Psyllid ID: psy5299

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70-----
Protein Sequence
MTRLNAVPSVNEDSEVHALIPVWDMCNHENGRSEPKEKTRNRSLLLSPHNAPMAIPVVVPILRRLILQDCAEIYL
Secondary Structure (PSIPRED)
cccccccccccccccHHHHcccccccccccccccHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHHEEcccHHccccccccccccccccccHHHccccccccccccHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mtrlnavpsvnedsevhalipvwdmcnhengrsepkektrnrslllsphnapmaipvVVPILRRLILQDCAEIYL
Flexible Loop (DISEMBL)
mtrlnavpsvnedsevhalIPVWDMCNHENGRSEPKEKTRNRSLllsphnapmaipVVVPILRRLILQDCAEIYL
Low Complexity Region (SEG)
MTRLNAVPSVNEDSEVHALIPVWDMCNHENGRSEPKEKTRNRSLLLSPHNAPMAIPVVVPILRRLILQDCAEIYL
Disordered region (IsUnstruct)
***************VHALIPVWDMCN***********************APMAIPVVVPILRRLILQDCAEIY*
Disordered Region (DISOPRED)
*************SEVHALIPVWDMCNHENGRS*********SLLLSPHNAPMAIPVVVPILRRLILQDCAEIYL
Disordered Region (DISEMBL)
************DSEVHALIPVWDMCNHE************RSLLLSPHNAPMAIPVVVPILRRLILQDCAEIYL
Disordered Region (DISPRO)
***********EDSEVHALIPVWDMCNHE*************SLLLSPHNAPMAIPVVVPILRRLILQDCAEIYL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTRLNAVPSVNEDSEVHALIPVWDMCNHENGRSEPKEKTRNRSLLLSPHNAPMAIPVVVPILRRLILQDCAEIYL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	75	2.2.26 [Sep-21-2011]
Q7SXS7	596	Histone-lysine N-methyltr	yes	N/A	0.413	0.052	0.548	0.0004
Q5ZML9	593	Histone-lysine N-methyltr	yes	N/A	0.413	0.052	0.548	0.0004
E2RBS6	588	Histone-lysine N-methyltr	yes	N/A	0.413	0.052	0.548	0.0004
B7ZUF3	582	Histone-lysine N-methyltr	yes	N/A	0.413	0.053	0.548	0.0005
C1FXW2	589	Histone-lysine N-methyltr	N/A	N/A	0.413	0.052	0.548	0.0005
B1MTJ4	595	Histone-lysine N-methyltr	N/A	N/A	0.413	0.052	0.548	0.0005
Q86TU7	594	Histone-lysine N-methyltr	yes	N/A	0.413	0.052	0.548	0.0005
B2KI88	594	Histone-lysine N-methyltr	N/A	N/A	0.413	0.052	0.548	0.0005
A9X1D0	595	Histone-lysine N-methyltr	N/A	N/A	0.413	0.052	0.548	0.0005
B5FW36	595	Histone-lysine N-methyltr	N/A	N/A	0.413	0.052	0.548	0.0005

>sp|Q7SXS7|SETD3_DANRE Histone-lysine N-methyltransferase setd3 OS=Danio rerio GN=setd3 PE=1 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 1   MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
           MTR N +P+ +      ALIP+WDMCNH NG
Sbjct: 252 MTRQNQIPTADGSRVTLALIPLWDMCNHTNG 282

Histone methyltransferase that methylates 'Lys-36' of histone H3 (H3K36me). H3 'Lys-36' methylation represents a specific tag for epigenetic transcriptional activation. May act as a regulator of apoptosis, possibly by regulating apoptosis related-target genes.
Danio rerio (taxid: 7955)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 3

>sp|Q5ZML9|SETD3_CHICK Histone-lysine N-methyltransferase setd3 OS=Gallus gallus GN=SETD3 PE=2 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 1   MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
           MTR N +P+ +      ALIP+WDMCNH NG
Sbjct: 252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

Histone methyltransferase that methylates 'Lys-36' of histone H3 (H3K36me). H3 'Lys-36' methylation represents a specific tag for epigenetic transcriptional activation.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

>sp|E2RBS6|SETD3_CANFA Histone-lysine N-methyltransferase setd3 OS=Canis familiaris GN=SETD3 PE=3 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 1   MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
           MTR N +P+ +      ALIP+WDMCNH NG
Sbjct: 252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

Histone methyltransferase that methylates 'Lys-36' of histone H3 (H3K36me). H3 'Lys-36' methylation represents a specific tag for epigenetic transcriptional activation.

Canis familiaris (taxid: 9615)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

>sp|B7ZUF3|SETD3_XENTR Histone-lysine N-methyltransferase setd3 OS=Xenopus tropicalis GN=setd3 PE=2 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 1   MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
           MTR N +P+ +      ALIP+WDMCNH NG
Sbjct: 252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

Histone methyltransferase that methylates 'Lys-36' of histone H3 (H3K36me). H3 'Lys-36' methylation represents a specific tag for epigenetic transcriptional activation.

Xenopus tropicalis (taxid: 8364)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

>sp|C1FXW2|SETD3_DASNO Histone-lysine N-methyltransferase setd3 OS=Dasypus novemcinctus GN=SETD3 PE=3 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 1   MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
           MTR N +P+ +      ALIP+WDMCNH NG
Sbjct: 252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

Histone methyltransferase that methylates 'Lys-36' of histone H3 (H3K36me). H3 'Lys-36' methylation represents a specific tag for epigenetic transcriptional activation.

Dasypus novemcinctus (taxid: 9361)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

>sp|B1MTJ4|SETD3_CALMO Histone-lysine N-methyltransferase setd3 OS=Callicebus moloch GN=SETD3 PE=3 SV=2

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 1   MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
           MTR N +P+ +      ALIP+WDMCNH NG
Sbjct: 252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

Histone methyltransferase that methylates 'Lys-36' of histone H3 (H3K36me). H3 'Lys-36' methylation represents a specific tag for epigenetic transcriptional activation.

Callicebus moloch (taxid: 9523)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

>sp|Q86TU7|SETD3_HUMAN Histone-lysine N-methyltransferase setd3 OS=Homo sapiens GN=SETD3 PE=1 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 1   MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
           MTR N +P+ +      ALIP+WDMCNH NG
Sbjct: 252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

Histone methyltransferase that methylates 'Lys-36' of histone H3 (H3K36me). H3 'Lys-36' methylation represents a specific tag for epigenetic transcriptional activation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

>sp|B2KI88|SETD3_RHIFE Histone-lysine N-methyltransferase setd3 OS=Rhinolophus ferrumequinum GN=SETD3 PE=3 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 1   MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
           MTR N +P+ +      ALIP+WDMCNH NG
Sbjct: 252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

Histone methyltransferase that methylates 'Lys-36' of histone H3 (H3K36me). H3 'Lys-36' methylation represents a specific tag for epigenetic transcriptional activation.

Rhinolophus ferrumequinum (taxid: 59479)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

>sp|A9X1D0|SETD3_PAPAN Histone-lysine N-methyltransferase setd3 OS=Papio anubis GN=SETD3 PE=3 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 1   MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
           MTR N +P+ +      ALIP+WDMCNH NG
Sbjct: 252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

Histone methyltransferase that methylates 'Lys-36' of histone H3 (H3K36me). H3 'Lys-36' methylation represents a specific tag for epigenetic transcriptional activation.

Papio anubis (taxid: 9555)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

>sp|B5FW36|SETD3_OTOGA Histone-lysine N-methyltransferase setd3 OS=Otolemur garnettii GN=SETD3 PE=3 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 1   MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
           MTR N +P+ +      ALIP+WDMCNH NG
Sbjct: 252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

Histone methyltransferase that methylates 'Lys-36' of histone H3 (H3K36me). H3 'Lys-36' methylation represents a specific tag for epigenetic transcriptional activation.

Otolemur garnettii (taxid: 30611)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
307195794	245	SET domain-containing protein 3 [Harpegn	0.426	0.130	0.687	9e-06
332020870	232	SET domain-containing protein 3 [Acromyr	0.426	0.137	0.687	1e-05
307190530	232	SET domain-containing protein 3 [Campono	0.426	0.137	0.656	2e-05
380015248	483	PREDICTED: histone-lysine N-methyltransf	0.426	0.066	0.656	2e-05
156538697	403	PREDICTED: histone-lysine N-methyltransf	0.426	0.079	0.593	4e-05
383863095	277	PREDICTED: histone-lysine N-methyltransf	0.413	0.111	0.645	0.0001
350408192	484	PREDICTED: histone-lysine N-methyltransf	0.426	0.066	0.593	0.0004

>gi|307195794|gb|EFN77608.1| SET domain-containing protein 3 [Harpegnathos saltator]

 Score = 54.3 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query: 1  MTRLNAVPSVNEDSEVHALIPVWDMCNHENGR 32
          MTR N VPS +    +HALIP+WDMCNHENGR
Sbjct: 14 MTRQNLVPSPDGSRMIHALIPMWDMCNHENGR 45

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020870|gb|EGI61268.1| SET domain-containing protein 3 [Acromyrmex echinatior]

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query: 1  MTRLNAVPSVNEDSEVHALIPVWDMCNHENGR 32
          MTR N VPS +    +HALIP+WDMCNHENGR
Sbjct: 1  MTRQNLVPSPDGSRMIHALIPMWDMCNHENGR 32

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307190530|gb|EFN74527.1| SET domain-containing protein 3 [Camponotus floridanus]

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 1  MTRLNAVPSVNEDSEVHALIPVWDMCNHENGR 32
          MTR N +PS +    +HALIP+WDMCNHENGR
Sbjct: 1  MTRQNLIPSPDGSRMIHALIPMWDMCNHENGR 32

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380015248|ref|XP_003691619.1| PREDICTED: histone-lysine N-methyltransferase setd3-like [Apis florea]

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 1   MTRLNAVPSVNEDSEVHALIPVWDMCNHENGR 32
           MTR N +PS +    +HALIP+WDMCNHENGR
Sbjct: 252 MTRQNLIPSEDGSRMIHALIPMWDMCNHENGR 283

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156538697|ref|XP_001607787.1| PREDICTED: histone-lysine N-methyltransferase setd3-like [Nasonia vitripennis]

 Score = 52.4 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/32 (59%), Positives = 25/32 (78%)

Query: 1   MTRLNAVPSVNEDSEVHALIPVWDMCNHENGR 32
           MTR N +PS N+ + VH+LIP+WDMCNH  G+
Sbjct: 173 MTRQNVIPSENQSAMVHSLIPMWDMCNHSEGK 204

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383863095|ref|XP_003707018.1| PREDICTED: histone-lysine N-methyltransferase setd3-like [Megachile rotundata]

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/31 (64%), Positives = 24/31 (77%)

Query: 1  MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
          MTR N +PS +    +HALIP+WDMCNHENG
Sbjct: 31 MTRQNLIPSEDGSRMIHALIPMWDMCNHENG 61

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350408192|ref|XP_003488333.1| PREDICTED: histone-lysine N-methyltransferase setd3-like [Bombus impatiens]

 Score = 48.9 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/32 (59%), Positives = 24/32 (75%)

Query: 1   MTRLNAVPSVNEDSEVHALIPVWDMCNHENGR 32
           MTR N +PS +    +HALIP+WDMCNHEN +
Sbjct: 253 MTRQNIIPSKDGSLMIHALIPMWDMCNHENSK 284

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
UNIPROTKB|G3V6U9	596	Setd3 "Protein Setd3" [Rattus	0.413	0.052	0.548	8.3e-05
UNIPROTKB|D4A7S1	290	Setd3 "Protein Setd3" [Rattus	0.413	0.106	0.548	0.00024
UNIPROTKB|Q6NXR6	292	SETD3 "Histone-lysine N-methyl	0.413	0.106	0.548	0.00024
ZFIN|ZDB-GENE-030131-9137	597	setd3 "SET domain containing 3	0.413	0.051	0.548	0.00042
UNIPROTKB|B7ZUF3	582	setd3 "Histone-lysine N-methyl	0.413	0.053	0.548	0.00067
UNIPROTKB|E2RBS6	588	SETD3 "Histone-lysine N-methyl	0.413	0.052	0.548	0.00068
UNIPROTKB|C1FXW2	589	SETD3 "Histone-lysine N-methyl	0.413	0.052	0.548	0.00068
UNIPROTKB|Q5ZML9	593	SETD3 "Histone-lysine N-methyl	0.413	0.052	0.548	0.00069
UNIPROTKB|H9L3V5	594	LOC100857516 "Uncharacterized	0.413	0.052	0.548	0.00069
UNIPROTKB|Q86TU7	594	SETD3 "Histone-lysine N-methyl	0.413	0.052	0.548	0.00069

UNIPROTKB|G3V6U9 Setd3 "Protein Setd3" [Rattus norvegicus (taxid:10116)]

 Score = 96 (38.9 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query:     1 MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
             MTR N +P+ +      ALIP+WDMCNH NG
Sbjct:   252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

GO:0000790 "nuclear chromatin" evidence=IEA

GO:0001102 "RNA polymerase II activating transcription factor binding" evidence=IEA

GO:0003713 "transcription coactivator activity" evidence=IEA

GO:0042800 "histone methyltransferase activity (H3-K4 specific)" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0046975 "histone methyltransferase activity (H3-K36 specific)" evidence=IEA

GO:0051149 "positive regulation of muscle cell differentiation" evidence=IEA

UNIPROTKB|D4A7S1 Setd3 "Protein Setd3" [Rattus norvegicus (taxid:10116)]

 Score = 96 (38.9 bits), Expect = 0.00024, P = 0.00024
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query:     1 MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
             MTR N +P+ +      ALIP+WDMCNH NG
Sbjct:   252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

GO:0003713 "transcription coactivator activity" evidence=IEA

GO:0046975 "histone methyltransferase activity (H3-K36 specific)" evidence=IEA

UNIPROTKB|Q6NXR6 SETD3 "Histone-lysine N-methyltransferase setd3" [Homo sapiens (taxid:9606)]

 Score = 96 (38.9 bits), Expect = 0.00024, P = 0.00024
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query:     1 MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
             MTR N +P+ +      ALIP+WDMCNH NG
Sbjct:   252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

GO:0003713 "transcription coactivator activity" evidence=IEA

GO:0046975 "histone methyltransferase activity (H3-K36 specific)" evidence=IEA

ZFIN|ZDB-GENE-030131-9137 setd3 "SET domain containing 3" [Danio rerio (taxid:7955)]

 Score = 98 (39.6 bits), Expect = 0.00042, P = 0.00042
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query:     1 MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
             MTR N +P+ +      ALIP+WDMCNH NG
Sbjct:   252 MTRQNQIPTADGSRVTLALIPLWDMCNHTNG 282

GO:0018022 "peptidyl-lysine methylation" evidence=IEA

GO:0010452 "histone H3-K36 methylation" evidence=IEA;IDA

GO:0046975 "histone methyltransferase activity (H3-K36 specific)" evidence=IEA;IDA

GO:0003713 "transcription coactivator activity" evidence=IEA;IDA

GO:0018024 "histone-lysine N-methyltransferase activity" evidence=IEA

GO:0016568 "chromatin modification" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0032259 "methylation" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0018026 "peptidyl-lysine monomethylation" evidence=IDA

GO:0018027 "peptidyl-lysine dimethylation" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0018023 "peptidyl-lysine trimethylation" evidence=IDA

UNIPROTKB|B7ZUF3 setd3 "Histone-lysine N-methyltransferase setd3" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 96 (38.9 bits), Expect = 0.00067, P = 0.00067
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query:     1 MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
             MTR N +P+ +      ALIP+WDMCNH NG
Sbjct:   252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

GO:0003713 "transcription coactivator activity" evidence=ISS

GO:0010452 "histone H3-K36 methylation" evidence=ISS

GO:0018023 "peptidyl-lysine trimethylation" evidence=ISS

GO:0018026 "peptidyl-lysine monomethylation" evidence=ISS

GO:0018027 "peptidyl-lysine dimethylation" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0046975 "histone methyltransferase activity (H3-K36 specific)" evidence=ISS

UNIPROTKB|E2RBS6 SETD3 "Histone-lysine N-methyltransferase setd3" [Canis lupus familiaris (taxid:9615)]

 Score = 96 (38.9 bits), Expect = 0.00068, P = 0.00068
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query:     1 MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
             MTR N +P+ +      ALIP+WDMCNH NG
Sbjct:   252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

GO:0010452 "histone H3-K36 methylation" evidence=ISS

GO:0018023 "peptidyl-lysine trimethylation" evidence=ISS

GO:0018026 "peptidyl-lysine monomethylation" evidence=ISS

GO:0018027 "peptidyl-lysine dimethylation" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=ISS

GO:0046975 "histone methyltransferase activity (H3-K36 specific)" evidence=ISS

GO:0051149 "positive regulation of muscle cell differentiation" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0042800 "histone methyltransferase activity (H3-K4 specific)" evidence=IEA

GO:0001102 "RNA polymerase II activating transcription factor binding" evidence=IEA

GO:0000790 "nuclear chromatin" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

UNIPROTKB|C1FXW2 SETD3 "Histone-lysine N-methyltransferase setd3" [Dasypus novemcinctus (taxid:9361)]

 Score = 96 (38.9 bits), Expect = 0.00068, P = 0.00068
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query:     1 MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
             MTR N +P+ +      ALIP+WDMCNH NG
Sbjct:   252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

GO:0003713 "transcription coactivator activity" evidence=ISS

GO:0010452 "histone H3-K36 methylation" evidence=ISS

GO:0018023 "peptidyl-lysine trimethylation" evidence=ISS

GO:0018026 "peptidyl-lysine monomethylation" evidence=ISS

GO:0018027 "peptidyl-lysine dimethylation" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0046975 "histone methyltransferase activity (H3-K36 specific)" evidence=ISS

UNIPROTKB|Q5ZML9 SETD3 "Histone-lysine N-methyltransferase setd3" [Gallus gallus (taxid:9031)]

 Score = 96 (38.9 bits), Expect = 0.00069, P = 0.00069
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query:     1 MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
             MTR N +P+ +      ALIP+WDMCNH NG
Sbjct:   252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0046975 "histone methyltransferase activity (H3-K36 specific)" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=ISS

GO:0018023 "peptidyl-lysine trimethylation" evidence=ISS

GO:0010452 "histone H3-K36 methylation" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0018027 "peptidyl-lysine dimethylation" evidence=ISS

GO:0018026 "peptidyl-lysine monomethylation" evidence=ISS

UNIPROTKB|H9L3V5 LOC100857516 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 96 (38.9 bits), Expect = 0.00069, P = 0.00069
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query:     1 MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
             MTR N +P+ +      ALIP+WDMCNH NG
Sbjct:   253 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 283

GO:0003713 "transcription coactivator activity" evidence=IEA

GO:0046975 "histone methyltransferase activity (H3-K36 specific)" evidence=IEA

GO:0000790 "nuclear chromatin" evidence=IEA

GO:0001102 "RNA polymerase II activating transcription factor binding" evidence=IEA

GO:0042800 "histone methyltransferase activity (H3-K4 specific)" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0051149 "positive regulation of muscle cell differentiation" evidence=IEA

UNIPROTKB|Q86TU7 SETD3 "Histone-lysine N-methyltransferase setd3" [Homo sapiens (taxid:9606)]

 Score = 96 (38.9 bits), Expect = 0.00069, P = 0.00069
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query:     1 MTRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
             MTR N +P+ +      ALIP+WDMCNH NG
Sbjct:   252 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNG 282

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0000790 "nuclear chromatin" evidence=IEA

GO:0001102 "RNA polymerase II activating transcription factor binding" evidence=IEA

GO:0042800 "histone methyltransferase activity (H3-K4 specific)" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0051149 "positive regulation of muscle cell differentiation" evidence=IEA

GO:0046975 "histone methyltransferase activity (H3-K36 specific)" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0018027 "peptidyl-lysine dimethylation" evidence=ISS

GO:0018026 "peptidyl-lysine monomethylation" evidence=ISS

GO:0018023 "peptidyl-lysine trimethylation" evidence=ISS

GO:0010452 "histone H3-K36 methylation" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q86TU7	SETD3_HUMAN	2, ., 1, ., 1, ., 4, 3	0.5483	0.4133	0.0521	yes	N/A
Q7SXS7	SETD3_DANRE	2, ., 1, ., 1, ., 4, 3	0.5483	0.4133	0.0520	yes	N/A
Q5ZML9	SETD3_CHICK	2, ., 1, ., 1, ., 4, 3	0.5483	0.4133	0.0522	yes	N/A
B0VX69	SETD3_CALJA	2, ., 1, ., 1, ., 4, 3	0.5483	0.4133	0.0521	yes	N/A
E2RBS6	SETD3_CANFA	2, ., 1, ., 1, ., 4, 3	0.5483	0.4133	0.0527	yes	N/A
B7ZUF3	SETD3_XENTR	2, ., 1, ., 1, ., 4, 3	0.5483	0.4133	0.0532	yes	N/A
Q91WC0	SETD3_MOUSE	2, ., 1, ., 1, ., 4, 3	0.5483	0.4133	0.0521	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	75
KOG1337|consensus	472		98.82
PF00856	162	SET: SET domain; InterPro: IPR001214 The SET domai	98.43
smart00317	116	SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)	94.49

>KOG1337|consensus

Probab=98.82  E-value=1.3e-09  Score=84.47  Aligned_cols=59  Identities=19%  Similarity=0.266  Sum_probs=53.6

Q ss_pred             CcccccccCc-----CCCCceeeccccccccCCCCCCCCcccccc-cceeeecccCCCCCCcchh
Q psy5299           1 MTRLNAVPSV-----NEDSEVHALIPVWDMCNHENGRSEPKEKTR-NRSLLLSPHNAPMAIPVVV   59 (75)
Q Consensus         1 MTRQN~VP~~-----~~~~~i~ALIPlWDM~NH~~G~itT~yd~~-~r~ec~A~~d~~~~~~v~~   59 (75)
                      +||++..|+.     .+.....+|+|+||||||.++.+..+|+.+ .+.+|.+.+++++|+||..
T Consensus       210 ~sr~~~~~~~~~~~~~~~~~~~~L~P~~D~~NH~~~~~~~~~~~~d~~~~l~~~~~v~~geevfi  274 (472)
T KOG1337|consen  210 NSRAFYLPSLQRLTAGDPDDNEALAPLIDLLNHSPEVIKAGYNQEDEAVELVAERDVSAGEEVFI  274 (472)
T ss_pred             hhhhhccccccccccCCCCcchhhhhhHHhhccCchhccccccCCCCcEEEEEeeeecCCCeEEE
Confidence            5889988876     456679999999999999999999999999 6999999999999999974

>PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco

Probab=98.43  E-value=6e-08  Score=59.14  Aligned_cols=45  Identities=18%  Similarity=0.157  Sum_probs=36.4

Q ss_pred             ceeeccccccccCCCC-CCCCcccc--cc-cceeeecccCCCCCCcchh
Q psy5299          15 EVHALIPVWDMCNHEN-GRSEPKEK--TR-NRSLLLSPHNAPMAIPVVV   59 (75)
Q Consensus        15 ~i~ALIPlWDM~NH~~-G~itT~yd--~~-~r~ec~A~~d~~~~~~v~~   59 (75)
                      ...+|+|++||+||+. +.....|+  .. .+....|.+|.++||+|.+
T Consensus       111 ~~~~l~p~~d~~NHsc~pn~~~~~~~~~~~~~~~~~a~r~I~~GeEi~i  159 (162)
T PF00856_consen  111 DGIALYPFADMLNHSCDPNCEVSFDFDGDGGCLVVRATRDIKKGEEIFI  159 (162)
T ss_dssp             EEEEEETGGGGSEEESSTSEEEEEEEETTTTEEEEEESS-B-TTSBEEE
T ss_pred             cccccCcHhHheccccccccceeeEeecccceEEEEECCccCCCCEEEE
Confidence            4689999999999998 46666776  34 9999999999999999864

The SET domain itself turned out to be an uncommon structure. Although in all three studies, electron density maps revealed the location of the AdoMet or AdoHcy cofactor, the SET domain bears no similarity at all to the canonical/AdoMet-dependent methyltransferase fold. Strictly conserved in the C-terminal motif of the SET domain tyrosine could be involved in abstracting a proton from the protonated amino group of the substrate lysine, promoting its nucleophilic attack on the sulphonium methyl group of the AdoMet cofactor. In contrast to the AdoMet-dependent protein methyltranferases of the classical type, which tend to bind their polypeptide substrates on top of the cofactor, it is noted from the Rubisco LSMT structure that the AdoMet seems to bind in a separate cleft, suggesting how a polypeptide substrate could be subjected to multiple rounds of methylation without having to be released from the enzyme. In contrast, SET7/9 is able to add only a single methyl group to its substrate. It has been demonstrated that association of SET domain and myotubularin-related proteins modulates growth control []. The SET domain-containing Drosophila melanogaster (Fruit fly) protein, enhancer of zeste, has a function in segment determination and the mammalian homologue may be involved in the regulation of gene transcription and chromatin structure. Histone lysine methylation is part of the histone code that regulated chromatin function and epigenetic control of gene function. Histone lysine methyltransferases (HMTase) differ both in their substrate specificity for the various acceptor lysines as well as in their product specificity for the number of methyl groups (one, two, or three) they transfer. With just one exception [], the HMTases belong to SET family that can be classified according to the sequences surrounding the SET domain [, ]. Structural studies on the human SET7/9, a mono-methylase, have revealed the molecular basis for the specificity of the enzyme for the histone-target and the roles of the invariant residues in the SET domain in determining the methylation specificities []. The pre-SET domain, as found in the SUV39 SET family, contains nine invariant cysteine residues that are grouped into two segments separated by a region of variable length. These 9 cysteines coordinate 3 zinc ions to form to form a triangular cluster, where each of the zinc ions is coordinated by 4 four cysteines to give a tetrahedral configuration. The function of this domain is structural, holding together 2 long segments of random coils. The C-terminal region including the post-SET domain is disordered when not interacting with a histone tail and in the absence of zinc. The three conserved cysteines in the post-SET domain form a zinc-binding site when coupled to a fourth conserved cysteine in the knot-like structure close to the SET domain active site []. The structured post-SET region brings in the C-terminal residues that participate in S-adenosylmethine-binding and histone tail interactions. The three conserved cysteine residues are essential for HMTase activity, as replacement with serine abolishes HMTase activity [], []. ; GO: 0005515 protein binding; PDB: 3TG5_A 3S7F_A 3RIB_B 3TG4_A 3S7J_A 3S7D_A 3S7B_A 3H6L_A 3SMT_A 3K5K_A ....

>smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain

Probab=94.49  E-value=0.024  Score=33.61  Aligned_cols=41  Identities=7%  Similarity=-0.039  Sum_probs=30.0

Q ss_pred             ccccccccCCCCCCCC-cccccc---cceeeecccCCCCCCcchh
Q psy5299          19 LIPVWDMCNHENGRSE-PKEKTR---NRSLLLSPHNAPMAIPVVV   59 (75)
Q Consensus        19 LIPlWDM~NH~~G~it-T~yd~~---~r~ec~A~~d~~~~~~v~~   59 (75)
                      +.|+.+++||+...=. ..+...   .+..-.|.+|.++||++.+
T Consensus        70 ~~~~~~~iNHsc~pN~~~~~~~~~~~~~~~~~a~r~I~~GeEi~i  114 (116)
T smart00317       70 KGNIARFINHSCEPNCELLFVEVNGDSRIVIFALRDIKPGEELTI  114 (116)
T ss_pred             cCcHHHeeCCCCCCCEEEEEEEECCCcEEEEEECCCcCCCCEEee
Confidence            7899999999984422 122221   2588899999999999865

Putative methyl transferase, based on outlier plant homologues

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	75
3smt_A	497	Crystal Structure Of Human Set Domain-Containing Pr		8e-04

>pdb|3SMT|A Chain A, Crystal Structure Of Human Set Domain-Containing Protein3 Length = 497

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 2   TRLNAVPSVNEDSEVHALIPVWDMCNHENG 31
           TR N +P+ +      ALIP+WD CNH NG
Sbjct: 252 TRQNQIPTEDGSRVTLALIPLWDXCNHTNG 281
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	75
3smt_A	497	Histone-lysine N-methyltransferase SETD3; histone	99.03
3qxy_A	449	N-lysine methyltransferase SETD6; epigenetics, pro	98.37
2h21_A	440	Ribulose-1,5 bisphosphate carboxylase/oxygenase; S	98.09
3n71_A	490	Histone lysine methyltransferase SMYD1; heart deve	82.33
3qww_A	433	SET and MYND domain-containing protein 2; methyltr	82.24

>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}

Probab=99.03  E-value=3.8e-11  Score=92.94  Aligned_cols=59  Identities=31%  Similarity=0.531  Sum_probs=53.3

Q ss_pred             CcccccccCcCCCCceeeccccccccCCCCCCCCcccccc-cceeeecccCCCCCCcchh
Q psy5299           1 MTRLNAVPSVNEDSEVHALIPVWDMCNHENGRSEPKEKTR-NRSLLLSPHNAPMAIPVVV   59 (75)
Q Consensus         1 MTRQN~VP~~~~~~~i~ALIPlWDM~NH~~G~itT~yd~~-~r~ec~A~~d~~~~~~v~~   59 (75)
                      |||.+.+|..+|.....||+|++||+||+++..++.|+.+ ++.++.|.+++++||||.+
T Consensus       251 ~SRa~~~~~~~g~~~~~~LvP~~Dm~NH~~~~~~~~~~~~~~~~~~~a~~~i~~Geei~i  310 (497)
T 3smt_A          251 MTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALQDFRAGEQIYI  310 (497)
T ss_dssp             HHHCEEEECTTSSSEEEEECTTGGGCEECSCSEEEEEETTTTEEEEEESSCBCTTCEEEE
T ss_pred             ecccccccCcccccccceeechHHhhcCCCcccceeeeccCCeEEEEeCCccCCCCEEEE
Confidence            5799999988877678899999999999999988888887 8899999999999999875

>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*

Probab=98.37  E-value=7.5e-08  Score=73.10  Aligned_cols=58  Identities=16%  Similarity=0.208  Sum_probs=44.1

Q ss_pred             CcccccccCcCC----CCceeeccccccccCCCCCC-CCcccccccceeeecccCCCCCCcchh
Q psy5299           1 MTRLNAVPSVNE----DSEVHALIPVWDMCNHENGR-SEPKEKTRNRSLLLSPHNAPMAIPVVV   59 (75)
Q Consensus         1 MTRQN~VP~~~~----~~~i~ALIPlWDM~NH~~G~-itT~yd~~~r~ec~A~~d~~~~~~v~~   59 (75)
                      |||...+|..++    .....+|+|++||+||+.+. ..-.|+. ++.++.|.+++++||||.+
T Consensus       197 ~SRsf~~~~~~~~~~~~~~~~~LvP~~D~~NH~~~~~~~~~~~~-~~~~~~a~~~i~~Geei~~  259 (449)
T 3qxy_A          197 MAYSFQEPLEEEEDEKEPNSPVMVPAADILNHLANHNANLEYSA-NCLRMVATQPIPKGHEIFN  259 (449)
T ss_dssp             HHHCBCCCCC-----CCCCCCBBCTTGGGCEECSSCSEEEEECS-SEEEEEESSCBCTTCEEEE
T ss_pred             HHHhcccccCcccccccCCceeEeecHHHhcCCCCCCeEEEEeC-CeEEEEECCCcCCCchhhc
Confidence            478887775422    24578999999999999853 4445554 6789999999999999975

>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*

Probab=98.09  E-value=9e-07  Score=65.75  Aligned_cols=44  Identities=20%  Similarity=0.197  Sum_probs=33.9

Q ss_pred             eeeccccccccCCCCCCCC--cccc---------cccceeeecccCCCCCCcchh
Q psy5299          16 VHALIPVWDMCNHENGRSE--PKEK---------TRNRSLLLSPHNAPMAIPVVV   59 (75)
Q Consensus        16 i~ALIPlWDM~NH~~G~it--T~yd---------~~~r~ec~A~~d~~~~~~v~~   59 (75)
                      ..+|+|++||+||+.+.-.  ..|+         ...+.+..|.+++++||||..
T Consensus       183 ~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~  237 (440)
T 2h21_A          183 NLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYI  237 (440)
T ss_dssp             CCBCCSSTTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEE
T ss_pred             ceEEeechHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEE
Confidence            5799999999999987642  1222         236788899999999999975

>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}

Probab=82.33  E-value=0.59  Score=35.64  Aligned_cols=46  Identities=15%  Similarity=0.065  Sum_probs=35.5

Q ss_pred             eeeccccccccCCCCCC-CCccccccc------------ceeeecccCCCCCCcchhHH
Q psy5299          16 VHALIPVWDMCNHENGR-SEPKEKTRN------------RSLLLSPHNAPMAIPVVVPI   61 (75)
Q Consensus        16 i~ALIPlWDM~NH~~G~-itT~yd~~~------------r~ec~A~~d~~~~~~v~~~~   61 (75)
                      -.+|-|...++||+.-+ ....|+..+            +..-.|.+|.++||.+.+..
T Consensus       194 g~gl~p~~s~~NHSC~PN~~~~~~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY  252 (490)
T 3n71_A          194 GVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSY  252 (490)
T ss_dssp             EEEECTTGGGCEECSSCSEEEEEECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECS
T ss_pred             eEEEchhhhhcccCCCCCeeEEecCCccccccccccccceEEEEECCCCCCCCEEEEee
Confidence            36899999999999844 444444432            78899999999999987643

>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*

Probab=82.24  E-value=0.78  Score=34.43  Aligned_cols=44  Identities=14%  Similarity=-0.004  Sum_probs=35.0

Q ss_pred             eeeccccccccCCCCCC-CCcccccccceeeecccCCCCCCcchhH
Q psy5299          16 VHALIPVWDMCNHENGR-SEPKEKTRNRSLLLSPHNAPMAIPVVVP   60 (75)
Q Consensus        16 i~ALIPlWDM~NH~~G~-itT~yd~~~r~ec~A~~d~~~~~~v~~~   60 (75)
                      -.+|-|...++||+.-+ ....|+. ....-.|.+|.++||.+.+.
T Consensus       195 g~gl~p~~s~~NHsC~PN~~~~~~~-~~~~~~a~r~I~~Geel~i~  239 (433)
T 3qww_A          195 GSAIFPDVALMNHSCCPNVIVTYKG-TLAEVRAVQEIHPGDEVFTS  239 (433)
T ss_dssp             EEEECTTGGGSEECSSCSEEEEEET-TEEEEEESSCBCTTCEEEEC
T ss_pred             eEEecccccccCCCCCCCceEEEcC-CEEEEEeccCcCCCCEEEEe
Confidence            47899999999999844 4444543 67788999999999998653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	75
d2h2ja2	261	RuBisCo LSMT catalytic domain {Garden pea (Pisum s	97.83

>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]}

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: RuBisCo LSMT catalytic domain
domain: RuBisCo LSMT catalytic domain
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=97.83  E-value=4.1e-06  Score=54.26  Aligned_cols=44  Identities=20%  Similarity=0.220  Sum_probs=33.1

Q ss_pred             eeeccccccccCCCCCCCCcc-ccc---------c-cceeeecccCCCCCCcchh
Q psy5299          16 VHALIPVWDMCNHENGRSEPK-EKT---------R-NRSLLLSPHNAPMAIPVVV   59 (75)
Q Consensus        16 i~ALIPlWDM~NH~~G~itT~-yd~---------~-~r~ec~A~~d~~~~~~v~~   59 (75)
                      ..+|+|+.||+||+...-.+. |+.         . ...+-.|.+|+++||+|.+
T Consensus       182 ~~~l~P~~d~~NHsc~pn~~~~~~~~~~~~~~~~~~~~~~l~A~r~I~~GEEI~i  236 (261)
T d2h2ja2         182 NLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYI  236 (261)
T ss_dssp             CCBCCTTGGGCEECSSCCSCCCCCC-----------CEEEEECSSCCCTTSBCEE
T ss_pred             cccchhhhHHhhcCCCCCcccccccccCcccccCCCcEEEEEECCCCCCCCEEEE
Confidence            468999999999998553332 221         1 4578889999999999864