Psyllid ID: psy53


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------
MDIYFNQLRENIVRGQPPDKQASMVQWFENLMNSIERNLLTKNRDRFTQNLSMFRRDINDSLKGPNMNSSCTANDMMT
cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccccccc
cccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccHccHHHHHHHHHHHHHHHHHHHccccccccccHccccc
MDIYFNQLREnivrgqppdkqASMVQWFENLMNSIERNLLTKNRDRFTQNLSMFRRDindslkgpnmnssctandmmt
MDIYFNQLrenivrgqppdkQASMVQWFENLMNSIERNLLTKNRDRFTQNLSMFrrdindslkgpnmnssctandmmt
MDIYFNQLRENIVRGQPPDKQASMVQWFENLMNSIERNLLTKNRDRFTQNLSMFRRDINDSLKGPNMNSSCTANDMMT
***********************MVQWFENLMNSIERNLLTK************************************
*DIYFNQLRE***************QWFENLMNSIERNLLTKNRDRFTQNLSMFRRDIN*******************
MDIYFNQLRENIVRGQPPDKQASMVQWFENLMNSIERNLLTKNRDRFTQNLSMFRRDINDSLKGPNMNSSCTANDMMT
MDIYFNQLRENIVRGQPPDKQASMVQWFENLMNSIERNLLTKNRDRFTQNLSMFRRDINDSLKG**************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDIYFNQLRENIVRGQPPDKQASMVQWFENLMNSIERNLLTKNRDRFTQNLSMFRRDINDSLKGPNMNSSCTANDMMT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query78 2.2.26 [Sep-21-2011]
Q5R9G41087 Exportin-7 OS=Pongo abeli yes N/A 0.935 0.067 0.626 4e-19
Q9EPK71087 Exportin-7 OS=Mus musculu yes N/A 0.935 0.067 0.626 4e-19
Q9UIA91087 Exportin-7 OS=Homo sapien yes N/A 0.935 0.067 0.626 4e-19
Q704U01087 Exportin-7-A OS=Xenopus l N/A N/A 0.910 0.065 0.623 5e-19
Q569Z21087 Exportin-7-B OS=Xenopus l N/A N/A 0.910 0.065 0.623 6e-19
Q5ZLT01087 Exportin-7 OS=Gallus gall yes N/A 0.935 0.067 0.626 7e-19
Q9H2T71088 Ran-binding protein 17 OS no N/A 0.948 0.068 0.48 3e-14
Q99NF81088 Ran-binding protein 17 OS no N/A 0.948 0.068 0.466 1e-13
Q9GQN01098 Ran-binding protein 16 OS yes N/A 0.705 0.050 0.509 3e-12
>sp|Q5R9G4|XPO7_PONAB Exportin-7 OS=Pongo abelii GN=XPO7 PE=2 SV=3 Back     alignment and function desciption
 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 47/75 (62%), Positives = 56/75 (74%), Gaps = 2/75 (2%)

Query: 4    YFNQLRENIVRGQPPDKQASMVQWFENLMNSIERNLLTKNRDRFTQNLSMFRRDINDSLK 63
            YF+ LR +IV  QPP+KQ +M   FENLM  IERNLLTKNRDRFTQNLS FRR++NDS+K
Sbjct: 1015 YFSDLRNSIVNSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREVNDSMK 1074

Query: 64   GPNMNSSCTANDMMT 78
              N      +NDMM+
Sbjct: 1075 --NSTYGVNSNDMMS 1087




Mediates the nuclear export of proteins (cargos) with broad substrate specificity. In the nucleus binds cooperatively to its cargo and to the GTPase Ran in its active GTP-bound form. Docking of this trimeric complex to the nuclear pore complex (NPC) is mediated through binding to nucleoporins. Upon transit of a nuclear export complex into the cytoplasm, disassembling of the complex and hydrolysis of Ran-GTP to Ran-GDP (induced by RANBP1 and RANGAP1, respectively) cause release of the cargo from the export receptor. XPO7 then return to the nuclear compartment and mediate another round of transport. The directionality of nuclear export is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus.
Pongo abelii (taxid: 9601)
>sp|Q9EPK7|XPO7_MOUSE Exportin-7 OS=Mus musculus GN=Xpo7 PE=2 SV=3 Back     alignment and function description
>sp|Q9UIA9|XPO7_HUMAN Exportin-7 OS=Homo sapiens GN=XPO7 PE=1 SV=3 Back     alignment and function description
>sp|Q704U0|XPO7A_XENLA Exportin-7-A OS=Xenopus laevis GN=xpo7-a PE=1 SV=1 Back     alignment and function description
>sp|Q569Z2|XPO7B_XENLA Exportin-7-B OS=Xenopus laevis GN=xpo7-b PE=2 SV=1 Back     alignment and function description
>sp|Q5ZLT0|XPO7_CHICK Exportin-7 OS=Gallus gallus GN=XPO7 PE=2 SV=1 Back     alignment and function description
>sp|Q9H2T7|RBP17_HUMAN Ran-binding protein 17 OS=Homo sapiens GN=RANBP17 PE=2 SV=1 Back     alignment and function description
>sp|Q99NF8|RBP17_MOUSE Ran-binding protein 17 OS=Mus musculus GN=Ranbp17 PE=2 SV=1 Back     alignment and function description
>sp|Q9GQN0|RBP16_DROME Ran-binding protein 16 OS=Drosophila melanogaster GN=Ranbp16 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query78
270002549 1099 hypothetical protein TcasGA2_TC004857 [T 0.948 0.067 0.84 1e-30
189234165 1128 PREDICTED: similar to exportin 7 [Tribol 0.948 0.065 0.84 1e-30
156538465 1100 PREDICTED: exportin-7-like isoform 1 [Na 0.961 0.068 0.84 5e-30
332018484 1101 Exportin-7 [Acromyrmex echinatior] 0.935 0.066 0.826 7e-29
307168015 353 Exportin-7 [Camponotus floridanus] 0.935 0.206 0.813 4e-28
307203812162 Exportin-7-A [Harpegnathos saltator] 0.948 0.456 0.786 3e-27
380024615 1100 PREDICTED: LOW QUALITY PROTEIN: exportin 0.948 0.067 0.773 2e-26
328783491 1100 PREDICTED: exportin-7 [Apis mellifera] 0.948 0.067 0.773 2e-26
383866310 1095 PREDICTED: exportin-7-like [Megachile ro 0.935 0.066 0.770 1e-25
340725844 1096 PREDICTED: exportin-7-like [Bombus terre 0.948 0.067 0.746 7e-25
>gi|270002549|gb|EEZ98996.1| hypothetical protein TcasGA2_TC004857 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/75 (84%), Positives = 72/75 (96%), Gaps = 1/75 (1%)

Query: 4    YFNQLRENIVRGQPPDKQASMVQWFENLMNSIERNLLTKNRDRFTQNLSMFRRDINDSLK 63
            YFNQ+RENI+R QPPDKQA+MVQWFENLM+ IERNLLTKNRD+FTQNLSMFRRDINDSLK
Sbjct: 1025 YFNQMRENIIRSQPPDKQAAMVQWFENLMDGIERNLLTKNRDKFTQNLSMFRRDINDSLK 1084

Query: 64   GPNMNSSCTANDMMT 78
            GPN+N+S +A+DMMT
Sbjct: 1085 GPNVNTS-SASDMMT 1098




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234165|ref|XP_967312.2| PREDICTED: similar to exportin 7 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|156538465|ref|XP_001606586.1| PREDICTED: exportin-7-like isoform 1 [Nasonia vitripennis] gi|345491581|ref|XP_003426649.1| PREDICTED: exportin-7-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|332018484|gb|EGI59074.1| Exportin-7 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307168015|gb|EFN61343.1| Exportin-7 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|307203812|gb|EFN82748.1| Exportin-7-A [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|380024615|ref|XP_003696089.1| PREDICTED: LOW QUALITY PROTEIN: exportin-7-like [Apis florea] Back     alignment and taxonomy information
>gi|328783491|ref|XP_397078.3| PREDICTED: exportin-7 [Apis mellifera] Back     alignment and taxonomy information
>gi|383866310|ref|XP_003708613.1| PREDICTED: exportin-7-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|340725844|ref|XP_003401275.1| PREDICTED: exportin-7-like [Bombus terrestris] gi|350397050|ref|XP_003484753.1| PREDICTED: exportin-7-like [Bombus impatiens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query78
UNIPROTKB|A1A4I81087 XPO7 "Uncharacterized protein" 0.935 0.067 0.626 2.1e-18
UNIPROTKB|E2RH141087 XPO7 "Uncharacterized protein" 0.935 0.067 0.626 2.1e-18
UNIPROTKB|Q9UIA91087 XPO7 "Exportin-7" [Homo sapien 0.935 0.067 0.626 2.1e-18
MGI|MGI:19297051087 Xpo7 "exportin 7" [Mus musculu 0.935 0.067 0.626 2.1e-18
UNIPROTKB|E7ESC61088 XPO7 "Exportin-7" [Homo sapien 0.935 0.067 0.626 2.1e-18
UNIPROTKB|F1RMC31089 XPO7 "Uncharacterized protein" 0.935 0.067 0.626 2.1e-18
UNIPROTKB|I3LJC41089 XPO7 "Uncharacterized protein" 0.935 0.067 0.626 2.1e-18
UNIPROTKB|F1LQM91089 F1LQM9 "Uncharacterized protei 0.935 0.067 0.626 2.1e-18
UNIPROTKB|E9PEN81096 XPO7 "Exportin-7" [Homo sapien 0.935 0.066 0.626 2.2e-18
ZFIN|ZDB-GENE-060628-21090 xpo7 "exportin 7" [Danio rerio 0.935 0.066 0.626 2.7e-18
UNIPROTKB|A1A4I8 XPO7 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 235 (87.8 bits), Expect = 2.1e-18, P = 2.1e-18
 Identities = 47/75 (62%), Positives = 56/75 (74%)

Query:     4 YFNQLRENIVRGQPPDKQASMVQWFENLMNSIERNLLTKNRDRFTQNLSMFRRDINDSLK 63
             YF+ LR +IV  QPP+KQ +M   FENLM  IERNLLTKNRDRFTQNLS FRR++NDS+K
Sbjct:  1015 YFSDLRNSIVNSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSAFRREVNDSMK 1074

Query:    64 GPNMNSSCTANDMMT 78
               N      +NDMM+
Sbjct:  1075 --NSTYGVNSNDMMS 1087




GO:0005737 "cytoplasm" evidence=IEA
GO:0005643 "nuclear pore" evidence=IEA
GO:0005049 "nuclear export signal receptor activity" evidence=IEA
UNIPROTKB|E2RH14 XPO7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9UIA9 XPO7 "Exportin-7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1929705 Xpo7 "exportin 7" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E7ESC6 XPO7 "Exportin-7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RMC3 XPO7 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|I3LJC4 XPO7 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1LQM9 F1LQM9 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E9PEN8 XPO7 "Exportin-7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060628-2 xpo7 "exportin 7" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9GQN0RBP16_DROMENo assigned EC number0.50900.70510.0500yesN/A
Q9EPK7XPO7_MOUSENo assigned EC number0.62660.93580.0671yesN/A
Q5ZLT0XPO7_CHICKNo assigned EC number0.62660.93580.0671yesN/A
Q9UIA9XPO7_HUMANNo assigned EC number0.62660.93580.0671yesN/A
Q5R9G4XPO7_PONABNo assigned EC number0.62660.93580.0671yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 78
KOG1410|consensus1082 99.95
KOG4541|consensus748 95.3
PF0885837 IDEAL: IDEAL domain; InterPro: IPR014957 This entr 80.38
>KOG1410|consensus Back     alignment and domain information
Probab=99.95  E-value=2.7e-28  Score=205.17  Aligned_cols=76  Identities=50%  Similarity=0.774  Sum_probs=73.4

Q ss_pred             hHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHhhhhcccchhhhhhhhHHHHHHHHHHhcCCCCCCCCCCcccccC
Q psy53             2 DIYFNQLRENIVRGQPPDKQASMVQWFENLMNSIERNLLTKNRDRFTQNLSMFRRDINDSLKGPNMNSSCTANDMMT   78 (78)
Q Consensus         2 e~~f~~lk~~li~sQp~ekq~~l~~~F~~LM~gIe~nL~~kNRDrFTQNLs~FRrdvr~~lk~~~~~~~~~~~~~m~   78 (78)
                      |+||+.+|++|++|||+||||.+.+||++||+|||+||++||||||||||+.|||||+..|||...+++ +++|||+
T Consensus      1007 E~~fSdlk~~l~ssQp~dkqq~l~~cF~~LM~~ve~nL~~KNrD~FTQNLt~FRrdv~~~lk~~~~~~~-~s~d~~~ 1082 (1082)
T KOG1410|consen 1007 EKYFSDLKASLTSSQPYDKQQDLDMCFTNLMEGVERNLTVKNRDRFTQNLTRFRRDVALVLKGQALPSS-SSVDMMS 1082 (1082)
T ss_pred             HHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHhccCCCCCC-ccccccC
Confidence            899999999999999999999999999999999999999999999999999999999999999977677 8899986



>KOG4541|consensus Back     alignment and domain information
>PF08858 IDEAL: IDEAL domain; InterPro: IPR014957 This entry represents the C-terminal domain of Bacteriophage SPP1, p90 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00