Psyllid ID: psy5301

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130--
Protein Sequence
MVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRTY
Secondary Structure (PSIPRED)
cEEEEEEccccccccEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEcccccccEEEEEEEcccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cEEEEEEccccccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mvifhiekgpfiedFYQCVTygfytepwqeQLYSCFSLFFMFICPLLILVTTYVSTFLTISRKCFMSFMVIFHIekgpfiedFYQCVTygfytepwqeQLYSCFSLFFMFICPLLILVTTYVSTFLTISRTY
Flexible Loop (DISEMBL)
MVIFhiekgpfieDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRTY
Low Complexity Region (SEG)
MVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRTY
Disordered region (IsUnstruct)
*VIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTI****
Disordered Region (DISOPRED)
MVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRT*
Disordered Region (DISEMBL)
MVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRTY
Disordered Region (DISPRO)
MVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRT*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRTY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	132	2.2.26 [Sep-21-2011]
Q2V2K5	407	Gonadotropin-releasing ho	N/A	N/A	0.454	0.147	0.412	6e-05
O42329	379	Gonadotropin-releasing ho	N/A	N/A	0.583	0.203	0.301	0.0004

>sp|Q2V2K5|GNRHR_OCTVU Gonadotropin-releasing hormone receptor OS=Octopus vulgaris GN=GNRHR PE=2 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)

Query: 70  VIFHIEKGPFIED-FYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTI 128
           VIF  ++  F +  F+QC     Y   WQ+QLYS  SL  +F+ PL+I+VT+Y+    TI
Sbjct: 166 VIFQEQRKMFRQGMFHQC--RDSYNALWQKQLYSASSLILLFVIPLIIMVTSYLLILKTI 223

Query: 129 SRT 131
            +T
Sbjct: 224 VKT 226

Receptor for gonadotropin releasing hormone (GnRH) that mediates the action of GnRH to stimulate the secretion of the gonadotropic hormones luteinizing hormone (LH) and follicle-stimulating hormone (FSH). This receptor mediates its action by association with G-proteins that activate a phosphatidylinositol-calcium second messenger system. Ligand interaction triggers steroidogenesis in spermatozoa and follicles. Appears to be involved in contraction of the radula retractor muscle.
Octopus vulgaris (taxid: 6645)

>sp|O42329|GNRR2_CLAGA Gonadotropin-releasing hormone II receptor OS=Clarias gariepinus PE=2 SV=2

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 48  ILVTTYVSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLF 107
           +L+T ++ + L  S + F     IF   K   + DF QC T+G + + WQE  Y+ F   
Sbjct: 162 MLLTAWILSLLLASPQLF-----IFRAIKAKGV-DFVQCATHGSFQQHWQETAYNMFHFV 215

Query: 108 FMFICPLLILVTTYVSTFLTISR 130
            +++ PLL++   Y    + I+R
Sbjct: 216 TLYVFPLLVMSLCYTRILVEINR 238

Receptor for gonadotropin releasing hormone II (GnRH II). This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system.

Clarias gariepinus (taxid: 13013)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	132
322797460	158	hypothetical protein SINV_06836 [Solenop	0.484	0.405	0.734	1e-20
307181813	223	Gonadotropin-releasing hormone II recept	0.621	0.367	0.588	1e-20
350401174	410	PREDICTED: gonadotropin-releasing hormon	0.568	0.182	0.625	2e-20
340720669	410	PREDICTED: gonadotropin-releasing hormon	0.477	0.153	0.730	5e-20
322782694	219	hypothetical protein SINV_11533 [Solenop	0.484	0.292	0.671	9e-20
157129464	298	corazonin receptor [Aedes aegypti]	0.598	0.265	0.583	2e-19
383860410	414	PREDICTED: gonadotropin-releasing hormon	0.477	0.152	0.698	2e-19
38349490	611	G-protein coupled receptor [Anopheles ga	0.727	0.157	0.469	3e-19
31242249	612	AGAP001558-PA [Anopheles gambiae str. PE	0.727	0.156	0.469	3e-19
170062992	297	corazonin receptor [Culex quinquefasciat	0.598	0.265	0.583	4e-19

>gi|322797460|gb|EFZ19531.1| hypothetical protein SINV_06836 [Solenopsis invicta]

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/64 (73%), Positives = 54/64 (84%)

Query: 68  FMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLT 127
           F+ +FH+ +GPFIE+F QCVT+G YTEPWQEQLY  FSLFFMFI PL IL+TTYVST LT
Sbjct: 15  FIAVFHVAQGPFIEEFTQCVTHGVYTEPWQEQLYGGFSLFFMFILPLAILITTYVSTVLT 74

Query: 128 ISRT 131
           ISR 
Sbjct: 75  ISRN 78

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307181813|gb|EFN69256.1| Gonadotropin-releasing hormone II receptor [Camponotus floridanus]

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/85 (58%), Positives = 68/85 (80%), Gaps = 3/85 (3%)

Query: 50  VTTYVSTFLTISRKC-FMSF--MVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSL 106
           +T ++S    + +   ++SF  + IFH+ +GPFIE+F QCVT+GFYTEPWQEQLY+ FSL
Sbjct: 33  LTDFISNNGLVGQSAEYLSFENVAIFHVAQGPFIEEFPQCVTHGFYTEPWQEQLYASFSL 92

Query: 107 FFMFICPLLILVTTYVSTFLTISRT 131
           FFMF+ PL+IL+TTYVST +TISR+
Sbjct: 93  FFMFLLPLVILITTYVSTVITISRS 117

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350401174|ref|XP_003486073.1| PREDICTED: gonadotropin-releasing hormone receptor-like [Bombus impatiens]

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/80 (62%), Positives = 58/80 (72%), Gaps = 5/80 (6%)

Query: 3   IFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISR 62
           IFH+ +GPFIEDF QCVTYGFYTEPWQEQLY  F LFFMF+ PL ILV TYVST +TISR
Sbjct: 211 IFHVVQGPFIEDFKQCVTYGFYTEPWQEQLYGSFVLFFMFLLPLAILVATYVSTVITISR 270

Query: 63  -----KCFMSFMVIFHIEKG 77
                K  ++  +I H+   
Sbjct: 271 SERIFKLKLTNNIIRHVNGN 290

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340720669|ref|XP_003398755.1| PREDICTED: gonadotropin-releasing hormone receptor-like [Bombus terrestris]

 Score =  102 bits (254), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 46/63 (73%), Positives = 54/63 (85%)

Query: 69  MVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTI 128
           ++IFH+ +GPFIEDF QCVTYGFYTEPWQEQLY  F LFF+F+ PL ILV TYVST +TI
Sbjct: 209 IIIFHVVQGPFIEDFKQCVTYGFYTEPWQEQLYGSFVLFFIFLLPLAILVATYVSTVITI 268

Query: 129 SRT 131
           SR+
Sbjct: 269 SRS 271

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322782694|gb|EFZ10548.1| hypothetical protein SINV_11533 [Solenopsis invicta]

 Score =  101 bits (252), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 68  FMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLT 127
           ++ +FH+ +GPF+++F QCVTYG YTEPWQEQLY  FSLF MFI PL IL+TT+VST LT
Sbjct: 11  YIAVFHVAQGPFVDEFTQCVTYGVYTEPWQEQLYGGFSLFLMFILPLAILITTHVSTVLT 70

Query: 128 ISRT 131
           ISR+
Sbjct: 71  ISRS 74

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157129464|ref|XP_001655399.1| corazonin receptor [Aedes aegypti]

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/84 (58%), Positives = 60/84 (71%), Gaps = 5/84 (5%)

Query: 2  VIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTIS 61
          +IF + KGPF+EDFYQCVT+GFYT+ WQEQLY+ F+L FMFI PLLIL+ TY+STF TIS
Sbjct: 1  MIFRVAKGPFLEDFYQCVTHGFYTDRWQEQLYTTFTLVFMFIIPLLILIGTYLSTFRTIS 60

Query: 62 RKCFMSFMVIFHIEKGPFIEDFYQ 85
               S   IF IE       +Y+
Sbjct: 61 -----SSEKIFRIETSAVDRSYYR 79

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383860410|ref|XP_003705682.1| PREDICTED: gonadotropin-releasing hormone receptor-like [Megachile rotundata]

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/63 (69%), Positives = 54/63 (85%)

Query: 69  MVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTI 128
           ++IFH+ +GPFIE+F QCVT+GFYTE WQEQLY   SLFFMF+ PL IL+TTYVST +TI
Sbjct: 203 IIIFHVARGPFIEEFTQCVTHGFYTETWQEQLYVSLSLFFMFLLPLAILITTYVSTIITI 262

Query: 129 SRT 131
           SR+
Sbjct: 263 SRS 265

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|38349490|gb|AAQ67361.1| G-protein coupled receptor [Anopheles gambiae]

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 74/115 (64%), Gaps = 19/115 (16%)

Query: 36  FSLFFMFICPLLILVTTYVS-----TFLTISRKC--------FMSFMV------IFHIEK 76
           FSL+      +L+ V  +V+       L  +R+C         +SF++      IF + K
Sbjct: 265 FSLYLSTYVLVLVGVDRWVAVKYPMKSLNTARRCHRFLFVAYLLSFLLSTPQWMIFRVAK 324

Query: 77  GPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRT 131
           GPF+EDFYQCVT+GFYT+ WQEQLY+ F+L FMFI PLLIL+ TY+STF+TIS +
Sbjct: 325 GPFVEDFYQCVTHGFYTDRWQEQLYTTFTLVFMFIIPLLILIGTYLSTFMTISSS 379

Source: Anopheles gambiae

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|31242249|ref|XP_321555.1| AGAP001558-PA [Anopheles gambiae str. PEST] gi|19572378|emb|CAD27924.1| putative G-protein coupled receptor [Anopheles gambiae] gi|30173795|gb|EAA01361.2| AGAP001558-PA [Anopheles gambiae str. PEST]

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 74/115 (64%), Gaps = 19/115 (16%)

Query: 36  FSLFFMFICPLLILVTTYVS-----TFLTISRKC--------FMSFMV------IFHIEK 76
           FSL+      +L+ V  +V+       L  +R+C         +SF++      IF + K
Sbjct: 266 FSLYLSTYVLVLVGVDRWVAVKYPMKSLNTARRCHRFLFVAYLLSFLLSTPQWMIFRVAK 325

Query: 77  GPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRT 131
           GPF+EDFYQCVT+GFYT+ WQEQLY+ F+L FMFI PLLIL+ TY+STF+TIS +
Sbjct: 326 GPFVEDFYQCVTHGFYTDRWQEQLYTTFTLVFMFIIPLLILIGTYLSTFMTISSS 380

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170062992|ref|XP_001866911.1| corazonin receptor [Culex quinquefasciatus] gi|167880759|gb|EDS44142.1| corazonin receptor [Culex quinquefasciatus]

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 49/84 (58%), Positives = 60/84 (71%), Gaps = 5/84 (5%)

Query: 2  VIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTIS 61
          +IF + KGPF+EDFYQCVT+GFY+E WQEQLY+ F+L FMFI PLLIL+ TY+STF TIS
Sbjct: 1  MIFRVAKGPFLEDFYQCVTHGFYSERWQEQLYTTFTLVFMFIIPLLILIGTYLSTFRTIS 60

Query: 62 RKCFMSFMVIFHIEKGPFIEDFYQ 85
               S   IF IE       +Y+
Sbjct: 61 -----SSEKIFRIETSAVDRSYYR 79

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	132
FB|FBgn0036278	579	GRHRII "GRHRII" [Drosophila me	0.803	0.183	0.464	8.7e-18
UNIPROTKB|F1P1J8	345	GNRHR "Uncharacterized protein	0.477	0.182	0.380	4.2e-09
ZFIN|ZDB-GENE-090128-2	377	gnrhr1 "gonadotropin releasing	0.583	0.204	0.277	8.2e-05
ZFIN|ZDB-GENE-090128-3	412	gnrhr2 "gonadotropin releasing	0.462	0.148	0.360	4.1e-08
UNIPROTKB|F1NN71	371	CGNRH-R "Uncharacterized prote	0.590	0.210	0.309	5.1e-06
ZFIN|ZDB-GENE-090128-1	336	gnrhr3 "gonadotropin releasing	0.469	0.184	0.349	5.7e-07
ZFIN|ZDB-GENE-050419-76	406	gnrhr4 "gonadotropin releasing	0.477	0.155	0.333	7.6e-06
FB|FBgn0025595	455	GRHR "Gonadotropin-releasing h	0.462	0.134	0.311	9.1e-06
UNIPROTKB|P49922	328	GNRHR "Gonadotropin-releasing	0.477	0.192	0.317	0.00011
UNIPROTKB|F1SDF2	286	GNRHR2 "Uncharacterized protei	0.446	0.206	0.333	0.00011

FB|FBgn0036278 GRHRII "GRHRII" [Drosophila melanogaster (taxid:7227)]

 Score = 225 (84.3 bits), Expect = 8.7e-18, P = 8.7e-18
 Identities = 53/114 (46%), Positives = 67/114 (58%)

Query:    16 YQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRKCFMSFMVIFHIE 75
             Y  V  G   + W    Y   SL     C  L L  TY+ + L +S   F     IFH+ 
Sbjct:   214 YVLVLIG--VDRWIAVKYPMKSLNMAKRCHRL-LGGTYILS-LVLSLPQFF----IFHVA 265

Query:    76 KGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTIS 129
             +GPF+E+FYQCVT+GFYT  WQEQ+Y+ F+L F F+ PL IL  TY+STF TIS
Sbjct:   266 RGPFVEEFYQCVTHGFYTADWQEQMYATFTLVFTFLLPLCILFGTYMSTFRTIS 319

GO:0016500 "protein-hormone receptor activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS;NAS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISS;NAS

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=ISS

GO:0008188 "neuropeptide receptor activity" evidence=ISS

GO:0004930 "G-protein coupled receptor activity" evidence=ISS;NAS

GO:0097003 "adipokinetic hormone receptor activity" evidence=ISS

GO:0097004 "adipokinetic hormone binding" evidence=ISS

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0001653 "peptide receptor activity" evidence=IDA

GO:0035237 "corazonin receptor activity" evidence=IDA;NAS

UNIPROTKB|F1P1J8 GNRHR "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 124 (48.7 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
 Identities = 24/63 (38%), Positives = 35/63 (55%)

Query:     1 MVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTI 60
             + +FH        +F QC T+G + +PW E LY+  S   +F+ PLLI+V  Y    L I
Sbjct:   148 LFLFHTVTLHAPHNFTQCTTHGSFPQPWHETLYNMLSFSCLFLLPLLIMVCCYTRILLEI 207

Query:    61 SRK 63
             SR+
Sbjct:   208 SRR 210

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-090128-2 gnrhr1 "gonadotropin releasing hormone receptor 1" [Danio rerio (taxid:7955)]

 Score = 102 (41.0 bits), Expect = 8.2e-05, P = 8.2e-05
 Identities = 23/83 (27%), Positives = 41/83 (49%)

Query:    48 ILVTTYVSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLF 107
             +L+  ++ + L  S + F     I+   K   + DF QC T+G +   WQE  Y+ F   
Sbjct:   158 VLLAAWILSVLLASPQLF-----IYRALKAEGV-DFVQCATHGSFRHRWQETAYNMFHFV 211

Query:   108 FMFICPLLILVTTYVSTFLTISR 130
              +++ PLL++   Y    + I+R
Sbjct:   212 TLYVFPLLVMSFCYTRILVEINR 234

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA;IDA

GO:0097211 "cellular response to gonadotropin-releasing hormone" evidence=IDA

GO:0007165 "signal transduction" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

ZFIN|ZDB-GENE-090128-3 gnrhr2 "gonadotropin releasing hormone receptor 2" [Danio rerio (taxid:7955)]

 Score = 133 (51.9 bits), Expect = 4.1e-08, P = 4.1e-08
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query:     3 IFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISR 62
             +FH+ +    + F QC TYG ++  WQE  Y+ F+  F+F+ PL I+++ Y      IS+
Sbjct:   180 VFHVVEIDSPKQFVQCTTYGSFSSRWQETFYNMFTFTFLFLLPLFIMISCYTRILFEISK 239

Query:    63 K 63
             K
Sbjct:   240 K 240

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;IDA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0097211 "cellular response to gonadotropin-releasing hormone" evidence=IDA

UNIPROTKB|F1NN71 CGNRH-R "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 113 (44.8 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 26/84 (30%), Positives = 45/84 (53%)

Query:    47 LILVTTYVSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSL 106
             L+L   ++ + L  S + F+     FH+   P   +F QCVT+G +   W+E +Y+ F+ 
Sbjct:   152 LLLRAAWLGSVLLASPQLFL-----FHVHTVPG-GNFTQCVTHGSFRAHWEETVYNMFTF 205

Query:   107 FFMFICPLLILVTTYVSTFLTISR 130
               ++I PL I++  YV     IS+
Sbjct:   206 TTLYITPLSIMIVCYVRIIWEISK 229

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-090128-1 gnrhr3 "gonadotropin releasing hormone receptor 3" [Danio rerio (taxid:7955)]

 Score = 121 (47.7 bits), Expect = 5.7e-07, P = 5.7e-07
 Identities = 22/63 (34%), Positives = 36/63 (57%)

Query:     1 MVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTI 60
             + IFH  K   + DF QCVT+G ++E W E  Y+ F    +++ PLL++   Y    + I
Sbjct:   159 LFIFHTVKAKSV-DFTQCVTHGSFSERWHETAYNMFHFVTLYVIPLLVMSCCYTCILIEI 217

Query:    61 SRK 63
             +R+
Sbjct:   218 NRQ 220

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA;IDA

GO:0097211 "cellular response to gonadotropin-releasing hormone" evidence=IDA

GO:0007165 "signal transduction" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

ZFIN|ZDB-GENE-050419-76 gnrhr4 "gonadotropin releasing hormone receptor 4" [Danio rerio (taxid:7955)]

 Score = 112 (44.5 bits), Expect = 7.6e-06, P = 7.6e-06
 Identities = 21/63 (33%), Positives = 34/63 (53%)

Query:     1 MVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTI 60
             M +FH        +F QC T G + + WQE +Y+ F+   +F+ PL I++  Y    + I
Sbjct:   182 MFLFHNVTITVPANFTQCTTRGSFVKHWQETIYNMFTFICLFLIPLAIMICCYTRILVEI 241

Query:    61 SRK 63
             SR+
Sbjct:   242 SRR 244

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;IDA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0097211 "cellular response to gonadotropin-releasing hormone" evidence=IDA

FB|FBgn0025595 GRHR "Gonadotropin-releasing hormone receptor" [Drosophila melanogaster (taxid:7227)]

 Score = 112 (44.5 bits), Expect = 9.1e-06, P = 9.1e-06
 Identities = 19/61 (31%), Positives = 36/61 (59%)

Query:     3 IFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISR 62
             +FH+E+ P +  ++QCV +  +   + E+LY   S+  M+  PL++ +  Y + +L I R
Sbjct:   173 LFHLEEHPAVTGYFQCVIFNSFRSDFDEKLYQAASMCSMYAFPLIMFIYCYGAIYLEIYR 232

Query:    63 K 63
             K
Sbjct:   233 K 233

GO:0016021 "integral to membrane" evidence=ISS;IDA

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=ISS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISS;NAS;IDA

GO:0008188 "neuropeptide receptor activity" evidence=ISS;NAS

GO:0097004 "adipokinetic hormone binding" evidence=IPI

GO:0097003 "adipokinetic hormone receptor activity" evidence=IDA

GO:0004930 "G-protein coupled receptor activity" evidence=ISS

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0001653 "peptide receptor activity" evidence=IDA

GO:0055088 "lipid homeostasis" evidence=IMP

GO:0016042 "lipid catabolic process" evidence=IMP

GO:0033500 "carbohydrate homeostasis" evidence=IMP

GO:0070328 "triglyceride homeostasis" evidence=IMP

UNIPROTKB|P49922 GNRHR "Gonadotropin-releasing hormone receptor" [Sus scrofa (taxid:9823)]

 Score = 100 (40.3 bits), Expect = 0.00011, P = 0.00011
 Identities = 20/63 (31%), Positives = 33/63 (52%)

Query:    68 FMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLT 127
             F +I   +     E F QCVT+G + + W +  Y+ F+   +FI PLLI++        T
Sbjct:   178 FRMIHLADSSGQTEGFSQCVTHGSFPQWWHQAFYNFFTFSCLFIIPLLIMLICNAKIMFT 237

Query:   128 ISR 130
             ++R
Sbjct:   238 LTR 240

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA

UNIPROTKB|F1SDF2 GNRHR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 99 (39.9 bits), Expect = 0.00011, P = 0.00011
 Identities = 21/63 (33%), Positives = 33/63 (52%)

Query:     1 MVIFHIEK--GPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFL 58
             + +FH  +  GP    F QCVT G +   WQE  Y+ F+   +F+ PL ++   Y    L
Sbjct:    80 LFLFHTVRRAGPV--PFTQCVTKGSFKAQWQETTYNLFTFCCLFLLPLTVMTICYSRIVL 137

Query:    59 TIS 61
             ++S
Sbjct:   138 SVS 140

GO:0016021 "integral to membrane" evidence=IEA

GO:0004968 "gonadotropin-releasing hormone receptor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	132
KOG4219|consensus	423		98.35
PHA03234	338	DNA packaging protein UL33; Provisional	98.09
PHA02834	323	chemokine receptor-like protein; Provisional	97.82
PHA03235	409	DNA packaging protein UL33; Provisional	97.8
PHA02638	417	CC chemokine receptor-like protein; Provisional	97.76
PF00001	257	7tm_1: 7 transmembrane receptor (rhodopsin family)	97.31
PHA03087	335	G protein-coupled chemokine receptor-like protein;	97.0
PHA03235	409	DNA packaging protein UL33; Provisional	95.81
PHA03234	338	DNA packaging protein UL33; Provisional	95.7
KOG4219|consensus	423		94.92
PHA02638	417	CC chemokine receptor-like protein; Provisional	93.77
PHA02834	323	chemokine receptor-like protein; Provisional	92.91
PF00001	257	7tm_1: 7 transmembrane receptor (rhodopsin family)	91.0
KOG4220|consensus	503		90.82
PHA03087	335	G protein-coupled chemokine receptor-like protein;	81.93

>KOG4219|consensus

Probab=98.35  E-value=9.7e-07  Score=69.51  Aligned_cols=78  Identities=18%  Similarity=0.191  Sum_probs=57.1

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecC--CccCceeeee-ccCC--CChhHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGP--FIEDFYQCVT-YGFY--TEPWQE---QLYSCFSLFFMFICPLLILVTTYVSTF  125 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~--~~~~~~~C~~-~~~~--~~~~~~---~~~~~~~~~~~F~iPl~ii~~cY~~I~  125 (132)
                      ++++|.++...+.|+..+++..+.+  ++.....|.. +.+.  +.+...   +.|+...+++.|++|++||.++|++|+
T Consensus       154 IllIW~lA~l~a~P~~l~s~v~~~~~~d~~~~~~~~~~~pe~~~~~~~~~~~~~~y~~vl~~lqYflPliVl~~~Yt~ia  233 (423)
T KOG4219|consen  154 ILLIWALALLLALPQLLYSSVEELYLYDGESRVVCVTAWPEHVCPTENESLLMQGYNYVLLFLQYFLPLIVLGLAYTVIA  233 (423)
T ss_pred             hHHHHHHHHHHhccceeeeeeEEeeccCCcceEEEEEecccccCCcchhhhhhcceeeeehhHHHHHHHHHHHHHHHHHH
Confidence            5679999999999999998877643  2333567742 2221  222211   237777788899999999999999999


Q ss_pred             HHHhhc
Q psy5301         126 LTISRT  131 (132)
Q Consensus       126 ~~L~~~  131 (132)
                      ++||.+
T Consensus       234 v~LW~~  239 (423)
T KOG4219|consen  234 VTLWGR  239 (423)
T ss_pred             HHHHhc
Confidence            999974

>PHA03234 DNA packaging protein UL33; Provisional

Probab=98.09  E-value=9.3e-06  Score=63.15  Aligned_cols=71  Identities=15%  Similarity=0.200  Sum_probs=45.2

Q ss_pred             HhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCCChhHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5301          56 TFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYS---CFSLFFMFICPLLILVTTYVSTFLTISR  130 (132)
Q Consensus        56 iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~---~~~~~~~F~iPl~ii~~cY~~I~~~L~~  130 (132)
                      +.|.++...++|.+...+..+.+  ++...|  .+.++++.....+.   ...++++|++|+.+|++||.+|.+++++
T Consensus       153 ~~Wi~s~l~~~P~l~~~~~~~~~--~~~~~C--~~~~~~~~~~~~~~~~~~~~~~~~f~iPl~im~~cY~~I~~~L~~  226 (338)
T PHA03234        153 ILFLASAMCAIPAALFVKTEGKK--GNYGKC--NIHISSKKAYDLFIAIKIVFCFIWGIFPTMIFSFFYVIFCKALHA  226 (338)
T ss_pred             HHHHHHHHHHhhHhHeeeeeecC--CCCCcC--cccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            45888888899987654432221  223579  44554322112221   2234557899999999999999999875

>PHA02834 chemokine receptor-like protein; Provisional

Probab=97.82  E-value=2.7e-05  Score=59.92  Aligned_cols=73  Identities=21%  Similarity=0.358  Sum_probs=45.9

Q ss_pred             HHhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5301          55 STFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTE-PWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRT  131 (132)
Q Consensus        55 ~iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~~-~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~~  131 (132)
                      ..+|.++...++|.+...+..+   .++...|. +...++ ..+...+....++++|++|+++|.+||.+|.++++++
T Consensus       146 ~~iWi~s~l~~~P~~~~~~~~~---~~~~~~C~-~~~~~~~~~~~~~~~~~~~i~~f~iPl~ii~~~Y~~I~~~l~~~  219 (323)
T PHA02834        146 VAAWVCSVILSMPAMVLYYVDN---TDNLKQCI-FNDYHENFSWSAFFNFEINIFGIVIPLIILIYCYSKILYTLKNC  219 (323)
T ss_pred             HHHHHHHHHHHhhHHHHHHhcc---CCCceEEe-ccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3579998888888865432211   12335784 111111 1122233344457889999999999999999999763

>PHA03235 DNA packaging protein UL33; Provisional

Probab=97.80  E-value=3.1e-05  Score=61.80  Aligned_cols=75  Identities=15%  Similarity=0.189  Sum_probs=48.1

Q ss_pred             HHHhhhhhccceeeeEEEEEeee----cCCccCceeeeeccCCCChh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEK----GPFIEDFYQCVTYGFYTEPW---QEQLYSCFSLFFMFICPLLILVTTYVSTFL  126 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~----~~~~~~~~~C~~~~~~~~~~---~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~  126 (132)
                      +.++|.++...++|.+++.+...    .+.+.+...|.  ..++++.   ....|.+..+++.|++|+++|++||.+|.+
T Consensus       152 i~~iWi~sll~s~P~~~~~~~~~~~~~~~~~~~~~~C~--~~~~~~~~~~~~~~y~i~l~i~~f~iPl~im~~~Y~~I~~  229 (409)
T PHA03235        152 LGLTWFASLICSGPAPVYTTVVAHDDVDPEAPGYETCV--IYFRADQVKTVLSTFKVLLTLVWGIAPVVMMTWFYTFFYR  229 (409)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhccccCcCCCCcceee--EeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45689999889999754322111    11112345794  2333221   123455556677899999999999999999


Q ss_pred             HHhh
Q psy5301         127 TISR  130 (132)
Q Consensus       127 ~L~~  130 (132)
                      ++++
T Consensus       230 ~l~~  233 (409)
T PHA03235        230 TLKR  233 (409)
T ss_pred             HHHh
Confidence            9975

>PHA02638 CC chemokine receptor-like protein; Provisional

Probab=97.76  E-value=3.4e-05  Score=61.65  Aligned_cols=75  Identities=13%  Similarity=0.153  Sum_probs=48.1

Q ss_pred             HHHhhhhhccceeeeEEEEEeeec-----CCc--cCceeeeeccCCCC-----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKG-----PFI--EDFYQCVTYGFYTE-----PWQEQLYSCFSLFFMFICPLLILVTTY  121 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~-----~~~--~~~~~C~~~~~~~~-----~~~~~~~~~~~~~~~F~iPl~ii~~cY  121 (132)
                      +.++|.++...++|.++..+..+.     +.+  .....|.  ..++.     ..+...+.+...+++|++|+++|.+||
T Consensus       216 ~~~iW~~s~l~slP~~~~~~~~~~~~~~~~~~~~~~~~~C~--~~~~~~~~~~~~~~~~~~~~~~i~~f~lPl~vmi~cY  293 (417)
T PHA02638        216 CIISWILSLIITSPAYFIFEASNIIFSAQDSNETISNYQCT--LIEDNEKNNISFLGRILQFEINILGMFIPIIIFAFCY  293 (417)
T ss_pred             HhHHHHHHHHHHHHHHHHhhccccccccccCCCCccCCeee--eeccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            356799999999998765443210     111  1235784  22221     122234445556788999999999999


Q ss_pred             HHHHHHHhh
Q psy5301         122 VSTFLTISR  130 (132)
Q Consensus       122 ~~I~~~L~~  130 (132)
                      .+|.++|++
T Consensus       294 ~~I~~~L~~  302 (417)
T PHA02638        294 IKIILKLKQ  302 (417)
T ss_pred             HHHHHHHHH
Confidence            999999976

>PF00001 7tm_1: 7 transmembrane receptor (rhodopsin family) Rhodopsin-like GPCR superfamily signature 5-hydroxytryptamine 7 receptor signature bradykinin receptor signature gastrin receptor signature melatonin receptor signature olfactory receptor signature; InterPro: IPR000276 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=97.31  E-value=0.00044  Score=49.50  Aligned_cols=74  Identities=16%  Similarity=0.229  Sum_probs=50.7

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRT  131 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~~  131 (132)
                      +.++|.++...++|..+..+....++ ++...|.  ...++.. ...+.....++++++|+.++.++|.+|.++++++
T Consensus       105 i~~~w~~~~~~~~~~~~~~~~~~~~~-~~~~~C~--~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~  178 (257)
T PF00001_consen  105 IILIWIISFLISLPPLFFSWVYFVSD-GSQSFCF--IDFSSSS-SQIYFIYFFIVFFILPLIIILICYIRILRKLRRQ  178 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHTCEEEEEST-CCCEEEE--ESCSSSH-HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccc-ccccccc--ccccccc-cccccccccccccccceeeeeeeccccccccccc
Confidence            45688888888888765433333222 2256793  3444333 3455666678889999999999999999988774

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The rhodopsin-like GPCRs themselves represent a widespread protein family that includes hormone, neurotransmitter and light receptors, all of which transduce extracellular signals through interaction with guanine nucleotide-binding (G) proteins. Although their activating ligands vary widely in structure and character, the amino acid sequences of the receptors are very similar and are believed to adopt a common structural framework comprising 7 transmembrane (TM) helices [, , ].; GO: 0007186 G-protein coupled receptor protein signaling pathway, 0016021 integral to membrane; PDB: 2KI9_A 3QAK_A 2YDV_A 3VGA_A 3PWH_A 3RFM_A 3EML_A 3VG9_A 3REY_A 3UZA_A ....

>PHA03087 G protein-coupled chemokine receptor-like protein; Provisional

Probab=97.00  E-value=0.004  Score=47.78  Aligned_cols=71  Identities=17%  Similarity=0.255  Sum_probs=45.7

Q ss_pred             HHhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCCC-h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5301          55 STFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTE-P-WQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISR  130 (132)
Q Consensus        55 ~iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~~-~-~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~  130 (132)
                      .++|.++...++|.+...+...+   .+...|.  ..+++ . .+.....+...++.|++|+.++.++|.+|.+++++
T Consensus       160 ~~iWl~~~~~~~p~~~~~~~~~~---~~~~~C~--~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~i~~~l~~  232 (335)
T PHA03087        160 LVIWIISIIETTPILFVYTTKKD---HETLICC--MFYNNKTMNWKLFINFEINIIGMLIPLTILLYCYSKILITLKG  232 (335)
T ss_pred             HHHHHHHHHHhccHhheeeeecc---CCCceEE--ecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            35688888888898776543322   2334673  23332 1 22223333345677999999999999999998875

>PHA03235 DNA packaging protein UL33; Provisional

Probab=95.81  E-value=0.026  Score=45.14  Aligned_cols=47  Identities=13%  Similarity=0.288  Sum_probs=36.2

Q ss_pred             CceeccccccccChhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy5301          14 DFYQCVTYGFYTEPWQ---EQLYSCFSLFFMFICPLLILVTTYVSTFLTISR   62 (132)
Q Consensus        14 ~~~~Cv~~~~~~~~~~---~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~   62 (132)
                      +...|  ...|+++..   ...|.+..++..|++|+++|++||..|...+.+
T Consensus       184 ~~~~C--~~~~~~~~~~~~~~~y~i~l~i~~f~iPl~im~~~Y~~I~~~l~~  233 (409)
T PHA03235        184 GYETC--VIYFRADQVKTVLSTFKVLLTLVWGIAPVVMMTWFYTFFYRTLKR  233 (409)
T ss_pred             Cccee--eEeCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            45689  666765432   235777778889999999999999999988864

>PHA03234 DNA packaging protein UL33; Provisional

Probab=95.70  E-value=0.029  Score=43.70  Aligned_cols=46  Identities=17%  Similarity=0.194  Sum_probs=32.2

Q ss_pred             ceeccccccccChhhHHHHH---HHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy5301          15 FYQCVTYGFYTEPWQEQLYS---CFSLFFMFICPLLILVTTYVSTFLTISR   62 (132)
Q Consensus        15 ~~~Cv~~~~~~~~~~~~~y~---~~~~~~~y~~Pl~ii~~~y~~iiw~ls~   62 (132)
                      .+.|  .+.||++.....+.   ...++.+|++|+++|++||..|..++.+
T Consensus       178 ~~~C--~~~~~~~~~~~~~~~~~~~~~~~~f~iPl~im~~cY~~I~~~L~~  226 (338)
T PHA03234        178 YGKC--NIHISSKKAYDLFIAIKIVFCFIWGIFPTMIFSFFYVIFCKALHA  226 (338)
T ss_pred             CCcC--cccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3589  88887543222332   2234557899999999999999888854

>KOG4219|consensus

Probab=94.92  E-value=0.021  Score=45.48  Aligned_cols=52  Identities=23%  Similarity=0.287  Sum_probs=42.0

Q ss_pred             CCCCceeccccccccCh--------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q psy5301          11 FIEDFYQCVTYGFYTEP--------WQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRKC   64 (132)
Q Consensus        11 ~~~~~~~Cv~~~~~~~~--------~~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~~   64 (132)
                      +++..++|  .-.||++        .+.+.|.....+++|++|++++..+|+.|..+++...
T Consensus       181 d~~~~~~~--~~~~pe~~~~~~~~~~~~~~y~~vl~~lqYflPliVl~~~Yt~iav~LW~~~  240 (423)
T KOG4219|consen  181 DGESRVVC--VTAWPEHVCPTENESLLMQGYNYVLLFLQYFLPLIVLGLAYTVIAVTLWGRR  240 (423)
T ss_pred             CCcceEEE--EEecccccCCcchhhhhhcceeeeehhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            34456799  7778865        2335599999999999999999999999999998764

>PHA02638 CC chemokine receptor-like protein; Provisional

Probab=93.77  E-value=0.18  Score=40.40  Aligned_cols=46  Identities=15%  Similarity=0.276  Sum_probs=33.9

Q ss_pred             ceeccccccccChh-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy5301          15 FYQCVTYGFYTEPW-----QEQLYSCFSLFFMFICPLLILVTTYVSTFLTISR   62 (132)
Q Consensus        15 ~~~Cv~~~~~~~~~-----~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~   62 (132)
                      ..+|  ...+|.+.     .+..+.+...+.+|++|+++|.+||..+.+++.+
T Consensus       252 ~~~C--~~~~~~~~~~~~~~~~~~~~~~~i~~f~lPl~vmi~cY~~I~~~L~~  302 (417)
T PHA02638        252 NYQC--TLIEDNEKNNISFLGRILQFEINILGMFIPIIIFAFCYIKIILKLKQ  302 (417)
T ss_pred             CCee--eeeccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3589  66666432     1234556667888999999999999999998854

>PHA02834 chemokine receptor-like protein; Provisional

Probab=92.91  E-value=0.36  Score=37.06  Aligned_cols=30  Identities=23%  Similarity=0.457  Sum_probs=25.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy5301          33 YSCFSLFFMFICPLLILVTTYVSTFLTISR   62 (132)
Q Consensus        33 y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~   62 (132)
                      |....++..|++|+++|..||..+.+.+++
T Consensus       189 ~~~~~~i~~f~iPl~ii~~~Y~~I~~~l~~  218 (323)
T PHA02834        189 FNFEINIFGIVIPLIILIYCYSKILYTLKN  218 (323)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            444556889999999999999999988864

>PF00001 7tm_1: 7 transmembrane receptor (rhodopsin family) Rhodopsin-like GPCR superfamily signature 5-hydroxytryptamine 7 receptor signature bradykinin receptor signature gastrin receptor signature melatonin receptor signature olfactory receptor signature; InterPro: IPR000276 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=91.00  E-value=0.58  Score=33.12  Aligned_cols=47  Identities=21%  Similarity=0.490  Sum_probs=39.4

Q ss_pred             ceeccccccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q psy5301          15 FYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRKC   64 (132)
Q Consensus        15 ~~~Cv~~~~~~~~~~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~~   64 (132)
                      ...|  ...++++. ...+....++..+++|++++.++|..+.+.+.+..
T Consensus       133 ~~~C--~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~  179 (257)
T PF00001_consen  133 QSFC--FIDFSSSS-SQIYFIYFFIVFFILPLIIILICYIRILRKLRRQR  179 (257)
T ss_dssp             CEEE--EESCSSSH-HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccc--cccccccc-cccccccccccccccceeeeeeecccccccccccc
Confidence            4689  77776655 56788889999999999999999999999987664

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The rhodopsin-like GPCRs themselves represent a widespread protein family that includes hormone, neurotransmitter and light receptors, all of which transduce extracellular signals through interaction with guanine nucleotide-binding (G) proteins. Although their activating ligands vary widely in structure and character, the amino acid sequences of the receptors are very similar and are believed to adopt a common structural framework comprising 7 transmembrane (TM) helices [, , ].; GO: 0007186 G-protein coupled receptor protein signaling pathway, 0016021 integral to membrane; PDB: 2KI9_A 3QAK_A 2YDV_A 3VGA_A 3PWH_A 3RFM_A 3EML_A 3VG9_A 3REY_A 3UZA_A ....

>KOG4220|consensus

Probab=90.82  E-value=0.13  Score=41.49  Aligned_cols=28  Identities=14%  Similarity=0.237  Sum_probs=23.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5301         104 FSLFFMFICPLLILVTTYVSTFLTISRT  131 (132)
Q Consensus       104 ~~~~~~F~iPl~ii~~cY~~I~~~L~~~  131 (132)
                      -..+..|-+|..||++.|.+|.+.-++|
T Consensus       196 GTAiAAFYlPVtiM~~LY~rIyret~kR  223 (503)
T KOG4220|consen  196 GTAIAAFYLPVTIMTILYWRIYRETRKR  223 (503)
T ss_pred             hHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence            3446678999999999999999887664

>PHA03087 G protein-coupled chemokine receptor-like protein; Provisional

Probab=81.93  E-value=5  Score=30.60  Aligned_cols=46  Identities=20%  Similarity=0.317  Sum_probs=32.0

Q ss_pred             ceeccccccccChh-h-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy5301          15 FYQCVTYGFYTEPW-Q-EQLYSCFSLFFMFICPLLILVTTYVSTFLTISR   62 (132)
Q Consensus        15 ~~~Cv~~~~~~~~~-~-~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~   62 (132)
                      ...|  ...|+++. . +..+.+...+..+++|++++.++|..+.+.+.+
T Consensus       185 ~~~C--~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~i~~~l~~  232 (335)
T PHA03087        185 TLIC--CMFYNNKTMNWKLFINFEINIIGMLIPLTILLYCYSKILITLKG  232 (335)
T ss_pred             CceE--EecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3578  77776332 2 222334456778999999999999999887754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	132
4grv_A	510	Neurotensin receptor type 1, lysozyme chimera; G-p	98.28
3odu_A	502	C-X-C chemokine receptor type 4, lysozyme chimera;	98.1
3vw7_A	484	Proteinase-activated receptor 1, lysozyme; high re	97.99
4dkl_A	464	MU-type opioid receptor, lysozyme chimera; G-prote	97.7
3rze_A	452	Histamine H1 receptor, lysozyme chimera; structura	97.67
3uon_A	467	Human M2 muscarinic acetylcholine, receptor T4 LY	97.54
2ks9_A	364	Substance-P receptor; water, autodock, NK1, neurop	97.43
3v2y_A	520	Sphingosine 1-phosphate receptor 1, lysozyme CHIM;	97.37
4ea3_A	434	Fusion protein of nociceptin receptor and cytochr;	97.36
2z73_A	448	Rhodopsin; visual pigment, GQ-type, G-protein coup	97.25
1u19_A	349	Rhodopsin; G protein-coupled receptor, membrane pr	97.06
3eml_A	488	Human adenosine A2A receptor/T4 lysozyme chimera;	97.06
2rh1_A	500	Beta-2-adrenergic receptor/T4-lysozyme chimera; GP	96.82
3pbl_A	481	D(3) dopamine receptor, lysozyme chimera; structur	96.81
2lnl_A	296	C-X-C chemokine receptor type 1; G protein coupled	96.64
3sn6_R	514	Lysozyme, beta-2 adrenergic receptor; seven transm	96.45
3odu_A	502	C-X-C chemokine receptor type 4, lysozyme chimera;	96.44
4amj_A	315	Beta-1 adrenergic receptor; membrane protein, 7TMR	96.23
4grv_A	510	Neurotensin receptor type 1, lysozyme chimera; G-p	96.05
3vw7_A	484	Proteinase-activated receptor 1, lysozyme; high re	95.9
4eiy_A	447	Adenosine receptor A2A/soluble cytochrome B562 CH;	95.66
2ks9_A	364	Substance-P receptor; water, autodock, NK1, neurop	94.87
4dkl_A	464	MU-type opioid receptor, lysozyme chimera; G-prote	94.79
3v2y_A	520	Sphingosine 1-phosphate receptor 1, lysozyme CHIM;	94.04
3uon_A	467	Human M2 muscarinic acetylcholine, receptor T4 LY	93.9
3rze_A	452	Histamine H1 receptor, lysozyme chimera; structura	93.62
2rh1_A	500	Beta-2-adrenergic receptor/T4-lysozyme chimera; GP	93.07
3eml_A	488	Human adenosine A2A receptor/T4 lysozyme chimera;	91.97
1u19_A	349	Rhodopsin; G protein-coupled receptor, membrane pr	91.59
4ea3_A	434	Fusion protein of nociceptin receptor and cytochr;	91.07
2z73_A	448	Rhodopsin; visual pigment, GQ-type, G-protein coup	91.07
4amj_A	315	Beta-1 adrenergic receptor; membrane protein, 7TMR	89.54
3sn6_R	514	Lysozyme, beta-2 adrenergic receptor; seven transm	88.9
3pbl_A	481	D(3) dopamine receptor, lysozyme chimera; structur	87.44
2lnl_A	296	C-X-C chemokine receptor type 1; G protein coupled	82.43
4eiy_A	447	Adenosine receptor A2A/soluble cytochrome B562 CH;	80.24

>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}

Probab=98.28  E-value=3.9e-06  Score=66.56  Aligned_cols=75  Identities=9%  Similarity=0.124  Sum_probs=54.8

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecCC---ccCceeeeeccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGPF---IEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISR  130 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~  130 (132)
                      +.++|.++...++|.++..+..+...   ..+...|  .+.++... ...|....++++|++|+++|++||.+|.++|++
T Consensus       158 i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~c--~~~~~~~~-~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~  234 (510)
T 4grv_A          158 ISAIWLASALLAIPMLFTMGLQNRSADGTHPGGLVC--TPIVDTAT-VKVVIQVNTFMSFLFPMLVISILNTVIANKLTV  234 (510)
T ss_dssp             HHHHHHHHHHHHTTHHHHEEEEECSSSSCCGGGEEE--EECSCHHH-HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT
T ss_pred             ehHHHHHHHHHHHHHHHhhcccccccCCCCCCcccc--ccccccch-hhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHH
Confidence            56789999999999887666544321   1224567  34444433 456677778889999999999999999999986


Q ss_pred             c
Q psy5301         131 T  131 (132)
Q Consensus       131 ~  131 (132)
                      +
T Consensus       235 ~  235 (510)
T 4grv_A          235 M  235 (510)
T ss_dssp             S
T ss_pred             H
Confidence            4

>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*

Probab=98.10  E-value=3.4e-06  Score=65.73  Aligned_cols=73  Identities=12%  Similarity=0.255  Sum_probs=56.2

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRT  131 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~~  131 (132)
                      +.++|.++...++|.++..+....   .+...|  ...+++......|.+..++++|++|+++|++||.+|.++++++
T Consensus       167 i~~~W~~~~~~~~~~~~~~~~~~~---~~~~~C--~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~  239 (502)
T 3odu_A          167 YVGVWIPALLLTIPDFIFANVSEA---DDRYIC--DRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHS  239 (502)
T ss_dssp             HHHTHHHHHHTTHHHHHHEEEEEC---SSSEEE--EECCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGC
T ss_pred             hhHHHHHHHHHHHHHHHheeeecc---CCceEE--eecCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            456899999999998765554332   245679  4456666666777777788899999999999999999999874

>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}

Probab=97.99  E-value=7.3e-06  Score=63.56  Aligned_cols=75  Identities=16%  Similarity=0.184  Sum_probs=53.0

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTE---PWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISR  130 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~~---~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~  130 (132)
                      +.++|.++...++|.++..+....+ +.+...|.  ..++.   ......|.+..++++|++|+++|++||.+|.+++++
T Consensus       141 i~~~W~~s~~~~~p~~~~~~~~~~~-~~~~~~C~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~  217 (484)
T 3vw7_A          141 CLAIWALAIAGVVPLLLKEQTIQVP-GLGITTCH--DVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSS  217 (484)
T ss_dssp             HHHHHHHHHHHHHHHHTSCCEEEET-TTTEEEES--SSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHHHHhhhccccC-CCCCceee--ccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhH
Confidence            4568999988888887654433322 23456794  34432   233445666677888999999999999999999987


Q ss_pred             c
Q psy5301         131 T  131 (132)
Q Consensus       131 ~  131 (132)
                      +
T Consensus       218 ~  218 (484)
T 3vw7_A          218 S  218 (484)
T ss_dssp             C
T ss_pred             h
Confidence            4

>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*

Probab=97.70  E-value=1.9e-05  Score=60.64  Aligned_cols=73  Identities=19%  Similarity=0.317  Sum_probs=51.5

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCCCh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEP--WQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRT  131 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~~~--~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~~  131 (132)
                      +.++|.++...++|.++..+....   .+...|.  ..++..  .+...+.+..+++.|++|+++|++||.+|.++++++
T Consensus       137 ~~~~W~~~~~~~~p~~~~~~~~~~---~~~~~c~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~  211 (464)
T 4dkl_A          137 NVCNWILSSAIGLPVMFMATTKYR---QGSIDCT--LTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSV  211 (464)
T ss_dssp             HHHHHHHHHHHHHHHHHSBCCEEE---TTEEECC--BCCSSSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHHHheeeccc---CCCceEE--eecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            456899988888888764332222   2446783  333322  334567777788889999999999999999999864

>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}

Probab=97.67  E-value=2.5e-05  Score=59.89  Aligned_cols=73  Identities=10%  Similarity=0.160  Sum_probs=47.2

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRT  131 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~~  131 (132)
                      +.++|.++...++|.+...+........+...|  ...++...   .|.+..++++|++|+++|++||..|.++++++
T Consensus       129 i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~C--~~~~~~~~---~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~  201 (452)
T 3rze_A          129 ILGAWFLSFLWVIPILGWNHFMQQTSVRREDKC--ETDFYDVT---WFKVMTAIINFYLPTLLMLWFYAKIYKAVRQH  201 (452)
T ss_dssp             HHHHHHHHGGGHHHHHCCCC-------CCSSSS--CCSCTTCH---HHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccccccCCCCee--cCCCcccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            456899998889996543222211111234567  33443322   35556678889999999999999999999764

>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*

Probab=97.54  E-value=1.9e-05  Score=60.89  Aligned_cols=73  Identities=11%  Similarity=0.142  Sum_probs=48.6

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRT  131 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~~  131 (132)
                      +.++|.++...++|.++..+........+...|  ...++.   ...+.+..++++|++|+++|++||.+|.++++++
T Consensus       144 i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C--~~~~~~---~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~  216 (467)
T 3uon_A          144 IAAAWVLSFILWAPAILFWQFIVGVRTVEDGEC--YIQFFS---NAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSR  216 (467)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCC--CCGGGG---SHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcccccCCCCCcc--eeecCc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            456888888888887654322211111233468  333322   2346666778889999999999999999999875

>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A

Probab=97.43  E-value=4.5e-05  Score=57.04  Aligned_cols=73  Identities=14%  Similarity=0.194  Sum_probs=49.5

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTE---PWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISR  130 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~~---~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~  130 (132)
                      +.++|.++...++|.+...+...   .++...|.  ..+++   ......|.+..++++|++|++++.+||.+|.+++++
T Consensus       151 i~~~W~~s~~~~~p~~~~~~~~~---~~~~~~C~--~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~  225 (364)
T 2ks9_A          151 ICVIWVLALLLAFPQGYYSTTET---MPSRVVCM--IEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWA  225 (364)
T ss_dssp             HHHHHHHHHHHHTTTTTTSCCCB---CTTCSSBC--CCCSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCS
T ss_pred             HHHHHHHHHHHHhHHHHHhhhee---cCCCCEEe--ecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            45578888888888764322211   12345683  33332   233456777777888999999999999999998876


Q ss_pred             c
Q psy5301         131 T  131 (132)
Q Consensus       131 ~  131 (132)
                      +
T Consensus       226 ~  226 (364)
T 2ks9_A          226 S  226 (364)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*

Probab=97.37  E-value=8.9e-05  Score=58.78  Aligned_cols=68  Identities=16%  Similarity=0.120  Sum_probs=45.7

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRT  131 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~~  131 (132)
                      +.++|.++...++|.++..+..     .+...|  ...++...  ..|.+. ++++|++|+++|++||.+|.++++++
T Consensus       182 i~~~W~~s~~~~~~~~~~~~~~-----~~~~~C--~~~~~~~~--~~~~~~-~~~~~~lPl~ii~~~Y~~I~~~l~~~  249 (520)
T 3v2y_A          182 ISACWVISLILGGLPIMGWNCI-----SALSSC--STVLPLYH--KHYILF-CTTVFTLLLLSIVILYCRIYSLVRTR  249 (520)
T ss_dssp             HHHHHHHHHHHHHTTTTTCBCT-----TCGGGB--CSSSTTBB--HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHeeccc-----cCCCcc--cccCCccc--hHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4568999888887776533321     234579  44444332  234433 34569999999999999999999864

>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*

Probab=97.25  E-value=0.00013  Score=56.28  Aligned_cols=73  Identities=12%  Similarity=0.097  Sum_probs=47.4

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYT-EPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISR  130 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~-~~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~  130 (132)
                      +.++|.++...++|.++..+..+.+  +....|.  ..+. +......+....++++|++|+++|++||.+|.++++|
T Consensus       156 i~~~W~~s~~~~~~~~~~~~~~~~~--~~~~~c~--~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~  229 (448)
T 2z73_A          156 IIFVWLWSVLWAIGPIFGWGAYTLE--GVLCNCS--FDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSN  229 (448)
T ss_dssp             HHHHHHHHHHHHSGGGGTSSCEEEC--TTSSSEE--ECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHH
T ss_pred             HHHHHHHHHHHHHHHHhceeeeeec--CCceeEe--cccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567888888777765533322211  2334573  2332 2233455666677888999999999999999988765

>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...

Probab=97.06  E-value=6.5e-05  Score=55.57  Aligned_cols=74  Identities=16%  Similarity=0.208  Sum_probs=48.6

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYT---EPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISR  130 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~---~~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~  130 (132)
                      +.++|.++...++|.++..+....  +++...|.  ..++   +......|....++++|++|+++|.+||.+|.+++++
T Consensus       158 i~~~W~~~~~~~~~~~~~~~~~~~--~~~~~~C~--~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~  233 (349)
T 1u19_A          158 VAFTWVMALACAAPPLVGWSRYIP--EGMQCSCG--IDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKE  233 (349)
T ss_dssp             HHHHHHHHHHHHSGGGTTSSCCEE--ETTTTEEE--CCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCS
T ss_pred             HHHHHHHHHHHHHHHHHheeeeec--cCCceeec--ccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            455788888888887543221111  12335684  3332   2223456777777888999999999999999988876


Q ss_pred             c
Q psy5301         131 T  131 (132)
Q Consensus       131 ~  131 (132)
                      +
T Consensus       234 ~  234 (349)
T 1u19_A          234 A  234 (349)
T ss_dssp             C
T ss_pred             h
Confidence            3

>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*

Probab=97.06  E-value=8.4e-05  Score=57.41  Aligned_cols=76  Identities=17%  Similarity=0.223  Sum_probs=45.6

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecC--CccCceeeeeccCCC-----ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGP--FIEDFYQCVTYGFYT-----EPWQEQLYSCFSLFFMFICPLLILVTTYVSTFL  126 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~--~~~~~~~C~~~~~~~-----~~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~  126 (132)
                      +.++|.++...++|.++..+.....  ...+...|.  ..+.     +......+....++++|++|+++|++||.+|.+
T Consensus       140 i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~  217 (488)
T 3eml_A          140 IAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCG--EGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFL  217 (488)
T ss_dssp             HHHHHHHHHHHHTTGGGTCCSSCC-------CCSSC--TTCEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccccccccccccccccccc--cccceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            4568988888887776533322111  011223452  2221     111123444455678899999999999999999


Q ss_pred             HHhhc
Q psy5301         127 TISRT  131 (132)
Q Consensus       127 ~L~~~  131 (132)
                      +++++
T Consensus       218 ~l~~~  222 (488)
T 3eml_A          218 AARRQ  222 (488)
T ss_dssp             HHTCC
T ss_pred             HHHHH
Confidence            99874

>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*

Probab=96.82  E-value=8.7e-05  Score=58.44  Aligned_cols=73  Identities=19%  Similarity=0.271  Sum_probs=43.6

Q ss_pred             HHHhhhhhccce-eeeEEEEEeeecCCccCceeeeeccCCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5301          54 VSTFLTISRKCF-MSFMVIFHIEKGPFIEDFYQCVTYGFYT--EPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISR  130 (132)
Q Consensus        54 ~~iiw~ls~~~s-~P~l~~~~~~~~~~~~~~~~C~~~~~~~--~~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~  130 (132)
                      +.++|.++...+ .|.++..... .  ..+...|.  ..+.  +......|.+..++++|++|+++|++||.+|.+++++
T Consensus       161 i~~~W~~s~~~~~~p~~~~~~~~-~--~~~~~~c~--~~~~~~~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~  235 (500)
T 2rh1_A          161 ILMVWIVSGLTSFLPIQMHWYRA-T--HQEAINCY--AEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKR  235 (500)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTCC-C--SHHHHHHH--HCTTCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhcchheeeecc-c--ccCcceec--ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456788887776 4543211111 0  11223452  1111  1111245666677888999999999999999999886


Q ss_pred             c
Q psy5301         131 T  131 (132)
Q Consensus       131 ~  131 (132)
                      +
T Consensus       236 ~  236 (500)
T 2rh1_A          236 Q  236 (500)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}

Probab=96.81  E-value=0.00035  Score=53.97  Aligned_cols=65  Identities=12%  Similarity=0.219  Sum_probs=45.0

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRT  131 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~~  131 (132)
                      +.++|.++...++|.++..+.     ..+...|.  ..+      ..+....++++|++|+++|++||..|.++++++
T Consensus       163 i~~~W~~~~~~~~~~~~~~~~-----~~~~~~C~--~~~------~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~  227 (481)
T 3pbl_A          163 ITAVWVLAFAVSCPLLFGFNT-----TGDPTVCS--ISN------PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQR  227 (481)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCC-----CSSTTCCS--CCC------HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHheecc-----cCCCCccc--ccC------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            456788888888887643221     12334572  221      224555678889999999999999999999874

>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}

Probab=96.64  E-value=0.00014  Score=53.07  Aligned_cols=75  Identities=15%  Similarity=0.129  Sum_probs=46.6

Q ss_pred             HHhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5301          55 STFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRT  131 (132)
Q Consensus        55 ~iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~~  131 (132)
                      ..+|.++...++|.....+..+.+  .+...|.+............+.+..+.++|++|+.++..||.++.++++++
T Consensus       130 ~~~W~~s~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~  204 (296)
T 2lnl_A          130 LGCWGLSMNLSLPFFLFRQAYHPN--NSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKA  204 (296)
T ss_dssp             HHHHHHHHHHHHHHHHTSSCCCCC--TTSCCCCSCCSCCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSC
T ss_pred             hHHHHHHHHHhcchhhcceeecCC--CCCceeeeeccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            447888888888876543332221  122223111111222223456666678899999999999999999888663

>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*

Probab=96.45  E-value=0.00029  Score=55.56  Aligned_cols=32  Identities=34%  Similarity=0.526  Sum_probs=27.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5301          99 QLYSCFSLFFMFICPLLILVTTYVSTFLTISR  130 (132)
Q Consensus        99 ~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~  130 (132)
                      ..|.+..+++.|++|+++|++||.+|.+++++
T Consensus       346 ~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~  377 (514)
T 3sn6_R          346 QAYAIASSIVSFYVPLVIMVFVYSRVFQEAKR  377 (514)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45666677888999999999999999998876

>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*

Probab=96.44  E-value=0.0057  Score=47.36  Aligned_cols=48  Identities=19%  Similarity=0.398  Sum_probs=42.7

Q ss_pred             CceeccccccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q psy5301          14 DFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRK   63 (132)
Q Consensus        14 ~~~~Cv~~~~~~~~~~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~   63 (132)
                      +...|  ...|++......|.+..+++.|++|+++|++||..|.+.+.+.
T Consensus       192 ~~~~C--~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~  239 (502)
T 3odu_A          192 DRYIC--DRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHS  239 (502)
T ss_dssp             SSEEE--EECCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGC
T ss_pred             CceEE--eecCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            45789  8889988888889999999999999999999999999998764

>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*

Probab=96.23  E-value=8.9e-05  Score=53.84  Aligned_cols=76  Identities=14%  Similarity=0.159  Sum_probs=44.2

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecCCccCceeeeeccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGPFIEDFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRT  131 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~~  131 (132)
                      +.++|.++...+.|.++.......  +++...|.......+......|....++++|++|+.+|.++|.+|.++++++
T Consensus       132 i~~~W~~~~~~~~~~~~~~~~~~~--~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~  207 (315)
T 4amj_A          132 ICTVWAISALVSFLPIMMHWWRDE--DPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ  207 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTCCC--SHHHHHHHHCTTCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccc--CCCccccccccccchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            445788887777655432111111  1122345211111111123456666677889999999999999999998764

>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}

Probab=96.05  E-value=0.0097  Score=46.94  Aligned_cols=45  Identities=11%  Similarity=0.160  Sum_probs=36.7

Q ss_pred             ceeccccccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy5301          15 FYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISR   62 (132)
Q Consensus        15 ~~~Cv~~~~~~~~~~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~   62 (132)
                      ...|  .+.|+..+ .+.|.++.+++.|++|+++|+++|..|.+.++.
T Consensus       190 ~~~c--~~~~~~~~-~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~  234 (510)
T 4grv_A          190 GLVC--TPIVDTAT-VKVVIQVNTFMSFLFPMLVISILNTVIANKLTV  234 (510)
T ss_dssp             GEEE--EECSCHHH-HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccc--ccccccch-hhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHH
Confidence            3578  77776544 456778888999999999999999999998864

>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}

Probab=95.90  E-value=0.017  Score=44.45  Aligned_cols=50  Identities=22%  Similarity=0.291  Sum_probs=40.1

Q ss_pred             CCceeccccccccChh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q psy5301          13 EDFYQCVTYGFYTEPW---QEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRKC   64 (132)
Q Consensus        13 ~~~~~Cv~~~~~~~~~---~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~~   64 (132)
                      .+...|  ...|+.+.   ....|.+..+++.|++|+++|++||..|...+.+..
T Consensus       167 ~~~~~C--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~  219 (484)
T 3vw7_A          167 LGITTC--HDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSA  219 (484)
T ss_dssp             TTEEEE--SSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CCCcee--eccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhh
Confidence            355789  88887554   334577778899999999999999999999997654

>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A

Probab=95.66  E-value=0.00048  Score=52.60  Aligned_cols=76  Identities=17%  Similarity=0.231  Sum_probs=42.8

Q ss_pred             HHHhhhhhccceeeeEEEEEeeecCC--ccCceeeeeccCC-----CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5301          54 VSTFLTISRKCFMSFMVIFHIEKGPF--IEDFYQCVTYGFY-----TEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFL  126 (132)
Q Consensus        54 ~~iiw~ls~~~s~P~l~~~~~~~~~~--~~~~~~C~~~~~~-----~~~~~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~  126 (132)
                      +.++|.++...++|.++..+......  ......|.  +.+     .+......+....++++|++|+++|++||.+|.+
T Consensus       150 i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~--~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~  227 (447)
T 4eiy_A          150 IAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCG--EGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFL  227 (447)
T ss_dssp             HHHHHHHHHHHHTGGGGTCSSTTSCCHHHHHHTTCC--TTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHhhhheeccccccCcccccccccc--ccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45679998888887765332211100  00112341  111     1111112333334456789999999999999999


Q ss_pred             HHhhc
Q psy5301         127 TISRT  131 (132)
Q Consensus       127 ~L~~~  131 (132)
                      +++++
T Consensus       228 ~l~~~  232 (447)
T 4eiy_A          228 AARRQ  232 (447)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98874

>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A

Probab=94.87  E-value=0.035  Score=41.07  Aligned_cols=47  Identities=19%  Similarity=0.306  Sum_probs=38.9

Q ss_pred             CceeccccccccCh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy5301          14 DFYQCVTYGFYTEP---WQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISR   62 (132)
Q Consensus        14 ~~~~Cv~~~~~~~~---~~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~   62 (132)
                      +...|  ...|+++   ..++.|.+..++..|++|+++|.++|..+...+.+
T Consensus       176 ~~~~C--~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~  225 (364)
T 2ks9_A          176 SRVVC--MIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWA  225 (364)
T ss_dssp             TCSSB--CCCCSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEE--eecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44679  8888754   34578988899999999999999999999998864

>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*

Probab=94.79  E-value=0.04  Score=41.93  Aligned_cols=48  Identities=25%  Similarity=0.425  Sum_probs=38.8

Q ss_pred             CceeccccccccChh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q psy5301          14 DFYQCVTYGFYTEPW--QEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRK   63 (132)
Q Consensus        14 ~~~~Cv~~~~~~~~~--~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~   63 (132)
                      +...|  ...|+.+.  ....|.+..+++.|++|+++|+++|..|++.+.+.
T Consensus       162 ~~~~c--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~  211 (464)
T 4dkl_A          162 GSIDC--TLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSV  211 (464)
T ss_dssp             TEEEC--CBCCSSSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCC
T ss_pred             CCceE--EeecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44688  77776443  35678889999999999999999999999988654

>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*

Probab=94.04  E-value=0.055  Score=42.64  Aligned_cols=45  Identities=18%  Similarity=0.289  Sum_probs=33.7

Q ss_pred             CceeccccccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q psy5301          14 DFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRK   63 (132)
Q Consensus        14 ~~~~Cv~~~~~~~~~~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~   63 (132)
                      +...|  .+.|+..  ...|.++. ++.|++|+++|++||..|.+.+.+.
T Consensus       205 ~~~~C--~~~~~~~--~~~~~~~~-~~~~~lPl~ii~~~Y~~I~~~l~~~  249 (520)
T 3v2y_A          205 ALSSC--STVLPLY--HKHYILFC-TTVFTLLLLSIVILYCRIYSLVRTR  249 (520)
T ss_dssp             CGGGB--CSSSTTB--BHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcc--cccCCcc--chHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            44589  7777643  34565544 4579999999999999999988754

>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*

Probab=93.90  E-value=0.088  Score=40.09  Aligned_cols=46  Identities=13%  Similarity=0.187  Sum_probs=36.7

Q ss_pred             CceeccccccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q psy5301          14 DFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRKC   64 (132)
Q Consensus        14 ~~~~Cv~~~~~~~~~~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~~   64 (132)
                      +...|  ...|+.   ...|.+..+++.|++|+++|+++|..|.+.+.+..
T Consensus       172 ~~~~C--~~~~~~---~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~  217 (467)
T 3uon_A          172 EDGEC--YIQFFS---NAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRI  217 (467)
T ss_dssp             CSSCC--CCGGGG---SHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCcc--eeecCc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            33578  666653   34688889999999999999999999999987653

>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}

Probab=93.62  E-value=0.079  Score=40.18  Aligned_cols=45  Identities=11%  Similarity=0.304  Sum_probs=36.2

Q ss_pred             CceeccccccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q psy5301          14 DFYQCVTYGFYTEPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRK   63 (132)
Q Consensus        14 ~~~~Cv~~~~~~~~~~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~   63 (132)
                      +...|  ...|+..   ..|.+..+++.|++|+++|+++|..|.+.+.+.
T Consensus       157 ~~~~C--~~~~~~~---~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~  201 (452)
T 3rze_A          157 REDKC--ETDFYDV---TWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQH  201 (452)
T ss_dssp             CSSSS--CCSCTTC---HHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCee--cCCCccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            34578  6666543   458888899999999999999999999998654

>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*

Probab=93.07  E-value=0.071  Score=41.67  Aligned_cols=35  Identities=31%  Similarity=0.504  Sum_probs=30.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q psy5301          29 QEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRK   63 (132)
Q Consensus        29 ~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~   63 (132)
                      ....|.+..+++.|++|+++|++||..|...+.+.
T Consensus       202 ~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~  236 (500)
T 2rh1_A          202 TNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQ  236 (500)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45678889999999999999999999999887653

>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*

Probab=91.97  E-value=0.071  Score=40.78  Aligned_cols=35  Identities=26%  Similarity=0.580  Sum_probs=29.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q psy5301          29 QEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRK   63 (132)
Q Consensus        29 ~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~   63 (132)
                      ....|....+++.|++|+++|+++|..|.+.+.+.
T Consensus       188 ~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~  222 (488)
T 3eml_A          188 PMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQ  222 (488)
T ss_dssp             CHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCC
T ss_pred             cchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34556677789999999999999999999998754

>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...

Probab=91.59  E-value=0.11  Score=37.84  Aligned_cols=46  Identities=17%  Similarity=0.346  Sum_probs=37.0

Q ss_pred             eeccccccccC---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q psy5301          16 YQCVTYGFYTE---PWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRK   63 (132)
Q Consensus        16 ~~Cv~~~~~~~---~~~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~   63 (132)
                      ..|  ...|+.   +...+.|.+..++..+++|+++|.++|..+.+.+.+.
T Consensus       186 ~~C--~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~  234 (349)
T 1u19_A          186 CSC--GIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEA  234 (349)
T ss_dssp             TEE--ECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSC
T ss_pred             eee--cccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            478  777764   3345778888999999999999999999998887643

>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*

Probab=91.07  E-value=0.25  Score=37.73  Aligned_cols=47  Identities=17%  Similarity=0.305  Sum_probs=37.3

Q ss_pred             ceeccccccccC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q psy5301          15 FYQCVTYGFYTE-PWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRK   63 (132)
Q Consensus        15 ~~~Cv~~~~~~~-~~~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~   63 (132)
                      ...|  ...|.+ +.....|.+..+++.+++|+++|+++|..|.+.+.+.
T Consensus       183 ~~~c--~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~  230 (448)
T 2z73_A          183 LCNC--SFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNH  230 (448)
T ss_dssp             SSSE--EECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHH
T ss_pred             ceeE--ecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3468  666653 4456778888889999999999999999999988653

>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*

Probab=89.54  E-value=0.19  Score=35.90  Aligned_cols=46  Identities=20%  Similarity=0.340  Sum_probs=35.5

Q ss_pred             eecccccccc--ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q psy5301          16 YQCVTYGFYT--EPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRK   63 (132)
Q Consensus        16 ~~Cv~~~~~~--~~~~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~   63 (132)
                      ..|  ...++  +....+.|....++..+++|+++|.++|..+.+.+.+.
T Consensus       160 ~~c--~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~  207 (315)
T 4amj_A          160 LKC--YQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ  207 (315)
T ss_dssp             HHH--HHCTTCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred             ccc--ccccccchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            356  44443  23345778888999999999999999999999988754

>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*

Probab=88.90  E-value=0.34  Score=37.86  Aligned_cols=35  Identities=31%  Similarity=0.504  Sum_probs=30.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q psy5301          29 QEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRK   63 (132)
Q Consensus        29 ~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~   63 (132)
                      ....|.+..+++.|++|+++|+++|..+.+.+.+.
T Consensus       344 ~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~  378 (514)
T 3sn6_R          344 TNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQ  378 (514)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            45678899999999999999999999999888653

>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}

Probab=87.44  E-value=0.56  Score=35.75  Aligned_cols=32  Identities=16%  Similarity=0.397  Sum_probs=28.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q psy5301          32 LYSCFSLFFMFICPLLILVTTYVSTFLTISRK   63 (132)
Q Consensus        32 ~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~   63 (132)
                      .|.++.+++.|++|+++|+++|..|.+.+.+.
T Consensus       196 ~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~  227 (481)
T 3pbl_A          196 DFVIYSSVVSFYLPFGVTVLVYARIYVVLKQR  227 (481)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            47788899999999999999999999988754

>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}

Probab=82.43  E-value=1.1  Score=31.89  Aligned_cols=36  Identities=22%  Similarity=0.296  Sum_probs=29.3

Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy5301          26 EPWQEQLYSCFSLFFMFICPLLILVTTYVSTFLTIS   61 (132)
Q Consensus        26 ~~~~~~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls   61 (132)
                      .......|.+..+...+++|+.++..+|..+...+.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~  202 (296)
T 2lnl_A          167 TAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLF  202 (296)
T ss_dssp             TTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSS
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334456788889999999999999999998877654

>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A

Probab=80.24  E-value=0.21  Score=37.77  Aligned_cols=33  Identities=27%  Similarity=0.637  Sum_probs=27.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q psy5301          31 QLYSCFSLFFMFICPLLILVTTYVSTFLTISRK   63 (132)
Q Consensus        31 ~~y~~~~~~~~y~~Pl~ii~~~y~~iiw~ls~~   63 (132)
                      ..|....+++.|++|+++|+++|..|.+.+.+.
T Consensus       200 ~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~  232 (447)
T 4eiy_A          200 NYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQ  232 (447)
T ss_dssp             HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            445555677889999999999999999988764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	132
d1u19a_	348	Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}	93.36

>d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Family A G protein-coupled receptor-like
superfamily: Family A G protein-coupled receptor-like
family: Rhodopsin-like
domain: Rhodopsin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.36  E-value=0.006  Score=43.13  Aligned_cols=35  Identities=17%  Similarity=0.464  Sum_probs=28.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5301          97 QEQLYSCFSLFFMFICPLLILVTTYVSTFLTISRT  131 (132)
Q Consensus        97 ~~~~~~~~~~~~~F~iPl~ii~~cY~~I~~~L~~~  131 (132)
                      ....+.+..+...+++|+.++.++|.+|.++++++
T Consensus       199 ~~~~~~~~~~~~~~~ip~~i~~~~y~~i~~~~~~~  233 (348)
T d1u19a_         199 NNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEA  233 (348)
T ss_dssp             THHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSC
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            34566666777888999999999999998887653