H   + H +++  NV++   R
Sbjct: 95   VFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT--R 152

Query: 984  SVQVKLIDLGCTQRVTKLGTLIHPINTPN---PEFAAPEVLAEEPIF-PQTDVWSAGVLA 1039
               +KL D G  +  +          T       +  PE+L  E  + P  D+W AG + 
Sbjct: 153  DGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM 212

Query: 1040 YVLLSGASPFRGQSEPETRQNVNFVRYRF-EYLFKELTQEATRFLMLIFKHEVDWITLAN 1098
              + + +   +G +E      ++ +       ++  +        + + K +   +    
Sbjct: 213  AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRL 272

Query: 1099 NIDHEFWHVKDLKR---ETNYTFRLSAKNV 1125
                   +  DL       +   R+ + + 
Sbjct: 273  KAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (120), Expect = 6e-07
 Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 8/122 (6%)

Query: 594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT---LHQVNTEFDNLRSL 650
              KY+ +++I +G F  V KA  +  T   VA K     ++          E   L+ L
Sbjct: 8   EVSKYEKLAKIGQGTFGEVFKARHR-KTGQKVALKKVLMENEKEGFPITALREIKILQLL 66

Query: 651 RHERIASLLEAYKPSTTASNIA----VLVMEKLQGADVLSYLSSRHEYTEQNVATIISQA 706
           +HE + +L+E  +   +  N       LV +  +        +   ++T   +  ++   
Sbjct: 67  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 126

Query: 707 WE 708
             
Sbjct: 127 LN 128

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 1e-06
 Identities = 26/108 (24%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
                         +T  +I   ++ LL+GL Y+HR  I H  +   ++L+   G   L 
Sbjct: 100 EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLK 157

Query: 523 LTDFGLSRRITSFGKLNPLEYGNGQYKVAVTPA-MKHLQAITEAGHTP 569
           L DFGL+R       L      N      VT         + E  + P
Sbjct: 158 LADFGLARAF----SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGP 201

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 0.001
 Identities = 14/126 (11%), Positives = 34/126 (26%), Gaps = 33/126 (26%)

Query: 1145 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF--------- 1195
              +L E    P  D+W AG +   + + +   +G +E      ++ +             
Sbjct: 191  ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 250

Query: 1196 --------------------EYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL-- 1233
                                          A   +  +    P +R   ++   + +   
Sbjct: 251  NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 310

Query: 1234 --VPSE 1237
              +PS+
Sbjct: 311  DPMPSD 316

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 0.003
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          Y+   ++G+G  G V+ A  R +G+  A K +
Sbjct: 12 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKV 43

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.8 bits (248), Expect = 2e-23
 Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 8/158 (5%)

Query: 182 TDAYDFGD-ELGRGVTGIVYHAVERSSGRN--YAAKVMT-GKGNQYKSLFKNELDIMNQL 237
            D     D ELG G  G V   V R   +    A KV+  G           E  IM+QL
Sbjct: 7   RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL 66

Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYM 296
            +  +VRL    +  ++  ++ E+AGGG L   L  +       ++A  + Q+  G+ Y+
Sbjct: 67  DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 125

Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
              +  H  L   ++L+ +    +  ++DFGLS+ + +
Sbjct: 126 EEKNFVHRDLAARNVLLVNRH--YAKISDFGLSKALGA 161

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.1 bits (163), Expect = 2e-12
 Identities = 30/170 (17%), Positives = 65/170 (38%), Gaps = 22/170 (12%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP--N 1012
            V  G++YL  +   H ++   NV++ +      K+ D G ++ +    +     +     
Sbjct: 118  VSMGMKYLEEKNFVHRDLAARNVLLVN--RHYAKISDFGLSKALGADDSYYTARSAGKWP 175

Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYL 1071
             ++ APE +       ++DVWS GV  +  LS G  P++    PE    +   + +    
Sbjct: 176  LKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI--EQGKRMEC 233

Query: 1072 FKELTQEATRFLMLIFKHEVD---------------WITLANNIDHEFWH 1106
              E   E    +   + ++ +               + +LA+ ++    H
Sbjct: 234  PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHHHH 283

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 3e-07
 Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 3/87 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APE +       ++DVWS GV  +  LS G  P++    PE    +   + +      E 
Sbjct: 180  APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI--EQGKRMECPPEC 237

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHE 1229
              E    +   +      RP      +
Sbjct: 238  PPELYALMSDCWIYKWEDRPDFLTVEQ 264

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (121), Expect = 4e-07
 Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 463 PGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
            GG L   L  +       ++A  + Q+  G+ Y+   +  H  L   ++L+ +    + 
Sbjct: 91  GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH--YA 148

Query: 522 LLTDFGLSRRITS 534
            ++DFGLS+ + +
Sbjct: 149 KISDFGLSKALGA 161

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  101 bits (251), Expect = 2e-23
 Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 5/174 (2%)

Query: 164 SYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK---G 220
           +   + +  +  ++     D +D    LG G  G V     + SG +YA K++  +    
Sbjct: 22  AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81

Query: 221 NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEY 280
            +      NE  I+  +    LV+L  S++   +  ++ E   GGE+   L R   ++E 
Sbjct: 82  LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141

Query: 281 DIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
               Y  Q++   +Y+H L + +  L P +LL+   G  ++ +TDFG ++R+  
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRVKG 193

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 64.4 bits (156), Expect = 3e-11
 Identities = 27/130 (20%), Positives = 56/130 (43%), Gaps = 9/130 (6%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            ++   +YLH   L + +++P+N+++   +   +++ D G  +RV      +       PE
Sbjct: 150  IVLTFEYLHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGRTWTLCG----TPE 203

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE 1074
              APE++  +      D W+ GVL Y + +G  PF      +  + +   + RF      
Sbjct: 204  ALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF---PSH 260

Query: 1075 LTQEATRFLM 1084
             + +    L 
Sbjct: 261  FSSDLKDLLR 270

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.9 bits (126), Expect = 1e-07
 Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 8/94 (8%)

Query: 1145 PEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQ 1204
            PE++  +      D W+ GVL Y + +G  PF      +  + +   + RF       + 
Sbjct: 207  PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF---PSHFSS 263

Query: 1205 EATRFLMLIFKRAPGKR-----PTVEECHENRWL 1233
            +    L  + +    KR       V +   ++W 
Sbjct: 264  DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.7 bits (123), Expect = 3e-07
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 454 WEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLV 513
               V     GGE+   L R   ++E     Y  Q++   +Y+H L + +  L P +LL+
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174

Query: 514 AHPGGRHLLLTDFGLSRRITS 534
              G  ++ +TDFG ++R+  
Sbjct: 175 DQQG--YIQVTDFGFAKRVKG 193

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.8 bits (105), Expect = 4e-05
 Identities = 28/148 (18%), Positives = 54/148 (36%), Gaps = 15/148 (10%)

Query: 578 LNYSVEDSPIEWSTEPPT----DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS 633
           L  + ED   +W T        D++  I  +  G F  V+    K  + N  A K+ +  
Sbjct: 19  LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK-ESGNHYAMKILDKQ 77

Query: 634 H----DTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLS 689
                  +     E   L+++    +  L  ++K ++        VME + G ++ S+L 
Sbjct: 78  KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM----VMEYVAGGEMFSHLR 133

Query: 690 SRHEYTEQNVATIISQAWE--HYLKKNR 715
               ++E +     +Q      YL    
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLD 161

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.6 bits (94), Expect = 0.001
 Identities = 12/53 (22%), Positives = 23/53 (43%)

Query: 39 SYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          +   + +  +  ++     D +D    LG G  G V     + SG +YA K++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.5 bits (247), Expect = 5e-23
 Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 32/182 (17%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRN-----YAAKVMTGKGNQ-YKSLFKNELDIMNQ 236
           +  +FG  LG G  G V +A      +       A K++  K +   +    +EL +M Q
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 237 LC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQ--------------------- 274
           L  H N+V L  +        +I E    G+LL+ L  +                     
Sbjct: 97  LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156

Query: 275 --SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
             +  T  D+  +  Q+  G++++   S  H  L   ++LV H     + + DFGL+R I
Sbjct: 157 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK--VVKICDFGLARDI 214

Query: 333 TS 334
            S
Sbjct: 215 MS 216

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.6 bits (154), Expect = 4e-11
 Identities = 29/138 (21%), Positives = 59/138 (42%), Gaps = 5/138 (3%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP-NP 1013
            V  G+++L ++   H ++   NV++       VK+ D G  + +      +   N     
Sbjct: 173  VAKGMEFLEFKSCVHRDLAARNVLVTH--GKVVKICDFGLARDIMSDSNYVVRGNARLPV 230

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLF 1072
            ++ APE L E     ++DVWS G+L + + S G +P+ G         +    ++ +  F
Sbjct: 231  KWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPF 290

Query: 1073 KELTQEATRFLMLIFKHE 1090
               T+E    +   +  +
Sbjct: 291  Y-ATEEIYIIMQSCWAFD 307

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 6e-07
 Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 16/127 (12%)

Query: 1104 FWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAG 1163
            F   +D+  ++NY  R +A+  + W               APE L E     ++DVWS G
Sbjct: 208  FGLARDIMSDSNYVVRGNARLPVKW--------------MAPESLFEGIYTIKSDVWSYG 253

Query: 1164 VLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRP 1222
            +L + + S G +P+ G         +    ++ +  F   T+E    +   +     KRP
Sbjct: 254  ILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFY-ATEEIYIIMQSCWAFDSRKRP 312

Query: 1223 TVEECHE 1229
            +      
Sbjct: 313  SFPNLTS 319

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 1e-06
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 2/74 (2%)

Query: 461 RGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
                + L      +  T  D+  +  Q+  G++++   S  H  L   ++LV H     
Sbjct: 145 EYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK--V 202

Query: 521 LLLTDFGLSRRITS 534
           + + DFGL+R I S
Sbjct: 203 VKICDFGLARDIMS 216

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 4e-06
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 18/127 (14%)

Query: 574 DPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTEN----LVAAKL 629
           D     Y      ++W  E P +  +F   +  G F  V+ A     ++      VA K+
Sbjct: 22  DFREYEY-----DLKW--EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKM 74

Query: 630 FEYSHDT--LHQVNTEFDNLRSL-RHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLS 686
            +   D+     + +E   +  L  HE I +LL A     T S    L+ E     D+L+
Sbjct: 75  LKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC----TLSGPIYLIFEYCCYGDLLN 130

Query: 687 YLSSRHE 693
           YL S+ E
Sbjct: 131 YLRSKRE 137

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.5 bits (244), Expect = 6e-23
 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 4/155 (2%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNL 242
           Y+  +++G G  G V+ A  R +    A K +    +     S    E+ ++ +L H+N+
Sbjct: 4   YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIA 302
           VRLHD   +    T++ E        +  +         +  ++ QLL GL + H  ++ 
Sbjct: 64  VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVL 123

Query: 303 HLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           H  L P +LL+   G   L L +FGL+R      +
Sbjct: 124 HRDLKPQNLLINRNG--ELKLANFGLARAFGIPVR 156

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (150), Expect = 8e-11
 Identities = 29/176 (16%), Positives = 66/176 (37%), Gaps = 10/176 (5%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            +L GL + H R + H +++P N+++   R+ ++KL + G  +                  
Sbjct: 110  LLKGLGFCHSRNVLHRDLKPQNLLIN--RNGELKLANFGLARAFGIPVRCYSAEVVTLWY 167

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASP-FRGQSEPETRQNVNFVRYRF-EYLF 1072
                 +   +      D+WSAG +   L +   P F G    +  + +  +     E  +
Sbjct: 168  RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW 227

Query: 1073 KELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKR---ETNYTFRLSAKNV 1125
              +T+        ++      + +   ++      +DL +   + N   R+SA+  
Sbjct: 228  PSMTKLPDYKPYPMYPATTSLVNVVPKLNATG---RDLLQNLLKCNPVQRISAEEA 280

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (109), Expect = 1e-05
 Identities = 24/125 (19%), Positives = 41/125 (32%), Gaps = 10/125 (8%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD---TLHQVNTEFDNLRSLRH 652
            KY+ + +I  G +  V KA  +  T  +VA K      D          E   L+ L+H
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNR-ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60

Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE--HY 710
           + I  L +             LV E         + S   +   + V + + Q  +   +
Sbjct: 61  KNIVRLHDVLHS----DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116

Query: 711 LKKNR 715
                
Sbjct: 117 CHSRN 121

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 3e-05
 Identities = 16/117 (13%), Positives = 33/117 (28%), Gaps = 27/117 (23%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASP-FRGQSEPETRQNVNFVRYRF------- 1195
               +   +      D+WSAG +   L +   P F G    +  + +  +           
Sbjct: 170  PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPS 229

Query: 1196 -------------------EYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
                                 +  +L       L  + K  P +R + EE  ++ + 
Sbjct: 230  MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (96), Expect = 5e-04
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 467 LLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF 526
             +  +         +  ++ QLL GL + H  ++ H  L P +LL+   G   L L +F
Sbjct: 88  KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG--ELKLANF 145

Query: 527 GLSRRITSFGK 537
           GL+R      +
Sbjct: 146 GLARAFGIPVR 156

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 0.003
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          Y+  +++G G  G V+ A  R +    A K +
Sbjct: 4  YEKLEKIGEGTYGTVFKAKNRETHEIVALKRV 35

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.1 bits (246), Expect = 1e-22
 Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 8/169 (4%)

Query: 172 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKN 229
           ++V      +   Y     +G G  G V  AV+  +G   A K +    +   +      
Sbjct: 7   QEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR 66

Query: 230 ELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGGGELL----HSLTRQSYYTEYDIAHY 285
           EL ++  + H N++ L D +   ++    ++       +      L +     E  I   
Sbjct: 67  ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFL 126

Query: 286 IRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           + Q+L GL Y+H   I H  L PG+L V       L + DFGL+R+  S
Sbjct: 127 VYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC--ELKILDFGLARQADS 173

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 4e-10
 Identities = 34/181 (18%), Positives = 74/181 (40%), Gaps = 10/181 (5%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
             + V  +L GL+Y+H  G+ H +++P N+ +      ++K++D G  ++     T     
Sbjct: 124  QFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE--DCELKILDFGLARQADSEMT----G 177

Query: 1009 NTPNPEFAAPEVLAEEPIFPQ-TDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR 1067
                  + APEV+     + Q  D+WS G +   +++G + F+G    +  + +  V   
Sbjct: 178  YVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGT 237

Query: 1068 FEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKR---ETNYTFRLSAKN 1124
                F +  Q       +    E++    A+ + +      +L       +   R++A  
Sbjct: 238  PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGE 297

Query: 1125 V 1125
             
Sbjct: 298  A 298

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 7e-08
 Identities = 28/148 (18%), Positives = 49/148 (33%), Gaps = 13/148 (8%)

Query: 580 YSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT--- 636
           Y  E +   W        Y+ +  +  G +  V  A +   T   VA K       +   
Sbjct: 5   YRQEVTKTAWEVR---AVYRDLQPVGSGAYGAVCSAVDG-RTGAKVAIKKLYRPFQSELF 60

Query: 637 LHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIA--VLVMEKLQGADVLSYLSSRHEY 694
             +   E   L+ +RHE +  LL+ + P  T  +     LVM  +        L    + 
Sbjct: 61  AKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDL--GKLMKHEKL 118

Query: 695 TEQNVATIISQAWE--HYLKKNREQIAD 720
            E  +  ++ Q  +   Y+        D
Sbjct: 119 GEDRIQFLVYQMLKGLRYIHAAGIIHRD 146

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 1e-06
 Identities = 14/118 (11%), Positives = 32/118 (27%), Gaps = 28/118 (23%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV--------------- 1188
               +L         D+WS G +   +++G + F+G    +  + +               
Sbjct: 187  PEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 246

Query: 1189 -------------NFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
                            +  F  +    +  A   L  +      +R T  E   + + 
Sbjct: 247  QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 304

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 8e-05
 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 465 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT 524
           G  L  L +     E  I   + Q+L GL Y+H   I H  L PG+L V       L + 
Sbjct: 106 GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC--ELKIL 163

Query: 525 DFGLSRRITS 534
           DFGL+R+  S
Sbjct: 164 DFGLARQADS 173

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 0.002
 Identities = 11/45 (24%), Positives = 18/45 (40%)

Query: 47 RQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          ++V      +   Y     +G G  G V  AV+  +G   A K +
Sbjct: 7  QEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL 51

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.7 bits (240), Expect = 2e-22
 Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 8/156 (5%)

Query: 185 YDFGDELGRGVTGIVYHAVERSS---GRNYAAKVMTGKG---NQYKSLFKNELDIMNQLC 238
               ++LG G  G+V      +      + A K +        +    F  E++ M+ L 
Sbjct: 10  LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           HRNL+RL+    T     +      G  L      Q ++    ++ Y  Q+  G+ Y+  
Sbjct: 70  HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
               H  L   +LL+A      + + DFGL R +  
Sbjct: 130 KRFIHRDLAARNLLLATRD--LVKIGDFGLMRALPQ 163

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 5e-10
 Identities = 26/140 (18%), Positives = 56/140 (40%), Gaps = 8/140 (5%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG---TLIHPINTP 1011
            V +G+ YL  +   H ++   N+++A      VK+ D G  + + +      +      P
Sbjct: 120  VAEGMGYLESKRFIHRDLAARNLLLA--TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 177

Query: 1012 NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEY 1070
               + APE L        +D W  GV  + + + G  P+ G +  +    ++    R   
Sbjct: 178  -FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236

Query: 1071 LFKELTQEATRFLMLIFKHE 1090
              ++  Q+    ++  + H+
Sbjct: 237  P-EDCPQDIYNVMVQCWAHK 255

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 1e-08
 Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 2/87 (2%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APE L        +D W  GV  + + + G  P+ G +  +    ++    R     ++ 
Sbjct: 182  APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP-EDC 240

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHE 1229
             Q+    ++  +   P  RPT     +
Sbjct: 241  PQDIYNVMVQCWAHKPEDRPTFVALRD 267

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 2e-05
 Identities = 17/123 (13%), Positives = 36/123 (29%), Gaps = 11/123 (8%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTEN--LVAAKLFEY----SHDTLHQVNTEFDNLRS 649
              + + ++  G F VV +    A +     VA K  +       + +     E + + S
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 650 LRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEH 709
           L H  +  L          +    +V E      +L  L     +      +  +     
Sbjct: 68  LDHRNLIRLYGVVL-----TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 122

Query: 710 YLK 712
            + 
Sbjct: 123 GMG 125

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 2e-05
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 463 PGGELL-HSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
           P G LL      Q ++    ++ Y  Q+  G+ Y+      H  L   +LL+A      +
Sbjct: 93  PLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD--LV 150

Query: 522 LLTDFGLSRRITS 534
            + DFGL R +  
Sbjct: 151 KIGDFGLMRALPQ 163

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.6 bits (242), Expect = 2e-22
 Identities = 30/155 (19%), Positives = 58/155 (37%), Gaps = 7/155 (4%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM-----TGKGNQYKSLFKNELDIMNQLCH 239
           +     LG G  G VY  +    G      V           +      +E  +M  + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 240 RNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
            ++ RL     T     I   +  G  L +    +       + ++  Q+  G++Y+   
Sbjct: 71  PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 130

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            + H  L   ++LV  P   H+ +TDFGL++ + +
Sbjct: 131 RLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGA 163

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 4e-10
 Identities = 30/140 (21%), Positives = 55/140 (39%), Gaps = 6/140 (4%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP-NP 1013
            +  G+ YL  R L H ++   NV++ +     VK+ D G  + +       H        
Sbjct: 120  IAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLF 1072
            ++ A E +       Q+DVWS GV  + L++ G+ P+ G    E    +     R     
Sbjct: 178  KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGERLPQ-P 235

Query: 1073 KELTQEATRFLMLIFKHEVD 1092
               T +    ++  +  + D
Sbjct: 236  PICTIDVYMIMVKCWMIDAD 255

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 5e-06
 Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 3/85 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            A E +       Q+DVWS GV  + L++ G+ P+ G    E    +     R        
Sbjct: 181  ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGERLPQ-PPIC 238

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEEC 1227
            T +    ++  +      RP   E 
Sbjct: 239  TIDVYMIMVKCWMIDADSRPKFREL 263

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 8e-05
 Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 8/106 (7%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           G  L +    +       + ++  Q+  G++Y+    + H  L   ++LV  P   H+ +
Sbjct: 95  GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKI 152

Query: 524 TDFGLSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHTP 569
           TDFGL++ + +  K    E G              L++I    +T 
Sbjct: 153 TDFGLAKLLGAEEKEYHAEGGKV------PIKWMALESILHRIYTH 192

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.4 bits (239), Expect = 4e-22
 Identities = 39/161 (24%), Positives = 82/161 (50%), Gaps = 10/161 (6%)

Query: 183 DAYDFGDELGRGVTGIVY---HAVERSSGRNYAAKVM----TGKGNQYKSLFKNELDIMN 235
           + ++    LG G  G V+         +G+ YA KV+      +  +     + E  ++ 
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 236 QLCHR-NLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
            +     LV LH +++T+    +I +   GGEL   L+++  +TE+++  Y+ +++  L+
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 143

Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF 335
           ++H+L I +  +   ++L+   G  H++LTDFGLS+   + 
Sbjct: 144 HLHKLGIIYRDIKLENILLDSNG--HVVLTDFGLSKEFVAD 182

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (168), Expect = 6e-13
 Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 6/161 (3%)

Query: 928  FKLGTSTLCYLPIVIPTTHKDAY-CVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQ 986
            +  G     +L      T  +    V  ++  L++LH  G+ + +I+ +N+++ S  +  
Sbjct: 110  YINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS--NGH 167

Query: 987  VKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVL--AEEPIFPQTDVWSAGVLAYVLLS 1044
            V L D G ++      T          E+ AP+++   +       D WS GVL Y LL+
Sbjct: 168  VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 227

Query: 1045 GASPFRGQSEPETRQNVNFVRYRFEYLF-KELTQEATRFLM 1084
            GASPF    E  ++  ++    + E  + +E++  A   + 
Sbjct: 228  GASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQ 268

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 2e-07
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 1150 EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF-KELTQEATR 1208
            +       D WS GVL Y LL+GASPF    E  ++  ++    + E  + +E++  A  
Sbjct: 206  DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKD 265

Query: 1209 FLMLIFKRAPGKRP-----TVEECHENRWL 1233
             +  +  + P KR        +E  E+ + 
Sbjct: 266  LIQRLLMKDPKKRLGCGPRDADEIKEHLFF 295

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 4e-06
 Identities = 22/73 (30%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 463 PGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL 522
            GGEL   L+++  +TE+++  Y+ +++  L+++H+L I +  +   ++L+   G  H++
Sbjct: 112 NGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG--HVV 169

Query: 523 LTDFGLSRRITSF 535
           LTDFGLS+   + 
Sbjct: 170 LTDFGLSKEFVAD 182

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 3e-05
 Identities = 23/129 (17%), Positives = 50/129 (38%), Gaps = 12/129 (9%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKAN--TENLVAAKLFEYSH-----DTLHQVNTEFDNLR 648
           + ++ +  +  G +  V    + +   T  L A K+ + +       T     TE   L 
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE 708
            +R       L  +    T + +  L+++ + G ++ ++LS R  +TE  V   + +   
Sbjct: 84  HIRQSPFLVTL--HYAFQTETKL-HLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVL 140

Query: 709 --HYLKKNR 715
              +L K  
Sbjct: 141 ALEHLHKLG 149

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.1 bits (238), Expect = 5e-22
 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 5/155 (3%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLCHR 240
           + +   +++G G  G+VY A  + +G   A K +    +     S    E+ ++ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61

Query: 241 NLVRLHDSYETKDSFTIISELAG-GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRL 299
           N+V+L D   T++   ++ E      +     +  +      I  Y+ QLL GL + H  
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121

Query: 300 SIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            + H  L P +LL+   G   + L DFGL+R    
Sbjct: 122 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGV 154

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.5 bits (143), Expect = 8e-10
 Identities = 31/176 (17%), Positives = 64/176 (36%), Gaps = 11/176 (6%)

Query: 956  LDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEF 1015
            L GL + H   + H +++P N+++ +     +KL D G  +         +        +
Sbjct: 112  LQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVR-TYTHEVVTLWY 168

Query: 1016 AAPEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKE 1074
             APE+L          D+WS G +   +++  + F G SE +    +       + +   
Sbjct: 169  RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228

Query: 1075 LTQEATRFLMLIFKHE-VDWITLANNIDHEFWHVKDLKR---ETNYTFRLSAKNVI 1126
                   +     K    D+  +   +D +    + L       +   R+SAK  +
Sbjct: 229  GVTSMPDYKPSFPKWARQDFSKVVPPLDEDG---RSLLSQMLHYDPNKRISAKAAL 281

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 6e-08
 Identities = 19/117 (16%), Positives = 37/117 (31%), Gaps = 27/117 (23%)

Query: 1144 APEVLAEEP-IFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV-------------- 1188
            APE+L          D+WS G +   +++  + F G SE +    +              
Sbjct: 170  APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229

Query: 1189 ------------NFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
                         + R  F  +   L ++    L  +    P KR + +    + + 
Sbjct: 230  VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 3e-04
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 9/124 (7%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT---LHQVNTEFDNLRSLRH 652
           + +Q + +I  G + VV KA  K  T  +VA K      +T         E   L+ L H
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNK-LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60

Query: 653 ERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE--HY 710
             I  LL+      T + + ++     Q        S+        + + + Q  +   +
Sbjct: 61  PNIVKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117

Query: 711 LKKN 714
              +
Sbjct: 118 CHSH 121

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 0.002
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 58 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          + +   +++G G  G+VY A  + +G   A K +
Sbjct: 2  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 35

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 0.003
 Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 2/87 (2%)

Query: 462 GPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
               +     +  +      I  Y+ QLL GL + H   + H  L P +LL+   G   +
Sbjct: 84  HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AI 141

Query: 522 LLTDFGLSRRITSFGKLNPLEYGNGQY 548
            L DFGL+R      +    E     Y
Sbjct: 142 KLADFGLARAFGVPVRTYTHEVVTLWY 168

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 95.3 bits (236), Expect = 7e-22
 Identities = 21/154 (13%), Positives = 53/154 (34%), Gaps = 6/154 (3%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN-LV 243
           Y  G  +G G  G+++      + +  A K             ++E      L     + 
Sbjct: 7   YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFE--PRRSDAPQLRDEYRTYKLLAGCTGIP 64

Query: 244 RLHDSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAH 303
            ++   +      ++ +L G             ++   +A   +Q+L+ +  +H  S+ +
Sbjct: 65  NVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 124

Query: 304 LGLTPGDLLVA---HPGGRHLLLTDFGLSRRITS 334
             + P + L+          + + DFG+ +    
Sbjct: 125 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 158

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 71.4 bits (174), Expect = 7e-14
 Identities = 23/158 (14%), Positives = 53/158 (33%), Gaps = 14/158 (8%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV---RSVQVKLIDLGCTQRVTKLGTLI 1005
            A     +L  +Q +H + L + +I+PDN ++       +  + ++D G  +      T  
Sbjct: 104  AMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQ 163

Query: 1006 HPINTPN------PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059
            H              + +           + D+ + G +    L G+ P++G      +Q
Sbjct: 164  HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ 223

Query: 1060 NVNFVRYR-----FEYLFKELTQEATRFLMLIFKHEVD 1092
                +  +        L     +E  +++        D
Sbjct: 224  KYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFD 261

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 54.4 bits (130), Expect = 3e-08
 Identities = 11/91 (12%), Positives = 27/91 (29%), Gaps = 5/91 (5%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYR-----FEYL 1198
            +           + D+ + G +    L G+ P++G      +Q    +  +        L
Sbjct: 181  SINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL 240

Query: 1199 FKELTQEATRFLMLIFKRAPGKRPTVEECHE 1229
                 +E  +++      A    P  +    
Sbjct: 241  CAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 45.2 bits (106), Expect = 3e-05
 Identities = 11/100 (11%), Positives = 33/100 (33%), Gaps = 4/100 (4%)

Query: 473 RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVA---HPGGRHLLLTDFGLS 529
               ++   +A   +Q+L+ +  +H  S+ +  + P + L+          + + DFG+ 
Sbjct: 94  CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 153

Query: 530 RRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHTP 569
            +               +  ++ T     +        + 
Sbjct: 154 -KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSR 192

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 44.8 bits (105), Expect = 3e-05
 Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 7/122 (5%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERI 655
             Y+    I  G F V+ +          VA K      D   Q+  E+   + L     
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNL-LNNQQVAIKFEPRRSDA-PQLRDEYRTYKLLAGCTG 62

Query: 656 ASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWE--HYLKK 713
              +  +          VLV++ L  +          +++ + VA    Q       + +
Sbjct: 63  IPNVYYF---GQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE 119

Query: 714 NR 715
             
Sbjct: 120 KS 121

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 39.0 bits (90), Expect = 0.003
 Identities = 7/32 (21%), Positives = 13/32 (40%)

Query: 60 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          Y  G  +G G  G+++      + +  A K  
Sbjct: 7  YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFE 38

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.8 bits (235), Expect = 9e-22
 Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 5/153 (3%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNL 242
           ++     +LG+G  G V+      + R  A K +   G      F  E  +M +L H  L
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKL 74

Query: 243 VRLHDSYETKDSFTIISELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSI 301
           V+L+     +  + +   ++ G  L         Y     +     Q+ SG+ Y+ R++ 
Sbjct: 75  VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 134

Query: 302 AHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            H  L   ++LV         + DFGL+R I  
Sbjct: 135 VHRDLRAANILVGENL--VCKVADFGLARLIED 165

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 1e-11
 Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 3/114 (2%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
                  +  G+ Y+      H ++   N+++    ++  K+ D G  + +          
Sbjct: 116  VDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTARQG 173

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
                 ++ APE         ++DVWS G+L   L + G  P+ G    E    V
Sbjct: 174  AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 227

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (121), Expect = 4e-07
 Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APE         ++DVWS G+L   L + G  P+ G    E    V    YR      E 
Sbjct: 182  APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMP-CPPEC 239

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHE 1229
             +     +   +++ P +RPT E    
Sbjct: 240  PESLHDLMCQCWRKEPEERPTFEYLQA 266

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (111), Expect = 7e-06
 Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 11/124 (8%)

Query: 588 EWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNL 647
            W  E P +  +   ++ +G F  V        T   VA K  +    +      E   +
Sbjct: 11  AW--EIPRESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVM 66

Query: 648 RSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE--YTEQNVATIISQ 705
           + LRHE++  L               +V E +    +L +L            +  + +Q
Sbjct: 67  KKLRHEKLVQLYAVVSEEPIY-----IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 121

Query: 706 AWEH 709
               
Sbjct: 122 IASG 125

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 2e-04
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 463 PGGELL--HSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRH 520
             G LL         Y     +     Q+ SG+ Y+ R++  H  L   ++LV       
Sbjct: 94  SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL--V 151

Query: 521 LLLTDFGLSRRITS 534
             + DFGL+R I  
Sbjct: 152 CKVADFGLARLIED 165

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.9 bits (235), Expect = 1e-21
 Identities = 37/177 (20%), Positives = 69/177 (38%), Gaps = 27/177 (15%)

Query: 183 DAYDFGDELGRGVTGIVYHA-----VERSSGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQ 236
           +   FG  LG G  G V  A     ++  +    A K++    +   +    +EL +++ 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 237 LC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTR------------------QSYY 277
           L  H N+V L  +        +I+E    G+LL+ L R                  +   
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
              D+  +  Q+  G+ ++   +  H  L   ++L+ H       + DFGL+R I +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR--ITKICDFGLARDIKN 197

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (116), Expect = 2e-06
 Identities = 25/138 (18%), Positives = 51/138 (36%), Gaps = 5/138 (3%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNP- 1013
            V  G+ +L  +   H ++   N+++        K+ D G  + +      +   N   P 
Sbjct: 154  VAKGMAFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIKNDSNYVVKGNARLPV 211

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF- 1072
            ++ APE +       ++DVWS G+  + L S  S       P   +    ++  F  L  
Sbjct: 212  KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY-PGMPVDSKFYKMIKEGFRMLSP 270

Query: 1073 KELTQEATRFLMLIFKHE 1090
            +    E    +   +  +
Sbjct: 271  EHAPAEMYDIMKTCWDAD 288

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 6e-06
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 18/127 (14%)

Query: 574 DPPPLNYSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKA----AEKANTENLVAAKL 629
           DP  L Y       +W  E P ++  F   +  G F  VV+A      K++    VA K+
Sbjct: 8   DPTQLPY-----DHKW--EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKM 60

Query: 630 FEYSHDT--LHQVNTEFDNLRSL-RHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLS 686
            + S        + +E   L  L  H  I +LL A     T     +++ E     D+L+
Sbjct: 61  LKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC----TIGGPTLVITEYCCYGDLLN 116

Query: 687 YLSSRHE 693
           +L  + +
Sbjct: 117 FLRRKRD 123

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 6e-04
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 477 YTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
               D+  +  Q+  G+ ++   +  H  L   ++L+ H       + DFGL+R I +
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR--ITKICDFGLARDIKN 197

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 0.002
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 2/87 (2%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF-KEL 1202
            APE +       ++DVWS G+  + L S  S       P   +    ++  F  L  +  
Sbjct: 215  APESIFNCVYTFESDVWSYGIFLWELFSLGSSPY-PGMPVDSKFYKMIKEGFRMLSPEHA 273

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHE 1229
              E    +   +   P KRPT ++  +
Sbjct: 274  PAEMYDIMKTCWDADPLKRPTFKQIVQ 300

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.8 bits (227), Expect = 2e-20
 Identities = 40/185 (21%), Positives = 66/185 (35%), Gaps = 22/185 (11%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMT---GKGNQYKSLFKNELDIMNQLC- 238
           +   F D +G G  G V  A  +  G    A +              F  EL+++ +L  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYY----------------TEYDI 282
           H N++ L  + E +    +  E A  G LL  L +                    +   +
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129

Query: 283 AHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLE 342
            H+   +  G+DY+ +    H  L   ++LV         + DFGLSR    + K     
Sbjct: 130 LHFAADVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIADFGLSRGQEVYVKKTMGR 187

Query: 343 YDVRY 347
             VR+
Sbjct: 188 LPVRW 192

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 6e-09
 Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 5/108 (4%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            V  G+ YL  +   H ++   N+++    +   K+ D G ++                  
Sbjct: 136  VARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIADFGLSRGQEVYVKKTMGRLPV--R 191

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
            + A E L        +DVWS GVL + ++S G +P+ G +  E  + +
Sbjct: 192  WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 239

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 4e-06
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 3/87 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            A E L        +DVWS GVL + ++S G +P+ G +  E  + +    YR E      
Sbjct: 194  AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-QGYRLEK-PLNC 251

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHE 1229
              E    +   ++  P +RP+  +   
Sbjct: 252  DDEVYDLMRQCWREKPYERPSFAQILV 278

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 0.002
 Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 2/83 (2%)

Query: 448 GPDVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 507
             ++  +               + +  S  +   + H+   +  G+DY+ +    H  L 
Sbjct: 95  HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLA 154

Query: 508 PGDLLVAHPGGRHLLLTDFGLSR 530
             ++LV         + DFGLSR
Sbjct: 155 ARNILVGE--NYVAKIADFGLSR 175

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 0.003
 Identities = 26/128 (20%), Positives = 40/128 (31%), Gaps = 8/128 (6%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAA---KLFEYSHDTLHQVNTEFDNLRSL-R 651
           +  +F   I  G F  V+KA  K +   + AA        S D       E + L  L  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 652 HERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYL 711
           H  I +LL A +          L +E     ++L +L             I +       
Sbjct: 70  HPNIINLLGACEH----RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 125

Query: 712 KKNREQIA 719
            +     A
Sbjct: 126 SQQLLHFA 133

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.4 bits (221), Expect = 5e-20
 Identities = 38/157 (24%), Positives = 60/157 (38%), Gaps = 8/157 (5%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAA----KVMTGKGNQYKSLFKNELDIMNQLC 238
           +  + G  +G G  G V+  +  S      A           +  +  F  E   M Q  
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 239 HRNLVRLHDSYETKDSFTIISELAGGGELL-HSLTRQSYYTEYDIAHYIRQLLSGLDYMH 297
           H ++V+L     T++   II EL   GEL      R+       +  Y  QL + L Y+ 
Sbjct: 67  HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 125

Query: 298 RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
                H  +   ++LV+      + L DFGLSR +  
Sbjct: 126 SKRFVHRDIAARNVLVSSND--CVKLGDFGLSRYMED 160

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 6e-09
 Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 5/137 (3%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPE 1014
            +   L YL  +   H +I   NV+++S     VKL D G ++ +               +
Sbjct: 117  LSTALAYLESKRFVHRDIAARNVLVSSND--CVKLGDFGLSRYMEDSTYYKASKGKLPIK 174

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAY-VLLSGASPFRGQSEPETRQNVNFVRYRFEYLFK 1073
            + APE +        +DVW  GV  + +L+ G  PF+G    +    +         +  
Sbjct: 175  WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI--ENGERLPMPP 232

Query: 1074 ELTQEATRFLMLIFKHE 1090
                     +   + ++
Sbjct: 233  NCPPTLYSLMTKCWAYD 249

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 8e-06
 Identities = 19/126 (15%), Positives = 39/126 (30%), Gaps = 12/126 (9%)

Query: 588 EWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKL----FEYSHDTLHQVNTE 643
           ++  E   ++ +    I  G+F  V +    +     +A  +       S     +   E
Sbjct: 1   DY--EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE 58

Query: 644 FDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRH-EYTEQNVATI 702
              +R   H  I  L+          N   ++ME     ++ S+L  R       ++   
Sbjct: 59  ALTMRQFDHPHIVKLIGVITE-----NPVWIIMELCTLGELRSFLQVRKYSLDLASLILY 113

Query: 703 ISQAWE 708
             Q   
Sbjct: 114 AYQLST 119

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 0.002
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 3/73 (4%)

Query: 463 PGGELL-HSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 521
             GEL      R+       +  Y  QL + L Y+      H  +   ++LV+      +
Sbjct: 90  TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND--CV 147

Query: 522 LLTDFGLSRRITS 534
            L DFGLSR +  
Sbjct: 148 KLGDFGLSRYMED 160

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.1 bits (220), Expect = 9e-20
 Identities = 35/166 (21%), Positives = 62/166 (37%), Gaps = 18/166 (10%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHR 240
           I       + +G+G  G V+    R  G   A K+ + +  +     + E+     L H 
Sbjct: 1   IARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREER-SWFREAEIYQTVMLRHE 57

Query: 241 NLVRLHDSYETKDS----FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
           N++    +    +       ++S+    G L   L R +   E  +        SGL ++
Sbjct: 58  NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE-GMIKLALSTASGLAHL 116

Query: 297 H--------RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
           H        + +IAH  L   ++LV   G     + D GL+ R  S
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAVRHDS 160

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 2e-06
 Identities = 23/137 (16%), Positives = 42/137 (30%), Gaps = 4/137 (2%)

Query: 596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERI 655
                   I +G+F  V +          VA K+F    +       E      LRHE I
Sbjct: 3   RTIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 59

Query: 656 ASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNR 715
              + A            LV +  +   +  YL +R+  T + +  +           + 
Sbjct: 60  LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHM 118

Query: 716 EQIADTADKSRIPRTIR 732
           E +      +   R ++
Sbjct: 119 EIVGTQGKPAIAHRDLK 135

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 3e-06
 Identities = 24/168 (14%), Positives = 58/168 (34%), Gaps = 12/168 (7%)

Query: 957  DGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINT---PNP 1013
            + +       + H +++  N+++    +    + DLG   R       I           
Sbjct: 119  EIVGTQGKPAIAHRDLKSKNILVKK--NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176

Query: 1014 EFAAPEVLAEE------PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET-RQNVNFVRY 1066
             + APEVL +         F + D+++ G++ + +    S      + +    ++     
Sbjct: 177  RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236

Query: 1067 RFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRET 1114
              E + K + ++  R  +       + + +   I  E W+     R T
Sbjct: 237  SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 284

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 89.1 bits (220), Expect = 1e-19
 Identities = 34/182 (18%), Positives = 65/182 (35%), Gaps = 32/182 (17%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERS-----SGRNYAAKVMTGKGNQ-YKSLFKNELDIMNQ 236
           +  ++  ++G G  G V+ A              A K++  + +   ++ F+ E  +M +
Sbjct: 13  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 72

Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSLTRQSYY------------------- 277
             + N+V+L           ++ E    G+L   L   S +                   
Sbjct: 73  FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 132

Query: 278 -----TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
                +  +     RQ+ +G+ Y+      H  L   + LV       + + DFGLSR I
Sbjct: 133 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM--VVKIADFGLSRNI 190

Query: 333 TS 334
            S
Sbjct: 191 YS 192

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.9 bits (152), Expect = 6e-11
 Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 7/169 (4%)

Query: 925  IQWFKLGTSTLCYLPIVIPTTHKDAYCVTS-VLDGLQYLHWRGLCHLNIEPDNVVMASVR 983
            +    L T      P   P +  +  C+   V  G+ YL  R   H ++   N ++    
Sbjct: 118  LSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGE-- 175

Query: 984  SVQVKLIDLGCTQRVTKLGTLIHPINTP-NPEFAAPEVLAEEPIFPQTDVWSAGVLAYVL 1042
            ++ VK+ D G ++ +          N      +  PE +       ++DVW+ GV+ + +
Sbjct: 176  NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 235

Query: 1043 LS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHE 1090
             S G  P+ G +  E    V           +    E    + L +   
Sbjct: 236  FSYGLQPYYGMAHEEVIYYV--RDGNILACPENCPLELYNLMRLCWSKL 282

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.2 bits (119), Expect = 7e-07
 Identities = 25/140 (17%), Positives = 45/140 (32%), Gaps = 10/140 (7%)

Query: 585 SPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKA----NTENLVAAKLF--EYSHDTLH 638
           +P   S E P +  +++ +I  G F  V +A            +VA K+   E S D   
Sbjct: 2   NPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA 61

Query: 639 QVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQN 698
               E   +    +  I  LL              L+ E +   D+  +L S   +T  +
Sbjct: 62  DFQREAALMAEFDNPNIVKLLGVC----AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCS 117

Query: 699 VATIISQAWEHYLKKNREQI 718
           ++                 +
Sbjct: 118 LSHSDLSTRARVSSPGPPPL 137

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.8 bits (118), Expect = 1e-06
 Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 3/88 (3%)

Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKE 1201
              PE +       ++DVW+ GV+ + + S G  P+ G +  E    V           + 
Sbjct: 209  MPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV--RDGNILACPEN 266

Query: 1202 LTQEATRFLMLIFKRAPGKRPTVEECHE 1229
               E    + L + + P  RP+    H 
Sbjct: 267  CPLELYNLMRLCWSKLPADRPSFCSIHR 294

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.5 bits (104), Expect = 5e-05
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 478 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 534
           +  +     RQ+ +G+ Y+      H  L   + LV       + + DFGLSR I S
Sbjct: 138 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM--VVKIADFGLSRNIYS 192

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.7 bits (219), Expect = 1e-19
 Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 8/158 (5%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSG----RNYAAKVM-TGKGNQYKSLFKNELDIMNQL 237
                   +G G  G VY  + ++S        A K +  G   + +  F  E  IM Q 
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 238 CHRNLVRLHDSYETKDSFTIISELAGGGELL-HSLTRQSYYTEYDIAHYIRQLLSGLDYM 296
            H N++RL           II+E    G L      +   ++   +   +R + +G+ Y+
Sbjct: 67  SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 126

Query: 297 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
             ++  H  L   ++LV         ++DFGLSR +  
Sbjct: 127 ANMNYVHRDLAARNILVNSNL--VCKVSDFGLSRVLED 162

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (139), Expect = 2e-09
 Identities = 20/138 (14%), Positives = 53/138 (38%), Gaps = 5/138 (3%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN-- 1012
            +  G++YL      H ++   N+++ S  ++  K+ D G ++ +       +  +     
Sbjct: 119  IAAGMKYLANMNYVHRDLAARNILVNS--NLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 176

Query: 1013 PEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLF 1072
              + APE ++       +DVWS G++ + +++       +             +R     
Sbjct: 177  IRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP- 235

Query: 1073 KELTQEATRFLMLIFKHE 1090
             +      + +M  ++ E
Sbjct: 236  MDCPSAIYQLMMQCWQQE 253

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 5e-07
 Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 1/86 (1%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELT 1203
            APE ++       +DVWS G++ + +++       +             +R      +  
Sbjct: 181  APEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP-MDCP 239

Query: 1204 QEATRFLMLIFKRAPGKRPTVEECHE 1229
                + +M  +++   +RP   +   
Sbjct: 240  SAIYQLMMQCWQQERARRPKFADIVS 265

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 4e-04
 Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 464 GGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLL 523
           G        +   ++   +   +R + +G+ Y+  ++  H  L   ++LV         +
Sbjct: 94  GALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL--VCKV 151

Query: 524 TDFGLSRRITS 534
           +DFGLSR +  
Sbjct: 152 SDFGLSRVLED 162

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 4e-04
 Identities = 19/134 (14%), Positives = 33/134 (24%), Gaps = 8/134 (5%)

Query: 590 STEPPTDKYQFISEIHRGKFSVVVKAAEKANTEN---LVAAKLF--EYSHDTLHQVNTEF 644
           +TE           I  G+F  V K   K ++      VA K     Y+         E 
Sbjct: 1   TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 60

Query: 645 DNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIIS 704
             +    H  I  L            + ++      GA          E++   +  ++ 
Sbjct: 61  GIMGQFSHHNIIRLEGVIS---KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR 117

Query: 705 QAWEHYLKKNREQI 718
                         
Sbjct: 118 GIAAGMKYLANMNY 131

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.0 bits (222), Expect = 1e-19
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 8/158 (5%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLC 238
           + + Y     +G G  G V  A +  +G   A K +    +   +      EL ++  + 
Sbjct: 16  VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK 75

Query: 239 HRNLVRLHDSYETKDSFT----IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLD 294
           H N++ L D +    S      +       G  L+++ +    T+  +   I Q+L GL 
Sbjct: 76  HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135

Query: 295 YMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI 332
           Y+H   I H  L P +L V         + DFGL+R  
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELK--ILDFGLARHT 171

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.5 bits (143), Expect = 1e-09
 Identities = 27/178 (15%), Positives = 60/178 (33%), Gaps = 8/178 (4%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
             + +  +L GL+Y+H   + H +++P N+ +     +++    L         G +    
Sbjct: 124  QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW 183

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
                   A   +L         D+WS G +   LL+G + F G    +  + +  +    
Sbjct: 184  YR-----APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238

Query: 1069 EYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKR---ETNYTFRLSAK 1123
                 +     +    +    ++  +  AN          DL       +   R++A 
Sbjct: 239  GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (120), Expect = 7e-07
 Identities = 25/219 (11%), Positives = 49/219 (22%), Gaps = 34/219 (15%)

Query: 1049 FRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVK 1108
            F      E   +V  V +        + +        +       +     I       +
Sbjct: 86   FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR 145

Query: 1109 DLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQ------APEVLAEEPIFPQTDVWSA 1162
            DLK             ++ +                        +L         D+WS 
Sbjct: 146  DLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 205

Query: 1163 GVLAYVLLSGASPFRGQSEPETRQNV----------------------------NFVRYR 1194
            G +   LL+G + F G    +  + +                               +  
Sbjct: 206  GCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN 265

Query: 1195 FEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
            F  +F      A   L  +      KR T  +   + + 
Sbjct: 266  FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 1e-06
 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 9/133 (6%)

Query: 580 YSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT--- 636
           Y  E +   W      ++YQ +S +  G +  V  A +   T   VA K       +   
Sbjct: 5   YRQELNKTIWEV---PERYQNLSPVGSGAYGSVCAAFDT-KTGLRVAVKKLSRPFQSIIH 60

Query: 637 LHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIA-VLVMEKLQGADVLSYLSSRHEYT 695
             +   E   L+ ++HE +  LL+ + P+ +      V ++  L GAD+ + +    + T
Sbjct: 61  AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLT 119

Query: 696 EQNVATIISQAWE 708
           + +V  +I Q   
Sbjct: 120 DDHVQFLIYQILR 132

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 0.001
 Identities = 9/36 (25%), Positives = 15/36 (41%)

Query: 56 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM 91
          + + Y     +G G  G V  A +  +G   A K +
Sbjct: 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL 51

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.4 bits (210), Expect = 4e-18
 Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 13/158 (8%)

Query: 181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVM--TGKGNQYKSLFKNELDIMNQLC 238
           +   Y     +G G  GIV  A +    RN A K +    +   +      EL +M  + 
Sbjct: 15  VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 74

Query: 239 HRNLVRLHDSYETKDSFT------IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSG 292
           H+N++ L + +  + +        ++ EL            Q       +++ + Q+L G
Sbjct: 75  HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV---IQMELDHERMSYLLYQMLCG 131

Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR 330
           + ++H   I H  L P +++V       L + DFGL+R
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLAR 167

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (135), Expect = 1e-08
 Identities = 29/136 (21%), Positives = 57/136 (41%), Gaps = 4/136 (2%)

Query: 949  AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPI 1008
            +Y +  +L G+++LH  G+ H +++P N+V+ S     +K++D G  +       +   +
Sbjct: 122  SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMTPYV 179

Query: 1009 NTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068
             T    + APEV+         D+WS G +   ++     F G+   +    V       
Sbjct: 180  VTRY--YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237

Query: 1069 EYLFKELTQEATRFLM 1084
               F +  Q   R  +
Sbjct: 238  CPEFMKKLQPTVRNYV 253

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.9 bits (118), Expect = 1e-06
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 12/131 (9%)

Query: 580 YSVEDSPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLF---EYSHDT 636
           YSVE     ++      +YQ +  I  G   +V  A +    +  VA K       +   
Sbjct: 4   YSVEVGDSTFTV---LKRYQNLKPIGSGAQGIVCAAYDA-VLDRNVAIKKLSRPFQNQTH 59

Query: 637 LHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIA--VLVMEKLQGADVLSYLSSRHEY 694
             +   E   ++ + H+ I SLL  + P  T        LVME +   ++   +  + E 
Sbjct: 60  AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVI--QMEL 116

Query: 695 TEQNVATIISQ 705
             + ++ ++ Q
Sbjct: 117 DHERMSYLLYQ 127

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (95), Expect = 6e-04
 Identities = 25/164 (15%), Positives = 50/164 (30%), Gaps = 43/164 (26%)

Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV-------------- 1188
            +APEV+         D+WS G +   ++     F G+   +    V              
Sbjct: 185  RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244

Query: 1189 -------------NFVRYRFEYLF------------KELTQEATRFLMLIFKRAPGKRPT 1223
                          +    F  LF            K    +A   L  +    P KR +
Sbjct: 245  LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304

Query: 1224 VEECHENRWL----VPSEYMIKKRERAVFLGNRLKEFSDEYHDL 1263
            V++  ++ ++     P+E      +      +  +   +E+ +L
Sbjct: 305  VDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKEL 348

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.0 bits (204), Expect = 1e-17
 Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 18/168 (10%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERS-----SGRNYAAKVMT-GKGNQYKSLFKNELDIMNQ 236
           +      ELG+G  G+VY  V +           A K +      + +  F NE  +M +
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 237 LCHRNLVRLHDSYETKDSFTIISELAGGGELLHSL----------TRQSYYTEYDIAHYI 286
               ++VRL           +I EL   G+L   L             +  +   +    
Sbjct: 80  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 139

Query: 287 RQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
            ++  G+ Y++     H  L   + +VA      + + DFG++R I  
Sbjct: 140 GEIADGMAYLNANKFVHRDLAARNCMVAEDF--TVKIGDFGMTRDIYE 185

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 3e-07
 Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 8/154 (5%)

Query: 911  LEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTS-VLDGLQYLHWRGLCH 969
            + M+ +  G+ K  ++  +     +   P++ P +      +   + DG+ YL+     H
Sbjct: 100  VIMELMTRGDLKSYLRSLR---PAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVH 156

Query: 970  LNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPIN-TPNPEFAAPEVLAEEPIFP 1028
             ++   N ++A      VK+ D G T+ + +               + +PE L +     
Sbjct: 157  RDLAARNCMVAE--DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 214

Query: 1029 QTDVWSAGVLAYVLLSGA-SPFRGQSEPETRQNV 1061
             +DVWS GV+ + + + A  P++G S  +  + V
Sbjct: 215  YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 248

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 5e-06
 Identities = 29/130 (22%), Positives = 45/130 (34%), Gaps = 14/130 (10%)

Query: 577 PLNYSVED--SPIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKA----NTENLVAAKLF 630
           P  +S  D   P EW  E   +K     E+ +G F +V +   K       E  VA K  
Sbjct: 1   PEYFSAADVYVPDEW--EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV 58

Query: 631 --EYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYL 688
               S     +   E   ++      +  LL       +     +++ME +   D+ SYL
Sbjct: 59  NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV----SQGQPTLVIMELMTRGDLKSYL 114

Query: 689 SSRHEYTEQN 698
            S       N
Sbjct: 115 RSLRPAMANN 124

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (104), Expect = 5e-05
 Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 3/86 (3%)

Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGA-SPFRGQSEPETRQNVNFVRYRFEYLFKE 1201
             +PE L +      +DVWS GV+ + + + A  P++G S  +  + V  +          
Sbjct: 202  MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV--MEGGLLDKPDN 259

Query: 1202 LTQEATRFLMLIFKRAPGKRPTVEEC 1227
                    + + ++  P  RP+  E 
Sbjct: 260  CPDMLFELMRMCWQYNPKMRPSFLEI 285

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.5 bits (195), Expect = 2e-16
 Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 14/165 (8%)

Query: 185 YDFGDELGRGVTGIVYHAVE-RSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMNQLC--- 238
           Y+   E+G G  G V+ A + ++ GR  A K +  +  +         E+ ++  L    
Sbjct: 9   YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 68

Query: 239 HRNLVRLHDSYETKDS------FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSG 292
           H N+VRL D      +        +   +            +       I   + QLL G
Sbjct: 69  HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 128

Query: 293 LDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGK 337
           LD++H   + H  L P ++LV   G   + L DFGL+R  +    
Sbjct: 129 LDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGLARIYSFQMA 171

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.7 bits (159), Expect = 7e-12
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 4/118 (3%)

Query: 944  TTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT 1003
             T      +  +L GL +LH   + H +++P N+++ S  S Q+KL D G  +  +    
Sbjct: 114  PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSFQMA 171

Query: 1004 LIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061
            L   + T    + APEVL +       D+WS G +   +      FRG S+ +    +
Sbjct: 172  LTSVVVTL--WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 227

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 3e-07
 Identities = 19/115 (16%), Positives = 34/115 (29%), Gaps = 24/115 (20%)

Query: 1143 QAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFV----------- 1191
            +APEVL +       D+WS G +   +      FRG S+ +    +  V           
Sbjct: 182  RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 241

Query: 1192 -------------RYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWL 1233
                             E    ++ +     L+      P KR +      + + 
Sbjct: 242  DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 296

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (106), Expect = 3e-05
 Identities = 23/131 (17%), Positives = 46/131 (35%), Gaps = 10/131 (7%)

Query: 595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNT------EFDNLR 648
             +Y+ ++EI  G +  V KA +  N    VA K             +         +L 
Sbjct: 6   DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 65

Query: 649 SLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHE--YTEQNVATIISQA 706
           +  H  +  L +    S T     + ++ +    D+ +YL    E     + +  ++ Q 
Sbjct: 66  TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 125

Query: 707 WE--HYLKKNR 715
                +L  +R
Sbjct: 126 LRGLDFLHSHR 136

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 0.001
 Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 11/102 (10%)

Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
                 +       I   + QLL GLD++H   + H  L P ++LV   G   + L DFG
Sbjct: 104 YLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFG 161

Query: 528 LSRRITSFGKLNPLEYGNGQYKVAVTPAMKHLQAITEAGHTP 569
           L+R  +                V VT   +  + + ++ +  
Sbjct: 162 LARIYSFQMA---------LTSVVVTLWYRAPEVLLQSSYAT 194

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 3e-16
 Identities = 32/156 (20%), Positives = 57/156 (36%), Gaps = 8/156 (5%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRN---YAAKVMTGKGNQ-YKSLFKNELDIMNQLCHR 240
             F + +GRG  G VYH     +       A K +    +    S F  E  IM    H 
Sbjct: 29  VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 88

Query: 241 NLVRLHD-SYETKDSFTIISELAGGGELL-HSLTRQSYYTEYDIAHYIRQLLSGLDYMHR 298
           N++ L      ++ S  ++      G+L           T  D+  +  Q+  G+ ++  
Sbjct: 89  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 148

Query: 299 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
               H  L   + ++       + + DFGL+R +  
Sbjct: 149 KKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYD 182

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 3e-09
 Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 5/102 (4%)

Query: 958  GLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPN---PE 1014
            G+++L  +   H ++   N ++       VK+ D G  + +           T      +
Sbjct: 142  GMKFLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 199

Query: 1015 FAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056
            + A E L  +    ++DVWS GVL + L++  +P        
Sbjct: 200  WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 241

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 4e-06
 Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            A E L  +    ++DVWS GVL + L++ GA P+   +  +    +  ++ R     +  
Sbjct: 202  ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL--LQGRRLLQPEYC 259

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHE 1229
                   ++  +      RP+  E   
Sbjct: 260  PDPLYEVMLKCWHPKAEMRPSFSELVS 286

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 75.6 bits (185), Expect = 5e-16
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 25/180 (13%)

Query: 188 GDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSL----------FKNELDIMNQL 237
           G  +G G    V++            K        +K +          F        + 
Sbjct: 5   GKLMGEGKESAVFNCYSEK-FGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARN 63

Query: 238 CHRNLVRLHDSYETK----DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGL 293
             R L +L      K    +   ++ EL                   +    +  +L  +
Sbjct: 64  EFRALQKLQGLAVPKVYAWEGNAVLMEL-------IDAKELYRVRVENPDEVLDMILEEV 116

Query: 294 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLNPLEYDVRYVRQALR 353
              +   I H  L+  ++LV+  G   + + DF  S  +   G    LE DVR +     
Sbjct: 117 AKFYHRGIVHGDLSQYNVLVSEEG---IWIIDFPQSVEVGEEGWREILERDVRNIITYFS 173

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 44.4 bits (104), Expect = 2e-05
 Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 3/65 (4%)

Query: 468 LHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFG 527
           L            +    +  +L  +   +   I H  L+  ++LV+  G   + + DF 
Sbjct: 91  LIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG---IWIIDFP 147

Query: 528 LSRRI 532
            S  +
Sbjct: 148 QSVEV 152

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.1 bits (186), Expect = 2e-15
 Identities = 35/176 (19%), Positives = 65/176 (36%), Gaps = 26/176 (14%)

Query: 183 DAYDFGDELGRGVTGIVYHAV-----ERSSGRNYAAKVMTGKGNQ--YKSLFKNELDIMN 235
           D    G  LGRG  G V  A      + ++ R  A K++        +++L      +++
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 236 QLCHRNLVRLHDS-YETKDSFTIISELAGGGELLHSL----------------TRQSYYT 278
              H N+V L  +  +      +I E    G L   L                  + + T
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132

Query: 279 EYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS 334
              +  Y  Q+  G++++      H  L   ++L++      + + DFGL+R I  
Sbjct: 133 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN--VVKICDFGLARDIYK 186

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 6e-07
 Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 5/138 (3%)

Query: 955  VLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTP-NP 1013
            V  G+++L  R   H ++   N++++      VK+ D G  + + K    +   +     
Sbjct: 143  VAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDIYKDPDYVRKGDARLPL 200

Query: 1014 EFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSG-ASPFRGQSEPETRQNVNFVRYRFEYLF 1072
            ++ APE + +     Q+DVWS GVL + + S  ASP+ G    E          R     
Sbjct: 201  KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR-AP 259

Query: 1073 KELTQEATRFLMLIFKHE 1090
               T E  + ++  +  E
Sbjct: 260  DYTTPEMYQTMLDCWHGE 277

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (104), Expect = 5e-05
 Identities = 15/87 (17%), Positives = 36/87 (41%), Gaps = 2/87 (2%)

Query: 448 GPDVKTWEDNVPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLT 507
             ++ T+  +  N     ++      + + T   +  Y  Q+  G++++      H  L 
Sbjct: 102 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 161

Query: 508 PGDLLVAHPGGRHLLLTDFGLSRRITS 534
             ++L++      + + DFGL+R I  
Sbjct: 162 ARNILLSEKN--VVKICDFGLARDIYK 186

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 7e-04
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 10/113 (8%)

Query: 588 EWSTEPPTDKYQFISEIHRGKFSVVVKA----AEKANTENLVAAKLF--EYSHDTLHQVN 641
           +W  E P D+ +    + RG F  V++A     +K  T   VA K+     +H     + 
Sbjct: 7   KW--EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM 64

Query: 642 TEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEY 694
           +E   L  + H      L      T      ++++E  +  ++ +YL S+   
Sbjct: 65  SELKILIHIGHHLNVVNLLGA--CTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 115

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (183), Expect = 7e-15
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 25/164 (15%)

Query: 183 DAYDFGDELGRGVTGIVYHAVERSSGRN-------YAAKVM-TGKGNQYKSLFKNELDIM 234
           D    G  LG G  G V  A      ++        A K++ +    +  S   +E+++M
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 235 NQLC-HRNLVRLHDSYETKDSFTIISELAGGGELLHSL----------------TRQSYY 277
             +  H+N++ L  +        +I E A  G L   L                  +   
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 132

Query: 278 TEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHL 321
           +  D+     Q+  G++Y+      H  L   ++LV       +
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 176

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 3e-08
 Identities = 32/154 (20%), Positives = 58/154 (37%), Gaps = 6/154 (3%)

Query: 913  MKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKD----AYCVTSVLDGLQYLHWRGLC 968
            ++  + G  +  +Q  +       Y P   P           C   V  G++YL  +   
Sbjct: 98   VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI 157

Query: 969  HLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028
            H ++   NV++     +++    L                  P  ++ APE L +     
Sbjct: 158  HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP-VKWMAPEALFDRIYTH 216

Query: 1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNV 1061
            Q+DVWS GVL + + + G SP+ G    E  + +
Sbjct: 217  QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 250

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 6e-06
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 3/87 (3%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKEL 1202
            APE L +     Q+DVWS GVL + + + G SP+ G    E  + +    +R +      
Sbjct: 205  APEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE-GHRMDK-PSNC 262

Query: 1203 TQEATRFLMLIFKRAPGKRPTVEECHE 1229
            T E    +   +   P +RPT ++  E
Sbjct: 263  TNELYMMMRDCWHAVPSQRPTFKQLVE 289

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 2e-04
 Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 13/140 (9%)

Query: 588 EWSTEPPTDKYQFISEIHRGKFSVVVKA------AEKANTENLVAAKLF--EYSHDTLHQ 639
            W  E P D+      +  G F  VV A       +K N    VA K+   + +   L  
Sbjct: 7   RW--ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD 64

Query: 640 VNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNV 699
           + +E + ++ +   +   ++      T    +  +++E     ++  YL +R     +  
Sbjct: 65  LISEMEMMKMIGKHKN--IINLLGACTQDGPL-YVIVEYASKGNLREYLQARRPPGLEYS 121

Query: 700 ATIISQAWEHYLKKNREQIA 719
                   E    K+    A
Sbjct: 122 YNPSHNPEEQLSSKDLVSCA 141

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.3 bits (155), Expect = 3e-11
 Identities = 27/156 (17%), Positives = 55/156 (35%), Gaps = 18/156 (11%)

Query: 185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVR 244
           Y    +LG G    V+ A +  +  + A K++      Y    ++E+ ++ ++   +  +
Sbjct: 15  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVR-GDKVYTEAAEDEIKLLQRVNDADNTK 73

Query: 245 L---------------HDSYETKDSFTIISELAGGGELLHSLTRQS-YYTEYDIAHYIRQ 288
                           +          ++ E+ G   L      +        +    +Q
Sbjct: 74  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 133

Query: 289 LLSGLDYM-HRLSIAHLGLTPGDLLVAHPGGRHLLL 323
           LL GLDYM  R  I H  + P ++L+        L+
Sbjct: 134 LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLI 169

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.3 bits (129), Expect = 5e-08
 Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 9/128 (7%)

Query: 949  AYCVTSVLDGLQYLHWR-GLCHLNIEPDNVVMASV----RSVQVKLIDLGCTQRVTKLGT 1003
                  +L GL Y+H R G+ H +I+P+NV+M  V      +Q+K+ DLG      +   
Sbjct: 128  KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--- 184

Query: 1004 LIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF 1063
              +  +    E+ +PEVL   P     D+WS   L + L++G   F         ++ + 
Sbjct: 185  -HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 243

Query: 1064 VRYRFEYL 1071
            +    E L
Sbjct: 244  IAQIIELL 251

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.3 bits (98), Expect = 3e-04
 Identities = 23/135 (17%), Positives = 38/135 (28%), Gaps = 45/135 (33%)

Query: 1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYL----- 1198
            +PEVL   P     D+WS   L + L++G   F         ++ + +    E L     
Sbjct: 197  SPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPS 256

Query: 1199 ----------------------------------------FKELTQEATRFLMLIFKRAP 1218
                                                     K+  +E + FL  + +  P
Sbjct: 257  YLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDP 316

Query: 1219 GKRPTVEECHENRWL 1233
             KR        + WL
Sbjct: 317  RKRADAGGLVNHPWL 331

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 11/68 (16%), Positives = 19/68 (27%), Gaps = 1/68 (1%)

Query: 597 KYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIA 656
           +Y  + ++  G FS V  A +       VA K+             E   L+ +      
Sbjct: 14  RYILVRKLGWGHFSTVWLAKDM-VNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 72

Query: 657 SLLEAYKP 664
                   
Sbjct: 73  KEDSMGAN 80

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 9/47 (19%), Positives = 20/47 (42%)

Query: 60  YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVE 106
           Y    +LG G    V+ A +  +  + A K++ G    + +    ++
Sbjct: 15  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIK 61

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 7e-07
 Identities = 16/54 (29%), Positives = 27/54 (50%)

Query: 1093 WITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPE 1146
            W T+AN++    + V+ L+  T Y F + A N  G S+    S   +T++  P 
Sbjct: 62   WQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSGPS 115

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 127

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 6e-06
 Identities = 18/75 (24%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 1089 HEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVL 1148
                W         +     +L    NY+FR+ A N IG S     S  + TK   P+  
Sbjct: 60   KPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDK- 118

Query: 1149 AEEPIFPQTDVWSAG 1163
                    T   S+G
Sbjct: 119  ------NPTSGPSSG 127

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (96), Expect = 6e-05
 Identities = 16/52 (30%), Positives = 23/52 (44%)

Query: 1089 HEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKT 1140
              +    L+N  D     V DL   T Y+FR+   N++G S    PS   +T
Sbjct: 58   EWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQT 109

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 1105 WHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTK 1141
              +  L++  +Y FR+ A N++G SE   PS  +   
Sbjct: 71   VEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVS 107

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 39.3 bits (90), Expect = 3e-04
 Identities = 13/88 (14%), Positives = 27/88 (30%), Gaps = 2/88 (2%)

Query: 1054 EPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRE 1113
                   +  V ++ +Y  + + +                   +         V DLK +
Sbjct: 21   MVPRNDGLPIVIFKVQY--RMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQ 78

Query: 1114 TNYTFRLSAKNVIGWSEKGIPSALFKTK 1141
              Y FR+ A      +++   SA F  +
Sbjct: 79   HTYRFRILAVYSNNDNKESNTSAKFYLQ 106

>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor, FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fibroblast growth factor receptor, FGFR
species: Human (Homo sapiens), FGFR2a [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 5e-04
 Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)

Query: 893 APFF----REKPITIPVVIGDKLEMKCLAVGEPKPVIQWFK 929
           AP++    + +     V   + ++ +C A G P P ++W K
Sbjct: 1   APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLK 41

>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.6 bits (86), Expect = 8e-04
 Identities = 9/62 (14%), Positives = 17/62 (27%)

Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVT 953
             F+  P       G+   + C  V    P I W   G   +    +       +   + 
Sbjct: 2   LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIR 61

Query: 954 SV 955
            +
Sbjct: 62  GI 63

>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 7/35 (20%), Positives = 11/35 (31%)

Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWF 928
           P   + P    V  G+ +E+     G       W 
Sbjct: 1   PQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWM 35

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 0.002
 Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 1092 DWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKE 1142
            DW+      +     +++L  +T Y F++ A+N  G          F+T +
Sbjct: 61   DWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQ-FRTPK 110

>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 893 APFFREKPI-TIPVVIGDKLEMKCLAVGEPKPVIQWF 928
           AP + +KP   I V  G  + + C   G P P + W 
Sbjct: 2   APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWS 38

>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Titin
species: Human (Homo sapiens), different modules [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 0.003
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 893 APFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWF 928
           AP   E+  +  V  G     +   VG+P P  +W+
Sbjct: 4   APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWY 39

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 0.003
 Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 1/57 (1%)

Query: 1089 HEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAP 1145
              ++   L          +  L+  ++YT  +   N  G      P  +F T E + 
Sbjct: 66   RHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS-PDRVFNTPEGSG 121

>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 36.0 bits (82), Expect = 0.004
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 894 PFFREKPITIPVVIGDKLEMKCLAVGEPKPVIQWF 928
           P + +        IG  L   C+A G+P+P ++W 
Sbjct: 2   PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWL 36

>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor, FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fibroblast growth factor receptor, FGFR
species: Human (Homo sapiens), FGFR1 [TaxId: 9606]

 Score = 36.5 bits (83), Expect = 0.004
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 892 HAPFFREK-PITIPVVIGDKLEMKCLAVGEPKPVIQWFKLGT 932
           H P  +   P     V+G  +E  C    + +P IQW K   
Sbjct: 3   HRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVE 44

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.0 bits (82), Expect = 0.004
 Identities = 11/44 (25%), Positives = 17/44 (38%)

Query: 1099 NIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKE 1142
             ++   + VKDL       FR+   N+ G SE          +E
Sbjct: 55   PVERCGFTVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRE 98

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 0.004
 Identities = 10/56 (17%), Positives = 17/56 (30%), Gaps = 1/56 (1%)

Query: 1087 FKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKE 1142
             K +                V  LK  T Y F++ A+   G       +   +T +
Sbjct: 43   EKDKEMQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFS-QAMEVETGK 97

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	1310
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.98
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.98
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.98
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.98
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.98
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.98
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.98
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.97
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.97
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.97
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.97
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.97
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.97
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.97
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.97
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.97
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.97
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.97
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.97
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.97
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.96
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.96
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.96
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.96
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.96
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.96
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.96
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.96
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.96
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.96
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.96
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.95
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.95
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.95
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.95
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.95
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.95
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.95
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.95
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.94
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.93
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.88
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.31
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.05
d2cqva1	101	Telokin {Human (Homo sapiens) [TaxId: 9606]}	97.67
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.34
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.25
d1wf5a1	108	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	96.94
d1uema_	117	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	96.65
d1wwca_	105	NT3 binding domain of trkC receptor {Human (Homo s	96.52
d1cfba1	100	Neuroglian, two amino proximal Fn3 repeats {Drosop	96.5
d1x5ya1	98	Myosin binding protein C, fast-type {Mouse (Mus mu	96.32
d1bpva_	104	Type I titin module {Human (Homo sapiens) [TaxId:	96.03
d1koaa1	97	Twitchin {Nematode (Caenorhabditis elegans) [TaxId	95.97
d1wwbx_	103	Ligand binding domain of trkB receptor {Human (Hom	95.96
d1x4za1	108	Brother of CDO precursor (BOC) {Mouse (Mus musculu	95.65
d2dava1	113	Myosin-binding protein C, slow-type {Human (Homo s	95.62
d1he7a_	107	High affinity nerve growth factor receptor TrkA, d	95.4
d2crma1	107	Fibronectin type-III domain containing protein 3a,	95.02
d2nxyb2	84	CD4 C2-set domains {Human (Homo sapiens) [TaxId: 9	94.91
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	94.64
d1iray1	101	Type-1 interleukin-1 receptor {Human (Homo sapiens	94.52
d2haza1	101	Neural cell adhesion molecule 1, NCAM {Human (Homo	94.48
d2oz4a3	84	Intercellular adhesion molecule-1, ICAM-1 {Human (	94.47
d2crza1	97	Fibronectin type-III domain containing protein 3a,	94.38
d1gl4b_	89	Perlecan Ig3 domain {Mouse (Mus musculus) [TaxId:	94.37
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	94.37
d2vkwa2	93	Neural cell adhesion molecule 1, NCAM {Human (Homo	94.22
d2crya1	115	Kin of IRRE-like protein 3, KIRREL3 {Human (Homo s	93.79
d1wiua_	93	Twitchin {Nematode (Caenorhabditis elegans) [TaxId	93.63
d1cs6a4	89	Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}	93.33
d1g1ca_	98	Titin {Human (Homo sapiens), different modules [Ta	93.2
d1x5xa1	96	Fibronectin type-III domain containing protein 3a,	93.2
d1fhga_	102	Telokin {Turkey (Meleagris gallopavo) [TaxId: 9103	93.16
d1cs6a3	91	Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}	93.05
d1tnna_	91	Titin {Human (Homo sapiens), different modules [Ta	92.96
d1qz1a3	100	Neural cell adhesion molecule (NCAM) {Rat (Rattus	92.95
d1wisa1	111	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	92.91
d1biha4	89	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	92.63
d2ic2a1	107	Hedgehog receptor iHog {Fruit fly (Drosophila mela	92.14
d1x3da1	105	Fibronectin type-III domain containing protein 3a,	91.92
d1wfna1	106	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	91.86
d1rhfa1	91	Tyrosine-protein kinase receptor tyro3, N-terminal	91.85
d2aw2a1	104	B- and T-lymphocyte attenuator CD272 {Human (Homo	91.83
d2ibga1	95	Hedgehog receptor iHog {Fruit fly (Drosophila mela	91.36
d1vcaa2	90	Vascular cell adhesion molecule-1 (VCAM-1) {Human	91.29
d1gsma1	90	Mucosal addressin cell adhesion molecule-1 (MADCAM	91.27
d1ueya_	127	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	91.14
d1cd9b1	107	Granulocyte colony-stimulating factor (GC-SF) rece	90.96
d1wfoa1	117	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	90.85
d1pkoa_	126	Myelin oligodendrocyte glycoprotein (MOG) {Rat (Ra	90.39
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	89.87
d1l6za2	96	Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-t	89.86
d2d9qb2	105	Granulocyte colony-stimulating factor (GC-SF) rece	89.82
d1cfba2	105	Neuroglian, two amino proximal Fn3 repeats {Drosop	89.81
d1f97a2	110	Junction adhesion molecule, JAM, C-terminal domain	89.68
d2c9aa1	96	Receptor-type tyrosine-protein phosphatase mu {Hum	89.6
d1f2qa2	89	IgE high affinity receptor alpha subunit {Human (H	89.35
d1qg3a2	103	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	89.28
d1v5ja_	108	KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}	89.05
d1nbqa2	104	Junction adhesion molecule, JAM, C-terminal domain	88.88
d1iray2	103	Type-1 interleukin-1 receptor {Human (Homo sapiens	88.59
d1x5ga1	103	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	88.19
d1rhfa2	85	Tyrosine-protein kinase receptor tyro3, second dom	88.01
d1wfua_	120	Fibronectin type 3 and ankyrin repeat domains 1 pr	87.99
d1cd9b2	106	Granulocyte colony-stimulating factor (GC-SF) rece	87.91
d2fnba_	95	Fibronectin, different Fn3 modules {Human (Homo sa	87.71
d1x4xa1	93	Fibronectin type-III domain containing protein 3a,	87.49
d1f97a1	102	Junction adhesion molecule, JAM, N-terminal domain	87.14
d1epfa2	92	Neural cell adhesion molecule (NCAM) {Rat (Rattus	86.76
d2fcba2	88	Fc gamma receptor ectodomain (CD32) {Human (Homo s	86.46
d1x5fa1	107	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	86.43
d1bqua2	115	Cytokine receptor gp130 cytokine-binding domains {	86.2
d1olza1	92	Semaphorin 4d Ig-like domain {Human (Homo sapiens)	85.95
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	85.95
d1epfa1	97	Neural cell adhesion molecule (NCAM) {Rat (Rattus	85.92
d1wj3a_	117	Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI	85.35
d2djsa1	95	Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta	85.02
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	84.76
d2dn7a1	94	Receptor-type tyrosine-protein phosphatase F, PTPR	84.51
d1erna2	105	Erythropoietin (EPO) receptor {Human (Homo sapiens	84.44
d1iarb2	101	Interleukin-4 receptor alpha chain {Human (Homo sa	84.11
d1x5ka1	111	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	84.11
d1fnla2	89	Fc gamma receptor ectodomain (CD32) {Human (Homo s	83.33
d2ifga1	92	High affinity nerve growth factor receptor TrkA, d	82.85
d1biha1	94	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	82.45
d1x5la1	98	Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta	82.4
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	81.68
d1iama1	103	Intercellular cell adhesion molecule-1 (ICAM-1) {H	80.89
d1n26a3	104	Interleukin-6 receptor alpha chain, domains 2 and	80.82
d1bqua1	95	Cytokine receptor gp130 cytokine-binding domains {	80.65
d1f6fb2	103	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	80.57
d1hnga1	98	CD2, first domain {Rat (Rattus norvegicus) [TaxId:	80.33

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-44  Score=396.47  Aligned_cols=204  Identities=22%  Similarity=0.408  Sum_probs=166.5

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCc--chhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccc
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH--DTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASN  670 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  670 (1310)
                      |-.+.|+++..|-+|.||.|.+|..+. |++.||.|++....  +....+..|...|++|+|+||..+++++...    +
T Consensus         2 Pf~~dy~~~~~lG~G~fg~V~~~~~~~-~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~----~   76 (271)
T d1nvra_           2 PFVEDWDLVQTLGEGAYGEVQLAVNRV-TEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG----N   76 (271)
T ss_dssp             TTTTEEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEET----T
T ss_pred             CCCcceEEEEEEecCcCeEEEEEEECC-CCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccC----c
Confidence            446789999999999999999988776 88999999987654  3456788999999999999999999999876    6


Q ss_pred             hhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccccccc
Q psy5279         671 IAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTW  750 (1310)
Q Consensus       671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  750 (1310)
                      ...||||||.|.++.++|..+..++|+++.                                                  
T Consensus        77 ~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~--------------------------------------------------  106 (271)
T d1nvra_          77 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------------------------------------------  106 (271)
T ss_dssp             EEEEEEECCTTEEGGGGSBTTTBCCHHHHH--------------------------------------------------
T ss_pred             eeEEEEeccCCCcHHHHHhcCCCCCHHHHH--------------------------------------------------
Confidence            678999999999998888665555554433                                                  


Q ss_pred             cCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcch
Q psy5279         751 EDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPV  830 (1310)
Q Consensus       751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  830 (1310)
                                                                                                      
T Consensus       107 --------------------------------------------------------------------------------  106 (271)
T d1nvra_         107 --------------------------------------------------------------------------------  106 (271)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCE
Q psy5279         831 IRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDK  910 (1310)
Q Consensus       831 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~  910 (1310)
                                                                                                      
T Consensus       107 --------------------------------------------------------------------------------  106 (271)
T d1nvra_         107 --------------------------------------------------------------------------------  106 (271)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEE
Q psy5279         911 LEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLI  990 (1310)
Q Consensus       911 l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~  990 (1310)
                                                             .++.||++||+|||++|||||||||+|||++.  ++.+||+
T Consensus       107 ---------------------------------------~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~--~~~~KL~  145 (271)
T d1nvra_         107 ---------------------------------------RFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--RDNLKIS  145 (271)
T ss_dssp             ---------------------------------------HHHHHHHHHHHHHHHTTEECSCCCGGGEEECT--TCCEEEC
T ss_pred             ---------------------------------------HHHHHHHHHHHHHHHcCCccCcccHHHEEECC--CCCEEEc
Confidence                                                   34569999999999999999999999999985  4569999


Q ss_pred             eeccceeeccCCc-ccccCCCCCCcccccccccCCCCC-CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279         991 DLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPIF-PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus       991 DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ys-~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      |||+|+....... .......|||.|||||++.+..+. .++|||||||++|+|++|.+||.+.
T Consensus       146 DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~  209 (271)
T d1nvra_         146 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP  209 (271)
T ss_dssp             CCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred             cchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCC
Confidence            9999987643322 222345688999999999888764 6789999999999999999998654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.3e-43  Score=397.42  Aligned_cols=205  Identities=29%  Similarity=0.521  Sum_probs=152.1

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCc--chhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH--DTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      -.|.|.++..|-+|.||+|.+|..+. |+..||.|.+..+.  +....+..|...|++|+||||..+++++...    +.
T Consensus         7 i~d~Y~~~~~lG~G~fg~Vy~~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~----~~   81 (307)
T d1a06a_           7 IRDIYDFRDVLGTGAFSEVILAEDKR-TQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG----GH   81 (307)
T ss_dssp             GGGTEEEEEESBSGGGGGEEEEEETT-TCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECS----SE
T ss_pred             CccceEEEEEEeeccCeEEEEEEECC-CCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC----CE
Confidence            46789999999999999999997664 89999999987654  3345678899999999999999999999766    56


Q ss_pred             hhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccccccccc
Q psy5279         672 AVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWE  751 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  751 (1310)
                      ..||||+|.|.++..+|..+..++|+.                                                     
T Consensus        82 ~~lvmE~~~gg~L~~~l~~~~~l~e~~-----------------------------------------------------  108 (307)
T d1a06a_          82 LYLIMQLVSGGELFDRIVEKGFYTERD-----------------------------------------------------  108 (307)
T ss_dssp             EEEEECCCCSCBHHHHHHTCSCCCHHH-----------------------------------------------------
T ss_pred             EEEEEeccCCCcHHHhhhcccCCCHHH-----------------------------------------------------
Confidence            789999999999988775444333333                                                     


Q ss_pred             CCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcchh
Q psy5279         752 DNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVI  831 (1310)
Q Consensus       752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  831 (1310)
                                                                                                      
T Consensus       109 --------------------------------------------------------------------------------  108 (307)
T d1a06a_         109 --------------------------------------------------------------------------------  108 (307)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEE
Q psy5279         832 RERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKL  911 (1310)
Q Consensus       832 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l  911 (1310)
                                                                                                      
T Consensus       109 --------------------------------------------------------------------------------  108 (307)
T d1a06a_         109 --------------------------------------------------------------------------------  108 (307)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec-CCCcEEEE
Q psy5279         912 EMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLI  990 (1310)
Q Consensus       912 ~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~-~~~~VKL~  990 (1310)
                                                          +..++.||+.||+|||++|||||||||+|||+... .++.+||+
T Consensus       109 ------------------------------------~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~  152 (307)
T d1a06a_         109 ------------------------------------ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMIS  152 (307)
T ss_dssp             ------------------------------------HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEEC
T ss_pred             ------------------------------------HHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEe
Confidence                                                33456799999999999999999999999999752 35679999


Q ss_pred             eeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279         991 DLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus       991 DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      |||+|+........  ...+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+.
T Consensus       153 DFG~a~~~~~~~~~--~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~  214 (307)
T d1a06a_         153 DFGLSKMEDPGSVL--STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND  214 (307)
T ss_dssp             CC--------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ccceeEEccCCCee--eeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH
Confidence            99999765433222  234578999999999888888888888888888888888888876543

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-43  Score=391.46  Aligned_cols=103  Identities=27%  Similarity=0.514  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      +..+++||+.||+|||++|||||||||+|||++.  ++.+||+|||+|+....... ......||+.|||||++.+..|+
T Consensus       118 ~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~--~~~vkl~DFG~a~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~  194 (293)
T d1yhwa1         118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYG  194 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TCCEEECCCTTCEECCSTTC-CBCCCCSCGGGCCHHHHSSSCBC
T ss_pred             HHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECC--CCcEeeccchhheeeccccc-cccccccCCCccChhhhcCCCCC
Confidence            3456779999999999999999999999999975  46799999999987654332 22344688999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      .++|||||||++|+|++|.+||.+.+
T Consensus       195 ~~~DiwSlGvilyemltG~~Pf~~~~  220 (293)
T d1yhwa1         195 PKVDIWSLGIMAIEMIEGEPPYLNEN  220 (293)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             chhceehHhHHHHHHhhCCCCCCCCC
Confidence            99999999999999999999997654

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-43  Score=390.06  Aligned_cols=203  Identities=25%  Similarity=0.411  Sum_probs=169.1

Q ss_pred             CcchhhhhhccccchhhhHHHHhhccccceeeeecccC----cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS----HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      +.|+++.+|-+|.||+|.+|..+. |+..||.|++...    .+...++.+|.+.|++|+|+||..+++++...    +.
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----~~   80 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQ-SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA----TR   80 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS----SE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECC-CCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEEC----CE
Confidence            579999999999999999998775 8899999998643    34456788999999999999999999999866    56


Q ss_pred             hhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccccccccc
Q psy5279         672 AVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWE  751 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  751 (1310)
                      ..+|||||.|.++..+|..+..++|+.+                                                    
T Consensus        81 ~~ivmEy~~~g~L~~~l~~~~~l~e~~~----------------------------------------------------  108 (263)
T d2j4za1          81 VYLILEYAPLGTVYRELQKLSKFDEQRT----------------------------------------------------  108 (263)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHH----------------------------------------------------
T ss_pred             EEEEEeecCCCcHHHHHhhcCCCCHHHH----------------------------------------------------
Confidence            7799999999998877654443443333                                                    


Q ss_pred             CCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcchh
Q psy5279         752 DNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVI  831 (1310)
Q Consensus       752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  831 (1310)
                                                                                                      
T Consensus       109 --------------------------------------------------------------------------------  108 (263)
T d2j4za1         109 --------------------------------------------------------------------------------  108 (263)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEE
Q psy5279         832 RERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKL  911 (1310)
Q Consensus       832 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l  911 (1310)
                                                                                                      
T Consensus       109 --------------------------------------------------------------------------------  108 (263)
T d2j4za1         109 --------------------------------------------------------------------------------  108 (263)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEe
Q psy5279         912 EMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLID  991 (1310)
Q Consensus       912 ~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~D  991 (1310)
                                                           ..++.||++||+|||++|||||||||+|||++.  ++.+||+|
T Consensus       109 -------------------------------------~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~--~~~~kl~D  149 (263)
T d2j4za1         109 -------------------------------------ATYITELANALSYCHSKRVIHRDIKPENLLLGS--AGELKIAD  149 (263)
T ss_dssp             -------------------------------------HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TSCEEECC
T ss_pred             -------------------------------------HHHHHHHHHHHHHHHHCCeeeeeeccccceecC--CCCEeecc
Confidence                                                 344569999999999999999999999999985  45799999


Q ss_pred             eccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279         992 LGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus       992 FGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ||+|+......   .....||+.|||||++.+.+|+.++|||||||++|+|++|..||.+.+..++
T Consensus       150 FG~a~~~~~~~---~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~  212 (263)
T d2j4za1         150 FGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET  212 (263)
T ss_dssp             CCSCSCCCCCC---CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             cceeeecCCCc---ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHH
Confidence            99997654322   2234578999999999999999999999999999999999999987665443

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-43  Score=391.30  Aligned_cols=91  Identities=32%  Similarity=0.415  Sum_probs=78.7

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccC-cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchh
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS-HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIA  672 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  672 (1310)
                      |.|-|+.+..|-+|.||.|.+|..+. |+..||.|++... .+.+.++..|...|++|+|+||..+++++...    +..
T Consensus        10 p~d~Y~i~~~iG~G~fg~Vy~~~~~~-~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----~~~   84 (288)
T d2jfla1          10 PEDFWEIIGELGDGAFGKVYKAQNKE-TSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE----NNL   84 (288)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEET----TEE
T ss_pred             cccCeEEeEEEeeCCCcEEEEEEECC-CCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC----CeE
Confidence            56789999999999999999997765 8899999999764 45668889999999999999999999999765    556


Q ss_pred             hHHHHhhcCchhhhhhh
Q psy5279         673 VLVMEKLQGADVLSYLS  689 (1310)
Q Consensus       673 ~~~~~~~~~~~~~~~~~  689 (1310)
                      .||||||.|.++..++.
T Consensus        85 ~lvmEy~~~g~L~~~~~  101 (288)
T d2jfla1          85 WILIEFCAGGAVDAVML  101 (288)
T ss_dssp             EEEEECCTTEEHHHHHH
T ss_pred             EEEEecCCCCcHHHHHH
Confidence            78999999999876654

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2.9e-43  Score=402.11  Aligned_cols=98  Identities=27%  Similarity=0.434  Sum_probs=80.8

Q ss_pred             CCccccCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCc-chhhhhhHHhhhhhhhchhhHHHHHHhcCC
Q psy5279         586 PIEWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH-DTLHQVNTEFDNLRSLRHERIASLLEAYKP  664 (1310)
Q Consensus       586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  664 (1310)
                      |+......-.|.|.++..|-+|.||+|.+|..+. |+..||.|++.-.. .....+..|...|++|+|+||..++++|..
T Consensus        19 p~~~~~~~~~d~Y~i~~~lG~G~fg~V~~a~~~~-~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~   97 (352)
T d1koba_          19 PVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKA-TGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED   97 (352)
T ss_dssp             CCCCBCSCGGGTEEEEEEEEEETTEEEEEEEETT-TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC
T ss_pred             CccCCCCCcccceEEEEEEecCCCeEEEEEEECC-CCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence            3444444456789999999999999999998876 79999999986543 345677889999999999999999999986


Q ss_pred             CCcccchhhHHHHhhcCchhhhhh
Q psy5279         665 STTASNIAVLVMEKLQGADVLSYL  688 (1310)
Q Consensus       665 ~~~~~~~~~~~~~~~~~~~~~~~~  688 (1310)
                      .    +...||||+|.|.++..++
T Consensus        98 ~----~~~~ivmE~~~gg~L~~~~  117 (352)
T d1koba_          98 K----YEMVLILEFLSGGELFDRI  117 (352)
T ss_dssp             S----SEEEEEEECCCCCBHHHHT
T ss_pred             C----CEEEEEEEcCCCChHHHHH
Confidence            6    5678999999999876553

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=7.8e-43  Score=398.23  Aligned_cols=204  Identities=34%  Similarity=0.589  Sum_probs=162.6

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcc-hhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchhh
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHD-TLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAV  673 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  673 (1310)
                      -+.|+++..|-+|.||+|.+|..+. |++.||+|.+.-..+ ....+..|...|++|+|+||..+++++...    +...
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~-~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~----~~~~   99 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERA-TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD----NEMV   99 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETT-TTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEET----TEEE
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECC-CCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEEC----CEEE
Confidence            3579999999999999999998776 899999999876544 356788999999999999999999998765    6788


Q ss_pred             HHHHhhcCchhhhhhhccc-cchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccccccccC
Q psy5279         674 LVMEKLQGADVLSYLSSRH-EYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWED  752 (1310)
Q Consensus       674 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  752 (1310)
                      ||||+|.|.++..+|.++. .++|++                                                      
T Consensus       100 ivmE~~~gg~L~~~l~~~~~~l~e~~------------------------------------------------------  125 (350)
T d1koaa2         100 MIYEFMSGGELFEKVADEHNKMSEDE------------------------------------------------------  125 (350)
T ss_dssp             EEECCCCSCBHHHHHTCTTSCBCHHH------------------------------------------------------
T ss_pred             EEEEcCCCCCHHHHHHhhcCCCCHHH------------------------------------------------------
Confidence            9999999999988774321 222222                                                      


Q ss_pred             CCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcchhh
Q psy5279         753 NVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVIR  832 (1310)
Q Consensus       753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  832 (1310)
                                                                                                      
T Consensus       126 --------------------------------------------------------------------------------  125 (350)
T d1koaa2         126 --------------------------------------------------------------------------------  125 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEE
Q psy5279         833 ERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLE  912 (1310)
Q Consensus       833 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~  912 (1310)
                                                                                                      
T Consensus       126 --------------------------------------------------------------------------------  125 (350)
T d1koaa2         126 --------------------------------------------------------------------------------  125 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEee
Q psy5279         913 MKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDL  992 (1310)
Q Consensus       913 ~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DF  992 (1310)
                                                         +..++.||+.||+|||++|||||||||+|||++.+.++.+||+||
T Consensus       126 -----------------------------------~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DF  170 (350)
T d1koaa2         126 -----------------------------------AVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDF  170 (350)
T ss_dssp             -----------------------------------HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCC
T ss_pred             -----------------------------------HHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeec
Confidence                                               345567999999999999999999999999997655678999999


Q ss_pred             ccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279         993 GCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus       993 GlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      |+|+.+.......  ...||+.|||||++.+..|+.++|||||||++|+|++|..||.+.+.
T Consensus       171 G~a~~~~~~~~~~--~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~  230 (350)
T d1koaa2         171 GLTAHLDPKQSVK--VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND  230 (350)
T ss_dssp             TTCEECCTTSCEE--EECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             chheecccccccc--eecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH
Confidence            9998765433322  23567889999988777777777777777777777777777765443

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-42  Score=387.19  Aligned_cols=98  Identities=22%  Similarity=0.317  Sum_probs=82.2

Q ss_pred             CcchhhhhhccccchhhhHHHHhhccccceeeeeccc----CcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY----SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      +.|+++..|-+|.||+|.+|..+. |++.||.|++.-    ..+....+..|.+.|+.|+|+||..+++++...    +.
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----~~   82 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELA-TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD----EK   82 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECS----SE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECC-CCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEEC----CE
Confidence            469999999999999999998775 889999999864    345667789999999999999999999999866    56


Q ss_pred             hhHHHHhhcCchhhhhhhccccchhhh
Q psy5279         672 AVLVMEKLQGADVLSYLSSRHEYTEQN  698 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  698 (1310)
                      ..+|||+|.|.++..++..+..++|+.
T Consensus        83 ~~ivmEy~~gg~L~~~~~~~~~l~e~~  109 (288)
T d1uu3a_          83 LYFGLSYAKNGELLKYIRKIGSFDETC  109 (288)
T ss_dssp             EEEEECCCTTEEHHHHHHHHSSCCHHH
T ss_pred             EEEEEEccCCCCHHHhhhccCCCCHHH
Confidence            789999999999988775554444433

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-42  Score=391.94  Aligned_cols=91  Identities=23%  Similarity=0.417  Sum_probs=82.3

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchhhH
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIAVL  674 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  674 (1310)
                      .++|.+..+|-+|.||+|.+|..+. |+..||.|++.-.......+..|++.|+.|+|+||..+++.|...    +...|
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~-~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~----~~~~l   78 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETS-SKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESM----EELVM   78 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEET----TEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECC-CCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC----CEEEE
Confidence            5789999999999999999998776 889999999998888888899999999999999999999999765    56789


Q ss_pred             HHHhhcCchhhhhhhc
Q psy5279         675 VMEKLQGADVLSYLSS  690 (1310)
Q Consensus       675 ~~~~~~~~~~~~~~~~  690 (1310)
                      |||||.|.++..++..
T Consensus        79 vmE~~~gg~L~~~i~~   94 (321)
T d1tkia_          79 IFEFISGLDIFERINT   94 (321)
T ss_dssp             EECCCCCCBHHHHHTS
T ss_pred             EEecCCCCcHHHHHHh
Confidence            9999999998887653

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-42  Score=387.84  Aligned_cols=204  Identities=23%  Similarity=0.333  Sum_probs=168.3

Q ss_pred             CCCcchhhhhhccccchhhhHHHHhhccccceeeeecccC--cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         594 PTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS--HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      ..|.|+.+..|-+|.||+|.+|..+. |+..||.|.+...  .....++..|...|++|+||||..+++.|...    +.
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~-~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~----~~   78 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD----GE   78 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETT-TTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECS----SE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECC-CCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC----CE
Confidence            45789999999999999999987766 8999999998754  44467899999999999999999999999876    44


Q ss_pred             hhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccccccccc
Q psy5279         672 AVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWE  751 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  751 (1310)
                      ..||||+|.|.++..+|..+...+|+.                                                     
T Consensus        79 ~~iVmEy~~gg~L~~~l~~~~~l~~~~-----------------------------------------------------  105 (322)
T d1s9ja_          79 ISICMEHMDGGSLDQVLKKAGRIPEQI-----------------------------------------------------  105 (322)
T ss_dssp             EEEEEECCTTEEHHHHHHHHSSCCHHH-----------------------------------------------------
T ss_pred             EEEEEEcCCCCcHHHHHhhcCCCCHHH-----------------------------------------------------
Confidence            678999999999877764332222211                                                     


Q ss_pred             CCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcchh
Q psy5279         752 DNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVI  831 (1310)
Q Consensus       752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  831 (1310)
                                                                                                      
T Consensus       106 --------------------------------------------------------------------------------  105 (322)
T d1s9ja_         106 --------------------------------------------------------------------------------  105 (322)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEE
Q psy5279         832 RERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKL  911 (1310)
Q Consensus       832 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l  911 (1310)
                                                                                                      
T Consensus       106 --------------------------------------------------------------------------------  105 (322)
T d1s9ja_         106 --------------------------------------------------------------------------------  105 (322)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCCCcEEEE
Q psy5279         912 EMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRSVQVKLI  990 (1310)
Q Consensus       912 ~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~~~VKL~  990 (1310)
                                                          +..++.||+.||+|||+ +||+||||||+|||++.  ++.+||+
T Consensus       106 ------------------------------------~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~--~~~vkl~  147 (322)
T d1s9ja_         106 ------------------------------------LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLC  147 (322)
T ss_dssp             ------------------------------------HHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECT--TCCEEEC
T ss_pred             ------------------------------------HHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECC--CCCEEEe
Confidence                                                23456799999999997 49999999999999975  4579999


Q ss_pred             eeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279         991 DLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus       991 DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      |||+|+......   ....+||+.|||||++.+..|+.++||||+||++|+|++|+.||.+.+..+
T Consensus       148 DFGla~~~~~~~---~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~  210 (322)
T d1s9ja_         148 DFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE  210 (322)
T ss_dssp             CCCCCHHHHHHT---C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTH
T ss_pred             eCCCccccCCCc---cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence            999997653221   123468899999999999999999999999999999999999998876544

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-42  Score=380.20  Aligned_cols=99  Identities=26%  Similarity=0.439  Sum_probs=81.7

Q ss_pred             CCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCc-------chhhhhhHHhhhhhhhchhhHHHHHHhcCCC
Q psy5279         593 PPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSH-------DTLHQVNTEFDNLRSLRHERIASLLEAYKPS  665 (1310)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  665 (1310)
                      .-.|.|.++.+|-+|.||+|.+|..+. |+..||.|++....       ....++..|...|++|+|+||..++++|...
T Consensus         7 ~i~d~Y~~~~~lG~G~fg~Vy~~~~~~-~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~   85 (293)
T d1jksa_           7 NVDDYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK   85 (293)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             CcccCEEEeEEEecCCCeEEEEEEECC-CCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            345789999999999999999998775 88999999985432       2356788999999999999999999999776


Q ss_pred             CcccchhhHHHHhhcCchhhhhhhccccchh
Q psy5279         666 TTASNIAVLVMEKLQGADVLSYLSSRHEYTE  696 (1310)
Q Consensus       666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  696 (1310)
                          +...||||+|.|.++..+|..+..++|
T Consensus        86 ----~~~~iv~E~~~gg~L~~~i~~~~~l~~  112 (293)
T d1jksa_          86 ----TDVILILELVAGGELFDFLAEKESLTE  112 (293)
T ss_dssp             ----SEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             ----CEEEEEEEcCCCccccchhccccccch
Confidence                567899999999998887755443433

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-42  Score=376.36  Aligned_cols=203  Identities=24%  Similarity=0.350  Sum_probs=162.6

Q ss_pred             CCcc-hhhhhhccccchhhhHHHHhhccccceeeeeccc---CcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccc
Q psy5279         595 TDKY-QFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY---SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASN  670 (1310)
Q Consensus       595 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  670 (1310)
                      ..+| .|..+|-+|.||+|.+|..+. |+..||.|.+..   +.+...++.+|.+.|++|+||||..+++.|..+....+
T Consensus         7 ~gry~~~~~~iG~G~fg~Vy~~~~~~-~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~   85 (270)
T d1t4ha_           7 DGRFLKFDIEIGRGSFKTVYKGLDTE-TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK   85 (270)
T ss_dssp             TSCEEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCE
T ss_pred             CCCEEEeeeEEecCcCcEEEEEEECC-CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCC
Confidence            3445 898999999999999997765 788999998754   34456678899999999999999999999876655567


Q ss_pred             hhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccccccc
Q psy5279         671 IAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTW  750 (1310)
Q Consensus       671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  750 (1310)
                      ...+|||+|.|.++..+|..+...+++.                                                    
T Consensus        86 ~~~ivmE~~~~g~L~~~l~~~~~~~~~~----------------------------------------------------  113 (270)
T d1t4ha_          86 CIVLVTELMTSGTLKTYLKRFKVMKIKV----------------------------------------------------  113 (270)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHH----------------------------------------------------
T ss_pred             EEEEEEeCCCCCcHHHHHhccccccHHH----------------------------------------------------
Confidence            7889999999999887765433333222                                                    


Q ss_pred             cCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcch
Q psy5279         751 EDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPV  830 (1310)
Q Consensus       751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  830 (1310)
                                                                                                      
T Consensus       114 --------------------------------------------------------------------------------  113 (270)
T d1t4ha_         114 --------------------------------------------------------------------------------  113 (270)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCE
Q psy5279         831 IRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDK  910 (1310)
Q Consensus       831 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~  910 (1310)
                                                                                                      
T Consensus       114 --------------------------------------------------------------------------------  113 (270)
T d1t4ha_         114 --------------------------------------------------------------------------------  113 (270)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCC--ceecccCCCcEEEeecCCCcEE
Q psy5279         911 LEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRG--LCHLNIEPDNVVMASVRSVQVK  988 (1310)
Q Consensus       911 l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~g--IVHRDLKPeNILl~~~~~~~VK  988 (1310)
                                                           +..++.||+.||+|||++|  ||||||||+|||+++ .++.+|
T Consensus       114 -------------------------------------~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~-~~~~~K  155 (270)
T d1t4ha_         114 -------------------------------------LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG-PTGSVK  155 (270)
T ss_dssp             -------------------------------------HHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS-TTSCEE
T ss_pred             -------------------------------------HHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeC-CCCCEE
Confidence                                                 2345679999999999999  999999999999964 245799


Q ss_pred             EEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCC
Q psy5279         989 LIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus       989 L~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      |+|||+|+.....   ......|||.|||||++.+ .|+.++|||||||++|+|++|..||.+.
T Consensus       156 l~DFGla~~~~~~---~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~  215 (270)
T d1t4ha_         156 IGDLGLATLKRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC  215 (270)
T ss_dssp             ECCTTGGGGCCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             EeecCcceeccCC---ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCc
Confidence            9999999754322   1123467899999999875 5899999999999999999999999643

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8e-42  Score=383.51  Aligned_cols=99  Identities=26%  Similarity=0.398  Sum_probs=80.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC---C
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE---E 1024 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~---~ 1024 (1310)
                      +..++.||++||.|||++|||||||||+|||++.  ++.+||+|||+|+.....     ....|||.|||||++.+   .
T Consensus       117 ~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~--~~~~Kl~DFG~a~~~~~~-----~~~~GT~~Y~APE~~~~~~~~  189 (309)
T d1u5ra_         117 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE--PGLVKLGDFGSASIMAPA-----NSFVGTPYWMAPEVILAMDEG  189 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET--TTEEEECCCTTCBSSSSB-----CCCCSCGGGCCHHHHTTTTSC
T ss_pred             HHHHHHHHHHHHHHHHhCCEeccCCCcceEEECC--CCCEEEeecccccccCCC-----CccccCccccCHHHHhccCCC
Confidence            3445679999999999999999999999999985  567999999999765432     23468899999999864   3


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      .|+.++|||||||++|+|++|..||.+.+
T Consensus       190 ~y~~~~DiwSlGvilyel~~g~~Pf~~~~  218 (309)
T d1u5ra_         190 QYDGKVDVWSLGITCIELAERKPPLFNMN  218 (309)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             CcCchhhhhhHHHHHHHHHHCCCCCCCCC
Confidence            57778888888888888888888886543

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-41  Score=384.26  Aligned_cols=205  Identities=25%  Similarity=0.442  Sum_probs=172.1

Q ss_pred             CcchhhhhhccccchhhhHHHHhhccccceeeeeccc----CcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY----SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      +.|.++..|-+|.||.|.+|..+. |++.||.|++.-    +.+...++.+|...|+.|+|++|..++++|...    +.
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~-~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~----~~   79 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKA-TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH----DR   79 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS----SE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECC-CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccc----cc
Confidence            579999999999999999998776 899999999863    345678889999999999999999999999877    66


Q ss_pred             hhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccccccccc
Q psy5279         672 AVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWE  751 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  751 (1310)
                      ..+|||+|.|.++..++..+..++|+                                                      
T Consensus        80 ~~iv~ey~~gg~L~~~~~~~~~~~e~------------------------------------------------------  105 (337)
T d1o6la_          80 LCFVMEYANGGELFFHLSRERVFTEE------------------------------------------------------  105 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSCCCHH------------------------------------------------------
T ss_pred             cccceeccCCCchhhhhhcccCCcHH------------------------------------------------------
Confidence            78999999999987766433222222                                                      


Q ss_pred             CCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcchh
Q psy5279         752 DNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVI  831 (1310)
Q Consensus       752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  831 (1310)
                                                                                                      
T Consensus       106 --------------------------------------------------------------------------------  105 (337)
T d1o6la_         106 --------------------------------------------------------------------------------  105 (337)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEE
Q psy5279         832 RERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKL  911 (1310)
Q Consensus       832 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l  911 (1310)
                                                                                                      
T Consensus       106 --------------------------------------------------------------------------------  105 (337)
T d1o6la_         106 --------------------------------------------------------------------------------  105 (337)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEe
Q psy5279         912 EMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLID  991 (1310)
Q Consensus       912 ~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~D  991 (1310)
                                                         .+++++.||+.||+|||++|||||||||+|||++.  ++.+||+|
T Consensus       106 -----------------------------------~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~--~g~vkl~D  148 (337)
T d1o6la_         106 -----------------------------------RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK--DGHIKITD  148 (337)
T ss_dssp             -----------------------------------HHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT--TSCEEECC
T ss_pred             -----------------------------------HHHHHHHHHhhhhhhhhhcCccccccCHHHeEecC--CCCEEEee
Confidence                                               24556779999999999999999999999999985  46799999


Q ss_pred             eccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279         992 LGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus       992 FGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ||+|+.....+. .....+|||.|||||++.+.+|+.++|||||||++|+|++|.+||.+.+..++
T Consensus       149 FG~a~~~~~~~~-~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~  213 (337)
T d1o6la_         149 FGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL  213 (337)
T ss_dssp             CTTCBCSCCTTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             cccccccccCCc-ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHH
Confidence            999986543322 22334678999999999999999999999999999999999999988765443

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-41  Score=373.85  Aligned_cols=107  Identities=25%  Similarity=0.375  Sum_probs=81.2

Q ss_pred             HHHHHHHHHHHHHHHHHCC-----ceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCccccccccc
Q psy5279         948 DAYCVTSVLDGLQYLHWRG-----LCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLA 1022 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~g-----IVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~ 1022 (1310)
                      +..++.||+.||+|||++|     ||||||||+|||++.  ++.+||+|||+|+....... ......|||.|||||++.
T Consensus       111 ~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~--~~~vkl~DFG~a~~~~~~~~-~~~~~~gt~~Y~APE~l~  187 (269)
T d2java1         111 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG--KQNVKLGDFGLARILNHDTS-FAKAFVGTPYYMSPEQMN  187 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHCC---------CCGGGEEECT--TSCEEECCHHHHHHC------------CCCSCCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCC--CCcEEEeeccceeecccCCC-ccccCCCCcccCCHHHHc
Confidence            4566789999999999976     999999999999986  46799999999987643322 223346789999999999


Q ss_pred             CCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1023 EEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1023 ~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      +..|+.++|||||||++|+|++|..||.+.+..++
T Consensus       188 ~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~  222 (269)
T d2java1         188 RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL  222 (269)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             CCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHH
Confidence            99999999999999999999999999987655443

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.4e-40  Score=374.22  Aligned_cols=103  Identities=27%  Similarity=0.552  Sum_probs=88.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++|||||||||+|||++.  ++.+||+|||+|+......    ...+||+.|||||++.+.+|+.
T Consensus       107 ~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~--~g~vkL~DFG~a~~~~~~~----~~~~Gt~~Y~APE~l~~~~y~~  180 (316)
T d1fota_         107 KFYAAEVCLALEYLHSKDIIYRDLKPENILLDK--NGHIKITDFGFAKYVPDVT----YTLCGTPDYIAPEVVSTKPYNK  180 (316)
T ss_dssp             HHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT--TSCEEECCCSSCEECSSCB----CCCCSCTTTCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHhhhhhccCcEEccccCchheeEcC--CCCEEEecCccceEecccc----ccccCcccccCHHHHcCCCCCc
Confidence            455679999999999999999999999999985  4579999999998764322    2346889999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ++|||||||++|+|++|..||.+.+..++
T Consensus       181 ~~DiwSlGvilyemltG~~Pf~~~~~~~~  209 (316)
T d1fota_         181 SIDWWSFGILIYEMLAGYTPFYDSNTMKT  209 (316)
T ss_dssp             THHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             hhhccccchhHHHHHhCCCCCCCcCHHHH
Confidence            99999999999999999999987655443

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-39  Score=356.81  Aligned_cols=229  Identities=23%  Similarity=0.309  Sum_probs=177.6

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ||.++|++.+.||+|+||+||+|+++.+|+.||||++..... ...+.+.+|+.+|++|+|||||++++++.+++.+|||
T Consensus         2 Pf~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~iv   81 (271)
T d1nvra_           2 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   81 (271)
T ss_dssp             TTTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CCCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEE
Confidence            577899999999999999999999999999999999976532 3345688999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC--
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG--  336 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~--  336 (1310)
                      ||||+||+|++.+...+.+++.+++.+++||+.||+|||++|||||||||+|||++.++  .+||+|||+|+.+....  
T Consensus        82 mEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~--~~KL~DFG~a~~~~~~~~~  159 (271)
T d1nvra_          82 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRE  159 (271)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC--CEEECCCTTCEECEETTEE
T ss_pred             EeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCC--CEEEccchhheeeccCCcc
Confidence            99999999999998878899999999999999999999999999999999999998765  79999999999875432  


Q ss_pred             -CCCCcccchHHHhhh--------------------------cCCCccccCCCCCCC---CCCCcchhhhhhhcccchhh
Q psy5279         337 -KLNPLEYDVRYVRQA--------------------------LRHPWLNFADRKPTE---DTPKLNTDALRNYYNLYKDW  386 (1310)
Q Consensus       337 -~l~~~~~t~~yv~~~--------------------------~r~P~l~~~~~~~~~---~~p~~~~~~~~~~~~~~~D~  386 (1310)
                       ..++.+||+.|+++.                          +..||-...+.....   ............+...+.|.
T Consensus       160 ~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  239 (271)
T d1nvra_         160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL  239 (271)
T ss_dssp             CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred             ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHH
Confidence             345678888776642                          122332111000000   00000001111233344566


Q ss_pred             chhhhhhhcccCCCCCCccCCCcc
Q psy5279         387 YGNAAVRRYYRRRPLNSCYTHPSR  410 (1310)
Q Consensus       387 ~~~~~l~~~~~r~~~~~cl~hpw~  410 (1310)
                      +...+..+...|+|+++++.|||.
T Consensus       240 i~~~L~~dP~~R~t~~eil~hpwf  263 (271)
T d1nvra_         240 LHKILVENPSARITIPDIKKDRWY  263 (271)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred             HHHHcCCChhHCcCHHHHhcCHhh
Confidence            666667778999999999999996

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-41  Score=380.10  Aligned_cols=103  Identities=33%  Similarity=0.588  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC-CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR-SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~-~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||+|||++||+||||||+|||++... ...+||+|||+|+........  ....|||.|||||++.+..|+
T Consensus       114 ~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~y~  191 (335)
T d2ozaa1         114 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--TTPCYTPYYVAPEVLGPEKYD  191 (335)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCC--CCCSCCCSSCCCCCCCGGGGS
T ss_pred             HHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccCCCcc--ccccCCcccCCcHHHcCCCCC
Confidence            44567999999999999999999999999998643 467999999999876543332  334678999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      .++|||||||++|+|++|.+||.+.+
T Consensus       192 ~~~DiwSlGvily~lltg~~Pf~~~~  217 (335)
T d2ozaa1         192 KSCDMWSLGVIMYILLCGYPPFYSNH  217 (335)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCSCEETT
T ss_pred             HHHHHHhhchhHHHHhhCCCCCCCCC
Confidence            99999999999999999999997654

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-40  Score=379.60  Aligned_cols=201  Identities=22%  Similarity=0.368  Sum_probs=170.2

Q ss_pred             CcchhhhhhccccchhhhHHHHhhccccceeeeeccc----CcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccch
Q psy5279         596 DKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEY----SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNI  671 (1310)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  671 (1310)
                      |.|+.+..|-+|.||.|.+|..+. |++.||.|++.-    .......+..|...|++|+|++|..+++++...    +.
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~-~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----~~  115 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKE-SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN----SN  115 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS----SE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECC-CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccc----cc
Confidence            689999999999999999988776 899999999863    345567788999999999999999999999876    56


Q ss_pred             hhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccccccccc
Q psy5279         672 AVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWE  751 (1310)
Q Consensus       672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  751 (1310)
                      ..+|||++.|.++..++..+..++|+.                                                     
T Consensus       116 ~~~v~e~~~~g~l~~~l~~~~~l~e~~-----------------------------------------------------  142 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHLRRIGRFSEPH-----------------------------------------------------  142 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHHCCCCHHH-----------------------------------------------------
T ss_pred             cccccccccccchhhhHhhcCCCCHHH-----------------------------------------------------
Confidence            789999999999988776543333332                                                     


Q ss_pred             CCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcchh
Q psy5279         752 DNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVI  831 (1310)
Q Consensus       752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  831 (1310)
                                                                                                      
T Consensus       143 --------------------------------------------------------------------------------  142 (350)
T d1rdqe_         143 --------------------------------------------------------------------------------  142 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEE
Q psy5279         832 RERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKL  911 (1310)
Q Consensus       832 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l  911 (1310)
                                                                                                      
T Consensus       143 --------------------------------------------------------------------------------  142 (350)
T d1rdqe_         143 --------------------------------------------------------------------------------  142 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEe
Q psy5279         912 EMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLID  991 (1310)
Q Consensus       912 ~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~D  991 (1310)
                                                          +..++.||+.||.|||++|||||||||+|||++.  ++.+||+|
T Consensus       143 ------------------------------------~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~--~g~ikL~D  184 (350)
T d1rdqe_         143 ------------------------------------ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ--QGYIQVTD  184 (350)
T ss_dssp             ------------------------------------HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TSCEEECC
T ss_pred             ------------------------------------HHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCC--CCCEEeee
Confidence                                                3345679999999999999999999999999975  45799999


Q ss_pred             eccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhH
Q psy5279         992 LGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPE 1056 (1310)
Q Consensus       992 FGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e 1056 (1310)
                      ||+|+.+....    ....||+.|||||++.+.+|+.++|||||||++|+|++|.+||.+.+...
T Consensus       185 FG~a~~~~~~~----~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~  245 (350)
T d1rdqe_         185 FGFAKRVKGRT----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ  245 (350)
T ss_dssp             CTTCEECSSCB----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ceeeeeccccc----ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHH
Confidence            99998764321    23457899999999999999999999999999999999999998765443

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=2.4e-40  Score=365.87  Aligned_cols=261  Identities=22%  Similarity=0.364  Sum_probs=215.5

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcch----------hhhhhHHhhhhhhhc-hhhHHHHHHhcC
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDT----------LHQVNTEFDNLRSLR-HERIASLLEAYK  663 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~  663 (1310)
                      .++|.++..|-+|.||.|.+|..+. ++..+|.|++.-....          ..++..|...|++|+ |+||..+++.+.
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~-~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~   80 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKP-TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   80 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             cccCEEceEEecCcCeEEEEEEECC-CCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence            4789999999999999999997665 7899999998765422          346788999999998 999999999997


Q ss_pred             CCCcccchhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccc
Q psy5279         664 PSTTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTAN  743 (1310)
Q Consensus       664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (1310)
                      ..    +...||||+|.|.|+.++|..+..++|+.                                             
T Consensus        81 ~~----~~~~ivmE~~~~g~L~~~l~~~~~l~e~~---------------------------------------------  111 (277)
T d1phka_          81 TN----TFFFLVFDLMKKGELFDYLTEKVTLSEKE---------------------------------------------  111 (277)
T ss_dssp             CS----SEEEEEEECCTTCBHHHHHHHHSSCCHHH---------------------------------------------
T ss_pred             cC----cceEEEEEcCCCchHHHHHHhcCCCCHHH---------------------------------------------
Confidence            65    67789999999999998876544444333                                             


Q ss_pred             ccccccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCC
Q psy5279         744 LRDVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGH  823 (1310)
Q Consensus       744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  823 (1310)
                                                                                                      
T Consensus       112 --------------------------------------------------------------------------------  111 (277)
T d1phka_         112 --------------------------------------------------------------------------------  111 (277)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceee
Q psy5279         824 LDWKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITI  903 (1310)
Q Consensus       824 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~  903 (1310)
                                                                                                      
T Consensus       112 --------------------------------------------------------------------------------  111 (277)
T d1phka_         112 --------------------------------------------------------------------------------  111 (277)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeeCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecC
Q psy5279         904 PVVIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVR  983 (1310)
Q Consensus       904 ~l~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~  983 (1310)
                                                                  +..++.||+.||+|||++|||||||||+|||++.  
T Consensus       112 --------------------------------------------~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~--  145 (277)
T d1phka_         112 --------------------------------------------TRKIMRALLEVICALHKLNIVHRDLKPENILLDD--  145 (277)
T ss_dssp             --------------------------------------------HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--
T ss_pred             --------------------------------------------HHHHHHHHHHHHHHHHHcCCcccccccceEEEcC--
Confidence                                                        3445679999999999999999999999999975  


Q ss_pred             CCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhcc
Q psy5279         984 SVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNF 1063 (1310)
Q Consensus       984 ~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~ 1063 (1310)
                      +..+||+|||+++........  ....||+.|+|||++.+..                                      
T Consensus       146 ~~~~kl~DFG~a~~~~~~~~~--~~~~gt~~y~~PE~~~~~~--------------------------------------  185 (277)
T d1phka_         146 DMNIKLTDFGFSCQLDPGEKL--REVCGTPSYLAPEIIECSM--------------------------------------  185 (277)
T ss_dssp             TCCEEECCCTTCEECCTTCCB--CCCCSCGGGCCHHHHHHHH--------------------------------------
T ss_pred             CCCeEEccchheeEccCCCce--eeeeccCCCCCHHHhhccc--------------------------------------
Confidence            567999999999876543322  3346789999998753210                                      


Q ss_pred             ccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccccccccccccccccccccccCCcccCCCccccccccc
Q psy5279        1064 VRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHVKDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQ 1143 (1310)
Q Consensus      1064 ~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~q 1143 (1310)
                                                                                                      
T Consensus       186 --------------------------------------------------------------------------------  185 (277)
T d1phka_         186 --------------------------------------------------------------------------------  185 (277)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             chhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhcccccccccc-cchhccCHHHHHHHHHhhhcCCCCCC
Q psy5279        1144 APEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFE-YLFKELTQEATRFLMLIFKRAPGKRP 1222 (1310)
Q Consensus      1144 APEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~I~~~~~~f~-~~~~~iS~eAkdfI~~lL~~dP~kRp 1222 (1310)
                         .....+|+.++||||+||++|+||+|..||.+.+..+...+|....+.++ ..+..+|++++|||.+||+.||.+||
T Consensus       186 ---~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~  262 (277)
T d1phka_         186 ---NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY  262 (277)
T ss_dssp             ---CTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSC
T ss_pred             ---cccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCc
Confidence               00012477889999999999999999999999999998888988887764 45778999999999999999999999


Q ss_pred             CHHHhhcCCccC
Q psy5279        1223 TVEECHENRWLV 1234 (1310)
Q Consensus      1223 Ta~e~L~HpWl~ 1234 (1310)
                      |++|+|+||||.
T Consensus       263 s~~eil~h~~~~  274 (277)
T d1phka_         263 TAEEALAHPFFQ  274 (277)
T ss_dssp             CHHHHTTSGGGC
T ss_pred             CHHHHHcCHHHH
Confidence            999999999985

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-38  Score=350.55  Aligned_cols=231  Identities=24%  Similarity=0.367  Sum_probs=181.7

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ...++|++.+.||+|+||+||+|.++.+|+.||||++........+.+.+|+.+|++++|||||+++++|.+++.+||||
T Consensus        17 dp~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   96 (293)
T d1yhwa1          17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (293)
T ss_dssp             CTTTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEE
Confidence            34678999999999999999999999999999999998665556678999999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l  338 (1310)
                      |||+||+|.+.+.+ +.+++.+++.+++||+.||+|||++|||||||||+|||++.++  ++||+|||+|+.+.... ..
T Consensus        97 Ey~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~--~vkl~DFG~a~~~~~~~~~~  173 (293)
T d1yhwa1          97 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKLTDFGFCAQITPEQSKR  173 (293)
T ss_dssp             ECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEECCCTTCEECCSTTCCB
T ss_pred             EecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCC--cEeeccchhheeeccccccc
Confidence            99999999987765 5799999999999999999999999999999999999998765  79999999999876543 44


Q ss_pred             CCcccchHHHhhh-------------------------cCCCccccCCCCCC-----CCCCCcchhhhhhhcccchhhch
Q psy5279         339 NPLEYDVRYVRQA-------------------------LRHPWLNFADRKPT-----EDTPKLNTDALRNYYNLYKDWYG  388 (1310)
Q Consensus       339 ~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~-----~~~p~~~~~~~~~~~~~~~D~~~  388 (1310)
                      ...+||+.|+++.                         +..||.........     ...+..  .....+...++|++.
T Consensus       174 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~li~  251 (293)
T d1yhwa1         174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDFLN  251 (293)
T ss_dssp             CCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCC--SSGGGSCHHHHHHHH
T ss_pred             cccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCC--CCcccCCHHHHHHHH
Confidence            5667888776542                         22233211100000     000000  000122334567777


Q ss_pred             hhhhhhcccCCCCCCccCCCcceecCC
Q psy5279         389 NAAVRRYYRRRPLNSCYTHPSRMIYPP  415 (1310)
Q Consensus       389 ~~~l~~~~~r~~~~~cl~hpw~~~~~~  415 (1310)
                      ..+..+...|+++++++.|||+....|
T Consensus       252 ~~L~~dP~~R~s~~eil~Hp~~~~~~~  278 (293)
T d1yhwa1         252 RCLDMDVEKRGSAKELLQHQFLKIAKP  278 (293)
T ss_dssp             HHTCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHccCChhHCcCHHHHhcCHhhCCCCC
Confidence            777788999999999999999854333

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-39  Score=359.83  Aligned_cols=109  Identities=26%  Similarity=0.387  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ...++.||+.||+|||++|||||||||+|||++.  .+.+||+|||+++......  ......||+.|||||++.+.+|+
T Consensus       118 ~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~--~~~~kl~dfg~~~~~~~~~--~~~~~~gT~~Y~APE~~~~~~y~  193 (305)
T d1blxa_         118 IKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYA  193 (305)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TCCEEECSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcC--CCCeeecchhhhhhhcccc--cCCCcccChhhcCcchhcCCCCC
Confidence            4567889999999999999999999999999985  4579999999987543322  23345688999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~ 1060 (1310)
                      .++||||+||++|+|++|.+||.+.+..+...+
T Consensus       194 ~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~  226 (305)
T d1blxa_         194 TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK  226 (305)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             hhehhhchHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            999999999999999999999998876655443

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-39  Score=358.90  Aligned_cols=110  Identities=22%  Similarity=0.319  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      +..+++||+.||+|||++||+||||||+|||++.  .+.+||+|||+|+........ .....||+.|||||++.+. .|
T Consensus       102 ~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~--~~~~KL~DFG~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~  178 (299)
T d1ua2a_         102 IKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDE--NGVLKLADFGLAKSFGSPNRA-YTHQVVTRWYRAPELLFGARMY  178 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TCCEEECCCGGGSTTTSCCCC-CCCSCCCCTTCCHHHHTTCSCC
T ss_pred             HHHHHHHHHHHHHHhhccceecccCCcceEEecC--CCccccccCccccccCCCccc-ccceecChhhccHHHHccCCCC
Confidence            4566789999999999999999999999999985  567999999999765432222 2234578999999998754 67


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHHhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1060 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~ 1060 (1310)
                      +.++|||||||++|+|++|.+||.+.+..+...+
T Consensus       179 ~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~  212 (299)
T d1ua2a_         179 GVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTR  212 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             ChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHH
Confidence            8999999999999999999999998877665443

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-39  Score=366.34  Aligned_cols=106  Identities=30%  Similarity=0.543  Sum_probs=90.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  .+.+||+|||+++....... ......||+.|+|||++.+.+|+.
T Consensus       106 ~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~--~~~~kl~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~  182 (320)
T d1xjda_         106 TFYAAEIILGLQFLHSKGIVYRDLKLDNILLDK--DGHIKIADFGMCKENMLGDA-KTNTFCGTPDYIAPEILLGQKYNH  182 (320)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT--TSCEEECCCTTCBCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHhCCeeeccCcccceeecC--CCceeccccchhhhcccccc-cccccCCCCCcCCHHHHcCCCCCc
Confidence            345679999999999999999999999999985  46799999999976543222 223346889999999999999999


Q ss_pred             ccchhHHHHHHHHHhcCCCCCCCCChhHH
Q psy5279        1029 QTDVWSAGVLAYVLLSGASPFRGQSEPET 1057 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG~~PF~g~~~~e~ 1057 (1310)
                      ++|||||||++|+|++|..||.+.+..++
T Consensus       183 ~~DiwSlGvilyemltG~~PF~~~~~~~~  211 (320)
T d1xjda_         183 SVDWWSFGVLLYEMLIGQSPFHGQDEEEL  211 (320)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             hhhhhhhhHHHHHHHhCCCCCCCCCHHHH
Confidence            99999999999999999999988765544

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2.3e-38  Score=361.34  Aligned_cols=233  Identities=27%  Similarity=0.428  Sum_probs=186.1

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .+.++|++.+.||+|+||+||+|.++.+|+.||||+++.........+.+|+.+|++|+|||||+++++|.+++.+||||
T Consensus        26 ~~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm  105 (352)
T d1koba_          26 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL  105 (352)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CcccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            56788999999999999999999999999999999998766556677889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      |||+||+|++.+...+ .+++.+++.++.||+.||+|||++|||||||||+||||+......|||+|||+|+.+......
T Consensus       106 E~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~  185 (352)
T d1koba_         106 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV  185 (352)
T ss_dssp             ECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred             EcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence            9999999999887654 599999999999999999999999999999999999998555568999999999998776666


Q ss_pred             CCcccchHHHhhh-------------------------cCCCccccCCCCC----CCCCCCcchhhhhhhcccchhhchh
Q psy5279         339 NPLEYDVRYVRQA-------------------------LRHPWLNFADRKP----TEDTPKLNTDALRNYYNLYKDWYGN  389 (1310)
Q Consensus       339 ~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~~D~~~~  389 (1310)
                      .+.++|+.|+++.                         ++.||-.......    ....+.+.......+...++|++..
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  265 (352)
T d1koba_         186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN  265 (352)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHT
T ss_pred             eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHH
Confidence            6667777665532                         3334422110000    0000011111122334455777777


Q ss_pred             hhhhhcccCCCCCCccCCCccee
Q psy5279         390 AAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       390 ~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      .+..+...|+|+++++.|||+..
T Consensus       266 ~L~~dp~~R~s~~eil~Hp~~~~  288 (352)
T d1koba_         266 LLQKEPRKRLTVHDALEHPWLKG  288 (352)
T ss_dssp             TSCSSGGGSCCHHHHHTSTTTSS
T ss_pred             HccCChhHCcCHHHHhcCHhhCC
Confidence            78888999999999999999743

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.5e-39  Score=372.73  Aligned_cols=99  Identities=26%  Similarity=0.443  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccC-CCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAE-EPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~-~~ys 1027 (1310)
                      ..++.||+.||+|||++|||||||||+|||++.  .+.+||+|||+|+......   .....||+.|||||++.. ..|+
T Consensus       110 ~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~--~g~iKl~DFGla~~~~~~~---~~~~~GT~~y~APE~~~~~~~~~  184 (364)
T d1omwa3         110 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDE--HGHVRISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGVAYD  184 (364)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS--SSCEEECCCTTCEECSSSC---CCSCCSCGGGCCHHHHSTTCCCC
T ss_pred             HHHHHHHHHHHHHHHHCCccceeeccceeEEcC--CCcEEEeeeceeeecCCCc---ccccccccccchhHHhhcCCCCC
Confidence            345679999999999999999999999999975  4579999999998765322   223468899999999864 5688


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|||||||++|+|++|..||.+.
T Consensus       185 ~~~DiwSlGvilyemltG~~Pf~~~  209 (364)
T d1omwa3         185 SSADWFSLGCMLFKLLRGHSPFRQH  209 (364)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred             cccchhHHHHHHHHHHhCCCCCCCC
Confidence            8999999999999999999998653

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-38  Score=345.80  Aligned_cols=233  Identities=27%  Similarity=0.467  Sum_probs=185.8

Q ss_pred             CccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc------chHHHHHHHHHHHHhcCCCCcceEEEEEEeC
Q psy5279         179 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN------QYKSLFKNELDIMNQLCHRNLVRLHDSYETK  252 (1310)
Q Consensus       179 ~~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~------~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~  252 (1310)
                      ..+.++|++.+.||+|+||+||+|+++.||+.||||++.+...      ...+.+.+|+.+|++|+|||||+++++|.++
T Consensus         6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~   85 (293)
T d1jksa_           6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK   85 (293)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             CCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            3578899999999999999999999999999999999975421      2357789999999999999999999999999


Q ss_pred             CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCC--CeEEEEeeccce
Q psy5279         253 DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGG--RHLLLTDFGLSR  330 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~--~~VKLsDFGLAr  330 (1310)
                      +.+|||||||+||+|.+.+...+.+++.+++.+++||+.||+|||++||+||||||+|||++.++.  ..+||+|||+|+
T Consensus        86 ~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~  165 (293)
T d1jksa_          86 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH  165 (293)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             CEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhh
Confidence            999999999999999999988888999999999999999999999999999999999999986653  369999999999


Q ss_pred             eecCCCCCCCcccchHHHhhh-------------------------cCCCccccCCCCC----CCCCCCcchhhhhhhcc
Q psy5279         331 RITSFGKLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKP----TEDTPKLNTDALRNYYN  381 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~  381 (1310)
                      .+.......+.++|+.|+++.                         +..||........    ......+......++..
T Consensus       166 ~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  245 (293)
T d1jksa_         166 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA  245 (293)
T ss_dssp             ECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCH
T ss_pred             hcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCH
Confidence            987776677777887776542                         2223321110000    00001111122223344


Q ss_pred             cchhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         382 LYKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       382 ~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      .+.|++...+..+..+|+++++++.|||..
T Consensus       246 ~~~~li~~~L~~dP~~R~s~~eil~hp~~~  275 (293)
T d1jksa_         246 LAKDFIRRLLVKDPKKRMTIQDSLQHPWIK  275 (293)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHSTTTC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence            456777777777899999999999999974

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=3.6e-38  Score=359.56  Aligned_cols=233  Identities=25%  Similarity=0.401  Sum_probs=185.0

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .+-++|++.+.||+|+||+||+|+++.+|+.||||++........+.+.+|+.+|++|+|||||+++++|.+++.+||||
T Consensus        23 ~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm  102 (350)
T d1koaa2          23 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY  102 (350)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            45678999999999999999999999999999999998766666778899999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      |||+||+|++.+.. .+.+++.+++.+++||+.||+|||++|||||||||+|||++.+.+..+||+|||+|+.+......
T Consensus       103 E~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~  182 (350)
T d1koaa2         103 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV  182 (350)
T ss_dssp             CCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCE
T ss_pred             EcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheeccccccc
Confidence            99999999999854 45699999999999999999999999999999999999998655568999999999998776666


Q ss_pred             CCcccchHHHhhh-------------------------cCCCccccCCCCCC----CCCCCcchhhhhhhcccchhhchh
Q psy5279         339 NPLEYDVRYVRQA-------------------------LRHPWLNFADRKPT----EDTPKLNTDALRNYYNLYKDWYGN  389 (1310)
Q Consensus       339 ~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~----~~~p~~~~~~~~~~~~~~~D~~~~  389 (1310)
                      .+.+||+.|+++.                         ++.||-........    ...+.........+...++|++..
T Consensus       183 ~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  262 (350)
T d1koaa2         183 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK  262 (350)
T ss_dssp             EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHH
T ss_pred             ceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHH
Confidence            6667777665432                         23333211100000    000001111112333445677777


Q ss_pred             hhhhhcccCCCCCCccCCCccee
Q psy5279         390 AAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       390 ~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      .+..+..+|+|+++++.|||+..
T Consensus       263 ~L~~dP~~R~t~~eil~hp~~~~  285 (350)
T d1koaa2         263 LLLADPNTRMTIHQALEHPWLTP  285 (350)
T ss_dssp             HCCSSGGGSCCHHHHHHSTTTSC
T ss_pred             HccCChhHCcCHHHHhcCcccCC
Confidence            77788999999999999999854

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.5e-38  Score=354.47  Aligned_cols=233  Identities=26%  Similarity=0.387  Sum_probs=166.1

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .+.+.|++.+.||+|+||+||+|.++.||+.||||++.+... .....+.+|+.+|++|+|||||+++++|.+++.+|||
T Consensus         6 di~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv   85 (307)
T d1a06a_           6 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLI   85 (307)
T ss_dssp             CGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            577899999999999999999999999999999999976532 2345678999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC-CCCeEEEEeeccceeecCCCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP-GGRHLLLTDFGLSRRITSFGK  337 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~-~~~~VKLsDFGLAr~i~~~~~  337 (1310)
                      ||||+||+|.+.+...+.+++.+++.++.||+.||+|||++|||||||||+|||+... .+..+||+|||+|+.......
T Consensus        86 mE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~  165 (307)
T d1a06a_          86 MQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV  165 (307)
T ss_dssp             ECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-----------
T ss_pred             EeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCe
Confidence            9999999999999888889999999999999999999999999999999999999642 235899999999998877666


Q ss_pred             CCCcccchHHHhhh-------------------------cCCCccccCCCCC----CCCCCCcchhhhhhhcccchhhch
Q psy5279         338 LNPLEYDVRYVRQA-------------------------LRHPWLNFADRKP----TEDTPKLNTDALRNYYNLYKDWYG  388 (1310)
Q Consensus       338 l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~~D~~~  388 (1310)
                      ..+.+||+.|+++.                         +..||........    .............++...+.|++.
T Consensus       166 ~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  245 (307)
T d1a06a_         166 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR  245 (307)
T ss_dssp             -------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHH
T ss_pred             eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHH
Confidence            77778887776542                         2223321110000    000000111111223344567777


Q ss_pred             hhhhhhcccCCCCCCccCCCccee
Q psy5279         389 NAAVRRYYRRRPLNSCYTHPSRMI  412 (1310)
Q Consensus       389 ~~~l~~~~~r~~~~~cl~hpw~~~  412 (1310)
                      ..+..+...|+|+++++.|||+..
T Consensus       246 ~~L~~dP~~R~s~~eil~hp~~~~  269 (307)
T d1a06a_         246 HLMEKDPEKRFTCEQALQHPWIAG  269 (307)
T ss_dssp             HHSCSSGGGSCCHHHHHHSTTTTS
T ss_pred             HHccCCHhHCcCHHHHhcCHhhCC
Confidence            777788999999999999999853

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-38  Score=349.24  Aligned_cols=224  Identities=24%  Similarity=0.347  Sum_probs=176.6

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|++.+.||+|+||+||+|+++.+|+.||+|++.+..   ......+.+|+.+|++++|||||+++++|.+++.+||||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            57999999999999999999999999999999997432   234567889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN  339 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~  339 (1310)
                      |||+||+|.+.+...+.+++.+++.++.||+.||+|||++|||||||||+|||++.++  .+||+|||+|+..... ...
T Consensus        86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~--~~kl~DFG~a~~~~~~-~~~  162 (263)
T d2j4za1          86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--ELKIADFGWSVHAPSS-RRT  162 (263)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--CEEECCCCSCSCCCCC-CCE
T ss_pred             eecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCC--CEeecccceeeecCCC-ccc
Confidence            9999999999998888899999999999999999999999999999999999998765  7999999999876543 345


Q ss_pred             CcccchHHHhhhcC--CCc------ccc--------CCCCCCCCCCCcchhhhh-----------hhcccchhhchhhhh
Q psy5279         340 PLEYDVRYVRQALR--HPW------LNF--------ADRKPTEDTPKLNTDALR-----------NYYNLYKDWYGNAAV  392 (1310)
Q Consensus       340 ~~~~t~~yv~~~~r--~P~------l~~--------~~~~~~~~~p~~~~~~~~-----------~~~~~~~D~~~~~~l  392 (1310)
                      ..+||+.|+++...  .+.      +.+        ....| +. .....+.+.           .+...++|++...+.
T Consensus       163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~P-f~-~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~  240 (263)
T d2j4za1         163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP-FE-ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK  240 (263)
T ss_dssp             ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCT-TC-CSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHTC
T ss_pred             ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCC-CC-CCCHHHHHHHHHcCCCCCCccCCHHHHHHHHHHcc
Confidence            56788877664211  110      000        01111 11 000111111           122334666777777


Q ss_pred             hhcccCCCCCCccCCCcce
Q psy5279         393 RRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       393 ~~~~~r~~~~~cl~hpw~~  411 (1310)
                      .+..+|+|+++++.|||++
T Consensus       241 ~dp~~R~t~~eil~hp~~~  259 (263)
T d2j4za1         241 HNPSQRPMLREVLEHPWIT  259 (263)
T ss_dssp             SSGGGSCCHHHHHTCHHHH
T ss_pred             CCHhHCcCHHHHHcCcCcC
Confidence            7889999999999999974

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-38  Score=352.18  Aligned_cols=231  Identities=23%  Similarity=0.414  Sum_probs=184.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .+.++|++.+.||+|+||+||+|.++.||+.||||+++... .....+.+|+.+|+.++|||||+++++|++++.+||||
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvm   80 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF   80 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            57789999999999999999999999999999999997653 33456889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      |||+||+|++.+...+ .++|.+++.++.||+.||+|||++||+||||||+|||++.++...|||+|||+|+........
T Consensus        81 E~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~  160 (321)
T d1tkia_          81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred             ecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCcc
Confidence            9999999999997665 699999999999999999999999999999999999998766678999999999987665544


Q ss_pred             CCcccchHHHh-------------------------hhcCCCccccCCCCC----CCCCCCcchhhhhhhcccchhhchh
Q psy5279         339 NPLEYDVRYVR-------------------------QALRHPWLNFADRKP----TEDTPKLNTDALRNYYNLYKDWYGN  389 (1310)
Q Consensus       339 ~~~~~t~~yv~-------------------------~~~r~P~l~~~~~~~----~~~~p~~~~~~~~~~~~~~~D~~~~  389 (1310)
                      .+.++|+.|++                         ..+..||........    ......+.......+...++|++..
T Consensus       161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  240 (321)
T d1tkia_         161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR  240 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHT
T ss_pred             cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHH
Confidence            45556655443                         234445532110000    0000111222223344556788888


Q ss_pred             hhhhhcccCCCCCCccCCCcce
Q psy5279         390 AAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       390 ~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      .+..+...|+++++++.|||..
T Consensus       241 ~L~~dp~~R~s~~eil~hp~~~  262 (321)
T d1tkia_         241 LLVKERKSRMTASEALQHPWLK  262 (321)
T ss_dssp             TSCSSGGGSCCHHHHHHSHHHH
T ss_pred             HccCChhHCcCHHHHhcCHhhc
Confidence            8888899999999999999974

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-39  Score=357.76  Aligned_cols=99  Identities=23%  Similarity=0.387  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC-
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF- 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys- 1027 (1310)
                      ..++.||+.||+|||++|||||||||+|||++.+ ...+||+|||+|+.....   ......||+.|||||++.+..+. 
T Consensus       113 ~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~-~~~vkl~DFG~a~~~~~~---~~~~~~GT~~y~aPE~~~~~~~~~  188 (273)
T d1xwsa_         113 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN-RGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHG  188 (273)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCH
T ss_pred             HHHHHHHHHHHHHHHHCCCccccCcccceEEecC-CCeEEECccccceecccc---cccccccCCCcCCHHHHcCCCCCC
Confidence            3456699999999999999999999999999742 357999999999765322   12334688999999999877664 


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      .++|||||||++|+|++|..||.+
T Consensus       189 ~~~DiwSlGvilyell~g~~Pf~~  212 (273)
T d1xwsa_         189 RSAAVWSLGILLYDMVCGDIPFEH  212 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             cccccccceeeehhHhhCCCCCCC
Confidence            668999999999999999999854

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-39  Score=355.52  Aligned_cols=108  Identities=21%  Similarity=0.334  Sum_probs=89.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCC-
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPI- 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~y- 1026 (1310)
                      +..++.||+.||+|||++|||||||||+|||++.  +..+||+|||+|+....... ......||+.|+|||++....+ 
T Consensus       104 ~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~--~~~~kl~DFG~a~~~~~~~~-~~~~~~gt~~y~apE~~~~~~~~  180 (298)
T d1gz8a_         104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPEILLGCKYY  180 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT--TSCEEECSTTHHHHHCCCSB-CTTCCBCCCTTCCHHHHTTCSSC
T ss_pred             HHHHHHHHHHHHHHhhcCCEEccccCchheeecc--cCcceeccCCcceeccCCcc-cceeecccceeeehhhhccccCC
Confidence            5667889999999999999999999999999975  45799999999976543222 2233457899999999887765 


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      +.++|+||+||++|+|++|+.||.+.+..+..
T Consensus       181 ~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~  212 (298)
T d1gz8a_         181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQL  212 (298)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             CccccccccchhhhHHhhCCCCCCCCCHHHHH
Confidence            68899999999999999999999987765543

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-37  Score=343.99  Aligned_cols=227  Identities=24%  Similarity=0.360  Sum_probs=176.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ..|.|++.+.||+|+||+||+|+++.+|+.||||++........+.+.+|+++|++|+|||||+++++|.+++.+|||||
T Consensus        10 p~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmE   89 (288)
T d2jfla1          10 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE   89 (288)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEe
Confidence            34789999999999999999999999999999999987666666778899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CCC
Q psy5279         261 LAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GKL  338 (1310)
Q Consensus       261 y~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~l  338 (1310)
                      ||+||+|.+.+.+ .+.+++.+++.++.||+.||+|||++|||||||||+|||++.++  .+||+|||+|+..... ...
T Consensus        90 y~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~--~~Kl~DFG~a~~~~~~~~~~  167 (288)
T d2jfla1          90 FCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG--DIKLADFGVSAKNTRTIQRR  167 (288)
T ss_dssp             CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEEECCCTTCEECHHHHHHH
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCC--CEEEEechhhhccCCCcccc
Confidence            9999999998765 45699999999999999999999999999999999999998765  7999999999876432 122


Q ss_pred             CCcccchHHHhhh------------------------------cCCCccccCCCCCC-----CCCCCcchhhhhhhcccc
Q psy5279         339 NPLEYDVRYVRQA------------------------------LRHPWLNFADRKPT-----EDTPKLNTDALRNYYNLY  383 (1310)
Q Consensus       339 ~~~~~t~~yv~~~------------------------------~r~P~l~~~~~~~~-----~~~p~~~~~~~~~~~~~~  383 (1310)
                      .+.+||+.|+++.                              ++.||-........     ...|..  .....+...+
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~~s~~~  245 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL--AQPSRWSSNF  245 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCC--SSGGGSCHHH
T ss_pred             cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC--CccccCCHHH
Confidence            3345555554432                              22333221100000     000000  0011223445


Q ss_pred             hhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         384 KDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       384 ~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +|++...+..+..+|+|+++++.|||++
T Consensus       246 ~~li~~~L~~dp~~R~t~~ell~hp~~~  273 (288)
T d2jfla1         246 KDFLKKCLEKNVDARWTTSQLLQHPFVT  273 (288)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTSGGGC
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCcccC
Confidence            6777777777899999999999999974

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.3e-38  Score=348.26  Aligned_cols=109  Identities=22%  Similarity=0.378  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      +..++.||+.||+|||++|||||||||+|||++.  ++.+||+|||+|........ ......+++.|+|||++.+. .+
T Consensus       102 ~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~--~~~~kl~DfG~a~~~~~~~~-~~~~~~~~~~y~~pE~~~~~~~~  178 (286)
T d1ob3a_         102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR--EGELKIADFGLARAFGIPVR-KYTHEIVTLWYRAPDVLMGSKKY  178 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT--TSCEEECCTTHHHHHCC----------CCCTTCCHHHHTTCCSC
T ss_pred             hHHHHHHHHHHHHHhccCcEEecCCCCceeeEcC--CCCEEecccccceecccCcc-ccceecccchhhhHHHHhCCCCC
Confidence            4456789999999999999999999999999975  56799999999876543222 12233467999999999765 56


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      +.++||||+||++|+|++|++||.+.+..+...
T Consensus       179 ~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~  211 (286)
T d1ob3a_         179 STTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM  211 (286)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             CcceeehhcCcHHHHHHHCCCCCCCCCHHHHHH
Confidence            899999999999999999999999877655543

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-38  Score=354.60  Aligned_cols=106  Identities=23%  Similarity=0.470  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      +..++.||+.||+|||++|||||||||+|||++.  +..+|++|||+|+......    ....||+.|+|||++.+. .+
T Consensus       123 ~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~--~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~  196 (346)
T d1cm8a_         123 IQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE--DCELKILDFGLARQADSEM----TGYVVTRWYRAPEVILNWMRY  196 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--TCCEEECCCTTCEECCSSC----CSSCSCGGGCCTHHHHTTTCC
T ss_pred             HHHHHHHHHHHHHHHHhCCCcccccCcchhhccc--ccccccccccceeccCCcc----ccccccccccCHHHHcCCCCC
Confidence            3456789999999999999999999999999985  5679999999998654321    234578999999999865 56


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      +.++||||+||++|+|++|.+||.+.+......
T Consensus       197 ~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~  229 (346)
T d1cm8a_         197 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK  229 (346)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             CccchhhcchHHHHHHHHCcCCCCCCChHHHHH
Confidence            889999999999999999999999887655443

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-37  Score=350.04  Aligned_cols=166  Identities=22%  Similarity=0.363  Sum_probs=145.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ..++|++.+.||+|+||+||+|.++.||+.||+|+++... ......+.+|+.+|++|+|||||+++++|.+++.+||||
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm   83 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   83 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            4578999999999999999999999999999999997643 344667899999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      |||+||+|.+.+.+.+.+++..++.++.||+.||+|||+ +||+||||||+|||++.++  .+||+|||+|+.+... ..
T Consensus        84 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~--~vkl~DFGla~~~~~~-~~  160 (322)
T d1s9ja_          84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDS-MA  160 (322)
T ss_dssp             ECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTC--CEEECCCCCCHHHHHH-TC
T ss_pred             EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCC--CEEEeeCCCccccCCC-cc
Confidence            999999999999888889999999999999999999997 5999999999999998765  7999999999976442 33


Q ss_pred             CCcccchHHHh
Q psy5279         339 NPLEYDVRYVR  349 (1310)
Q Consensus       339 ~~~~~t~~yv~  349 (1310)
                      ++.+||+.|++
T Consensus       161 ~~~~GT~~Y~A  171 (322)
T d1s9ja_         161 NSFVGTRSYMS  171 (322)
T ss_dssp             ---CCSSCCCC
T ss_pred             ccccCCccccC
Confidence            45566665544

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-37  Score=344.39  Aligned_cols=216  Identities=23%  Similarity=0.355  Sum_probs=172.9

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      .++|++.+.||+|+||+||+|.++.||+.||||++.+..   ....+.+.+|+.+|++|+|||||+++++|.+++.+|||
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv   86 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG   86 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEE
T ss_pred             CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEE
Confidence            367999999999999999999999999999999997532   23346688999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC--
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG--  336 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~--  336 (1310)
                      ||||+||+|.+.+...+.+++.+++.++.||+.||+|||++|||||||||+|||++.++  .+||+|||+|+.+....  
T Consensus        87 mEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~--~vkl~DFG~a~~~~~~~~~  164 (288)
T d1uu3a_          87 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQ  164 (288)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS--CEEECCCTTCEECC-----
T ss_pred             EEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCc--eEEecccccceecccCCcc
Confidence            99999999999998888999999999999999999999999999999999999998765  79999999999875432  


Q ss_pred             -CCCCcccchHHHhhh-------------------------cCCCccccCCCCCCCCCCCcchhhh-----------hhh
Q psy5279         337 -KLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKPTEDTPKLNTDAL-----------RNY  379 (1310)
Q Consensus       337 -~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~~~~p~~~~~~~-----------~~~  379 (1310)
                       ...+.+||+.|+++.                         +..||-...           ..+.+           ..+
T Consensus       165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-----------~~~~~~~i~~~~~~~p~~~  233 (288)
T d1uu3a_         165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-----------EYLIFQKIIKLEYDFPEKF  233 (288)
T ss_dssp             -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----------HHHHHHHHHTTCCCCCTTC
T ss_pred             cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcC-----------HHHHHHHHHcCCCCCCccC
Confidence             345567888776642                         223332111           00111           122


Q ss_pred             cccchhhchhhhhhhcccCCCCCCc------cCCCcc
Q psy5279         380 YNLYKDWYGNAAVRRYYRRRPLNSC------YTHPSR  410 (1310)
Q Consensus       380 ~~~~~D~~~~~~l~~~~~r~~~~~c------l~hpw~  410 (1310)
                      +..++|.+...+..+...|+|++++      +.|||.
T Consensus       234 s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff  270 (288)
T d1uu3a_         234 FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF  270 (288)
T ss_dssp             CHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGG
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCcc
Confidence            3445677777777889999999985      567775

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=2.5e-38  Score=354.41  Aligned_cols=104  Identities=22%  Similarity=0.388  Sum_probs=86.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      +..+++||+.||+|||++|||||||||+|||++.. ...+||+|||+|+........  ....+|+.|+|||++.+. .|
T Consensus       131 i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~-~~~vkl~DFG~a~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~  207 (328)
T d3bqca1         131 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYHPGQEY--NVRVASRYFKGPELLVDYQMY  207 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT-TTEEEECCGGGCEECCTTCCC--CSCCSCGGGCCHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHHHHhhcccccccccccceEEcCC-CCeeeecccccceeccCCCcc--cccccCccccCcccccCCCCC
Confidence            34567899999999999999999999999999853 346999999999876543322  234567999999998875 47


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCCh
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSE 1054 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~ 1054 (1310)
                      +.++||||+||++|+|++|..||.....
T Consensus       208 ~~~~DiwslG~~l~e~~~g~~pf~~~~~  235 (328)
T d3bqca1         208 DYSLDMWSLGCMLASMIFRKEPFFHGHD  235 (328)
T ss_dssp             CTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred             CcccchhhhhhhhHHhccCCCCCCCCch
Confidence            8999999999999999999999976543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-38  Score=354.17  Aligned_cols=211  Identities=21%  Similarity=0.353  Sum_probs=165.8

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeecccC--cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccchh
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS--HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASNIA  672 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  672 (1310)
                      +++|+.++.|-+|-||.|.+|..+. |+..||.|.+.-.  .....++..|+..|++|+|++|..++.++...+......
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~   85 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNV-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD   85 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETT-TCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECC-CCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence            4679999999999999999998887 8899999998633  334567889999999999999999999998887655555


Q ss_pred             hHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccccccccC
Q psy5279         673 VLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTWED  752 (1310)
Q Consensus       673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  752 (1310)
                      +++||+|.|.++.+++..+ .++|+.                                                      
T Consensus        86 ~~l~~~~~~g~L~~~l~~~-~l~~~~------------------------------------------------------  110 (345)
T d1pmea_          86 VYLVTHLMGADLYKLLKTQ-HLSNDH------------------------------------------------------  110 (345)
T ss_dssp             EEEEEECCCEEHHHHHHHC-CCCHHH------------------------------------------------------
T ss_pred             EEEEEeecCCchhhhhhcC-CCCHHH------------------------------------------------------
Confidence            5667778899988777432 233222                                                      


Q ss_pred             CCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcchhh
Q psy5279         753 NVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPVIR  832 (1310)
Q Consensus       753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  832 (1310)
                                                                                                      
T Consensus       111 --------------------------------------------------------------------------------  110 (345)
T d1pmea_         111 --------------------------------------------------------------------------------  110 (345)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCEEE
Q psy5279         833 ERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDKLE  912 (1310)
Q Consensus       833 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~l~  912 (1310)
                                                                                                      
T Consensus       111 --------------------------------------------------------------------------------  110 (345)
T d1pmea_         111 --------------------------------------------------------------------------------  110 (345)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEee
Q psy5279         913 MKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDL  992 (1310)
Q Consensus       913 ~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DF  992 (1310)
                                                         ...++.||+.||+|||++|||||||||+|||++.  ++.+||+||
T Consensus       111 -----------------------------------i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~--~~~~kl~Df  153 (345)
T d1pmea_         111 -----------------------------------ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDF  153 (345)
T ss_dssp             -----------------------------------HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--TCCEEECCC
T ss_pred             -----------------------------------HHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECC--CCCEEEccc
Confidence                                               2345679999999999999999999999999985  467999999


Q ss_pred             ccceeeccCCc--ccccCCCCCCcccccccccC-CCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHH
Q psy5279         993 GCTQRVTKLGT--LIHPINTPNPEFAAPEVLAE-EPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETR 1058 (1310)
Q Consensus       993 GlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~-~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~ 1058 (1310)
                      |+|+.......  .......||+.|+|||++.. ..|+.++||||+||++|+|++|..||.+.+..+..
T Consensus       154 G~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~  222 (345)
T d1pmea_         154 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL  222 (345)
T ss_dssp             TTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             CceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHH
Confidence            99976543221  11233457899999999855 46788999999999999999999999887765543

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=9.1e-37  Score=337.07  Aligned_cols=229  Identities=25%  Similarity=0.407  Sum_probs=180.7

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---------chHHHHHHHHHHHHhcC-CCCcceEEEEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---------QYKSLFKNELDIMNQLC-HRNLVRLHDSYE  250 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---------~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~  250 (1310)
                      |.++|++.+.||+|+||+||+|+++.+|+.||||++.+...         ..++.+.+|+.+|++|+ |||||+++++|.
T Consensus         1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~   80 (277)
T d1phka_           1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   80 (277)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence            56899999999999999999999999999999999976432         12345789999999997 999999999999


Q ss_pred             eCCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         251 TKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       251 ~~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      +++.+|||||||+||+|.+.+...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+
T Consensus        81 ~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~--~~kl~DFG~a~  158 (277)
T d1phka_          81 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM--NIKLTDFGFSC  158 (277)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC--CEEECCCTTCE
T ss_pred             cCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCC--CeEEccchhee
Confidence            9999999999999999999998888999999999999999999999999999999999999998655  89999999999


Q ss_pred             eecCCCCCCCcccchHHHhh-------------------------------hcCCCccccCCCCC----CCCCCCcchhh
Q psy5279         331 RITSFGKLNPLEYDVRYVRQ-------------------------------ALRHPWLNFADRKP----TEDTPKLNTDA  375 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~~-------------------------------~~r~P~l~~~~~~~----~~~~p~~~~~~  375 (1310)
                      .+.........+||+.|+++                               .++.||-.-.....    ...........
T Consensus       159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~  238 (277)
T d1phka_         159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE  238 (277)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT
T ss_pred             EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcc
Confidence            98776555556667655443                               12233321110000    00000000111


Q ss_pred             hhhhcccchhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         376 LRNYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       376 ~~~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ..++...+.|.+...+..+...|+++++.+.|||..
T Consensus       239 ~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~  274 (277)
T d1phka_         239 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ  274 (277)
T ss_dssp             GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             cccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHH
Confidence            123344456777777888899999999999999973

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-37  Score=351.27  Aligned_cols=253  Identities=22%  Similarity=0.362  Sum_probs=189.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|++.+.||+|+||+||+|+++.||+.||||++++..   ....+.+.+|+.+|+.++|||||+++++|.+++.+|+||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            57999999999999999999999999999999997542   233566789999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC-CCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS-FGKL  338 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~-~~~l  338 (1310)
                      |||+||+|...+.+.+.++|..++.+++||+.||+|||++|||||||||+|||++.++  ++||+|||+|+.... ....
T Consensus        85 ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g--~vkl~DFG~a~~~~~~~~~~  162 (337)
T d1o6la_          85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKITDFGLCKEGISDGATM  162 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--CEEECCCTTCBCSCCTTCCB
T ss_pred             eccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCC--CEEEeecccccccccCCccc
Confidence            9999999999999888999999999999999999999999999999999999998765  899999999997654 3456


Q ss_pred             CCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchhh--chhhhhhhcccCCCCCCccCCCcceecCCC
Q psy5279         339 NPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKDW--YGNAAVRRYYRRRPLNSCYTHPSRMIYPPG  416 (1310)
Q Consensus       339 ~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D~--~~~~~l~~~~~r~~~~~cl~hpw~~~~~~~  416 (1310)
                      .+.|||+.|++     |++..+                 .-|+...||  .|+.+...+++++|.               
T Consensus       163 ~~~~GT~~Y~a-----PE~~~~-----------------~~y~~~~DiwSlGvilyeml~G~~pf---------------  205 (337)
T d1o6la_         163 KTFCGTPEYLA-----PEVLED-----------------NDYGRAVDWWGLGVVMYEMMCGRLPF---------------  205 (337)
T ss_dssp             CCCEECGGGCC-----GGGGSS-----------------SCBCTTHHHHHHHHHHHHHHHSSCSS---------------
T ss_pred             ccceeCHHHhh-----hhhccC-----------------CCCChhhcccchhhHHHHHHHCCCCC---------------
Confidence            67888887764     555322                 125556785  455555555555443               


Q ss_pred             CCCCCCCCCcceecccccccccccccccCCCCCCCcccc-cCCCCCCCCch--hhHHHHhccCCCH
Q psy5279         417 TQFTPEPTPDKVLVSRDLRDVKTWEDNVPNRGPDVKTWE-DNVPNRGPGGE--LLHSLTRQSYYTE  479 (1310)
Q Consensus       417 ~~~tp~~~p~~i~v~~~~rD~~~~~~~~~~~~~~~i~~~-d~v~e~~~~~e--l~~~~~~~~~~~e  479 (1310)
                      .+.++..+...+     ..........++..+.++|... ..+|+.+++..  ..+-++++..|.+
T Consensus       206 ~~~~~~~~~~~i-----~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~  266 (337)
T d1o6la_         206 YNQDHERLFELI-----LMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             CCSSHHHHHHHH-----HHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             CCcCHHHHHHHH-----hcCCCCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCccccc
Confidence            222211110110     0000011222333334555554 77888888642  3566777777654

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-37  Score=347.66  Aligned_cols=109  Identities=21%  Similarity=0.355  Sum_probs=88.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc---ccccCCCCCCcccccccccCC-
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT---LIHPINTPNPEFAAPEVLAEE- 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~---~~~~~~tGtp~Y~APEvl~~~- 1024 (1310)
                      ..+++||+.||+|||++|||||||||+|||++.  ++.+||+|||+++.......   .......||+.|+|||++.+. 
T Consensus       120 ~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~  197 (318)
T d3blha1         120 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITR--DGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGER  197 (318)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--TSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCS
T ss_pred             HHHHHHHHHHHHHhccCCEEecCcCchheeecC--CCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCC
Confidence            445679999999999999999999999999985  45799999999976543211   112224578999999999765 


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      .|+.++||||+||++|+|++|++||.+.+..+...
T Consensus       198 ~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~  232 (318)
T d3blha1         198 DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA  232 (318)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             CCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHH
Confidence            68899999999999999999999999877655543

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-37  Score=353.09  Aligned_cols=196  Identities=19%  Similarity=0.244  Sum_probs=131.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ++.++.||+.||+|||++||+||||||+|||++.  +..+|++|||+++.......  .....+|+.|+|||++.+..++
T Consensus       121 i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~--~~~~kl~df~~~~~~~~~~~--~~~~~~t~~y~aPE~l~~~~~~  196 (355)
T d2b1pa1         121 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYK  196 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT--TCCEEECCCCC-----------------CCTTCCHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHHHhhhcccccccCCcccccccc--ccceeeechhhhhccccccc--cccccccccccChhhhcCCCCC
Confidence            3456789999999999999999999999999986  45689999999876543322  2334577999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhccCCcchhcHHhhhCCCcccc
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFKHEVDWITLANNIDHEFWHV 1107 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~~~~~rit~~e~L~H~f~~~ 1107 (1310)
                      .++||||+||++|+|++|.+||.+.+.......+...                     +....                 
T Consensus       197 ~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~---------------------~~~~~-----------------  238 (355)
T d2b1pa1         197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ---------------------LGTPC-----------------  238 (355)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH---------------------HCCCC-----------------
T ss_pred             CCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHh---------------------ccCCC-----------------
Confidence            9999999999999999999999988765543332110                     00000                 


Q ss_pred             cccccccccccccccccccCCcccCCCcccccccccchhhcccCCCCccccchhhhhHHHHHhcCCCCCCCCChhhhhhc
Q psy5279        1108 KDLKRETNYTFRLSAKNVIGWSEKGIPSALFKTKEQAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQN 1187 (1310)
Q Consensus      1108 ~~l~~~~~~~~rlsa~~~i~~s~~~ips~lf~~~~qAPEVl~~~~y~~a~DIWSlGVI~Y~LLsG~~PF~g~~~~e~~~~ 1187 (1310)
                                                           |+           .+.+++.....+..+..++.+........+
T Consensus       239 -------------------------------------~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (355)
T d2b1pa1         239 -------------------------------------PE-----------FMKKLQPTVRNYVENRPKYAGLTFPKLFPD  270 (355)
T ss_dssp             -------------------------------------HH-----------HHTTSCHHHHHHHHTSCCCCCCCHHHHSCG
T ss_pred             -------------------------------------HH-----------HHHHhhhhHHHHhhcCcccccccccccccc
Confidence                                                 00           000112223344444445544444433322


Q ss_pred             ccccccccccchhccCHHHHHHHHHhhhcCCCCCCCHHHhhcCCccCC
Q psy5279        1188 VNFVRYRFEYLFKELTQEATRFLMLIFKRAPGKRPTVEECHENRWLVP 1235 (1310)
Q Consensus      1188 I~~~~~~f~~~~~~iS~eAkdfI~~lL~~dP~kRpTa~e~L~HpWl~~ 1235 (1310)
                      ......  ...+..+|++++|||++||..||++||||+|+|+||||..
T Consensus       271 ~~~~~~--~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~  316 (355)
T d2b1pa1         271 SLFPAD--SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  316 (355)
T ss_dssp             GGSCCS--SHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             cccccc--ccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence            211110  1234568999999999999999999999999999999963

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-37  Score=340.62  Aligned_cols=104  Identities=21%  Similarity=0.358  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC-CC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP-IF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~-ys 1027 (1310)
                      ..++.|+++||+|||++|||||||||+|||++.  ...+||+|||.++......... ....+++.|+|||++.+.. ++
T Consensus       104 ~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~--~~~~kl~DFG~a~~~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~  180 (292)
T d1unla_         104 KSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR--NGELKLANFGLARAFGIPVRCY-SAEVVTLWYRPPDVLFGAKLYS  180 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TCCEEECCCTTCEECCSCCSCC-CSCCSCGGGCCHHHHTTCSCCC
T ss_pred             HHHHHHHHHHHHHhhcCCEeeecccCccccccc--CCceeeeecchhhcccCCCccc-eeeccccchhhhhHhccCCCCC
Confidence            445679999999999999999999999999985  4569999999998765433322 2334568899999998765 68


Q ss_pred             CccchhHHHHHHHHHhcCCCCCC-CCChh
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFR-GQSEP 1055 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~-g~~~~ 1055 (1310)
                      .++||||+||++|+|++|..||. +.+..
T Consensus       181 ~~~DiwSlG~il~ell~g~~p~~~~~~~~  209 (292)
T d1unla_         181 TSIDMWSAGCIFAELANAGRPLFPGNDVD  209 (292)
T ss_dssp             THHHHHHHHHHHHHHTTTSCCSCCCSSHH
T ss_pred             chhhccccchHHHHHhhCCCCCCCCCCHH
Confidence            89999999999999999998864 44333

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.1e-36  Score=337.83  Aligned_cols=223  Identities=19%  Similarity=0.273  Sum_probs=175.4

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ---YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~---~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      ...|++.+.||+|+||+||+|+++.+|+.||||++......   ..+.+.+|+.+|++|+|||||+++++|.+++.+|||
T Consensus        14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   93 (309)
T d1u5ra_          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV   93 (309)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEE
Confidence            45699999999999999999999999999999999765432   335688999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      ||||.||+|...+...+.+++.+++.+++||+.||.|||++|||||||||+|||++.++  .+||+|||+|+....   .
T Consensus        94 ~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~--~~Kl~DFG~a~~~~~---~  168 (309)
T d1u5ra_          94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKLGDFGSASIMAP---A  168 (309)
T ss_dssp             EECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT--EEEECCCTTCBSSSS---B
T ss_pred             EEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCC--CEEEeecccccccCC---C
Confidence            99999999987777777899999999999999999999999999999999999998765  899999999987644   3


Q ss_pred             CCcccchHHHhhhcCC-----Cc------cccC--------CCCCCCCCCCcchhhhh-------------hhcccchhh
Q psy5279         339 NPLEYDVRYVRQALRH-----PW------LNFA--------DRKPTEDTPKLNTDALR-------------NYYNLYKDW  386 (1310)
Q Consensus       339 ~~~~~t~~yv~~~~r~-----P~------l~~~--------~~~~~~~~p~~~~~~~~-------------~~~~~~~D~  386 (1310)
                      ...+||+.|+++....     ++      +.+|        ...|...  ....+.+.             .+...++|+
T Consensus       169 ~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~--~~~~~~~~~i~~~~~~~~~~~~~s~~~~~l  246 (309)
T d1u5ra_         169 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN--MNAMSALYHIAQNESPALQSGHWSEYFRNF  246 (309)
T ss_dssp             CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTT--SCHHHHHHHHHHSCCCCCSCTTSCHHHHHH
T ss_pred             CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCC--CCHHHHHHHHHhCCCCCCCCCCCCHHHHHH
Confidence            4567888776653210     10      0000        1111110  00111111             122344677


Q ss_pred             chhhhhhhcccCCCCCCccCCCcce
Q psy5279         387 YGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       387 ~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      +...+..+...|+|+++++.|||+.
T Consensus       247 i~~~L~~dP~~Rpt~~ell~Hp~~~  271 (309)
T d1u5ra_         247 VDSCLQKIPQDRPTSEVLLKHRFVL  271 (309)
T ss_dssp             HHHHTCSSGGGSCCHHHHTTCHHHH
T ss_pred             HHHHCcCChhHCcCHHHHHhCHHhc
Confidence            7777778899999999999999974

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-36  Score=333.56  Aligned_cols=224  Identities=19%  Similarity=0.279  Sum_probs=168.8

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEe----CCeEEEE
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYET----KDSFTII  258 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~----~~~lyLV  258 (1310)
                      |++.++||+|+||+||+|.++.+++.||+|++....  ....+.+.+|+++|++|+|||||+++++|++    ...+|||
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            477889999999999999999999999999997543  2345678999999999999999999999975    4568999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCC--eeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLS--IAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~g--IVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      ||||+||+|.+.+.+...+++.+++.++.||+.||+|||++|  ||||||||+|||++.+. ..+||+|||+|+.... .
T Consensus        91 mE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~-~~~Kl~DFGla~~~~~-~  168 (270)
T d1t4ha_          91 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT-GSVKIGDLGLATLKRA-S  168 (270)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTT-SCEEECCTTGGGGCCT-T
T ss_pred             EeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCC-CCEEEeecCcceeccC-C
Confidence            999999999999988888999999999999999999999999  99999999999996432 4799999999986433 3


Q ss_pred             CCCCcccchHHHhhh------------------------cCCCccccCCCCCCC---CCCCcchhhhhhhcccchhhchh
Q psy5279         337 KLNPLEYDVRYVRQA------------------------LRHPWLNFADRKPTE---DTPKLNTDALRNYYNLYKDWYGN  389 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~------------------------~r~P~l~~~~~~~~~---~~p~~~~~~~~~~~~~~~D~~~~  389 (1310)
                      ...+.+||+.|+++.                        ++.||-.........   ..+.............++|.+..
T Consensus       169 ~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~  248 (270)
T d1t4ha_         169 FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG  248 (270)
T ss_dssp             SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHH
T ss_pred             ccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHH
Confidence            445667787766532                        222321110000000   00000000000112234566666


Q ss_pred             hhhhhcccCCCCCCccCCCcc
Q psy5279         390 AAVRRYYRRRPLNSCYTHPSR  410 (1310)
Q Consensus       390 ~~l~~~~~r~~~~~cl~hpw~  410 (1310)
                      .+..+..+|+|+++++.|||.
T Consensus       249 ~l~~dp~~R~s~~ell~Hp~f  269 (270)
T d1t4ha_         249 CIRQNKDERYSIKDLLNHAFF  269 (270)
T ss_dssp             HSCSSGGGSCCHHHHHTSGGG
T ss_pred             HccCCHhHCcCHHHHhCCccc
Confidence            667778999999999999995

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-36  Score=331.17  Aligned_cols=215  Identities=21%  Similarity=0.329  Sum_probs=160.0

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEe--CCeEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYET--KDSFTII  258 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~--~~~lyLV  258 (1310)
                      ++|++.+.||+|+||+||+|+++.||+.||||++.....  ...+.+.+|+++|++|+|||||+++++|.+  .+.+|||
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            679999999999999999999999999999999976532  345668899999999999999999999864  5679999


Q ss_pred             EecCCCCchHHHhhh----cCCCCHHHHHHHHHHHHHHHHHhhhCC-----eeecCCCCCCEEeecCCCCeEEEEeeccc
Q psy5279         259 SELAGGGELLHSLTR----QSYYTEYDIAHYIRQLLSGLDYMHRLS-----IAHLGLTPGDLLVAHPGGRHLLLTDFGLS  329 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~----~~~lsE~~i~~ii~QIl~GL~YLHs~g-----IVHRDLKPeNILL~~~~~~~VKLsDFGLA  329 (1310)
                      ||||+||+|.+.+.+    ...+++..++.++.||+.||+|||++|     ||||||||+||||+.++  .+||+|||+|
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~--~vkl~DFG~a  161 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ--NVKLGDFGLA  161 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTS--CEEECCHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCC--cEEEeeccce
Confidence            999999999998753    356999999999999999999999876     99999999999998765  7999999999


Q ss_pred             eeecCCC-CCCCcccchHHHhhh-------------------------cCCCccccCCCCCCCCCCCcchhhhh------
Q psy5279         330 RRITSFG-KLNPLEYDVRYVRQA-------------------------LRHPWLNFADRKPTEDTPKLNTDALR------  377 (1310)
Q Consensus       330 r~i~~~~-~l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~~~~p~~~~~~~~------  377 (1310)
                      +.+.... ..+..+||+.|+++.                         ++.||-...           ..+...      
T Consensus       162 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~-----------~~~~~~~i~~~~  230 (269)
T d2java1         162 RILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS-----------QKELAGKIREGK  230 (269)
T ss_dssp             HHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----------HHHHHHHHHHTC
T ss_pred             eecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCC-----------HHHHHHHHHcCC
Confidence            9876533 334566776665532                         223332111           001110      


Q ss_pred             ------hhcccchhhchhhhhhhcccCCCCCCccCCCcc
Q psy5279         378 ------NYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSR  410 (1310)
Q Consensus       378 ------~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~  410 (1310)
                            .+...+.|.+...+..+..+|+++++++.|||+
T Consensus       231 ~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         231 FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence                  122334666666777788999999999999995

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.9e-36  Score=340.45  Aligned_cols=164  Identities=23%  Similarity=0.390  Sum_probs=147.8

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      ++|++.+.||+|+||+||+|+++.+|+.||||++.+..   ....+.+.+|+.+|+.++|||||+++++|.+++.+|+||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            46999999999999999999999999999999997532   234567889999999999999999999999999999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN  339 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~  339 (1310)
                      |||.||+|...+.....+++..++.++.||+.||+|||++|||||||||+|||++.++  .+||+|||+|+.+..  ...
T Consensus        84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g--~vkL~DFG~a~~~~~--~~~  159 (316)
T d1fota_          84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG--HIKITDFGFAKYVPD--VTY  159 (316)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS--CEEECCCSSCEECSS--CBC
T ss_pred             eecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCC--CEEEecCccceEecc--ccc
Confidence            9999999999999888899999999999999999999999999999999999998765  899999999998754  344


Q ss_pred             CcccchHHHhh
Q psy5279         340 PLEYDVRYVRQ  350 (1310)
Q Consensus       340 ~~~~t~~yv~~  350 (1310)
                      +.+||+.|+++
T Consensus       160 ~~~Gt~~Y~AP  170 (316)
T d1fota_         160 TLCGTPDYIAP  170 (316)
T ss_dssp             CCCSCTTTCCH
T ss_pred             cccCcccccCH
Confidence            67888877664

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-38  Score=351.87  Aligned_cols=101  Identities=30%  Similarity=0.382  Sum_probs=78.5

Q ss_pred             HHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC--CCC
Q psy5279         950 YCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE--PIF 1027 (1310)
Q Consensus       950 ~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~--~ys 1027 (1310)
                      .++.||+.||+|||++|||||||||+|||++.  ++.+||+|||+++.+............|++.|+|||.+.+.  .++
T Consensus       133 ~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~--~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~  210 (322)
T d1vzoa_         133 IYVGEIVLALEHLHKLGIIYRDIKLENILLDS--NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHD  210 (322)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---C
T ss_pred             HHHHHHHHHHHHhhcCCEEeccCCccceeecC--CCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCC
Confidence            34679999999999999999999999999986  45799999999987643322223334567889999988654  356


Q ss_pred             CccchhHHHHHHHHHhcCCCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGASPFRGQ 1052 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~~PF~g~ 1052 (1310)
                      .++|||||||+||+|++|..||.+.
T Consensus       211 ~ksDIWSlG~iLyelltG~~PF~~~  235 (322)
T d1vzoa_         211 KAVDWWSLGVLMYELLTGASPFTVD  235 (322)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred             chhhhHHHHHHHHHHHhCCCCCCCC
Confidence            6788888888888888888888654

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-37  Score=345.25  Aligned_cols=108  Identities=21%  Similarity=0.445  Sum_probs=85.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCC-C
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEP-I 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~-y 1026 (1310)
                      +..++.||+.||+|||++||+||||||+|||++.  ++.+|++|||++......    .....|++.|+|||++.+.. +
T Consensus       123 ~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~--~~~~kl~dfg~a~~~~~~----~~~~~g~~~y~apE~~~~~~~~  196 (348)
T d2gfsa1         123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHY  196 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--TCCEEECCC----CCTGG----GSSSCHHHHTSCHHHHTTCSCC
T ss_pred             HHHHHHHHHHHHHHHHhCCCcccccCCccccccc--cccccccccchhcccCcc----cccccccccccCchhhcCCccC
Confidence            3556789999999999999999999999999985  467999999998654321    22345678999999987764 5


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNV 1061 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I 1061 (1310)
                      +.++|||||||++|+|++|.+||.+.+.......+
T Consensus       197 ~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i  231 (348)
T d2gfsa1         197 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI  231 (348)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            78999999999999999999999998766654443

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-37  Score=337.29  Aligned_cols=103  Identities=17%  Similarity=0.366  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||+|+..............|++.|||||++.+..|+.
T Consensus       112 ~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~--~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~  189 (272)
T d1qpca_         112 LDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI  189 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--TSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECH
T ss_pred             HHHHHHHHHHHHHHHhCCcccCccchhheeeec--ccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCc
Confidence            456789999999999999999999999999985  567999999999877544444444556789999999999889999


Q ss_pred             ccchhHHHHHHHHHhcC-CCCCCCCC
Q psy5279        1029 QTDVWSAGVLAYVLLSG-ASPFRGQS 1053 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLtG-~~PF~g~~ 1053 (1310)
                      ++|||||||++|||++| .+||...+
T Consensus       190 ~sDvwS~Gvvl~ellt~~~~~~~~~~  215 (272)
T d1qpca_         190 KSDVWSFGILLTEIVTHGRIPYPGMT  215 (272)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             hhhhhhhHHHHHHHHhCCCCCCCCCC
Confidence            99999999999999995 45554443

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-35  Score=333.87  Aligned_cols=227  Identities=22%  Similarity=0.355  Sum_probs=176.9

Q ss_pred             ccCCCeeeec-eecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhc-CCCCcceEEEEEEe----CC
Q psy5279         180 PITDAYDFGD-ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQL-CHRNLVRLHDSYET----KD  253 (1310)
Q Consensus       180 ~~~d~Y~i~~-~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~----~~  253 (1310)
                      .+.+.|++.. .||+|+||+||+|.++.||+.||||+++..     ..+.+|+.+|.++ +|||||+++++|++    ..
T Consensus         8 ~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~   82 (335)
T d2ozaa1           8 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRK   82 (335)
T ss_dssp             CGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred             CcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCC
Confidence            4567898875 599999999999999999999999999642     4577899997654 89999999999976    46


Q ss_pred             eEEEEEecCCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC-CCeEEEEeeccce
Q psy5279         254 SFTIISELAGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG-GRHLLLTDFGLSR  330 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~-~~~VKLsDFGLAr  330 (1310)
                      .+|||||||+||+|++.+...  ..++|.+++.+++||+.||+|||++||+||||||+|||++.++ ...+||+|||+|+
T Consensus        83 ~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~  162 (335)
T d2ozaa1          83 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  162 (335)
T ss_dssp             EEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             EEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceee
Confidence            799999999999999999764  3599999999999999999999999999999999999998643 3579999999999


Q ss_pred             eecCCCCCCCcccchHHHhh-------------------------hcCCCccccCCCCCCC--------CCCCcchhhhh
Q psy5279         331 RITSFGKLNPLEYDVRYVRQ-------------------------ALRHPWLNFADRKPTE--------DTPKLNTDALR  377 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~~-------------------------~~r~P~l~~~~~~~~~--------~~p~~~~~~~~  377 (1310)
                      ...........+||+.|+++                         .++.||-.........        ....+......
T Consensus       163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  242 (335)
T d2ozaa1         163 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS  242 (335)
T ss_dssp             ECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHH
T ss_pred             eccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccc
Confidence            88776666666777655442                         3445554322211100        00111112223


Q ss_pred             hhcccchhhchhhhhhhcccCCCCCCccCCCcce
Q psy5279         378 NYYNLYKDWYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       378 ~~~~~~~D~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      .+...++|++...+..+..+|+++.+++.|||..
T Consensus       243 ~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~  276 (335)
T d2ozaa1         243 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  276 (335)
T ss_dssp             HSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHH
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhh
Confidence            4455667887777888899999999999999963

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.5e-36  Score=341.22  Aligned_cols=165  Identities=25%  Similarity=0.407  Sum_probs=148.4

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      -++|++.+.||+|+||+||+|+++.||+.||||++.+..   ....+.+.+|+.+|+.++|||||+++++|.+.+.+|+|
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v  119 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence            378999999999999999999999999999999997532   23345688999999999999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      |||+.||+|...+.+.+.+++.+++.++.||+.||.|||++|||||||||+|||++.++  ++||+|||+|+.+...  .
T Consensus       120 ~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g--~ikL~DFG~a~~~~~~--~  195 (350)
T d1rdqe_         120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQVTDFGFAKRVKGR--T  195 (350)
T ss_dssp             EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEEECCCTTCEECSSC--B
T ss_pred             cccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCC--CEEeeeceeeeecccc--c
Confidence            99999999999998888999999999999999999999999999999999999998765  8999999999987543  4


Q ss_pred             CCcccchHHHhh
Q psy5279         339 NPLEYDVRYVRQ  350 (1310)
Q Consensus       339 ~~~~~t~~yv~~  350 (1310)
                      .+.+||+.|+++
T Consensus       196 ~~~~Gt~~Y~AP  207 (350)
T d1rdqe_         196 WTLCGTPEALAP  207 (350)
T ss_dssp             CCCEECGGGCCH
T ss_pred             ccccCccccCCH
Confidence            456788777654

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-37  Score=345.33  Aligned_cols=107  Identities=23%  Similarity=0.425  Sum_probs=90.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCC
Q psy5279         946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEE 1024 (1310)
Q Consensus       946 ~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~ 1024 (1310)
                      ..+..++.||+.||+|||++|||||||||+|||++.  ++.+||+|||+|+........ ......||+.|||||++.+.
T Consensus       164 ~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~--~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~  241 (325)
T d1rjba_         164 EDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH--GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEG  241 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEET--TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeeccCchhcccccc--CCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCC
Confidence            346678899999999999999999999999999985  567999999999866543322 22233468999999999999


Q ss_pred             CCCCccchhHHHHHHHHHhc-CCCCCCCCCh
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLS-GASPFRGQSE 1054 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLt-G~~PF~g~~~ 1054 (1310)
                      .|+.++|||||||++|||++ |.+||.+.+.
T Consensus       242 ~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~  272 (325)
T d1rjba_         242 IYTIKSDVWSYGILLWEIFSLGVNPYPGIPV  272 (325)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             CCCcceeccchhHHHHHHHhCCCCCCCCCCH
Confidence            99999999999999999997 9999987543

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-37  Score=348.58  Aligned_cols=109  Identities=26%  Similarity=0.430  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCC-CC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEE-PI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~-~y 1026 (1310)
                      +..+++||+.||+|||++|||||||||+|||++.+ ...+||+|||+++........  ....|++.|+|||++.+. .|
T Consensus       124 ~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~-~~~~kl~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~  200 (350)
T d1q5ka_         124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELIFGATDY  200 (350)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTT-TCCEEECCCTTCEECCTTSCC--CSCCSCTTSCCHHHHTTCSSC
T ss_pred             HHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecC-CCceeEecccchhhccCCccc--ccccccccccChHHhhcccCC
Confidence            56678899999999999999999999999999853 346999999999876543322  234578999999998754 68


Q ss_pred             CCccchhHHHHHHHHHhcCCCCCCCCChhHHHh
Q psy5279        1027 FPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQ 1059 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~ 1059 (1310)
                      +.++||||+||++|+|++|.+||.+.+..+...
T Consensus       201 ~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~  233 (350)
T d1q5ka_         201 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV  233 (350)
T ss_dssp             CTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHH
T ss_pred             CcceeecccceEEEehhhCCCCCCCCCHHHHHH
Confidence            999999999999999999999998877655433

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-35  Score=327.52  Aligned_cols=161  Identities=24%  Similarity=0.342  Sum_probs=136.1

Q ss_pred             eeceecccCceEEEEEEEcCCCcEEEEEEEecCCcc-----hHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         187 FGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQ-----YKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       187 i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~-----~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .++.||+|+||+||+|+++.+|+.||||+++.....     ....+.+|+.+|++++|||||+++++|.+++.+||||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            467899999999999999999999999998654221     234578999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CCCC
Q psy5279         262 AGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KLNP  340 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l~~  340 (1310)
                      |.||.+.........+++.+++.+++||+.||+|||++||+||||||+|||++.++  .+||+|||+|+...... ....
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~--~~KL~DFG~a~~~~~~~~~~~~  159 (299)
T d1ua2a_          82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG--VLKLADFGLAKSFGSPNRAYTH  159 (299)
T ss_dssp             CSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC--CEEECCCGGGSTTTSCCCCCCC
T ss_pred             hcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCC--ccccccCccccccCCCcccccc
Confidence            99998887777667799999999999999999999999999999999999998665  89999999998765432 3344


Q ss_pred             cccchHHHh
Q psy5279         341 LEYDVRYVR  349 (1310)
Q Consensus       341 ~~~t~~yv~  349 (1310)
                      .++|+.|++
T Consensus       160 ~~gt~~y~a  168 (299)
T d1ua2a_         160 QVVTRWYRA  168 (299)
T ss_dssp             SCCCCTTCC
T ss_pred             eecChhhcc
Confidence            566655544

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.8e-35  Score=335.95  Aligned_cols=226  Identities=21%  Similarity=0.309  Sum_probs=172.8

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHH---HHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFK---NELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~---rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ++|++.+.||+|+||+||+|+++.||+.||||++.+...   .....+.   +|+.+|+.++|||||+++++|.+++.+|
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            579999999999999999999999999999999975321   1222333   4477788889999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         257 IISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      ||||||+||+|.+.+.+...+++.+++.++.||+.||.|||++|||||||||+|||++.++  .+||+|||+|+.+... 
T Consensus        84 ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g--~iKl~DFGla~~~~~~-  160 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGLACDFSKK-  160 (364)
T ss_dssp             EEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSS--CEEECCCTTCEECSSS-
T ss_pred             EEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCC--cEEEeeeceeeecCCC-
Confidence            9999999999999998888899999999999999999999999999999999999998665  8999999999987553 


Q ss_pred             CCCCcccchHHHhhh--------------------------cCCCccccCCCCCCC---CCCCcchhhhhhhcccchhhc
Q psy5279         337 KLNPLEYDVRYVRQA--------------------------LRHPWLNFADRKPTE---DTPKLNTDALRNYYNLYKDWY  387 (1310)
Q Consensus       337 ~l~~~~~t~~yv~~~--------------------------~r~P~l~~~~~~~~~---~~p~~~~~~~~~~~~~~~D~~  387 (1310)
                      .....+||+.|+++.                          +..||..........   ............+...+.|++
T Consensus       161 ~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li  240 (364)
T d1omwa3         161 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL  240 (364)
T ss_dssp             CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHH
T ss_pred             cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHH
Confidence            445567888776643                          222332111000000   000000000012234457777


Q ss_pred             hhhhhhhcccCCC-----CCCccCCCcce
Q psy5279         388 GNAAVRRYYRRRP-----LNSCYTHPSRM  411 (1310)
Q Consensus       388 ~~~~l~~~~~r~~-----~~~cl~hpw~~  411 (1310)
                      ...+..+..+|++     +++++.|||..
T Consensus       241 ~~~L~~dP~~R~t~~~~~a~eil~Hp~f~  269 (364)
T d1omwa3         241 EGLLQRDVNRRLGCLGRGAQEVKESPFFR  269 (364)
T ss_dssp             HHHTCSSTTTSTTTSSSTHHHHHTSGGGT
T ss_pred             HHHcccCHHHhCCCcccCHHHHHcCcccc
Confidence            7788888999998     48999999964

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-35  Score=323.99  Aligned_cols=225  Identities=19%  Similarity=0.245  Sum_probs=175.3

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc------chHHHHHHHHHHHHhcC--CCCcceEEEEEEe
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN------QYKSLFKNELDIMNQLC--HRNLVRLHDSYET  251 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~------~~~~~~~rEI~IL~~L~--HPNIVkL~d~f~~  251 (1310)
                      |+.++|++.+.||+|+||+||+|+++.+|+.||||++.+...      .....+.+|+.+|++++  |||||+++++|.+
T Consensus         1 pl~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~   80 (273)
T d1xwsa_           1 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER   80 (273)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CCCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEee
Confidence            467899999999999999999999999999999999975321      11223568999999997  9999999999999


Q ss_pred             CCeEEEEEecCCC-CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         252 KDSFTIISELAGG-GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       252 ~~~lyLVmEy~~G-GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      ++.+|+||||+.+ +++.+.+.....+++.+++.++.||+.||+|||++||+||||||+|||++.++ ..+||+|||+|+
T Consensus        81 ~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~-~~vkl~DFG~a~  159 (273)
T d1xwsa_          81 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-GELKLIDFGSGA  159 (273)
T ss_dssp             SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT-TEEEECCCTTCE
T ss_pred             CCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCC-CeEEECccccce
Confidence            9999999999986 57888888778899999999999999999999999999999999999998543 489999999998


Q ss_pred             eecCCCCCCCcccchHHHhhhcC--CCcccc---------------CCCCCCCCCCCcchhhh--------hhhcccchh
Q psy5279         331 RITSFGKLNPLEYDVRYVRQALR--HPWLNF---------------ADRKPTEDTPKLNTDAL--------RNYYNLYKD  385 (1310)
Q Consensus       331 ~i~~~~~l~~~~~t~~yv~~~~r--~P~l~~---------------~~~~~~~~~p~~~~~~~--------~~~~~~~~D  385 (1310)
                      .... ...++.+||+.|+++...  .+....               ....| +    ...+.+        ..+...++|
T Consensus       160 ~~~~-~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~P-f----~~~~~i~~~~~~~~~~~s~~~~~  233 (273)
T d1xwsa_         160 LLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP-F----EHDEEIIRGQVFFRQRVSSECQH  233 (273)
T ss_dssp             ECCS-SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCS-C----CSHHHHHHCCCCCSSCCCHHHHH
T ss_pred             eccc-ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCC-C----CCchHHhhcccCCCCCCCHHHHH
Confidence            7644 345567788777654211  110000               01111 0    001111        123445577


Q ss_pred             hchhhhhhhcccCCCCCCccCCCcce
Q psy5279         386 WYGNAAVRRYYRRRPLNSCYTHPSRM  411 (1310)
Q Consensus       386 ~~~~~~l~~~~~r~~~~~cl~hpw~~  411 (1310)
                      ++...+..+...|+|+++++.|||..
T Consensus       234 li~~~L~~dp~~R~s~~eil~hp~~~  259 (273)
T d1xwsa_         234 LIRWCLALRPSDRPTFEEIQNHPWMQ  259 (273)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             HHHHHccCCHhHCcCHHHHhcCHhhC
Confidence            77777888899999999999999973

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-35  Score=322.63  Aligned_cols=163  Identities=25%  Similarity=0.348  Sum_probs=135.9

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      |+|++.+.||+|+||+||+|.++.+|+.||||++.....  ...+.+.+|+.+|++++|||||+++++|.+++.+|||||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            689999999999999999999999999999999965432  345678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC-CC
Q psy5279         261 LAGGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG-KL  338 (1310)
Q Consensus       261 y~~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~-~l  338 (1310)
                      ||.++.+...... ...+++.+++.++.||+.||+|||++|||||||||+|||++.++  .+||+|||+|+...... ..
T Consensus        82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~--~~kl~DFG~a~~~~~~~~~~  159 (298)
T d1gz8a_          82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTY  159 (298)
T ss_dssp             CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--CEEECSTTHHHHHCCCSBCT
T ss_pred             ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccC--cceeccCCcceeccCCcccc
Confidence            9987655443333 45699999999999999999999999999999999999998655  79999999998765432 23


Q ss_pred             CCcccchHH
Q psy5279         339 NPLEYDVRY  347 (1310)
Q Consensus       339 ~~~~~t~~y  347 (1310)
                      ...++|+.|
T Consensus       160 ~~~~gt~~y  168 (298)
T d1gz8a_         160 THEVVTLWY  168 (298)
T ss_dssp             TCCBCCCTT
T ss_pred             eeeccccee
Confidence            333444433

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.1e-36  Score=333.93  Aligned_cols=259  Identities=18%  Similarity=0.290  Sum_probs=201.0

Q ss_pred             CCcchhhhhhccccchhhhHHHHhhccccceeeeecccC----cchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCcccc
Q psy5279         595 TDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYS----HDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTTASN  670 (1310)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  670 (1310)
                      .++|+++..|-+|.||.|.+|..+. ++..||.|++..+    .+....+..|+..|++++|+||..+++.+......+.
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~-~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~   84 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLR-LHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   84 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT-TTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECC-CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCc
Confidence            4789999999999999999998765 7899999998643    3345578899999999999999999999988777777


Q ss_pred             hhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhcccccccccccc
Q psy5279         671 IAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDVKTW  750 (1310)
Q Consensus       671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  750 (1310)
                      ...||||+|.|.++..++..+...+|+.                                                    
T Consensus        85 ~~~lvmE~~~g~~L~~~~~~~~~l~~~~----------------------------------------------------  112 (277)
T d1o6ya_          85 LPYIVMEYVDGVTLRDIVHTEGPMTPKR----------------------------------------------------  112 (277)
T ss_dssp             EEEEEEECCCEEEHHHHHHHHCSCCHHH----------------------------------------------------
T ss_pred             eEEEEEECCCCCEehhhhcccCCCCHHH----------------------------------------------------
Confidence            7889999999998765554433333332                                                    


Q ss_pred             cCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCCcch
Q psy5279         751 EDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWKAPV  830 (1310)
Q Consensus       751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  830 (1310)
                                                                                                      
T Consensus       113 --------------------------------------------------------------------------------  112 (277)
T d1o6ya_         113 --------------------------------------------------------------------------------  112 (277)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeeeCCE
Q psy5279         831 IRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVIGDK  910 (1310)
Q Consensus       831 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~g~~  910 (1310)
                                                                                                      
T Consensus       113 --------------------------------------------------------------------------------  112 (277)
T d1o6ya_         113 --------------------------------------------------------------------------------  112 (277)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEE
Q psy5279         911 LEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLI  990 (1310)
Q Consensus       911 l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~  990 (1310)
                                                           +..++.||+.||+|||++|||||||||+|||++.  ...++++
T Consensus       113 -------------------------------------~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~--~~~~~l~  153 (277)
T d1o6ya_         113 -------------------------------------AIEVIADACQALNFSHQNGIIHRDVKPANIMISA--TNAVKVM  153 (277)
T ss_dssp             -------------------------------------HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TSCEEEC
T ss_pred             -------------------------------------HHHHHHHHHHHHHHHHhCCccCccccCcccccCc--cccceee
Confidence                                                 3345679999999999999999999999999986  4568999


Q ss_pred             eeccceeeccCCc--ccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccccc
Q psy5279         991 DLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRYRF 1068 (1310)
Q Consensus       991 DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~~f 1068 (1310)
                      |||++........  .......||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+..+....+......+
T Consensus       154 d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~  233 (277)
T d1o6ya_         154 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP  233 (277)
T ss_dssp             CCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC
T ss_pred             hhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCC
Confidence            9998865432211  12233467899999999999999999999999999999999999999998877766655444443


Q ss_pred             c-ccchhccHHHHHHHHHhccC-CcchhcHHhhhCCCcc
Q psy5279        1069 E-YLFKELTQEATRFLMLIFKH-EVDWITLANNIDHEFW 1105 (1310)
Q Consensus      1069 ~-~~~~~lS~eakdLL~~il~~-~~~rit~~e~L~H~f~ 1105 (1310)
                      + .....+|+++++||.+|+.. |.+|++.++.+.|+|.
T Consensus       234 ~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~  272 (277)
T d1o6ya_         234 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV  272 (277)
T ss_dssp             GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHH
Confidence            3 34567999999999998875 5667766666666653

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-35  Score=329.13  Aligned_cols=216  Identities=19%  Similarity=0.281  Sum_probs=173.8

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC---cchHHHHHHHHHHHH-hcCCCCcceEEEEEEeCCeEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG---NQYKSLFKNELDIMN-QLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~---~~~~~~~~rEI~IL~-~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      |+|++.+.||+|+||+||+|.++.||+.||||++++..   ....+.+.+|+.+|. .++|||||+++++|.+++.+|||
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            67999999999999999999999999999999997532   233445667777765 68999999999999999999999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC-CC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF-GK  337 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~-~~  337 (1310)
                      ||||+||+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.++  ++||+|||+|+..... ..
T Consensus        82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~--~~kl~DFG~a~~~~~~~~~  159 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG--HIKIADFGMCKENMLGDAK  159 (320)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--CEEECCCTTCBCCCCTTCC
T ss_pred             EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCC--ceeccccchhhhccccccc
Confidence            99999999999998888899999999999999999999999999999999999998655  8999999999976543 34


Q ss_pred             CCCcccchHHHhhh-------------------------cCCCccccCCCCCCCCCCCcchhhhh-----------hhcc
Q psy5279         338 LNPLEYDVRYVRQA-------------------------LRHPWLNFADRKPTEDTPKLNTDALR-----------NYYN  381 (1310)
Q Consensus       338 l~~~~~t~~yv~~~-------------------------~r~P~l~~~~~~~~~~~p~~~~~~~~-----------~~~~  381 (1310)
                      .+..+||+.|+++.                         +..||-+           ....+.+.           .+..
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~-----------~~~~~~~~~i~~~~~~~p~~~s~  228 (320)
T d1xjda_         160 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG-----------QDEEELFHSIRMDNPFYPRWLEK  228 (320)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCCTTSCH
T ss_pred             ccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCC-----------CCHHHHHHHHHcCCCCCCccCCH
Confidence            44567787776532                         2233321           11111111           1234


Q ss_pred             cchhhchhhhhhhcccCCCC-CCccCCCcce
Q psy5279         382 LYKDWYGNAAVRRYYRRRPL-NSCYTHPSRM  411 (1310)
Q Consensus       382 ~~~D~~~~~~l~~~~~r~~~-~~cl~hpw~~  411 (1310)
                      .+.|.+...+..+...|+++ +++++|||..
T Consensus       229 ~~~dli~~~L~~dP~~R~s~~~~l~~hpff~  259 (320)
T d1xjda_         229 EAKDLLVKLFVREPEKRLGVRGDIRQHPLFR  259 (320)
T ss_dssp             HHHHHHHHHSCSSGGGSBTTBSCGGGSGGGT
T ss_pred             HHHHHHHHhcccCCCCCcCHHHHHHhCchhc
Confidence            45677777777889999998 5899999974

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.7e-36  Score=330.73  Aligned_cols=256  Identities=17%  Similarity=0.250  Sum_probs=200.8

Q ss_pred             ccccCCCCCcchhhhhhccccchhhhHHHHhhccccceeeeecccCcchhhhhhHHhhhhhhhchhhHHHHHHhcCCCCc
Q psy5279         588 EWSTEPPTDKYQFISEIHRGKFSVVVKAAEKANTENLVAAKLFEYSHDTLHQVNTEFDNLRSLRHERIASLLEAYKPSTT  667 (1310)
Q Consensus       588 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  667 (1310)
                      +|.  -+.+.|++..+|-+|.||+|.+|..+. ++..||.|.+..+.....++..|...|++|+|+||..+++++...  
T Consensus        11 ~we--i~~~~~~~~~~iG~G~fg~Vy~a~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--   85 (287)
T d1opja_          11 KWE--MERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--   85 (287)
T ss_dssp             TTB--CCGGGEEEEEETTTTTTSSEEEEEEGG-GTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred             ccE--ecHHHeEEeeEEeeCCCeEEEEEEECC-CCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeC--
Confidence            473  445789999999999999999998765 788999999998888888999999999999999999999998755  


Q ss_pred             ccchhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccccc
Q psy5279         668 ASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLRDV  747 (1310)
Q Consensus       668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  747 (1310)
                        +...+|||||.|.+++.+|..+....                                                    
T Consensus        86 --~~~~iv~E~~~~g~l~~~l~~~~~~~----------------------------------------------------  111 (287)
T d1opja_          86 --PPFYIITEFMTYGNLLDYLRECNRQE----------------------------------------------------  111 (287)
T ss_dssp             --SSCEEEEECCTTCBHHHHHHHSCTTT----------------------------------------------------
T ss_pred             --CeeEEEeecccCcchHHHhhhccccc----------------------------------------------------
Confidence              45678999999998877764321000                                                    


Q ss_pred             ccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCCCC
Q psy5279         748 KTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLDWK  827 (1310)
Q Consensus       748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  827 (1310)
                                                                                                      
T Consensus       112 --------------------------------------------------------------------------------  111 (287)
T d1opja_         112 --------------------------------------------------------------------------------  111 (287)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeeeee
Q psy5279         828 APVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPVVI  907 (1310)
Q Consensus       828 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l~~  907 (1310)
                                                                                                      
T Consensus       112 --------------------------------------------------------------------------------  111 (287)
T d1opja_         112 --------------------------------------------------------------------------------  111 (287)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcE
Q psy5279         908 GDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQV  987 (1310)
Q Consensus       908 g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~V  987 (1310)
                                                         ........++.||+.||+|||++|||||||||+|||++.  ++.+
T Consensus       112 -----------------------------------~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~--~~~~  154 (287)
T d1opja_         112 -----------------------------------VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLV  154 (287)
T ss_dssp             -----------------------------------SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG--GGCE
T ss_pred             -----------------------------------hHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECC--CCcE
Confidence                                               001123456789999999999999999999999999986  4579


Q ss_pred             EEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcCCC-CCCCCChhHHHhhhccccc
Q psy5279         988 KLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSGAS-PFRGQSEPETRQNVNFVRY 1066 (1310)
Q Consensus       988 KL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG~~-PF~g~~~~e~~~~I~~~~~ 1066 (1310)
                      ||+|||+|+..............|++.|||||++.+..|+.++|||||||++|+|++|.. ||.+.+..++.+.+... +
T Consensus       155 Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~-~  233 (287)
T d1opja_         155 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-Y  233 (287)
T ss_dssp             EECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-C
T ss_pred             EEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcC-C
Confidence            999999998665433333333346789999999999999999999999999999999655 55566665555544332 2


Q ss_pred             cccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1067 RFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1067 ~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +. .....+++++++|+.+|+. +|.+|+++.++++
T Consensus       234 ~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         234 RM-ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             CC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CC-CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            22 2345789999999999887 5677999888753

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-36  Score=329.19  Aligned_cols=106  Identities=25%  Similarity=0.412  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||+|||++|||||||||+|||++.  ++.+||+|||+|+........  ......||+.|||||++.+..|
T Consensus       110 ~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~--~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~  187 (277)
T d1xbba_         110 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVT--QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF  187 (277)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE--TTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEE
T ss_pred             HHHHHHHHHHHhhHHhCCcccCCCcchhhcccc--cCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCC
Confidence            345679999999999999999999999999986  567999999999876433222  2233467899999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhH
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPE 1056 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e 1056 (1310)
                      +.++|||||||++|||++ |.+||.+.+..+
T Consensus       188 ~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~  218 (277)
T d1xbba_         188 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE  218 (277)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             CchhhhccchhhhhHHhhCCCCCCCCCCHHH
Confidence            999999999999999997 999998765443

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.2e-33  Score=316.11  Aligned_cols=161  Identities=24%  Similarity=0.406  Sum_probs=140.5

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC-CCCcceEEEEEEeC--CeEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLVRLHDSYETK--DSFTII  258 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~--~~lyLV  258 (1310)
                      .++|++.++||+|+||+||+|+++.+|+.||||+++..   ..+.+.+|+.+|++|+ ||||++++++|...  ..+|+|
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v  110 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  110 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEE
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEE
Confidence            47899999999999999999999999999999999743   2456889999999995 99999999999854  569999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCC
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKL  338 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l  338 (1310)
                      ||||.+|+|....   +.+++.+++.+++||+.||+|||++|||||||||+|||++.++ ..+||+|||+|+........
T Consensus       111 ~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~-~~vkl~DFG~a~~~~~~~~~  186 (328)
T d3bqca1         111 FEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH-RKLRLIDWGLAEFYHPGQEY  186 (328)
T ss_dssp             EECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT-TEEEECCGGGCEECCTTCCC
T ss_pred             EeecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCC-CeeeecccccceeccCCCcc
Confidence            9999999997653   4599999999999999999999999999999999999998654 47999999999988766666


Q ss_pred             CCcccchHHHh
Q psy5279         339 NPLEYDVRYVR  349 (1310)
Q Consensus       339 ~~~~~t~~yv~  349 (1310)
                      ...++|+.|.+
T Consensus       187 ~~~~~t~~y~a  197 (328)
T d3bqca1         187 NVRVASRYFKG  197 (328)
T ss_dssp             CSCCSCGGGCC
T ss_pred             cccccCccccC
Confidence            66666665543

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.6e-34  Score=313.11  Aligned_cols=149  Identities=27%  Similarity=0.413  Sum_probs=135.8

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|++.++||+|+||+||+|.++ +|+.||||++.....  ...+.+.+|+.+|++++|||||+++++|..++.+|++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e   80 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEE
Confidence            68999999999999999999985 789999999975432  335678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      |+.++.+.......+.+++..++.++.||+.||+|||++|||||||||+|||++.++  .+||+|||+|.....
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~--~~kl~DfG~a~~~~~  152 (286)
T d1ob3a_          81 HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG--ELKIADFGLARAFGI  152 (286)
T ss_dssp             CCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--CEEECCTTHHHHHCC
T ss_pred             eehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCC--CEEecccccceeccc
Confidence            999988888877778899999999999999999999999999999999999998765  899999999987654

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-33  Score=305.53  Aligned_cols=151  Identities=26%  Similarity=0.387  Sum_probs=139.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISE  260 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmE  260 (1310)
                      ++|++.++||+|+||+||+|+++.+|+.||||+++....  .....+.+|+.+|+.++|||||+++++|.+.+.+++|||
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            689999999999999999999999999999999975432  345678899999999999999999999999999999999


Q ss_pred             cCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         261 LAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ++.|++|...+...+.+++..++.++.|++.||+|||++|||||||||+|||++.++  .+||+|||+|+.....
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~--~~kl~DFG~a~~~~~~  154 (292)
T d1unla_          82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG--ELKLANFGLARAFGIP  154 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEECCCTTCEECCSC
T ss_pred             eccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCC--ceeeeecchhhcccCC
Confidence            999999988888888899999999999999999999999999999999999998655  7999999999987654

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.8e-34  Score=316.40  Aligned_cols=199  Identities=21%  Similarity=0.301  Sum_probs=157.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhcCCCCcceEEEEEEeCC---
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN---QYKSLFKNELDIMNQLCHRNLVRLHDSYETKD---  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~---~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~---  253 (1310)
                      .+.++|++.+.||+|+||+||+|.++.+|+.||||++++...   .....+.+|+.+|+.++|||||++++++...+   
T Consensus         4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~   83 (277)
T d1o6ya_           4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG   83 (277)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSS
T ss_pred             CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCC
Confidence            577899999999999999999999999999999999976432   33456889999999999999999999998765   


Q ss_pred             -eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         254 -SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       254 -~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                       .+|||||||+||+|.+.+...+.+++.+++.++.||+.||+|||++|||||||||+|||++.++  .+||+|||+++..
T Consensus        84 ~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~--~~~l~d~~~~~~~  161 (277)
T d1o6ya_          84 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN--AVKVMDFGIARAI  161 (277)
T ss_dssp             EEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTS--CEEECCCTTCEEC
T ss_pred             ceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccc--cceeehhhhhhhh
Confidence             3899999999999999998888899999999999999999999999999999999999998765  7999999999876


Q ss_pred             cCCC----CCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCC
Q psy5279         333 TSFG----KLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       333 ~~~~----~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~  402 (1310)
                      ....    ...+.+||+.|+     +|++..+.                 .++...| | .|..+...++.++|..
T Consensus       162 ~~~~~~~~~~~~~~Gt~~Y~-----aPE~~~~~-----------------~~~~~~DiwSlGvilyelltG~~Pf~  215 (277)
T d1o6ya_         162 ADSGNSVTQTAAVIGTAQYL-----SPEQARGD-----------------SVDARSDVYSLGCVLYEVLTGEPPFT  215 (277)
T ss_dssp             C----------------TTC-----CHHHHTTC-----------------CCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ccccccccccccccCccccc-----CHHHHcCC-----------------CCCcceecccchHHHHHHHhCCCCCC
Confidence            4332    233445665554     45543211                 1344466 5 6777777777776654

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-35  Score=321.44  Aligned_cols=152  Identities=17%  Similarity=0.293  Sum_probs=114.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCC-cccccCCCCCCcccccccccCC---
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLG-TLIHPINTPNPEFAAPEVLAEE--- 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g-~~~~~~~tGtp~Y~APEvl~~~--- 1024 (1310)
                      ..++.||+.||+|||++|||||||||+|||++.  +..+||+|||+|+...... ........||+.|||||++.+.   
T Consensus       107 ~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~--~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~  184 (276)
T d1uwha_         107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE--DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN  184 (276)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET--TSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSC
T ss_pred             HHHHHHHHHHHHHHhcCCEeccccCHHHEEEcC--CCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCC
Confidence            345679999999999999999999999999985  5679999999997654322 1222344678999999999643   


Q ss_pred             CCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhccccc---cccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVNFVRY---RFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~~~~~---~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      .|+.++|||||||++|||++|..||.+.+.......+....+   ..+.....+++++++|+.+++. ++.+|+++.+++
T Consensus       185 ~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il  264 (276)
T d1uwha_         185 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL  264 (276)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence            588899999999999999999999998766544333322222   2233456789999999999986 567899998877


Q ss_pred             CC
Q psy5279        1101 DH 1102 (1310)
Q Consensus      1101 ~H 1102 (1310)
                      .+
T Consensus       265 ~~  266 (276)
T d1uwha_         265 AS  266 (276)
T ss_dssp             HH
T ss_pred             HH
Confidence            55

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-35  Score=320.25  Aligned_cols=150  Identities=20%  Similarity=0.278  Sum_probs=112.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||+++..............||+.|||||++.+..|+.
T Consensus       104 ~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~--~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~  181 (263)
T d1sm2a_         104 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE--NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS  181 (263)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECG--GGCEEECSCC------------------CTTSCCHHHHTTCCCCH
T ss_pred             HHHHHHHHHHHHhhhccceeecccchhheeecC--CCCeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCc
Confidence            446789999999999999999999999999986  456999999999876543333333446789999999999999999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++|||||||++|||++ |.+||.+.+..+....+.....  +......++++.+|+.+++. +|.+|+++.++++|
T Consensus       182 k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         182 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR--LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCC--CCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            9999999999999998 6788888888777776654321  12235678999999999886 56789999988765

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-35  Score=325.57  Aligned_cols=105  Identities=26%  Similarity=0.372  Sum_probs=82.1

Q ss_pred             hHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCC
Q psy5279         947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       947 ~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      .+..++.||+.||+|||++|||||||||+|||++.  ++.+||+|||+|+........ ......||+.|||||++.+..
T Consensus       135 ~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~--~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  212 (299)
T d1ywna1         135 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE--KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV  212 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECG--GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECC--CCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCC
Confidence            35667899999999999999999999999999986  457999999999865433222 233456789999999999999


Q ss_pred             CCCccchhHHHHHHHHHhcC-CCCCCCCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSG-ASPFRGQS 1053 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG-~~PF~g~~ 1053 (1310)
                      |+.++|||||||++|||++| .+||.+.+
T Consensus       213 ~~~~sDiwS~Gvil~ellt~~~~p~~~~~  241 (299)
T d1ywna1         213 YTIQSDVWSFGVLLWEIFSLGASPYPGVK  241 (299)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             CCcccceeehHHHHHHHHhCCCCCCCCCC
Confidence            99999999999999999986 56786543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-35  Score=323.56  Aligned_cols=104  Identities=18%  Similarity=0.305  Sum_probs=79.0

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ...++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++..............||+.|+|||++....++
T Consensus       115 ~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  192 (285)
T d1fmka3         115 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT  192 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG--GGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHhhhheecccccceEEEECC--CCcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCC
Confidence            3456789999999999999999999999999986  45799999999976543333333334678999999999999999


Q ss_pred             CccchhHHHHHHHHHhcCC-CCCCCCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSGA-SPFRGQS 1053 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG~-~PF~g~~ 1053 (1310)
                      .++|||||||++|||++|. +||.+.+
T Consensus       193 ~ksDI~S~Giil~el~t~~~p~~~~~~  219 (285)
T d1fmka3         193 IKSDVWSFGILLTELTTKGRVPYPGMV  219 (285)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             cHHhhhcchHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999955 4444443

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-33  Score=316.46  Aligned_cols=162  Identities=24%  Similarity=0.305  Sum_probs=134.7

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeC------CeEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETK------DSFT  256 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~------~~ly  256 (1310)
                      -.|...++||+|+||+||+|+++.+|+.||||++......    ..+|+.+|++|+|||||+++++|...      ..+|
T Consensus        20 ~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~   95 (350)
T d1q5ka_          20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN   95 (350)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEE
T ss_pred             CCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEE
Confidence            3689999999999999999999999999999999754322    34799999999999999999999643      3589


Q ss_pred             EEEecCCCCchH---HHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         257 IISELAGGGELL---HSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       257 LVmEy~~GGeL~---~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      ||||||++|.+.   ........+++.+++.+++||+.||+|||++||+||||||+|||++.++ ..+||+|||+|+.+.
T Consensus        96 lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~-~~~kl~DFG~a~~~~  174 (350)
T d1q5ka_          96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT-AVLKLCDFGSAKQLV  174 (350)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTT-CCEEECCCTTCEECC
T ss_pred             EEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCC-CceeEecccchhhcc
Confidence            999999987432   2233455699999999999999999999999999999999999998654 479999999999887


Q ss_pred             CCCCCCCcccchHHHh
Q psy5279         334 SFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       334 ~~~~l~~~~~t~~yv~  349 (1310)
                      ......+.++|+.|.+
T Consensus       175 ~~~~~~~~~gt~~y~a  190 (350)
T d1q5ka_         175 RGEPNVSYICSRYYRA  190 (350)
T ss_dssp             TTSCCCSCCSCTTSCC
T ss_pred             CCcccccccccccccC
Confidence            6655555666655443

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-33  Score=314.62  Aligned_cols=167  Identities=22%  Similarity=0.318  Sum_probs=136.2

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC----e
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD----S  254 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~----~  254 (1310)
                      .+.++|++++.||+|+||+||+|+++.+|+.||||++++.. ....+.+.+|+.+|++|+|||||++++++....    .
T Consensus         5 ~i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~   84 (345)
T d1pmea_           5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK   84 (345)
T ss_dssp             CCCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             CcCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccc
Confidence            45688999999999999999999999999999999997543 234556889999999999999999999997654    2


Q ss_pred             EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         255 FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      .++++|++.||+|++.+.. ..+++.+++.++.||+.||+|||++|||||||||+|||++.++  .+||+|||+|+....
T Consensus        85 ~~~l~~~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~--~~kl~DfG~a~~~~~  161 (345)
T d1pmea_          85 DVYLVTHLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADP  161 (345)
T ss_dssp             CEEEEEECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC--CEEECCCTTCEECCG
T ss_pred             eEEEEEeecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCC--CEEEcccCceeeccC
Confidence            3444456678999999865 4699999999999999999999999999999999999998655  899999999987644


Q ss_pred             CC----CCCCcccchHHHh
Q psy5279         335 FG----KLNPLEYDVRYVR  349 (1310)
Q Consensus       335 ~~----~l~~~~~t~~yv~  349 (1310)
                      ..    .....++|+.|.+
T Consensus       162 ~~~~~~~~~~~~gt~~y~a  180 (345)
T d1pmea_         162 DHDHTGFLTEYVATRWYRA  180 (345)
T ss_dssp             GGCBCCTTCCCCSCGGGCC
T ss_pred             CCccceeeccccccceech
Confidence            22    2344556665544

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=3.1e-33  Score=315.38  Aligned_cols=164  Identities=26%  Similarity=0.417  Sum_probs=133.4

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeCC----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETKD----  253 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~----  253 (1310)
                      .+.++|++.+.||+|+||+||+|.++.+|+.||||++++...  ...+.+.+|+.+|+.|+|||||+++++|...+    
T Consensus        15 ~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~   94 (346)
T d1cm8a_          15 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD   94 (346)
T ss_dssp             CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred             ecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccc
Confidence            478999999999999999999999999999999999975432  33556889999999999999999999998765    


Q ss_pred             --eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         254 --SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       254 --~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                        .+||||||| |++|.... +...+++..++.+++||+.||+|||++|||||||||+|||++.++  .+||+|||+|+.
T Consensus        95 ~~~~~lv~e~~-~~~l~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~--~~kl~Dfg~a~~  170 (346)
T d1cm8a_          95 FTDFYLVMPFM-GTDLGKLM-KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC--ELKILDFGLARQ  170 (346)
T ss_dssp             CCCCEEEEECC-SEEHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC--CEEECCCTTCEE
T ss_pred             cceEEEEEecc-cccHHHHH-HhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhccccc--ccccccccceec
Confidence              579999999 44555544 556799999999999999999999999999999999999998765  899999999998


Q ss_pred             ecCCCCCCCcccchHHHh
Q psy5279         332 ITSFGKLNPLEYDVRYVR  349 (1310)
Q Consensus       332 i~~~~~l~~~~~t~~yv~  349 (1310)
                      ...  ..+..++|+.|++
T Consensus       171 ~~~--~~~~~~~t~~y~a  186 (346)
T d1cm8a_         171 ADS--EMTGYVVTRWYRA  186 (346)
T ss_dssp             CCS--SCCSSCSCGGGCC
T ss_pred             cCC--ccccccccccccC
Confidence            754  3344555655443

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=3.1e-34  Score=313.40  Aligned_cols=150  Identities=18%  Similarity=0.275  Sum_probs=125.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||++||.|||++||+||||||+|||++.  +..+||+|||+++..............||+.|+|||++.+..|+.
T Consensus       103 ~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  180 (258)
T d1k2pa_         103 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVND--QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS  180 (258)
T ss_dssp             HHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECT--TCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHHHhhcCcccccccceeEEEcC--CCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCc
Confidence            446789999999999999999999999999985  567999999999766544333333345788999999999999999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++|||||||++|||++ |+.||.+.+..++..++.... +. ......++++++|+.+++. +|.+|+++.+++.|
T Consensus       181 ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~-~~-~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         181 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-RL-YRPHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC-CC-CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCC-CC-CCcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            9999999999999998 899999999988888776543 22 2345788999999999987 56789999988765

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.9e-34  Score=315.83  Aligned_cols=150  Identities=17%  Similarity=0.221  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||++||.|||++|||||||||+|||++.  ...+||+|||+|+..............||+.|+|||++.+..|+.
T Consensus       111 ~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~--~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~  188 (273)
T d1mp8a_         111 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSS--NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS  188 (273)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE--TTEEEECC-------------------CCGGGCCHHHHHHCCCSH
T ss_pred             HHHHHHHHHHhhhhcccCeeccccchhheeecC--CCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCC
Confidence            445679999999999999999999999999986  457999999999876543333444556789999999999999999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++|||||||++|||++ |.+||.+.+..++...+.....  +..++.+++++++||.+|+. +|.+|+++.+++.|
T Consensus       189 ~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         189 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER--LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            9999999999999998 9999999998888777655432  23456789999999999987 56789999887654

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=3.4e-33  Score=308.75  Aligned_cols=168  Identities=26%  Similarity=0.355  Sum_probs=137.9

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCC-CcEEEEEEEecCC--cchHHHHHHHHHHHHhc---CCCCcceEEEEEEe---
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSS-GRNYAAKVMTGKG--NQYKSLFKNELDIMNQL---CHRNLVRLHDSYET---  251 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~T-g~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L---~HPNIVkL~d~f~~---  251 (1310)
                      ..++|++.++||+|+||+||+|+++.+ ++.||||++....  ......+.+|+.+|+.|   +|||||+++++|..   
T Consensus         5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~   84 (305)
T d1blxa_           5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   84 (305)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence            457899999999999999999999766 6679999986432  22233466788887776   79999999999863   


Q ss_pred             --CCeEEEEEecCCCCchHHHhh-hcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecc
Q psy5279         252 --KDSFTIISELAGGGELLHSLT-RQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGL  328 (1310)
Q Consensus       252 --~~~lyLVmEy~~GGeL~~~l~-~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGL  328 (1310)
                        ...+|++||||.+|.+..... ....+++..++.+++||+.||+|||++|||||||||+|||++.++  .+||+|||+
T Consensus        85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~--~~kl~dfg~  162 (305)
T d1blxa_          85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG--QIKLADFGL  162 (305)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC--CEEECSCCS
T ss_pred             ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCC--Ceeecchhh
Confidence              357899999999987754443 345699999999999999999999999999999999999998765  799999999


Q ss_pred             ceeecCCCCCCCcccchHHHhh
Q psy5279         329 SRRITSFGKLNPLEYDVRYVRQ  350 (1310)
Q Consensus       329 Ar~i~~~~~l~~~~~t~~yv~~  350 (1310)
                      ++...........+||+.|+++
T Consensus       163 ~~~~~~~~~~~~~~gT~~Y~AP  184 (305)
T d1blxa_         163 ARIYSFQMALTSVVVTLWYRAP  184 (305)
T ss_dssp             CCCCCGGGGGCCCCCCCTTCCH
T ss_pred             hhhhcccccCCCcccChhhcCc
Confidence            9987665566667777766553

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.98  E-value=8.2e-33  Score=308.00  Aligned_cols=153  Identities=23%  Similarity=0.343  Sum_probs=126.8

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCc---EEEEEEEecC-CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGR---NYAAKVMTGK-GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~---~vAIKiI~~~-~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .+.|++.+.||+|+||+||+|.++.+|+   .||||.+... .....+.+.+|+.+|++|+|||||+++++|.+++.+||
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~i  104 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMI  104 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            3679999999999999999999988775   5888887654 33455678999999999999999999999999999999


Q ss_pred             EEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCC
Q psy5279         258 ISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFG  336 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~  336 (1310)
                      |||||+||+|.+.+... +.+++.++..++.||+.||.|||++|||||||||+||||+.++  .+||+|||+|+.+....
T Consensus       105 v~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~--~~Kl~DFGla~~~~~~~  182 (299)
T d1jpaa_         105 ITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL--VCKVSDFGLSRFLEDDT  182 (299)
T ss_dssp             EEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC--CEEECCC----------
T ss_pred             EEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCC--cEEECCcccceEccCCC
Confidence            99999999999988764 4599999999999999999999999999999999999998655  89999999999876543

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.98  E-value=6.3e-33  Score=307.24  Aligned_cols=151  Identities=26%  Similarity=0.338  Sum_probs=137.4

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .++|++.+.||+|+||+||+|.++.+|+.||||+++... ...+.+.+|+.+|++|+|||||+++++|.+++.+||||||
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   94 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   94 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence            467999999999999999999999999999999987543 3456789999999999999999999999999999999999


Q ss_pred             CCCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         262 AGGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       262 ~~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |++|+|.+.+...  ..+++..+..++.||+.||+|||++|||||||||+||||+.++  .+||+|||+|+.....
T Consensus        95 ~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~--~~Kl~DFG~a~~~~~~  168 (287)
T d1opja_          95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--LVKVADFGLSRLMTGD  168 (287)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--CEEECCCCCTTTCCSS
T ss_pred             ccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCC--cEEEccccceeecCCC
Confidence            9999999998654  4589999999999999999999999999999999999998765  8999999999976543

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=9.6e-33  Score=307.23  Aligned_cols=166  Identities=25%  Similarity=0.356  Sum_probs=137.5

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEe--------
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYET--------  251 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~--------  251 (1310)
                      -++|++.++||+|+||+||+|+++.+|+.||||++....  ......+.+|+.+|++|+||||+++++++..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            478999999999999999999999999999999986542  2345668899999999999999999999865        


Q ss_pred             CCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         252 KDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       252 ~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                      ++.+|+|||||.++.+.........+++..++.+++||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~--~~kl~dfg~~~~  166 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARA  166 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS--CEEECCCTTCEE
T ss_pred             CceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCC--cEEeeecceeee
Confidence            456899999999888776666666799999999999999999999999999999999999998765  799999999987


Q ss_pred             ecCCC-----CCCCcccchHHHh
Q psy5279         332 ITSFG-----KLNPLEYDVRYVR  349 (1310)
Q Consensus       332 i~~~~-----~l~~~~~t~~yv~  349 (1310)
                      +....     .....++|+.|++
T Consensus       167 ~~~~~~~~~~~~~~~~gT~~Y~a  189 (318)
T d3blha1         167 FSLAKNSQPNRYTNRVVTLWYRP  189 (318)
T ss_dssp             CCC-----CCCCCSCCSCGGGCC
T ss_pred             cccccccccccccceecCHHHhh
Confidence            65322     2233456665544

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=5.6e-34  Score=317.46  Aligned_cols=149  Identities=14%  Similarity=0.259  Sum_probs=111.9

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCccc----ccCCCCCCcccccccccCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLI----HPINTPNPEFAAPEVLAEE 1024 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~----~~~~tGtp~Y~APEvl~~~ 1024 (1310)
                      ..++.||+.||.|||++|||||||||+|||++.  ++.+||+|||+|+.........    .....||+.|||||++.+.
T Consensus       131 ~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~--~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  208 (299)
T d1jpaa_         131 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNS--NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR  208 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT--TCCEEECCC-----------------------CGGGSCHHHHHSC
T ss_pred             HHHHHHHHHHHHHHhhCCCccCccccceEEECC--CCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcC
Confidence            456789999999999999999999999999985  5679999999998654322211    1123467899999999999


Q ss_pred             CCCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      .|+.++|||||||++|||++ |..||.+.+..+....+.... +.+ ....+++++.+|+.+|+. +|.+|+++.++++
T Consensus       209 ~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~-~~~-~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~  285 (299)
T d1jpaa_         209 KFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDY-RLP-PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVN  285 (299)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-CCC-CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCC-CCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            99999999999999999998 899999998888777665432 222 235688999999999886 6778999888764

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.1e-33  Score=304.97  Aligned_cols=197  Identities=21%  Similarity=0.363  Sum_probs=152.4

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecC--CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGK--GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~--~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVm  259 (1310)
                      .++|++.+.||+|+||+||+|..+   ..||||+++..  .....+.+.+|+.+|++++|||||++++++. .+.+||||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~   82 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVT   82 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEE
Confidence            467899999999999999999743   46999999654  2345667899999999999999999999875 45689999


Q ss_pred             ecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC---
Q psy5279         260 ELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF---  335 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~---  335 (1310)
                      |||+||+|.+.+... ..+++..+..++.||+.||+|||++|||||||||+|||++.++  .+||+|||+|+.....   
T Consensus        83 Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~--~~Kl~DFGla~~~~~~~~~  160 (276)
T d1uwha_          83 QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL--TVKIGDFGLATVKSRWSGS  160 (276)
T ss_dssp             ECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTS--SEEECCCCCSCC-------
T ss_pred             ecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCC--CEEEccccceeeccccCCc
Confidence            999999999998654 4599999999999999999999999999999999999998765  8999999999876532   


Q ss_pred             CCCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCCC
Q psy5279         336 GKLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLNS  403 (1310)
Q Consensus       336 ~~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~~  403 (1310)
                      ...+..+||+.|++     |++..+...              +.|+...| | +|..+...++.+.|..+
T Consensus       161 ~~~~~~~gt~~y~A-----PE~l~~~~~--------------~~~~~~sDiwS~Gv~l~el~tg~~Pf~~  211 (276)
T d1uwha_         161 HQFEQLSGSILWMA-----PEVIRMQDK--------------NPYSFQSDVYAFGIVLYELMTGQLPYSN  211 (276)
T ss_dssp             -----CCCCGGGCC-----HHHHTTCSS--------------CCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccccccccCcccCC-----HHHHhcccC--------------CCCCchhhhhhhHHHHHHHHHCCCCCCC
Confidence            23445677777764     554321110              11333456 4 77778887877777654

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.4e-32  Score=305.85  Aligned_cols=197  Identities=26%  Similarity=0.427  Sum_probs=154.7

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCc-----EEEEEEEecC-CcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGR-----NYAAKVMTGK-GNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~-----~vAIKiI~~~-~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~l  255 (1310)
                      ++|++.+.||+|+||+||+|+++.+++     .||+|++... .......+.+|+.+|+++ +|||||+++++|.+.+.+
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~  116 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI  116 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence            679999999999999999999887654     6999998654 234556788999999998 899999999999999999


Q ss_pred             EEEEecCCCCchHHHhhhc-----------------------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEE
Q psy5279         256 TIISELAGGGELLHSLTRQ-----------------------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLL  312 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~-----------------------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNIL  312 (1310)
                      |||||||+||+|.+.+...                       ..+++.++..++.||+.||+|||++|||||||||+|||
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nil  196 (325)
T d1rjba_         117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL  196 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEE
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccc
Confidence            9999999999999998653                       24889999999999999999999999999999999999


Q ss_pred             eecCCCCeEEEEeeccceeecCCCCC---CCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-c
Q psy5279         313 VAHPGGRHLLLTDFGLSRRITSFGKL---NPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-Y  387 (1310)
Q Consensus       313 L~~~~~~~VKLsDFGLAr~i~~~~~l---~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~  387 (1310)
                      ++.++  .+||+|||+|+........   .+.++|+.|++     |++..                 ...|+...| | +
T Consensus       197 l~~~~--~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~a-----PE~l~-----------------~~~~~~~~DiwS~  252 (325)
T d1rjba_         197 VTHGK--VVKICDFGLARDIMSDSNYVVRGNARLPVKWMA-----PESLF-----------------EGIYTIKSDVWSY  252 (325)
T ss_dssp             EETTT--EEEECCCGGGSCGGGCTTSEEETTEEECGGGCC-----HHHHH-----------------HCCCCHHHHHHHH
T ss_pred             cccCC--eEEEeeccccccccCCCceeeeccccCCCccCC-----hHHHc-----------------CCCCCcceeccch
Confidence            98765  8999999999987654422   23455665554     44321                 122445567 4 6


Q ss_pred             hhhhhhhcc-cCCCCCC
Q psy5279         388 GNAAVRRYY-RRRPLNS  403 (1310)
Q Consensus       388 ~~~~l~~~~-~r~~~~~  403 (1310)
                      |+.+...++ +++|..+
T Consensus       253 Gvil~emlt~g~~Pf~~  269 (325)
T d1rjba_         253 GILLWEIFSLGVNPYPG  269 (325)
T ss_dssp             HHHHHHHTTTSCCSSTT
T ss_pred             hHHHHHHHhCCCCCCCC
Confidence            666666665 5665543

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.9e-34  Score=313.87  Aligned_cols=147  Identities=20%  Similarity=0.253  Sum_probs=120.8

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||+|||++|||||||||+|||++.  +..+||+|||+|+.+......  ......||+.|||||++.+..|
T Consensus       112 ~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~--~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  189 (285)
T d1u59a_         112 AELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN--RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF  189 (285)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEE--TTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHHHhCCeecCcCchhheeecc--CCceeeccchhhhcccccccccccccccccCccccChHHHhCCCC
Confidence            345679999999999999999999999999986  567999999999876543322  2234467899999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANN 1099 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~ 1099 (1310)
                      +.++|||||||++|||++ |..||.+.+..++...+.....  +...+.+++++.+|+..++. +|.+|++..++
T Consensus       190 ~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i  262 (285)
T d1u59a_         190 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR--MECPPECPPELYALMSDCWIYKWEDRPDFLTV  262 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred             CccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHH
Confidence            999999999999999998 9999999888888777754321  22346789999999999987 56778777665

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.1e-31  Score=295.15  Aligned_cols=150  Identities=27%  Similarity=0.384  Sum_probs=130.0

Q ss_pred             CCeeeec-eecccCceEEEEEEEcCC--CcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEE
Q psy5279         183 DAYDFGD-ELGRGVTGIVYHAVERSS--GRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       183 d~Y~i~~-~LG~GsFG~Vyka~~k~T--g~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      +.|.+.+ +||+|+||+||+|.++.+  +..||||+++.... ...+.+.+|+.+|++|+|||||++++++.+ +.+|||
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence            5677777 499999999999987654  55799999975433 345678999999999999999999999975 468999


Q ss_pred             EecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         259 SELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ||||+||+|.+.+... ..+++.++..++.||+.||+|||++|||||||||+|||++.++  .+||+|||+|+.+...
T Consensus        87 mE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~--~~Kl~DFGla~~~~~~  162 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH--YAKISDFGLSKALGAD  162 (285)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETT--EEEECCCTTCEECTTC
T ss_pred             EEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCC--ceeeccchhhhccccc
Confidence            9999999999987654 5699999999999999999999999999999999999998765  8999999999987654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=1.7e-33  Score=312.76  Aligned_cols=276  Identities=18%  Similarity=0.234  Sum_probs=205.2

Q ss_pred             CCCCCcchhhhhhccccchhhhHHHHh----hccccceeeeeccc--CcchhhhhhHHhhhhhhhchhhHHHHHHhcCCC
Q psy5279         592 EPPTDKYQFISEIHRGKFSVVVKAAEK----ANTENLVAAKLFEY--SHDTLHQVNTEFDNLRSLRHERIASLLEAYKPS  665 (1310)
Q Consensus       592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  665 (1310)
                      |-|.+.|+++.+|-+|.||+|.+|..+    -.++..||.|.+.-  ..+...++.+|...|++|+|+||..+++++...
T Consensus         9 e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~   88 (301)
T d1lufa_           9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG   88 (301)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             cCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccC
Confidence            447889999999999999999998654    24667899999864  334467789999999999999999999998655


Q ss_pred             CcccchhhHHHHhhcCchhhhhhhccccchhhhHHHHHHHhHHHHhhhhhhhhhcccccCCCchhhHHHhhhhccccccc
Q psy5279         666 TTASNIAVLVMEKLQGADVLSYLSSRHEYTEQNVATIISQAWEHYLKKNREQIADTADKSRIPRTIREYREQSANTANLR  745 (1310)
Q Consensus       666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  745 (1310)
                          +...+|||++.|.++..+|.++...........-.+                                        
T Consensus        89 ----~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~----------------------------------------  124 (301)
T d1lufa_          89 ----KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS----------------------------------------  124 (301)
T ss_dssp             ----SSCEEEEECCTTCBHHHHHHHTCC----------------------------------------------------
T ss_pred             ----CceEEEEEecCCCcHHHHHHhcCccccccccccccc----------------------------------------
Confidence                667899999999999888877665543322111000                                        


Q ss_pred             ccccccCCCCCCCCcccccccccccccccccCCcchhhccccCCcchhhHHHHHHhcCCCCcccccccccccCCCCCCCC
Q psy5279         746 DVKTWEDNVPNRGPAIDYDLNVVKSESHYQNGPDTYLLQLRDVDFPVRLREYIKVASTRPDLRLSTGFNCLDTSENGHLD  825 (1310)
Q Consensus       746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  825 (1310)
                                              ....++                                          .       
T Consensus       125 ------------------------~~~~~~------------------------------------------~-------  131 (301)
T d1lufa_         125 ------------------------TRARVS------------------------------------------S-------  131 (301)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ------------------------hhhhcc------------------------------------------c-------
Confidence                                    000000                                          0       


Q ss_pred             CCcchhhhcccccccchhhhHHHHHhhhhccccccchhhhhhhcccCCCchhhHhHHHHHhhhcCCCCCceeecceeeee
Q psy5279         826 WKAPVIRERRRFTDVMDEEIDDERRNRINKYGAADTYTLRRLRHEIGTRPEAHVEADALIESRRDGHAPFFREKPITIPV  905 (1310)
Q Consensus       826 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~a~~~ie~~~~~~~~ffrE~~~~~~l  905 (1310)
                                                                                      .               
T Consensus       132 ----------------------------------------------------------------~---------------  132 (301)
T d1lufa_         132 ----------------------------------------------------------------P---------------  132 (301)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ----------------------------------------------------------------c---------------
Confidence                                                                            0               


Q ss_pred             eeCCEEEEEEeccCCCcceeeecccCCcccccccccCCCchhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCC
Q psy5279         906 VIGDKLEMKCLAVGEPKPVIQWFKLGTSTLCYLPIVIPTTHKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSV  985 (1310)
Q Consensus       906 ~~g~~l~~~~l~~G~p~~vi~~f~~g~~l~~~L~~~i~~~~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~  985 (1310)
                                   +                    ........+..++.||+.||+|||++|||||||||+|||++.  +.
T Consensus       133 -------------~--------------------~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~--~~  177 (301)
T d1lufa_         133 -------------G--------------------PPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGE--NM  177 (301)
T ss_dssp             -----------------------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG--GG
T ss_pred             -------------C--------------------CCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECC--CC
Confidence                         0                    000122335677899999999999999999999999999986  46


Q ss_pred             cEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCCCCccchhHHHHHHHHHhcC-CCCCCCCChhHHHhhhcc
Q psy5279         986 QVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPIFPQTDVWSAGVLAYVLLSG-ASPFRGQSEPETRQNVNF 1063 (1310)
Q Consensus       986 ~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~ys~ksDIWSLGViLyeLLtG-~~PF~g~~~~e~~~~I~~ 1063 (1310)
                      .+||+|||+|+....... .......|++.|+|||.+.+..|+.++|||||||++|||++| .+||.+.+..+....+..
T Consensus       178 ~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~  257 (301)
T d1lufa_         178 VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRD  257 (301)
T ss_dssp             CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT
T ss_pred             cEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHc
Confidence            799999999976533222 122234567899999999999999999999999999999998 478999999888887765


Q ss_pred             ccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1064 VRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1064 ~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      ..  .+.....+++++.+|+.+|+. +|.+|+++.+++
T Consensus       258 ~~--~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~  293 (301)
T d1lufa_         258 GN--ILACPENCPLELYNLMRLCWSKLPADRPSFCSIH  293 (301)
T ss_dssp             TC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CC--CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            44  334456789999999999997 566788888764

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.5e-31  Score=294.62  Aligned_cols=144  Identities=24%  Similarity=0.368  Sum_probs=127.0

Q ss_pred             ceecccCceEEEEEEEc--CCCcEEEEEEEecCC--cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecCCC
Q psy5279         189 DELGRGVTGIVYHAVER--SSGRNYAAKVMTGKG--NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELAGG  264 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k--~Tg~~vAIKiI~~~~--~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~~G  264 (1310)
                      ++||+|+||+||+|.++  .+++.||||+++...  ....+.+.+|+.+|++|+|||||+++++|.++ ..|||||||+|
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEEEEcCCC
Confidence            46999999999999865  456789999996532  23456789999999999999999999999754 57899999999


Q ss_pred             CchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         265 GELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       265 GeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |+|.+.+.....+++.++..++.||+.||+|||++|||||||||+|||++.++  .+||+|||+|+.+...
T Consensus        92 g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~--~~kl~DFGla~~~~~~  160 (277)
T d1xbba_          92 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH--YAKISDFGLSKALRAD  160 (277)
T ss_dssp             EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT--EEEECCCTTCEECCTT
T ss_pred             CcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccC--cccccchhhhhhcccc
Confidence            99999998888899999999999999999999999999999999999998765  8999999999987543

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.5e-32  Score=293.44  Aligned_cols=149  Identities=21%  Similarity=0.306  Sum_probs=128.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecC
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA  262 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~  262 (1310)
                      +.|++.+.||+|+||+||+|.++ +++.||||+++... ...+.+.+|+.+|++++|||||+++++|..++.+|||||||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~   82 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   82 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec
Confidence            57999999999999999999976 56789999997543 34567899999999999999999999999999999999999


Q ss_pred             CCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         263 GGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       263 ~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ++|+|.+.+... ..+++..+..++.||+.||+|||+++|+||||||+|||++.++  .+||+|||+|+.....
T Consensus        83 ~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~--~~Kl~DFGla~~~~~~  154 (263)
T d1sm2a_          83 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ--VIKVSDFGMTRFVLDD  154 (263)
T ss_dssp             TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGG--CEEECSCC--------
T ss_pred             CCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCC--CeEecccchheeccCC
Confidence            999999988654 4588999999999999999999999999999999999998755  8999999999987554

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.8e-32  Score=303.58  Aligned_cols=152  Identities=24%  Similarity=0.358  Sum_probs=128.8

Q ss_pred             ccCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEeC-----
Q psy5279         180 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYETK-----  252 (1310)
Q Consensus       180 ~~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~-----  252 (1310)
                      .+.++|++.+.||+|+||+||+|+++.+|+.||||++++...  ...+.+.+|+.+|+.|+|||||+++++|...     
T Consensus        15 ~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~   94 (348)
T d2gfsa1          15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE   94 (348)
T ss_dssp             EEETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTT
T ss_pred             cCCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeecccccc
Confidence            356889999999999999999999999999999999976433  3345678999999999999999999999743     


Q ss_pred             CeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceee
Q psy5279         253 DSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRI  332 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i  332 (1310)
                      ...++||||+.||+|.+.+.. +.+++.+++.+++||+.||+|||++||+||||||+|||++.++  .+|++|||+|...
T Consensus        95 ~~~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~--~~kl~dfg~a~~~  171 (348)
T d2gfsa1          95 FNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKILDFGLARHT  171 (348)
T ss_dssp             CCCCEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC--CEEECCC----CC
T ss_pred             CceEEEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccc--cccccccchhccc
Confidence            334666778889999988854 5799999999999999999999999999999999999998765  7999999999866


Q ss_pred             cC
Q psy5279         333 TS  334 (1310)
Q Consensus       333 ~~  334 (1310)
                      ..
T Consensus       172 ~~  173 (348)
T d2gfsa1         172 DD  173 (348)
T ss_dssp             TG
T ss_pred             Cc
Confidence            43

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.1e-31  Score=292.32  Aligned_cols=149  Identities=25%  Similarity=0.358  Sum_probs=131.1

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEec
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      .+.|++.+.||+|+||.||+|.++ +++.||||+++... ...+.+.+|+.+|++++|||||++++++. ++.+||||||
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey   88 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEY   88 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEe
Confidence            467999999999999999999975 67889999997543 34567899999999999999999999875 4567999999


Q ss_pred             CCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         262 AGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |++|+|.+.+....  .+++.++..++.||+.||.|||++||+||||||+||||+.++  .+||+|||+|+.+...
T Consensus        89 ~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~--~~Kl~DFGla~~~~~~  162 (272)
T d1qpca_          89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDN  162 (272)
T ss_dssp             CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS--CEEECCCTTCEECSSS
T ss_pred             CCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeeccc--ceeeccccceEEccCC
Confidence            99999998775432  499999999999999999999999999999999999998654  8999999999987553

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=5.6e-33  Score=312.90  Aligned_cols=103  Identities=31%  Similarity=0.496  Sum_probs=85.0

Q ss_pred             hHHHHHHHHHHHHHHHHH-CCceecccCCCcEEEeecCC----CcEEEEeeccceeeccCCcccccCCCCCCcccccccc
Q psy5279         947 KDAYCVTSVLDGLQYLHW-RGLCHLNIEPDNVVMASVRS----VQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVL 1021 (1310)
Q Consensus       947 ~~~~i~~QIl~AL~yLHs-~gIVHRDLKPeNILl~~~~~----~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl 1021 (1310)
                      .+..++.||+.||+|||+ +||+||||||+|||++..+.    ..+|++|||.+......    .....||+.|+|||++
T Consensus       126 ~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~----~~~~~gt~~y~aPE~~  201 (362)
T d1q8ya_         126 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVL  201 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccccc----cccccccccccChhhc
Confidence            356778999999999998 89999999999999976432    25899999998754322    2334678999999999


Q ss_pred             cCCCCCCccchhHHHHHHHHHhcCCCCCCCCC
Q psy5279        1022 AEEPIFPQTDVWSAGVLAYVLLSGASPFRGQS 1053 (1310)
Q Consensus      1022 ~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~ 1053 (1310)
                      .+..|+.++|+||+||++++|++|..||.+..
T Consensus       202 ~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~  233 (362)
T d1q8ya_         202 LGAPWGCGADIWSTACLIFELITGDFLFEPDE  233 (362)
T ss_dssp             HTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             cccCCCccccccchHHHHHHHHHCCCCCCCCc
Confidence            99999999999999999999999999998654

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.5e-31  Score=288.25  Aligned_cols=195  Identities=23%  Similarity=0.366  Sum_probs=155.8

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecC
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA  262 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~  262 (1310)
                      +.|++.++||+|+||+||+|+++ +++.||||++++.. ...+.+.+|+.+|++++|||||+++++|.+++.+++||||+
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~   81 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM   81 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence            56889999999999999999985 78899999998643 34567899999999999999999999999999999999999


Q ss_pred             CCCchHHHhhh-cCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC--
Q psy5279         263 GGGELLHSLTR-QSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN--  339 (1310)
Q Consensus       263 ~GGeL~~~l~~-~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~--  339 (1310)
                      ++|+|...+.. ...+++..+..++.||++||+|||++||+||||||+|||+++++  .+||+|||+|+.+.......  
T Consensus        82 ~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~--~~kl~DfG~a~~~~~~~~~~~~  159 (258)
T d1k2pa_          82 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG--VVKVSDFGLSRYVLDDEYTSSV  159 (258)
T ss_dssp             TTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTC--CEEECCCSSCCBCSSSSCCCCC
T ss_pred             CCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCC--cEEECcchhheeccCCCceeec
Confidence            99999888654 35699999999999999999999999999999999999998654  89999999998775543222  


Q ss_pred             CcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcc-cCCCCCC
Q psy5279         340 PLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYY-RRRPLNS  403 (1310)
Q Consensus       340 ~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~-~r~~~~~  403 (1310)
                      ..++|+.|+     +|++..+                 ..++...| | +|..+...++ ++.|...
T Consensus       160 ~~~~t~~y~-----aPE~~~~-----------------~~~~~ksDiwS~G~~l~el~t~g~~Pf~~  204 (258)
T d1k2pa_         160 GSKFPVRWS-----PPEVLMY-----------------SKFSSKSDIWAFGVLMWEIYSLGKMPYER  204 (258)
T ss_dssp             CSCCCGGGC-----CHHHHHH-----------------CCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             ccCCCCCcC-----CcHHhcC-----------------CCCCcceeecccchhhHhHHhcCCCCCCC
Confidence            234454444     3443211                 22344466 4 6666777665 5666544

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-31  Score=304.73  Aligned_cols=161  Identities=22%  Similarity=0.318  Sum_probs=125.6

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhcCCCCcceEEEEEEe------CC
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN--QYKSLFKNELDIMNQLCHRNLVRLHDSYET------KD  253 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~--~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~------~~  253 (1310)
                      .++|++.++||+|+||+||+|.++.||+.||||++.+...  .....+.+|+.+|++++|||||+++++|..      ..
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~   95 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ   95 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence            3789999999999999999999999999999999976432  334568899999999999999999999964      36


Q ss_pred             eEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeec
Q psy5279         254 SFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  333 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~  333 (1310)
                      .+|+|||||.|+.+ ..+.  ..+++.+++.+++||+.||+|||++||+||||||+|||++.++  .+|++|||+++...
T Consensus        96 ~~~iv~Ey~~~~l~-~~~~--~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~--~~kl~df~~~~~~~  170 (355)
T d2b1pa1          96 DVYLVMELMDANLC-QVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--TLKILDFGLARTAG  170 (355)
T ss_dssp             EEEEEEECCSEEHH-HHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC--CEEECCCCC-----
T ss_pred             eeEEEEeccchHHH-Hhhh--cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccc--ceeeechhhhhccc
Confidence            89999999987644 4443  4699999999999999999999999999999999999998765  79999999999876


Q ss_pred             CCCCCCCcccchHH
Q psy5279         334 SFGKLNPLEYDVRY  347 (1310)
Q Consensus       334 ~~~~l~~~~~t~~y  347 (1310)
                      .....+..++|+.|
T Consensus       171 ~~~~~~~~~~t~~y  184 (355)
T d2b1pa1         171 TSFMMTPYVVTRYY  184 (355)
T ss_dssp             ----------CCTT
T ss_pred             cccccccccccccc
Confidence            65555555555544

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-32  Score=303.22  Aligned_cols=149  Identities=17%  Similarity=0.291  Sum_probs=121.2

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc--cccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL--IHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~--~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||+++........  ......|++.|+|||++.+..+
T Consensus       114 ~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~--~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~  191 (273)
T d1u46a_         114 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT--RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF  191 (273)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE--TTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHhhhCCEeeeeecHHHhcccc--ccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCC
Confidence            445779999999999999999999999999987  467999999999876433221  1222345678999999999999


Q ss_pred             CCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhh
Q psy5279        1027 FPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNI 1100 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L 1100 (1310)
                      +.++|||||||++|||++ |.+||.+.+..+...++.....+++ ....+++++++|+.+|+. +|.+|+++.+++
T Consensus       192 ~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~  266 (273)
T d1u46a_         192 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP-RPEDCPQDIYNVMVQCWAHKPEDRPTFVALR  266 (273)
T ss_dssp             EHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCC-CcccccHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            999999999999999998 8999999999998888776655544 346789999999999887 567788887754

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.1e-32  Score=303.06  Aligned_cols=226  Identities=21%  Similarity=0.354  Sum_probs=169.7

Q ss_pred             CCeeeeceecccCceEEEEEEE---cCCCcEEEEEEEecCC----cchHHHHHHHHHHHHhcCC-CCcceEEEEEEeCCe
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVE---RSSGRNYAAKVMTGKG----NQYKSLFKNELDIMNQLCH-RNLVRLHDSYETKDS  254 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~---k~Tg~~vAIKiI~~~~----~~~~~~~~rEI~IL~~L~H-PNIVkL~d~f~~~~~  254 (1310)
                      ++|++.+.||+|+||+||+|.+   +.+|+.||||++++..    ....+.+.+|+.+|++++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            7799999999999999999997   4579999999986532    2334567899999999966 899999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         255 FTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +|+|||||.||+|.+.+...+.+++..++.+++||+.||+|||++|||||||||+|||++.++  .+||+|||+|+.+..
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~--~vkL~DFG~a~~~~~  181 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG--HVVLTDFGLSKEFVA  181 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--CEEESCSSEEEECCG
T ss_pred             eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCC--CEEEeeccchhhhcc
Confidence            999999999999999998888899999999999999999999999999999999999998765  799999999997643


Q ss_pred             CC--CCCCcccchH---------------------------HHhhhcCCCccccCCCCCCCCCC----Ccchhhhhhhcc
Q psy5279         335 FG--KLNPLEYDVR---------------------------YVRQALRHPWLNFADRKPTEDTP----KLNTDALRNYYN  381 (1310)
Q Consensus       335 ~~--~l~~~~~t~~---------------------------yv~~~~r~P~l~~~~~~~~~~~p----~~~~~~~~~~~~  381 (1310)
                      ..  ...+.+|++.                           |....+..||-............    .........+..
T Consensus       182 ~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  261 (322)
T d1vzoa_         182 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSA  261 (322)
T ss_dssp             GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCH
T ss_pred             cccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCCH
Confidence            21  1122223322                           22234555654322111000000    000000012333


Q ss_pred             cchhhchhhhhhhcccCCC-----CCCccCCCcc
Q psy5279         382 LYKDWYGNAAVRRYYRRRP-----LNSCYTHPSR  410 (1310)
Q Consensus       382 ~~~D~~~~~~l~~~~~r~~-----~~~cl~hpw~  410 (1310)
                      .+.|++...+..+...|++     +++++.|||.
T Consensus       262 ~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff  295 (322)
T d1vzoa_         262 LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF  295 (322)
T ss_dssp             HHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred             HHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhh
Confidence            4567777777778899985     6789999996

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.5e-31  Score=291.88  Aligned_cols=147  Identities=25%  Similarity=0.402  Sum_probs=128.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEEEEecC
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTIISELA  262 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyLVmEy~  262 (1310)
                      ++|++.+.||+|+||+||+|+++.+ +.||||+++.. ....+.+.+|+.+|++++|||||+++++|. .+.+|+|||||
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~   93 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM   93 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEec
Confidence            6799999999999999999998765 56999999644 344567999999999999999999999985 56689999999


Q ss_pred             CCCchHHHhhhc--CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         263 GGGELLHSLTRQ--SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       263 ~GGeL~~~l~~~--~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      ++|+|...+...  ..+++.++..++.||+.||+|||++||+||||||+||||+.++  .+||+|||+|+.+..
T Consensus        94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~--~~kl~DfGla~~~~~  165 (285)
T d1fmka3          94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL--VCKVADFGLARLIED  165 (285)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--CEEECCCCTTC----
T ss_pred             CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCC--cEEEcccchhhhccC
Confidence            999998887643  4699999999999999999999999999999999999998654  899999999987643

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.6e-31  Score=287.12  Aligned_cols=151  Identities=25%  Similarity=0.306  Sum_probs=124.0

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCC---cEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSG---RNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg---~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      .++|++.+.||+|+||+||+|++..++   ..||||.++... ...++.+.+|+.+|++++|||||+++++|. ++.+||
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i   84 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   84 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence            368999999999999999999987654   468888886543 334567899999999999999999999995 567899


Q ss_pred             EEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         258 ISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |||||++|+|.+.+... ..+++.++..++.||+.||.|||++|||||||||+|||+++++  .+||+|||+|+.....
T Consensus        85 v~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~--~~Kl~DfG~a~~~~~~  161 (273)
T d1mp8a_          85 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND--CVKLGDFGLSRYMEDS  161 (273)
T ss_dssp             EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT--EEEECC----------
T ss_pred             EEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCC--cEEEccchhheeccCC
Confidence            99999999999887654 4599999999999999999999999999999999999998765  8999999999976543

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-30  Score=287.57  Aligned_cols=151  Identities=24%  Similarity=0.380  Sum_probs=128.9

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCC----cEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSG----RNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg----~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      .+.|++.+.||+|+||.||+|..+.++    ..||||++.... ......+.+|+.+|++|+|||||++++++.+.+.++
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence            357999999999999999999988765    479999997543 334556889999999999999999999999999999


Q ss_pred             EEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecC
Q psy5279         257 IISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITS  334 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~  334 (1310)
                      +|||||.+|.+.+.+... ..+++.++..++.||+.||+|||++||+||||||+||||+.++  .+||+|||+|+.+..
T Consensus        86 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~--~~Kl~DFGla~~~~~  162 (283)
T d1mqba_          86 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL--VCKVSDFGLSRVLED  162 (283)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC--CEEECCCCC------
T ss_pred             EEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCC--eEEEcccchhhcccC
Confidence            999999999998877654 4699999999999999999999999999999999999998655  899999999998754

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.9e-30  Score=290.39  Aligned_cols=150  Identities=22%  Similarity=0.335  Sum_probs=128.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCc----EEEEEEEecC-CcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGR----NYAAKVMTGK-GNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~----~vAIKiI~~~-~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~lyL  257 (1310)
                      +.|++.+.||+|+||+||+|.++.+|+    .||+|.+... .....+.+.+|+.+|++|+|||||+++++|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            469999999999999999999998887    4777777543 334567799999999999999999999999865 5788


Q ss_pred             EEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         258 ISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       258 VmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      +|||+.+|+|.+.+... ..+++..+..++.||+.||+|||++|||||||||+|||++.++  ++||+|||+|+.+...
T Consensus        88 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~--~~kl~DFGla~~~~~~  164 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKITDFGLAKLLGAE  164 (317)
T ss_dssp             EEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT--EEEECCCSHHHHTTTT
T ss_pred             EEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCC--CeEeeccccceecccc
Confidence            89999999998887654 4699999999999999999999999999999999999998765  8999999999987543

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.2e-32  Score=298.46  Aligned_cols=149  Identities=16%  Similarity=0.287  Sum_probs=111.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc--ccccCCCCCCcccccccccCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT--LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~--~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ..++.||+.||+|||++||+||||||+|||++.  +..+||+|||+|+.......  .......||+.|||||++.+..|
T Consensus       113 ~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~--~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~  190 (283)
T d1mqba_         113 VGMLRGIAAGMKYLANMNYVHRDLAARNILVNS--NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKF  190 (283)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT--TCCEEECCCCC-----------------CCCGGGSCHHHHHSCCC
T ss_pred             HHHHHHHHHhhhhccccccccCccccceEEECC--CCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCC
Confidence            456789999999999999999999999999985  56799999999986543221  12223357889999999999999


Q ss_pred             CCccchhHHHHHHHHHhcC-CCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSG-ASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG-~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|||||||++|||++| .+||.+.+..++...+... .+. .....+++++++++..++. +|.+|+++.+++.
T Consensus       191 ~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~-~~~-~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         191 TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-FRL-PTPMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-CCC-CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhcc-CCC-CCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            9999999999999999995 5666666776666665433 222 2335688999999999986 5678999888764

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.9e-32  Score=302.62  Aligned_cols=150  Identities=19%  Similarity=0.242  Sum_probs=120.4

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ..++.||+.||+|||++|||||||||+|||++.  +..+||+|||+|+........ ......||+.|||||++.++.|+
T Consensus       114 ~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~--~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~  191 (317)
T d1xkka_         114 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT  191 (317)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE--TTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHHcCcccCcchhhcceeCC--CCCeEeeccccceecccccccccccccccCccccChHHHhcCCCC
Confidence            446789999999999999999999999999986  567999999999866433222 22334678999999999999999


Q ss_pred             CccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1028 PQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      .++|||||||++|||++ |.+||.+.+..++...+.... +. .....+++++.+|+.+|+. +|.+|+++.+++.|
T Consensus       192 ~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~-~~-~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         192 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RL-PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTC-CC-CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-CC-CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence            99999999999999998 899999988887776665432 12 2235688999999999886 56789999998876

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.5e-32  Score=296.38  Aligned_cols=145  Identities=18%  Similarity=0.276  Sum_probs=114.0

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIFP 1028 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys~ 1028 (1310)
                      ..++.||+.||.|||+++||||||||+|||++.  ++.+||+|||+++.....    .....+++.|+|||++.+..++.
T Consensus       106 ~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~--~~~~kl~dfg~s~~~~~~----~~~~~~~~~y~aPE~l~~~~~t~  179 (262)
T d1byga_         106 LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE--DNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALREKKFST  179 (262)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT--TSCEEECCCCC----------------CCTTTSCHHHHHHCCCCH
T ss_pred             HHHHHHHHhhccccccCceeccccchHhheecC--CCCEeecccccceecCCC----CccccccccCCChHHHhCCCCCh
Confidence            345679999999999999999999999999985  567999999999765432    12335678999999999999999


Q ss_pred             ccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1029 QTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1029 ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      ++|||||||++|||++ |.+||.+.+..++..++... .+ +.....+++++++|+.+++. +|.+|+++.++++
T Consensus       180 ~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~-~~-~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~  252 (262)
T d1byga_         180 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YK-MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  252 (262)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT-CC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-CC-CCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            9999999999999998 89999998888887777543 12 22345788999999999987 5678999988765

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.1e-31  Score=298.05  Aligned_cols=151  Identities=21%  Similarity=0.303  Sum_probs=123.3

Q ss_pred             hHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc-cccCCCCCCcccccccccCCC
Q psy5279         947 KDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL-IHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       947 ~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~-~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      .+..++.||+.||+|||++|||||||||+|||++.  ++.+||+|||+++........ ......+++.|+|||++.++.
T Consensus       136 ~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~  213 (299)
T d1fgka_         136 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI  213 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT--TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHhhhCCEEeeeecccceeecC--CCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCC
Confidence            35667899999999999999999999999999985  457999999999766443222 223345778999999999999


Q ss_pred             CCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      |+.++|||||||++|+|++ |.+||.+.+..++...+... .++ .....+++++++|+.+|+. +|.+|+++.++++
T Consensus       214 y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~-~~~-~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         214 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG-HRM-DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-CCC-CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcC-CCC-CCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            9999999999999999998 79999998888877766543 222 2345689999999999886 5678999988764

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.6e-30  Score=283.85  Aligned_cols=165  Identities=23%  Similarity=0.360  Sum_probs=140.3

Q ss_pred             CCCeeeeceecccCceEEEEEEEc-----CCCcEEEEEEEecCC-cchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCe
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVER-----SSGRNYAAKVMTGKG-NQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k-----~Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~  254 (1310)
                      .++|++.+.||+|+||.||+|..+     .+++.||||+++... ......+.+|+.+|+++ +|||||+++++|.+++.
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            478999999999999999999863     567899999997643 33455788999999999 69999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhcC------------------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC
Q psy5279         255 FTIISELAGGGELLHSLTRQS------------------YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP  316 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~~------------------~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~  316 (1310)
                      +|||||||+||+|.+.+....                  .+++.++..++.||+.||+|||++|||||||||+|||++.+
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~  181 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG  181 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccccccc
Confidence            999999999999999986432                  48899999999999999999999999999999999999875


Q ss_pred             CCCeEEEEeeccceeecCCCC---CCCcccchHHH
Q psy5279         317 GGRHLLLTDFGLSRRITSFGK---LNPLEYDVRYV  348 (1310)
Q Consensus       317 ~~~~VKLsDFGLAr~i~~~~~---l~~~~~t~~yv  348 (1310)
                      +  .+||+|||+|+.+.....   ....++|+.|+
T Consensus       182 ~--~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~  214 (311)
T d1t46a_         182 R--ITKICDFGLARDIKNDSNYVVKGNARLPVKWM  214 (311)
T ss_dssp             T--EEEECCCGGGSCTTSCTTSEECSSSEECGGGC
T ss_pred             C--cccccccchheeccCCCcceEeeecccChHHc
Confidence            5  899999999998754332   22344455544

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.8e-30  Score=286.06  Aligned_cols=163  Identities=26%  Similarity=0.393  Sum_probs=135.2

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcE--EEEEEEecC-CcchHHHHHHHHHHHHhc-CCCCcceEEEEEEeCCeEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRN--YAAKVMTGK-GNQYKSLFKNELDIMNQL-CHRNLVRLHDSYETKDSFTII  258 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~--vAIKiI~~~-~~~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~~~lyLV  258 (1310)
                      +.|++.++||+|+||+||+|.++.+|..  ||||.++.. .....+.+.+|+.+|+++ +|||||+++++|.+++.+|+|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            6789999999999999999999999875  667777543 233455789999999999 799999999999999999999


Q ss_pred             EecCCCCchHHHhhhc----------------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEE
Q psy5279         259 SELAGGGELLHSLTRQ----------------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLL  322 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~----------------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VK  322 (1310)
                      ||||+||+|.+.+...                ..+++.++..++.||+.||.|||++|||||||||+|||++.++  .+|
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~--~~k  167 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY--VAK  167 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG--CEE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCC--ceE
Confidence            9999999999998643                4689999999999999999999999999999999999998765  899


Q ss_pred             EEeeccceeecCCCCCCCcccchHH
Q psy5279         323 LTDFGLSRRITSFGKLNPLEYDVRY  347 (1310)
Q Consensus       323 LsDFGLAr~i~~~~~l~~~~~t~~y  347 (1310)
                      |+|||+|+...........++|+.|
T Consensus       168 l~DfG~a~~~~~~~~~~~~~gt~~y  192 (309)
T d1fvra_         168 IADFGLSRGQEVYVKKTMGRLPVRW  192 (309)
T ss_dssp             ECCTTCEESSCEECCC----CCTTT
T ss_pred             EccccccccccccccccceecCCcc
Confidence            9999999876544333334444433

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=2.2e-29  Score=277.91  Aligned_cols=198  Identities=17%  Similarity=0.218  Sum_probs=150.8

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCC-cceEEEEEEeCCeEEEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN-LVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPN-IVkL~d~f~~~~~lyLVm  259 (1310)
                      +.++|++.+.||+|+||+||+|+++.+|+.||||++.....  ...+.+|+++|+.++|+| |+.+..++.+.+..++||
T Consensus         5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivm   82 (299)
T d1ckia_           5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   82 (299)
T ss_dssp             ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEE
Confidence            34689999999999999999999999999999999875432  234678999999998776 555667778889999999


Q ss_pred             ecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC-CCCeEEEEeeccceeecCCCC-
Q psy5279         260 ELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP-GGRHLLLTDFGLSRRITSFGK-  337 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~-~~~~VKLsDFGLAr~i~~~~~-  337 (1310)
                      |||.++.+.........+++..+..++.|++.||+|||++|||||||||+|||++.. .+..+||+|||+|+.+..... 
T Consensus        83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~  162 (299)
T d1ckia_          83 ELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  162 (299)
T ss_dssp             ECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred             EEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence            999665444444445679999999999999999999999999999999999998643 245799999999998865332 


Q ss_pred             -------CCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCC
Q psy5279         338 -------LNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       338 -------l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~  402 (1310)
                             ..+.+||+.|++     |+...+                 ..++...| | +|+.+...++.+.|+.
T Consensus       163 ~~~~~~~~~~~~gt~~y~a-----PE~~~~-----------------~~~~~~~DiwSlG~~l~el~tg~~P~~  214 (299)
T d1ckia_         163 QHIPYRENKNLTGTARYAS-----INTHLG-----------------IEQSRRDDLESLGYVLMYFNLGSLPWQ  214 (299)
T ss_dssp             CBCCCCBCCSCCCCSSSCC-----HHHHTT-----------------BCCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             cceeccccCCcCCCccccC-----HHHHhC-----------------CCCCChhhEEecCHHHHHHHhCCCccc
Confidence                   233455555543     333211                 12344466 4 6777777777666654

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.6e-30  Score=282.50  Aligned_cols=166  Identities=22%  Similarity=0.350  Sum_probs=128.2

Q ss_pred             CCCeeeeceecccCceEEEEEEEcC-----CCcEEEEEEEecCCc-chHHHHHHHHHHHHhc-CCCCcceEEEEEEeC-C
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERS-----SGRNYAAKVMTGKGN-QYKSLFKNELDIMNQL-CHRNLVRLHDSYETK-D  253 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~-----Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~-~  253 (1310)
                      .++|++.++||+|+||+||+|.++.     +++.||||+++.... ...+.+.+|+.+|.++ +|||||++++++..+ +
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            3679999999999999999999764     457899999875432 3445677888888776 689999999988654 5


Q ss_pred             eEEEEEecCCCCchHHHhhhc----------------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCC
Q psy5279         254 SFTIISELAGGGELLHSLTRQ----------------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPG  317 (1310)
Q Consensus       254 ~lyLVmEy~~GGeL~~~l~~~----------------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~  317 (1310)
                      .+++|||||+||+|.+.+...                ..+++.++..++.||+.||.|||++|||||||||+||||++++
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~  171 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN  171 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGG
T ss_pred             eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCC
Confidence            689999999999999998643                2488999999999999999999999999999999999998655


Q ss_pred             CCeEEEEeeccceeecCCCC---CCCcccchHHHh
Q psy5279         318 GRHLLLTDFGLSRRITSFGK---LNPLEYDVRYVR  349 (1310)
Q Consensus       318 ~~~VKLsDFGLAr~i~~~~~---l~~~~~t~~yv~  349 (1310)
                        .+||+|||+|+.......   ....+||+.|++
T Consensus       172 --~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~A  204 (299)
T d1ywna1         172 --VVKICDFGLARDIYKDPDYVRKGDARLPLKWMA  204 (299)
T ss_dssp             --CEEECC------CCSCTTSCCTTSCCCGGGGCC
T ss_pred             --cEEEccCcchhhccccccccccCceeeCccccc
Confidence              899999999997654332   234566666654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=6.8e-30  Score=283.57  Aligned_cols=152  Identities=22%  Similarity=0.329  Sum_probs=134.5

Q ss_pred             CCCeeeeceecccCceEEEEEEEc-----CCCcEEEEEEEecCCc-chHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeE
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVER-----SSGRNYAAKVMTGKGN-QYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSF  255 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k-----~Tg~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~l  255 (1310)
                      .++|++.+.||+|+||+||+|+.+     .+++.||||+++.... ...+.+.+|+.+|++++|||||+++++|.+.+.+
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~   91 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM   91 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCce
Confidence            467999999999999999999975     4678999999975433 3456789999999999999999999999999999


Q ss_pred             EEEEecCCCCchHHHhhhcC------------------------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCE
Q psy5279         256 TIISELAGGGELLHSLTRQS------------------------YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDL  311 (1310)
Q Consensus       256 yLVmEy~~GGeL~~~l~~~~------------------------~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNI  311 (1310)
                      ++||||+++|+|.+.+....                        .+++.++..++.||+.||+|||++|||||||||+||
T Consensus        92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NI  171 (301)
T d1lufa_          92 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNC  171 (301)
T ss_dssp             EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             EEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccce
Confidence            99999999999999885422                        378889999999999999999999999999999999


Q ss_pred             EeecCCCCeEEEEeeccceeecCC
Q psy5279         312 LVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       312 LL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      |++.++  .+||+|||+|+.+.+.
T Consensus       172 Lld~~~--~~Kl~DFGls~~~~~~  193 (301)
T d1lufa_         172 LVGENM--VVKIADFGLSRNIYSA  193 (301)
T ss_dssp             EECGGG--CEEECCCSCHHHHTGG
T ss_pred             EECCCC--cEEEccchhheeccCC
Confidence            998654  8999999999876543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.96  E-value=4.3e-29  Score=276.31  Aligned_cols=197  Identities=15%  Similarity=0.235  Sum_probs=156.1

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCC-CCcceEEEEEEeCCeEEEEE
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCH-RNLVRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~H-PNIVkL~d~f~~~~~lyLVm  259 (1310)
                      +..+|++.+.||+|+||+||+|+++.+|+.||||+++....  ...+.+|+++++.|.| |||+.+++++......|+||
T Consensus         3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vm   80 (293)
T d1csna_           3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   80 (293)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEE
Confidence            34689999999999999999999999999999999865432  2346789999999976 89999999999999999999


Q ss_pred             ecCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC---CCCeEEEEeeccceeecCC
Q psy5279         260 ELAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP---GGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       260 Ey~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~---~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ||+ ||+|.+.+...+ .+++..+..++.|++.||+|||++|||||||||+|||++.+   ....+||+|||+|+.....
T Consensus        81 e~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~  159 (293)
T d1csna_          81 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  159 (293)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             Eec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccC
Confidence            999 678888876554 59999999999999999999999999999999999999743   2347999999999987543


Q ss_pred             C--------CCCCcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcccCCCCC
Q psy5279         336 G--------KLNPLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYYRRRPLN  402 (1310)
Q Consensus       336 ~--------~l~~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~~r~~~~  402 (1310)
                      .        ...+.+||+.|++     |+...+                 ..++...| | +|..+...++.++|+.
T Consensus       160 ~~~~~~~~~~~~~~~GT~~y~a-----PE~~~~-----------------~~~~~~~DiwSlG~~l~elltg~~Pf~  214 (293)
T d1csna_         160 VTKQHIPYREKKNLSGTARYMS-----INTHLG-----------------REQSRRDDLEALGHVFMYFLRGSLPWQ  214 (293)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCC-----HHHHTT-----------------CCCCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred             ccccceeecccCceEEchhhcC-----HHHhcC-----------------CCCChHHHHHHhhHHHHHHHhCCCcCC
Confidence            2        2344577777764     443211                 11333456 3 6666777666666554

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.2e-31  Score=296.97  Aligned_cols=149  Identities=18%  Similarity=0.266  Sum_probs=121.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcccccCCCCCCcccccccccCCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTLIHPINTPNPEFAAPEVLAEEPIF 1027 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~~~~~~tGtp~Y~APEvl~~~~ys 1027 (1310)
                      ...++.||+.||.|||++|||||||||+|||++.  ...+||+|||+|+.......  .....||+.|+|||.+.+..|+
T Consensus       129 ~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~--~~~~kl~DfG~a~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~  204 (309)
T d1fvra_         129 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYT  204 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG--GGCEEECCTTCEESSCEECC--C----CCTTTCCHHHHHHCEEC
T ss_pred             HHHHHHHHHHHHHhhhcCCccccccccceEEEcC--CCceEEcccccccccccccc--ccceecCCcccchHHhccCCCC
Confidence            4567889999999999999999999999999986  45799999999875433222  2234577999999999999999


Q ss_pred             CccchhHHHHHHHHHhcC-CCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1028 PQTDVWSAGVLAYVLLSG-ASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1028 ~ksDIWSLGViLyeLLtG-~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      .++|||||||++|||++| .+||.+.+..++...+... .++ .....+++++++||.+|+. +|.+|+++.+++.+
T Consensus       205 ~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~-~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         205 TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YRL-EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT-CCC-CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhc-CCC-CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            999999999999999996 5789999988888777543 222 2346789999999999997 56789999998865

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=3.6e-31  Score=292.39  Aligned_cols=151  Identities=19%  Similarity=0.218  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec-CCCcEEEEeeccceeeccCCc------ccccCCCCCCccccccc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV-RSVQVKLIDLGCTQRVTKLGT------LIHPINTPNPEFAAPEV 1020 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~-~~~~VKL~DFGlAk~~~~~g~------~~~~~~tGtp~Y~APEv 1020 (1310)
                      ...++.|++.||+|||++|||||||||+|||++.. ....+||+|||+|+.......      .......||+.|||||+
T Consensus       105 ~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  184 (299)
T d1ckia_         105 VLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT  184 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHH
Confidence            45567899999999999999999999999998653 345799999999987643221      11233468899999999


Q ss_pred             ccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHHHhhhc---ccc--ccccccchhccHHHHHHHHHhcc-CCcchh
Q psy5279        1021 LAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPETRQNVN---FVR--YRFEYLFKELTQEATRFLMLIFK-HEVDWI 1094 (1310)
Q Consensus      1021 l~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~~~~I~---~~~--~~f~~~~~~lS~eakdLL~~il~-~~~~ri 1094 (1310)
                      +.+..|+.++|||||||++|+|++|..||.+.........+.   ...  ...+...+.+++++.+|+..++. ++.+|+
T Consensus       185 ~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP  264 (299)
T d1ckia_         185 HLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKP  264 (299)
T ss_dssp             HTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCC
T ss_pred             HhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCc
Confidence            999999999999999999999999999998866544332221   111  11233456789999999999885 566787


Q ss_pred             cHHh
Q psy5279        1095 TLAN 1098 (1310)
Q Consensus      1095 t~~e 1098 (1310)
                      +..+
T Consensus       265 ~~~~  268 (299)
T d1ckia_         265 DYSY  268 (299)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            7654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.6e-31  Score=294.61  Aligned_cols=153  Identities=16%  Similarity=0.260  Sum_probs=120.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCC
Q psy5279         946 HKDAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEE 1024 (1310)
Q Consensus       946 ~~~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~ 1024 (1310)
                      .....++.||+.||+|||++|||||||||+|||++.  ...+|++|||+++....... .......||+.|+|||++.+.
T Consensus       145 ~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~--~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  222 (311)
T d1t46a_         145 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNC  222 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEET--TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeecccccccccccc--cCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCC
Confidence            345677899999999999999999999999999985  56799999999986543322 222334568999999999999


Q ss_pred             CCCCccchhHHHHHHHHHhc-CCCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1025 PIFPQTDVWSAGVLAYVLLS-GASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1025 ~ys~ksDIWSLGViLyeLLt-G~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      .++.++|||||||++|+|++ |.+||.+.+..+....+.....+.. ....+++++++||.+|+. ++.+|+++.++++
T Consensus       223 ~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         223 VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML-SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCC-CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC-CcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999998 7788877776555444433333222 235678999999999986 5678999988764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.1e-29  Score=276.92  Aligned_cols=150  Identities=27%  Similarity=0.407  Sum_probs=123.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcC-CCc--EEEEEEEecCC---cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCeEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERS-SGR--NYAAKVMTGKG---NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDSFT  256 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~-Tg~--~vAIKiI~~~~---~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~ly  256 (1310)
                      ++|++.+.||+|+||.||+|+... +++  .||||++.+..   ....+.+.+|+.+|++|+|||||+++++|.+ +.++
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            569999999999999999998653 333  68999986542   2345678999999999999999999999976 4678


Q ss_pred             EEEecCCCCchHHHhhhc-CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         257 IISELAGGGELLHSLTRQ-SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       257 LVmEy~~GGeL~~~l~~~-~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      +|||||++|++.+.+... +.+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||+|||+|+.+...
T Consensus        87 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~--~vkl~DfGl~~~~~~~  164 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD--LVKIGDFGLMRALPQN  164 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT--EEEECCCTTCEECCC-
T ss_pred             eeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcccccc--ceeeccchhhhhcccC
Confidence            999999999998877654 4599999999999999999999999999999999999998765  8999999999987543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.4e-29  Score=275.27  Aligned_cols=190  Identities=22%  Similarity=0.325  Sum_probs=142.3

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEE-eCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYE-TKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~-~~~~lyLVmEy  261 (1310)
                      ++|++.+.||+|+||.||+|..  +|+.||||+++..  ...+.+.+|+.+|++++|||||+++++|. ..+.+||||||
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey   82 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   82 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             HHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence            5689999999999999999987  4789999999643  34567899999999999999999999985 45678999999


Q ss_pred             CCCCchHHHhhhcC--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCCCCCC
Q psy5279         262 AGGGELLHSLTRQS--YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSFGKLN  339 (1310)
Q Consensus       262 ~~GGeL~~~l~~~~--~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~~~l~  339 (1310)
                      +++|+|.+++....  .+++..+..++.||+.||.|||+++|+||||||+|||++.++  .+||+|||+++......  .
T Consensus        83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~--~~kl~dfg~s~~~~~~~--~  158 (262)
T d1byga_          83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN--VAKVSDFGLTKEASSTQ--D  158 (262)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS--CEEECCCCC-----------
T ss_pred             cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCC--CEeecccccceecCCCC--c
Confidence            99999999986543  489999999999999999999999999999999999998765  79999999998764432  1


Q ss_pred             CcccchHHHhhhcCCCccccCCCCCCCCCCCcchhhhhhhcccchh-h-chhhhhhhcc-cCCCCC
Q psy5279         340 PLEYDVRYVRQALRHPWLNFADRKPTEDTPKLNTDALRNYYNLYKD-W-YGNAAVRRYY-RRRPLN  402 (1310)
Q Consensus       340 ~~~~t~~yv~~~~r~P~l~~~~~~~~~~~p~~~~~~~~~~~~~~~D-~-~~~~~l~~~~-~r~~~~  402 (1310)
                      ...+|+.     |.+|+...                 ..-++...| | +|..+...++ +++|..
T Consensus       159 ~~~~~~~-----y~aPE~l~-----------------~~~~t~~sDIwSfG~il~el~t~~~~p~~  202 (262)
T d1byga_         159 TGKLPVK-----WTAPEALR-----------------EKKFSTKSDVWSFGILLWEIYSFGRVPYP  202 (262)
T ss_dssp             ---CCTT-----TSCHHHHH-----------------HCCCCHHHHHHHHHHHHHHHHTTSCCSCT
T ss_pred             ccccccc-----CCChHHHh-----------------CCCCChHHHHHhHHHHHHHHHHCCCCCCC
Confidence            2233322     23344321                 122445567 4 6777777775 555543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.3e-28  Score=275.58  Aligned_cols=148  Identities=22%  Similarity=0.292  Sum_probs=126.6

Q ss_pred             eeeceecccCceEEEEEEEcCCC---cEEEEEEEecC-CcchHHHHHHHHHHHHhcCCCCcceEEEEEEe-CCeEEEEEe
Q psy5279         186 DFGDELGRGVTGIVYHAVERSSG---RNYAAKVMTGK-GNQYKSLFKNELDIMNQLCHRNLVRLHDSYET-KDSFTIISE  260 (1310)
Q Consensus       186 ~i~~~LG~GsFG~Vyka~~k~Tg---~~vAIKiI~~~-~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~-~~~lyLVmE  260 (1310)
                      .+.++||+|+||+||+|.+..++   ..||||+++.. .....+.+.+|+++|++|+|||||++++++.. ++.+++|||
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEE
Confidence            34678999999999999987654   36899999753 33455679999999999999999999999765 568999999


Q ss_pred             cCCCCchHHHhhhcC-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEeeccceeecCC
Q psy5279         261 LAGGGELLHSLTRQS-YYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRITSF  335 (1310)
Q Consensus       261 y~~GGeL~~~l~~~~-~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~i~~~  335 (1310)
                      ||++|+|.+.+.... .+++..+..++.|++.||.|||++||+||||||+||||++++  .+||+|||+|+.....
T Consensus       110 ~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~--~~kL~DFG~~~~~~~~  183 (311)
T d1r0pa_         110 YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDK  183 (311)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC--CEEECSSGGGCCTTTT
T ss_pred             EeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCC--CEEEecccchhhcccc
Confidence            999999999887544 477888999999999999999999999999999999997654  8999999999987554

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.9e-29  Score=275.98  Aligned_cols=166  Identities=22%  Similarity=0.356  Sum_probs=135.3

Q ss_pred             CCCeeeeceecccCceEEEEEEEcCCC-------cEEEEEEEecCCc-chHHHHHHHHHHHHhc-CCCCcceEEEEEEeC
Q psy5279         182 TDAYDFGDELGRGVTGIVYHAVERSSG-------RNYAAKVMTGKGN-QYKSLFKNELDIMNQL-CHRNLVRLHDSYETK  252 (1310)
Q Consensus       182 ~d~Y~i~~~LG~GsFG~Vyka~~k~Tg-------~~vAIKiI~~~~~-~~~~~~~rEI~IL~~L-~HPNIVkL~d~f~~~  252 (1310)
                      .++|++.+.||+|+||.||+|++..++       ..||||+++.... .....+.+|+.+|.++ +|||||+++++|.++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            478999999999999999999987665       3799999976433 3456688899999888 799999999999999


Q ss_pred             CeEEEEEecCCCCchHHHhhhc----------------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecC
Q psy5279         253 DSFTIISELAGGGELLHSLTRQ----------------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHP  316 (1310)
Q Consensus       253 ~~lyLVmEy~~GGeL~~~l~~~----------------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~  316 (1310)
                      +.+|+|||||++|+|.+.+...                ..+++.++..++.||+.||+|||++|||||||||+|||++.+
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~  171 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED  171 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCC
Confidence            9999999999999999998644                248999999999999999999999999999999999999876


Q ss_pred             CCCeEEEEeeccceeecCCCC---CCCcccchHHHh
Q psy5279         317 GGRHLLLTDFGLSRRITSFGK---LNPLEYDVRYVR  349 (1310)
Q Consensus       317 ~~~~VKLsDFGLAr~i~~~~~---l~~~~~t~~yv~  349 (1310)
                      +  .+||+|||+++.......   ....++|+.|++
T Consensus       172 ~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a  205 (299)
T d1fgka_         172 N--VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA  205 (299)
T ss_dssp             C--CEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSC
T ss_pred             C--CeEeccchhhccccccccccccccCCCChhhhh
Confidence            5  799999999998765432   233455555543

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2e-30  Score=289.33  Aligned_cols=150  Identities=17%  Similarity=0.224  Sum_probs=123.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCc-ccccCCCCCCcccccccccCCCC
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGT-LIHPINTPNPEFAAPEVLAEEPI 1026 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~-~~~~~~tGtp~Y~APEvl~~~~y 1026 (1310)
                      ...++.||+.||.|||+++|+||||||+|||++.  +..+||+|||+|+....... .......+++.|+|||.+.+..+
T Consensus       135 ~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~--~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~  212 (308)
T d1p4oa_         135 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVF  212 (308)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECT--TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHhhCCeeeceEcCCceeecC--CceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCC
Confidence            4557889999999999999999999999999985  56799999999976543322 22333457899999999999999


Q ss_pred             CCccchhHHHHHHHHHhcC-CCCCCCCChhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhC
Q psy5279        1027 FPQTDVWSAGVLAYVLLSG-ASPFRGQSEPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNID 1101 (1310)
Q Consensus      1027 s~ksDIWSLGViLyeLLtG-~~PF~g~~~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~ 1101 (1310)
                      +.++|||||||++|||++| .+||.+.+..+....+....  .+...+.+++++++++.+|+. +|.+|+++.++++
T Consensus       213 ~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~--~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~  287 (308)
T d1p4oa_         213 TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG--LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS  287 (308)
T ss_dssp             CHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCC--CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            9999999999999999997 58999998888877765433  233346788999999999986 5678999988775

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.3e-29  Score=277.10  Aligned_cols=153  Identities=22%  Similarity=0.338  Sum_probs=133.5

Q ss_pred             cCCCeeeeceecccCceEEEEEEEcC-----CCcEEEEEEEecCC-cchHHHHHHHHHHHHhcCCCCcceEEEEEEeCCe
Q psy5279         181 ITDAYDFGDELGRGVTGIVYHAVERS-----SGRNYAAKVMTGKG-NQYKSLFKNELDIMNQLCHRNLVRLHDSYETKDS  254 (1310)
Q Consensus       181 ~~d~Y~i~~~LG~GsFG~Vyka~~k~-----Tg~~vAIKiI~~~~-~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~~  254 (1310)
                      ..++|++.+.||+|+||.||+|.++.     +++.||||+++... ......+.+|+.+|++++|||||+++++|..++.
T Consensus        18 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~   97 (308)
T d1p4oa_          18 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   97 (308)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCc
Confidence            34789999999999999999998863     46789999997543 2344568899999999999999999999999999


Q ss_pred             EEEEEecCCCCchHHHhhhc----------CCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEE
Q psy5279         255 FTIISELAGGGELLHSLTRQ----------SYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLT  324 (1310)
Q Consensus       255 lyLVmEy~~GGeL~~~l~~~----------~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLs  324 (1310)
                      +++|||||++|+|.+.+...          ..+++..+..++.|++.||.|||+++|+||||||+|||++.+.  ++||+
T Consensus        98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~--~~Kl~  175 (308)
T d1p4oa_          98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF--TVKIG  175 (308)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC--CEEEC
T ss_pred             eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCc--eEEEe
Confidence            99999999999998887532          2478889999999999999999999999999999999998654  89999


Q ss_pred             eeccceeecCC
Q psy5279         325 DFGLSRRITSF  335 (1310)
Q Consensus       325 DFGLAr~i~~~  335 (1310)
                      |||+|+.+...
T Consensus       176 DFGla~~~~~~  186 (308)
T d1p4oa_         176 DFGMTRDIYET  186 (308)
T ss_dssp             CTTCCCGGGGG
T ss_pred             ecccceeccCC
Confidence            99999976543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.1e-28  Score=272.50  Aligned_cols=162  Identities=22%  Similarity=0.291  Sum_probs=131.5

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCcceEEEEEEeCC----eEEEE
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNLVRLHDSYETKD----SFTII  258 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNIVkL~d~f~~~~----~lyLV  258 (1310)
                      ..|.+.+.||+|+||.||+|+.  +|+.||||+++... ......+.|+..+.+++|||||++++++.+++    .+|||
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~-~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc-hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence            4688999999999999999985  68999999996432 11222344555667889999999999998765    68999


Q ss_pred             EecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhh--------CCeeecCCCCCCEEeecCCCCeEEEEeeccce
Q psy5279         259 SELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHR--------LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  330 (1310)
Q Consensus       259 mEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs--------~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr  330 (1310)
                      ||||++|+|.+.+.+. .++..+...++.|++.||.|||+        +|||||||||+||||+.++  .+||+|||+|+
T Consensus        80 ~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~--~~Kl~DFGl~~  156 (303)
T d1vjya_          80 SDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG--TCCIADLGLAV  156 (303)
T ss_dssp             EECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTS--CEEECCCTTCE
T ss_pred             EecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCC--CeEEEecCccc
Confidence            9999999999999764 68999999999999999999996        6999999999999998655  89999999999


Q ss_pred             eecCCC-----CCCCcccchHHHhh
Q psy5279         331 RITSFG-----KLNPLEYDVRYVRQ  350 (1310)
Q Consensus       331 ~i~~~~-----~l~~~~~t~~yv~~  350 (1310)
                      ......     .....+||+.|+++
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aP  181 (303)
T d1vjya_         157 RHDSATDTIDIAPNHRVGTKRYMAP  181 (303)
T ss_dssp             EEETTTTEECC----CCSCGGGCCH
T ss_pred             cccCCCcceeccccceecccCcCCh
Confidence            886543     22345677766653

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.95  E-value=8.2e-30  Score=282.16  Aligned_cols=149  Identities=13%  Similarity=0.153  Sum_probs=110.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCceecccCCCcEEEeec---CCCcEEEEeeccceeeccCCc------ccccCCCCCCccccc
Q psy5279         948 DAYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASV---RSVQVKLIDLGCTQRVTKLGT------LIHPINTPNPEFAAP 1018 (1310)
Q Consensus       948 ~~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~---~~~~VKL~DFGlAk~~~~~g~------~~~~~~tGtp~Y~AP 1018 (1310)
                      ...++.|++.||+|||++|||||||||+|||++..   ....+||+|||+|+.......      .......|||.||||
T Consensus       103 ~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aP  182 (293)
T d1csna_         103 VAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI  182 (293)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCH
T ss_pred             HHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCH
Confidence            34567899999999999999999999999999752   245799999999986543211      112234689999999


Q ss_pred             ccccCCCCCCccchhHHHHHHHHHhcCCCCCCCCChhHH---Hhhhcccc--ccccccchhccHHHHHHHHHhcc-CCcc
Q psy5279        1019 EVLAEEPIFPQTDVWSAGVLAYVLLSGASPFRGQSEPET---RQNVNFVR--YRFEYLFKELTQEATRFLMLIFK-HEVD 1092 (1310)
Q Consensus      1019 Evl~~~~ys~ksDIWSLGViLyeLLtG~~PF~g~~~~e~---~~~I~~~~--~~f~~~~~~lS~eakdLL~~il~-~~~~ 1092 (1310)
                      |++.+..++.++|||||||++|+|++|..||.+......   ...+....  ...+...+.++++..+++..++. .+.+
T Consensus       183 E~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~  262 (293)
T d1csna_         183 NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDA  262 (293)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTC
T ss_pred             HHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCccc
Confidence            999999999999999999999999999999987654322   22222211  11223446688899999987765 3445


Q ss_pred             hhcH
Q psy5279        1093 WITL 1096 (1310)
Q Consensus      1093 rit~ 1096 (1310)
                      |++.
T Consensus       263 rP~y  266 (293)
T d1csna_         263 TPDY  266 (293)
T ss_dssp             CCCH
T ss_pred             CcCH
Confidence            6543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.1e-30  Score=284.95  Aligned_cols=99  Identities=20%  Similarity=0.294  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHH--------CCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc---cccCCCCCCcccccc
Q psy5279         951 CVTSVLDGLQYLHW--------RGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---IHPINTPNPEFAAPE 1019 (1310)
Q Consensus       951 i~~QIl~AL~yLHs--------~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~---~~~~~tGtp~Y~APE 1019 (1310)
                      ++.|++.||.|||+        +|||||||||+|||++.  ++.+||+|||+++........   ......||+.|||||
T Consensus       105 ~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~--~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE  182 (303)
T d1vjya_         105 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK--NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE  182 (303)
T ss_dssp             HHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECT--TSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHH
T ss_pred             HHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcC--CCCeEEEecCccccccCCCcceeccccceecccCcCChh
Confidence            45699999999996        69999999999999975  567999999999876543221   122345789999999


Q ss_pred             cccCCC------CCCccchhHHHHHHHHHhcCCCCCCC
Q psy5279        1020 VLAEEP------IFPQTDVWSAGVLAYVLLSGASPFRG 1051 (1310)
Q Consensus      1020 vl~~~~------ys~ksDIWSLGViLyeLLtG~~PF~g 1051 (1310)
                      ++.+..      ++.++|||||||++|||++|..||..
T Consensus       183 ~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~  220 (303)
T d1vjya_         183 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI  220 (303)
T ss_dssp             HHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred             hccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCc
Confidence            987653      56789999999999999999988854

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.3e-29  Score=281.61  Aligned_cols=150  Identities=15%  Similarity=0.159  Sum_probs=113.3

Q ss_pred             HHHHHHHHHHHHHHHHCCceecccCCCcEEEeecCCCcEEEEeeccceeeccCCcc---cccCCCCCCcccccccccCCC
Q psy5279         949 AYCVTSVLDGLQYLHWRGLCHLNIEPDNVVMASVRSVQVKLIDLGCTQRVTKLGTL---IHPINTPNPEFAAPEVLAEEP 1025 (1310)
Q Consensus       949 ~~i~~QIl~AL~yLHs~gIVHRDLKPeNILl~~~~~~~VKL~DFGlAk~~~~~g~~---~~~~~tGtp~Y~APEvl~~~~ 1025 (1310)
                      ..++.|++.||.|||++||+||||||+|||++.  ...+||+|||+++........   ......||+.|+|||++....
T Consensus       133 ~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~--~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  210 (311)
T d1r0pa_         133 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE--KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK  210 (311)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT--TCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCC
T ss_pred             HHHHHHHHHhhhhhcccCcccCCccHHhEeECC--CCCEEEecccchhhccccccccceecccccccccccChHHHhcCC
Confidence            345779999999999999999999999999975  567999999999865432221   112235678999999999999


Q ss_pred             CCCccchhHHHHHHHHHhcCCCCCCCCC-hhHHHhhhccccccccccchhccHHHHHHHHHhcc-CCcchhcHHhhhCC
Q psy5279        1026 IFPQTDVWSAGVLAYVLLSGASPFRGQS-EPETRQNVNFVRYRFEYLFKELTQEATRFLMLIFK-HEVDWITLANNIDH 1102 (1310)
Q Consensus      1026 ys~ksDIWSLGViLyeLLtG~~PF~g~~-~~e~~~~I~~~~~~f~~~~~~lS~eakdLL~~il~-~~~~rit~~e~L~H 1102 (1310)
                      ++.++|||||||++|||++|..||.... ..+....+....  .+...+.+++++.+|+.+|+. +|.+|+++.++++|
T Consensus       211 ~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~--~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         211 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC--CCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            9999999999999999999777776543 333333333221  122335678999999999886 56789999988865

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=9.4e-27  Score=261.75  Aligned_cols=166  Identities=20%  Similarity=0.327  Sum_probs=130.8

Q ss_pred             ccC-CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC-----------CCCcceEEE
Q psy5279         180 PIT-DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-----------HRNLVRLHD  247 (1310)
Q Consensus       180 ~~~-d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~-----------HPNIVkL~d  247 (1310)
                      .|. .+|+++++||+|+||+||+|+++.+|+.||||++++.. ...+.+.+|+.+|+.++           |||||++++
T Consensus         9 ~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~   87 (362)
T d1q8ya_           9 PYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD   87 (362)
T ss_dssp             EETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred             CccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEE
Confidence            344 46999999999999999999999999999999997542 33456788999998886           578999998


Q ss_pred             EEEe--CCeEEEEEecCCCCchHHH---hhhcCCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCCEEeecCCC---
Q psy5279         248 SYET--KDSFTIISELAGGGELLHS---LTRQSYYTEYDIAHYIRQLLSGLDYMHR-LSIAHLGLTPGDLLVAHPGG---  318 (1310)
Q Consensus       248 ~f~~--~~~lyLVmEy~~GGeL~~~---l~~~~~lsE~~i~~ii~QIl~GL~YLHs-~gIVHRDLKPeNILL~~~~~---  318 (1310)
                      ++..  ....+++|+++.++.....   ......+++..++.++.||+.||+|||+ +||+||||||+|||++.++.   
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~  167 (362)
T d1q8ya_          88 HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPEN  167 (362)
T ss_dssp             EEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTT
T ss_pred             EeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccc
Confidence            8864  4677888888766643222   2334569999999999999999999997 89999999999999986543   


Q ss_pred             -CeEEEEeeccceeecCCCCCCCcccchHHH
Q psy5279         319 -RHLLLTDFGLSRRITSFGKLNPLEYDVRYV  348 (1310)
Q Consensus       319 -~~VKLsDFGLAr~i~~~~~l~~~~~t~~yv  348 (1310)
                       ..+||+|||+|+.....  ....++|+.|+
T Consensus       168 ~~~~kl~dfg~s~~~~~~--~~~~~gt~~y~  196 (362)
T d1q8ya_         168 LIQIKIADLGNACWYDEH--YTNSIQTREYR  196 (362)
T ss_dssp             EEEEEECCCTTCEETTBC--CCSCCSCGGGC
T ss_pred             cceeeEeecccccccccc--ccccccccccc
Confidence             25999999999876432  23445555544

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.88  E-value=9.2e-23  Score=211.08  Aligned_cols=134  Identities=16%  Similarity=0.161  Sum_probs=108.1

Q ss_pred             eeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCc------------------chHHHHHHHHHHHHhcCCCCcceEE
Q psy5279         185 YDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGN------------------QYKSLFKNELDIMNQLCHRNLVRLH  246 (1310)
Q Consensus       185 Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~------------------~~~~~~~rEI~IL~~L~HPNIVkL~  246 (1310)
                      |.+++.||+|+||+||+|.+. +|+.||||++.....                  .......+|...|.++.|++++..+
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~   80 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY   80 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEE
Confidence            468899999999999999874 799999998753110                  0122345789999999999999988


Q ss_pred             EEEEeCCeEEEEEecCCCCchHHHhhhcCCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCCEEeecCCCCeEEEEee
Q psy5279         247 DSYETKDSFTIISELAGGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDF  326 (1310)
Q Consensus       247 d~f~~~~~lyLVmEy~~GGeL~~~l~~~~~lsE~~i~~ii~QIl~GL~YLHs~gIVHRDLKPeNILL~~~~~~~VKLsDF  326 (1310)
                      ++..    .+|||||++++.+.+       +++..+..++.|++.||.|||++||+||||||+|||++.+   .++|+||
T Consensus        81 ~~~~----~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~---~~~liDF  146 (191)
T d1zara2          81 AWEG----NAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE---GIWIIDF  146 (191)
T ss_dssp             EEET----TEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT---EEEECCC
T ss_pred             EecC----CEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC---CEEEEEC
Confidence            6632    279999999876532       4455677899999999999999999999999999999843   4899999


Q ss_pred             ccceeec
Q psy5279         327 GLSRRIT  333 (1310)
Q Consensus       327 GLAr~i~  333 (1310)
                      |+|+...
T Consensus       147 G~a~~~~  153 (191)
T d1zara2         147 PQSVEVG  153 (191)
T ss_dssp             TTCEETT
T ss_pred             CCcccCC
Confidence            9998764

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.31  E-value=1.9e-13  Score=140.40  Aligned_cols=66  Identities=17%  Similarity=0.142  Sum_probs=56.4

Q ss_pred             CCCCCCCchhhHHHHhccCCCHHHHHHHHHHHHHHhhhhccCCceecCCCCCCeEeccCCCCcEEEecccccchhc
Q psy5279         458 VPNRGPGGELLHSLTRQSYYTEYDIAHYIRQLLSGLDYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRRIT  533 (1310)
Q Consensus       458 v~e~~~~~el~~~~~~~~~~~e~~~~~~~~qi~~~~~y~H~~~i~hrDlkp~Nil~~~~~~~~ikl~DfG~a~~~~  533 (1310)
                      ++|+++++.+       ..+++.++..++.||+.+|.|||++|||||||||+|||++++   .++|+|||+|+...
T Consensus        88 vme~~~~~~~-------~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~---~~~liDFG~a~~~~  153 (191)
T d1zara2          88 LMELIDAKEL-------YRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE---GIWIIDFPQSVEVG  153 (191)
T ss_dssp             EEECCCCEEG-------GGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT---EEEECCCTTCEETT
T ss_pred             EEEeeccccc-------cchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC---CEEEEECCCcccCC
Confidence            5677777654       237888899999999999999999999999999999999853   49999999997654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.05  E-value=1.4e-05  Score=83.42  Aligned_cols=87  Identities=14%  Similarity=0.051  Sum_probs=62.1

Q ss_pred             CCeeeeceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcC-CCCcceEEEEEEeCCeEEEEEec
Q psy5279         183 DAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLC-HRNLVRLHDSYETKDSFTIISEL  261 (1310)
Q Consensus       183 d~Y~i~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~-HPNIVkL~d~f~~~~~lyLVmEy  261 (1310)
                      ..|.+.+..+-|+-+.||+..  ..++.+.+|+...........+.+|..+|..|. +--+.+++.+...++..|+||++
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~   91 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE   91 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred             hceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEe
Confidence            345666655555567899874  466778889876543333445678999988874 33467888888899999999999


Q ss_pred             CCCCchHHHh
Q psy5279         262 AGGGELLHSL  271 (1310)
Q Consensus       262 ~~GGeL~~~l  271 (1310)
                      ++|..+....
T Consensus        92 l~G~~~~~~~  101 (263)
T d1j7la_          92 ADGVLCSEEY  101 (263)
T ss_dssp             CSSEEHHHHT
T ss_pred             cccccccccc
Confidence            9998775543

>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1.5e-05  Score=72.73  Aligned_cols=39  Identities=15%  Similarity=0.186  Sum_probs=35.9

Q ss_pred             cccCCCceEEEEEEcccccceeeEEEEEecCCCCccccc
Q psy5279           4 CIGRDEGLYSVIARNIASTISHSVTVHVEDNENEYSYRT   42 (1310)
Q Consensus         4 ~~~~d~G~Yt~~~~n~~g~~~~~~s~~v~~~p~pp~~~~   42 (1310)
                      .-.+|+|.|+|+|+|..|.++.+++|.|.|+|+||.+.|
T Consensus        63 ~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~P~pP~g~P  101 (101)
T d2cqva1          63 ARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPDPPAGTP  101 (101)
T ss_dssp             CCTTTCEEEEEEEECSSCEEECCEEEEEECSCSCCCCCT
T ss_pred             CCcccCEEEEEEEEECCCEEEEEEEEEEEecCCCcCCCC
Confidence            346899999999999999999999999999999998765

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.34  E-value=0.00036  Score=78.46  Aligned_cols=78  Identities=17%  Similarity=0.144  Sum_probs=49.9

Q ss_pred             eceecccCceEEEEEEEcCCCcEEEEEEEecC----C---cchHHHHHHHHHHHHhcC-C--CCcceEEEEEEeCCeEEE
Q psy5279         188 GDELGRGVTGIVYHAVERSSGRNYAAKVMTGK----G---NQYKSLFKNELDIMNQLC-H--RNLVRLHDSYETKDSFTI  257 (1310)
Q Consensus       188 ~~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~----~---~~~~~~~~rEI~IL~~L~-H--PNIVkL~d~f~~~~~lyL  257 (1310)
                      .++||.|....||++....+|+.+.+|.-...    .   ....+....|...|+.+. +  ..+.+++.+  +++..++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            45789999999999988888889999965321    1   112233556888887663 2  345566654  4455678


Q ss_pred             EEecCCCCch
Q psy5279         258 ISELAGGGEL  267 (1310)
Q Consensus       258 VmEy~~GGeL  267 (1310)
                      |||++.+..+
T Consensus       109 vmE~L~~~~~  118 (392)
T d2pula1         109 VMEDLSHLKI  118 (392)
T ss_dssp             EECCCTTSEE
T ss_pred             EEeccCCccc
Confidence            9999987644

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.25  E-value=0.0012  Score=67.92  Aligned_cols=73  Identities=11%  Similarity=0.033  Sum_probs=51.0

Q ss_pred             ecccC-ceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCC--CCcceEEEEEEeCCeEEEEEecCCCCch
Q psy5279         191 LGRGV-TGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCH--RNLVRLHDSYETKDSFTIISELAGGGEL  267 (1310)
Q Consensus       191 LG~Gs-FG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~H--PNIVkL~d~f~~~~~lyLVmEy~~GGeL  267 (1310)
                      +..|. -+.||+.. ..+|..+.+|.-....   ...+.+|...|+.|..  -.+.+++.+..+++..++|||+++|-.+
T Consensus        18 ~~~G~s~~~v~r~~-~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          18 QTIGCSDAAVFRLS-AQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             CSCTTSSCEEEEEE-CTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             cCCcccCCeEEEEE-eCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            34444 36788875 3556678888765432   2236678888887743  3366788888889999999999998654

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.00049  Score=63.12  Aligned_cols=91  Identities=14%  Similarity=0.072  Sum_probs=59.8

Q ss_pred             eEEEEEecCCCCcccccccccccccccCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEee
Q psy5279          26 SVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHV  105 (1310)
Q Consensus        26 ~~s~~v~~~p~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~  105 (1310)
                      |+.|.|.+.|+||..+. +....+  ....+.-.|..+.++|+.++||.++.+.....   ++..........+++++..
T Consensus         2 s~~l~v~~~P~~P~~p~-~~~~~~--~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~i~~   75 (108)
T d1wf5a1           2 SAHLRVRQLPHAPEHPV-ATLSTV--ERRAINLTWTKPFDGNSPLIRYILEMSENNAP---WTVLLASVDPKATSVTVKG   75 (108)
T ss_dssp             CCCSSCCCCCCCCSSCE-EEECSS--STTEEEEECCCCCCCSSCEEEEEEEEECTTCC---CEEEESSCCTTCCEEEEES
T ss_pred             ccccEEecCCCCCCCCE-EEEEec--cCCEEEEEEECCCCCCCccEEEEEEEEeccCC---ceEEeeeecCCccEEEECC
Confidence            56788999999986543 321122  23334444566678888899999988865433   2222222222346688999


Q ss_pred             ecCCceeEEEEeecCcc
Q psy5279         106 EDNENEYSYRTYARGRQ  122 (1310)
Q Consensus       106 ~~~~~~y~frt~~~n~~  122 (1310)
                      +.+...|.|+|.|.|..
T Consensus        76 L~p~t~Y~frV~A~N~~   92 (108)
T d1wf5a1          76 LVPARSYQFRLCAVNDV   92 (108)
T ss_dssp             CCTTCEEEEEEEEEESS
T ss_pred             CCCCCEEEEEEEEEcCC
Confidence            99999999999998744

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.00093  Score=61.97  Aligned_cols=93  Identities=15%  Similarity=0.071  Sum_probs=61.5

Q ss_pred             cceeeEEEEEecCCCCcccccccccccccccCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeE
Q psy5279          22 TISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSV  101 (1310)
Q Consensus        22 ~~~~~~s~~v~~~p~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~  101 (1310)
                      +.+.+.++.|.|.|+||.. +.+  ..+ +.+ .+.-.|....+.|..++||+++.......  ..|+.+.. ....+++
T Consensus         3 s~s~~~~~~~~~~P~pP~~-~~v--~~~-~~~-sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~-~~~~~~~   74 (117)
T d1uema_           3 SGSSGKNYDLSDLPGPPSK-PQV--TDV-TKN-SVTLSWQPGTPGTLPASAYIIEAFSQSVS--NSWQTVAN-HVKTTLY   74 (117)
T ss_dssp             CCCCSSCCCSCCSCBCCCC-CEE--EEE-CSS-CEEEECCCCBCSSSCCCEEEEEEEETTTE--EEEEEEEE-EECSSEE
T ss_pred             CCcCCCcceeCccCcCCCC-CEE--EEc-cCC-EEEEEEECCCcCCCCeEEEEEEEeccCCc--eeeEEecc-ccccccc
Confidence            3445566788999998853 333  123 333 34445577888888899999987755332  22333321 1234668


Q ss_pred             EEeeecCCceeEEEEeecCcc
Q psy5279         102 TVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus       102 t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      ++..+.+...|.|+|+|.|..
T Consensus        75 ~v~~L~p~t~Y~frV~A~N~~   95 (117)
T d1uema_          75 TVRGLRPNTIYLFMVRAINPQ   95 (117)
T ss_dssp             EECSCCTTCEEEEEEEEEETT
T ss_pred             eECCCCCCCEEEEEEEEEeCC
Confidence            899999999999999998754

>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: NT3 binding domain of trkC receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.00049  Score=62.84  Aligned_cols=33  Identities=21%  Similarity=0.296  Sum_probs=31.3

Q ss_pred             cCCCceEEEEEEcccccceeeEEEEEecCCCCc
Q psy5279           6 GRDEGLYSVIARNIASTISHSVTVHVEDNENEY   38 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~~~~~s~~v~~~p~pp   38 (1310)
                      .+|+|.|||+|+|..|+++++++|.|.++|.|+
T Consensus        71 ~~D~G~Y~C~a~N~~G~~~~~~~v~V~~~P~P~  103 (105)
T d1wwca_          71 HYNNGNYTLIAKNPLGTANQTINGHFLKEPFPV  103 (105)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEEECCSCCCCCS
T ss_pred             cccceEEEEEEEcCCCEEEEEEEEEEEeCCCCC
Confidence            479999999999999999999999999999986

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.50  E-value=0.0023  Score=57.28  Aligned_cols=84  Identities=11%  Similarity=0.047  Sum_probs=53.6

Q ss_pred             EecCCCCcccccccccccccccCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCc
Q psy5279          31 VEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNEN  110 (1310)
Q Consensus        31 v~~~p~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~  110 (1310)
                      |.|+|+||..-.      +...+..+.-.|..+.+.|+.++||.++.+.......... .... .....++++..+.+..
T Consensus         2 V~dvP~~P~~~~------v~~~~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~L~p~t   73 (100)
T d1cfba1           2 VQDVPNAPKLTG------ITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDA-AYEK-VPNTDSSFVVQMSPWA   73 (100)
T ss_dssp             CCCCCCCCEEEE------EEECSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEE-EEEE-EETTCSEEEEECCSSE
T ss_pred             cccCCCcCcCcE------EEEcCCEEEEEEcCCcccccceEEEEEEEecCCCCceeeE-Eeee-cCCceEEEEecCCCCC
Confidence            678999885221      1112233444567888888889999999876543322221 1211 1124557788899999


Q ss_pred             eeEEEEeecCcc
Q psy5279         111 EYSYRTYARGRQ  122 (1310)
Q Consensus       111 ~y~frt~~~n~~  122 (1310)
                      .|.|++.|.|..
T Consensus        74 ~Y~frV~A~n~~   85 (100)
T d1cfba1          74 NYTFRVIAFNKI   85 (100)
T ss_dssp             EEEEEEEEEETT
T ss_pred             EEEEEEEEEeCC
Confidence            999999998854

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.32  E-value=0.0038  Score=56.14  Aligned_cols=70  Identities=11%  Similarity=-0.066  Sum_probs=48.5

Q ss_pred             ccCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCccc
Q psy5279          51 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQV  123 (1310)
Q Consensus        51 ~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~~  123 (1310)
                      +.++..+.|--+.+++|..++||.++.+...++  .|.+... .....+++++..+.+...|.|+|+|.|..+
T Consensus        14 ~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~--~~~~~~~-~~~~~~~~~v~~L~~~~~Y~frV~A~n~~G   83 (98)
T d1x5ya1          14 TDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSE--EWVPANK-EPVERCGFTVKDLPTGARILFRVVGVNIAG   83 (98)
T ss_dssp             CSSEEEEEEECCSCCCSSCCCEEEEEEEETTCC--CCEESSS-SCBSSSEEEEECCCTTCCEEEEEEEEETTE
T ss_pred             cCCEEEEEEECCCcCCCCCceEEEEEEEecCcc--eeEEeee-ecCceeEEEECCCcCCeEEEEEEEEECCCc
Confidence            444445666555567777899999998876543  2333332 223456789999999999999999988553

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.0045  Score=55.49  Aligned_cols=82  Identities=15%  Similarity=0.103  Sum_probs=55.4

Q ss_pred             CCCCcccccccccccccccCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeE
Q psy5279          34 NENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYS  113 (1310)
Q Consensus        34 ~p~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~  113 (1310)
                      ||+||.. |.+  ..+ +.++..++|--+..++|..+.+|+++......+..  +.... .......+++..+.+...|.
T Consensus         2 Pp~pP~~-p~~--~~~-t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~--~~~~~-~~~~~~~~~i~~L~p~t~Y~   74 (104)
T d1bpva_           2 PIDPPGK-PVP--LNI-TRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRW--LKANF-SNILENEFTVSGLTEDAAYE   74 (104)
T ss_dssp             CCCCCCC-CEE--EEE-ETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCC--EECCC-SCCCSSEEEECSCCSSCCEE
T ss_pred             CCCCCCC-CEE--EEe-cCCEEEEEEEeccccCcceEEEEEEEeecccccce--eEEEe-eccceeEEEEcCCCCCCEEE
Confidence            6888853 333  123 44555567766778888899999999987655532  22221 12234567888999999999


Q ss_pred             EEEeecCcc
Q psy5279         114 YRTYARGRQ  122 (1310)
Q Consensus       114 frt~~~n~~  122 (1310)
                      |||+|.|..
T Consensus        75 frV~A~n~~   83 (104)
T d1bpva_          75 FRVIAKNAA   83 (104)
T ss_dssp             EEEEEECTT
T ss_pred             EEEEEEECC
Confidence            999998744

>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.97  E-value=0.0014  Score=58.81  Aligned_cols=33  Identities=30%  Similarity=0.382  Sum_probs=30.5

Q ss_pred             ccCCCceEEEEEEcccccceeeEEEEEecCCCC
Q psy5279           5 IGRDEGLYSVIARNIASTISHSVTVHVEDNENE   37 (1310)
Q Consensus         5 ~~~d~G~Yt~~~~n~~g~~~~~~s~~v~~~p~p   37 (1310)
                      -.+|+|.|+|+|+|..|++..+++|+|.+.|.|
T Consensus        65 ~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~P   97 (97)
T d1koaa1          65 KGDDKGEYTVRAKNSYGTKEEIVFLNVTRHSEP   97 (97)
T ss_dssp             CSGGGSCEEEEEEETTEEEEEEECCEEECSCCC
T ss_pred             ceecCEEEEEEEEECCCEEEEEEEEEEeecCCC
Confidence            357999999999999999999999999988876

>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ligand binding domain of trkB receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0016  Score=59.40  Aligned_cols=32  Identities=19%  Similarity=0.252  Sum_probs=30.1

Q ss_pred             ccCCCceEEEEEEcccccceeeEEEEEecCCC
Q psy5279           5 IGRDEGLYSVIARNIASTISHSVTVHVEDNEN   36 (1310)
Q Consensus         5 ~~~d~G~Yt~~~~n~~g~~~~~~s~~v~~~p~   36 (1310)
                      -.+|+|.|+|.|+|.+|++++++.|.|.++|+
T Consensus        70 ~~~D~G~Y~C~a~N~~G~~~~~~~v~V~~~P~  101 (103)
T d1wwbx_          70 THMNNGDYTLIAKNEYGKDEKQISAHFMGWPG  101 (103)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEECCSCCCC
T ss_pred             CHHhCceEEEEEeccCCEEEEEEEEEEEeCCC
Confidence            35799999999999999999999999999996

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.65  E-value=0.017  Score=52.54  Aligned_cols=83  Identities=8%  Similarity=-0.037  Sum_probs=52.5

Q ss_pred             cCCCCcccccccccccccccCCCcccccccccccCCcceeEEEEEEeccCCCcee--EEEecccccceeeEEEeeecCCc
Q psy5279          33 DNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYA--AKVMTGKGTISHSVTVHVEDNEN  110 (1310)
Q Consensus        33 ~~p~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~--~k~~~~~~~~S~s~t~~~~~~~~  110 (1310)
                      .+|+||..+ .+  ..+ +.++..+.| ....++|..++||+++.+.......+.  .....   ....++++..+.+..
T Consensus         9 ~pP~~P~~~-~v--~~~-~~~sv~l~W-~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~L~p~t   80 (108)
T d1x4za1           9 SPPEAPDRP-TI--STA-SETSVYVTW-IPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIP---PSRLSVEITGLEKGI   80 (108)
T ss_dssp             CCCCCCCCC-EE--EEC-CSSEEEEEC-CCCCCTTSCCCEEEEEEEESSSCCCCEEEEEEEC---TTCCEEEEESCCTTC
T ss_pred             CCCccCCCC-EE--EEc-cCCEEEEEE-ECCCCCCCccEEEEEEEEecCCCCceEEEEEeec---CCccEEEECCCCCCC
Confidence            366766422 22  122 344444555 788888888999999887654332222  22221   234567888899999


Q ss_pred             eeEEEEeecCccc
Q psy5279         111 EYSYRTYARGRQV  123 (1310)
Q Consensus       111 ~y~frt~~~n~~~  123 (1310)
                      .|.|+|+|.|..+
T Consensus        81 ~Y~frV~A~N~~G   93 (108)
T d1x4za1          81 SYKFRVRALNMLG   93 (108)
T ss_dssp             EEEEEEEEEETTE
T ss_pred             EEEEEEEEECCCc
Confidence            9999999988553

>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Myosin-binding protein C, slow-type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.0041  Score=56.92  Aligned_cols=34  Identities=15%  Similarity=0.061  Sum_probs=30.5

Q ss_pred             cccCCCceEEEEEEcccccceeeEEEEEecCCCC
Q psy5279           4 CIGRDEGLYSVIARNIASTISHSVTVHVEDNENE   37 (1310)
Q Consensus         4 ~~~~d~G~Yt~~~~n~~g~~~~~~s~~v~~~p~p   37 (1310)
                      .-.+|+|.|+|+|+|..|..+++++|.|.++|.+
T Consensus        75 v~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~~~~~  108 (113)
T d2dava1          75 AKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTGT  108 (113)
T ss_dssp             CCTTSCEEEEEEEECSSCEEEECCEEEEECCCCS
T ss_pred             CCHHHCeEEEEEEEeCCCEEEEEEEEEEEcCCCc
Confidence            3468999999999999999999999999988773

>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor TrkA, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: High affinity nerve growth factor receptor TrkA, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.40  E-value=0.003  Score=57.89  Aligned_cols=32  Identities=28%  Similarity=0.309  Sum_probs=30.0

Q ss_pred             cCCCceEEEEEEcccccceeeEEEEEecCCCC
Q psy5279           6 GRDEGLYSVIARNIASTISHSVTVHVEDNENE   37 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~~~~~s~~v~~~p~p   37 (1310)
                      .+|+|.|+|+|.|.+|+++.+++|+|.++|.+
T Consensus        72 ~~D~G~Y~C~A~N~~G~~~~~i~v~v~~~P~~  103 (107)
T d1he7a_          72 HVNNGNYTLLAANPFGQASASIMAAFMDNPFE  103 (107)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEEECCCSCTTS
T ss_pred             HHHCcEEEEEEEeCCCEEEEEEEEEEEcCCCC
Confidence            57999999999999999999999999999963

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.019  Score=51.61  Aligned_cols=85  Identities=14%  Similarity=0.063  Sum_probs=54.3

Q ss_pred             EecCCCCcccccccccccccccCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCc
Q psy5279          31 VEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNEN  110 (1310)
Q Consensus        31 v~~~p~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~  110 (1310)
                      ..|+|+||..+-.+  ..+ +.++..+.|--+.+++|..+.+|+++......+ ..+.....+   ..+++++..+++..
T Consensus         7 ~~~~P~~P~~~~~~--~~~-~~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~-~~~~~~~~~---~~~~~~i~~L~p~t   79 (107)
T d2crma1           7 CPDKPGIPVKPSVK--GKI-HSHSFKITWDPPKDNGGATINKYVVEMAEGSNG-NKWEMIYSG---ATREHLCDRLNPGC   79 (107)
T ss_dssp             CCCCCCCCCCCEEE--EEE-ETTEEEEECCCCTTCCSSCCCEEEEEEEESSSS-CCCEEEECS---SCSEEEECSCCTTS
T ss_pred             CCCCCcCCCCCEEE--eee-cCCEEEEEEEECccCCcceEEEEEEEEEeecCC-CcEEEeecC---CccEEEEeccCCCC
Confidence            45677766433222  112 334444666656677788889999998765443 222222322   34567888999999


Q ss_pred             eeEEEEeecCcc
Q psy5279         111 EYSYRTYARGRQ  122 (1310)
Q Consensus       111 ~y~frt~~~n~~  122 (1310)
                      .|.|+++|.|..
T Consensus        80 ~Y~~rV~A~n~~   91 (107)
T d2crma1          80 FYRLRVYCISDG   91 (107)
T ss_dssp             CEEEEEEEEETT
T ss_pred             EEEEEEEEECCC
Confidence            999999998855

>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C2 set domains
domain: CD4 C2-set domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.91  E-value=0.0062  Score=53.22  Aligned_cols=31  Identities=10%  Similarity=0.167  Sum_probs=28.9

Q ss_pred             cCCCceEEEEEEcccccceeeEEEEEecCCC
Q psy5279           6 GRDEGLYSVIARNIASTISHSVTVHVEDNEN   36 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~~~~~s~~v~~~p~   36 (1310)
                      .+|+|.|+|.|.|..|+.+++++|.|.+.|.
T Consensus        54 ~~DsG~Y~C~a~N~~g~~~~~~~v~V~~~~k   84 (84)
T d2nxyb2          54 LQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK   84 (84)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEEECEECCCC
T ss_pred             cccccEEEEEEEeCCCEEEEEEEEEEEecCC
Confidence            5799999999999999999999999998873

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.64  E-value=0.064  Score=59.31  Aligned_cols=74  Identities=15%  Similarity=0.174  Sum_probs=49.5

Q ss_pred             eceecccCceEEEEEEEcC-------CCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCc-ceEEEEEEeCCeEEEEE
Q psy5279         188 GDELGRGVTGIVYHAVERS-------SGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNL-VRLHDSYETKDSFTIIS  259 (1310)
Q Consensus       188 ~~~LG~GsFG~Vyka~~k~-------Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNI-VkL~d~f~~~~~lyLVm  259 (1310)
                      .+.|+-|--=.+|++....       ..+.|.+++.. .... .....+|..+++.+.--++ .+++.++..    .+||
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~-~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~  120 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPET-ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  120 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCC-HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Ccch-hhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence            4678888889999987643       34566666654 2222 2335689999998853344 578887753    6899


Q ss_pred             ecCCCCch
Q psy5279         260 ELAGGGEL  267 (1310)
Q Consensus       260 Ey~~GGeL  267 (1310)
                      ||++|..+
T Consensus       121 efi~g~~l  128 (395)
T d1nw1a_         121 EYIPSRPL  128 (395)
T ss_dssp             CCCCEEEC
T ss_pred             EEeccccC
Confidence            99987543

>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Type-1 interleukin-1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.52  E-value=0.012  Score=53.56  Aligned_cols=30  Identities=20%  Similarity=0.330  Sum_probs=27.9

Q ss_pred             ccCCCceEEEEEEcccccceeeEEEEEecC
Q psy5279           5 IGRDEGLYSVIARNIASTISHSVTVHVEDN   34 (1310)
Q Consensus         5 ~~~d~G~Yt~~~~n~~g~~~~~~s~~v~~~   34 (1310)
                      -.+|+|.|+++|+|..|+.+.+++|+|.++
T Consensus        67 ~~~D~G~Y~C~a~N~~g~~~~~~~L~V~~~   96 (101)
T d1iray1          67 KVEDSGHYYCVVRNSSYCLRIKISAKFVEN   96 (101)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred             eecCCEEEEEEEECCCCeEEEEEEEEEEeC
Confidence            358999999999999999999999999976

>d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.48  E-value=0.022  Score=50.83  Aligned_cols=70  Identities=10%  Similarity=-0.075  Sum_probs=46.2

Q ss_pred             cCCCcccccccccccCCcceeEEEEEEeccCCC-ceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGR-NYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        52 ~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~-~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      .++....|-.+..++|..++||.++.+...+.. ...+..... .....++++..+.+...|.||++|.|..
T Consensus        15 ~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~frV~A~N~~   85 (101)
T d2haza1          15 SSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKE-ASMEGIVTIVGLKPETTYAVRLAALNGK   85 (101)
T ss_dssp             SSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHH-HHHHSEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeeeec-ccceeEEEecCCCCCeEEEEEEEEEeCC
Confidence            344446666666777878999999988765432 122222211 1234557888899999999999998844

>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1, ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Intercellular adhesion molecule-1, ICAM-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.47  E-value=0.011  Score=52.30  Aligned_cols=29  Identities=31%  Similarity=0.352  Sum_probs=26.7

Q ss_pred             cCCCceEEEEEEcccccceeeEEEEEecC
Q psy5279           6 GRDEGLYSVIARNIASTISHSVTVHVEDN   34 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~~~~~s~~v~~~   34 (1310)
                      .+|+|.|+|+|+|..|+++++++|+|..|
T Consensus        56 ~~d~G~Y~C~A~N~~G~~~~~~~l~V~~P   84 (84)
T d2oz4a3          56 RDLEGTYLCRARSTQGEVTREVTVNVLSP   84 (84)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred             cCCCCEEEEEEEcCCCEEEEEEEEEEECC
Confidence            37999999999999999999999999864

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.38  E-value=0.046  Score=48.80  Aligned_cols=66  Identities=14%  Similarity=-0.016  Sum_probs=46.0

Q ss_pred             cCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        52 ~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      .++..+.|--+..++|+.+++|.++.+....+  .+..+..+   ...++++..+.+...|.|+|+|.|..
T Consensus        16 ~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~--~~~~~~~~---~~~~~~v~~L~p~t~Y~frV~A~N~~   81 (97)
T d2crza1          16 AKEIQLRWGPPLVDGGSPISCYSVEMSPIEKD--EPREVYQG---SEVECTVSSLLPGKTYSFRLRAANKM   81 (97)
T ss_dssp             SSEEEEECCCCSCCTTSCCCEEEEEEECTTSC--CCEEEEEE---SCSEEEEESCCTTCEEEECCEEECSS
T ss_pred             CCEEEEEEeCCCcCCCCceeEEEEEEEcCcCC--ceeEeecC---CceEEEEcCCCCCEEEEEEEEEecCC
Confidence            34444666556677788899999998865433  23333332   34568889999999999999998854

>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Perlecan Ig3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.37  E-value=0.011  Score=51.46  Aligned_cols=28  Identities=25%  Similarity=0.350  Sum_probs=25.8

Q ss_pred             ccCCCceEEEEEEcccccceeeEEEEEe
Q psy5279           5 IGRDEGLYSVIARNIASTISHSVTVHVE   32 (1310)
Q Consensus         5 ~~~d~G~Yt~~~~n~~g~~~~~~s~~v~   32 (1310)
                      -.+|+|.|+|+|+|..|+++.+++|.|+
T Consensus        62 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V~   89 (89)
T d1gl4b_          62 QPSDAGTYVCTGSNMFAMDQGTATLHVQ   89 (89)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred             CcccCEEEEEEEEECCCEEEEEEEEEEC
Confidence            3579999999999999999999999985

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=94.37  E-value=0.042  Score=59.26  Aligned_cols=67  Identities=15%  Similarity=0.208  Sum_probs=44.8

Q ss_pred             eEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCCc-----ceE--EEEEEeCCeEEEEEecCCCC
Q psy5279         197 GIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRNL-----VRL--HDSYETKDSFTIISELAGGG  265 (1310)
Q Consensus       197 G~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPNI-----VkL--~d~f~~~~~lyLVmEy~~GG  265 (1310)
                      -.||++.. .+|+.|++|+-... ....+.+..|...|..|..-.|     +..  -..+...+..+.++++++|.
T Consensus        36 N~vy~v~~-~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~  109 (325)
T d1zyla1          36 NRVYQFQD-EDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGR  109 (325)
T ss_dssp             SEEEEECC-TTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred             ceeEEEEc-CCCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCc
Confidence            47888763 57888999987532 2235667789998888753222     111  12345677889999999874

>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.22  E-value=0.044  Score=48.00  Aligned_cols=67  Identities=18%  Similarity=0.087  Sum_probs=47.3

Q ss_pred             cCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        52 ~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      ....+.-.|..+.++|+.+.||.++.+.....+..... ..+   ...++++..+.+...|.|++.|.|..
T Consensus        13 ~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~~-~~~---~~~~~~i~~L~p~t~Y~~~V~A~N~~   79 (93)
T d2vkwa2          13 DGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIR-LPS---GSDHVMLKSLDWNAEYEVYVVAENQQ   79 (93)
T ss_dssp             TSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEE-ECT---TCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeeee-ccC---CceEEEEeccccceEEEEEEEEEcCC
Confidence            33445556677889999999999999876543222222 222   34568889999999999999998855

>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Kin of IRRE-like protein 3, KIRREL3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.79  E-value=0.0076  Score=54.90  Aligned_cols=30  Identities=17%  Similarity=0.244  Sum_probs=27.1

Q ss_pred             CC-CceEEEEEEcccccceeeEEEEEecCCC
Q psy5279           7 RD-EGLYSVIARNIASTISHSVTVHVEDNEN   36 (1310)
Q Consensus         7 ~d-~G~Yt~~~~n~~g~~~~~~s~~v~~~p~   36 (1310)
                      +| +|.|||+|+|..|+++.++.|.|.+.+.
T Consensus        79 ~D~~G~Y~C~A~N~~G~~~~~~~L~V~~~~~  109 (115)
T d2crya1          79 ADFQTIYNCTAWNSFGSDTEIIRLKEQGSEM  109 (115)
T ss_dssp             HHHHSCEEEEEECSSCEEEEEECCCCSCSSC
T ss_pred             hcCCeEEEEEEEECCCeEEEEEEEEEECCCC
Confidence            45 8999999999999999999999987665

>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=93.63  E-value=0.019  Score=50.58  Aligned_cols=29  Identities=21%  Similarity=0.186  Sum_probs=26.3

Q ss_pred             cccCCCceEEEEEEcccccceeeEEEEEe
Q psy5279           4 CIGRDEGLYSVIARNIASTISHSVTVHVE   32 (1310)
Q Consensus         4 ~~~~d~G~Yt~~~~n~~g~~~~~~s~~v~   32 (1310)
                      .-.+|+|.|||+|+|..|+++.+++|+|+
T Consensus        65 ~~~~D~G~Y~c~a~N~~G~~~~~~~l~V~   93 (93)
T d1wiua_          65 AKRADSGNYKLKVKNELGEDEAIFEVIVQ   93 (93)
T ss_dssp             BCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             ccccccEEEEEEEEECCCEEEEEEEEEEC
Confidence            34679999999999999999999999985

>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=93.33  E-value=0.022  Score=50.19  Aligned_cols=28  Identities=29%  Similarity=0.481  Sum_probs=26.0

Q ss_pred             ccCCCceEEEEEEcccccceeeEEEEEe
Q psy5279           5 IGRDEGLYSVIARNIASTISHSVTVHVE   32 (1310)
Q Consensus         5 ~~~d~G~Yt~~~~n~~g~~~~~~s~~v~   32 (1310)
                      -.+|+|.|+|+|+|..|++++++.|+|+
T Consensus        61 ~~~D~G~Y~C~a~N~~G~~~~~~~l~V~   88 (89)
T d1cs6a4          61 VLEDSGMYQCVAENKHGTVYASAELTVQ   88 (89)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             cccCCEEEEEEEEeCCCEEEEEEEEEEE
Confidence            3579999999999999999999999996

>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Titin
species: Human (Homo sapiens), different modules [TaxId: 9606]

Probab=93.20  E-value=0.028  Score=49.97  Aligned_cols=31  Identities=29%  Similarity=0.260  Sum_probs=27.8

Q ss_pred             cccCCCceEEEEEEcccccceeeEEEEEecC
Q psy5279           4 CIGRDEGLYSVIARNIASTISHSVTVHVEDN   34 (1310)
Q Consensus         4 ~~~~d~G~Yt~~~~n~~g~~~~~~s~~v~~~   34 (1310)
                      .-.+|+|.|+|+|+|..|.++.+++|.|+.+
T Consensus        68 ~~~~D~G~Y~c~a~N~~G~~~~~~~L~V~~k   98 (98)
T d1g1ca_          68 VTGEDSASIMVKAINIAGETSSHAFLLVQAK   98 (98)
T ss_dssp             CCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred             CccccCEEEEEEEEECCcEEEEEEEEEEEEC
Confidence            3457999999999999999999999999864

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.20  E-value=0.1  Score=45.11  Aligned_cols=68  Identities=12%  Similarity=0.042  Sum_probs=46.5

Q ss_pred             ccCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          51 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        51 ~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      +.++..+.|-.+....|..+.+|+++......+..... ...   ...+++++..+.+...|.|++.+.|..
T Consensus        13 ~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~~-~~~---~~~~~~~v~~L~p~t~Y~~rV~A~n~~   80 (96)
T d1x5xa1          13 GITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKP-KYD---GEDLAYTVKNLRRSTKYKFKVIAYNSE   80 (96)
T ss_dssp             CSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEE-EEE---ESCSEEEEESCCSSCEEEEEEEEECSS
T ss_pred             cCCEEEEEEEeecccCcceEeeeEEEeeeccceeeeEE-eec---CCCCEEEECCCCCCCEEEEEEEEEcCC
Confidence            44555566666667778888999998876554432222 221   134567888999999999999997744

>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId: 9103]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Turkey (Meleagris gallopavo) [TaxId: 9103]

Probab=93.16  E-value=0.023  Score=50.83  Aligned_cols=30  Identities=23%  Similarity=0.307  Sum_probs=26.9

Q ss_pred             cccCCCceEEEEEEcccccceeeEEEEEec
Q psy5279           4 CIGRDEGLYSVIARNIASTISHSVTVHVED   33 (1310)
Q Consensus         4 ~~~~d~G~Yt~~~~n~~g~~~~~~s~~v~~   33 (1310)
                      .-.+|+|.|+|+|+|..|++++++.|.|+.
T Consensus        72 ~~~~D~G~Y~C~a~N~~G~~~~~~~L~V~s  101 (102)
T d1fhga_          72 VCGDDDAKYTCKAVNSLGEATCTAELLVET  101 (102)
T ss_dssp             CCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred             CCHHhCEEEEEEEEECCcEEEEEEEEEEEE
Confidence            345799999999999999999999999974

>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=93.05  E-value=0.024  Score=49.87  Aligned_cols=28  Identities=25%  Similarity=0.208  Sum_probs=25.6

Q ss_pred             ccCCCceEEEEEEcccccceeeEEEEEe
Q psy5279           5 IGRDEGLYSVIARNIASTISHSVTVHVE   32 (1310)
Q Consensus         5 ~~~d~G~Yt~~~~n~~g~~~~~~s~~v~   32 (1310)
                      -.+|+|.|+|+|+|..|++..+++|.|.
T Consensus        63 ~~~D~G~Y~C~a~N~~G~~~~~~~l~V~   90 (91)
T d1cs6a3          63 DFEDEGTYECEAENIKGRDTYQGRIIIH   90 (91)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             CccCCEEEEEEEEECCCEEEEEEEEEEE
Confidence            3579999999999999999999999985

>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Titin
species: Human (Homo sapiens), different modules [TaxId: 9606]

Probab=92.96  E-value=0.021  Score=50.21  Aligned_cols=30  Identities=27%  Similarity=0.411  Sum_probs=26.9

Q ss_pred             cccCCCceEEEEEEcccccceeeEEEEEec
Q psy5279           4 CIGRDEGLYSVIARNIASTISHSVTVHVED   33 (1310)
Q Consensus         4 ~~~~d~G~Yt~~~~n~~g~~~~~~s~~v~~   33 (1310)
                      .-.+|+|.|+|+|+|..|+++.+++|+|.+
T Consensus        62 v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~e   91 (91)
T d1tnna_          62 VQASDEGNYSVVVENSEGKQEAEFTLTIQK   91 (91)
T ss_dssp             CCSCCCEEEEEECBCSSCBCCEEEEEECCC
T ss_pred             CCHHHCEEEEEEEEECCCEEEEEEEEEEEC
Confidence            346899999999999999999999999863

>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.95  E-value=0.028  Score=50.03  Aligned_cols=31  Identities=29%  Similarity=0.266  Sum_probs=27.8

Q ss_pred             cccCCCceEEEEEEcccccceeeEEEEEecC
Q psy5279           4 CIGRDEGLYSVIARNIASTISHSVTVHVEDN   34 (1310)
Q Consensus         4 ~~~~d~G~Yt~~~~n~~g~~~~~~s~~v~~~   34 (1310)
                      .-.+|+|.|+|+|+|..|+++.++.|+|.++
T Consensus        70 v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~K  100 (100)
T d1qz1a3          70 VDKNDEAEYVCIAENKAGEQDASIHLKVFAK  100 (100)
T ss_dssp             CCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred             CCcccCEEEEEEEEECCCEEEEEEEEEEEEC
Confidence            3468999999999999999999999999864

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.91  E-value=0.04  Score=49.38  Aligned_cols=69  Identities=13%  Similarity=0.096  Sum_probs=45.4

Q ss_pred             CCCcccccccccccCCcceeEEEEEEeccCCCcee---EEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          53 TKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYA---AKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        53 ~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~---~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      ...+.-.|....++|+.+++|.++......+....   +...... ....++++..+.+...|.|+|.|.|..
T Consensus        24 ~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~L~p~t~Y~frV~A~N~~   95 (111)
T d1wisa1          24 PRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNE-PDARSMEVPDLNPFTCYSFRMRQVNIV   95 (111)
T ss_dssp             SSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESC-TTCSEEEECSCCTTSEECCCCEEECSS
T ss_pred             CCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeeeecc-cceeEEEeCCCCCCCEEEEEEEEEcCC
Confidence            33444455778888999999999887654332221   2222111 234557888889999999999998854

>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=92.63  E-value=0.034  Score=48.82  Aligned_cols=27  Identities=26%  Similarity=0.265  Sum_probs=25.0

Q ss_pred             ccCCCceEEEEEEcccccceeeEEEEE
Q psy5279           5 IGRDEGLYSVIARNIASTISHSVTVHV   31 (1310)
Q Consensus         5 ~~~d~G~Yt~~~~n~~g~~~~~~s~~v   31 (1310)
                      -.+|+|.|+|+|+|..|++..+++|.|
T Consensus        62 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V   88 (89)
T d1biha4          62 KNGDKGYYGCRATNEHGDKYFETLVQV   88 (89)
T ss_dssp             CSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred             ChhhCEEEEEEEEECCCEEEEEEEEEE
Confidence            457999999999999999999999987

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.14  E-value=0.16  Score=45.48  Aligned_cols=71  Identities=10%  Similarity=0.064  Sum_probs=42.6

Q ss_pred             ccCCCcccccccccccCCcceeEEEEEEeccCCCce--eEEEec-------ccccceeeEEEeeecCCceeEEEEeecCc
Q psy5279          51 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNY--AAKVMT-------GKGTISHSVTVHVEDNENEYSYRTYARGR  121 (1310)
Q Consensus        51 ~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~--~~k~~~-------~~~~~S~s~t~~~~~~~~~y~frt~~~n~  121 (1310)
                      +.++..+. |..+.++|+.++||.++.+.......+  ......       .......++++..+++...|.|||.|.|.
T Consensus        12 ~~~sv~l~-W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~N~   90 (107)
T d2ic2a1          12 SDESVMLR-WMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYS   90 (107)
T ss_dssp             C---EEEE-EEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEEEET
T ss_pred             ECCEEEEE-EEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEEEEEEEEEcC
Confidence            33444444 555678888999999988765432221  111110       01112345788899999999999999885


Q ss_pred             c
Q psy5279         122 Q  122 (1310)
Q Consensus       122 ~  122 (1310)
                      .
T Consensus        91 ~   91 (107)
T d2ic2a1          91 N   91 (107)
T ss_dssp             T
T ss_pred             C
Confidence            5

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.92  E-value=0.17  Score=44.97  Aligned_cols=67  Identities=12%  Similarity=0.116  Sum_probs=46.1

Q ss_pred             cCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        52 ~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      ....+.-.|..+.+.|.-++||+++....... ..+.....+   ...++++..+.+...|.|+|+|.|..
T Consensus        23 ~~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~-~~~~~~~~~---~~~~~~~~~L~p~t~Y~frV~A~N~~   89 (105)
T d1x3da1          23 TKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGN-GEFCQCYMG---SQKQFKITKLSPAMGCKFRLSARNDY   89 (105)
T ss_dssp             ETTEEEEECCCCCCCSSCEEEEEEEECTTTSS-SCCEEEEEE---SCSEEEEESCCTTCEEEEECCEEESS
T ss_pred             cCCEEEEEEECCCCCcCccEEEEEEEecCCCc-ceeEEEecC---CccEEEecCCcCCcEEEEEEEEECCC
Confidence            44445556677788888899999988754333 233333322   34567888899999999999987744

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.86  E-value=0.15  Score=45.41  Aligned_cols=84  Identities=12%  Similarity=0.025  Sum_probs=51.0

Q ss_pred             EecCCCCcccccccccccccccCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCc
Q psy5279          31 VEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNEN  110 (1310)
Q Consensus        31 v~~~p~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~  110 (1310)
                      .+|.|+||..--+.   .+ +.++....| ......+.-+.||.++.+....+.........+   ...++++..+.+..
T Consensus         7 ~e~vP~~p~~l~~~---~~-~~~sv~l~W-~~P~~~ng~i~~Y~i~~~~~~~~~~~~~~~~~~---~~~~~~i~~L~p~t   78 (106)
T d1wfna1           7 HEDVPGPVGHLSFS---EI-LDTSLKVSW-QEPGEKNGILTGYRISWEEYNRTNTRVTHYLPN---VTLEYRVTGLTALT   78 (106)
T ss_dssp             SCCSCCCCSCCEEE---SC-CSSEEEEEC-CCCTTCCSCCCEEEEEEEESSCGGGCCCEEECS---SCCEEEEESCCTTC
T ss_pred             CCCCCcCCCCcEEE---Ee-cCCEEEEEE-ECCCCCCCcEEeEEEEEEECCCCcceEEEecCC---CeeEEEEccCCCCC
Confidence            46778766422211   12 333444555 444444445899998887655443333333332   34568899999999


Q ss_pred             eeEEEEeecCcc
Q psy5279         111 EYSYRTYARGRQ  122 (1310)
Q Consensus       111 ~y~frt~~~n~~  122 (1310)
                      .|.|+++|.|..
T Consensus        79 ~Y~~~V~A~n~~   90 (106)
T d1wfna1          79 TYTIEVAAMTSK   90 (106)
T ss_dssp             EEEEEEEEECSS
T ss_pred             EEEEEEEEECCC
Confidence            999999997744

>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Tyrosine-protein kinase receptor tyro3, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.85  E-value=0.035  Score=48.38  Aligned_cols=28  Identities=29%  Similarity=0.258  Sum_probs=25.1

Q ss_pred             cCCCceEEEEEEcccccc-eeeEEEEEec
Q psy5279           6 GRDEGLYSVIARNIASTI-SHSVTVHVED   33 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~-~~~~s~~v~~   33 (1310)
                      .+|+|.|+|+|+|..|+. ++++.|+|++
T Consensus        63 ~~D~G~Y~C~a~N~~G~~~S~~~~l~V~G   91 (91)
T d1rhfa1          63 RSDAGRYWCQVEDGGETEISQPVWLTVEG   91 (91)
T ss_dssp             GGGCEEEEEEESSCTTCEECCCEEEEEEC
T ss_pred             cccCEEEEEEEEECCCCEEEEEEEEEEEC
Confidence            579999999999999985 7899999975

>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: B- and T-lymphocyte attenuator CD272
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.83  E-value=0.036  Score=49.77  Aligned_cols=30  Identities=37%  Similarity=0.424  Sum_probs=26.5

Q ss_pred             ccCCCceEEEEEEcccccc-eeeEEEEEecC
Q psy5279           5 IGRDEGLYSVIARNIASTI-SHSVTVHVEDN   34 (1310)
Q Consensus         5 ~~~d~G~Yt~~~~n~~g~~-~~~~s~~v~~~   34 (1310)
                      -.+|+|.|+++|+|..|+. +|+++|.|.|.
T Consensus        73 ~~~D~G~Y~C~A~N~~G~~~s~~~~l~V~ev  103 (104)
T d2aw2a1          73 LPNDNGSYRCSANFQSNLIESHSTTLYVTDV  103 (104)
T ss_dssp             CGGGCEEEEEEEEETTEEEECCCEEEEEECG
T ss_pred             cHHHCCeEEEEEEcCCCeEEEEEEEEEEEEC
Confidence            4579999999999999986 68999999875

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.36  E-value=0.29  Score=42.45  Aligned_cols=70  Identities=14%  Similarity=0.102  Sum_probs=46.8

Q ss_pred             ccCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          51 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        51 ~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      +.++..+.|-.+....+..+.||.++.+.......+....+..  ....++++..+.+...|.|++.+.|..
T Consensus        19 s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~A~n~~   88 (95)
T d2ibga1          19 SETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEG--AHARSFKIAPLETATMYEFKLQSFSAA   88 (95)
T ss_dssp             SSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEEEC--TTCCEEEECSCCTTCEEEEEEEEECSS
T ss_pred             CCCEEEEEEEeeeeccCCcccccceeEeeeeecceeeeeeccC--CceeEEEEeeccCCeEEEEEEEEEeCC
Confidence            4445556664445666667899999888765443433333322  234567889999999999999998755

>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1 (VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Vascular cell adhesion molecule-1 (VCAM-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.29  E-value=0.057  Score=47.16  Aligned_cols=28  Identities=14%  Similarity=0.114  Sum_probs=25.6

Q ss_pred             ccCCCceEEEEEEcccccceeeEEEEEe
Q psy5279           5 IGRDEGLYSVIARNIASTISHSVTVHVE   32 (1310)
Q Consensus         5 ~~~d~G~Yt~~~~n~~g~~~~~~s~~v~   32 (1310)
                      -.+|+|.|+|+|.|..|+.++++.|.|-
T Consensus        62 ~~~d~G~Y~C~a~N~~g~~~~~~~v~V~   89 (90)
T d1vcaa2          62 SFGNEHSYLCTATCESRKLEKGIQVEIY   89 (90)
T ss_dssp             CGGGCSEEEEEEEETTEEEEEEEEEEEE
T ss_pred             cccccceEEEEEEeCCCEEEEEEEEEEE
Confidence            3579999999999999999999999884

>d1gsma1 b.1.1.4 (A:1-90) Mucosal addressin cell adhesion molecule-1 (MADCAM-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Mucosal addressin cell adhesion molecule-1 (MADCAM-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.27  E-value=0.053  Score=47.96  Aligned_cols=27  Identities=19%  Similarity=0.139  Sum_probs=25.3

Q ss_pred             ccCCCceEEEEEEcccccceeeEEEEE
Q psy5279           5 IGRDEGLYSVIARNIASTISHSVTVHV   31 (1310)
Q Consensus         5 ~~~d~G~Yt~~~~n~~g~~~~~~s~~v   31 (1310)
                      -.+|+|.|+++|.|..|+.++++.|.|
T Consensus        63 ~~~D~G~Y~C~Asn~~g~~~~s~~l~V   89 (90)
T d1gsma1          63 SLSAAGTRVCVGSCGGRTFQHTVQLLV   89 (90)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred             ChhhCCcEEEEEEeCCCcEEEEEEEEE
Confidence            468999999999999999999999987

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.14  E-value=0.14  Score=46.94  Aligned_cols=89  Identities=12%  Similarity=0.010  Sum_probs=57.5

Q ss_pred             EEEEEecCCCCcccccccccccccccCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeee
Q psy5279          27 VTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVE  106 (1310)
Q Consensus        27 ~s~~v~~~p~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~  106 (1310)
                      +...|.|.|+||... .+  ..+  .+..+.-.|....+.+..+.+|.++.++.......+......  .....+++..+
T Consensus         9 ~~~~v~d~P~~P~~~-~v--~~~--~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~L   81 (127)
T d1ueya_           9 TPAPVYDVPNPPFDL-EL--TDQ--LDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--SGTQTTAQLNL   81 (127)
T ss_dssp             CCCCCCCSCCCCEEE-EE--ECC--SSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEE--ESSCCEEEECC
T ss_pred             ccccccccCcCCCCc-EE--EEe--cCCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEeec--CCceEEEECCC
Confidence            445677889887422 12  112  334454456778888888888888887765554444433322  23455677888


Q ss_pred             cCCceeEEEEeecCcc
Q psy5279         107 DNENEYSYRTYARGRQ  122 (1310)
Q Consensus       107 ~~~~~y~frt~~~n~~  122 (1310)
                      .+...|.|++++.|..
T Consensus        82 ~p~t~Y~frV~A~n~~   97 (127)
T d1ueya_          82 SPYVNYSFRVMAVNSI   97 (127)
T ss_dssp             CTTCEECCEEEEEESS
T ss_pred             ccCCEEEEEEEEEcCC
Confidence            8889999999997754

>d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.96  E-value=0.16  Score=45.17  Aligned_cols=71  Identities=11%  Similarity=-0.048  Sum_probs=44.7

Q ss_pred             CCCcccccccccccCCcceeEEEEEEeccCCCce-eE--EEecccccceeeEEEeeecCCceeEEEEeecCccc
Q psy5279          53 TKPITDAYDFGDELGRGVTGIVYHAVERSSGRNY-AA--KVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQV  123 (1310)
Q Consensus        53 ~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~-~~--k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~~  123 (1310)
                      +.++.-+|..+.+.|..+..++++..+....... +.  .........+.++++..+.+...|.||+.|.|..+
T Consensus        19 ~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~t~Y~frV~A~N~~G   92 (107)
T d1cd9b1          19 TNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYMAIWVQAENMLG   92 (107)
T ss_dssp             TTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCEEEEEEEEETTE
T ss_pred             CCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeeeeeccccCccccEEEcCCCCcCceEEEEEEEEeCCc
Confidence            3445556688889888777677776655433222 21  12222223445567778889899999999988553

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.85  E-value=0.24  Score=44.81  Aligned_cols=67  Identities=15%  Similarity=0.015  Sum_probs=43.4

Q ss_pred             cCCCcccccccccccCCcceeEEEEEEeccCCCcee-EEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYA-AKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        52 ~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~-~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      .++....| ......+.-++||.++-+......... .+....   ...++++..+.+...|.|++.|.|..
T Consensus        34 ~~sv~v~W-~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~~~~~~---~~~~~~i~~L~p~t~Y~~~V~A~n~~  101 (117)
T d1wfoa1          34 TTSVRLIW-QPPAAPNGIILAYQITHRLNTTTANTATVEVLAP---SARQYTATGLKPESVYLFRITAQTRK  101 (117)
T ss_dssp             SSEEEEEC-CCCSCCCSCCCEEEEEEEESSCCCSCCCEEEECT---TCCEEEEESCCSSSEEEEEEEEECSS
T ss_pred             CCEEEEEE-ECCCCCCCceEEEeeeeeeccCCCceEeEEecCC---ceEEEEECCCCCCCEEEEEEEEECCC
Confidence            33344555 555555556899988876554433333 333332   34568899999999999999997743

>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Myelin oligodendrocyte glycoprotein (MOG)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.39  E-value=0.079  Score=48.41  Aligned_cols=31  Identities=29%  Similarity=0.281  Sum_probs=28.2

Q ss_pred             cCCCceEEEEEEcccccceeeEEEEEecCCC
Q psy5279           6 GRDEGLYSVIARNIASTISHSVTVHVEDNEN   36 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~~~~~s~~v~~~p~   36 (1310)
                      .+|+|.|+|.|.|..|..+.++.|.|.+|+-
T Consensus        90 ~~D~G~Y~C~v~~~~~~~~~~v~L~V~~P~~  120 (126)
T d1pkoa_          90 FSDEGGYTCFFRDHSYQEEAAVELKVEDPFY  120 (126)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEEEEEECTTT
T ss_pred             hhHCeEEEEEEEECCCEEEEEEEEEEeCCCE
Confidence            5799999999999999999999999998653

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.87  E-value=0.39  Score=50.48  Aligned_cols=137  Identities=12%  Similarity=0.057  Sum_probs=71.7

Q ss_pred             ceecccCceEEEEEEEcCCCcEEEEEEEecCCcchHHHHHHHHHHHHhcCCCC-----cceE---EEEEEeCCeEEEEEe
Q psy5279         189 DELGRGVTGIVYHAVERSSGRNYAAKVMTGKGNQYKSLFKNELDIMNQLCHRN-----LVRL---HDSYETKDSFTIISE  260 (1310)
Q Consensus       189 ~~LG~GsFG~Vyka~~k~Tg~~vAIKiI~~~~~~~~~~~~rEI~IL~~L~HPN-----IVkL---~d~f~~~~~lyLVmE  260 (1310)
                      +.|..|.=-+.|+.... .| .|.+|+.....  ..+.+..|+.+|..|...+     .+..   ..+..-.+....++.
T Consensus        24 ~~i~~G~~N~ny~v~t~-~g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~~~~~~~~~~~~~~   99 (316)
T d2ppqa1          24 KGIAEGVENSNFLLHTT-KD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS   99 (316)
T ss_dssp             EEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred             ecCCCCcccCeEEEEEC-CC-cEEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccceecCCCcceeeecccceeee
Confidence            34556766778887633 34 58999875431  2334566788888775322     2211   012233556677777


Q ss_pred             cCCCCchHH--------------Hhh---h------cCCCCHH------------------HHHHHHHHHHHHHHHhh--
Q psy5279         261 LAGGGELLH--------------SLT---R------QSYYTEY------------------DIAHYIRQLLSGLDYMH--  297 (1310)
Q Consensus       261 y~~GGeL~~--------------~l~---~------~~~lsE~------------------~i~~ii~QIl~GL~YLH--  297 (1310)
                      ++.|.....              .+.   .      .......                  .....+..+...+.-.+  
T Consensus       100 ~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  179 (316)
T d2ppqa1         100 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK  179 (316)
T ss_dssp             CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred             ecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcchhHHHHHHHHHHhhhccCcc
Confidence            777642210              000   0      0001110                  11222222333333333  


Q ss_pred             --hCCeeecCCCCCCEEeecCCCCeEEEEeecccee
Q psy5279         298 --RLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  331 (1310)
Q Consensus       298 --s~gIVHRDLKPeNILL~~~~~~~VKLsDFGLAr~  331 (1310)
                        ..|+||.|+.++|||++.+.  ..-|.||+.|..
T Consensus       180 ~L~~giIHgDl~~dNvl~~~~~--v~gvIDF~~~~~  213 (316)
T d2ppqa1         180 DLPAGVIHADLFQDNVFFLGDE--LSGLIDFYFACN  213 (316)
T ss_dssp             SSCEEEECSCCCGGGEEEETTE--EEEECCCTTCEE
T ss_pred             ccccccccCCcchhhhhccccc--ceeEeccccccc
Confidence              35899999999999998543  446999999864

>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.86  E-value=0.077  Score=46.74  Aligned_cols=31  Identities=23%  Similarity=0.247  Sum_probs=27.4

Q ss_pred             cCCCceEEEEEEcccccc-eeeEEEEEecCCC
Q psy5279           6 GRDEGLYSVIARNIASTI-SHSVTVHVEDNEN   36 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~-~~~~s~~v~~~p~   36 (1310)
                      .+|+|.|+|+|+|..|+. +.+++|+|..+|.
T Consensus        65 ~~d~G~Y~C~a~N~~g~~~S~~~~L~V~~~Ps   96 (96)
T d1l6za2          65 REDAGEYQCEISNPVSVRRSNSIKLDIIFDPS   96 (96)
T ss_dssp             GGGCEEEEEEEESSSCCEECCCCEEEECCSCC
T ss_pred             hhhceEEEEEEEeCCCCeEEEeEEEEEEcCCC
Confidence            479999999999999987 5789999988773

>d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.82  E-value=0.48  Score=41.88  Aligned_cols=69  Identities=4%  Similarity=-0.218  Sum_probs=40.8

Q ss_pred             cCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        52 ~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      ....+.-.|......+..+.+|.+..+..... ..+..+.... ...+++++..+.+...|.|++++.+..
T Consensus        19 ~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~-~~~~~~~~~~-~~~~~~~i~~L~p~t~Y~frVra~n~~   87 (105)
T d2d9qb2          19 QAGCLQLSWEPWQPGLHINQKCELRHKPQRGE-ASWALVGPLP-LEALQYELCGLLPATAYTLQIRCIRWP   87 (105)
T ss_dssp             CCSCEEEEEECCGGGTTSCEEEEEEEEESSSC-CCCEEEEEEC-SCEEEEEECSCCSCCCEEEEEEEEECS
T ss_pred             CCCeEEEEEcCCCCCCceeEEEEEEEEecCCc-cceeeeeccc-CCcceeEEecccCCeEEEEEEEEEeCC
Confidence            34444444555655565677777766544322 2222221111 134567888899999999999997744

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.81  E-value=0.61  Score=41.26  Aligned_cols=66  Identities=5%  Similarity=-0.098  Sum_probs=42.5

Q ss_pred             CCccccccc--ccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          54 KPITDAYDF--GDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        54 ~~~~~~~~~--~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      +....| ..  ....++-+.||.+..+....+..+....+..  ...+++++..+.+...|.|+|.|.|..
T Consensus        20 si~v~W-~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~A~N~~   87 (105)
T d1cfba2          20 NLVISW-TPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFD--WRQNNIVIADQPTFVKYLIKVVAINDR   87 (105)
T ss_dssp             CEEEEC-CCCCGGGTCSSSCEEEEEEEESSTTCCCEEEEECC--TTCCEEEECSCCSSCEEEEEEEEEETT
T ss_pred             eEEEEE-eCCChhhcCceEEEEEEEeeeeccccceeEEEecC--CCccEEEECCCCCCCEEEEEEEEEeCC
Confidence            334455 43  2344446789998887665544433333322  234667888899999999999998855

>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Junction adhesion molecule, JAM, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.68  E-value=0.068  Score=47.98  Aligned_cols=29  Identities=21%  Similarity=0.153  Sum_probs=23.8

Q ss_pred             cCCCceEEEEEEccccccee--eEEEEEecC
Q psy5279           6 GRDEGLYSVIARNIASTISH--SVTVHVEDN   34 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~~~--~~s~~v~~~   34 (1310)
                      .+|+|.|+|+|+|.+|+++.  ++.|.|.+.
T Consensus        76 ~~D~G~Y~C~a~N~~G~~~~s~~v~l~V~~l  106 (110)
T d1f97a2          76 AFDSGEYYCQAQNGYGTAMRSEAAHMDAVEL  106 (110)
T ss_dssp             GGGCEEEEEEEECSSSCCEECCCEEEEEESS
T ss_pred             ccCCEEEEEEEEECCCcEEEEEEEEEEEEec
Confidence            47999999999999998865  566667665

>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Receptor-type tyrosine-protein phosphatase mu
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.60  E-value=0.11  Score=45.62  Aligned_cols=30  Identities=23%  Similarity=0.313  Sum_probs=24.7

Q ss_pred             CcccCCCceEEEEEEcccccc-eeeEEEEEe
Q psy5279           3 DCIGRDEGLYSVIARNIASTI-SHSVTVHVE   32 (1310)
Q Consensus         3 ~~~~~d~G~Yt~~~~n~~g~~-~~~~s~~v~   32 (1310)
                      +.-.+|+|.|||+|.|..|++ +.++.|+|.
T Consensus        66 ~v~~~D~G~Y~C~a~N~~G~~~s~~a~L~Vk   96 (96)
T d2c9aa1          66 NTTKRDAGKYRCMIRTEGGVGISNYAELVVK   96 (96)
T ss_dssp             SCCGGGCSEEEEEEEETTEEEEEEEEEEEEC
T ss_pred             CCCHHHCeEEEEEEEeCCCeEEEEEEEEEEC
Confidence            344689999999999999996 555899883

>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: IgE high affinity receptor alpha subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.35  E-value=0.093  Score=46.07  Aligned_cols=30  Identities=17%  Similarity=0.194  Sum_probs=27.0

Q ss_pred             cCCCceEEEEEEcccccc-eeeEEEEEecCC
Q psy5279           6 GRDEGLYSVIARNIASTI-SHSVTVHVEDNE   35 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~-~~~~s~~v~~~p   35 (1310)
                      .+|+|.|+|.|.|..|+. +..++|+|.++|
T Consensus        58 ~~dsG~Y~C~a~n~~~~~~S~~v~i~V~~~P   88 (89)
T d1f2qa2          58 VEDSGTYYCTGKVWQLDYESEPLNITVIKAP   88 (89)
T ss_dssp             GGGCEEEEEEEEETTEEEECCCEEEEEECSC
T ss_pred             eecCcEEEEEEEeCCCCeEeeeEEEEEEeCC
Confidence            579999999999999885 688999999988

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.28  E-value=0.39  Score=42.03  Aligned_cols=84  Identities=13%  Similarity=0.065  Sum_probs=48.8

Q ss_pred             cCCCCcccccccccccccccCCCcccccccccccCCcceeEEEEEEeccC---CCceeEEEecccccceeeEEEeeecCC
Q psy5279          33 DNENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSS---GRNYAAKVMTGKGTISHSVTVHVEDNE  109 (1310)
Q Consensus        33 ~~p~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~---g~~~~~k~~~~~~~~S~s~t~~~~~~~  109 (1310)
                      |+|+||..--+.   .+ +.++.... |+...+.++-++||.++......   ....+....... ....++++..+.+.
T Consensus         1 d~P~~P~~~~~~---~~-~~~sv~v~-W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~L~p~   74 (103)
T d1qg3a2           1 EVPSEPGRLAFN---VV-SSTVTQLS-WAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDN-PKNRMLLIENLRES   74 (103)
T ss_dssp             CCCCCCCCCEEE---EE-ETTEEEEE-CCCCSCCSSCCCEEEEEEEEBCTTSCBCSCCEEEEECC-TTCCEEEECCCCTT
T ss_pred             CcCccCCCcEEE---Ee-cCCEEEEE-EEECccCCCCceEEEEEeeccccccccccceEEEEecC-CCceEEEEeecCCC
Confidence            578766422111   22 33344444 45566666678999888765432   111122222111 23456788889999


Q ss_pred             ceeEEEEeecCcc
Q psy5279         110 NEYSYRTYARGRQ  122 (1310)
Q Consensus       110 ~~y~frt~~~n~~  122 (1310)
                      ..|.|++.|.|..
T Consensus        75 t~Y~~~V~A~n~~   87 (103)
T d1qg3a2          75 QPYRYTVKARNGA   87 (103)
T ss_dssp             CCEEEEEEEEETT
T ss_pred             CEEEEEEEEEcCC
Confidence            9999999998754

>d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1355
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.05  E-value=0.2  Score=44.92  Aligned_cols=68  Identities=13%  Similarity=0.128  Sum_probs=46.1

Q ss_pred             CCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCccc
Q psy5279          53 TKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQV  123 (1310)
Q Consensus        53 ~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~~  123 (1310)
                      ...+.-.|+...+.+..+.||+++.+.....+......+.   ...+.+++..+.+...|.|+|++.|...
T Consensus        20 ~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~rV~A~n~~g   87 (108)
T d1v5ja_          20 PRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEVLDPAVA---GTETELLVPGLIKDVLYEFRLVAFAGSF   87 (108)
T ss_dssp             SSSEEEEEECCSCCSSCCCBEEEEEEETTCCCEEEEEEEC---SSCCEEECCCCCTTSCEECCBEEEETTE
T ss_pred             CCEEEEEEEecccCCCceeEEEEEeeeeeeeeeecccccc---ceeeeEEEEeccCCcEEEEEEEEEeCCC
Confidence            3445555676666676789999998865444333333332   2346678888999999999999988553

>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Junction adhesion molecule, JAM, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.88  E-value=0.052  Score=48.16  Aligned_cols=27  Identities=41%  Similarity=0.354  Sum_probs=23.5

Q ss_pred             cCCCceEEEEEEcccccceeeEEEEEe
Q psy5279           6 GRDEGLYSVIARNIASTISHSVTVHVE   32 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~~~~~s~~v~   32 (1310)
                      .+|+|.|+|+|+|.+|++..+++|+|.
T Consensus        75 ~~D~G~Y~C~a~N~~G~~~~s~~v~v~  101 (104)
T d1nbqa2          75 ASDTGEYSCEARNGYGTPMTSNAVRME  101 (104)
T ss_dssp             GGGCCCEEEEEECSSSCCEECCCBCCE
T ss_pred             cccCcEEEEEEEECCCceEEEEEEEEE
Confidence            579999999999999999887777664

>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Type-1 interleukin-1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.59  E-value=0.15  Score=46.23  Aligned_cols=35  Identities=9%  Similarity=0.073  Sum_probs=24.9

Q ss_pred             CcccCCCceEEEEEEccccccee----eEEEEEecCCCC
Q psy5279           3 DCIGRDEGLYSVIARNIASTISH----SVTVHVEDNENE   37 (1310)
Q Consensus         3 ~~~~~d~G~Yt~~~~n~~g~~~~----~~s~~v~~~p~p   37 (1310)
                      +.-.+|+|.|||.|+|..|..+.    +++|.|++.+.|
T Consensus        64 ~v~~~D~G~Y~C~a~n~~~g~~~~vt~~i~~~v~~~~~P  102 (103)
T d1iray2          64 NVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKP  102 (103)
T ss_dssp             SCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCC
T ss_pred             ccccccCcEEEEEEEECcCCEEEEEEEEEEEEECCCCCC
Confidence            34568999999999999987654    444555555443

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.19  E-value=0.75  Score=40.38  Aligned_cols=62  Identities=19%  Similarity=0.238  Sum_probs=41.3

Q ss_pred             CcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          55 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        55 ~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      .+.-.|......++-+.||.++.+..+.+..   ..+.   ....++++..+.+...|.|++.+.|..
T Consensus        26 si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~---~~~~---~~~~~~~i~~L~p~t~Y~~~V~A~n~~   87 (103)
T d1x5ga1          26 SITVTWETPVSGNGEIQNYKLYYMEKGTDKE---QDVD---VSSHSYTINGLKKYTEYSFRVVAYNKH   87 (103)
T ss_dssp             EEEEECCCCSCCSSCCSEEEEEEEETTCCCC---CCEE---ECSSEEEECSCCTTCEEEEEEEEECSS
T ss_pred             EEEEEEECCcCCCccEEEEEEEEEeCCCcee---EEEe---ccccEEecCCCCCCCEEEEEEEEEcCC
Confidence            3433445555556668999888887654422   1221   234567888999999999999998754

>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor tyro3, second domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Tyrosine-protein kinase receptor tyro3, second domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.01  E-value=0.13  Score=44.93  Aligned_cols=27  Identities=26%  Similarity=0.386  Sum_probs=22.7

Q ss_pred             cCCCceEEEEEEcccccc-eeeEEEEEe
Q psy5279           6 GRDEGLYSVIARNIASTI-SHSVTVHVE   32 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~-~~~~s~~v~   32 (1310)
                      .+|+|.|+|+|+|.+|+. +.+++|+|.
T Consensus        58 ~~d~G~Y~C~A~N~~G~~~S~~~~v~Vk   85 (85)
T d1rhfa2          58 VTQSTMFSCEAHNLKGLASSRTATVHLQ   85 (85)
T ss_dssp             CSSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred             ccccEEEEEEEEcCCCcEEEEEEEEEEC
Confidence            369999999999999965 668888873

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.99  E-value=0.41  Score=43.39  Aligned_cols=69  Identities=12%  Similarity=-0.046  Sum_probs=43.1

Q ss_pred             ccCCCcccccccccccCCcceeEEEEEEe-ccCC-CceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          51 TRTKPITDAYDFGDELGRGVTGIVYHAVE-RSSG-RNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        51 ~~~~~~~~~~~~~~~~G~g~~G~v~~~~~-~~~g-~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      +.++..+.|--+..+.|..+.||+++.+- ...+ ...+..+..+   ..+++++..+.+...|.|+++|.|..
T Consensus        28 t~~sv~l~W~~P~~~~g~~i~~y~i~y~~~~~~~~~~~~~~~~~~---~~~~~~v~~L~p~t~Y~frV~A~n~~   98 (120)
T d1wfua_          28 THHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTG---YATRHVVEGLEPRTLYKFRLKVTSPS   98 (120)
T ss_dssp             ETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEEE---SCSEEEEESCCTTCEEEEEEEEECSS
T ss_pred             cCCEEEEEEECCcccCcccccceeeeeeeecccccccceeeeccc---cccEEeCCCCCCCcEeeEEEEEEeCC
Confidence            44444555655556677778898765532 2222 2223333332   24567889999999999999998744

>d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.91  E-value=0.73  Score=40.91  Aligned_cols=69  Identities=4%  Similarity=-0.079  Sum_probs=43.2

Q ss_pred             ccCCCcccccccccccCCcceeEEEEEEeccCCCcee-EEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          51 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYA-AKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        51 ~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~-~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      .....+.-.|......+..+.+|-++-+....+.++. +....   ...+++++..+.+...|.|++++.+..
T Consensus        19 ~~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~~~~---~~~~~~~l~~L~p~t~Y~frVra~~~~   88 (106)
T d1cd9b2          19 HQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLP---SSKDQFELCGLHQAPVYTLQMRCIRSS   88 (106)
T ss_dssp             -CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEEE---SCEEEEEECCCCSCSCEEEEEEEEESS
T ss_pred             CCCCEEEEEEcCcccCCccceEEEEEEeeccccccceeeeccc---CCceEEEEeccCCCeEEEEEEEEEeCC
Confidence            3444554455656666667788888776544332222 22222   235667888999999999999987744

>d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.71  E-value=0.82  Score=39.36  Aligned_cols=64  Identities=11%  Similarity=0.013  Sum_probs=41.3

Q ss_pred             CCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          54 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        54 ~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      ..+.-.|+...  |..+.||.++..............+.   ...+++++..+.+...|.|++++.+..
T Consensus        20 ~si~l~W~~p~--~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~t~~~i~~L~p~t~Y~~~V~a~~~~   83 (95)
T d2fnba_          20 SSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIFEDFVD---SSVGYYTVTGLEPGIDYDISVITLING   83 (95)
T ss_dssp             SCEEEECCCCC--CSSCCEEEEEEEEETSCCEEEEEECC---SSCSEEEECCCCTTSEEEEEEEEEETT
T ss_pred             CEEEEEEEecC--CceEEeEEEEEEEeeccceEEEEEeC---CCCeEEEEecccCCEEEEEEEEEEeCC
Confidence            33433455443  44679999998876543222222222   234678999999999999999887744

>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.49  E-value=0.77  Score=39.44  Aligned_cols=77  Identities=12%  Similarity=-0.001  Sum_probs=47.6

Q ss_pred             CCCcccccccccccccccCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEE
Q psy5279          35 ENEYSYRTYARGRQVKTRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSY  114 (1310)
Q Consensus        35 p~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~f  114 (1310)
                      |+||..+.+.   .+ +.++..+. |+...+.|+.++||.++.......  ++. ...+   ..+++++..+.+...|.|
T Consensus         1 P~~P~~~~v~---~~-s~~si~l~-W~~p~~~~~~i~~Y~v~~~~~~~~--~~~-~~~~---~~~~~~i~~L~p~t~Y~~   69 (93)
T d1x4xa1           1 PDQCKPPQVT---CR-SATCAQVN-WEVPLSNGTDVTEYRLEWGGVEGS--MQI-CYCG---PGLSYEIKGLSPATTYYC   69 (93)
T ss_dssp             CCCCCCCCCE---EE-ETTEEEEE-CCCCSCSSSCCCEEEEEEESSTTS--CCE-EEEE---SCSEEEEESCCSSCEEEE
T ss_pred             CcCCCCCEEE---Ee-CCCeEEEE-EEecccCCCeeEEEEEEEccCCCc--ceE-eecC---CccEEEEcccceeeEEEE
Confidence            6666433322   12 33444444 555666677789999988764433  222 2222   245578889999999999


Q ss_pred             EEeecCcc
Q psy5279         115 RTYARGRQ  122 (1310)
Q Consensus       115 rt~~~n~~  122 (1310)
                      ++++.|..
T Consensus        70 ~V~A~n~~   77 (93)
T d1x4xa1          70 RVQALSVV   77 (93)
T ss_dssp             EEEEECSS
T ss_pred             EEEEEECC
Confidence            99997744

>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Junction adhesion molecule, JAM, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.14  E-value=0.19  Score=44.35  Aligned_cols=27  Identities=19%  Similarity=0.393  Sum_probs=23.1

Q ss_pred             cCCCceEEEEEEcccccceeeEEEEEe
Q psy5279           6 GRDEGLYSVIARNIASTISHSVTVHVE   32 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~~~~~s~~v~   32 (1310)
                      .+|+|.|+|+|+|..|+...+++|.|+
T Consensus        74 ~~D~G~Y~C~a~n~~g~~~~~~~v~v~  100 (102)
T d1f97a1          74 RKDNGEYTCMVSEEGGQNYGEVSIHLT  100 (102)
T ss_dssp             GGGCEEEEEEEEETTSSSEEEEEEEEE
T ss_pred             ccCCEEEEEEEEECCCCEEEEEEEEEE
Confidence            579999999999999998877776653

>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.76  E-value=0.2  Score=43.82  Aligned_cols=28  Identities=25%  Similarity=0.223  Sum_probs=24.9

Q ss_pred             ccCCCceEEEEEEcccccceeeEEEEEe
Q psy5279           5 IGRDEGLYSVIARNIASTISHSVTVHVE   32 (1310)
Q Consensus         5 ~~~d~G~Yt~~~~n~~g~~~~~~s~~v~   32 (1310)
                      -.+|+|.|+|+|+|.+|.....++|.|+
T Consensus        64 ~~~D~G~Y~C~a~n~~~~~~~~~~i~Vi   91 (92)
T d1epfa2          64 KKTDEGTYRCEGRILARGEINFKDIQVI   91 (92)
T ss_dssp             CGGGCEEEEEEEEEGGGTEEEEEEEEEE
T ss_pred             CHHhCEEEEEEEEECcCCEEEEEEEEEE
Confidence            3579999999999999999888888885

>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32) {Human (Homo sapiens), IIb [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fc gamma receptor ectodomain (CD32)
species: Human (Homo sapiens), IIb [TaxId: 9606]

Probab=86.46  E-value=0.16  Score=44.40  Aligned_cols=29  Identities=21%  Similarity=0.177  Sum_probs=25.1

Q ss_pred             cCCCceEEEEEEcccccc-eeeEEEEEecC
Q psy5279           6 GRDEGLYSVIARNIASTI-SHSVTVHVEDN   34 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~-~~~~s~~v~~~   34 (1310)
                      .+|+|.|+|.|+|..|+. +.+++|+|.+|
T Consensus        58 ~~dsG~Y~C~a~n~~g~~~S~~v~l~V~~P   87 (88)
T d2fcba2          58 HSHSGDYHCTGNIGYTLYSSKPVTITVQAP   87 (88)
T ss_dssp             GGGCEEEEEEEEETTEEEECCCEEEEECCC
T ss_pred             HHHCCeEEEEEEeCCCCEEeeeEEEEEeCC
Confidence            579999999999999986 57899999764

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.43  E-value=0.37  Score=43.05  Aligned_cols=69  Identities=9%  Similarity=-0.026  Sum_probs=45.0

Q ss_pred             ccCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          51 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        51 ~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      +.++...+|--+..+.++.+.||.++.+.........+....   ...+++++..+.+...|.|++.+.|..
T Consensus        23 ~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~p~t~Y~~rV~A~n~~   91 (107)
T d1x5fa1          23 STRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSH---PGEMQVTIQNLMPATVYIFRVMAQNKH   91 (107)
T ss_dssp             CSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEECSS---TTCSEEEECSCCTTCEEEEEEEEECSS
T ss_pred             cCCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEEEeC---CCccEEEecCCCCCCEEEEEEEEEeCC
Confidence            333444555444456677788988887765444333333332   235668889999999999999998744

>d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.20  E-value=0.64  Score=41.37  Aligned_cols=84  Identities=8%  Similarity=-0.073  Sum_probs=47.3

Q ss_pred             CCCCcccccccccccccccCCCc-ccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCcee
Q psy5279          34 NENEYSYRTYARGRQVKTRTKPI-TDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEY  112 (1310)
Q Consensus        34 ~p~pp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y  112 (1310)
                      +|+||....+.   .......++ ..| ....+.++-+.||.++.+............... ....+++++..+.+...|
T Consensus         4 kP~pP~~~~v~---~~~~~~~si~v~W-~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~~~t~Y   78 (115)
T d1bqua2           4 KPNPPHNLSVI---NSEELSSILKLTW-TNPSIKSVIILKYNIQYRTKDASTWSQIPPEDT-ASTRSSFTVQDLKPFTEY   78 (115)
T ss_dssp             ECCCCEEEEEE---CC--CCSCEEEEE-ECCGGGGTSCEEEEEEEEETTCSSCEECCGGGG-CSCCSEEEECSCCSSEEE
T ss_pred             ECCCCCCCEEE---EeccCCCEEEEEE-eeccccccceeeeeeeeeeeeeeeeeccccccc-cccccEEeeCCCccCcEE
Confidence            47777532221   121223333 445 445555666789999888654432211111111 122456788889999999


Q ss_pred             EEEEeecCcc
Q psy5279         113 SYRTYARGRQ  122 (1310)
Q Consensus       113 ~frt~~~n~~  122 (1310)
                      .|+|++.+..
T Consensus        79 ~~~V~a~~~~   88 (115)
T d1bqua2          79 VFRIRCMKED   88 (115)
T ss_dssp             EEEEEEEETT
T ss_pred             EEEEEEEeCC
Confidence            9999887744

>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Semaphorin 4d Ig-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.95  E-value=0.21  Score=44.01  Aligned_cols=27  Identities=15%  Similarity=0.190  Sum_probs=23.3

Q ss_pred             ccCCCceEEEEEEcccccceeeEEEEE
Q psy5279           5 IGRDEGLYSVIARNIASTISHSVTVHV   31 (1310)
Q Consensus         5 ~~~d~G~Yt~~~~n~~g~~~~~~s~~v   31 (1310)
                      -.+|+|.|+|+|+|+.|.+.++.+|.+
T Consensus        58 ~~~DsG~Y~C~A~n~~g~~~~~~~l~~   84 (92)
T d1olza1          58 SEGDSGVYQCLSEERVKNKTVFQVVAK   84 (92)
T ss_dssp             CGGGCEEEEEEEEEECSSSEEEEEEEE
T ss_pred             CHHHCcEEEEEEEEcCCCEEEEEEEEE
Confidence            457999999999999999988777764

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=85.95  E-value=0.2  Score=52.90  Aligned_cols=32  Identities=16%  Similarity=0.116  Sum_probs=26.3

Q ss_pred             ccCCceecCCCCCCeEeccCCCCcEEEecccccc
Q psy5279         497 HRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  530 (1310)
Q Consensus       497 H~~~i~hrDlkp~Nil~~~~~~~~ikl~DfG~a~  530 (1310)
                      -..||||.||.|+|||++.+.  ..=|.|||.|.
T Consensus       181 L~~giIHgDl~~dNvl~~~~~--v~gvIDF~~~~  212 (316)
T d2ppqa1         181 LPAGVIHADLFQDNVFFLGDE--LSGLIDFYFAC  212 (316)
T ss_dssp             SCEEEECSCCCGGGEEEETTE--EEEECCCTTCE
T ss_pred             cccccccCCcchhhhhccccc--ceeEecccccc
Confidence            358999999999999997532  45799999884

>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.92  E-value=0.22  Score=43.78  Aligned_cols=28  Identities=21%  Similarity=0.277  Sum_probs=23.6

Q ss_pred             ccCCCceEEEEEEcccccc-eeeEEEEEe
Q psy5279           5 IGRDEGLYSVIARNIASTI-SHSVTVHVE   32 (1310)
Q Consensus         5 ~~~d~G~Yt~~~~n~~g~~-~~~~s~~v~   32 (1310)
                      -.+|+|.|+|+|+|..|.. +++++|.|-
T Consensus        68 ~~~D~G~Y~C~a~N~~G~~~~~tv~l~V~   96 (97)
T d1epfa1          68 NIDDAGIYKCVVTAEDGTQSEATVNVKIF   96 (97)
T ss_dssp             CGGGCEEEEEEEEETTTEEEEEEEEEEEE
T ss_pred             chhhceEEEEEEEeCCCcEEEEEEEEEEE
Confidence            3579999999999999975 578888874

>d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Contactin 3 (KIAA1496)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.35  E-value=0.61  Score=42.08  Aligned_cols=92  Identities=18%  Similarity=0.056  Sum_probs=51.9

Q ss_pred             ceeeEEEEEecCCCCcccccccccccccccCCCccccccc-ccccCCcceeEEEEEEeccCCCceeEEEecccccceeeE
Q psy5279          23 ISHSVTVHVEDNENEYSYRTYARGRQVKTRTKPITDAYDF-GDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSV  101 (1310)
Q Consensus        23 ~~~~~s~~v~~~p~pp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~  101 (1310)
                      -..|.+++|.-.++||+.+|......+ +.......|-.. ....+..++||.++.+.....   .++....    ...+
T Consensus         3 s~~S~~v~v~T~~~~P~~pp~~~~~~~-~~~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~~---~~~~~~~----~~~~   74 (117)
T d1wj3a_           3 SGSSGTVNVTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQN---NVQVLNT----NKTS   74 (117)
T ss_dssp             CCCCCCCCCCCSCCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCS---SCEEEEE----SSSE
T ss_pred             CCCCCCEEEEcCCCCcCCCCcceEEee-cCCEEEEEEeecccccCCCceeEEEEEEEecCCC---ceeeeec----eeeE
Confidence            344555666666666665554421112 223333444322 344555789998887754322   2333321    2334


Q ss_pred             EEeeecCCceeEEEEeecCcc
Q psy5279         102 TVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus       102 t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      ++..+++...|.|+|+|.|..
T Consensus        75 ~~~~L~p~t~Y~~~V~A~n~~   95 (117)
T d1wj3a_          75 AELVLPIKEDYIIEVKATTDG   95 (117)
T ss_dssp             EEEECCCSSCEEEEEEEEESS
T ss_pred             EEeeccCCcEEEEEEEEEcCC
Confidence            566788889999999998844

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.02  E-value=1.1  Score=38.22  Aligned_cols=67  Identities=9%  Similarity=0.041  Sum_probs=42.8

Q ss_pred             cCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        52 ~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      ....+.-.|......++-+.||.++......+..... ...   .....+++..+.+...|.|+++|.|..
T Consensus        13 t~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-~~~---~~~~~~~i~~L~p~t~Y~~~V~A~n~~   79 (95)
T d2djsa1          13 TMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSS-MAR---SQTNTARIDGLRPGMVYVVQVRARTVA   79 (95)
T ss_dssp             CSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCE-EEE---ESSSEEEEESCCTTCEEEEEEEEEESS
T ss_pred             cCCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeE-eec---CCccEEEEeecCCccEEEEEEEEEcCC
Confidence            3334444445455555578899888876654322222 221   134567889999999999999997744

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=84.76  E-value=0.29  Score=52.41  Aligned_cols=28  Identities=21%  Similarity=0.320  Sum_probs=23.3

Q ss_pred             CCceecCCCCCCeEeccCCCCcEEEecccccc
Q psy5279         499 LSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSR  530 (1310)
Q Consensus       499 ~~i~hrDlkp~Nil~~~~~~~~ikl~DfG~a~  530 (1310)
                      .++||.|+.|+|||+++  +  ..+.||+.|.
T Consensus       192 ~~liHgDlh~~NvL~~~--~--~~~IDFdd~~  219 (325)
T d1zyla1         192 VLRLHGDCHAGNILWRD--G--PMFVDLDDAR  219 (325)
T ss_dssp             CEECCSSCSGGGEEESS--S--EEECCCTTCC
T ss_pred             ceeecCCCCcccEEEeC--C--ceEEechhcc
Confidence            68999999999999963  2  3489999885

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.51  E-value=1.1  Score=38.38  Aligned_cols=64  Identities=16%  Similarity=0.159  Sum_probs=42.3

Q ss_pred             CCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          54 KPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        54 ~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      +.... |....+.|..+.||.++.+....+..... ....   ...++++..+.+...|.|++.|.|..
T Consensus        15 sv~l~-W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~-~~~~---~~~~~~i~~L~p~t~Y~~~V~A~n~~   78 (94)
T d2dn7a1          15 TALLQ-WHPPKELPGELLGYRLQYCRADEARPNTI-DFGK---DDQHFTVTGLHKGTTYIFRLAAKNRA   78 (94)
T ss_dssp             EEEEE-EECCSSCSSCCCEEEEEEEETTCSSCEEE-EEET---TCCEEEEECCCTTCEEEEEEEEEETT
T ss_pred             EEEEE-EeCCCCCCCceEEEEEEEEEcCCCCcEEE-EcCC---CccEEEEEccCCeeEEEEEEEEEcCC
Confidence            33344 45555666678999999886654422222 2221   34567888999999999999987744

>d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Erythropoietin (EPO) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.44  E-value=0.91  Score=39.88  Aligned_cols=63  Identities=5%  Similarity=-0.084  Sum_probs=42.0

Q ss_pred             CcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecC
Q psy5279          55 PITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARG  120 (1310)
Q Consensus        55 ~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n  120 (1310)
                      ....|..+....+...++|.++.+...............   ..+++++..+.+...|.|+|+++.
T Consensus        22 l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~---~~t~~~i~~L~p~t~Y~~rVRar~   84 (105)
T d1erna2          22 VVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQRVEILE---GRTECVLSNLRGRTRYTFAVRARM   84 (105)
T ss_dssp             EEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEEEEEECT---TCCEEEECSCCSSCEEEEEEEEEE
T ss_pred             EEEEeeeccccccceEEEEEEEEecCCCCCceEEEeecC---CccEEEEeCCCCCcEEEEEEEEEE
Confidence            445666555667778888988887664433333222222   245678888999999999998865

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.11  E-value=0.8  Score=39.73  Aligned_cols=67  Identities=7%  Similarity=-0.109  Sum_probs=31.9

Q ss_pred             CCcccccccccccCCcce--eEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCc
Q psy5279          54 KPITDAYDFGDELGRGVT--GIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGR  121 (1310)
Q Consensus        54 ~~~~~~~~~~~~~G~g~~--G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~  121 (1310)
                      +..+.|-.+....+....  +|-++......+.......+...+ ....+++..+.+...|.|+|+|.+.
T Consensus        17 s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~rVrA~~~   85 (101)
T d1iarb2          17 TLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLE-PSLRIAASTLKSGISYRARVRAWAQ   85 (101)
T ss_dssp             CEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEECSSC-CEEEECC-----CCCEEEEEEEECG
T ss_pred             eEEEEEccccCCCCccceeeEEEEeeecccceeeeeeeeeccCc-cceEEEECCCCCCCEEEEEEEEEcC
Confidence            444556554443333333  344444444443333333332221 2345677788888999999999773

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.11  E-value=0.72  Score=40.42  Aligned_cols=66  Identities=11%  Similarity=0.044  Sum_probs=41.7

Q ss_pred             CcccccccccccCCcceeEEEEEEeccCCC-ceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          55 PITDAYDFGDELGRGVTGIVYHAVERSSGR-NYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        55 ~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~-~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      .+.-.|......+..+.||.++........ ..+......  ...+++++..+.+...|.|++++.|..
T Consensus        29 sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~A~n~~   95 (111)
T d1x5ka1          29 TIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVV--GNRLTHQIQELTLDTPYYFKIQARNSK   95 (111)
T ss_dssp             CEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTSEEEEES--TTCSEEEECSCCSSSEEEEEEEEECSS
T ss_pred             EEEEEEEccccCCCceeeeEEeeeecCCCCcceeEEEEeC--CCeeEEEECCCCCCCEEEEEEEEEcCC
Confidence            343344555555667899888877654332 222222211  134567888999999999999998744

>d1fnla2 b.1.1.4 (A:87-175) Fc gamma receptor ectodomain (CD32) {Human (Homo sapiens), III [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fc gamma receptor ectodomain (CD32)
species: Human (Homo sapiens), III [TaxId: 9606]

Probab=83.33  E-value=0.29  Score=42.76  Aligned_cols=28  Identities=18%  Similarity=0.256  Sum_probs=24.5

Q ss_pred             cCCCceEEEEEEcccccc-eeeEEEEEec
Q psy5279           6 GRDEGLYSVIARNIASTI-SHSVTVHVED   33 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~-~~~~s~~v~~   33 (1310)
                      .+|+|.|+|.|.|..|+. +.+++|+|.+
T Consensus        60 ~~dsG~Y~C~a~n~~~~~~S~~v~itV~E   88 (89)
T d1fnla2          60 LKDSGSYFCRGLVGSKNVSSETVNITITQ   88 (89)
T ss_dssp             GGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred             eeccceEEEEEEeCCCCeEEeeEEEEEEe
Confidence            589999999999999986 5789999875

>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor receptor TrkA, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: High affinity nerve growth factor receptor TrkA, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.85  E-value=0.14  Score=44.71  Aligned_cols=27  Identities=22%  Similarity=0.065  Sum_probs=24.2

Q ss_pred             ccCCCc-eEEEEEEcccccceeeEEEEE
Q psy5279           5 IGRDEG-LYSVIARNIASTISHSVTVHV   31 (1310)
Q Consensus         5 ~~~d~G-~Yt~~~~n~~g~~~~~~s~~v   31 (1310)
                      -.+|+| .|+|+|+|..|+++.+++|+|
T Consensus        64 ~~~d~G~~Y~C~a~N~~G~~~~s~~l~V   91 (92)
T d2ifga1          64 TSDLNRKNVTCWAENDVGRAEVSVQVNV   91 (92)
T ss_dssp             CSTTTTCCEEECCEETTEECCEEECCCC
T ss_pred             cccccceEEEEEEEcCCCEEEEEEEEEE
Confidence            467899 599999999999999999877

>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=82.45  E-value=0.29  Score=42.51  Aligned_cols=26  Identities=27%  Similarity=0.388  Sum_probs=20.5

Q ss_pred             ccCCCceEEEEEEcccccc-eeeEEEE
Q psy5279           5 IGRDEGLYSVIARNIASTI-SHSVTVH   30 (1310)
Q Consensus         5 ~~~d~G~Yt~~~~n~~g~~-~~~~s~~   30 (1310)
                      -.+|+|.|+|+|+|..|++ +++++|.
T Consensus        66 ~~~D~G~Y~C~a~N~~G~~~s~~v~l~   92 (94)
T d1biha1          66 QASDEGHYQCFAETPAGVASSRVISFR   92 (94)
T ss_dssp             CGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred             ChhcCeEEEEEEEeCCCEEEEEEEEEE
Confidence            4579999999999999985 4555553

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.40  E-value=1.3  Score=38.56  Aligned_cols=67  Identities=10%  Similarity=0.023  Sum_probs=42.1

Q ss_pred             ccCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCcc
Q psy5279          51 TRTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQ  122 (1310)
Q Consensus        51 ~~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~  122 (1310)
                      +.++....| ......+.-+.||.++............ ...+   ..+++++..+.+...|.|++.+.|..
T Consensus        16 s~~si~v~W-~~P~~~~g~i~~Y~v~y~~~~~~~~~~~-~~~~---~~~~~~i~~L~p~t~Y~~~V~a~n~~   82 (98)
T d1x5la1          16 GQTSVSLLW-QEPEQPNGIILEYEIKYYEKDKEMQSYS-TLKA---VTTRATVSGLKPGTRYVFQVRARTSA   82 (98)
T ss_dssp             CSSCEEEEE-CCCSCCCSCCCEEEEEEEESSSCCSSCE-EEEE---SSSEEEECSCCTTCEEEECEEEEETT
T ss_pred             cCCEEEEEE-ECCCCCCCCEEEEEEEeecccccceeeE-EecC---CceEEEECCCCCCCEEEEEEEEEcCC
Confidence            333434445 4445545467899888876544322222 2221   34667889999999999999887744

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=81.68  E-value=0.29  Score=49.41  Aligned_cols=36  Identities=17%  Similarity=0.089  Sum_probs=27.6

Q ss_pred             hhhccCCceecCCCCCCeEeccCCCCcEEEecccccch
Q psy5279         494 DYMHRLSIAHLGLTPGDLLVAHPGGRHLLLTDFGLSRR  531 (1310)
Q Consensus       494 ~y~H~~~i~hrDlkp~Nil~~~~~~~~ikl~DfG~a~~  531 (1310)
                      .-.....++|.|+.|.|||++.+  ..+-|.||+.+..
T Consensus       170 ~~~~~~~liHgD~~~~Nvl~~~~--~~~~iID~~~~~~  205 (255)
T d1nd4a_         170 PDGEDLVVTHGDACLPNIMVENG--RFSGFIDCGRLGV  205 (255)
T ss_dssp             CSSCCEEEECSSCCGGGEEEETT--EEEEECCCTTCEE
T ss_pred             CccCCceEEeCCCCCcceEEeCC--ceEEEEEchhccc
Confidence            33455668999999999999753  2467999998854

>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1 (ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C2 set domains
domain: Intercellular cell adhesion molecule-1 (ICAM-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.89  E-value=0.4  Score=43.09  Aligned_cols=31  Identities=3%  Similarity=-0.108  Sum_probs=27.0

Q ss_pred             cCCCceEEEEEEcccccceeeEEEEEecCCC
Q psy5279           6 GRDEGLYSVIARNIASTISHSVTVHVEDNEN   36 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~~~~~s~~v~~~p~   36 (1310)
                      .+|.|.|||.|+|..|+...++.+.|.+++.
T Consensus        69 ~dd~g~ytC~A~n~~g~~~~~~~~~~s~p~~   99 (103)
T d1iama1          69 DHHGAQFSCRTELDLRPQGLELFENTSAPYQ   99 (103)
T ss_dssp             SCSSCEEEEEEEEECGGGTSCEEEEECCCEE
T ss_pred             hHCCCEEEEEEEeCCCCccCeEeeeEcCCCE
Confidence            5799999999999999999999998876543

>d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-6 receptor alpha chain, domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.82  E-value=1.5  Score=38.35  Aligned_cols=82  Identities=10%  Similarity=-0.051  Sum_probs=45.5

Q ss_pred             CCCCcccccccccccccccCCCccccccccc--ccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCce
Q psy5279          34 NENEYSYRTYARGRQVKTRTKPITDAYDFGD--ELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENE  111 (1310)
Q Consensus        34 ~p~pp~~~~~~~~~~~~~~~~~~~~~~~~~~--~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~  111 (1310)
                      .||||....+-   .+......+.-.|+...  +.+..+..|.++......+.  +.... .. ...+++++..+.+...
T Consensus         1 kP~pP~~l~v~---~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~--~~~~~-~~-~~~~~~~i~~L~p~t~   73 (104)
T d1n26a3           1 QPDPPANITVT---AVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKT--FTTWM-VK-DLQHHCVIHDAWSGLR   73 (104)
T ss_dssp             CCCCCEEEEEE---ECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSC--CEEEE-CG-GGCSEEEESSCCTTCC
T ss_pred             CCcCCCCCEEE---EEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCc--eeeec-cc-cceEEEEECCCCCCCE
Confidence            48888543221   22222333433445443  34555666666666544332  22222 11 1235678889999999


Q ss_pred             eEEEEeecCcc
Q psy5279         112 YSYRTYARGRQ  122 (1310)
Q Consensus       112 y~frt~~~n~~  122 (1310)
                      |.|+|+|.|..
T Consensus        74 Y~~rVra~n~~   84 (104)
T d1n26a3          74 HVVQLRAQEEF   84 (104)
T ss_dssp             EEEEEEEEETT
T ss_pred             EEEEEEEEeCC
Confidence            99999997744

>d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.65  E-value=0.63  Score=40.44  Aligned_cols=68  Identities=12%  Similarity=-0.067  Sum_probs=40.5

Q ss_pred             cCCCcccccccccccCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecCccc
Q psy5279          52 RTKPITDAYDFGDELGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARGRQV  123 (1310)
Q Consensus        52 ~~~~~~~~~~~~~~~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n~~~  123 (1310)
                      ....+.-+|+.+.+.|. .++|.++......+  .++...... .....+.+..+.+...|.|++.|.|..+
T Consensus        16 ~~~si~~~W~p~~~~~~-~~~y~v~~~~~~~~--~~~~~~~~~-~~~~~~~~~~L~~~~~Y~f~V~A~N~~G   83 (95)
T d1bqua1          16 EGKKMRCEWDGGRETHL-ETNFTLKSEWATHK--FADCKAKRD-TPTSCTVDYSTVYFVNIEVWVEAENALG   83 (95)
T ss_dssp             TTSCCEEEEECCSCCSS-CCEEEEEEEETTEE--CCCEECCSS-CTTEEECSSCCCTTSCEEEEEEEEETTE
T ss_pred             cCCEEEEEEeCcccCCC-ceEEEEEEEEcccc--eeEeecccc-cceeeeeeeecCCCcEEEEEEEEEeCCc
Confidence            34556667788888765 46777766644322  222222211 1123345557778899999999988553

>d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.57  E-value=1.7  Score=37.74  Aligned_cols=50  Identities=10%  Similarity=-0.091  Sum_probs=33.9

Q ss_pred             cCCcceeEEEEEEeccCCCceeEEEecccccceeeEEEeeecCCceeEEEEeecC
Q psy5279          66 LGRGVTGIVYHAVERSSGRNYAAKVMTGKGTISHSVTVHVEDNENEYSYRTYARG  120 (1310)
Q Consensus        66 ~G~g~~G~v~~~~~~~~g~~~~~k~~~~~~~~S~s~t~~~~~~~~~y~frt~~~n  120 (1310)
                      .|.-+.+|.++..+...+  .+.....   ..++.+++..+.+...|.|+|++++
T Consensus        37 ~~~~~l~Y~v~~~~~~~~--~~~~~~~---~~~~~~~i~~L~p~t~Y~~rVra~~   86 (103)
T d1f6fb2          37 TGWFTMEYEIRLKPEEAE--EWEIHFT---GHQTQFKVFDLYPGQKYLVQTRCKP   86 (103)
T ss_dssp             TTSSCEEEEEEEEESSCS--CCEEEEE---ETCSEEEECCCCTTCEEEEEEEEEE
T ss_pred             CCcEEEEEEEEEEeCCCc--ceeeecc---cceeEEEeCCCCcceEEEEEEEEEe
Confidence            344567888888776543  2222222   2356678888999999999999876

>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD2, first domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.33  E-value=0.55  Score=41.70  Aligned_cols=28  Identities=18%  Similarity=0.347  Sum_probs=23.7

Q ss_pred             cCCCceEEEEEEcccccc--eeeEEEEEec
Q psy5279           6 GRDEGLYSVIARNIASTI--SHSVTVHVED   33 (1310)
Q Consensus         6 ~~d~G~Yt~~~~n~~g~~--~~~~s~~v~~   33 (1310)
                      -+|+|.|+|.|.|..|..  +.+++|.|.|
T Consensus        69 ~~DsG~Y~c~v~~~~g~~~~~~~~~L~V~E   98 (98)
T d1hnga1          69 RDDSGTYNVTVYSTNGTRILNKALDLRILE   98 (98)
T ss_dssp             GGGCEEEEEEEEETTCCEEEEEEEEEEEEC
T ss_pred             HHHCEEEEEEEEeCCCCEEEEEEEEEEEEC
Confidence            479999999999999987  6677788864